Query 040557
Match_columns 407
No_of_seqs 373 out of 3452
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 09:35:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040557.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040557hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.2E-60 2.5E-65 447.5 27.9 288 68-358 61-352 (361)
2 KOG0192 Tyrosine kinase specif 100.0 1.3E-51 2.8E-56 383.7 22.4 256 85-360 44-305 (362)
3 KOG0581 Mitogen-activated prot 100.0 7.5E-52 1.6E-56 367.9 19.4 257 83-359 80-340 (364)
4 KOG0575 Polo-like serine/threo 100.0 4.5E-51 9.9E-56 383.0 20.5 253 82-358 18-273 (592)
5 KOG0197 Tyrosine kinases [Sign 100.0 3.7E-50 7.9E-55 373.0 19.2 251 87-359 211-462 (468)
6 KOG0615 Serine/threonine prote 100.0 2E-50 4.2E-55 361.6 15.4 259 80-358 170-441 (475)
7 KOG0595 Serine/threonine-prote 100.0 3E-49 6.5E-54 354.3 21.3 203 82-291 10-220 (429)
8 KOG1026 Nerve growth factor re 100.0 3.4E-49 7.5E-54 383.9 14.1 257 82-358 486-762 (774)
9 KOG0591 NIMA (never in mitosis 100.0 5E-50 1.1E-54 342.4 5.3 258 82-356 19-283 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 5.3E-48 1.2E-52 343.2 13.1 253 81-356 24-283 (357)
11 KOG0198 MEKK and related serin 100.0 4.6E-47 1E-51 342.8 16.7 260 81-360 16-282 (313)
12 KOG0582 Ste20-like serine/thre 100.0 2.6E-46 5.6E-51 338.2 17.8 268 81-359 25-298 (516)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 9E-48 2E-52 367.7 8.7 257 84-361 631-894 (996)
14 KOG0593 Predicted protein kina 100.0 2E-46 4.3E-51 323.4 14.7 268 82-356 2-286 (396)
15 KOG0661 MAPK related serine/th 100.0 1.4E-46 2.9E-51 342.5 11.7 268 80-360 8-297 (538)
16 KOG0578 p21-activated serine/t 100.0 2.6E-46 5.7E-51 348.2 13.8 253 82-357 273-526 (550)
17 KOG1095 Protein tyrosine kinas 100.0 7.8E-46 1.7E-50 372.8 17.4 261 81-361 691-964 (1025)
18 KOG0583 Serine/threonine prote 100.0 1E-44 2.2E-49 340.6 22.8 256 80-359 15-280 (370)
19 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.3E-45 9.3E-50 345.0 19.6 260 81-359 6-335 (338)
20 KOG0600 Cdc2-related protein k 100.0 1.9E-45 4E-50 337.4 15.6 266 82-357 117-403 (560)
21 KOG0592 3-phosphoinositide-dep 100.0 1.6E-45 3.4E-50 340.6 14.6 258 78-358 69-342 (604)
22 KOG0201 Serine/threonine prote 100.0 2.5E-46 5.5E-51 338.0 7.8 251 82-355 13-264 (467)
23 KOG4721 Serine/threonine prote 100.0 7.1E-46 1.5E-50 343.5 10.9 238 87-356 129-366 (904)
24 KOG0193 Serine/threonine prote 100.0 2.7E-45 5.8E-50 342.9 14.2 266 75-360 385-655 (678)
25 KOG0659 Cdk activating kinase 100.0 8.9E-45 1.9E-49 308.0 16.1 276 82-367 2-293 (318)
26 KOG0194 Protein tyrosine kinas 100.0 3.7E-45 7.9E-50 344.9 14.4 261 80-362 155-424 (474)
27 KOG0588 Serine/threonine prote 100.0 8.1E-45 1.8E-49 342.6 16.5 255 82-361 12-270 (786)
28 KOG1094 Discoidin domain recep 100.0 6.9E-45 1.5E-49 338.0 15.6 264 81-357 537-803 (807)
29 cd05631 STKc_GRK4 Catalytic do 100.0 4.4E-44 9.6E-49 329.9 20.8 256 83-357 1-264 (285)
30 KOG0597 Serine-threonine prote 100.0 1.9E-45 4E-50 340.8 11.2 249 82-355 2-252 (808)
31 KOG0616 cAMP-dependent protein 100.0 5.6E-45 1.2E-49 313.6 13.0 250 82-358 44-301 (355)
32 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-43 3.3E-48 329.4 21.9 262 82-356 5-303 (304)
33 cd05571 STKc_PKB Catalytic dom 100.0 7.1E-44 1.5E-48 334.3 19.5 247 88-358 1-255 (323)
34 PTZ00263 protein kinase A cata 100.0 1.3E-43 2.9E-48 333.2 20.3 251 82-359 18-276 (329)
35 KOG0605 NDR and related serine 100.0 1.2E-43 2.6E-48 328.1 18.7 259 80-358 139-449 (550)
36 PHA02988 hypothetical protein; 100.0 2E-43 4.4E-48 325.0 20.0 245 88-358 26-279 (283)
37 cd05614 STKc_MSK2_N N-terminal 100.0 1.9E-43 4.1E-48 332.9 20.3 257 83-358 1-271 (332)
38 cd05104 PTKc_Kit Catalytic dom 100.0 7.3E-44 1.6E-48 340.6 17.7 257 82-357 35-373 (375)
39 cd07848 STKc_CDKL5 Catalytic d 100.0 2E-43 4.3E-48 325.9 19.3 270 82-356 1-286 (287)
40 cd05612 STKc_PRKX_like Catalyt 100.0 5.9E-44 1.3E-48 330.0 15.5 250 82-358 1-258 (291)
41 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.4E-43 5.2E-48 321.8 19.3 255 82-357 5-264 (266)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 1.1E-43 2.3E-48 334.3 17.1 268 81-358 4-305 (331)
43 KOG0611 Predicted serine/threo 100.0 1.4E-44 3.1E-49 322.9 10.5 251 82-358 53-307 (668)
44 cd05106 PTKc_CSF-1R Catalytic 100.0 1.3E-43 2.8E-48 338.5 16.8 259 81-358 37-372 (374)
45 PLN00113 leucine-rich repeat r 100.0 4.5E-42 9.8E-47 366.4 30.3 264 80-360 688-953 (968)
46 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.6E-43 5.7E-48 332.0 18.1 258 82-358 1-261 (333)
47 KOG0589 Serine/threonine prote 100.0 5.3E-44 1.2E-48 330.9 12.7 253 82-355 4-259 (426)
48 KOG0580 Serine/threonine prote 100.0 5.5E-44 1.2E-48 298.9 10.7 252 82-357 22-276 (281)
49 KOG3653 Transforming growth fa 100.0 3.3E-43 7.1E-48 320.1 16.6 267 82-360 210-505 (534)
50 cd05072 PTKc_Lyn Catalytic dom 100.0 6.3E-43 1.4E-47 318.0 18.5 254 82-357 6-260 (261)
51 KOG1989 ARK protein kinase fam 100.0 5.4E-43 1.2E-47 342.2 19.0 267 81-369 36-322 (738)
52 cd05595 STKc_PKB_beta Catalyti 100.0 4.9E-43 1.1E-47 328.5 18.0 247 88-358 1-255 (323)
53 PF07714 Pkinase_Tyr: Protein 100.0 9.5E-44 2.1E-48 323.0 12.7 249 87-355 4-259 (259)
54 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-42 2.9E-47 315.0 20.0 251 82-355 4-255 (256)
55 cd05048 PTKc_Ror Catalytic Dom 100.0 1.4E-42 3E-47 319.5 20.4 256 82-357 5-282 (283)
56 PTZ00426 cAMP-dependent protei 100.0 4.4E-43 9.5E-48 330.6 16.9 250 82-358 30-288 (340)
57 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.1E-43 8.9E-48 326.4 16.5 267 81-358 4-292 (303)
58 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.2E-43 7E-48 324.7 15.5 266 82-356 5-287 (288)
59 KOG4257 Focal adhesion tyrosin 100.0 2.3E-43 5.1E-48 329.9 14.4 256 83-360 390-651 (974)
60 PLN00034 mitogen-activated pro 100.0 1.4E-42 3.1E-47 329.6 19.9 254 82-359 74-333 (353)
61 cd05626 STKc_LATS2 Catalytic d 100.0 2E-42 4.2E-47 331.8 20.7 257 83-358 2-309 (381)
62 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-42 2.7E-47 333.3 19.4 260 80-358 35-397 (400)
63 cd05593 STKc_PKB_gamma Catalyt 100.0 9E-43 2E-47 327.4 18.0 247 88-358 1-255 (328)
64 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-42 2.4E-47 326.4 18.4 250 84-358 1-261 (324)
65 cd05584 STKc_p70S6K Catalytic 100.0 2.3E-42 5.1E-47 324.0 20.5 247 88-358 2-260 (323)
66 cd05601 STKc_CRIK Catalytic do 100.0 9.7E-43 2.1E-47 327.8 17.9 258 82-358 1-267 (330)
67 cd05585 STKc_YPK1_like Catalyt 100.0 1.5E-42 3.3E-47 323.8 19.1 245 90-358 1-251 (312)
68 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-42 3.1E-47 329.3 19.2 257 82-358 1-289 (350)
69 cd05605 STKc_GRK4_like Catalyt 100.0 2.3E-42 5E-47 318.5 20.0 257 83-358 1-265 (285)
70 cd05599 STKc_NDR_like Catalyti 100.0 1.8E-42 3.8E-47 330.4 19.7 257 82-358 1-300 (364)
71 cd05582 STKc_RSK_N N-terminal 100.0 5.9E-43 1.3E-47 327.5 16.1 246 88-357 2-257 (318)
72 cd05033 PTKc_EphR Catalytic do 100.0 1.7E-42 3.8E-47 316.1 18.4 256 82-358 4-265 (266)
73 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-42 2.9E-47 320.9 17.9 263 82-356 1-289 (290)
74 cd05629 STKc_NDR_like_fungal C 100.0 3.7E-42 8E-47 329.6 21.1 257 82-358 1-309 (377)
75 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-42 2.6E-47 316.5 16.6 267 72-360 87-378 (576)
76 cd06650 PKc_MEK1 Catalytic dom 100.0 2.6E-42 5.7E-47 324.9 19.7 267 81-358 4-303 (333)
77 cd05588 STKc_aPKC Catalytic do 100.0 3.2E-42 6.9E-47 323.9 20.2 254 88-358 1-266 (329)
78 cd05068 PTKc_Frk_like Catalyti 100.0 1.8E-42 3.9E-47 315.0 17.9 255 81-357 5-260 (261)
79 KOG0694 Serine/threonine prote 100.0 8.9E-43 1.9E-47 331.0 16.1 250 80-354 366-624 (694)
80 KOG2052 Activin A type IB rece 100.0 4.2E-42 9E-47 310.8 19.1 273 73-359 202-504 (513)
81 cd05052 PTKc_Abl Catalytic dom 100.0 2.3E-42 4.9E-47 314.8 17.7 254 82-357 6-261 (263)
82 PHA03212 serine/threonine kina 100.0 3E-42 6.4E-47 330.4 19.3 264 82-358 92-380 (391)
83 cd05618 STKc_aPKC_iota Catalyt 100.0 6.7E-42 1.4E-46 321.6 20.8 253 88-357 1-265 (329)
84 cd05054 PTKc_VEGFR Catalytic d 100.0 1.9E-42 4.1E-47 326.2 17.1 260 81-359 6-334 (337)
85 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.7E-42 5.9E-47 313.8 17.6 256 80-357 4-260 (261)
86 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.3E-42 9.3E-47 311.7 18.7 252 82-356 4-256 (256)
87 cd05108 PTKc_EGFR Catalytic do 100.0 5.3E-42 1.1E-46 320.8 19.5 256 82-359 7-269 (316)
88 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.3E-42 9.4E-47 324.4 18.9 271 83-359 1-295 (338)
89 KOG0663 Protein kinase PITSLRE 100.0 1.7E-42 3.7E-47 302.8 14.5 273 82-367 76-373 (419)
90 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-42 3.3E-47 325.7 15.1 247 88-358 1-256 (325)
91 cd05597 STKc_DMPK_like Catalyt 100.0 3.6E-41 7.8E-46 317.0 24.0 260 82-358 1-270 (331)
92 cd05049 PTKc_Trk Catalytic dom 100.0 8.9E-42 1.9E-46 313.6 19.4 255 82-356 5-279 (280)
93 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-41 2.8E-46 318.0 20.7 246 88-357 1-251 (316)
94 KOG0660 Mitogen-activated prot 100.0 4.8E-42 1E-46 304.1 16.7 275 80-360 20-316 (359)
95 cd06619 PKc_MKK5 Catalytic dom 100.0 1.8E-41 3.9E-46 311.6 21.2 256 83-359 2-258 (279)
96 cd05598 STKc_LATS Catalytic do 100.0 9.8E-42 2.1E-46 326.6 20.2 257 82-358 1-305 (376)
97 cd05090 PTKc_Ror1 Catalytic do 100.0 7.7E-42 1.7E-46 314.7 18.7 255 82-356 5-281 (283)
98 cd05062 PTKc_IGF-1R Catalytic 100.0 9.3E-42 2E-46 313.1 19.2 257 80-356 4-276 (277)
99 cd05596 STKc_ROCK Catalytic do 100.0 7.5E-42 1.6E-46 326.1 19.2 258 81-358 42-308 (370)
100 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.4E-41 2.9E-46 319.3 20.5 254 88-358 1-264 (327)
101 cd05059 PTKc_Tec_like Catalyti 100.0 4.3E-42 9.3E-47 311.7 16.5 251 82-355 4-255 (256)
102 cd05624 STKc_MRCK_beta Catalyt 100.0 1.5E-41 3.2E-46 319.7 20.7 260 82-358 1-270 (331)
103 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-41 5.7E-46 322.0 22.5 260 80-359 41-309 (370)
104 cd08228 STKc_Nek6 Catalytic do 100.0 1.6E-41 3.5E-46 309.8 20.1 259 82-358 2-265 (267)
105 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.9E-42 1.9E-46 314.3 18.6 266 85-358 7-281 (283)
106 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-41 2.4E-46 309.7 18.9 253 81-356 5-258 (260)
107 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.5E-42 2.1E-46 310.1 18.3 253 82-357 6-259 (260)
108 KOG4278 Protein tyrosine kinas 100.0 4.7E-43 1E-47 327.7 9.8 261 77-358 262-523 (1157)
109 cd05623 STKc_MRCK_alpha Cataly 100.0 2.4E-41 5.2E-46 318.4 21.5 260 82-358 1-270 (332)
110 cd05628 STKc_NDR1 Catalytic do 100.0 2.9E-41 6.3E-46 321.7 22.1 258 82-358 1-297 (363)
111 KOG2345 Serine/threonine prote 100.0 1.6E-42 3.5E-47 291.4 11.8 263 79-358 18-300 (302)
112 cd05053 PTKc_FGFR Catalytic do 100.0 2.2E-41 4.8E-46 313.2 20.6 258 81-358 11-291 (293)
113 cd05591 STKc_nPKC_epsilon Cata 100.0 9.4E-42 2E-46 319.7 18.2 246 88-357 1-257 (321)
114 cd05071 PTKc_Src Catalytic dom 100.0 2.2E-41 4.8E-46 308.1 20.1 253 82-357 6-259 (262)
115 cd05590 STKc_nPKC_eta Catalyti 100.0 6.7E-42 1.5E-46 320.4 17.0 247 88-358 1-257 (320)
116 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-41 2.9E-46 307.6 18.2 248 88-356 1-251 (252)
117 cd05575 STKc_SGK Catalytic dom 100.0 2.2E-41 4.7E-46 317.6 20.2 246 88-357 1-254 (323)
118 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-41 3.7E-46 311.9 18.9 250 90-357 1-260 (280)
119 cd05085 PTKc_Fer Catalytic dom 100.0 2.5E-41 5.4E-46 305.4 19.3 248 88-356 1-249 (250)
120 cd05603 STKc_SGK2 Catalytic do 100.0 3.7E-41 8E-46 315.8 21.1 246 88-357 1-254 (321)
121 cd05045 PTKc_RET Catalytic dom 100.0 1.6E-41 3.4E-46 313.8 18.3 257 83-359 1-287 (290)
122 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-41 3.3E-46 311.7 17.8 256 81-356 5-276 (277)
123 cd05570 STKc_PKC Catalytic dom 100.0 2E-41 4.3E-46 317.1 18.8 247 88-358 1-256 (318)
124 PTZ00283 serine/threonine prot 100.0 1.2E-41 2.6E-46 335.1 18.1 262 75-356 25-299 (496)
125 cd08529 STKc_FA2-like Catalyti 100.0 6E-41 1.3E-45 303.9 21.3 252 83-355 1-254 (256)
126 cd05630 STKc_GRK6 Catalytic do 100.0 2.6E-41 5.7E-46 311.4 19.2 257 83-358 1-265 (285)
127 cd05587 STKc_cPKC Catalytic do 100.0 1.6E-41 3.5E-46 318.6 17.7 251 83-357 1-260 (324)
128 cd05111 PTK_HER3 Pseudokinase 100.0 4.9E-41 1.1E-45 308.7 20.4 256 82-359 7-269 (279)
129 cd05032 PTKc_InsR_like Catalyt 100.0 5E-41 1.1E-45 308.2 20.4 255 82-356 6-276 (277)
130 cd05616 STKc_cPKC_beta Catalyt 100.0 2.6E-41 5.7E-46 317.0 18.7 251 83-357 1-260 (323)
131 cd05622 STKc_ROCK1 Catalytic d 100.0 3.4E-41 7.4E-46 321.6 19.7 264 76-359 37-309 (371)
132 cd05055 PTKc_PDGFR Catalytic d 100.0 2.4E-41 5.1E-46 314.3 17.9 259 80-357 33-300 (302)
133 cd06625 STKc_MEKK3_like Cataly 100.0 3.8E-41 8.3E-46 306.5 18.9 254 82-356 2-262 (263)
134 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.8E-41 4E-46 325.1 17.6 263 77-358 32-399 (401)
135 cd07853 STKc_NLK Catalytic dom 100.0 2E-41 4.3E-46 324.0 17.8 268 83-359 1-293 (372)
136 cd05097 PTKc_DDR_like Catalyti 100.0 5.4E-41 1.2E-45 310.9 20.2 262 82-356 5-294 (295)
137 cd05051 PTKc_DDR Catalytic dom 100.0 1E-40 2.3E-45 309.1 22.0 263 81-356 4-295 (296)
138 cd06615 PKc_MEK Catalytic doma 100.0 3.1E-41 6.7E-46 314.5 18.5 269 82-358 1-291 (308)
139 cd05069 PTKc_Yes Catalytic dom 100.0 7.6E-41 1.6E-45 304.2 20.6 253 82-357 6-259 (260)
140 cd08219 STKc_Nek3 Catalytic do 100.0 6E-41 1.3E-45 303.9 19.7 251 83-354 1-252 (255)
141 KOG1025 Epidermal growth facto 100.0 1.3E-41 2.8E-46 326.9 15.8 249 87-357 701-956 (1177)
142 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-41 4.2E-46 325.2 17.2 256 83-358 2-309 (382)
143 KOG4279 Serine/threonine prote 100.0 7.5E-42 1.6E-46 323.2 13.8 246 89-355 582-833 (1226)
144 cd05620 STKc_nPKC_delta Cataly 100.0 2.5E-41 5.5E-46 316.0 17.4 246 88-357 1-251 (316)
145 cd05091 PTKc_Ror2 Catalytic do 100.0 2.5E-41 5.4E-46 311.3 17.0 253 84-356 7-281 (283)
146 cd06646 STKc_MAP4K5 Catalytic 100.0 4.8E-41 1E-45 306.6 18.6 256 81-356 8-267 (267)
147 cd05034 PTKc_Src_like Catalyti 100.0 6.6E-41 1.4E-45 304.7 19.4 255 81-357 5-260 (261)
148 cd05602 STKc_SGK1 Catalytic do 100.0 3.1E-41 6.7E-46 316.8 17.8 246 88-357 1-254 (325)
149 cd05619 STKc_nPKC_theta Cataly 100.0 3.4E-41 7.4E-46 315.0 17.9 246 88-357 1-251 (316)
150 cd05632 STKc_GRK5 Catalytic do 100.0 7.3E-41 1.6E-45 308.5 19.7 255 84-357 2-264 (285)
151 cd05094 PTKc_TrkC Catalytic do 100.0 8.1E-41 1.8E-45 309.2 20.0 257 82-359 5-283 (291)
152 PTZ00267 NIMA-related protein 100.0 6.2E-41 1.3E-45 329.8 20.4 251 83-354 68-323 (478)
153 cd05607 STKc_GRK7 Catalytic do 100.0 7.6E-41 1.6E-45 307.1 19.6 245 90-352 1-248 (277)
154 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.3E-40 2.7E-45 303.7 20.9 259 82-358 2-265 (267)
155 cd05089 PTKc_Tie1 Catalytic do 100.0 4.1E-41 8.9E-46 312.0 17.9 258 82-361 2-278 (297)
156 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.1E-41 1.1E-45 312.9 18.6 259 81-359 17-300 (307)
157 cd05043 PTK_Ryk Pseudokinase d 100.0 8.5E-41 1.8E-45 307.2 19.8 258 81-358 5-276 (280)
158 cd05035 PTKc_Axl_like Catalyti 100.0 1.9E-40 4.1E-45 303.6 21.9 254 84-357 1-271 (273)
159 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.1E-41 8.9E-46 310.0 17.4 261 82-357 4-282 (284)
160 cd05088 PTKc_Tie2 Catalytic do 100.0 5.4E-41 1.2E-45 312.1 18.4 255 82-358 7-280 (303)
161 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.2E-41 1.8E-45 308.0 19.3 263 82-358 4-283 (284)
162 cd05101 PTKc_FGFR2 Catalytic d 100.0 9.2E-41 2E-45 310.7 19.8 261 81-361 14-299 (304)
163 cd05061 PTKc_InsR Catalytic do 100.0 8.7E-41 1.9E-45 308.5 19.2 259 80-358 4-278 (288)
164 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-40 4E-45 301.2 20.9 247 89-357 2-254 (257)
165 cd05103 PTKc_VEGFR2 Catalytic 100.0 7.9E-41 1.7E-45 316.2 19.2 260 81-359 6-340 (343)
166 cd05095 PTKc_DDR2 Catalytic do 100.0 2.2E-40 4.7E-45 307.1 21.7 262 82-356 5-295 (296)
167 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-40 2.7E-45 307.4 20.0 257 82-359 5-280 (288)
168 cd08229 STKc_Nek7 Catalytic do 100.0 8.8E-41 1.9E-45 304.9 18.7 259 82-358 2-265 (267)
169 cd06637 STKc_TNIK Catalytic do 100.0 3.1E-41 6.7E-46 308.8 15.7 256 79-356 3-271 (272)
170 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.6E-40 3.5E-45 303.3 20.3 256 82-358 5-267 (268)
171 cd05604 STKc_SGK3 Catalytic do 100.0 6.6E-41 1.4E-45 314.6 18.2 247 88-358 1-255 (325)
172 cd05075 PTKc_Axl Catalytic dom 100.0 1.7E-40 3.6E-45 303.9 20.4 254 84-357 1-270 (272)
173 cd05066 PTKc_EphR_A Catalytic 100.0 1.7E-40 3.7E-45 303.1 20.3 255 82-357 4-265 (267)
174 cd05073 PTKc_Hck Catalytic dom 100.0 2.8E-40 6.1E-45 300.5 21.6 254 81-357 5-259 (260)
175 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.2E-40 9.2E-45 300.8 22.7 252 89-356 2-268 (269)
176 cd05116 PTKc_Syk Catalytic dom 100.0 7.4E-41 1.6E-45 303.7 17.6 246 89-357 2-254 (257)
177 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.2E-41 4.7E-46 315.7 14.4 271 82-358 6-290 (309)
178 cd05039 PTKc_Csk_like Catalyti 100.0 9.9E-41 2.1E-45 302.7 18.2 249 82-357 6-255 (256)
179 cd07863 STKc_CDK4 Catalytic do 100.0 8.8E-41 1.9E-45 308.3 17.8 265 83-356 1-287 (288)
180 cd05615 STKc_cPKC_alpha Cataly 100.0 7.6E-41 1.7E-45 313.7 17.5 251 83-357 1-260 (323)
181 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-40 2.8E-45 313.3 18.9 246 90-358 1-257 (330)
182 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1E-40 2.2E-45 307.4 17.6 260 82-359 5-271 (284)
183 cd05050 PTKc_Musk Catalytic do 100.0 1.7E-40 3.6E-45 306.6 19.1 256 81-356 4-287 (288)
184 cd05627 STKc_NDR2 Catalytic do 100.0 9.4E-41 2E-45 317.9 17.9 257 82-358 1-297 (360)
185 cd05092 PTKc_TrkA Catalytic do 100.0 8.3E-41 1.8E-45 307.4 16.8 254 82-356 5-279 (280)
186 PF00069 Pkinase: Protein kina 100.0 3.2E-41 6.9E-46 306.3 13.9 256 84-356 1-259 (260)
187 cd07876 STKc_JNK2 Catalytic do 100.0 1.6E-40 3.5E-45 316.2 19.3 269 80-358 19-319 (359)
188 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.7E-40 8.1E-45 308.0 21.4 258 82-359 12-294 (314)
189 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.5E-40 5.5E-45 301.6 19.8 260 82-356 1-266 (267)
190 KOG0032 Ca2+/calmodulin-depend 100.0 3.1E-40 6.7E-45 310.0 20.8 258 80-359 33-298 (382)
191 cd05065 PTKc_EphR_B Catalytic 100.0 2.7E-40 5.9E-45 302.1 19.9 254 83-357 5-267 (269)
192 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-40 2.7E-45 302.2 17.5 249 88-356 1-256 (257)
193 cd06612 STKc_MST1_2 Catalytic 100.0 1.4E-40 2.9E-45 301.6 17.7 252 82-356 3-255 (256)
194 cd00192 PTKc Catalytic domain 100.0 5.6E-40 1.2E-44 298.1 21.7 249 88-356 1-262 (262)
195 cd05109 PTKc_HER2 Catalytic do 100.0 1.6E-40 3.6E-45 305.2 18.4 255 82-358 7-268 (279)
196 KOG0667 Dual-specificity tyros 100.0 1.5E-40 3.2E-45 315.5 18.5 270 82-361 186-509 (586)
197 cd06654 STKc_PAK1 Catalytic do 100.0 2.2E-40 4.8E-45 306.9 19.3 255 82-359 20-275 (296)
198 cd05060 PTKc_Syk_like Catalyti 100.0 5.3E-40 1.2E-44 298.1 21.5 248 88-358 1-255 (257)
199 PHA03211 serine/threonine kina 100.0 2E-40 4.4E-45 321.7 19.8 264 82-357 169-458 (461)
200 cd06631 STKc_YSK4 Catalytic do 100.0 1.4E-40 3.1E-45 303.2 17.6 254 83-356 1-264 (265)
201 cd08221 STKc_Nek9 Catalytic do 100.0 5.4E-40 1.2E-44 297.8 21.2 253 83-356 1-255 (256)
202 KOG0658 Glycogen synthase kina 100.0 2.4E-41 5.2E-46 300.2 11.9 262 82-357 24-309 (364)
203 cd06609 STKc_MST3_like Catalyt 100.0 1.7E-40 3.7E-45 304.3 18.0 255 82-359 1-256 (274)
204 KOG0033 Ca2+/calmodulin-depend 100.0 1.1E-42 2.5E-47 291.8 2.9 258 81-359 10-272 (355)
205 cd05112 PTKc_Itk Catalytic dom 100.0 2.7E-40 5.9E-45 299.8 18.7 251 82-355 4-255 (256)
206 KOG0574 STE20-like serine/thre 100.0 9E-43 2E-47 300.5 2.3 250 84-356 35-285 (502)
207 cd05047 PTKc_Tie Catalytic dom 100.0 3E-40 6.5E-45 302.0 18.9 249 88-358 1-268 (270)
208 cd05056 PTKc_FAK Catalytic dom 100.0 4.3E-40 9.3E-45 300.9 19.9 256 82-359 6-266 (270)
209 cd06638 STKc_myosinIIIA Cataly 100.0 2E-40 4.4E-45 305.6 17.7 262 74-356 10-285 (286)
210 PTZ00036 glycogen synthase kin 100.0 6.3E-41 1.4E-45 326.1 14.6 264 81-358 65-355 (440)
211 KOG0594 Protein kinase PCTAIRE 100.0 8.9E-41 1.9E-45 296.9 14.2 266 84-357 13-305 (323)
212 cd07873 STKc_PCTAIRE1 Catalyti 100.0 9.4E-41 2E-45 310.2 15.0 271 82-358 6-290 (301)
213 cd05082 PTKc_Csk Catalytic dom 100.0 6.7E-40 1.4E-44 297.3 20.2 248 82-357 6-255 (256)
214 cd06656 STKc_PAK3 Catalytic do 100.0 6.1E-40 1.3E-44 304.1 20.2 261 81-364 18-279 (297)
215 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.3E-39 2.8E-44 307.0 22.7 260 82-361 12-296 (334)
216 PRK13184 pknD serine/threonine 100.0 3.1E-40 6.8E-45 334.5 19.6 259 82-358 2-290 (932)
217 cd06643 STKc_SLK Catalytic dom 100.0 4.3E-40 9.3E-45 302.9 18.8 258 84-362 7-270 (282)
218 smart00219 TyrKc Tyrosine kina 100.0 1.3E-39 2.8E-44 295.3 21.6 252 84-355 1-258 (258)
219 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.2E-40 1.1E-44 303.0 19.3 257 83-359 2-267 (286)
220 PHA03209 serine/threonine kina 100.0 4.3E-40 9.3E-45 312.7 19.2 264 80-357 64-354 (357)
221 cd08227 PK_STRAD_alpha Pseudok 100.0 4.4E-40 9.5E-45 309.3 19.0 263 86-358 2-311 (327)
222 cd07874 STKc_JNK3 Catalytic do 100.0 2.2E-40 4.8E-45 314.9 17.2 269 80-358 15-315 (355)
223 cd08223 STKc_Nek4 Catalytic do 100.0 1E-39 2.2E-44 296.1 20.7 253 83-356 1-256 (257)
224 cd07868 STKc_CDK8 Catalytic do 100.0 5.6E-40 1.2E-44 307.3 19.6 263 87-356 6-316 (317)
225 cd06640 STKc_MST4 Catalytic do 100.0 8E-40 1.7E-44 300.3 20.1 251 83-357 5-256 (277)
226 cd08218 STKc_Nek1 Catalytic do 100.0 9.3E-40 2E-44 296.2 20.2 253 83-356 1-255 (256)
227 cd05046 PTK_CCK4 Pseudokinase 100.0 9.3E-40 2E-44 299.5 20.4 256 82-356 5-274 (275)
228 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.6E-40 5.7E-45 312.9 17.3 265 78-359 11-303 (343)
229 PTZ00284 protein kinase; Provi 100.0 2.1E-40 4.6E-45 325.7 17.3 271 77-359 124-443 (467)
230 cd05042 PTKc_Aatyk Catalytic d 100.0 3.5E-40 7.5E-45 301.4 17.5 252 89-356 2-268 (269)
231 cd06644 STKc_STK10_LOK Catalyt 100.0 7.8E-40 1.7E-44 302.7 20.0 255 82-357 12-272 (292)
232 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.3E-40 9.3E-45 302.9 18.1 262 73-356 7-281 (282)
233 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 9.5E-40 2.1E-44 300.7 20.3 263 82-358 4-283 (284)
234 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.5E-39 3.2E-44 297.1 21.4 252 89-356 2-267 (268)
235 PHA03207 serine/threonine kina 100.0 3E-40 6.6E-45 317.6 17.7 267 81-359 91-380 (392)
236 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.2E-40 1.1E-44 299.1 18.1 240 88-356 1-262 (262)
237 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-40 4.5E-45 304.2 15.6 251 84-358 6-257 (277)
238 cd06655 STKc_PAK2 Catalytic do 100.0 3.1E-40 6.8E-45 305.9 16.8 257 82-361 19-276 (296)
239 cd05041 PTKc_Fes_like Catalyti 100.0 7.8E-40 1.7E-44 295.8 18.8 248 88-356 1-250 (251)
240 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-39 2.6E-44 296.5 20.1 250 88-358 1-259 (262)
241 KOG0610 Putative serine/threon 100.0 2.6E-40 5.7E-45 297.0 15.0 257 82-357 77-395 (459)
242 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.8E-40 8.3E-45 301.9 16.5 239 89-356 2-274 (274)
243 cd06605 PKc_MAPKK Catalytic do 100.0 7.7E-40 1.7E-44 298.3 18.3 258 83-358 2-261 (265)
244 cd07875 STKc_JNK1 Catalytic do 100.0 7.4E-40 1.6E-44 312.3 18.9 269 80-358 22-322 (364)
245 cd06624 STKc_ASK Catalytic dom 100.0 9.5E-40 2.1E-44 298.3 18.9 257 79-356 5-267 (268)
246 KOG0577 Serine/threonine prote 100.0 2.8E-41 6.1E-46 314.3 8.7 244 86-355 30-279 (948)
247 cd05574 STKc_phototropin_like 100.0 5.3E-40 1.2E-44 307.3 17.5 257 82-357 1-292 (316)
248 cd07861 STKc_CDK1_euk Catalyti 100.0 8.6E-40 1.9E-44 301.3 18.6 263 83-356 1-284 (285)
249 cd05044 PTKc_c-ros Catalytic d 100.0 9.4E-40 2E-44 298.4 18.5 249 88-356 1-268 (269)
250 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.4E-40 1.2E-44 302.7 17.0 269 82-356 1-285 (286)
251 cd07844 STKc_PCTAIRE_like Cata 100.0 6.4E-40 1.4E-44 303.1 17.5 267 82-356 5-290 (291)
252 cd06639 STKc_myosinIIIB Cataly 100.0 5.8E-40 1.3E-44 303.4 17.2 264 72-356 12-289 (291)
253 cd06645 STKc_MAP4K3 Catalytic 100.0 3.9E-40 8.5E-45 300.6 15.7 254 82-355 9-266 (267)
254 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-39 2.3E-44 297.7 18.6 252 83-356 1-266 (267)
255 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.6E-40 5.7E-45 304.8 14.6 269 82-356 1-285 (286)
256 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.9E-39 8.6E-44 297.3 22.2 265 83-359 2-271 (287)
257 cd07833 STKc_CDKL Catalytic do 100.0 2.4E-40 5.2E-45 305.3 14.1 264 82-356 1-287 (288)
258 cd07839 STKc_CDK5 Catalytic do 100.0 4E-40 8.7E-45 303.4 15.4 266 83-356 1-283 (284)
259 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-39 3E-44 296.0 18.6 254 82-354 3-260 (262)
260 cd05057 PTKc_EGFR_like Catalyt 100.0 2.3E-39 5E-44 297.5 20.2 255 82-358 7-268 (279)
261 cd05083 PTKc_Chk Catalytic dom 100.0 9.8E-40 2.1E-44 295.8 17.2 247 82-357 6-253 (254)
262 cd06608 STKc_myosinIII_like Ca 100.0 7.9E-40 1.7E-44 299.6 16.8 257 79-356 3-274 (275)
263 cd07867 STKc_CDC2L6 Catalytic 100.0 1.4E-39 3.1E-44 304.5 18.8 263 87-356 6-316 (317)
264 cd06611 STKc_SLK_like Catalyti 100.0 6.6E-40 1.4E-44 301.3 16.1 257 81-358 4-266 (280)
265 cd07832 STKc_CCRK Catalytic do 100.0 5.9E-40 1.3E-44 302.4 15.6 267 83-357 1-285 (286)
266 cd08528 STKc_Nek10 Catalytic d 100.0 2.3E-39 4.9E-44 296.0 19.2 253 83-356 1-268 (269)
267 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-39 3.2E-44 295.1 17.8 250 83-355 1-256 (258)
268 KOG0199 ACK and related non-re 100.0 4.7E-41 1E-45 318.1 8.0 252 83-355 111-369 (1039)
269 cd08220 STKc_Nek8 Catalytic do 100.0 3.4E-39 7.4E-44 292.4 19.9 251 83-355 1-254 (256)
270 cd06917 STKc_NAK1_like Catalyt 100.0 2.9E-39 6.3E-44 296.5 19.7 253 83-358 2-259 (277)
271 cd05580 STKc_PKA Catalytic dom 100.0 2.4E-39 5.2E-44 299.1 19.3 249 82-357 1-257 (290)
272 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.3E-39 7.2E-44 295.3 19.7 257 83-356 2-271 (272)
273 KOG0579 Ste20-like serine/thre 100.0 6.4E-41 1.4E-45 314.0 8.3 254 84-358 34-293 (1187)
274 KOG0599 Phosphorylase kinase g 100.0 2E-40 4.3E-45 282.4 10.4 261 77-358 12-287 (411)
275 cd06651 STKc_MEKK3 Catalytic d 100.0 4.1E-39 8.8E-44 293.8 19.8 254 82-357 2-264 (266)
276 cd06623 PKc_MAPKK_plant_like C 100.0 7.5E-39 1.6E-43 291.4 21.5 255 82-356 1-258 (264)
277 cd06626 STKc_MEKK4 Catalytic d 100.0 3.3E-39 7.1E-44 293.9 19.0 255 83-356 1-263 (264)
278 cd05110 PTKc_HER4 Catalytic do 100.0 3.4E-39 7.3E-44 300.1 19.4 255 82-358 7-268 (303)
279 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.6E-39 1E-43 292.0 19.8 238 88-356 1-259 (259)
280 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.6E-39 7.9E-44 296.8 19.2 258 82-360 1-267 (283)
281 cd06658 STKc_PAK5 Catalytic do 100.0 7.7E-40 1.7E-44 302.6 14.8 250 87-359 27-277 (292)
282 PTZ00266 NIMA-related protein 100.0 1.5E-39 3.2E-44 331.0 17.9 259 80-357 11-298 (1021)
283 cd06647 STKc_PAK_I Catalytic d 100.0 7.4E-39 1.6E-43 296.3 20.7 258 81-361 18-276 (293)
284 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.2E-39 4.7E-44 299.6 17.2 265 81-356 4-290 (291)
285 KOG0986 G protein-coupled rece 100.0 1.4E-40 3.1E-45 301.2 8.6 254 82-356 185-448 (591)
286 KOG0596 Dual specificity; seri 100.0 5.1E-40 1.1E-44 304.2 12.5 255 80-356 359-629 (677)
287 cd06641 STKc_MST3 Catalytic do 100.0 6E-39 1.3E-43 294.5 19.5 251 84-358 6-257 (277)
288 cd05609 STKc_MAST Catalytic do 100.0 2.8E-39 6E-44 300.9 17.5 256 82-357 1-276 (305)
289 cd06630 STKc_MEKK1 Catalytic d 100.0 7.7E-39 1.7E-43 292.2 19.9 256 83-356 1-266 (268)
290 cd06652 STKc_MEKK2 Catalytic d 100.0 6.2E-39 1.3E-43 292.4 19.1 253 82-356 2-263 (265)
291 cd07860 STKc_CDK2_3 Catalytic 100.0 2.9E-39 6.4E-44 297.6 17.1 263 83-356 1-283 (284)
292 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.1E-39 2.3E-44 296.4 13.4 240 88-356 1-258 (258)
293 cd07841 STKc_CDK7 Catalytic do 100.0 5.7E-39 1.2E-43 297.8 18.5 267 83-358 1-286 (298)
294 cd06616 PKc_MKK4 Catalytic dom 100.0 3.4E-39 7.4E-44 297.8 16.6 258 83-358 5-271 (288)
295 cd06614 STKc_PAK Catalytic dom 100.0 6.6E-39 1.4E-43 295.6 18.5 258 80-359 17-275 (286)
296 cd08225 STKc_Nek5 Catalytic do 100.0 2E-39 4.3E-44 294.1 14.4 253 83-356 1-256 (257)
297 cd08217 STKc_Nek2 Catalytic do 100.0 1.7E-38 3.7E-43 289.1 20.6 252 83-355 1-263 (265)
298 KOG0584 Serine/threonine prote 100.0 7.7E-40 1.7E-44 308.2 12.0 249 88-359 46-301 (632)
299 cd05578 STKc_Yank1 Catalytic d 100.0 5.5E-39 1.2E-43 291.6 17.0 251 83-355 1-256 (258)
300 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.9E-38 4.1E-43 290.4 20.4 254 84-357 1-271 (273)
301 cd05572 STKc_cGK_PKG Catalytic 100.0 9.1E-39 2E-43 290.8 18.1 248 90-358 1-256 (262)
302 cd06659 STKc_PAK6 Catalytic do 100.0 3.3E-39 7.2E-44 299.2 15.4 248 88-358 27-275 (297)
303 cd06607 STKc_TAO Catalytic dom 100.0 1.5E-38 3.3E-43 296.3 19.9 253 82-360 15-273 (307)
304 cd07835 STKc_CDK1_like Catalyt 100.0 5.6E-39 1.2E-43 295.6 16.4 262 84-356 1-282 (283)
305 cd07849 STKc_ERK1_2_like Catal 100.0 4.1E-39 8.9E-44 303.8 15.8 269 81-359 4-297 (336)
306 cd05122 PKc_STE Catalytic doma 100.0 1.5E-38 3.3E-43 286.9 18.9 251 83-355 1-252 (253)
307 cd05577 STKc_GRK Catalytic dom 100.0 1.4E-38 3.1E-43 292.0 18.4 249 90-357 1-257 (277)
308 KOG4717 Serine/threonine prote 100.0 4.7E-39 1E-43 295.3 14.7 252 82-357 18-273 (864)
309 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-38 2.9E-43 293.4 17.9 252 84-358 21-273 (285)
310 cd07836 STKc_Pho85 Catalytic d 100.0 8.8E-39 1.9E-43 294.3 16.4 264 83-356 1-283 (284)
311 PHA03210 serine/threonine kina 100.0 3E-39 6.5E-44 319.0 14.1 273 79-359 145-459 (501)
312 cd07831 STKc_MOK Catalytic dom 100.0 2.3E-38 5E-43 291.2 19.1 264 84-356 1-281 (282)
313 cd07855 STKc_ERK5 Catalytic do 100.0 1.2E-38 2.6E-43 300.4 17.1 274 81-360 4-300 (334)
314 cd07843 STKc_CDC2L1 Catalytic 100.0 1.4E-38 3E-43 294.5 17.1 268 82-356 5-292 (293)
315 cd07830 STKc_MAK_like Catalyti 100.0 2.5E-38 5.3E-43 291.2 18.6 267 84-356 1-282 (283)
316 cd05633 STKc_GRK3 Catalytic do 100.0 1.5E-38 3.2E-43 292.2 16.8 247 89-358 1-259 (279)
317 cd06606 STKc_MAPKKK Catalytic 100.0 8.8E-38 1.9E-42 283.1 21.5 254 83-356 1-259 (260)
318 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-38 3E-43 294.9 16.4 257 82-359 15-278 (296)
319 KOG0200 Fibroblast/platelet-de 100.0 4.2E-38 9.1E-43 315.6 20.5 263 77-358 291-579 (609)
320 PLN00009 cyclin-dependent kina 100.0 1.1E-38 2.4E-43 295.3 14.7 265 82-357 2-287 (294)
321 cd07840 STKc_CDK9_like Catalyt 100.0 1.4E-38 3E-43 293.3 15.0 264 84-356 1-286 (287)
322 cd07850 STKc_JNK Catalytic dom 100.0 4.9E-38 1.1E-42 298.5 19.3 269 80-358 14-315 (353)
323 cd07865 STKc_CDK9 Catalytic do 100.0 2.4E-38 5.2E-43 295.1 16.8 267 82-356 12-309 (310)
324 cd06635 STKc_TAO1 Catalytic do 100.0 6.9E-38 1.5E-42 293.1 19.8 253 84-362 27-285 (317)
325 cd07842 STKc_CDK8_like Catalyt 100.0 3.7E-38 8E-43 294.7 17.5 270 83-356 1-315 (316)
326 KOG4645 MAPKKK (MAP kinase kin 100.0 4E-40 8.8E-45 330.5 3.5 260 77-357 1230-1497(1509)
327 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-37 2.6E-42 282.2 19.4 253 83-356 1-257 (258)
328 cd05118 STKc_CMGC Catalytic do 100.0 2.6E-38 5.7E-43 290.9 15.1 261 84-356 1-282 (283)
329 cd08216 PK_STRAD Pseudokinase 100.0 8E-38 1.7E-42 292.3 18.5 261 87-358 7-299 (314)
330 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-38 2.4E-43 318.8 13.3 257 78-354 475-871 (1351)
331 cd08226 PK_STRAD_beta Pseudoki 100.0 1E-37 2.2E-42 293.4 19.2 260 89-358 5-312 (328)
332 cd07864 STKc_CDK12 Catalytic d 100.0 5E-38 1.1E-42 292.0 16.5 270 79-356 4-301 (302)
333 cd07838 STKc_CDK4_6_like Catal 100.0 2.8E-37 6.1E-42 284.6 21.1 261 84-356 1-286 (287)
334 cd07852 STKc_MAPK15 Catalytic 100.0 8.4E-38 1.8E-42 295.1 18.0 271 80-357 5-298 (337)
335 cd07837 STKc_CdkB_plant Cataly 100.0 1E-37 2.2E-42 288.9 18.1 264 82-356 1-293 (295)
336 cd07845 STKc_CDK10 Catalytic d 100.0 3.1E-38 6.6E-43 294.5 14.6 264 81-358 6-294 (309)
337 cd05613 STKc_MSK1_N N-terminal 100.0 1.5E-37 3.2E-42 287.2 18.8 256 83-357 1-271 (290)
338 cd08530 STKc_CNK2-like Catalyt 100.0 7.7E-38 1.7E-42 283.4 16.4 250 83-355 1-254 (256)
339 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.9E-38 2.2E-42 293.2 17.7 277 79-367 7-301 (328)
340 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2E-38 4.4E-43 299.2 13.0 266 81-358 4-295 (337)
341 cd05606 STKc_beta_ARK Catalyti 100.0 1.9E-37 4E-42 284.8 19.0 247 89-358 1-259 (278)
342 cd05581 STKc_PDK1 Catalytic do 100.0 6.8E-38 1.5E-42 287.6 15.9 252 82-356 1-279 (280)
343 cd07834 STKc_MAPK Catalytic do 100.0 4.9E-38 1.1E-42 295.8 15.1 265 83-359 1-294 (330)
344 PHA03390 pk1 serine/threonine- 100.0 2.1E-37 4.5E-42 282.7 18.7 251 77-357 9-265 (267)
345 KOG4250 TANK binding protein k 100.0 2.5E-38 5.3E-43 301.6 12.7 263 83-352 14-304 (732)
346 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.1E-37 4.6E-42 282.2 18.2 252 82-355 2-262 (264)
347 cd05583 STKc_MSK_N N-terminal 100.0 1.9E-37 4.1E-42 286.2 17.9 255 83-356 1-265 (288)
348 KOG0586 Serine/threonine prote 100.0 6.4E-38 1.4E-42 294.8 14.7 255 80-359 54-311 (596)
349 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-37 4.1E-42 282.1 17.5 247 90-357 1-260 (265)
350 cd06627 STKc_Cdc7_like Catalyt 100.0 5.9E-37 1.3E-41 277.2 20.4 249 83-354 1-251 (254)
351 PHA02882 putative serine/threo 100.0 1E-37 2.2E-42 288.8 15.7 259 81-355 11-293 (294)
352 cd06634 STKc_TAO2 Catalytic do 100.0 2E-37 4.3E-42 288.8 17.4 252 84-361 17-274 (308)
353 cd05611 STKc_Rim15_like Cataly 100.0 3.9E-37 8.4E-42 279.8 18.7 245 88-356 2-253 (260)
354 KOG0983 Mitogen-activated prot 100.0 4.8E-38 1E-42 268.0 11.7 251 86-356 96-351 (391)
355 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-37 2.6E-42 288.0 15.0 249 88-359 26-275 (292)
356 cd07879 STKc_p38delta_MAPK13 C 100.0 1.6E-37 3.4E-42 293.7 15.6 260 81-358 14-301 (342)
357 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.4E-37 1.2E-41 290.3 18.2 274 73-359 8-305 (345)
358 cd06633 STKc_TAO3 Catalytic do 100.0 1.9E-36 4.2E-41 282.7 21.2 249 84-358 23-277 (313)
359 KOG0612 Rho-associated, coiled 100.0 4.6E-38 1E-42 312.1 9.7 264 76-359 69-343 (1317)
360 PTZ00024 cyclin-dependent prot 100.0 4.1E-37 8.8E-42 290.2 15.8 268 82-358 8-317 (335)
361 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.5E-37 1.4E-41 289.5 17.2 272 77-359 10-303 (343)
362 cd07866 STKc_BUR1 Catalytic do 100.0 4E-37 8.7E-42 287.0 15.2 268 81-356 7-310 (311)
363 KOG0690 Serine/threonine prote 100.0 7.5E-38 1.6E-42 272.8 9.1 250 82-355 168-425 (516)
364 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.2E-37 9.2E-42 290.7 14.9 264 82-359 5-305 (342)
365 cd08222 STKc_Nek11 Catalytic d 100.0 1.2E-36 2.6E-41 276.5 17.2 252 83-356 1-259 (260)
366 cd07829 STKc_CDK_like Catalyti 100.0 7.5E-37 1.6E-41 281.1 16.0 267 84-356 1-281 (282)
367 KOG0604 MAP kinase-activated p 100.0 2.4E-37 5.3E-42 266.8 10.4 290 80-391 59-358 (400)
368 cd07851 STKc_p38 Catalytic dom 100.0 7.1E-37 1.5E-41 289.3 14.4 263 80-359 13-303 (343)
369 cd07857 STKc_MPK1 Catalytic do 100.0 1.7E-36 3.7E-41 285.5 16.7 268 83-357 1-295 (332)
370 cd05123 STKc_AGC Catalytic dom 100.0 2.4E-36 5.3E-41 272.7 16.7 243 90-356 1-249 (250)
371 cd05610 STKc_MASTL Catalytic d 100.0 1.4E-36 3.1E-41 308.9 16.4 146 82-232 4-152 (669)
372 KOG1024 Receptor-like protein 100.0 5.9E-37 1.3E-41 273.1 11.8 261 77-357 279-554 (563)
373 KOG0587 Traf2- and Nck-interac 100.0 1.4E-36 3.1E-41 295.0 15.4 263 72-355 9-283 (953)
374 KOG1151 Tousled-like protein k 100.0 2.4E-36 5.2E-41 273.1 11.2 260 80-354 461-741 (775)
375 KOG1006 Mitogen-activated prot 100.0 5.9E-38 1.3E-42 266.4 0.7 253 87-355 69-328 (361)
376 KOG0666 Cyclin C-dependent kin 100.0 1E-36 2.2E-41 264.2 7.7 275 82-360 24-343 (438)
377 cd05576 STKc_RPK118_like Catal 100.0 9.7E-36 2.1E-40 266.8 14.4 226 93-355 4-235 (237)
378 KOG0607 MAP kinase-interacting 100.0 2.3E-36 5E-41 262.9 9.6 267 74-358 75-365 (463)
379 KOG0603 Ribosomal protein S6 k 100.0 8.2E-36 1.8E-40 282.1 12.4 243 81-357 321-566 (612)
380 KOG4236 Serine/threonine prote 100.0 4.4E-36 9.5E-41 276.4 9.8 251 87-359 569-824 (888)
381 KOG0614 cGMP-dependent protein 100.0 1.1E-36 2.4E-41 279.3 5.8 254 83-359 421-682 (732)
382 PLN03225 Serine/threonine-prot 100.0 2.9E-35 6.4E-40 292.4 13.0 264 80-359 130-455 (566)
383 KOG0696 Serine/threonine prote 100.0 1.2E-35 2.6E-40 266.4 8.6 242 82-347 349-594 (683)
384 KOG0671 LAMMER dual specificit 100.0 1.3E-35 2.8E-40 264.3 8.7 269 80-358 87-410 (415)
385 PLN03224 probable serine/threo 100.0 1.7E-34 3.7E-39 280.2 17.2 267 80-358 143-504 (507)
386 KOG0662 Cyclin-dependent kinas 100.0 2.6E-35 5.6E-40 236.7 9.3 267 83-357 3-286 (292)
387 smart00220 S_TKc Serine/Threon 100.0 2E-34 4.4E-39 258.2 15.4 241 94-355 1-242 (244)
388 KOG0669 Cyclin T-dependent kin 100.0 7.9E-37 1.7E-41 257.7 -0.5 272 84-360 19-321 (376)
389 KOG1027 Serine/threonine prote 100.0 1.2E-34 2.6E-39 280.3 7.8 246 84-355 511-768 (903)
390 KOG0695 Serine/threonine prote 100.0 2.1E-33 4.5E-38 246.1 11.3 249 82-347 250-503 (593)
391 KOG1290 Serine/threonine prote 100.0 1E-32 2.3E-37 252.4 15.8 269 82-359 78-555 (590)
392 KOG0984 Mitogen-activated prot 100.0 1.7E-33 3.6E-38 231.0 8.2 206 77-287 41-254 (282)
393 KOG0608 Warts/lats-like serine 100.0 4.2E-33 9E-38 261.7 11.9 209 82-295 629-881 (1034)
394 KOG0664 Nemo-like MAPK-related 100.0 1.7E-34 3.8E-39 246.3 2.2 268 84-357 55-346 (449)
395 cd00180 PKc Catalytic domain o 100.0 4.4E-31 9.5E-36 231.0 19.1 212 90-355 1-215 (215)
396 KOG0668 Casein kinase II, alph 100.0 1.2E-32 2.7E-37 229.3 6.8 271 70-357 23-325 (338)
397 KOG0665 Jun-N-terminal kinase 100.0 1.8E-31 4E-36 232.7 7.9 266 82-358 17-314 (369)
398 smart00221 STYKc Protein kinas 100.0 5.3E-30 1.2E-34 227.1 16.3 200 84-287 1-202 (225)
399 KOG0670 U4/U6-associated splic 100.0 3E-31 6.6E-36 244.3 5.8 275 72-355 422-747 (752)
400 KOG0576 Mitogen-activated prot 100.0 2.2E-31 4.8E-36 251.8 4.7 254 81-354 14-271 (829)
401 KOG1152 Signal transduction se 100.0 2.1E-30 4.6E-35 241.5 7.9 197 82-286 561-770 (772)
402 KOG1167 Serine/threonine prote 100.0 1.1E-29 2.4E-34 229.4 12.0 270 76-357 30-384 (418)
403 KOG1345 Serine/threonine kinas 100.0 6.3E-29 1.4E-33 212.1 9.2 254 81-356 23-289 (378)
404 PLN00181 protein SPA1-RELATED; 100.0 8.4E-29 1.8E-33 258.0 8.3 198 137-358 30-269 (793)
405 smart00750 KIND kinase non-cat 99.9 1.5E-27 3.1E-32 203.7 10.4 167 164-358 1-169 (176)
406 PRK09188 serine/threonine prot 99.9 4E-26 8.7E-31 212.9 14.9 169 77-260 13-195 (365)
407 KOG1164 Casein kinase (serine/ 99.9 3.5E-25 7.6E-30 207.0 17.5 259 83-359 19-298 (322)
408 KOG1163 Casein kinase (serine/ 99.9 2E-25 4.3E-30 187.8 8.0 257 81-355 14-281 (341)
409 KOG0195 Integrin-linked kinase 99.9 3.3E-26 7.1E-31 195.7 3.3 247 88-358 196-446 (448)
410 KOG1165 Casein kinase (serine/ 99.9 2.9E-24 6.3E-29 188.7 12.3 201 81-289 27-240 (449)
411 KOG0590 Checkpoint kinase and 99.9 2.5E-25 5.5E-30 220.8 6.4 258 85-357 321-588 (601)
412 COG0515 SPS1 Serine/threonine 99.9 6.2E-23 1.3E-27 192.0 20.7 261 84-354 2-275 (384)
413 KOG1240 Protein kinase contain 99.9 1.2E-24 2.5E-29 216.7 2.8 250 83-356 24-293 (1431)
414 PRK10359 lipopolysaccharide co 99.9 2.4E-23 5.3E-28 180.8 8.7 173 80-280 29-217 (232)
415 cd05147 RIO1_euk RIO kinase fa 99.9 5.7E-23 1.2E-27 176.5 10.7 141 87-235 2-168 (190)
416 cd05145 RIO1_like RIO kinase f 99.9 1.2E-21 2.7E-26 168.8 14.1 143 87-237 2-170 (190)
417 KOG1023 Natriuretic peptide re 99.9 8.2E-22 1.8E-26 187.3 12.4 217 133-359 1-225 (484)
418 PRK12274 serine/threonine prot 99.9 3.5E-21 7.5E-26 163.8 12.2 185 86-287 6-209 (218)
419 KOG4158 BRPK/PTEN-induced prot 99.9 2E-21 4.4E-26 174.7 9.7 193 137-352 274-508 (598)
420 KOG0603 Ribosomal protein S6 k 99.8 7.5E-22 1.6E-26 187.7 5.9 226 89-348 1-232 (612)
421 PF14531 Kinase-like: Kinase-l 99.8 1.2E-20 2.7E-25 168.8 9.9 232 84-345 14-288 (288)
422 PRK10345 hypothetical protein; 99.8 1.5E-19 3.3E-24 156.7 13.0 135 86-231 6-156 (210)
423 KOG1033 eIF-2alpha kinase PEK/ 99.8 7.6E-21 1.6E-25 177.5 4.0 175 153-353 330-511 (516)
424 cd05144 RIO2_C RIO kinase fami 99.8 5E-19 1.1E-23 153.8 11.7 148 76-238 9-179 (198)
425 PRK14879 serine/threonine prot 99.8 6.6E-19 1.4E-23 154.8 12.3 135 88-233 2-143 (211)
426 KOG1166 Mitotic checkpoint ser 99.8 3.6E-19 7.8E-24 180.7 11.9 193 80-283 696-901 (974)
427 smart00090 RIO RIO-like kinase 99.8 8.4E-19 1.8E-23 155.8 12.1 144 83-235 29-199 (237)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 1.2E-18 2.6E-23 151.7 11.2 131 89-233 1-138 (199)
429 PRK09605 bifunctional UGMP fam 99.8 1.3E-18 2.7E-23 173.6 12.2 141 79-234 330-477 (535)
430 KOG0606 Microtubule-associated 99.8 2E-19 4.3E-24 179.6 2.9 208 82-347 83-305 (1205)
431 cd05119 RIO RIO kinase family, 99.7 6.3E-17 1.4E-21 139.3 10.8 139 87-236 2-166 (187)
432 cd05120 APH_ChoK_like Aminogly 99.7 1.6E-16 3.6E-21 131.4 12.1 135 87-234 3-139 (155)
433 KOG0590 Checkpoint kinase and 99.7 6E-18 1.3E-22 168.4 2.4 262 81-359 19-291 (601)
434 PRK01723 3-deoxy-D-manno-octul 99.7 6.2E-16 1.3E-20 137.7 13.0 137 87-234 36-192 (239)
435 TIGR01982 UbiB 2-polyprenylphe 99.6 1.1E-14 2.4E-19 140.8 12.7 147 82-236 118-309 (437)
436 KOG1266 Protein kinase [Signal 99.5 1.1E-14 2.3E-19 128.8 4.9 204 131-356 119-333 (458)
437 PRK04750 ubiB putative ubiquin 99.5 5.9E-14 1.3E-18 137.3 8.0 146 80-236 118-316 (537)
438 KOG0601 Cyclin-dependent kinas 99.5 8.8E-14 1.9E-18 132.9 7.6 250 82-354 114-379 (524)
439 cd05151 ChoK Choline Kinase (C 99.4 7.1E-13 1.5E-17 112.1 8.7 130 88-233 4-136 (170)
440 KOG3087 Serine/threonine prote 99.4 4.9E-12 1.1E-16 103.6 12.1 144 86-233 11-165 (229)
441 cd05146 RIO3_euk RIO kinase fa 99.4 1.4E-11 3E-16 105.1 12.9 138 88-236 3-176 (197)
442 COG3642 Mn2+-dependent serine/ 99.3 1.8E-11 3.9E-16 100.8 10.8 133 88-234 2-141 (204)
443 cd05154 ACAD10_11_like Acyl-Co 99.3 1.5E-11 3.4E-16 108.6 11.1 143 88-233 4-206 (223)
444 KOG0601 Cyclin-dependent kinas 99.3 1.6E-12 3.6E-17 124.3 4.9 265 64-358 246-518 (524)
445 KOG1243 Protein kinase [Genera 99.3 1.6E-11 3.5E-16 118.8 11.4 168 102-282 33-200 (690)
446 PRK15123 lipopolysaccharide co 99.2 6.4E-10 1.4E-14 100.2 14.1 142 88-233 28-194 (268)
447 KOG0606 Microtubule-associated 99.1 1.2E-11 2.6E-16 124.7 1.8 251 79-349 801-1084(1205)
448 PF01163 RIO1: RIO1 family; I 99.1 8.8E-10 1.9E-14 93.7 11.1 127 97-235 1-157 (188)
449 KOG3741 Poly(A) ribonuclease s 99.1 2E-09 4.3E-14 101.5 12.6 167 96-284 290-475 (655)
450 COG4248 Uncharacterized protei 99.1 1E-08 2.2E-13 94.5 16.7 260 85-358 14-300 (637)
451 COG0478 RIO-like serine/threon 98.9 1.5E-08 3.2E-13 88.8 10.0 136 84-233 93-251 (304)
452 COG0661 AarF Predicted unusual 98.9 1.8E-08 4E-13 98.3 11.2 148 81-236 125-317 (517)
453 PRK09902 hypothetical protein; 98.8 6.5E-08 1.4E-12 82.8 12.5 139 90-232 26-178 (216)
454 PF06293 Kdo: Lipopolysacchari 98.8 2.6E-08 5.6E-13 86.9 9.6 107 123-234 55-171 (206)
455 KOG2137 Protein kinase [Signal 98.7 5.7E-09 1.2E-13 101.8 2.0 151 188-354 106-265 (700)
456 COG1718 RIO1 Serine/threonine 98.6 7E-07 1.5E-11 77.7 12.1 154 72-236 35-218 (268)
457 KOG0576 Mitogen-activated prot 98.6 7E-09 1.5E-13 100.2 -0.2 198 72-286 232-431 (829)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 6.9E-07 1.5E-11 78.9 12.2 138 88-232 7-181 (226)
459 PF06176 WaaY: Lipopolysacchar 98.6 6.3E-07 1.4E-11 77.1 10.8 138 80-233 29-183 (229)
460 KOG1235 Predicted unusual prot 98.5 7.6E-07 1.6E-11 86.9 11.1 148 82-238 162-359 (538)
461 PF01636 APH: Phosphotransfera 98.4 5.6E-06 1.2E-10 73.5 13.0 141 88-232 3-196 (239)
462 cd05150 APH Aminoglycoside 3'- 98.4 3.7E-06 8.1E-11 75.4 11.2 138 90-232 6-192 (244)
463 PLN02876 acyl-CoA dehydrogenas 98.3 1.1E-05 2.4E-10 84.9 13.9 80 87-166 43-131 (822)
464 PF12260 PIP49_C: Protein-kina 98.2 4.5E-06 9.8E-11 71.3 8.0 104 128-235 8-113 (188)
465 COG2112 Predicted Ser/Thr prot 98.2 1.1E-05 2.5E-10 66.4 8.5 127 87-234 27-156 (201)
466 PF13095 FTA2: Kinetochore Sim 98.1 2.7E-05 5.7E-10 66.4 10.4 138 65-231 25-206 (207)
467 PRK10593 hypothetical protein; 98.1 4.9E-05 1.1E-09 70.2 11.9 76 87-166 19-100 (297)
468 cd05155 APH_ChoK_like_1 Unchar 98.0 3.2E-05 7E-10 68.9 9.8 73 88-167 3-82 (235)
469 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00012 2.6E-09 62.9 12.7 129 87-227 6-165 (199)
470 cd05157 ETNK_euk Ethanolamine 98.0 7.5E-05 1.6E-09 66.5 10.7 73 88-166 4-79 (235)
471 KOG1035 eIF-2alpha kinase GCN2 97.9 4.7E-05 1E-09 79.2 8.8 197 127-357 230-437 (1351)
472 cd05153 HomoserineK_II Homoser 97.7 0.0002 4.2E-09 66.3 10.0 140 88-232 20-204 (296)
473 KOG2268 Serine/threonine prote 97.7 4E-05 8.7E-10 69.3 5.0 148 70-232 77-250 (465)
474 TIGR02721 ycfN_thiK thiamine k 97.7 0.00018 3.8E-09 65.1 9.4 138 89-233 3-175 (256)
475 PRK09550 mtnK methylthioribose 97.7 0.00036 7.7E-09 66.6 11.3 76 88-165 32-117 (401)
476 PRK05231 homoserine kinase; Pr 97.7 0.0016 3.4E-08 60.9 14.8 155 73-232 8-216 (319)
477 COG3173 Predicted aminoglycosi 97.6 0.00056 1.2E-08 62.9 10.9 139 96-236 39-231 (321)
478 cd05156 ChoK_euk Choline Kinas 97.5 0.00042 9.1E-09 64.3 9.2 73 89-167 5-85 (302)
479 TIGR00938 thrB_alt homoserine 97.5 0.0046 1E-07 57.5 14.9 155 74-232 9-216 (307)
480 PF03881 Fructosamin_kin: Fruc 97.2 0.0028 6.1E-08 57.9 10.1 72 88-164 23-97 (288)
481 PLN02236 choline kinase 97.1 0.0044 9.6E-08 58.5 10.3 139 89-233 43-231 (344)
482 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0051 1.1E-07 56.1 10.3 32 203-234 185-217 (276)
483 KOG1826 Ras GTPase activating 97.0 0.00011 2.3E-09 78.6 -1.8 159 126-285 1276-1440(2724)
484 KOG2270 Serine/threonine prote 96.9 0.0088 1.9E-07 55.5 10.3 141 87-235 149-315 (520)
485 PLN02756 S-methyl-5-thioribose 96.7 0.038 8.2E-07 52.8 13.5 73 88-163 38-119 (418)
486 PF07387 Seadorna_VP7: Seadorn 96.6 0.0097 2.1E-07 51.3 7.5 153 93-282 73-225 (308)
487 TIGR02904 spore_ysxE spore coa 96.6 0.02 4.4E-07 53.2 10.4 30 204-233 197-226 (309)
488 PF01633 Choline_kinase: Choli 96.6 0.0077 1.7E-07 52.6 7.1 29 204-232 144-173 (211)
489 TIGR02906 spore_CotS spore coa 96.5 0.029 6.3E-07 52.1 11.1 29 203-232 187-215 (313)
490 TIGR01767 MTRK 5-methylthiorib 96.4 0.034 7.4E-07 52.2 10.7 73 89-163 2-84 (370)
491 PLN02421 phosphotransferase, a 96.2 0.034 7.4E-07 52.2 9.5 138 89-232 21-212 (330)
492 COG2334 Putative homoserine ki 96.2 0.12 2.6E-06 48.3 12.9 138 90-232 34-227 (331)
493 COG5072 ALK1 Serine/threonine 96.1 0.014 3.1E-07 54.1 6.3 72 152-233 299-370 (488)
494 PRK11768 serine/threonine prot 96.0 0.27 5.8E-06 46.1 14.5 93 72-166 11-114 (325)
495 PRK06148 hypothetical protein; 95.9 0.1 2.2E-06 56.6 12.8 30 204-233 204-236 (1013)
496 COG3001 Uncharacterized protei 95.9 0.08 1.7E-06 46.1 9.4 73 90-167 24-99 (286)
497 PRK12396 5-methylribose kinase 95.5 0.071 1.5E-06 50.7 8.6 74 88-163 35-117 (409)
498 PF01102 Glycophorin_A: Glycop 95.1 0.025 5.5E-07 43.9 3.6 31 13-43 64-94 (122)
499 KOG1033 eIF-2alpha kinase PEK/ 95.1 0.0073 1.6E-07 58.1 0.8 74 77-150 44-118 (516)
500 PTZ00384 choline kinase; Provi 95.1 0.16 3.5E-06 48.5 9.8 73 89-167 57-137 (383)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-60 Score=447.50 Aligned_cols=288 Identities=48% Similarity=0.846 Sum_probs=256.5
Q ss_pred cccccCHHHHHHHhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeee
Q 040557 68 TISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147 (407)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 147 (407)
....|++.++..+|++|...+.||+|+||.||+|.+.+|..||||++....... ..+|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 456699999999999999999999999999999999999999999886544432 5669999999999999999999999
Q ss_pred eecCC-eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEe
Q 040557 148 CSDGS-QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIG 226 (407)
Q Consensus 148 ~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~ 226 (407)
|.+.+ +.+||||||++|+|.++++......++|..|++||.++|+||+|||....++|+|||||++|||||+++++||+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 99988 59999999999999999987654379999999999999999999999988899999999999999999999999
Q ss_pred cccCccccCC-CCccccccc-ccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHH
Q 040557 227 DFGLARFFPE-DQAYLSTNF-AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLY 304 (407)
Q Consensus 227 Dfgla~~~~~-~~~~~~~~~-~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 304 (407)
|||+|+..+. .... ... .||.+|+|||++..+..++|+|||||||+|+||+||+++.+...+.....+..|.+..+
T Consensus 220 DFGLa~~~~~~~~~~--~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSV--STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred CccCcccCCccccce--eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 9999976654 2221 122 79999999999999999999999999999999999999998776665666889999999
Q ss_pred HhCccccccCcccccCCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 305 ERGRILELVDPRMRKEGIVE-RDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 305 ~~~~~~~~~d~~~~~~~~~~-~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.++.+.+++|+.+....... .....+..++.+|++.+|++||+|.||+++|...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 99999999999997444443 6788899999999999999999999999999543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-51 Score=383.69 Aligned_cols=256 Identities=32% Similarity=0.513 Sum_probs=211.6
Q ss_pred CCCCeeeccCCccEEEEEecCCcE-EEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-eeEEEEEec
Q 040557 85 HPGNLLGRGGFGPVYRGKLADGTL-VAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS-QRLLVYEYM 161 (407)
Q Consensus 85 ~~~~~lg~G~~g~Vy~~~~~~~~~-vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~ 161 (407)
...+.||+|+||+||+|.+. |.. ||||++.... .......|.+|+.+|.+++|||||+++|+|.+.. ..++||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhcccCCceeEEEEEeC-CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 33456999999999999996 555 9999996543 2222678999999999999999999999999887 799999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-ceEEecccCccccCCCCcc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-QSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~~~ 240 (407)
++|+|..+++......+++..+++++.|||+||.|||+.+. ||||||||.|||++.++ ++||+|||+++...... .
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~ 199 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-T 199 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc-c
Confidence 99999999987556679999999999999999999999863 99999999999999997 99999999998765432 2
Q ss_pred cccccccCccccCccccc--cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 241 LSTNFAGTLGYTAPEYAI--RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~--~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
..+...||+.|||||++. ...|+.|+||||||+++|||+||+.||....+. .........+.
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~------~~~~~v~~~~~---------- 263 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV------QVASAVVVGGL---------- 263 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcCC----------
Confidence 233468999999999999 669999999999999999999999999865431 11222222221
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
....+..++..+..++.+||+.||+.||++.+++..|+....
T Consensus 264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 112233366779999999999999999999999999986654
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-52 Score=367.85 Aligned_cols=257 Identities=27% Similarity=0.391 Sum_probs=215.0
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-eeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS-QRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 160 (407)
+.+..+.||+|..|+||+++++ +++.+|+|.+.........+++.+|+++++.++||+||.++|+|.+.. ...++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3445678999999999999875 689999999977777777889999999999999999999999999888 59999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|++|+|+.++... +.+++....+++.++++||.|||. .+ |+||||||+|||++..|++||||||.+..+.+.
T Consensus 160 MDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred cCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 9999999998543 559999999999999999999996 55 999999999999999999999999999987655
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
...+++||..|||||.+.+..|+.++||||||+.++|+.+|+.|+....+..... .+... .+++...
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~-~~Ll~---------~Iv~~pp-- 299 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDI-FELLC---------AIVDEPP-- 299 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCH-HHHHH---------HHhcCCC--
Confidence 3457899999999999999999999999999999999999999987652221111 11111 1111111
Q ss_pred CCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 320 EGIVE-RDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 320 ~~~~~-~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
...+. ..+.++.+++..||++||.+|||+.|+++|-+-..
T Consensus 300 P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 300 PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence 01222 36678999999999999999999999999987553
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-51 Score=383.02 Aligned_cols=253 Identities=28% Similarity=0.435 Sum_probs=217.1
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
..|..++.||+|||++||.++. .+|+.||+|++.+.. .....+.+.+|+++.+.|+|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999986 789999999997643 3445567899999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
|+|.+++|.+++. .++.+++.++..++.||+.||.|||+++ |+|||||..|+||+++.++||+|||||..+..+.
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 9999999999985 5677999999999999999999999998 9999999999999999999999999999887553
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. ...+.+|||.|+|||++....++..+||||+|||+|-|++|++||+... +.+.+..-+..+
T Consensus 173 E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~----------vkety~~Ik~~~------- 234 (592)
T KOG0575|consen 173 E-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT----------VKETYNKIKLNE------- 234 (592)
T ss_pred c-ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch----------HHHHHHHHHhcC-------
Confidence 2 3456899999999999999999999999999999999999999997432 111111111111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
...+.....+..+||..+|+.||.+|||+++|+.|-.+.
T Consensus 235 -Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 235 -YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred -cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 112334456788999999999999999999999998763
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-50 Score=373.03 Aligned_cols=251 Identities=32% Similarity=0.469 Sum_probs=214.2
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
.+.||+|.||.||.|.+.....||+|.++.. ....+.|.+|+++|++|+|+|||+++|+|..+...+||||||+.|+|
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecc--ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 4679999999999999977779999999654 34456788999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
.+++....+..+.....+.++.|||+||+||++++ +|||||.++||||+++..+||+|||||+...++.........
T Consensus 289 l~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k 365 (468)
T KOG0197|consen 289 LDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK 365 (468)
T ss_pred HHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence 99998767788999999999999999999999998 999999999999999999999999999977777766666666
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVER 325 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 325 (407)
-+..|.|||.+..+.++.|||||||||+||||+| |+.|+.... ...+.+.++.|- ++. .+..
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-------n~ev~~~le~Gy-------Rlp---~P~~ 428 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-------NEEVLELLERGY-------RLP---RPEG 428 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-------HHHHHHHHhccC-------cCC---CCCC
Confidence 7889999999999999999999999999999999 444543322 122333344332 222 3455
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 326 DALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 326 ~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
++..+.+++..||+.+|++|||++.+...|+...
T Consensus 429 CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 429 CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 7788999999999999999999999988887543
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-50 Score=361.55 Aligned_cols=259 Identities=24% Similarity=0.315 Sum_probs=210.8
Q ss_pred HhcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChh------hHHHHHHHHHHHHcCCCCceeeeeeeeecCC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQ------GESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 152 (407)
..+.|.+.+.||+|+||.|-+|. .++|+.||||++....... ....+.+|+++|++++|||||++.+++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 44678888999999999999997 4579999999997643221 2334679999999999999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC---CceEEeccc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK---FQSKIGDFG 229 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~---~~~kl~Dfg 229 (407)
..|+||||++||+|.+.+-.+ +.+.+..-.-++.|++.|+.|||+.| |+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 999999999999999988543 44777777889999999999999999 9999999999999866 789999999
Q ss_pred CccccCCCCcccccccccCccccCccccccCCC---CccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL---SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER 306 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 306 (407)
+|+..... ....+.|||+.|.|||++.++.. ..++|+||+||+||-+++|.+||....... -..+.+..
T Consensus 325 lAK~~g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~------sl~eQI~~ 396 (475)
T KOG0615|consen 325 LAKVSGEG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP------SLKEQILK 396 (475)
T ss_pred hhhccccc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc------cHHHHHhc
Confidence 99988743 34567899999999999987643 458899999999999999999997654331 01222333
Q ss_pred CccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 307 GRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 307 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
|+.... ...-.....+..++|.+||..||++|||+.|+++|.|..
T Consensus 397 G~y~f~-------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 397 GRYAFG-------PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred Cccccc-------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 332210 011223567789999999999999999999999999975
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3e-49 Score=354.26 Aligned_cols=203 Identities=32% Similarity=0.548 Sum_probs=182.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.+|...+.||.|+||+||+|++. ++..||||.+.... .....+.+..|+.+|+.++|||||++++++.+++..|+|||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 56777888999999999999864 58999999997665 55666778899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC------CceEEecccCccc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK------FQSKIGDFGLARF 233 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~------~~~kl~Dfgla~~ 233 (407)
||.||+|..+++.. +.+++.+...++.|+|.||++||+++ |+||||||.||||+.. -.+||+|||+|+.
T Consensus 90 yC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred eCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 99999999999654 46999999999999999999999999 9999999999999865 4689999999999
Q ss_pred cCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCc
Q 040557 234 FPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS 291 (407)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~ 291 (407)
+.... ...+.+|++.|||||+++..+|+.|+|+||+|++||++++|+.||+...+.
T Consensus 165 L~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~ 220 (429)
T KOG0595|consen 165 LQPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK 220 (429)
T ss_pred CCchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence 87543 345789999999999999999999999999999999999999999865544
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.4e-49 Score=383.87 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=218.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
.+....+.||+|+||.||+|+.. +...||||.++.....+...+|.+|+++|+.++|||||+++|.|..++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 45555678999999999999743 346799999988777778899999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccC--------C----CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCce
Q 040557 156 LVYEYMKNRSLDLLIYGES--------D----KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS 223 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~--------~----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~ 223 (407)
+|+|||..|||.++|.... + ..|+..+.+.||.|||.||+||-++. +|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEE
Confidence 9999999999999996432 1 23889999999999999999999988 9999999999999999999
Q ss_pred EEecccCccccCCCCccccc-ccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHH
Q 040557 224 KIGDFGLARFFPEDQAYLST-NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 224 kl~Dfgla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~ 301 (407)
||+||||++..-..+++... +..-+.+||+||.++.++||++||||||||+|||++| |+.|+.+... +.+-
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-------~EVI 715 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-------QEVI 715 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-------HHHH
Confidence 99999999977655555433 4556789999999999999999999999999999998 5666654332 3344
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+.+..|++. ..++.++..+++|+..||+.+|.+||+++||-..|...
T Consensus 716 e~i~~g~lL----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 716 ECIRAGQLL----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred HHHHcCCcc----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 555656543 24566788899999999999999999999999988754
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-50 Score=342.37 Aligned_cols=258 Identities=25% Similarity=0.412 Sum_probs=208.3
Q ss_pred cCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeee-eecCCe-eEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGC-CSDGSQ-RLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~~~-~~lv 157 (407)
.+|.+.++||.|+||+||++. ..+|..+|.|.+.... +....+.+..|+.+|++|+|||||+++++ +...+. +++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 345666789999999999996 6789999999986443 44556788999999999999999999984 444444 8999
Q ss_pred EEeccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccccC-CCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 158 YEYMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHEDS-HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
||||.+|+|..++.. ...+.+++..+|+++.|++.||..+|+.- ...|+||||||.||+|+.+|.|||+||||++++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999998853 33567999999999999999999999932 123999999999999999999999999999999
Q ss_pred CCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 235 PEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
...... ....+|||.||+||.+.+..|+.||||||+||++|||+.-++||.+.. + ....+.+..+...
T Consensus 179 ~s~~tf-A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n------~-~~L~~KI~qgd~~---- 246 (375)
T KOG0591|consen 179 SSKTTF-AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN------L-LSLCKKIEQGDYP---- 246 (375)
T ss_pred cchhHH-HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc------H-HHHHHHHHcCCCC----
Confidence 776654 456899999999999999999999999999999999999999998652 1 1122233333211
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+ ..+..+.++..|+..|+..||+.||+...++..+.
T Consensus 247 -~~----p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 247 -PL----PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -CC----cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 11 11456778999999999999999998555554443
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-48 Score=343.21 Aligned_cols=253 Identities=23% Similarity=0.316 Sum_probs=209.8
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
.++|++.++||+|+||.||+++. ++++.+|+|++++... .........|..+|.+++||.||+++..|.+...+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 46789999999999999999975 4689999999976542 23467788999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
+||+.||.|..++. +...+++..+..++.+|+.||.|||+.+ |+||||||+|||||++|.++|+||||++.....
T Consensus 104 ld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 99999999999995 3445899999999999999999999999 999999999999999999999999999965443
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. .+.+++||+.|||||++.+..|+..+|.||+|+++|||++|.+||...... .+..+... ++ +
T Consensus 179 ~~-~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~I~~-~k--------~ 242 (357)
T KOG0598|consen 179 GD-ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDKILK-GK--------L 242 (357)
T ss_pred CC-ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHHHhc-Cc--------C
Confidence 32 234589999999999999999999999999999999999999999865432 22222222 22 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCC----CHHHHHHHhh
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRP----PMSEIVAMLT 356 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RP----s~~ev~~~l~ 356 (407)
. ..+.-.+.+..+++...|+.||++|. .+.+|.+|-.
T Consensus 243 ~--~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hpf 283 (357)
T KOG0598|consen 243 P--LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPF 283 (357)
T ss_pred C--CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcc
Confidence 0 11222445688999999999999995 5777766644
No 11
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-47 Score=342.82 Aligned_cols=260 Identities=29% Similarity=0.422 Sum_probs=208.8
Q ss_pred hcCCCCCCeeeccCCccEEEEEecC-CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC--eeEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS--QRLLV 157 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 157 (407)
..+|..++.||+|+||+||++...+ |...|||.+....... .+.+.+|+.+|.+++|||||+++|...... .+++.
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 3567778999999999999998654 8999999986553333 567889999999999999999999855444 68999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-CCceEEecccCccccCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-KFQSKIGDFGLARFFPE 236 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~~~ 236 (407)
|||+++|+|.+++....+ .+++..+..++.||++||.|||+++ ++||||||+|||++. ++.+||+|||++.....
T Consensus 95 mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999999977666 7999999999999999999999998 999999999999999 79999999999987763
Q ss_pred --CCcccccccccCccccCccccccCC-CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 237 --DQAYLSTNFAGTLGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 237 --~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
..........||+.|||||++..+. ...++|||||||++.||+||++||.... ....+.......+..
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~-----~~~~~~~~ig~~~~~---- 241 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF-----EEAEALLLIGREDSL---- 241 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc-----chHHHHHHHhccCCC----
Confidence 2222234578999999999998643 3459999999999999999999987430 001111221111111
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
| ..+...+.+..+++..|++.||++|||++++++|......
T Consensus 242 -P-----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 242 -P-----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred -C-----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 1 2334456678899999999999999999999999865443
No 12
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-46 Score=338.23 Aligned_cols=268 Identities=23% Similarity=0.328 Sum_probs=218.7
Q ss_pred hcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.+.|++.+.||.|..++||+|+ .+.++.||||++..++.......+.+|+..|+.++||||++++..|..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3678889999999999999997 567899999999988877778899999999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC-
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ- 238 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~- 238 (407)
||.+|++.+++...-...+++..+..|+.++++||.|||++| .||||||+.||||+++|.|||+|||.+..+-...
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 999999999998777777999999999999999999999999 9999999999999999999999999987654322
Q ss_pred --cccccccccCccccCcccccc--CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 239 --AYLSTNFAGTLGYTAPEYAIR--GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 239 --~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
......++||+.|||||+++. ..|+.|+||||||++..||.+|..||....+... ....++ +......-
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv------Ll~tLq-n~pp~~~t 254 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV------LLLTLQ-NDPPTLLT 254 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH------HHHHhc-CCCCCccc
Confidence 111155789999999999554 4799999999999999999999999976554321 111111 11111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
... ...........+.+++..||+.||++|||+++++++-.+..
T Consensus 255 ~~~-~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~ 298 (516)
T KOG0582|consen 255 SGL-DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK 298 (516)
T ss_pred ccC-ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence 000 00111223457889999999999999999999998866544
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9e-48 Score=367.73 Aligned_cols=257 Identities=26% Similarity=0.447 Sum_probs=214.0
Q ss_pred CCCCCeeeccCCccEEEEEec----CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
..+.++||.|.||.||+|+++ ....||||.++.........+|+.|+.+|.+.+||||++|.|+.......++|+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 456778999999999999875 2457999999887788888899999999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
||+||+|+.+|+.+.++ +++.+..-++.+||.||.||.+.+ +|||||..+|||++.+..+|++||||++.+.++..
T Consensus 711 yMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 99999999999876655 899999999999999999999998 99999999999999999999999999998866553
Q ss_pred cccc--ccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 240 YLST--NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 240 ~~~~--~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
...+ ...-+.+|.|||.+...++|.+||||||||++||.++ |.+|+=.... .+ +-+.++ ..
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN------Qd-VIkaIe---------~g 850 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN------QD-VIKAIE---------QG 850 (996)
T ss_pred ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch------HH-HHHHHH---------hc
Confidence 3222 2334579999999999999999999999999999887 5555421111 11 111122 11
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
.+- ..+.+++..|.+|+++|||+|-.+||++.+|+.+|...+..
T Consensus 851 yRL-PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 851 YRL-PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred cCC-CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 221 14456788899999999999999999999999999876543
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2e-46 Score=323.39 Aligned_cols=268 Identities=21% Similarity=0.322 Sum_probs=207.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
+.|+...++|+|+||.||+++++ +|+.||||+|..... ..-.+-.++|+++|++++|+|+|.++.+|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 34666778999999999999976 599999999976554 3344567899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
||+..-|.++-+ ....++.....+++.|++.|+.|+|+++ ++||||||+|||++.++.+||||||+|+.+... .
T Consensus 82 ~~dhTvL~eLe~--~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-g 155 (396)
T KOG0593|consen 82 YCDHTVLHELER--YPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP-G 155 (396)
T ss_pred ecchHHHHHHHh--ccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC-c
Confidence 999866655542 3445899999999999999999999998 999999999999999999999999999988742 2
Q ss_pred ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchh--------HHHHHHHHhCcc-
Q 040557 240 YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP--------EYAWKLYERGRI- 309 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~- 309 (407)
..-+..+.|.+|.|||.+.+ .+|...+||||+||++.||++|.+.|.+...-+.-+.. -.-.+.+..+..
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 23356789999999999887 78999999999999999999999988655432211110 001112222211
Q ss_pred c-----cccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 310 L-----ELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 310 ~-----~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. +.-++......++ ....-+++++..||+.||.+|++-++++.|-.
T Consensus 236 ~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~y 286 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHHPY 286 (396)
T ss_pred eeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcChH
Confidence 1 1111111111111 23346789999999999999999999987644
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=342.47 Aligned_cols=268 Identities=26% Similarity=0.390 Sum_probs=214.4
Q ss_pred HhcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCC-eeEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGS-QRLL 156 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~l 156 (407)
..++|...++||.|.||+||+|+ ..+|..||||+++..-....+-.=++|+..|++++ ||||+++...+.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 34677778899999999999997 45799999999976554444444579999999998 999999999998888 9999
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
|||||+. +|.+++..+ ++.+++..+..|+.||++||+|+|.+| +.|||+||+|||+..+..+||+|||+|+....
T Consensus 88 VfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc
Confidence 9999976 899999876 778999999999999999999999999 99999999999999888999999999998876
Q ss_pred CCcccccccccCccccCccccc-cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH----------
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE---------- 305 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------- 305 (407)
...+ +..+.|.+|.|||++. .+.|+.+.|+||+|||++|+.+-++.|-+...- +.+++.++
T Consensus 163 kpPY--TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~------Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 163 KPPY--TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI------DQIYKICEVLGTPDKDSW 234 (538)
T ss_pred CCCc--chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH------HHHHHHHHHhCCCccccc
Confidence 6654 5678999999999876 478899999999999999999999887654321 12222221
Q ss_pred -hC-ccccccCcc---ccc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 306 -RG-RILELVDPR---MRK---EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 306 -~~-~~~~~~d~~---~~~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
+| .+...+.-. +.. .........+.++++.+|+.+||++|||+.+.++|.-+...
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 00 111111111 111 01222366789999999999999999999999999765543
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-46 Score=348.25 Aligned_cols=253 Identities=25% Similarity=0.398 Sum_probs=214.0
Q ss_pred cCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
..|....+||+|+.|.||.++ ..+++.||||++... .+...+.+.+|+.+|+..+|+|||++++.|...+.+|+||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~-~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR-KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEec-cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 456667889999999999996 557899999999644 344556788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
|+||+|.+.+... .+++..+..|+.+++.||+|||.++ |+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 352 m~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred cCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence 9999999998433 3899999999999999999999999 99999999999999999999999999998876654
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....+||+.|||||++..+.|+.|.||||||++++||+-|.+||-...+- ...+.....|. +.++
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl------rAlyLIa~ng~------P~lk-- 490 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLIATNGT------PKLK-- 490 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH------HHHHHHhhcCC------CCcC--
Confidence 345689999999999999999999999999999999999999998754332 11222222222 2222
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.++..+..+.+++.+||+.|+++||++.|+|+|--.
T Consensus 491 -~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl 526 (550)
T KOG0578|consen 491 -NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFL 526 (550)
T ss_pred -CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence 334456779999999999999999999999998644
No 17
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-46 Score=372.82 Aligned_cols=261 Identities=31% Similarity=0.477 Sum_probs=216.3
Q ss_pred hcCCCCCCeeeccCCccEEEEEecC--Cc----EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLAD--GT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 154 (407)
..+.+..+.||+|+||.||.|...+ |. .||+|.++...+.+...+|++|..+|+.++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3556677899999999999997643 43 49999998888888999999999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHHhccC-----CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEeccc
Q 040557 155 LLVYEYMKNRSLDLLIYGES-----DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
++++|||++|+|..++...+ ...++....+.++.|||+|+.||++++ +|||||..+|+||++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999997552 356899999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCCccccccc-ccCccccCccccccCCCCccccEEehhHHHHHHHhc-CCCCCCCCCcccCchhHHHHHHHHhC
Q 040557 230 LARFFPEDQAYLSTNF-AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISC-RKNTDLTLPSEMQYLPEYAWKLYERG 307 (407)
Q Consensus 230 la~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 307 (407)
||+.+.....+..... .-...|||||.+..+.+|.|+|||||||++||++|. ..|+...... +........|
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~------~v~~~~~~gg 921 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF------EVLLDVLEGG 921 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH------HHHHHHHhCC
Confidence 9996665555544433 445689999999999999999999999999999995 4454322211 1111123333
Q ss_pred ccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 308 RILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 308 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
+ +. .+..++..+++++.+||+.+|++||++..|++.+..+...
T Consensus 922 R--------L~---~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 922 R--------LD---PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred c--------cC---CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 2 21 3445677899999999999999999999999988765543
No 18
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=340.61 Aligned_cols=256 Identities=26% Similarity=0.363 Sum_probs=212.4
Q ss_pred HhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC---h-hhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCe
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS---Q-QGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 153 (407)
..++|.+++.||+|+||+|+.|.. .+|..||+|.+..... . ...+.+.+|+.+++.++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 347899999999999999999974 4689999997755311 1 23456678999999998 9999999999999999
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC-CceEEecccCcc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK-FQSKIGDFGLAR 232 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgla~ 232 (407)
.++||||+.||+|.+++.. ...+.+..+..++.|++.|++|||+.+ |+||||||+|||++.+ +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 9999999999999999965 456889999999999999999999999 9999999999999999 999999999999
Q ss_pred ccCCCCcccccccccCccccCccccccCC-CC-ccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccc
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIRGE-LS-EKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRIL 310 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (407)
... .......+.+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||+.... ...... +..+..
T Consensus 170 ~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~------~~l~~k-i~~~~~- 240 (370)
T KOG0583|consen 170 ISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV------PNLYRK-IRKGEF- 240 (370)
T ss_pred ccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH------HHHHHH-HhcCCc-
Confidence 874 2223345689999999999999977 85 789999999999999999999986221 111221 222211
Q ss_pred cccCcccccCCCCHHH-HHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 311 ELVDPRMRKEGIVERD-ALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 311 ~~~d~~~~~~~~~~~~-~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.++... ..++..++.+|++.||.+|+|+.+|+++-|...
T Consensus 241 ----------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 241 ----------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ----------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 111222 566889999999999999999999999999876
No 19
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.3e-45 Score=344.95 Aligned_cols=260 Identities=28% Similarity=0.439 Sum_probs=205.5
Q ss_pred hcCCCCCCeeeccCCccEEEEEe------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecC-C
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDG-S 152 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 152 (407)
.++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+|+.++..+ +||||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 36788899999999999999963 235689999987554445566789999999999 899999999988764 4
Q ss_pred eeEEEEEeccCCChhHHHhccC----------------------------------------------------------
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES---------------------------------------------------------- 174 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 174 (407)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 5789999999999999886432
Q ss_pred --CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc-ccccccCccc
Q 040557 175 --DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGY 251 (407)
Q Consensus 175 --~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y 251 (407)
...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++......... .....++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 134788899999999999999999988 9999999999999999999999999998654332221 2234467789
Q ss_pred cCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHH
Q 040557 252 TAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQV 330 (407)
Q Consensus 252 ~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 330 (407)
+|||.+.+..++.++|||||||++|||++ |..||...... .........+... . .+...+..+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~------~~~~~~~~~~~~~-----~-----~~~~~~~~l 306 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN------EEFCQRLKDGTRM-----R-----APENATPEI 306 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc------HHHHHHHhcCCCC-----C-----CCCCCCHHH
Confidence 99999999999999999999999999997 89888653221 1111222222111 0 112234568
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 331 INVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 331 ~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.+++.+||+.||++|||+.++++.|+...
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 89999999999999999999999997543
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-45 Score=337.36 Aligned_cols=266 Identities=25% Similarity=0.393 Sum_probs=209.6
Q ss_pred cCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChh-hHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 157 (407)
+.|+..++||+|.||.||+|+ ..+|+.||+|++..+.... .-.-..+|+.+|++|+||||+++.+...+. ..+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 456667789999999999997 4679999999998766333 334567999999999999999999988766 689999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
+|||+. +|.-++... .-.+++.++..++.|++.||+|||+.+ |.|||||.+|||||++|.+||+|||||+++...
T Consensus 197 FeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred Eecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 999987 777777543 334899999999999999999999999 999999999999999999999999999998877
Q ss_pred CcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC--------c
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG--------R 308 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~ 308 (407)
.....++.+-|.+|.|||.+.+ ..|+.++|+||.||||.||++|++.+.+...-+ .+ +-+.+++..- +
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve--Ql-~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE--QL-HKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH--HH-HHHHHHhCCCChhcccccc
Confidence 7666778899999999999887 479999999999999999999999886543211 11 1111111110 1
Q ss_pred cc--cccCc------ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 309 IL--ELVDP------RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 309 ~~--~~~d~------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
+. ..+.+ .+.. .....+...++|+..+|..||++|.|+.+++++-.+
T Consensus 349 LP~~~~~kp~~~y~r~l~E--~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRE--TFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred CCcccccCCCCcccchHHH--HhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 11 01100 0100 011123567889999999999999999999998877
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-45 Score=340.56 Aligned_cols=258 Identities=24% Similarity=0.311 Sum_probs=212.6
Q ss_pred HHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCe
Q 040557 78 KKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 78 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 153 (407)
++..++|..++.||.|+|++|++|+. ..++.||||++.+.. .+....-+..|-++|.+| .||.|++|+-.|.|...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34457899999999999999999974 569999999986442 222334567899999999 89999999999999999
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
+|+|+||++||+|.+++.. -+.+++.....++.+|+.||+|||+.| ||||||||+|||||.++.++|+|||.|+.
T Consensus 149 LYFvLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred eEEEEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeecccccc
Confidence 9999999999999999954 356999999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCcc----------c--ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHH
Q 040557 234 FPEDQAY----------L--STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 234 ~~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~ 301 (407)
++..... . ...++||..|.+||++..+..+..+|+|+|||+||+|+.|++||.....- + ...
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----l--iFq 297 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----L--IFQ 297 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----H--HHH
Confidence 7532221 1 14588999999999999999999999999999999999999999754321 0 111
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+.+. +|.. +++..++.+.+|+.+.|..||++|+|..+|.+|.-+.
T Consensus 298 kI~~-------l~y~-----fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 298 KIQA-------LDYE-----FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred HHHH-------hccc-----CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 1111 1111 2333446788999999999999999999999886543
No 22
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-46 Score=337.97 Aligned_cols=251 Identities=26% Similarity=0.413 Sum_probs=214.8
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
..|+..+.||+|+||.||+|.. ..++.||+|++..+......+++.+|+.+|.+++++||.+++|.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3466668899999999999974 468999999999888888888999999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
|.||++.+.+. .+..+++....-++.+++.|+.|||.++ .+|||||+.|||+..+|.+||+|||.+..+......
T Consensus 93 ~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 93 CGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred hcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 99999999984 4445588888889999999999999998 999999999999999999999999999988766554
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
. .+++||+.|||||++....|+.|+||||||++.+||++|.+|+....|....++ +.+-..|.+.
T Consensus 168 r-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl------------Ipk~~PP~L~-- 232 (467)
T KOG0201|consen 168 R-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL------------IPKSAPPRLD-- 232 (467)
T ss_pred c-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe------------ccCCCCCccc--
Confidence 4 678999999999999988999999999999999999999999976555322111 0111112222
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
......+.+++..||+.||+.||++.++++|-
T Consensus 233 ---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 233 ---GDFSPPFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred ---cccCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 23456688999999999999999999999873
No 23
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-46 Score=343.52 Aligned_cols=238 Identities=26% Similarity=0.420 Sum_probs=199.1
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
++-||+|+.|.||.|++. ++.||||+++.-+ ..++.-|++|+|+||+.+.|+|.....+|||||||..|-|
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 467999999999999995 7889999874222 2467889999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
...++ .+..+......+|..+||.||.|||.+. |||||||+-||||..+..|||+|||-++...+.. ....++
T Consensus 200 ~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S--TkMSFa 272 (904)
T KOG4721|consen 200 YEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS--TKMSFA 272 (904)
T ss_pred HHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhh--hhhhhh
Confidence 99994 4556888999999999999999999998 9999999999999999999999999999776553 234688
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
||-.|||||++.+.+.++|+||||||||||||+||..|+..-...- .+|. + ......-..+..+
T Consensus 273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA------IIwG---------V-GsNsL~LpvPstc 336 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA------IIWG---------V-GSNSLHLPVPSTC 336 (904)
T ss_pred hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe------eEEe---------c-cCCcccccCcccC
Confidence 9999999999999999999999999999999999999985322110 0111 0 0111111244556
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 327 ALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+.-+.-|+++||+..|.+||++++|+.||.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 667788899999999999999999999986
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-45 Score=342.91 Aligned_cols=266 Identities=26% Similarity=0.442 Sum_probs=213.0
Q ss_pred HHHHHHhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCe
Q 040557 75 QTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 75 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 153 (407)
++++...+.+.++..||+|.||+||+|++. ..||||++.... ..+..+.|++|+..+++-+|.||+-+.|||..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 344455566778899999999999999984 359999998765 44567899999999999999999999999988877
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.+|+-+|+|.+|..++|.... .++..+.++|+.||++||.|||.++ |||||||++||++.++++|||+||||+..
T Consensus 463 -AIiTqwCeGsSLY~hlHv~et-kfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQET-KFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred -eeeehhccCchhhhhccchhh-hhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceee
Confidence 999999999999999987664 4899999999999999999999999 99999999999999999999999999975
Q ss_pred cCCC-CcccccccccCccccCcccccc---CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc
Q 040557 234 FPED-QAYLSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI 309 (407)
Q Consensus 234 ~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (407)
...- .........|...|||||++.. .+|+..+||||||+|+|||+||..|+.....+..-+. +..|-
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifm-------VGrG~- 609 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFM-------VGRGY- 609 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEE-------ecccc-
Confidence 4311 1111123457789999999874 5789999999999999999999999974433221111 11111
Q ss_pred ccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 310 LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
-. +++. ....+++..+.+|+..||..++++||.+.+|+..|+.+..
T Consensus 610 -l~--pd~s--~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 610 -LM--PDLS--KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred -cC--ccch--hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 11 1111 1234566789999999999999999999999998876543
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.9e-45 Score=307.98 Aligned_cols=276 Identities=24% Similarity=0.377 Sum_probs=213.3
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhh-HHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.+|...+.||+|.||.||+|+. .+|+.||||+++.....++ .....+|+..|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 3566678899999999999984 5799999999987654433 3467899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
||+. +|+..++. +...++...+..++.++++|++|||++. |+||||||+|+|++++|.+||+|||+|+.+.....
T Consensus 82 fm~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred eccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 9976 88888864 3456899999999999999999999998 99999999999999999999999999999876554
Q ss_pred ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc------ccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI------LEL 312 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 312 (407)
... ..+-|..|.|||.+.+ ..|+..+|+||.||++.||+-|.+-|.+...-+ .+ ..+.+.+..-.. ..+
T Consensus 157 ~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid--QL-~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 157 IQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID--QL-SKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred ccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH--HH-HHHHHHcCCCCcccCcccccc
Confidence 433 2378999999998887 579999999999999999999887665433211 11 111111111100 011
Q ss_pred cC-------cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCCCCCCc
Q 040557 313 VD-------PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIPVRP 367 (407)
Q Consensus 313 ~d-------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~~~~~p 367 (407)
.| |.......-.....++++++..++..||.+|+|+.|+++|-.+.. .+.|..|
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~-~P~pt~~ 293 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS-LPLPTPP 293 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc-CCCCCCh
Confidence 11 111111122334566799999999999999999999999988754 4444433
No 26
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=344.92 Aligned_cols=261 Identities=30% Similarity=0.406 Sum_probs=210.0
Q ss_pred HhcCCCCCCeeeccCCccEEEEEecC--C--cE-EEEEEecc--ccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLAD--G--TL-VAVKKLCV--DKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~--~~-vavK~~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 152 (407)
..++....++||+|+||.||+|++.. + .. ||||.... ........+|++|+++|++++|||||+++|++....
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34566677999999999999998642 2 23 89999874 235677889999999999999999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
++++|||+|.||+|.+++..... .++..++..++.+.|.||+|||+++ ++||||..+|+|++.++.+||+||||++
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCcccccc
Confidence 99999999999999999965443 5999999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHH-HhCccc
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLY-ERGRIL 310 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 310 (407)
.... .........-+..|+|||.+..+.|+.++|||||||++||+++ |..|+.+.... .+...+ ..+.
T Consensus 311 ~~~~-~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-------~v~~kI~~~~~-- 380 (474)
T KOG0194|consen 311 AGSQ-YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-------EVKAKIVKNGY-- 380 (474)
T ss_pred CCcc-eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-------HHHHHHHhcCc--
Confidence 6541 1111112235679999999999999999999999999999998 77777643322 122222 2111
Q ss_pred cccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCC
Q 040557 311 ELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362 (407)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~ 362 (407)
++. .+...+..+..++.+||..+|++||||.++.+.++......
T Consensus 381 -----r~~---~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 381 -----RMP---IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred -----cCC---CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 111 22234566888899999999999999999999998765543
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-45 Score=342.58 Aligned_cols=255 Identities=24% Similarity=0.286 Sum_probs=216.0
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.-|++++.||+|+.|.|-.|++ .+|+.+|||.+.+.. .......+.+|+-+|+.+.|||++++++++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4588899999999999999985 579999999997652 2233456789999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|.|.+++. ..+.+++.++.+++.||+.|+.|||..+ |+||||||+|+|||..+++||+|||+|..-..+.
T Consensus 92 Eyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 92 EYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 9999999999984 4456999999999999999999999998 9999999999999999999999999998765544
Q ss_pred cccccccccCccccCccccccCCC-CccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
- -.+.||.+.|.|||++++.+| ..++||||+|||||.|+||+.||+.+. ...+...+..|..
T Consensus 167 l--LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-------ir~LLlKV~~G~f-------- 229 (786)
T KOG0588|consen 167 L--LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-------IRVLLLKVQRGVF-------- 229 (786)
T ss_pred c--ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-------HHHHHHHHHcCcc--------
Confidence 3 346799999999999999988 579999999999999999999998322 2223333444432
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
..+...+.++.+|+.+|+..||++|.|+.||++|.+-....
T Consensus 230 ---~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 230 ---EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred ---cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 23445566788999999999999999999999999865544
No 28
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-45 Score=337.96 Aligned_cols=264 Identities=23% Similarity=0.392 Sum_probs=212.9
Q ss_pred hcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.+...+.++||+|-||.|.++....+..||||.++.........+|.+|+++|.+++||||++++|+|..++.+++++||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 35567788999999999999998778999999998877777778999999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
|++|+|.+++..+....+.-....+|+.||+.||+||.+.+ ++||||.++|+|++.++++||+|||+++.+-....+
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCce
Confidence 99999999997665444556667789999999999999988 999999999999999999999999999966554444
Q ss_pred c-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh--cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 241 L-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 241 ~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
. ....+-+.+|||+|.+..+++|++||||+||+++||+++ ...|+....... ..+-.-.+...+.....+
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~~~~l---- 766 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGRQVVL---- 766 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCcceec----
Confidence 3 334567889999999999999999999999999999875 445554221110 011111111111111110
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+.-++..+++++..||..|.++||+++++..+|..
T Consensus 767 ---~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 767 ---SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred ---cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 1233456778999999999999999999999998864
No 29
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.4e-44 Score=329.92 Aligned_cols=256 Identities=25% Similarity=0.344 Sum_probs=206.8
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.|+..+.||+|+||.||+|.. .+|+.||+|.+..... ......+.+|+.++..++|+||+++.+++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 366778999999999999985 5799999999864332 2334567899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++|+|..++.......+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||++........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence 999999998886555556899999999999999999999998 99999999999999999999999999987643322
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.....||..|+|||.+.+..++.++|||||||++|||++|+.||........ ............
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~----------- 221 (285)
T cd05631 158 --VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK---REEVDRRVKEDQ----------- 221 (285)
T ss_pred --ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh---HHHHHHHhhccc-----------
Confidence 2345789999999999999999999999999999999999999975433211 111111111100
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~ 357 (407)
.......+..+.+|+.+||+.||++||+ ++++++|-+.
T Consensus 222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~ 264 (285)
T cd05631 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIF 264 (285)
T ss_pred ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhh
Confidence 0112223456889999999999999997 8999998765
No 30
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.9e-45 Score=340.75 Aligned_cols=249 Identities=25% Similarity=0.375 Sum_probs=210.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.. .......+.+|+++++.++||||+.++++|+...+.|+|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46788889999999999999754 68899999986543 44456778999999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+.| +|..++. .++.++++.+..++.+++.||.|||+++ |.|||+||.|||++.++.+|++|||+|+.+..+..
T Consensus 82 ~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 82 YAVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred hhhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCce
Confidence 9987 9999994 4556999999999999999999999998 99999999999999999999999999998766443
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
..+...|||.|||||...+.+|+..+|.||+||++||+.+|++||....- ...+..... |+.
T Consensus 156 -vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si------~~Lv~~I~~--------d~v--- 217 (808)
T KOG0597|consen 156 -VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI------TQLVKSILK--------DPV--- 217 (808)
T ss_pred -eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH------HHHHHHHhc--------CCC---
Confidence 44567899999999999999999999999999999999999999863211 111111111 111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
..+......+.+++...|++||..|.|..+++.|-
T Consensus 218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred -CCcccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 12335567789999999999999999999999874
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-45 Score=313.63 Aligned_cols=250 Identities=25% Similarity=0.301 Sum_probs=211.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|+..+.||.|+||.|.+++.+ +|..+|+|++.+.. ...+.+...+|..+|+.+.||.++++++.+.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56777889999999999999854 68999999996543 3345567889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||++||.|..+++ +.+.+++..+..++.||+.|++|||+.+ |++|||||+|||+|.+|.+||+|||.|+......
T Consensus 124 eyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred eccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 9999999999995 4456999999999999999999999998 9999999999999999999999999999876653
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
-+.||||.|+|||.+..+.|..++|.|||||++|||+.|.+||....+. . .++.+-.+++
T Consensus 199 ----~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~------~-iY~KI~~~~v--------- 258 (355)
T KOG0616|consen 199 ----WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI------Q-IYEKILEGKV--------- 258 (355)
T ss_pred ----EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH------H-HHHHHHhCcc---------
Confidence 4589999999999999999999999999999999999999999876552 1 2222222221
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCC-----CCHHHHHHHhhcc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQR-----PPMSEIVAMLTCK 358 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~R-----Ps~~ev~~~l~~~ 358 (407)
.++......+.+|+...|+.|-.+| +...+|..|-|+.
T Consensus 259 --~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~ 301 (355)
T KOG0616|consen 259 --KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFK 301 (355)
T ss_pred --cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccc
Confidence 1334445668899999999999998 4456777777754
No 32
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-43 Score=329.40 Aligned_cols=262 Identities=26% Similarity=0.439 Sum_probs=202.4
Q ss_pred cCCCCCCeeeccCCccEEEEEecC-----------------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD-----------------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 144 (407)
++|++.+.||+|+||.||++.+.+ +..||+|.+..........+|.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568888999999999999997532 346999998765555566789999999999999999999
Q ss_pred eeeeecCCeeEEEEEeccCCChhHHHhccC-----------------CCCCCHHHHHHHHHHHHHHhccccccCCCceee
Q 040557 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGES-----------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207 (407)
Q Consensus 145 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H 207 (407)
++++.+.+..++||||+++|+|.+++.... ...+++..+.+++.|++.||.|||+.+ ++|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 999999999999999999999999885321 134788899999999999999999998 999
Q ss_pred eccccccEEEcCCCceEEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHhc--CCC
Q 040557 208 RDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISC--RKN 284 (407)
Q Consensus 208 ~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg--~~p 284 (407)
|||||+|||+++++.+||+|||+++........ ......++..|+|||.+.++.++.++||||||+++|||+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999866443322 12234567889999999988999999999999999999975 445
Q ss_pred CCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 285 TDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+....... ............... .. . ..+..++..+.+++.+||+.||++|||+.+|.+.|+
T Consensus 242 ~~~~~~~~---~~~~~~~~~~~~~~~-~~---~---~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDEQ---VIENAGEFFRDQGRQ-VY---L---FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHHH---HHHHHHHHhhhcccc-cc---c---cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 54322111 111111111111000 00 0 011123456899999999999999999999999875
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.1e-44 Score=334.30 Aligned_cols=247 Identities=24% Similarity=0.266 Sum_probs=201.0
Q ss_pred CeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 88 NLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
+.||+|+||.||+++. .+|+.||+|++.... .......+.+|++++..++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986432 2234456789999999999999999999999999999999999999
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccc
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 244 (407)
+|..++.. ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++....... ....
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~ 154 (323)
T cd05571 81 ELFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKT 154 (323)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC-cccc
Confidence 99988853 346899999999999999999999998 99999999999999999999999999975432221 1234
Q ss_pred cccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCH
Q 040557 245 FAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVE 324 (407)
Q Consensus 245 ~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 324 (407)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ........+. . ..+.
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~------~-----~~p~ 216 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------KLFELILMEE------I-----RFPR 216 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-------HHHHHHHcCC------C-----CCCC
Confidence 57999999999999999999999999999999999999998643211 1111111111 0 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 325 RDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 325 ~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
.....+.+++.+||+.||++|| ++.++++|-+..
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~ 255 (323)
T cd05571 217 TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFA 255 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcC
Confidence 2345688999999999999999 899999987754
No 34
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-43 Score=333.22 Aligned_cols=251 Identities=22% Similarity=0.281 Sum_probs=206.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|+.. +|+.||+|.+.... .......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56788899999999999999865 58999999986432 2233457889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+.+|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++.......
T Consensus 98 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred cCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 99999999998854 345889999999999999999999998 9999999999999999999999999998765433
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||....+. ........+...
T Consensus 173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~-------- 233 (329)
T PTZ00263 173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-------RIYEKILAGRLK-------- 233 (329)
T ss_pred ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-------HHHHHHhcCCcC--------
Confidence 2357999999999999999999999999999999999999998643221 111222222110
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhccc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTCKV 359 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~~~ 359 (407)
.+......+.+++.+||+.||++||+ +.+++.|.+...
T Consensus 234 ---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 234 ---FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred ---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 11112345789999999999999997 799999987643
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=328.12 Aligned_cols=259 Identities=21% Similarity=0.263 Sum_probs=209.5
Q ss_pred HhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
..++|++...||+|+||.||+++- .+|..+|+|++++.. ...+.+.++.|-.+|...++++||+++..|.+...+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 457899999999999999999974 469999999997654 23455678899999999999999999999999999999
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
||||++||++..+|. ....|++..+..++.+++.|++.||+.| ++||||||+|+|||..|.+||+||||+.-+..
T Consensus 219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhh
Confidence 999999999999984 4456999999999999999999999999 99999999999999999999999999953210
Q ss_pred -----------------------CCc-----c------------------cccccccCccccCccccccCCCCccccEEe
Q 040557 237 -----------------------DQA-----Y------------------LSTNFAGTLGYTAPEYAIRGELSEKADIYS 270 (407)
Q Consensus 237 -----------------------~~~-----~------------------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s 270 (407)
+.. . .....+|||-|||||++.++.|+...|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 000 0 001246999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC---
Q 040557 271 FGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP--- 347 (407)
Q Consensus 271 ~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs--- 347 (407)
+|||+||||.|-+||....+.+. ++.+...+.. +... .......+..+||.+|+. ||++|..
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T-------~rkI~nwr~~------l~fP-~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQET-------YRKIVNWRET------LKFP-EEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHH-------HHHHHHHhhh------ccCC-CcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 99999999999999987766431 1111111100 0000 011123568899999999 9999985
Q ss_pred HHHHHHHhhcc
Q 040557 348 MSEIVAMLTCK 358 (407)
Q Consensus 348 ~~ev~~~l~~~ 358 (407)
+.||-+|.++.
T Consensus 439 ~~EIK~HPfF~ 449 (550)
T KOG0605|consen 439 AEEIKKHPFFK 449 (550)
T ss_pred HHHHhcCCccc
Confidence 88999988765
No 36
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2e-43 Score=324.97 Aligned_cols=245 Identities=18% Similarity=0.252 Sum_probs=198.2
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccCh--hhHHHHHHHHHHHHcCCCCceeeeeeeeec----CCeeEEEEEec
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ--QGESEFLSEVRMITSIQHKNLVRLLGCCSD----GSQRLLVYEYM 161 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 161 (407)
..||+|++|.||+|.+ +|+.||||.+...... ...+.|.+|+.+|.+++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999998 6899999998654321 224678899999999999999999999876 34678999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhcccccc-CCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED-SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
++|+|.+++.. .+.+++....+++.+++.|+.|||+. + ++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 105 TRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 99999999964 34689999999999999999999984 5 8899999999999999999999999998654332
Q ss_pred cccccccCccccCcccccc--CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 241 LSTNFAGTLGYTAPEYAIR--GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .........+.. ..
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~------~~~~~i~~~~~~-----~~-- 242 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK------EIYDLIINKNNS-----LK-- 242 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcCCC-----CC--
Confidence 23468899999999876 68999999999999999999999999753221 111111111110 01
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 243 ---~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 243 ---LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred ---CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 1112455788999999999999999999999998753
No 37
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-43 Score=332.86 Aligned_cols=257 Identities=23% Similarity=0.278 Sum_probs=204.3
Q ss_pred CCCCCCeeeccCCccEEEEEe----cCCcEEEEEEecccc---ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCee
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL----ADGTLVAVKKLCVDK---SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 154 (407)
+|++.+.||+|+||.||+++. .+|+.||+|.+.... .......+.+|+.++..+ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477789999999999999875 358899999986432 223345678899999999 599999999999999999
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.+
T Consensus 81 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 999999999999998854 345899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCcccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 235 PEDQAYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
............||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ .......... .
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---~~~~~~~~~~------~ 226 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT---QSEVSRRILK------C 226 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC---HHHHHHHHhc------C
Confidence 54433333456799999999998765 478999999999999999999999964322111 1111111111 1
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
++.+ +......+.+++.+||+.||++|| ++.++++|.|..
T Consensus 227 ~~~~-----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 271 (332)
T cd05614 227 DPPF-----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271 (332)
T ss_pred CCCC-----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcC
Confidence 1111 112345678999999999999999 888999998754
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.3e-44 Score=340.58 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=204.7
Q ss_pred cCCCCCCeeeccCCccEEEEEe------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 154 (407)
++|++++.||+|+||.||+|.. .++..||||++...........+.+|+.++..+ +||||++++++|..++..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 5788899999999999999963 246689999986554445556788999999999 899999999999999999
Q ss_pred EEEEEeccCCChhHHHhccC------------------------------------------------------------
Q 040557 155 LLVYEYMKNRSLDLLIYGES------------------------------------------------------------ 174 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~------------------------------------------------------------ 174 (407)
++||||+++|+|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999998885422
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 175 -------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 175 -------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++..........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 124788999999999999999999988 9999999999999999999999999998765433221
Q ss_pred -ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 242 -STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 242 -~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||...... ....+.+..+....
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~~~~~~-------- 337 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD------SKFYKMIKEGYRML-------- 337 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch------HHHHHHHHhCccCC--------
Confidence 122345678999999999999999999999999999998 77777543211 11122222221100
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.+...+.++.+++.+||+.||++|||+.+|+++|+.
T Consensus 338 --~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 338 --SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred --CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 111124568899999999999999999999999974
No 39
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2e-43 Score=325.91 Aligned_cols=270 Identities=21% Similarity=0.316 Sum_probs=205.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|++.+.||+|+||.||+|+.. +++.||+|++..... ......+.+|+++++.++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46888899999999999999875 588999999865432 2334577899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|++++.+..+.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 999987766543 2345899999999999999999999988 99999999999999999999999999987654333
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCc--------hhHHHHHHH-HhCccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQY--------LPEYAWKLY-ERGRIL 310 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~--------~~~~~~~~~-~~~~~~ 310 (407)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||......+... ++....... ......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 22334578999999999999899999999999999999999999986543211000 000000000 000000
Q ss_pred cccCcccccC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 311 ELVDPRMRKE-----GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 311 ~~~d~~~~~~-----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
....+..... ......+..+.+++.+||+.||++|||++++++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~ 286 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPA 286 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 0000000000 001113456899999999999999999999998864
No 40
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.9e-44 Score=330.04 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=206.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999865 68999999985432 2234556889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++.. ...+++.....++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 81 EYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 99999999999854 345899999999999999999999998 9999999999999999999999999998664332
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... . .......+..
T Consensus 156 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~------~-~~~~i~~~~~--------- 215 (291)
T cd05612 156 ----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF------G-IYEKILAGKL--------- 215 (291)
T ss_pred ----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------H-HHHHHHhCCc---------
Confidence 2356899999999999989999999999999999999999998754321 1 1111221211
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhcc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTCK 358 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~~ 358 (407)
..+......+.+++.+||+.||.+||+ +.++++|.|..
T Consensus 216 --~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 216 --EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred --CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 011122456889999999999999995 99999998864
No 41
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.4e-43 Score=321.77 Aligned_cols=255 Identities=26% Similarity=0.384 Sum_probs=205.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec----CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
++|++.+.||+|+||.||+|.+. .+..||+|.+...........+.+|+..+.+++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56888899999999999999753 36689999987655555566789999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||.+......
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 99999999999986433 45899999999999999999999988 999999999999999999999999988754333
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
.........++..|+|||.+.+..++.++|||||||++||+++ |+.||...... . .......+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~------~-~~~~~~~~~~~------ 227 (266)
T cd05064 161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ------D-VIKAVEDGFRL------ 227 (266)
T ss_pred chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------H-HHHHHHCCCCC------
Confidence 2222223345678999999999999999999999999999775 99888643221 1 11112221110
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++..||+.+|++||++++|++.|..
T Consensus 228 ----~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 228 ----PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 1122345668899999999999999999999998854
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-43 Score=334.30 Aligned_cols=268 Identities=22% Similarity=0.305 Sum_probs=208.8
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|++.+.||+|+||.||+++.. +|..+|+|.+...........+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367888899999999999999865 6889999998755444556789999999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ +++||||||+|||+++++.++|+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 158 (331)
T cd06649 84 HMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (331)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc-
Confidence 99999999998543 45899999999999999999999853 39999999999999999999999999998654322
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC--c---------
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG--R--------- 308 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~--------- 308 (407)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||......+.. .........+ .
T Consensus 159 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 159 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE---AIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred --cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHhcccccccccCCccccCccc
Confidence 23456899999999999999999999999999999999999998643321110 0000000000 0
Q ss_pred -------------------cccccC---cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 309 -------------------ILELVD---PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 309 -------------------~~~~~d---~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+..+ ..............++.+++.+||+.||++|||++++++|.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~ 305 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK 305 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence 000000 00000001112345789999999999999999999999998764
No 43
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=322.87 Aligned_cols=251 Identities=22% Similarity=0.353 Sum_probs=213.9
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.+|++.+.||+|.||.|-+|.. ..|+.||||.++++. +.++.-.+.+|+++|+.|+||||+.++.+|++.+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4677788999999999999974 679999999997765 4455667889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||..+|.|.+++. .++.|++.+...++.||..|+.|+|.++ ++|||||.+|||||+++++||+||||+..+....
T Consensus 133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 9999999999994 4566999999999999999999999998 9999999999999999999999999999887665
Q ss_pred cccccccccCccccCccccccCCC-CccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
. ..+++|++-|.+||++.+.+| .+.+|-|||||+||.|+.|..||++.... ..-+.+..|. .
T Consensus 208 f--LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-------~lvrQIs~Ga--------Y 270 (668)
T KOG0611|consen 208 F--LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-------RLVRQISRGA--------Y 270 (668)
T ss_pred H--HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-------HHHHHhhccc--------c
Confidence 4 357899999999999999988 57899999999999999999999864321 1112222221 1
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+. ...+.+..-||+|||..||++|.|+.+|..|-|-.
T Consensus 271 rE----P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 271 RE----PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred cC----CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 11 12234577899999999999999999999998854
No 44
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.3e-43 Score=338.54 Aligned_cols=259 Identities=27% Similarity=0.446 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeccCCccEEEEEe------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCe
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 153 (407)
.++|++.+.||+|+||.||+|.. .++..||+|++...........+.+|+++++.+ +|+||++++++|.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 35788899999999999999873 234579999997655555566788999999999 89999999999999999
Q ss_pred eEEEEEeccCCChhHHHhccC-----------------------------------------------------------
Q 040557 154 RLLVYEYMKNRSLDLLIYGES----------------------------------------------------------- 174 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 174 (407)
.++||||+++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999998875321
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc-cccc
Q 040557 175 ---------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LSTN 244 (407)
Q Consensus 175 ---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~ 244 (407)
...+++..+.+++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||+++........ ....
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 124788899999999999999999988 999999999999999999999999999865433221 1122
Q ss_pred cccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 245 FAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 245 ~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
..++..|+|||++.+..++.++|||||||++|||++ |+.||....... ........+. ... .+
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~------~~~~~~~~~~-----~~~-----~~ 337 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS------KFYKMVKRGY-----QMS-----RP 337 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH------HHHHHHHccc-----Ccc-----CC
Confidence 345678999999999999999999999999999997 999986432211 1112222111 000 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
...+.++.+++.+||+.||++|||+.+|++.|+..
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11245688999999999999999999999999753
No 45
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.5e-42 Score=366.38 Aligned_cols=264 Identities=25% Similarity=0.478 Sum_probs=212.3
Q ss_pred HhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
....+...+.||+|+||.||+|.. .+|..||||++...... ...|++.+++++||||++++|+|.+....++||
T Consensus 688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 345677788999999999999986 57899999988533221 134688899999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.++++ .++|..+.+++.|++.||+|||....++++||||||+||+++.++.+++. ||........
T Consensus 763 Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~- 835 (968)
T PLN00113 763 EYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD- 835 (968)
T ss_pred eCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-
Confidence 9999999999984 28999999999999999999996655569999999999999999888875 6665443222
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
....+++.|+|||++.+..++.++|||||||++|||+||+.|++..... ......|.............+|+.+.
T Consensus 836 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (968)
T PLN00113 836 ----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYCYSDCHLDMWIDPSIR 910 (968)
T ss_pred ----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhcCccchhheeCcccc
Confidence 2236789999999999999999999999999999999999998654332 22344555444444455556676664
Q ss_pred cC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 319 KE-GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 319 ~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
.. ........++.+++.+||+.||++||||.||++.|+....
T Consensus 911 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 911 GDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 32 2344566788999999999999999999999999986543
No 46
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.6e-43 Score=332.00 Aligned_cols=258 Identities=22% Similarity=0.269 Sum_probs=207.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888899999999999999865 589999999864421 234457889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 99999999999853 345899999999999999999999998 99999999999999999999999999986544
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ ............. .+...
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~~~~~--~~~~~ 223 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE------TWENLKYWKETLQ--RPVYD 223 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH------HHHHHHhcccccc--CCCCC
Confidence 2234679999999999999999999999999999999999999987543221 1111111000000 01110
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. .....+..+.+++.+||+.+|++||++.++++|.+..
T Consensus 224 ~--~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 224 D--PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred c--cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 0 0012345688999999999999999999999997754
No 47
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.3e-44 Score=330.90 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=215.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChh-hHHHHHHHHHHHHcCCCCceeeeeeeeecCCe-eEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ-RLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 158 (407)
++|...+++|+|+||.++.++.+ +++.+++|.+....... ......+|+.++++++|||||.+.+.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888899999999999999754 68899999997765332 33467899999999999999999999988887 89999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
+|++||++.+.+...++..++++.+.+|+.|++.|+.|||++. |+|||||+.|||++.++.++|+|||+|+.+....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998888788999999999999999999999887 9999999999999999999999999999987765
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
.. ....+||+.||.||.+.+.+|..|+|||||||++|||++-+++|...... ..+.+.....
T Consensus 161 ~~-a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~------~Li~ki~~~~----------- 222 (426)
T KOG0589|consen 161 SL-ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS------ELILKINRGL----------- 222 (426)
T ss_pred hh-hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH------HHHHHHhhcc-----------
Confidence 32 35688999999999999999999999999999999999999998754332 2222222211
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
-...+..+..++..++..|++.+|+.||++.+++.+.
T Consensus 223 ~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 223 YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 1123445677899999999999999999999999763
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-44 Score=298.89 Aligned_cols=252 Identities=25% Similarity=0.339 Sum_probs=214.5
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++++.||+|-||.||.|+. +++-.||+|++.++.- ..-..++.+|+++-+.|+||||+++++++.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 6788999999999999999985 4688999999865542 233467889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||..+|++...+.......+++.....+..|+|.|+.|+|..+ ++||||||+|+|++.++..|++|||-+..-+..
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~- 177 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSN- 177 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecCCC-
Confidence 9999999999998777788999999999999999999999988 999999999999999999999999999865522
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
...+.+||.-|.+||...+..++..+|+|++|++.||++.|.+||+.....+ ...+ +.. .+..
T Consensus 178 --kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e------tYkr-I~k---~~~~----- 240 (281)
T KOG0580|consen 178 --KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE------TYKR-IRK---VDLK----- 240 (281)
T ss_pred --CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH------HHHH-HHH---cccc-----
Confidence 3456899999999999999999999999999999999999999998544211 1111 111 1122
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
++...+..+.++|.+|+..+|.+|.+..|+++|.|-
T Consensus 241 ---~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 241 ---FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred ---CCcccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 223345568899999999999999999999999874
No 49
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-43 Score=320.14 Aligned_cols=267 Identities=26% Similarity=0.384 Sum_probs=202.6
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHc--CCCCceeeeeeeeecCC----eeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITS--IQHKNLVRLLGCCSDGS----QRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~ 155 (407)
......++||+|.||.||+|.+. ++.||||++. .+..+.|.+|-++.+. ++|+||++++++-..+. .++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 33445578999999999999994 6999999994 4455678888887775 48999999999876655 889
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhcccccc------CCCceeeeccccccEEEcCCCceEEeccc
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED------SHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
||+||.+.|+|.+++..+ .++|....+++..+++||+|||+. ..++|+|||||++||||.+|+++.|+|||
T Consensus 285 LVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred EEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999999999544 489999999999999999999985 24679999999999999999999999999
Q ss_pred CccccCCCCcc-cccccccCccccCccccccCC-CC-----ccccEEehhHHHHHHHhcCCCCCCCCCcccCchh-----
Q 040557 230 LARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGE-LS-----EKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP----- 297 (407)
Q Consensus 230 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~-----~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~----- 297 (407)
||..+...... ...+.+||.+|||||++.+.. +. .+.||||+|.|||||++.-.-.+.....+.+...
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 99988644332 233578999999999987642 22 3689999999999999977655422222222110
Q ss_pred -----HHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 298 -----EYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 298 -----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
+..+..+-..+ ..|.+............+++.+..||+.|++.|.|+.=+-+.++....
T Consensus 442 ~hPt~e~mq~~VV~kK----~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKK----QRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred CCCCHHHHHHHHHhhc----cCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 11122221111 123332222223446678999999999999999999999888876543
No 50
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.3e-43 Score=318.01 Aligned_cols=254 Identities=27% Similarity=0.430 Sum_probs=208.3
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|++.+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.+++.++|+||+++++++.+.+..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC--chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 568888999999999999999888889999987532 234567899999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++|+|.+++.......+++..+..++.|++.|++|||+.+ ++||||||+||++++++.++|+|||++..........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 9999999997665667899999999999999999999988 9999999999999999999999999998765443322
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+....++.++||||||+++|+|+| |+.||...... ........+... +
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-------~~~~~~~~~~~~----~----- 224 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-------DVMSALQRGYRM----P----- 224 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-------HHHHHHHcCCCC----C-----
Confidence 233446778999999988899999999999999999998 88888543221 111112211100 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.....+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 225 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 225 -RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred -CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111234568899999999999999999999999863
No 51
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-43 Score=342.16 Aligned_cols=267 Identities=22% Similarity=0.301 Sum_probs=215.1
Q ss_pred hcCCCCCCeeeccCCccEEEEEecCC-cEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeee-ee---c---C
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLADG-TLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGC-CS---D---G 151 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~---~---~ 151 (407)
..++++.+.|.+|||+.||.|....+ ..||+|++... +......+.+|+++|++|. |+|||.+++. .. . .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 35667778999999999999997665 99999999755 7778889999999999996 9999999993 21 1 2
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
-+++|.||||.||.|-+++..+....|++.++++|+.++++|+.+||... ++|||||||-+||||+.++..||||||.+
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccc
Confidence 36789999999999999997666666999999999999999999999984 78999999999999999999999999999
Q ss_pred cccCCCC--cc------cccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHH
Q 040557 232 RFFPEDQ--AY------LSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300 (407)
Q Consensus 232 ~~~~~~~--~~------~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~ 300 (407)
...-... .. ..-...-|+.|+|||++. +...++|+|||+|||+||-|+....||+..-.
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 7432211 10 001234689999999874 67889999999999999999999999975411
Q ss_pred HHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCCCCCCchh
Q 040557 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIPVRPAY 369 (407)
Q Consensus 301 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~~~~~p~~ 369 (407)
..+++....-. ........+.+||..||+.||++||++-+|+..+..+.....|..-.+
T Consensus 264 ---------laIlng~Y~~P-~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 264 ---------LAILNGNYSFP-PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred ---------eeEEeccccCC-CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 12222222222 123567789999999999999999999999999987777665544444
No 52
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.9e-43 Score=328.54 Aligned_cols=247 Identities=24% Similarity=0.279 Sum_probs=199.9
Q ss_pred CeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 88 NLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
+.||+|+||.||+++. .+|..||+|.+.... .......+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986432 2234456788999999999999999999999999999999999999
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccc
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 244 (407)
+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++........ ....
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~ 154 (323)
T cd05595 81 ELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKT 154 (323)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-cccc
Confidence 99888753 345899999999999999999999998 99999999999999999999999999875432221 1234
Q ss_pred cccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCH
Q 040557 245 FAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVE 324 (407)
Q Consensus 245 ~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 324 (407)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||...... . ......... .. .+.
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~------~-~~~~~~~~~------~~-----~p~ 216 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------R-LFELILMEE------IR-----FPR 216 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH------H-HHHHHhcCC------CC-----CCC
Confidence 57999999999999999999999999999999999999998643221 1 111111111 00 112
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 325 RDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 325 ~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
..+..+.+++.+||+.||++|| ++.++++|-+..
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~ 255 (323)
T cd05595 217 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcC
Confidence 2345688999999999999998 899999987654
No 53
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.5e-44 Score=323.05 Aligned_cols=249 Identities=33% Similarity=0.517 Sum_probs=196.7
Q ss_pred CCeeeccCCccEEEEEec-----CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 87 GNLLGRGGFGPVYRGKLA-----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
.+.||.|.||.||+|.+. .+..|+||.+...........|.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 367999999999999875 367899999965555566789999999999999999999999999888899999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc-c
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA-Y 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~ 240 (407)
++|+|.+++.......+++..+..|+.|++.||.|||+.+ ++|+||+++||++++++.+||+|||++........ .
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 9999999998775667999999999999999999999988 99999999999999999999999999987733222 2
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
..........|+|||.+....++.++||||||+++|||++ |+.|+..... ...... +..+....
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~------~~~~~~-~~~~~~~~-------- 225 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN------EEIIEK-LKQGQRLP-------- 225 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH------HHHHHH-HHTTEETT--------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc------cccccc-ccccccce--------
Confidence 2233457789999999999999999999999999999999 6677643211 112222 22222211
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.+..++..+.+++.+||..+|++|||+.++++.|
T Consensus 226 --~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 --IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1222345688999999999999999999999876
No 54
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-42 Score=315.02 Aligned_cols=251 Identities=25% Similarity=0.416 Sum_probs=203.0
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|++.+.||+|+||.||+|...++..+|+|.+... ......+.+|++++++++||||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG--AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC--CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 457777899999999999999888889999987533 223457889999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.........
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 82 ENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 9999999986443 35899999999999999999999988 9999999999999999999999999998664433322
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... ...+.. ..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~------~~~~~-i~~~~~--~~------- 221 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY------EVVEM-ISRGFR--LY------- 221 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH------HHHHH-HHCCCC--CC-------
Confidence 223345678999999988889999999999999999999 88888643221 11111 111111 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 222 -~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 222 -RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1111234688999999999999999999999886
No 55
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.4e-42 Score=319.54 Aligned_cols=256 Identities=28% Similarity=0.449 Sum_probs=207.9
Q ss_pred cCCCCCCeeeccCCccEEEEEecC------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
++|++.+.||+|+||.||+|.... ...||+|.+...........|.+|++++..++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 457778899999999999997532 25799999875555555677899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccCC--------------CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC
Q 040557 156 LVYEYMKNRSLDLLIYGESD--------------KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF 221 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~ 221 (407)
++|||+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999864321 45889999999999999999999998 99999999999999999
Q ss_pred ceEEecccCccccCCCCc-ccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHH
Q 040557 222 QSKIGDFGLARFFPEDQA-YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 222 ~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~ 299 (407)
.++|+|||++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-------~ 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-------E 234 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-------H
Confidence 999999999986543322 12233456888999999998899999999999999999998 98888653322 1
Q ss_pred HHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 300 AWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 300 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
....+..+... ..+...+..+.+++.+||+.||.+||++.+|+++|..
T Consensus 235 ~~~~i~~~~~~----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 VIEMIRSRQLL----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcCCcC----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11222222111 1223345679999999999999999999999999863
No 56
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.4e-43 Score=330.62 Aligned_cols=250 Identities=23% Similarity=0.258 Sum_probs=205.0
Q ss_pred cCCCCCCeeeccCCccEEEEEecC--CcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD--GTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
++|++.+.||+|+||.||+|...+ +..||+|.+.... .......+.+|++++..++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 568888999999999999997543 3689999985432 223445788999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 110 ~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 9999999999998543 45899999999999999999999998 999999999999999999999999999876432
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||....+. ........+.. .
T Consensus 185 ~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~~i~~~~~------~- 246 (340)
T PTZ00426 185 T----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-------LIYQKILEGII------Y- 246 (340)
T ss_pred c----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-------HHHHHHhcCCC------C-
Confidence 2 2457999999999999988999999999999999999999999753321 11111221111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
.+......+.+++.+||+.||++|+ +++++++|.|..
T Consensus 247 ----~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~ 288 (340)
T PTZ00426 247 ----FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFG 288 (340)
T ss_pred ----CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcC
Confidence 1111234578999999999999995 899999998764
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.1e-43 Score=326.38 Aligned_cols=267 Identities=22% Similarity=0.298 Sum_probs=202.5
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|++.+.||+|+||.||+|+.. +|+.||+|.+...........+.+|+++++.++|+||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367888999999999999999865 6899999998654443444567899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+. ++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++........
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 158 (303)
T cd07869 84 YVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH 158 (303)
T ss_pred CCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence 996 5777776533 345889999999999999999999998 99999999999999999999999999975533221
Q ss_pred ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-Cccc-------
Q 040557 240 YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-GRIL------- 310 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~------- 310 (407)
......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... .......... +...
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 159 -TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI-----QDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred -cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH-----HHHHHHHHHHhCCCChhhccch
Confidence 1234568999999998865 45789999999999999999999999753221 1111111000 0000
Q ss_pred ---cccCc-ccc--cCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 311 ---ELVDP-RMR--KEGI------VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 311 ---~~~d~-~~~--~~~~------~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
...++ ... .... .......+.+++.+||+.||++|||+.|+++|-++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~ 292 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS 292 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence 00000 000 0000 000124577999999999999999999999998864
No 58
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.2e-43 Score=324.66 Aligned_cols=266 Identities=23% Similarity=0.346 Sum_probs=202.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|+..+.||.|+||.||+|... ++..||+|.+...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888899999999999999864 68999999986544334445678999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+.+ +|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~- 158 (288)
T cd07871 85 LDS-DLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK- 158 (288)
T ss_pred CCc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-
Confidence 975 888887543 335789999999999999999999998 99999999999999999999999999976543222
Q ss_pred cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHH--------HHh----C
Q 040557 241 LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKL--------YER----G 307 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~--------~~~----~ 307 (407)
......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.. ...... +.. .
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEEL---HLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCChHHhhccccch
Confidence 1233568999999998865 56899999999999999999999998654322110 000000 000 0
Q ss_pred ccccccCcccccCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 308 RILELVDPRMRKEG---IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 308 ~~~~~~d~~~~~~~---~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.......+...... .......++.+++.+||+.||.+|||++|+++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~ 287 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCC
Confidence 00000111110000 00112346789999999999999999999998865
No 59
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-43 Score=329.88 Aligned_cols=256 Identities=26% Similarity=0.409 Sum_probs=216.3
Q ss_pred CCCCCCeeeccCCccEEEEEecC---Cc--EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLAD---GT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~---~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
..+..+.||.|.||.||+|.+.+ |+ .||||..+.+...+..+.|++|..+|+.++||||++++|+|.+ ...|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEE
Confidence 34556789999999999997532 33 5899998877777778899999999999999999999999975 467999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
||.++-|.|..++..++. .++......++.||+.||.|||+.. ++||||..+|||+....-|||+||||++.+.++
T Consensus 469 mEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred EecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 999999999999976654 4899999999999999999999998 999999999999999999999999999999998
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
..+..+...-+..|||||.+.-..+|.+||||.|||++||+++ |..||.+-...+ ....+..
T Consensus 545 ~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------VI~~iEn- 607 (974)
T KOG4257|consen 545 AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------VIGHIEN- 607 (974)
T ss_pred chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------eEEEecC-
Confidence 8887776667889999999999999999999999999999876 788886432211 1111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
-.+-..++.++..++.|+.+||..+|.+||++.++...|..+..
T Consensus 608 GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 608 GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11123566788899999999999999999999999999886554
No 60
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.4e-42 Score=329.55 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=199.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|+..+.||+|+||.||+|... +|+.||||.+...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 44566788999999999999864 68999999986554455567789999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++|+|... ....+..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++..+.....
T Consensus 154 ~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 223 (353)
T PLN00034 154 MDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD- 223 (353)
T ss_pred CCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc-
Confidence 999998643 23567788899999999999999998 99999999999999999999999999987643322
Q ss_pred cccccccCccccCcccccc-----CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 241 LSTNFAGTLGYTAPEYAIR-----GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
......||..|+|||.+.. ...+.++|||||||++|||++|+.||......+. ....... ....
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~~~~~-~~~~------- 292 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW---ASLMCAI-CMSQ------- 292 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH---HHHHHHH-hccC-------
Confidence 1234578999999998743 2345689999999999999999999973322211 0111100 0000
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
...........+.+++.+||+.||++|||+.|+++|-+...
T Consensus 293 ---~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 293 ---PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred ---CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence 00111223456899999999999999999999999977543
No 61
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2e-42 Score=331.81 Aligned_cols=257 Identities=21% Similarity=0.283 Sum_probs=200.1
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.|+..+.||+|+||+||+|+. .+++.||+|++.... .......+.+|++++..++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577788999999999999975 468899999986433 23345678899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 9999999999854 345889999999999999999999998 99999999999999999999999999864321000
Q ss_pred ----------------------------------------------ccccccccCccccCccccccCCCCccccEEehhH
Q 040557 240 ----------------------------------------------YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGV 273 (407)
Q Consensus 240 ----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~ 273 (407)
......+||+.|+|||.+.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0012357999999999999989999999999999
Q ss_pred HHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHH--ccCCCCCCCCCHHHH
Q 040557 274 LVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI--CLQPHGNQRPPMSEI 351 (407)
Q Consensus 274 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~--cl~~~p~~RPs~~ev 351 (407)
++|||++|+.||....+.. ............ .... ......++.+++.+ |+..++..||++.++
T Consensus 237 il~elltG~~Pf~~~~~~~------~~~~i~~~~~~~-----~~~~---~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTE------TQLKVINWENTL-----HIPP---QVKLSPEAVDLITKLCCSAEERLGRNGADDI 302 (381)
T ss_pred HHHHHHhCCCCCcCCCHHH------HHHHHHcccccc-----CCCC---CCCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 9999999999997543321 111111100000 0000 01123456677776 556677779999999
Q ss_pred HHHhhcc
Q 040557 352 VAMLTCK 358 (407)
Q Consensus 352 ~~~l~~~ 358 (407)
++|-++.
T Consensus 303 l~hp~f~ 309 (381)
T cd05626 303 KAHPFFS 309 (381)
T ss_pred hcCcccC
Confidence 9998764
No 62
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-42 Score=333.25 Aligned_cols=260 Identities=26% Similarity=0.394 Sum_probs=207.1
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGS 152 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 152 (407)
..++|++++.||+|+||.||+|... .+..||||++.........+.+.+|+++++++. ||||+++++++.+..
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3478889999999999999999752 234799999975555555678999999999995 999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccC----------------------------------------------------------
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES---------------------------------------------------------- 174 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 174 (407)
..++||||+++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999998875421
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc
Q 040557 175 ------------------------------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218 (407)
Q Consensus 175 ------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~ 218 (407)
...+++..+..++.|++.||.|||+.+ ++||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence 124788889999999999999999988 99999999999999
Q ss_pred CCCceEEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCch
Q 040557 219 EKFQSKIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYL 296 (407)
Q Consensus 219 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~ 296 (407)
+++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..|+.......
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~---- 347 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS---- 347 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH----
Confidence 9999999999999866443322 1223456788999999999999999999999999999997 888876432211
Q ss_pred hHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 297 PEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 297 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
........+. .. ..+...+..+.+++.+||+.||++||++.+|.++|...
T Consensus 348 --~~~~~~~~~~-------~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 348 --TFYNKIKSGY-------RM---AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred --HHHHHHhcCC-------CC---CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 1111111111 00 01123456788999999999999999999999999754
No 63
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9e-43 Score=327.37 Aligned_cols=247 Identities=25% Similarity=0.272 Sum_probs=200.4
Q ss_pred CeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 88 NLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
+.||+|+||.||++.. .+|+.||+|++.... .......+.+|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986432 2334567889999999999999999999999999999999999999
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccc
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 244 (407)
+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++....... ....
T Consensus 81 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~-~~~~ 154 (328)
T cd05593 81 ELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA-TMKT 154 (328)
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCccc-cccc
Confidence 99888753 345899999999999999999999998 99999999999999999999999999975432221 1234
Q ss_pred cccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCH
Q 040557 245 FAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVE 324 (407)
Q Consensus 245 ~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 324 (407)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .... ....+. .. .+.
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~------~~~~-~~~~~~------~~-----~p~ 216 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFE-LILMED------IK-----FPR 216 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH------HHHH-HhccCC------cc-----CCC
Confidence 57999999999999999999999999999999999999998643221 1111 111110 01 112
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 325 RDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 325 ~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
.....+.+++.+||+.||++|| ++.++++|.|..
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~ 255 (328)
T cd05593 217 TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFT 255 (328)
T ss_pred CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcC
Confidence 2345688999999999999997 899999997753
No 64
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-42 Score=326.39 Aligned_cols=250 Identities=26% Similarity=0.329 Sum_probs=198.7
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHH---HcCCCCceeeeeeeeecCCeeEEE
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMI---TSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
|++.+.||+|+||.||+|... +|+.||||.+.... .......+.+|.+++ ..++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999854 68999999986432 222344566676655 566899999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++|+|..++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999888743 35899999999999999999999998 999999999999999999999999998754322
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. ......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ...... ..+.. .
T Consensus 155 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~------~~~~~i-~~~~~------~- 219 (324)
T cd05589 155 GD-RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE------EVFDSI-VNDEV------R- 219 (324)
T ss_pred CC-cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH------HHHHHH-HhCCC------C-
Confidence 21 223467999999999999999999999999999999999999998643221 111111 11110 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
.+...+..+.+++.+||+.||++|| ++.+++++.+..
T Consensus 220 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~ 261 (324)
T cd05589 220 ----YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFR 261 (324)
T ss_pred ----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcC
Confidence 1122345678999999999999999 688998887653
No 65
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.3e-42 Score=324.04 Aligned_cols=247 Identities=22% Similarity=0.367 Sum_probs=199.3
Q ss_pred CeeeccCCccEEEEEe----cCCcEEEEEEecccc---ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 88 NLLGRGGFGPVYRGKL----ADGTLVAVKKLCVDK---SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+.||+|+||.||+++. .+++.||+|.+.... .......+.+|+++|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 357899999986432 223345678899999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++|+|.+++.. ...+.+..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (323)
T cd05584 82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT- 155 (323)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-
Confidence 999999998853 345788888999999999999999998 99999999999999999999999999975433222
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ..+..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~------~~~~~~-~~~~~----------- 217 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK------KTIDKI-LKGKL----------- 217 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH------HHHHHH-HcCCC-----------
Confidence 123457999999999999988999999999999999999999998653221 111111 11111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
..+......+.+++.+||+.||++|| ++.+++++.+..
T Consensus 218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~ 260 (323)
T cd05584 218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260 (323)
T ss_pred CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcC
Confidence 01112345688999999999999999 899999987653
No 66
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.7e-43 Score=327.77 Aligned_cols=258 Identities=23% Similarity=0.258 Sum_probs=206.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||++... +|+.||+|.+..... ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888899999999999999854 689999999865432 234566889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..+....
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999998644 245899999999999999999999998 9999999999999999999999999998776544
Q ss_pred cccccccccCccccCccccc------cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAI------RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~------~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~~ 230 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA------KTYNNIMNFQRFLKF 230 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH------HHHHHHHcCCCccCC
Confidence 33333457899999999886 456789999999999999999999998654321 111222211111100
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. .....+..+.+++..|++ +|.+|||+.+++.|-+..
T Consensus 231 -----~---~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~ 267 (330)
T cd05601 231 -----P---EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFS 267 (330)
T ss_pred -----C---CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcC
Confidence 0 001134567889999998 999999999999987754
No 67
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.5e-42 Score=323.76 Aligned_cols=245 Identities=20% Similarity=0.251 Sum_probs=199.1
Q ss_pred eeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
||+|+||.||+|+.. +++.||+|.+.... .......+.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999865 58899999986432 233456788999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||+++....... ......
T Consensus 81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~ 154 (312)
T cd05585 81 FHHLQR--EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD-KTNTFC 154 (312)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-cccccc
Confidence 998854 345899999999999999999999998 99999999999999999999999999986433222 223467
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......... +. . ..+...
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~~~~~~~~-~~--------~---~~~~~~ 216 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NEMYRKILQ-EP--------L---RFPDGF 216 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HHHHHHHHc-CC--------C---CCCCcC
Confidence 99999999999999999999999999999999999999864321 111111111 11 0 112223
Q ss_pred HHHHHHHHHHccCCCCCCCC---CHHHHHHHhhcc
Q 040557 327 ALQVINVAFICLQPHGNQRP---PMSEIVAMLTCK 358 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RP---s~~ev~~~l~~~ 358 (407)
...+.+++.+||+.||++|| ++.+++.|.+..
T Consensus 217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~ 251 (312)
T cd05585 217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFS 251 (312)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcC
Confidence 45688999999999999997 578888887654
No 68
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.4e-42 Score=329.34 Aligned_cols=257 Identities=23% Similarity=0.272 Sum_probs=207.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... .......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888899999999999999865 68999999986432 1234567889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999998644 56899999999999999999999988 9999999999999999999999999998765433
Q ss_pred ----------------------------cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCC
Q 040557 239 ----------------------------AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLP 290 (407)
Q Consensus 239 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~ 290 (407)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 1122345689999999999999999999999999999999999999975432
Q ss_pred cccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHhhcc
Q 040557 291 SEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP-MSEIVAMLTCK 358 (407)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-~~ev~~~l~~~ 358 (407)
. .......... ...... .....+..+.+++.+|++ ||.+||+ +.++++|.+..
T Consensus 236 ~------~~~~~i~~~~-------~~~~~p-~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~ 289 (350)
T cd05573 236 Q------ETYNKIINWK-------ESLRFP-PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK 289 (350)
T ss_pred H------HHHHHHhccC-------CcccCC-CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence 1 1111111100 000000 000134568899999998 9999999 99999998754
No 69
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.3e-42 Score=318.46 Aligned_cols=257 Identities=25% Similarity=0.334 Sum_probs=207.1
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
+|+..+.||+|+||.||++... +++.||+|.+..... ......+.+|+++++.++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4777889999999999999864 689999999864322 2233567889999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++|+|..++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 999999998886555556899999999999999999999998 99999999999999999999999999987643332
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. ....|+..|+|||.+.+..++.++|||||||++|||++|+.||........ ............
T Consensus 158 ~--~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~----------- 221 (285)
T cd05605 158 I--RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK---REEVERRVKEDQ----------- 221 (285)
T ss_pred c--ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH---HHHHHHHhhhcc-----------
Confidence 1 234689999999999988999999999999999999999999975332110 011111111100
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
.......+..+.+++.+||+.||++|| +++++++|.+..
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCcc
Confidence 011223455688999999999999999 899999987653
No 70
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.8e-42 Score=330.45 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=203.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|+.. +|+.||||++.... .......+.+|++++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888899999999999999864 68999999996432 2233456789999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++..+....
T Consensus 81 E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 99999999999854 345899999999999999999999998 9999999999999999999999999997543211
Q ss_pred cc-------------------------------------cccccccCccccCccccccCCCCccccEEehhHHHHHHHhc
Q 040557 239 AY-------------------------------------LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISC 281 (407)
Q Consensus 239 ~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg 281 (407)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 01124699999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHhhcc
Q 040557 282 RKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP---MSEIVAMLTCK 358 (407)
Q Consensus 282 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~ev~~~l~~~ 358 (407)
..||....+. ............. ..... ......+.+++.+|+. +|.+|++ +.++++|.+..
T Consensus 236 ~~Pf~~~~~~------~~~~~i~~~~~~~-----~~~~~---~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~ 300 (364)
T cd05599 236 YPPFCSDNPQ------ETYRKIINWKETL-----QFPDE---VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFK 300 (364)
T ss_pred CCCCCCCCHH------HHHHHHHcCCCcc-----CCCCC---CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcC
Confidence 9999754321 1111111111000 00000 0123457788898997 9999998 99999998764
No 71
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.9e-43 Score=327.47 Aligned_cols=246 Identities=23% Similarity=0.305 Sum_probs=197.8
Q ss_pred CeeeccCCccEEEEEe----cCCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 88 NLLGRGGFGPVYRGKL----ADGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
+.||+|+||.||+++. .+|+.||+|++..... ......+.+|++++.+++|+||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999864 3588999999864332 2234567789999999999999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........ ..
T Consensus 82 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-~~ 155 (318)
T cd05582 82 GGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KA 155 (318)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-ce
Confidence 9999998853 345899999999999999999999998 99999999999999999999999999986543322 12
Q ss_pred cccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ...... ..... ..
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~------~~~~~i-~~~~~-----------~~ 217 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK------ETMTMI-LKAKL-----------GM 217 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH------HHHHHH-HcCCC-----------CC
Confidence 3457899999999999888999999999999999999999998643221 111111 11110 01
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhc
Q 040557 323 VERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTC 357 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~ 357 (407)
+...+..+.+++.+||+.||++||+ +.+++.+.+.
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~ 257 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFF 257 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCc
Confidence 1223456789999999999999999 6667776654
No 72
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.7e-42 Score=316.06 Aligned_cols=256 Identities=29% Similarity=0.456 Sum_probs=207.0
Q ss_pred cCCCCCCeeeccCCccEEEEEecC----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
++|++.+.||+|+||.||+|.+.. ...||+|.+...........|.+|+.++..++|+||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568888999999999999998642 4579999986555555667889999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++++|.+++.... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999986543 35899999999999999999999988 999999999999999999999999999977522
Q ss_pred C-cccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 238 Q-AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 238 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
. ........++..|+|||.+.+..++.++||||||+++|||++ |..|+...... ........+... +
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~----~ 228 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-------DVIKAVEDGYRL----P 228 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-------HHHHHHHcCCCC----C
Confidence 2 222222345678999999998999999999999999999998 88887532211 111112211100 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.+...+..+.+++.+||+.+|++||++.+|+++|...
T Consensus 229 ------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 ------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1122345688999999999999999999999999753
No 73
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.3e-42 Score=320.85 Aligned_cols=263 Identities=22% Similarity=0.350 Sum_probs=198.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec--CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcC---CCCceeeeeeeee-----c
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA--DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSI---QHKNLVRLLGCCS-----D 150 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~ 150 (407)
++|++.+.||+|+||.||+|+.. +|+.||+|.+...... .....+.+|+.++..+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999862 4688999998654322 2234556777777665 6999999999885 3
Q ss_pred CCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccC
Q 040557 151 GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGL 230 (407)
Q Consensus 151 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 230 (407)
....++||||+. ++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999996 58988887655566899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCc--
Q 040557 231 ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR-- 308 (407)
Q Consensus 231 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 308 (407)
+....... ......||+.|+|||.+.+..++.++|||||||++|||++|++||......+ ..........
T Consensus 157 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~------~~~~i~~~~~~~ 228 (290)
T cd07862 157 ARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD------QLGKILDVIGLP 228 (290)
T ss_pred eEeccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH------HHHHHHHHhCCC
Confidence 98665432 2234568999999999988899999999999999999999999987543211 1111111000
Q ss_pred ----c-------ccccCccccc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 309 ----I-------LELVDPRMRK--EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 309 ----~-------~~~~d~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. ...+.+.... .......+..+.+++.+||+.||++|||+.++++|.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 0 0000000000 0001123456789999999999999999999998754
No 74
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.7e-42 Score=329.61 Aligned_cols=257 Identities=19% Similarity=0.273 Sum_probs=201.0
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||++.. .+|+.||+|++.... .......+.+|++++..++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688889999999999999975 468999999985432 2234467889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.++|+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 99999999999853 345889999999999999999999998 9999999999999999999999999996432110
Q ss_pred cc----------------------------------------------cccccccCccccCccccccCCCCccccEEehh
Q 040557 239 AY----------------------------------------------LSTNFAGTLGYTAPEYAIRGELSEKADIYSFG 272 (407)
Q Consensus 239 ~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G 272 (407)
.. .....+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 00124699999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCC---CCHH
Q 040557 273 VLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQR---PPMS 349 (407)
Q Consensus 273 ~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R---Ps~~ 349 (407)
|++|||++|+.||......+ .............. + . .......+.+++.+|++ +|.+| +++.
T Consensus 236 vil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~--p---~---~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHE------TYRKIINWRETLYF--P---D---DIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHH------HHHHHHccCCccCC--C---C---CCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 99999999999996543211 11111110000000 0 0 01123467889999998 66665 6999
Q ss_pred HHHHHhhcc
Q 040557 350 EIVAMLTCK 358 (407)
Q Consensus 350 ev~~~l~~~ 358 (407)
+++.|.+..
T Consensus 301 ~~l~hp~~~ 309 (377)
T cd05629 301 EIKSHPFFR 309 (377)
T ss_pred HHhcCCCcC
Confidence 999998764
No 75
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=316.48 Aligned_cols=267 Identities=24% Similarity=0.314 Sum_probs=208.8
Q ss_pred cCHHHHHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccCh-------------hhHHHHHHHHHHHHcCC
Q 040557 72 FDFQTLKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQ-------------QGESEFLSEVRMITSIQ 137 (407)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------~~~~~~~~e~~~l~~l~ 137 (407)
++..+-.+..++|++.+.||+|.||.|-+|+. .+++.||||++.+.... ...+.+.+|+.+|++++
T Consensus 87 ~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 87 YDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 34444445568899999999999999999985 46999999999654211 12357899999999999
Q ss_pred CCceeeeeeeeecC--CeeEEEEEeccCCChhHHHhccCCCC-CCHHHHHHHHHHHHHHhccccccCCCceeeecccccc
Q 040557 138 HKNLVRLLGCCSDG--SQRLLVYEYMKNRSLDLLIYGESDKF-LNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASN 214 (407)
Q Consensus 138 h~niv~l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~N 214 (407)
|+|||+|+.+..+. +.+|||+|||..|.+... ...+. +++.++++++.++..||+|||.++ |+||||||+|
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsN 240 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSN 240 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhh
Confidence 99999999999765 578999999998876433 44455 999999999999999999999999 9999999999
Q ss_pred EEEcCCCceEEecccCccccCCCCc----ccccccccCccccCccccccCC----CCccccEEehhHHHHHHHhcCCCCC
Q 040557 215 VLLDEKFQSKIGDFGLARFFPEDQA----YLSTNFAGTLGYTAPEYAIRGE----LSEKADIYSFGVLVLEIISCRKNTD 286 (407)
Q Consensus 215 ill~~~~~~kl~Dfgla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~~~k~Dv~s~G~vl~el~tg~~p~~ 286 (407)
+||+++|.+||+|||.+..+..... ......+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||.
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 9999999999999999987733211 1122368999999999887732 2568899999999999999999996
Q ss_pred CCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 287 LTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
..... + .... ++...+.-... .+....+.+||.++|++||+.|.+..+|..|.|-...
T Consensus 321 ~~~~~------~-l~~K--------Ivn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 321 DDFEL------E-LFDK--------IVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred cchHH------H-HHHH--------HhcCcccCCCc-ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 43221 1 1111 11122221111 1345568899999999999999999999999996554
No 76
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.6e-42 Score=324.88 Aligned_cols=267 Identities=21% Similarity=0.303 Sum_probs=206.8
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|++.+.||+|+||.||++... ++..+|+|.+...........+.+|++++..++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367889999999999999999865 6888999988655444556678999999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++|+|.+++.. ...+++.....++.|++.||.|||+.+ +++||||||+|||+++++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~- 158 (333)
T cd06650 84 HMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (333)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-
Confidence 9999999999854 345899999999999999999999742 29999999999999999999999999997653322
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccc---------
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRIL--------- 310 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 310 (407)
.....|+..|+|||.+.+..++.++|||||||++|||++|+.||.......... ... ....+...
T Consensus 159 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 159 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELEL---MFG-CPVEGDPAESETSPRPR 232 (333)
T ss_pred --cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHH---Hhc-CcccCCccccccCcccC
Confidence 123568999999999998889999999999999999999999986433211000 000 00000000
Q ss_pred --------------------cccCcccc---cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 311 --------------------ELVDPRMR---KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 311 --------------------~~~d~~~~---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
...+.... ..........++.+++.+||+.||++|||+.|+++|.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~ 303 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK 303 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHh
Confidence 00000000 0000001234688999999999999999999999998764
No 77
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.2e-42 Score=323.88 Aligned_cols=254 Identities=23% Similarity=0.318 Sum_probs=201.7
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|+.. +++.||+|.+.... .......+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999864 68899999996532 223345678899999888 799999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++....... ...
T Consensus 81 g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-~~~ 154 (329)
T cd05588 81 GDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD-TTS 154 (329)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCCC-ccc
Confidence 999888743 346999999999999999999999998 99999999999999999999999999975322111 223
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcc--cCchhHHHHHHHHhCccccccCcccccCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSE--MQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||+...... ......+.......+.. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~----- 223 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------R----- 223 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------C-----
Confidence 4679999999999999999999999999999999999999996432211 11112222222222211 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHHhhcc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPP------MSEIVAMLTCK 358 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs------~~ev~~~l~~~ 358 (407)
.+...+..+.+++.+||+.||++||+ +.++++|-|..
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 11123456889999999999999997 78999988764
No 78
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.8e-42 Score=315.05 Aligned_cols=255 Identities=27% Similarity=0.409 Sum_probs=207.1
Q ss_pred hcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.++|++.+.||+|++|.||+|...+++.||+|.+.... .....+.+|++++++++|+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 35688889999999999999998778899999985432 2345788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.......+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.++|+|||++.........
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 99999999997655567899999999999999999999988 999999999999999999999999999877533222
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.......+..|+|||.+.+..++.++||||||+++|||++ |+.|+...... ........+...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~--------- 223 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-------EVLQQVDQGYRM--------- 223 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcCCCC---------
Confidence 1222233457999999998899999999999999999999 88887543211 111122211100
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 -PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0112234668999999999999999999999999864
No 79
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-43 Score=330.97 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=207.3
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 155 (407)
..++|...++||+|+||+|+++..+ +++.+|||.+++.. ..+..+..+.|.+++... +||.+++++.++...+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3468899999999999999999864 68899999998765 345567788999998887 5999999999999999999
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
+||||+.||++..+ .....+++..+..++..++.||.|||+++ ||+||||.+|||||.+|.+||+||||++..-
T Consensus 446 fvmey~~Ggdm~~~---~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHH---IHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEecCCCcEEEE---EecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999994444 34456999999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 236 EDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
.... .+++++|||.|||||++.+..|+..+|.|||||+||||+.|..||.++..++ .......+
T Consensus 520 ~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee------~FdsI~~d--------- 583 (694)
T KOG0694|consen 520 GQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE------VFDSIVND--------- 583 (694)
T ss_pred CCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHhcC---------
Confidence 2222 4567999999999999999999999999999999999999999998654322 11111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPM-----SEIVAM 354 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~-----~ev~~~ 354 (407)
...++...+.+.++|+.++|..+|++|..+ .+|.+|
T Consensus 584 ---~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 584 ---EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred ---CCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 112444566788999999999999999976 455544
No 80
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=310.78 Aligned_cols=273 Identities=23% Similarity=0.352 Sum_probs=210.4
Q ss_pred CHHHHHHHhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC--CCCceeeeeeeeec
Q 040557 73 DFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI--QHKNLVRLLGCCSD 150 (407)
Q Consensus 73 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~ 150 (407)
..--.+...++..+.+.||+|.||.||+|++. |+.||||+|. ..++..+.+|.++.... +|+||+.+++.-..
T Consensus 202 plLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~----srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~ 276 (513)
T KOG2052|consen 202 PLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFS----SRDERSWFRETEIYQTVMLRHENILGFIAADNK 276 (513)
T ss_pred hhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEec----ccchhhhhhHHHHHHHHHhccchhhhhhhcccc
Confidence 33345566678888999999999999999995 8999999994 34455677888888764 99999999987543
Q ss_pred C----CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhcccccc-----CCCceeeeccccccEEEcCCC
Q 040557 151 G----SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED-----SHTRIVHRDIKASNVLLDEKF 221 (407)
Q Consensus 151 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~i~H~dlk~~Nill~~~~ 221 (407)
+ .++|||++|.++|||.+++.. ..++....++++..+|.||++||-. |.|.|.|||||+.|||+..++
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 3 367999999999999999943 4599999999999999999999974 678899999999999999999
Q ss_pred ceEEecccCccccCCCCccc---ccccccCccccCccccccCC----C--CccccEEehhHHHHHHHhc----------C
Q 040557 222 QSKIGDFGLARFFPEDQAYL---STNFAGTLGYTAPEYAIRGE----L--SEKADIYSFGVLVLEIISC----------R 282 (407)
Q Consensus 222 ~~kl~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~----~--~~k~Dv~s~G~vl~el~tg----------~ 282 (407)
.+.|+|+|||.....+.... ....+||.+|||||++...- + -..+||||||.|+||+... +
T Consensus 354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 99999999998876554332 34578999999999887542 1 2468999999999999752 2
Q ss_pred CCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 283 KNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 283 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.||..-.+.+.++ +.+.+--..+.+.|.+.......+....+.++++.||..+|.-|-|+--|.+.|....
T Consensus 434 ~Pyyd~Vp~DPs~------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 434 LPYYDVVPSDPSF------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CCcccCCCCCCCH------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 4554433332221 1111111222233444444455667788999999999999999999999988887654
No 81
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.3e-42 Score=314.79 Aligned_cols=254 Identities=28% Similarity=0.403 Sum_probs=206.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.+|+..+.||+|+||.||+|... +++.||+|.+... ......+.+|++++..++|+||+++++++...+..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 34667789999999999999854 5889999988532 33456788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.........
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 99999999987655566899999999999999999999988 999999999999999999999999999876544332
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
......++..|+|||.+.+..++.++|||||||++|||++ |..|+...... ........+. ..
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~-----~~---- 224 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------QVYELLEKGY-----RM---- 224 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCC-----CC----
Confidence 2222334668999999998999999999999999999998 88887543211 1122222111 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.+|++|||+.+++++|+.
T Consensus 225 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 225 -ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 1112234678999999999999999999999999874
No 82
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-42 Score=330.40 Aligned_cols=264 Identities=21% Similarity=0.284 Sum_probs=200.8
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.+|++.+.||+|+||.||++.. .+++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 5799999999999999999985 468899999642 12467899999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+. ++|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.........
T Consensus 165 ~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 95 6888777433 45899999999999999999999998 999999999999999999999999999754333222
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCch-hHHHHHHHHh-Cc----------
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYL-PEYAWKLYER-GR---------- 308 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~-~~---------- 308 (407)
......||+.|+|||++.+..++.++|||||||++|||++|+.|+........... .......... +.
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 23346799999999999999999999999999999999999988754322111100 0000000000 00
Q ss_pred --cccc---------cCcccccC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 309 --ILEL---------VDPRMRKE-GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 309 --~~~~---------~d~~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.... ..+..+.. ......+.++.+++.+||+.||++|||++|++++-++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 0000 00000000 00112355788999999999999999999999998864
No 83
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.7e-42 Score=321.62 Aligned_cols=253 Identities=24% Similarity=0.326 Sum_probs=199.9
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... +++.||+|.+.... .......+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 58899999986542 233445677899888877 899999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-~~~ 154 (329)
T cd05618 81 GDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TTS 154 (329)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-ccc
Confidence 999888743 345899999999999999999999998 99999999999999999999999999975432221 123
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcc--cCchhHHHHHHHHhCccccccCcccccCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSE--MQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
...||..|+|||++.+..++.++|||||||++|||++|+.||....... ......+.......+.. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~ 223 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-----------R 223 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-----------C
Confidence 4679999999999999999999999999999999999999996422111 11112222222222111 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHHhhc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPP------MSEIVAMLTC 357 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs------~~ev~~~l~~ 357 (407)
.+......+.+++.+||+.||++||+ +.++++|-+.
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f 265 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 265 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCC
Confidence 12223456789999999999999998 6899888765
No 84
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.9e-42 Score=326.16 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=205.1
Q ss_pred hcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeec-CC
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSD-GS 152 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-~~ 152 (407)
.++|++.+.||+|+||.||+|... +++.||+|++...........+.+|+.++.++ +|+||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357888999999999999999632 35789999986544445556788999999999 89999999998864 45
Q ss_pred eeEEEEEeccCCChhHHHhccC----------------------------------------------------------
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES---------------------------------------------------------- 174 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 174 (407)
..+++|||+++|+|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 6789999999999998885422
Q ss_pred -CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc-ccccccCcccc
Q 040557 175 -DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYT 252 (407)
Q Consensus 175 -~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~ 252 (407)
...+++..+.+++.|++.||.|||+.+ |+||||||+|||+++++.++|+|||++..+....... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 125899999999999999999999988 9999999999999999999999999998764333222 22345677899
Q ss_pred CccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHH
Q 040557 253 APEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVI 331 (407)
Q Consensus 253 aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 331 (407)
|||++.+..++.++|||||||++|||++ |..||......+ ........+... ..+......+.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~----------~~~~~~~~~~~ 306 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEGTRM----------RAPEYATPEIY 306 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhccCCC----------CCCccCCHHHH
Confidence 9999999999999999999999999998 988886432211 111222221110 01112345688
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 332 NVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 332 ~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+++.+||+.+|++||++.+++++|....
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999999998643
No 85
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.7e-42 Score=313.75 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=209.8
Q ss_pred HhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
...+|++.+.||.|+||.||+|...++..+|+|.+.... ......+.+|+.+++.++|+||+++++++.+....++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc-hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 345688889999999999999998889999999986433 3345578899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 999999999997666667899999999999999999999988 99999999999999999999999999987654332
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. .....++..|+|||.+.+..++.++||||||+++++|++ |+.|+...... .... ....+.. .
T Consensus 160 ~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~------~~~~-~~~~~~~-----~--- 223 (261)
T cd05148 160 L-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH------EVYD-QITAGYR-----M--- 223 (261)
T ss_pred c-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH------HHHH-HHHhCCc-----C---
Confidence 2 223446778999999988899999999999999999998 78888543311 1111 1111100 0
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 224 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 --PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0112334568899999999999999999999999864
No 86
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.3e-42 Score=311.71 Aligned_cols=252 Identities=26% Similarity=0.422 Sum_probs=202.9
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|++.+.||+|+||.||.|...++..+|+|.+.... .....+.+|+.++.+++||||+++++++...+..+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 3567788999999999999988777789999885332 23457899999999999999999999999988999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
.+|+|.+++..... .+++..+..++.|++.|+.|||+.+ ++|+||||+||++++++.+||+|||+++.........
T Consensus 82 ~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 82 SNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred CCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999999864333 5899999999999999999999998 9999999999999999999999999998665443222
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... .... ....+... .
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~~~~-~~~~~~~~----~----- 221 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS------ETVE-KVSQGLRL----Y----- 221 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------HHHH-HHhcCCCC----C-----
Confidence 223345678999999988889999999999999999999 88887543221 1111 11111110 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 222 -~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 -RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11112456899999999999999999999998873
No 87
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.3e-42 Score=320.80 Aligned_cols=256 Identities=27% Similarity=0.410 Sum_probs=203.8
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCc----EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
.+|+..+.||+|+||.||+|.+. +|. .||+|.+..........++.+|+.+++.++|+||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888899999999999999753 343 48999986554555667899999999999999999999999764 5679
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
++||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++.+..
T Consensus 86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999986543 35889999999999999999999998 99999999999999999999999999987754
Q ss_pred CCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 237 DQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 237 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... ........+...
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~---- 230 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL---- 230 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHhCCCCC----
Confidence 33221 122334678999999999999999999999999999998 89888643221 112222221110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
. .+..+...+.+++.+||+.+|++||++.+++..+....
T Consensus 231 ---~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 231 ---P---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred ---C---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 11123456889999999999999999999999987543
No 88
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.3e-42 Score=324.45 Aligned_cols=271 Identities=21% Similarity=0.288 Sum_probs=199.1
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC-----CeeE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG-----SQRL 155 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 155 (407)
+|++.+.||+|+||.||+|... +|..||||++.... .......+.+|+++++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4777889999999999999854 68999999986432 223345788999999999999999999987543 2479
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
+||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 688888743 345899999999999999999999998 9999999999999999999999999998653
Q ss_pred CCCc--ccccccccCccccCcccccc--CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCc--------hhHHHHHH
Q 040557 236 EDQA--YLSTNFAGTLGYTAPEYAIR--GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQY--------LPEYAWKL 303 (407)
Q Consensus 236 ~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~--------~~~~~~~~ 303 (407)
.... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ........
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 3221 11234578999999998865 678999999999999999999999986533211000 00000000
Q ss_pred HHhCccccccCcccccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 304 YERGRILELVDPRMRKEGI-----VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 304 ~~~~~~~~~~d~~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+......+.++........ .......+.+++.+||+.||++|||++|+++|-+...
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~ 295 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG 295 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence 0000000000000000000 0012345789999999999999999999999987643
No 89
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-42 Score=302.82 Aligned_cols=273 Identities=27% Similarity=0.356 Sum_probs=209.0
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhH-HHHHHHHHHHHcCCCCceeeeeeeeec--CCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNLVRLLGCCSD--GSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 157 (407)
++|+..+.|++|+||.||+|+++ +++.||+|+++.+....+. ..-++|+.+|.+++|||||.+-.+... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45777789999999999999864 6899999999876644332 245799999999999999999887654 3578999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
||||+. +|..+++... +.+...++..+..|+++|++|||.+. |+|||||++|+|++..|.+||+|||||+.+...
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999987 8999987655 56888899999999999999999998 999999999999999999999999999988765
Q ss_pred CcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
.. ..+..+-|..|.|||.+.+ ..|++..|+||+|||+.||+++++.|.+...-+ .+.. +...+. .-.+.+-|.
T Consensus 231 ~k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d--Ql~~-If~llG--tPte~iwpg 304 (419)
T KOG0663|consen 231 LK-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID--QLDK-IFKLLG--TPSEAIWPG 304 (419)
T ss_pred cc-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH--HHHH-HHHHhC--CCccccCCC
Confidence 33 2356788999999999887 579999999999999999999998886543211 1111 111111 111111110
Q ss_pred -------------------cccCCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCCCCCCc
Q 040557 317 -------------------MRKEGIVE-RDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIPVRP 367 (407)
Q Consensus 317 -------------------~~~~~~~~-~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~~~~~p 367 (407)
++.. +.. .....-.+++..+|..||.+|.|++|.++|=++. +.+.|..|
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~k-F~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~-e~P~p~~P 373 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKK-FGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR-ETPLPIDP 373 (419)
T ss_pred ccccchhhccccCCCCchhhhhh-ccccccchhHHHHHHHHhccCccccccHHHhhcccccc-cCCCCCCh
Confidence 1100 111 0235667889999999999999999999998764 33334333
No 90
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-42 Score=325.67 Aligned_cols=247 Identities=25% Similarity=0.279 Sum_probs=199.2
Q ss_pred CeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 88 NLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
+.||+|+||.||++.. .+|+.||+|.+.... .......+.+|++++..++|+||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986432 2234456788999999999999999999999999999999999999
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
+|..++.. ...+++..+..++.|++.||.|||+ .+ ++||||||+|||+++++.+||+|||++........ ...
T Consensus 81 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~ 154 (325)
T cd05594 81 ELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMK 154 (325)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-ccc
Confidence 99888743 3468999999999999999999997 56 99999999999999999999999999875432222 123
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+. .. .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-------~~~~~i~~~~------~~-----~p 216 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------KLFELILMEE------IR-----FP 216 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-------HHHHHHhcCC------CC-----CC
Confidence 456999999999999999999999999999999999999998643221 1111111111 00 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 324 ERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
......+.+++.+||+.||++|+ ++.++++|.+..
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~ 256 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFA 256 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcC
Confidence 12345688999999999999996 999999987754
No 91
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.6e-41 Score=317.01 Aligned_cols=260 Identities=21% Similarity=0.230 Sum_probs=201.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+++.. +++.||+|.+.... .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888899999999999999864 58999999986422 2233456889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||++..+....
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999998542 345899999999999999999999998 9999999999999999999999999997665444
Q ss_pred cccccccccCccccCcccccc-----CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIR-----GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .............. +
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~-~ 229 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKEHFQ-F 229 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCccc-C
Confidence 333334569999999998863 45788999999999999999999998643221 11111111111010 0
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHHhhcc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQP--HGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~--~p~~RPs~~ev~~~l~~~ 358 (407)
.+ .....+..+.+++.+|++. ++..||++.++++|.|..
T Consensus 230 ~~------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~ 270 (331)
T cd05597 230 PP------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFE 270 (331)
T ss_pred CC------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCC
Confidence 00 0111344577788887755 334488999999998864
No 92
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8.9e-42 Score=313.64 Aligned_cols=255 Identities=28% Similarity=0.476 Sum_probs=206.1
Q ss_pred cCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
++|.+.+.||+|+||.||+|... ++..||+|.+...........+.+|++++..++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 45777789999999999999763 347899999875555545678999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccC------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCce
Q 040557 156 LVYEYMKNRSLDLLIYGES------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS 223 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~ 223 (407)
+||||+++++|.+++.... ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999986432 245789999999999999999999998 9999999999999999999
Q ss_pred EEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHH
Q 040557 224 KIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 224 kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~ 301 (407)
+|+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||....... ..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-------~~ 234 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-------VI 234 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HH
Confidence 99999999865332221 1223346788999999999999999999999999999998 998876432211 11
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+.... .+...+..+.+++.+||+.||++||++.||++.|.
T Consensus 235 ~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ECITQGRLLQ----------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHcCCcCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1122221110 11223456889999999999999999999999885
No 93
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.3e-41 Score=317.96 Aligned_cols=246 Identities=25% Similarity=0.314 Sum_probs=194.0
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... +++.||+|.+.... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999864 58899999986432 123334556677777654 899999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++....... ....
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~ 154 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAS 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cccc
Confidence 9999888543 45899999999999999999999988 9999999999999999999999999998653322 2223
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..... +.... + ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~------~~~~~-i~~~~------~-----~~~ 216 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED------ELFDS-ILNDR------P-----HFP 216 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH------HHHHH-HHcCC------C-----CCC
Confidence 467999999999999999999999999999999999999998753221 11111 11110 0 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHH-HHHHHhhc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPMS-EIVAMLTC 357 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~~-ev~~~l~~ 357 (407)
......+.+++.+||+.||++||++. +++++.+.
T Consensus 217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~ 251 (316)
T cd05592 217 RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFF 251 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCccc
Confidence 22345678999999999999999875 66666543
No 94
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-42 Score=304.10 Aligned_cols=275 Identities=24% Similarity=0.318 Sum_probs=206.5
Q ss_pred HhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecc-ccChhhHHHHHHHHHHHHcCCCCceeeeeeeeec-----CC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCV-DKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD-----GS 152 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 152 (407)
....|...+.||+|+||.|+.+.. .+|+.||||++.. -......++-.+|+.+|+.++|+||+.+++.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 345566678899999999999975 4789999999852 2345556788999999999999999999998754 35
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..|+|+|+|+ .+|...++ .++.++......+++|+++||.|+|+.+ ++||||||+|+|++.+..+||+|||+|+
T Consensus 100 DvYiV~elMe-tDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHHh-hHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence 7899999994 48888884 3445899999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCC-CcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------chhHHHHH
Q 040557 233 FFPED-QAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YLPEYAWK 302 (407)
Q Consensus 233 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~~~~~~~ 302 (407)
..... .....+..+.|..|.|||.+.. ..||...||||.||++.||++|++.|.+...-..- ........
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 87543 1222356788999999998764 68999999999999999999999988654321100 00011111
Q ss_pred HHHhCccccccCcccccCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 303 LYERGRILELVDPRMRKEG-----IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 303 ~~~~~~~~~~~d~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
.+........+........ .-.......++|+.+||..||.+|+|++|.++|.-...-
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~ 316 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY 316 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence 1111111111110000000 111234578999999999999999999999999765443
No 95
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.8e-41 Score=311.59 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=205.2
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
+|+..+.||+|+||.||+|.. .++..||+|.+...........+.+|++++.+++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577788999999999999975 4689999999865544555667999999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~--- 149 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI--- 149 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---
Confidence 999987552 3688889999999999999999998 9999999999999999999999999998654332
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||....................... .+.+..
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-- 222 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVLPV-- 222 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCCCC--
Confidence 2345789999999999999999999999999999999999999865433222111111111111110 111111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
......+.+++.+||+.+|++||++++++++.+...
T Consensus 223 --~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 223 --GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred --CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 113346889999999999999999999999987643
No 96
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.8e-42 Score=326.64 Aligned_cols=257 Identities=22% Similarity=0.277 Sum_probs=200.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.+|++.+.||+|+||.||+|+.. +++.||+|.+.... .......+.+|+++|+.++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888899999999999999854 58999999985432 1223456889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||++..+....
T Consensus 81 E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 99999999999854 345889999999999999999999998 9999999999999999999999999985332000
Q ss_pred ------------------------------------------cccccccccCccccCccccccCCCCccccEEehhHHHH
Q 040557 239 ------------------------------------------AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVL 276 (407)
Q Consensus 239 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~ 276 (407)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00012347999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHH
Q 040557 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRP---PMSEIVA 353 (407)
Q Consensus 277 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP---s~~ev~~ 353 (407)
||++|+.||....+.+ ....... ... ....+. .......+.+++.+|+ .+|++|+ ++.++++
T Consensus 236 ell~G~~Pf~~~~~~~------~~~~i~~-~~~-~~~~~~------~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 236 EMLVGQPPFLADTPAE------TQLKVIN-WET-TLHIPS------QAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred ehhhCCCCCCCCCHHH------HHHHHhc-cCc-cccCCC------CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999997544321 1111111 000 000000 0112345667777766 4999999 9999999
Q ss_pred Hhhcc
Q 040557 354 MLTCK 358 (407)
Q Consensus 354 ~l~~~ 358 (407)
|.+..
T Consensus 301 h~~~~ 305 (376)
T cd05598 301 HPFFK 305 (376)
T ss_pred CCCcC
Confidence 98764
No 97
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.7e-42 Score=314.67 Aligned_cols=255 Identities=26% Similarity=0.415 Sum_probs=204.3
Q ss_pred cCCCCCCeeeccCCccEEEEEe-----cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
+.|++.+.||+|+||.||+|.. .++..||+|.+...........+.+|+++++.++|+||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577778999999999999974 24678999998755555555788999999999999999999999999999999
Q ss_pred EEEeccCCChhHHHhccC---------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC
Q 040557 157 VYEYMKNRSLDLLIYGES---------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF 221 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~ 221 (407)
||||+++++|.+++.... ...+++.....++.|++.||.|||+.+ ++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999999885322 234788999999999999999999998 99999999999999999
Q ss_pred ceEEecccCccccCCCCc-ccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHH
Q 040557 222 QSKIGDFGLARFFPEDQA-YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 222 ~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~ 299 (407)
.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||....+ ..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-------~~ 234 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-------QE 234 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-------HH
Confidence 999999999986643322 12233446778999999988889999999999999999998 8888754321 11
Q ss_pred HHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 300 AWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 300 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.......+.... .+...+..+.+++.+||+.||++||++.+|.++|.
T Consensus 235 ~~~~~~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 235 VIEMVRKRQLLP----------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHcCCcCC----------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 112222211110 11223456889999999999999999999999885
No 98
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9.3e-42 Score=313.14 Aligned_cols=257 Identities=27% Similarity=0.425 Sum_probs=204.2
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCe
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 153 (407)
..++|++.+.||+|+||.||+|... ++..||+|.+..........++.+|+.+++.++|+||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567899999999999999998753 3567999988644444455678999999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHHhccC--------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEE
Q 040557 154 RLLVYEYMKNRSLDLLIYGES--------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKI 225 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl 225 (407)
.++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 999999999999999986432 124678899999999999999999988 999999999999999999999
Q ss_pred ecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHH
Q 040557 226 GDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKL 303 (407)
Q Consensus 226 ~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 303 (407)
+|||++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..|+...... .....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-------~~~~~ 233 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-------QVLRF 233 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHH
Confidence 9999998654433221 122345778999999998899999999999999999999 67777543221 11111
Q ss_pred HHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 304 YERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 304 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
...+.... .+...+..+.+++.+||+.+|++|||+.|++++|+
T Consensus 234 ~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 VMEGGLLD----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHcCCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 12221111 11123456889999999999999999999999885
No 99
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.5e-42 Score=326.10 Aligned_cols=258 Identities=20% Similarity=0.210 Sum_probs=205.3
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
.++|++.+.||+|+||.||+++.. +++.||+|.+.... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 467888899999999999999864 68899999985432 223344578899999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++|+|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++......
T Consensus 122 ~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 122 MEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999988542 4788888999999999999999998 999999999999999999999999999876544
Q ss_pred CcccccccccCccccCccccccC----CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRG----ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~----~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
.........||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ........ +...
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~-~~~~--- 265 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMD-HKNS--- 265 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH------HHHHHHHc-CCCc---
Confidence 33333456799999999988653 4789999999999999999999999754321 11111111 1100
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhhcc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQ--RPPMSEIVAMLTCK 358 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~l~~~ 358 (407)
..... ....+..+.+++.+||+.+|++ ||++.++++|.+..
T Consensus 266 -~~~~~---~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~ 308 (370)
T cd05596 266 -LTFPD---DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFK 308 (370)
T ss_pred -CCCCC---cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccC
Confidence 00000 0113456889999999999988 99999999998764
No 100
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.4e-41 Score=319.34 Aligned_cols=254 Identities=23% Similarity=0.304 Sum_probs=201.4
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... +++.||+|++..... ......+.+|..++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999864 578999999965432 23345678899999888 699999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++........ ...
T Consensus 81 ~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~ 154 (327)
T cd05617 81 GDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD-TTS 154 (327)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-cee
Confidence 999888743 345899999999999999999999998 99999999999999999999999999975322211 123
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||........................ ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------~~p 223 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-----------RIP 223 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-----------CCC
Confidence 467999999999999999999999999999999999999999754332222222333332222111 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC------HHHHHHHhhcc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPP------MSEIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs------~~ev~~~l~~~ 358 (407)
...+..+.+++.+||+.||++||+ +.++++|-++.
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~ 264 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR 264 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence 123355789999999999999998 57898887653
No 101
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.3e-42 Score=311.70 Aligned_cols=251 Identities=27% Similarity=0.407 Sum_probs=201.9
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
.+|++.+.||+|+||.||+|...++..+|+|.+.... .....+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 3477788999999999999998777889999885322 23456889999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++++|.+++.... ..+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.+||+|||+++.........
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 82 ANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred CCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 9999999986443 35899999999999999999999998 9999999999999999999999999998665433222
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... . .......+. ...
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~-~~~~~~~~~-----~~~---- 221 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS------E-VVESVSAGY-----RLY---- 221 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH------H-HHHHHHcCC-----cCC----
Confidence 222234567999999999999999999999999999999 78887643221 1 111111110 000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 222 -~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 -RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1112355789999999999999999999999986
No 102
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.5e-41 Score=319.65 Aligned_cols=260 Identities=20% Similarity=0.222 Sum_probs=202.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+++.. +++.||+|.+.... .......+.+|..++..++|+||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999864 58899999985422 2233455788999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|..++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999998643 245899999999999999999999998 9999999999999999999999999998765544
Q ss_pred cccccccccCccccCcccccc-----CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIR-----GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
........||+.|+|||++.+ +.++.++|||||||++|||++|+.||...... ...........
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~------~~~~~i~~~~~----- 225 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHEE----- 225 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH------HHHHHHHcCCC-----
Confidence 333334579999999998875 46789999999999999999999999643221 11111111110
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhhcc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQ--RPPMSEIVAMLTCK 358 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~l~~~ 358 (407)
+..........+..+.+++.+|++.++++ |++++++++|.++.
T Consensus 226 --~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~ 270 (331)
T cd05624 226 --RFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFE 270 (331)
T ss_pred --cccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcC
Confidence 00000011123456788999988866554 57899999987653
No 103
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.6e-41 Score=322.04 Aligned_cols=260 Identities=20% Similarity=0.222 Sum_probs=204.4
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
..++|++.+.||+|+||.||+++.. +++.||+|.+.... .......+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3467899999999999999999865 58899999985422 22334567899999999999999999999999999999
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 99999999999998532 4788999999999999999999998 99999999999999999999999999987654
Q ss_pred CCcccccccccCccccCccccccC----CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIRG----ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
..........||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ..............
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~- 267 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV------GTYSKIMDHKNSLN- 267 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCcccC-
Confidence 433333456799999999988754 3788999999999999999999999754321 11112111111000
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhhccc
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQ--RPPMSEIVAMLTCKV 359 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~l~~~~ 359 (407)
... ....+..+.+++..|++.++.+ ||++.|+++|.|...
T Consensus 268 ----~p~---~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 268 ----FPE---DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred ----CCC---cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 000 0112445778888899865544 899999999988654
No 104
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.6e-41 Score=309.76 Aligned_cols=259 Identities=23% Similarity=0.375 Sum_probs=208.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|+.. +++.||+|.+.... .......+.+|+++++.++||||+++++++.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999854 68999999875422 3344567889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 159 EYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 159 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
||+++|+|..++... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999887532 2345889999999999999999999988 99999999999999999999999999987654
Q ss_pred CCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
.... .....+++.|+|||.+.+..++.++|+||||+++|||++|+.|+....... .... ....... .+.
T Consensus 159 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~----~~~~-~~~~~~~-----~~~ 227 (267)
T cd08228 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----FSLC-QKIEQCD-----YPP 227 (267)
T ss_pred hhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH----HHHH-HHHhcCC-----CCC
Confidence 3321 223568889999999988889999999999999999999999985432211 1111 1111111 011
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
......+..+.+++.+||+.+|++||++.+|++.+...
T Consensus 228 ----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 ----LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ----CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11223456789999999999999999999999998754
No 105
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=8.9e-42 Score=314.28 Aligned_cols=266 Identities=28% Similarity=0.410 Sum_probs=202.1
Q ss_pred CCCCeeeccCCccEEEEEe-----cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeEEE
Q 040557 85 HPGNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRLLV 157 (407)
Q Consensus 85 ~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 157 (407)
+..+.||+|+||.||.+.. .++..||+|.+...........+.+|+++++.++|+||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7788999999999988642 357899999986554444567788999999999999999999988653 457899
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++|+|.+++... .+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.++|+|||++......
T Consensus 87 ~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 87 MEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred ecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 9999999999998543 4899999999999999999999998 999999999999999999999999999876543
Q ss_pred Cccc--ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 238 QAYL--STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 238 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
.... .....++..|+|||.+.+..++.++||||||+++|||+||..|+......... ...............+.++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE-MIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh-hhcccccccchhhhhhhhhc
Confidence 3211 12234566799999998889999999999999999999999987543221100 00000000000011111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.... ..+...+..+.+++.+||+.+|++|||++++++.|+..
T Consensus 240 ~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 240 GMRL-PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCC-CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 1111 11223456789999999999999999999999998754
No 106
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.1e-41 Score=309.71 Aligned_cols=253 Identities=27% Similarity=0.422 Sum_probs=206.4
Q ss_pred hcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.++|++.++||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++|+|++++++++. .+..+++|||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 46788889999999999999998889999999986433 23457889999999999999999999874 4568999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+.+++|.+++.......+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||++.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 99999999987666667899999999999999999999988 999999999999999999999999999876543332
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
......++..|+|||.+....++.++||||||+++|||++ |+.||...... .... .+..+...
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~-~~~~~~~~--------- 222 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP------EVIQ-NLERGYRM--------- 222 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH------HHHH-HHHcCCCC---------
Confidence 2233456778999999998899999999999999999999 99888643321 1111 11111100
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
......+..+.+++.+||+.+|++||+++++++.|+
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 223 -PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 011223456999999999999999999999999986
No 107
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=9.5e-42 Score=310.13 Aligned_cols=253 Identities=26% Similarity=0.427 Sum_probs=204.1
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|++.+.||+|+||.||+|...++..+|+|.+..... ....+.+|+.++++++|+|++++++++. ....+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 56788899999999999999988888999999864332 3456899999999999999999999885 45678999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++++|.+++.......+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||++..+.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 9999999997655556899999999999999999999998 9999999999999999999999999998765433222
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||...... ... .....+.. .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~~~-~~~~~~~~-----~----- 222 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR------EVL-EQVERGYR-----M----- 222 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH------HHH-HHHHcCCC-----C-----
Confidence 223345678999999988899999999999999999999 78887543211 111 11111100 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0112234568999999999999999999999998863
No 108
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-43 Score=327.71 Aligned_cols=261 Identities=27% Similarity=0.395 Sum_probs=218.8
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEecC-CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
++....+.....+||.|.||.||.|.++. ...||||.++.+ ....++|+.|..+|+.++|||+|+++|+|.....+|
T Consensus 262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED--tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc--chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 33334556667899999999999998754 678999998644 345678999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
||+|||..|+|.+++....+..++--..+.++.||+.||+||..++ +|||||..+|+|+.++..||++||||++++.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 9999999999999998888777888889999999999999999998 9999999999999999999999999999998
Q ss_pred CCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 236 EDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
.+.+.......-...|.|||-+.-+.++.|+|||+|||+|||+.|-......... ...++.+++.+ .
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid------lSqVY~LLEkg-------y 483 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYGLLEKG-------Y 483 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc------HHHHHHHHhcc-------c
Confidence 8877655556667899999999999999999999999999999985432221111 12233444432 3
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+|. .++.|+..+++|++.||+++|.+||++.|+-+.++..
T Consensus 484 RM~---~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 484 RMD---GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred ccc---CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 333 3456778899999999999999999999998887744
No 109
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.4e-41 Score=318.40 Aligned_cols=260 Identities=20% Similarity=0.226 Sum_probs=201.0
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+++.. +++.+|+|.+.... .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36788899999999999999865 47889999985322 2223445788999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999998643 245899999999999999999999998 9999999999999999999999999997654443
Q ss_pred cccccccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...... .............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~------~~~~~i~~~~~~~--- 227 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKERF--- 227 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH------HHHHHHhCCCccc---
Confidence 33333457999999999886 346789999999999999999999999643221 1111211111000
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhhcc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQ--RPPMSEIVAMLTCK 358 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~l~~~ 358 (407)
.. .......+..+.+++.+|++.++++ |+++.++++|-+..
T Consensus 228 --~~--p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~ 270 (332)
T cd05623 228 --QF--PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFT 270 (332)
T ss_pred --cC--CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcC
Confidence 00 0011123456778888888654444 78999999997653
No 110
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.9e-41 Score=321.71 Aligned_cols=258 Identities=21% Similarity=0.277 Sum_probs=198.1
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|+..+.||+|+||+||++... +++.||+|++.... .......+.+|+.++..++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888899999999999999754 58999999986432 2233456788999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 99999999999854 346899999999999999999999998 9999999999999999999999999997543211
Q ss_pred c----------------------------------ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCC
Q 040557 239 A----------------------------------YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284 (407)
Q Consensus 239 ~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p 284 (407)
. ......+||+.|+|||.+.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 001235799999999999999999999999999999999999999
Q ss_pred CCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccC--CCCCCCCCHHHHHHHhhcc
Q 040557 285 TDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQ--PHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~--~~p~~RPs~~ev~~~l~~~ 358 (407)
|....+.+ ....... ....-.+.+.. . ....+.+++.+++. .++..||+++||++|-+..
T Consensus 236 f~~~~~~~------~~~~i~~-~~~~~~~p~~~---~----~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~ 297 (363)
T cd05628 236 FCSETPQE------TYKKVMN-WKETLIFPPEV---P----ISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFE 297 (363)
T ss_pred CCCCCHHH------HHHHHHc-CcCcccCCCcC---C----CCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCC
Confidence 97543221 1111111 10000011110 0 12345566665333 3444679999999997754
No 111
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=291.42 Aligned_cols=263 Identities=27% Similarity=0.324 Sum_probs=208.7
Q ss_pred HHhcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC-----C
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG-----S 152 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 152 (407)
...++|++.+.||.|||+-||.++ ..+++.||+|++.... .++.+..++|++.-++++|||+++++++...+ .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 345789999999999999999997 5689999999986544 56778889999999999999999999987443 3
Q ss_pred eeEEEEEeccCCChhHHHhccC--CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccC
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES--DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGL 230 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 230 (407)
..|++++|+..|+|.+.+...+ +..+++...++|+.++++||++||+.. ++++||||||.|||+.+.+.++|.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccC
Confidence 4899999999999999886544 457999999999999999999999985 6799999999999999999999999999
Q ss_pred ccccCCCCcc--------cccccccCccccCcccccc---CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHH
Q 040557 231 ARFFPEDQAY--------LSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 231 a~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~ 299 (407)
++..+-.-.. ......-|..|.|||.+.- ...++++|||||||+||+|+.|..||+......
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G------- 248 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG------- 248 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC-------
Confidence 9865421110 0112345889999998753 467899999999999999999999997433211
Q ss_pred HHHHHHhCcccc-ccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 300 AWKLYERGRILE-LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 300 ~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+.+.- +..+.+... .....+..+.+++.+|++.||.+||++.+++.++...
T Consensus 249 -------gSlaLAv~n~q~s~P-~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 249 -------GSLALAVQNAQISIP-NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -------CeEEEeeeccccccC-CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11111 111222211 1112566789999999999999999999999988643
No 112
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.2e-41 Score=313.20 Aligned_cols=258 Identities=28% Similarity=0.432 Sum_probs=206.5
Q ss_pred hcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCe
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 153 (407)
.++|+..+.||+|+||.||++... +...+|+|.+...........+.+|++++.++ +|+||+++++++...+.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 356788899999999999999753 23679999987554555556788999999999 89999999999999999
Q ss_pred eEEEEEeccCCChhHHHhcc--------------CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC
Q 040557 154 RLLVYEYMKNRSLDLLIYGE--------------SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE 219 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~ 219 (407)
.+++|||+++|+|..++... ....+++..+.+++.|++.|+.|||+.+ ++||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcC
Confidence 99999999999999998642 2356899999999999999999999988 999999999999999
Q ss_pred CCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchh
Q 040557 220 KFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLP 297 (407)
Q Consensus 220 ~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~ 297 (407)
++.++|+|||+++.+....... .....++..|+|||.+.+..++.++|||||||++|||++ |..|+......
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------ 241 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE------ 241 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH------
Confidence 9999999999998765433211 122335678999999988899999999999999999998 88877532211
Q ss_pred HHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 298 EYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 298 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
........+... ..+......+.+++.+||+.||++|||+.++++.|+..
T Consensus 242 -~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 242 -ELFKLLKEGYRM----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred -HHHHHHHcCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 112222221111 01122345688999999999999999999999999764
No 113
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9.4e-42 Score=319.74 Aligned_cols=246 Identities=22% Similarity=0.312 Sum_probs=198.5
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|+.. +++.||+|.+.... .......+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999864 57899999986432 223445677899998866 799999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++........ ...
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~~ 154 (321)
T cd05591 81 GDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV-TTT 154 (321)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCCc-ccc
Confidence 999988853 345899999999999999999999998 99999999999999999999999999975433222 223
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ........ +.. . .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~------~~~~~i~~-~~~---~--------~p 216 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED------DLFESILH-DDV---L--------YP 216 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH------HHHHHHHc-CCC---C--------CC
Confidence 457899999999999999999999999999999999999999754321 11111111 110 0 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-------CHHHHHHHhhc
Q 040557 324 ERDALQVINVAFICLQPHGNQRP-------PMSEIVAMLTC 357 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RP-------s~~ev~~~l~~ 357 (407)
......+.+++..||+.||++|| ++.++++|.+.
T Consensus 217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~ 257 (321)
T cd05591 217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFF 257 (321)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence 11235688999999999999999 89999998765
No 114
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.2e-41 Score=308.09 Aligned_cols=253 Identities=28% Similarity=0.440 Sum_probs=203.8
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|++.+.||+|+||.||+|...++..||+|.+.... .....+.+|+++++.++|+||+++++++.. ...++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc--cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 5688899999999999999988777789999986422 234578899999999999999999998754 5679999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 9999999997655556899999999999999999999988 9999999999999999999999999998765443322
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||...+..++.++||||||+++|||+| |..||...... ........+.. .
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-------~~~~~~~~~~~-----~----- 222 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-------EVLDQVERGYR-----M----- 222 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-------HHHHHHhcCCC-----C-----
Confidence 223446778999999988899999999999999999999 77777543221 11111111100 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
......+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 223 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 1122345678899999999999999999999999864
No 115
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.7e-42 Score=320.44 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=198.7
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|+.. +++.||+|++.... .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999864 58899999986432 223445677888888876 799999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++........ ...
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~-~~~ 154 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK-TTS 154 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-ccc
Confidence 9999888533 45899999999999999999999998 99999999999999999999999999875432221 123
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .. ...+..+.. ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~-~~~i~~~~~-----------~~~ 216 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED------DL-FEAILNDEV-----------VYP 216 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HH-HHHHhcCCC-----------CCC
Confidence 457999999999999999999999999999999999999999753321 11 111111111 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH------HHHHHHhhcc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPM------SEIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~------~ev~~~l~~~ 358 (407)
......+.+++.+||+.||++||++ ++++.|-+..
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~ 257 (320)
T cd05590 217 TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFK 257 (320)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcC
Confidence 1234568899999999999999998 8888887753
No 116
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-41 Score=307.63 Aligned_cols=248 Identities=29% Similarity=0.400 Sum_probs=197.8
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
+.||+|+||.||+|... +++.||+|.+...........+.+|+++++.++|+||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999864 68999999886544455567899999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc-ccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS-TNF 245 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-~~~ 245 (407)
.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........... ...
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 9998543 345899999999999999999999988 99999999999999999999999999976543221111 111
Q ss_pred ccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCH
Q 040557 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVE 324 (407)
Q Consensus 246 ~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 324 (407)
..+..|+|||.+.++.++.++||||||+++|||++ |..|+...... ........+... ..+.
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-------~~~~~~~~~~~~----------~~~~ 219 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-------QTREAIEQGVRL----------PCPE 219 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-------HHHHHHHcCCCC----------CCcc
Confidence 23457999999999899999999999999999998 77777532211 111111111000 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 325 RDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 325 ~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 23457889999999999999999999999885
No 117
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.2e-41 Score=317.58 Aligned_cols=246 Identities=23% Similarity=0.296 Sum_probs=193.9
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHH-HHHcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVR-MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... +|+.||+|++.... .......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999864 68999999986432 1222344555554 45778999999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++........ ...
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~ 154 (323)
T cd05575 81 GELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK-TTS 154 (323)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC-ccc
Confidence 999988853 346899999999999999999999998 99999999999999999999999999975432221 223
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ...... ..+.. .+ .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~------~~~~~i-~~~~~------~~-----~ 216 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA------EMYDNI-LNKPL------RL-----K 216 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH------HHHHHH-HcCCC------CC-----C
Confidence 457999999999999999999999999999999999999998643211 111111 11110 11 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH----HHHHHHhhc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPM----SEIVAMLTC 357 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~----~ev~~~l~~ 357 (407)
...+..+.+++.+||+.||++||++ .+++++.+.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~ 254 (323)
T cd05575 217 PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFF 254 (323)
T ss_pred CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCc
Confidence 1224568899999999999999987 588877664
No 118
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.7e-41 Score=311.91 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=199.4
Q ss_pred eeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
||+|+||+||++... +|+.||+|.+..... ......+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999754 689999999864322 22345678899999999999999999999999999999999999999
Q ss_pred hHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccc
Q 040557 167 DLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244 (407)
Q Consensus 167 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 244 (407)
..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++......... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc-ccc
Confidence 8887532 3456899999999999999999999998 999999999999999999999999999866543321 234
Q ss_pred cccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCH
Q 040557 245 FAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVE 324 (407)
Q Consensus 245 ~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 324 (407)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ....... ...... ..+.
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~--------~~~~~~---~~~~ 222 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE---NKELKQR--------ILNDSV---TYPD 222 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh---HHHHHHh--------hcccCC---CCcc
Confidence 5789999999999999999999999999999999999999865322110 0000000 000111 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhc
Q 040557 325 RDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTC 357 (407)
Q Consensus 325 ~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~ 357 (407)
..+..+.+++.+||+.||++|| +++++++|-|.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~ 260 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLF 260 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhh
Confidence 3455688999999999999999 78999988765
No 119
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.5e-41 Score=305.43 Aligned_cols=248 Identities=30% Similarity=0.415 Sum_probs=200.8
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChh
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLD 167 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 167 (407)
++||+|+||.||+|...++..+|+|.+...........+.+|+++++.++|+||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999865555555567899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccccccc
Q 040557 168 LLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG 247 (407)
Q Consensus 168 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g 247 (407)
+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...............+
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 9886433 45899999999999999999999988 9999999999999999999999999997654332222222344
Q ss_pred CccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 248 TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 248 t~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
+..|+|||++.+..++.++||||||+++||+++ |..||...... ........+.. . ..+...
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-------~~~~~~~~~~~-------~---~~~~~~ 219 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-------QAREQVEKGYR-------M---SCPQKC 219 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-------HHHHHHHcCCC-------C---CCCCCC
Confidence 667999999998899999999999999999998 88888543221 11111111110 0 011123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 327 ALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+..+.+++.+||+.+|++||++.++++.|.
T Consensus 220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 220 PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 457899999999999999999999999874
No 120
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.7e-41 Score=315.75 Aligned_cols=246 Identities=21% Similarity=0.297 Sum_probs=192.5
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHH-HHHcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVR-MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|+.. +|+.||+|.+.... .......+..|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999864 68899999986432 1223344555654 57788999999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~ 154 (321)
T cd05603 81 GELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE-TTS 154 (321)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC-ccc
Confidence 999888753 345888899999999999999999988 99999999999999999999999999875422221 223
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ........ .+. . ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~-~~~--------~---~~~ 216 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV------SQMYDNIL-HKP--------L---QLP 216 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH------HHHHHHHh-cCC--------C---CCC
Confidence 45789999999999998999999999999999999999999865321 11111111 111 0 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH----HHHHHHhhc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPM----SEIVAMLTC 357 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~----~ev~~~l~~ 357 (407)
......+.+++.+||+.||++||+. .+++++.+.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~ 254 (321)
T cd05603 217 GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFF 254 (321)
T ss_pred CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCc
Confidence 1234568899999999999999875 477776654
No 121
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.6e-41 Score=313.78 Aligned_cols=257 Identities=30% Similarity=0.455 Sum_probs=205.3
Q ss_pred CCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
+|++.+.||+|+||.||+|... ....+++|.+...........+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999752 2357899988655555556788999999999999999999999999999999
Q ss_pred EEEeccCCChhHHHhccC----------------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeecccccc
Q 040557 157 VYEYMKNRSLDLLIYGES----------------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASN 214 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~N 214 (407)
++||+.+|+|.+++.... ...+++..++.++.|++.|+.|||+.+ ++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999875321 234789999999999999999999988 9999999999
Q ss_pred EEEcCCCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcc
Q 040557 215 VLLDEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSE 292 (407)
Q Consensus 215 ill~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~ 292 (407)
||+++++.++|+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||....+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 999999999999999998654333221 122345678999999988899999999999999999999 8888864322
Q ss_pred cCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 293 MQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
...+.....+.. .. .+...+..+.+++.+||+.+|++||++.++++.|+...
T Consensus 236 -----~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 236 -----ERLFNLLKTGYR-----ME-----RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred -----HHHHHHHhCCCC-----CC-----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 122222222110 00 11223456889999999999999999999999997653
No 122
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-41 Score=311.73 Aligned_cols=256 Identities=29% Similarity=0.401 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 154 (407)
.++|.+.+.||+|+||.||+|.+. .+..||+|.+...........|.+|+.+++.++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 467888899999999999999864 35689999886555555567799999999999999999999999988899
Q ss_pred EEEEEeccCCChhHHHhccCC-----CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC---ceEEe
Q 040557 155 LLVYEYMKNRSLDLLIYGESD-----KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF---QSKIG 226 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~---~~kl~ 226 (407)
++||||+++++|.+++..... ..+++..+.+++.||+.|+.|||+.+ ++||||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence 999999999999999865432 25899999999999999999999998 99999999999998654 59999
Q ss_pred cccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHH
Q 040557 227 DFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLY 304 (407)
Q Consensus 227 Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 304 (407)
|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |..||....... .....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-------~~~~~ 234 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-------VMEFV 234 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHH
Confidence 999998764322211 112234568999999999999999999999999999997 888876432211 11111
Q ss_pred HhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 305 ERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 305 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+... ..+...+..+.+++.+||+.+|++||++.+|+++|.
T Consensus 235 ~~~~~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGGGRL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcCCcC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111100 011223456889999999999999999999999985
No 123
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2e-41 Score=317.05 Aligned_cols=247 Identities=25% Similarity=0.328 Sum_probs=198.9
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... +++.||+|.+.... .......+..|.+++..+ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 57899999986542 223445677899999887 799999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........ ...
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~ 154 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV-TTS 154 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-ccc
Confidence 9999887533 45899999999999999999999998 99999999999999999999999999975322221 123
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...|+..|+|||.+.+..++.++|||||||++|||++|+.||...... . .......... . .+
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~------~-~~~~i~~~~~------~-----~~ 216 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED------E-LFQSILEDEV------R-----YP 216 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH------H-HHHHHHcCCC------C-----CC
Confidence 356899999999999999999999999999999999999998643211 1 1111111110 0 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHHhhcc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPM-----SEIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~-----~ev~~~l~~~ 358 (407)
...+..+.+++.+||+.||++||++ .+++++-+..
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~ 256 (318)
T cd05570 217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFR 256 (318)
T ss_pred CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcC
Confidence 1234568899999999999999999 9999887654
No 124
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-41 Score=335.07 Aligned_cols=262 Identities=24% Similarity=0.350 Sum_probs=208.3
Q ss_pred HHHHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC
Q 040557 75 QTLKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152 (407)
Q Consensus 75 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 152 (407)
.+.+...++|++.+.||+|+||+||+|+. .+|+.||||.+.... .......+.+|+..+..++|+|++++.+.+...+
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 34445567999999999999999999975 479999999986543 3445567889999999999999999887764322
Q ss_pred --------eeEEEEEeccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc
Q 040557 153 --------QRLLVYEYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ 222 (407)
Q Consensus 153 --------~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~ 222 (407)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCC
Confidence 367999999999999988643 2456899999999999999999999988 999999999999999999
Q ss_pred eEEecccCccccCCCCc-ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHH
Q 040557 223 SKIGDFGLARFFPEDQA-YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 223 ~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~ 301 (407)
+||+|||+++.+..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .....
T Consensus 182 vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------~~~~~ 255 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------EEVMH 255 (496)
T ss_pred EEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------HHHHH
Confidence 99999999987653321 122346799999999999999999999999999999999999999864321 11111
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
... .+... ..+...+..+.+++.+||+.||++||++.+++++.+
T Consensus 256 ~~~-~~~~~----------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~ 299 (496)
T PTZ00283 256 KTL-AGRYD----------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPI 299 (496)
T ss_pred HHh-cCCCC----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHH
Confidence 111 11111 012223456889999999999999999999998754
No 125
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6e-41 Score=303.89 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=207.6
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||+|++|.||+|... +|+.|++|.+.... .......+.+|+++++.++|+|++++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4667789999999999999864 68999999986432 344567789999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 99999999997655567899999999999999999999988 999999999999999999999999999876544322
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....|++.|+|||+..+..++.++||||||+++|||++|+.||...... .... ....+...
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~-~~~~~~~~---------- 219 (256)
T cd08529 158 -ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG------ALIL-KIIRGVFP---------- 219 (256)
T ss_pred -hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH------HHHH-HHHcCCCC----------
Confidence 23356889999999999999999999999999999999999998644311 1111 11111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
......+..+.+++.+||+.+|++||++.+++++-
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 254 (256)
T cd08529 220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254 (256)
T ss_pred CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCC
Confidence 11123456789999999999999999999999874
No 126
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.6e-41 Score=311.42 Aligned_cols=257 Identities=26% Similarity=0.350 Sum_probs=205.6
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.|+..+.||+|+||.||++... +++.||+|.+..... ......+.+|+.++..++|+|++++.+.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3667789999999999999754 689999999864332 2233567789999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 999999999886555556899999999999999999999988 99999999999999999999999999976543332
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. ....|+..|+|||.+.+..++.++||||||+++|||++|+.||........ ............ ..
T Consensus 158 ~--~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~~~------~~--- 223 (285)
T cd05630 158 I--KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERLVKEVQ------EE--- 223 (285)
T ss_pred c--cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch---HHHHHhhhhhhh------hh---
Confidence 1 234689999999999999999999999999999999999999975332110 011111111000 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhcc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTCK 358 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~~ 358 (407)
........+.+++.+||+.||++||| +.|+++|-+..
T Consensus 224 --~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~ 265 (285)
T cd05630 224 --YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK 265 (285)
T ss_pred --cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence 11223445789999999999999999 89999987753
No 127
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.6e-41 Score=318.58 Aligned_cols=251 Identities=24% Similarity=0.275 Sum_probs=199.5
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCC-CceeeeeeeeecCCeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQH-KNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 158 (407)
+|++.+.||+|+||.||+|... +++.||+|++.... .......+..|.+++..+.| ++|+++.+++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4777889999999999999865 57899999986432 22345677889999999965 56888999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 999999999888533 45899999999999999999999998 9999999999999999999999999987532222
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ..... ..... ..
T Consensus 156 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~-i~~~~------~~-- 219 (324)
T cd05587 156 K-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------ELFQS-IMEHN------VS-- 219 (324)
T ss_pred C-ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHH-HHcCC------CC--
Confidence 1 123457999999999999999999999999999999999999999743221 11111 11111 01
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHHhhc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPM-----SEIVAMLTC 357 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~-----~ev~~~l~~ 357 (407)
.+...+..+.+++.+||+.||++|++. .++.+|.+.
T Consensus 220 ---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~ 260 (324)
T cd05587 220 ---YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFF 260 (324)
T ss_pred ---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCc
Confidence 111234567899999999999999986 788877654
No 128
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.9e-41 Score=308.72 Aligned_cols=256 Identities=28% Similarity=0.407 Sum_probs=201.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCc----EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
++|+..+.||+|+||.||+|... +|. .+++|.+..........++..|+..++.++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 45777889999999999999863 344 4788887543334445678888999999999999999999864 45788
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
++||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999986433 45899999999999999999999988 99999999999999999999999999987643
Q ss_pred CCc-ccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 237 DQA-YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 237 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
... .......++..|+|||.+.++.++.++||||||+++|||++ |+.|+....+. .....+..+.... .
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~--~ 232 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------EVPDLLEKGERLA--Q 232 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCCcCC--C
Confidence 322 12233457778999999998999999999999999999998 88888643321 1122222222111 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+ ..+...+.+++.+||+.||++|||+.|+++.|....
T Consensus 233 ~--------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 233 P--------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred C--------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1 112345788999999999999999999999987643
No 129
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5e-41 Score=308.19 Aligned_cols=255 Identities=29% Similarity=0.429 Sum_probs=205.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
++|++.+.||+|+||.||+|... .+..||+|.+...........+.+|+.++..++|+||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 57888899999999999999753 246899999865544455667899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccC--------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEec
Q 040557 156 LVYEYMKNRSLDLLIYGES--------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGD 227 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~D 227 (407)
+||||+++|+|.+++.... ...+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.++|+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECC
Confidence 9999999999999986432 234788999999999999999999988 99999999999999999999999
Q ss_pred ccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHH
Q 040557 228 FGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYE 305 (407)
Q Consensus 228 fgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 305 (407)
||+++........ ......++..|+|||.+.+..++.++|||||||++|||+| |..|+....... ..+...
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~ 235 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-------VLKFVI 235 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-------HHHHHh
Confidence 9999866443321 2233456789999999988889999999999999999998 888875432211 112222
Q ss_pred hCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 306 RGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 306 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+.... .+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 236 ~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 DGGHLD----------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred cCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 221111 11123567889999999999999999999999885
No 130
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.6e-41 Score=317.01 Aligned_cols=251 Identities=24% Similarity=0.288 Sum_probs=199.8
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 158 (407)
+|++.+.||+|+||.||+|... +++.||+|.+.... .......+..|..++..+ +|++|+++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777889999999999999865 57899999986432 222344567788888877 6899999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999999888543 45899999999999999999999998 9999999999999999999999999997543222
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ..... +.....
T Consensus 156 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~------~~~~~-i~~~~~--------- 218 (323)
T cd05616 156 V-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQS-IMEHNV--------- 218 (323)
T ss_pred C-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH------HHHHH-HHhCCC---------
Confidence 1 123467999999999999999999999999999999999999999753321 11111 111111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTC 357 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~ 357 (407)
..+......+.+++.+||+.||++|++ ..++.+|-+.
T Consensus 219 --~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~ 260 (323)
T cd05616 219 --AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 260 (323)
T ss_pred --CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCc
Confidence 011223456889999999999999998 4788777543
No 131
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.4e-41 Score=321.56 Aligned_cols=264 Identities=20% Similarity=0.217 Sum_probs=206.2
Q ss_pred HHHHHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC
Q 040557 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152 (407)
Q Consensus 76 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 152 (407)
.+....++|++.+.||+|+||.||+++.. +++.||+|.+.... .......+.+|..+++.++||||+++++++.++.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445588999999999999999999865 58899999985422 2233456788999999999999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..++||||+++|+|..++... .+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 999999999999999988532 4788889999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCcccccccccCccccCccccccC----CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCc
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIRG----ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR 308 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 308 (407)
..............||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ...........
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~ 264 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKN 264 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCC
Confidence 7654433333456799999999998753 3789999999999999999999999753221 11122211111
Q ss_pred cccccCcccccCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhhccc
Q 040557 309 ILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQ--RPPMSEIVAMLTCKV 359 (407)
Q Consensus 309 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~ev~~~l~~~~ 359 (407)
..... .....+..+.+++..|++.++.+ ||++.++++|.+...
T Consensus 265 ~~~~~--------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 265 SLTFP--------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred cccCC--------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 11100 01123455788999999854443 789999999987643
No 132
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.4e-41 Score=314.27 Aligned_cols=259 Identities=27% Similarity=0.428 Sum_probs=207.5
Q ss_pred HhcCCCCCCeeeccCCccEEEEEe------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGS 152 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 152 (407)
..++|...+.||+|+||.||+|.. .++..||+|.+.........+.+.+|+.+++++ +|+||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 336788899999999999999964 135579999986554445556789999999999 7999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..+++|||+.+|+|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence 9999999999999999997555555899999999999999999999988 9999999999999999999999999998
Q ss_pred ccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccc
Q 040557 233 FFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRIL 310 (407)
Q Consensus 233 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (407)
........ ......++..|+|||.+.+..++.++|||||||++|||++ |..|+...... .........+...
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~------~~~~~~~~~~~~~ 263 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD------SKFYKLIKEGYRM 263 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch------HHHHHHHHcCCcC
Confidence 66543321 1222346778999999999999999999999999999998 88887543221 1111122211100
Q ss_pred cccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 311 ELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
. .+...+..+.+++.+||+.+|++|||+.++++.|..
T Consensus 264 -------~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 264 -------A---QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred -------C---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 0 111124568899999999999999999999999864
No 133
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.8e-41 Score=306.51 Aligned_cols=254 Identities=25% Similarity=0.378 Sum_probs=204.4
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC----hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS----QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
++|...+.||+|++|.||.|.. .+++.||+|.+..... ......+.+|++++++++|+||+++++++......++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999985 4689999999864322 1234568899999999999999999999999999999
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
|+||+++++|.+++... ..+++.....++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999988543 45889999999999999999999998 99999999999999999999999999986543
Q ss_pred CCcccc--cccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 237 DQAYLS--TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 237 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
...... ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........... .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~-~---- 225 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQPT-N---- 225 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH------HHHHHHhccCC-C----
Confidence 222111 2345788999999999988999999999999999999999998643211 11111111100 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. ..+......+.+++.+||+.+|++|||+.+++++.+
T Consensus 226 ~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 226 P-----QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred C-----CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 0 112223456889999999999999999999999875
No 134
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.8e-41 Score=325.07 Aligned_cols=263 Identities=26% Similarity=0.386 Sum_probs=207.1
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeee
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCS 149 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 149 (407)
.+...++|.+++.||+|+||.||+|++. .++.||+|++...........+.+|+++|.++. |+||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3344567888899999999999999853 346899999975544444557899999999997 999999999999
Q ss_pred cCCeeEEEEEeccCCChhHHHhccC-------------------------------------------------------
Q 040557 150 DGSQRLLVYEYMKNRSLDLLIYGES------------------------------------------------------- 174 (407)
Q Consensus 150 ~~~~~~lv~e~~~~g~L~~~l~~~~------------------------------------------------------- 174 (407)
.....++||||+++|+|.++++...
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 9999999999999999999986432
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccc
Q 040557 175 -----------------------------------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKAS 213 (407)
Q Consensus 175 -----------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~ 213 (407)
...+++..+..++.|++.||.|||+.+ ++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcc
Confidence 124677888999999999999999987 999999999
Q ss_pred cEEEcCCCceEEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCc
Q 040557 214 NVLLDEKFQSKIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPS 291 (407)
Q Consensus 214 Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~ 291 (407)
|||+++++.++|+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.|+......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 999999999999999999865432221 1223456788999999998889999999999999999998 78887543211
Q ss_pred ccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 292 EMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.........+.. .. .+......+.+++.+||+.+|++||++++|++.|+..
T Consensus 349 ------~~~~~~~~~~~~-------~~---~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 349 ------EQFYNAIKRGYR-------MA---KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred ------HHHHHHHHcCCC-------CC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 111122221110 00 1112345689999999999999999999999999754
No 135
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2e-41 Score=323.99 Aligned_cols=268 Identities=26% Similarity=0.320 Sum_probs=202.4
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-----eeE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS-----QRL 155 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 155 (407)
+|++.+.||+|+||.||++.. .+|+.||+|++.... .......+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999986 478999999985432 2334567889999999999999999999998776 789
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
+||||+. ++|..++. ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999997 57777764 3346899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCcccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCch---------hHH------
Q 040557 236 EDQAYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYL---------PEY------ 299 (407)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~---------~~~------ 299 (407)
...........+++.|+|||.+.+. .++.++|||||||++|||++|+.||....+...... ...
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 4433333345688999999988774 579999999999999999999999975443211000 000
Q ss_pred -HHHHHHhCccccccCccccc-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 300 -AWKLYERGRILELVDPRMRK-EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 300 -~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
....+...... .+.... ..........+.+++.+||+.||++|||+.|+++|.+...
T Consensus 235 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 235 GARAHILRGPHK---PPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHHHhCCCC---CCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 00000000000 000000 0011112456889999999999999999999999987543
No 136
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.4e-41 Score=310.92 Aligned_cols=262 Identities=23% Similarity=0.408 Sum_probs=201.0
Q ss_pred cCCCCCCeeeccCCccEEEEEecC---------------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD---------------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 146 (407)
++|++.+.||+|+||.||++...+ ...||+|.+...........|.+|++++.+++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578888999999999999987532 23589999865545555667999999999999999999999
Q ss_pred eeecCCeeEEEEEeccCCChhHHHhccC----------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEE
Q 040557 147 CCSDGSQRLLVYEYMKNRSLDLLIYGES----------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVL 216 (407)
Q Consensus 147 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nil 216 (407)
++...+..++||||+.+++|.+++.... ...+++..+..++.|++.|+.|||+.+ ++|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 9999999999999999999999885421 123688999999999999999999998 999999999999
Q ss_pred EcCCCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHhc--CCCCCCCCCccc
Q 040557 217 LDEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISC--RKNTDLTLPSEM 293 (407)
Q Consensus 217 l~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg--~~p~~~~~~~~~ 293 (407)
+++++.+||+|||++.......... .....++..|+|||.+.++.++.++||||||++++||+++ ..||.......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 9999999999999998654332211 1223456789999999988999999999999999999984 44554322211
Q ss_pred CchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 294 QYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.................. ..+...+..+.+++.+||+.||++|||+++|++.|.
T Consensus 241 --~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 --VIENTGEFFRNQGRQIYL-------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred --HHHHHHHhhhhccccccC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 000011111110000000 011113457999999999999999999999999885
No 137
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1e-40 Score=309.10 Aligned_cols=263 Identities=26% Similarity=0.432 Sum_probs=204.3
Q ss_pred hcCCCCCCeeeccCCccEEEEEecC-----------------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLAD-----------------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 143 (407)
.++|++.+.||+|+||.||+|...+ +..||+|.+...........+.+|++++.+++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578889999999999999987542 24589999876555566778999999999999999999
Q ss_pred eeeeeecCCeeEEEEEeccCCChhHHHhccC---------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeecccccc
Q 040557 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGES---------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASN 214 (407)
Q Consensus 144 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~N 214 (407)
+++++...+..+++|||+++++|..++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999999999999999999999986433 125899999999999999999999988 9999999999
Q ss_pred EEEcCCCceEEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh--cCCCCCCCCCc
Q 040557 215 VLLDEKFQSKIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPS 291 (407)
Q Consensus 215 ill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t--g~~p~~~~~~~ 291 (407)
|++++++.++|+|||++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..|+......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 99999999999999999865433221 1223456778999999988899999999999999999998 55565432211
Q ss_pred ccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 292 EMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. ........+......... ..+...+.++.+++.+||+.||++|||+.+|++.|.
T Consensus 241 ~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 Q---VIENAGHFFRDDGRQIYL-------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred H---HHHHHHhccccccccccC-------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 0 000111110000000000 011123457899999999999999999999999885
No 138
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.1e-41 Score=314.45 Aligned_cols=269 Identities=22% Similarity=0.297 Sum_probs=205.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|++.+.||+|+||.||++... +|..+|+|.+...........+.+|++++.+++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888899999999999999854 68889999886544444556788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
+++++|.+++... ..+++..+..++.|++.||.|||+ .+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 9999999998543 558999999999999999999997 45 9999999999999999999999999987653322
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCc-----------
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR----------- 308 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 308 (407)
.....++..|+|||.+.+..++.++||||||+++|||++|+.|+.......................
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPD 232 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCC
Confidence 2345788999999999888899999999999999999999999864322111000000000000000
Q ss_pred ------cccccCcccc---cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 309 ------ILELVDPRMR---KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 309 ------~~~~~d~~~~---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+..+.... ...........+.+++.+||+.+|++|||+.+++++.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~ 291 (308)
T cd06615 233 SPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK 291 (308)
T ss_pred ccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 0000000000 0000011345688999999999999999999999998864
No 139
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7.6e-41 Score=304.22 Aligned_cols=253 Identities=27% Similarity=0.435 Sum_probs=203.4
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|.+...||+|++|.||+|...++..+|+|.+.... .....+.+|+++++.++|+|++++++++.. +..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcC
Confidence 4577888999999999999998777789999875332 234578899999999999999999998854 5678999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
.+|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 9999999997655556899999999999999999999988 9999999999999999999999999998765433222
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.|+...... . .......+.. .
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~-~~~~~~~~~~-----~----- 222 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR------E-VLEQVERGYR-----M----- 222 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCC-----C-----
Confidence 223446778999999988899999999999999999999 88887643221 1 1111111110 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.||++||++++|++.|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1122345678899999999999999999999999863
No 140
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6e-41 Score=303.94 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=206.4
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
+|++.+.||+|+||.||++... ++..+|+|.+.........+.+.+|+.+++.++|+||+++.+.+.+++..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677889999999999999854 689999999865554555677889999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++|+|.+++.......+++.....++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++........ .
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-Y 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc-c
Confidence 9999999886655666899999999999999999999998 99999999999999999999999999986654322 1
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
.....|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...... ..+... .
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~----------~ 219 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK------NLILKV-CQGSYK----------P 219 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH------HHHHHH-hcCCCC----------C
Confidence 23456889999999998888999999999999999999999998643211 111111 111111 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
.+...+..+.+++.+||+.||++||++.+++..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 112234568899999999999999999999864
No 141
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=326.91 Aligned_cols=249 Identities=29% Similarity=0.427 Sum_probs=208.0
Q ss_pred CCeeeccCCccEEEEEe-cCCc----EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 87 GNLLGRGGFGPVYRGKL-ADGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
.++||+|+||+||+|.+ +.|+ +||+|++......+...++++|+-+|.+++|||+++++|+|.... ..||++|+
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m 779 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM 779 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence 57899999999999964 4444 689999987777777889999999999999999999999997766 78999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
+.|+|.++++.++ ..+-....+.|..|||+||.|||.+. ++||||..+|||+.+-..+|+.|||+++....+....
T Consensus 780 P~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 780 PLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred ccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999998654 45888999999999999999999988 9999999999999999999999999999887655443
Q ss_pred c-cccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 242 S-TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 242 ~-~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. ....-.+.|||-|.+....|+.++|||||||++||++| |..|++..... .+.+.++.+. ++
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-------eI~dlle~ge-------RL-- 919 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-------EIPDLLEKGE-------RL-- 919 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-------HhhHHHhccc-------cC--
Confidence 3 33345678999999999999999999999999999998 66776644322 2333333332 12
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..++.+..++..++.+||..|+..||+++++...+..
T Consensus 920 -sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~ 956 (1177)
T KOG1025|consen 920 -SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR 956 (1177)
T ss_pred -CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence 2345577889999999999999999999999887764
No 142
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-41 Score=325.23 Aligned_cols=256 Identities=22% Similarity=0.269 Sum_probs=198.3
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.|+..+.||+|+||.||+|+. .+++.||+|.+.... .......+.+|++++++++|+||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 577889999999999999985 468899999986432 22344678899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC-
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ- 238 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~- 238 (407)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999988543 45889999999999999999999998 9999999999999999999999999985332100
Q ss_pred ---------------------------------------------cccccccccCccccCccccccCCCCccccEEehhH
Q 040557 239 ---------------------------------------------AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGV 273 (407)
Q Consensus 239 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~ 273 (407)
.......+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00012346899999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHH
Q 040557 274 LVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP---MSE 350 (407)
Q Consensus 274 vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~e 350 (407)
++|||++|+.||....+.+ ......... ...... ........+.+++.+|+ .+|++|++ +.+
T Consensus 237 il~elltG~~Pf~~~~~~~------~~~~i~~~~-------~~~~~p-~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~e 301 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLE------TQMKVINWQ-------TSLHIP-PQAKLSPEASDLIIKLC-RGPEDRLGKNGADE 301 (382)
T ss_pred HHHHHHhCCCCCCCCCHHH------HHHHHHccC-------CCcCCC-CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHH
Confidence 9999999999997543221 111111100 000000 00112344667776665 49999997 999
Q ss_pred HHHHhhcc
Q 040557 351 IVAMLTCK 358 (407)
Q Consensus 351 v~~~l~~~ 358 (407)
+++|-+..
T Consensus 302 i~~hp~f~ 309 (382)
T cd05625 302 IKAHPFFK 309 (382)
T ss_pred HhcCCCcC
Confidence 99987653
No 143
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-42 Score=323.17 Aligned_cols=246 Identities=29% Similarity=0.426 Sum_probs=201.5
Q ss_pred eeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChh
Q 040557 89 LLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLD 167 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 167 (407)
+||+|.||+||.|++. +...+|||.+.... ....+.+..|+.+-+.++|.|||+++|.+..++..-+.||-++||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd-sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD-SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc-chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 6999999999999864 46679999986443 444567889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCC--CHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc-CCCceEEecccCccccCCCCcccccc
Q 040557 168 LLIYGESDKFL--NWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTN 244 (407)
Q Consensus 168 ~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~ 244 (407)
.++.. +.+++ ++.++-.+..||++||.|||++. |+|||||-+|||++ -.|.+||+|||-++.+..-+ ..+.+
T Consensus 661 sLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~TET 735 (1226)
T KOG4279|consen 661 SLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PCTET 735 (1226)
T ss_pred HHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCC-ccccc
Confidence 99864 34456 78888999999999999999998 99999999999997 57899999999998765433 23456
Q ss_pred cccCccccCccccccC--CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 245 FAGTLGYTAPEYAIRG--ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 245 ~~gt~~y~aPE~~~~~--~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
+.||..|||||++..+ .|..++|||||||++.||.||++||......... ++.-|-. . .....
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--------MFkVGmy------K-vHP~i 800 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--------MFKVGMY------K-VHPPI 800 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--------hhhhcce------e-cCCCC
Confidence 8899999999999876 5889999999999999999999999643222111 1111100 0 11235
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 323 VERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
+++...+...+|++|+.+||.+||++.++++-.
T Consensus 801 Peelsaeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 801 PEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred cHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 677788899999999999999999999998753
No 144
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.5e-41 Score=315.97 Aligned_cols=246 Identities=23% Similarity=0.289 Sum_probs=195.0
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|+.. +|+.||+|.+..... ......+..|..++... +|+||+++++++.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999865 688999999864321 22344567788888765 899999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.++|+|||+++....... ...
T Consensus 81 g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 154 (316)
T cd05620 81 GDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN-RAS 154 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-cee
Confidence 999988854 345899999999999999999999998 99999999999999999999999999875322111 223
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ........+. +. .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-------~~~~~~~~~~------~~-----~~ 216 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-------ELFESIRVDT------PH-----YP 216 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCC------CC-----CC
Confidence 467999999999999999999999999999999999999999643221 1111111110 11 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH-HHHHHHhhc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPM-SEIVAMLTC 357 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~-~ev~~~l~~ 357 (407)
......+.+++.+||+.||++||++ +++++|.+.
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f 251 (316)
T cd05620 217 RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFF 251 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCc
Confidence 1134467899999999999999998 477767654
No 145
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-41 Score=311.28 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=201.3
Q ss_pred CCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
|++.+.||+|+||.||+|... ++..||+|++...........+.+|+.++..++|+||+++++++......+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 555678999999999999753 25789999987554444456788999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCce
Q 040557 158 YEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS 223 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~ 223 (407)
+||+.+++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||.||++++++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCce
Confidence 99999999999885221 234788899999999999999999988 9999999999999999999
Q ss_pred EEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHH
Q 040557 224 KIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 224 kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~ 301 (407)
||+|||+++........ ......+++.|+|||.+.++.++.++|||||||++|||++ |..|+..... ....
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~~~~ 236 (283)
T cd05091 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDVI 236 (283)
T ss_pred EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHH
Confidence 99999999866433221 1223446789999999988899999999999999999998 7777654221 1112
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+... ..+..++..+.+++..||+.+|++||++++|++.|.
T Consensus 237 ~~i~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 237 EMIRNRQVL----------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHcCCcC----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 222222211 112234566889999999999999999999999885
No 146
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.8e-41 Score=306.64 Aligned_cols=256 Identities=24% Similarity=0.347 Sum_probs=201.9
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++.+++|+||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 35788899999999999999985 468899999985432 2334567899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|.+++.. ...+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||++........
T Consensus 87 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 87 YCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 9999999998853 345899999999999999999999988 99999999999999999999999999986643221
Q ss_pred ccccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 240 YLSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
......|+..|+|||.+. ...++.++|||||||++|||++|+.|+....+..... . ..... ...+.
T Consensus 162 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~-~~~~~---~~~~~ 230 (267)
T cd06646 162 -KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------L-MSKSN---FQPPK 230 (267)
T ss_pred -ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------e-eecCC---CCCCC
Confidence 122356889999999874 3457889999999999999999999985432211100 0 00000 00011
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.. .....+..+.+++.+||+.+|++|||+++++++|+
T Consensus 231 ~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 231 LK---DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred Cc---cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 11 11123457889999999999999999999998863
No 147
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.6e-41 Score=304.67 Aligned_cols=255 Identities=30% Similarity=0.452 Sum_probs=207.7
Q ss_pred hcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.++|++.+.||+|+||.||+|...++..||+|.+.... .....+.+|+.++++++|+|++++++++......+++|||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 46788899999999999999998788899999986432 3346789999999999999999999999988899999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++..+......
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence 99999999997665567899999999999999999999998 999999999999999999999999999876543322
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
......++..|+|||.+.+..++.++||||||++++||++ |+.||...... .... ....+. ..
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~-~~~~~~-------~~-- 223 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR------EVLE-QVERGY-------RM-- 223 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHH-HHHcCC-------CC--
Confidence 2223345678999999998899999999999999999999 88887543211 1111 111110 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 224 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 -PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0111224568899999999999999999999998863
No 148
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.1e-41 Score=316.79 Aligned_cols=246 Identities=22% Similarity=0.284 Sum_probs=191.1
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHH-HHHcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVR-MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|+.. +++.||+|++..... ......+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999865 578899999864321 222334445544 56778999999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+.+.....++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++....... ...
T Consensus 81 ~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-~~~ 154 (325)
T cd05602 81 GELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-TTS 154 (325)
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-Ccc
Confidence 999998854 345788888899999999999999998 99999999999999999999999999975432221 223
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ ... . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~-~~~--------~---~~ 216 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNILN-KPL--------Q---LK 216 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH------HHHHHHHh-CCc--------C---CC
Confidence 467999999999999999999999999999999999999998643221 11111111 110 0 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHH----HHHHHhhc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPMS----EIVAMLTC 357 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~~----ev~~~l~~ 357 (407)
...+..+.+++.+||+.||.+||++. ++.++.+.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~ 254 (325)
T cd05602 217 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFF 254 (325)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCccc
Confidence 12345678999999999999999876 55555543
No 149
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.4e-41 Score=315.00 Aligned_cols=246 Identities=24% Similarity=0.319 Sum_probs=194.9
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... +++.||+|.+.... .......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999865 57899999986542 123344566788888764 899999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++........ ...
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 154 (316)
T cd05619 81 GDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-KTC 154 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-cee
Confidence 999998853 345899999999999999999999998 99999999999999999999999999975432221 123
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ........+. +. .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-------~~~~~i~~~~------~~-----~~ 216 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-------ELFQSIRMDN------PC-----YP 216 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCC------CC-----CC
Confidence 457899999999999999999999999999999999999998643221 1111111111 11 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHH-HHHHHhhc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPMS-EIVAMLTC 357 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~~-ev~~~l~~ 357 (407)
......+.+++.+||+.||++||++. ++.+|.+.
T Consensus 217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~ 251 (316)
T cd05619 217 RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFF 251 (316)
T ss_pred ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCccc
Confidence 12334578999999999999999997 77776553
No 150
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.3e-41 Score=308.48 Aligned_cols=255 Identities=25% Similarity=0.316 Sum_probs=203.4
Q ss_pred CCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 84 FHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
|+..+.||+|+||+||+|.. .+++.||+|.+..... ......+.+|+++++.++|+|++++.+++..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678899999999999986 4689999999854332 22334578899999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|..++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 99999998887655556999999999999999999999988 99999999999999999999999999976543322
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....|+..|+|||.+.+..++.++|+||||+++|||++|+.||........ ............ ..
T Consensus 158 -~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~---~~~~~~~~~~~~------~~---- 223 (285)
T cd05632 158 -IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK---REEVDRRVLETE------EV---- 223 (285)
T ss_pred -ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhhhccc------cc----
Confidence 1345689999999999988999999999999999999999999864322110 001111111100 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~ 357 (407)
........+.+++..||+.||++||+ +.+++.+-+.
T Consensus 224 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05632 224 -YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF 264 (285)
T ss_pred -cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence 11223445789999999999999999 7788887654
No 151
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8.1e-41 Score=309.16 Aligned_cols=257 Identities=28% Similarity=0.473 Sum_probs=205.4
Q ss_pred cCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
.+|.+.+.||+|+||.||+|... ++..+++|.+.. ........+.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC-ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 45777789999999999999742 355689998753 23344467889999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC
Q 040557 156 LVYEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF 221 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~ 221 (407)
+||||+++++|.+++.... ...+++..+..++.|++.|+.|||+.+ ++||||||+||++++++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCC
Confidence 9999999999999986432 234899999999999999999999998 99999999999999999
Q ss_pred ceEEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHH
Q 040557 222 QSKIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 222 ~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~ 299 (407)
.++|+|||++......... ......++..|+|||.+.+..++.++||||||+++|||+| |+.|+.......
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------- 233 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE------- 233 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 9999999999865443221 1233456788999999999999999999999999999999 898876433211
Q ss_pred HHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 300 AWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 300 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.......+.... .....+..+.+++.+||+.+|++||++.+|++.|....
T Consensus 234 ~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 234 VIECITQGRVLE----------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred HHHHHhCCCCCC----------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 112222222111 11123456889999999999999999999999998653
No 152
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.2e-41 Score=329.80 Aligned_cols=251 Identities=21% Similarity=0.290 Sum_probs=202.2
Q ss_pred CCCCCCeeeccCCccEEEEEec-C-CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-D-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.|.+.+.||+|+||.||+|... + +..||+|.+... .......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3778889999999999999753 3 677888876433 344455678899999999999999999999999999999999
Q ss_pred ccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 161 MKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 161 ~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999887542 3446889999999999999999999988 9999999999999999999999999998765433
Q ss_pred cc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 239 AY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 239 ~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......... +... +
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~------~~~~~~~~~-~~~~----~-- 290 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ------REIMQQVLY-GKYD----P-- 290 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-CCCC----C--
Confidence 21 23345799999999999999999999999999999999999999864321 111111111 1110 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
.+...+..+.+++.+||+.||++||++.+++.+
T Consensus 291 ----~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 291 ----FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ----CCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 111234568899999999999999999999865
No 153
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.6e-41 Score=307.10 Aligned_cols=245 Identities=25% Similarity=0.324 Sum_probs=194.0
Q ss_pred eeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
||+|+||.||+++.. +|+.||+|.+..... ......+..|++++.+++||||+++.+++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999864 589999999854321 12234556799999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
..++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........ .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT--ITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCce--eeccC
Confidence 98887656666899999999999999999999988 99999999999999999999999999987654322 23356
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
|+..|+|||++.+..++.++|||||||++|||++|+.||........ ......... ...+. .. ....
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~-----~~~~~--~~----~~~~ 222 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTL-----EDEVK--FE----HQNF 222 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhh-----ccccc--cc----cccC
Confidence 89999999999998899999999999999999999999864322110 001111111 10110 00 0123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHH
Q 040557 327 ALQVINVAFICLQPHGNQRPPMSEIV 352 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs~~ev~ 352 (407)
+.++.+++..||+.||++||++.|++
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccch
Confidence 45688999999999999999996554
No 154
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.3e-40 Score=303.72 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=208.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|... +|+.||+|.+.... .......+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999875 79999999885422 2334567889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 159 EYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 159 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
||+++|+|..++... ....+++..+..++.+++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999888542 2455899999999999999999999998 99999999999999999999999999986654
Q ss_pred CCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
.... .....++..|+|||.+.+..++.++||||||+++|+|++|+.|+...... .... ......+..
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~-~~~~~~~~~------- 225 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSL-CKKIEKCDY------- 225 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHH-HhhhhcCCC-------
Confidence 3321 22346888999999999888999999999999999999999998543211 0111 111111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
........+..+.+++.+||+.+|++|||+.+|+++|...
T Consensus 226 --~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 226 --PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred --CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 0001113455788999999999999999999999998754
No 155
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.1e-41 Score=312.03 Aligned_cols=258 Identities=27% Similarity=0.380 Sum_probs=202.7
Q ss_pred cCCCCCCeeeccCCccEEEEEecC-C--cEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD-G--TLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 157 (407)
++|++.+.||+|+||.||+|...+ + ..+++|.++..........+.+|+++++++ +||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 568888999999999999998643 3 347888876444445566789999999999 799999999999999999999
Q ss_pred EEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCce
Q 040557 158 YEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS 223 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~ 223 (407)
+||+++|+|.+++.... ...+++..+..++.|++.|++|||+.+ ++||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999986432 135889999999999999999999988 9999999999999999999
Q ss_pred EEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHH
Q 040557 224 KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWK 302 (407)
Q Consensus 224 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 302 (407)
||+|||++....... .......+..|+|||.+.+..++.++|||||||++|||++ |..||....... ...
T Consensus 159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-------~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-------LYE 229 (297)
T ss_pred EECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHH
Confidence 999999986432211 1111223557999999998899999999999999999998 988886433211 111
Q ss_pred HHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 303 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
....+. ... .+...+..+.+++.+||+.+|.+|||+.++++.|......
T Consensus 230 ~~~~~~-----~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 230 KLPQGY-----RME-----KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHhcCC-----CCC-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111110 000 1122345688999999999999999999999998765543
No 156
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.1e-41 Score=312.86 Aligned_cols=259 Identities=29% Similarity=0.423 Sum_probs=205.8
Q ss_pred hcCCCCCCeeeccCCccEEEEEec--------CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecC
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA--------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDG 151 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 151 (407)
.++|.+.+.||+|+||.||++... ++..+|+|.+...........+.+|++++..+ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 367889999999999999999742 23579999987554445566788999999999 799999999999999
Q ss_pred CeeEEEEEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEE
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL 217 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill 217 (407)
+..++||||+++|+|.+++.... ...+++..+.+++.|++.||+|||+.+ ++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 99999999999999999996532 135889999999999999999999988 9999999999999
Q ss_pred cCCCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCc
Q 040557 218 DEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQY 295 (407)
Q Consensus 218 ~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~ 295 (407)
+.++.++|+|||++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..|+.....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~----- 248 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 248 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----
Confidence 999999999999998664322211 122234568999999998889999999999999999998 7777753221
Q ss_pred hhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 296 LPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.........+... ..+...+..+.+++.+||+.+|++|||+.++++.|..+.
T Consensus 249 --~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 249 --EELFKLLKEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred --HHHHHHHHcCCCC----------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 1122222222111 112223457889999999999999999999999997654
No 157
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=8.5e-41 Score=307.24 Aligned_cols=258 Identities=27% Similarity=0.387 Sum_probs=207.6
Q ss_pred hcCCCCCCeeeccCCccEEEEEecC-----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeec-CCee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLAD-----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD-GSQR 154 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 154 (407)
.++|++.+.||+|+||.||+|...+ +..|++|.+...........+.+|+.++++++|+||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678888999999999999998755 788999998655555667788999999999999999999998765 4678
Q ss_pred EEEEEeccCCChhHHHhccCC------CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecc
Q 040557 155 LLVYEYMKNRSLDLLIYGESD------KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDF 228 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 228 (407)
++++||+.+|+|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999865322 45899999999999999999999988 999999999999999999999999
Q ss_pred cCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHh
Q 040557 229 GLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYER 306 (407)
Q Consensus 229 gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 306 (407)
|+++.+...... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||....+.+ .......
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~ 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-------MAAYLKD 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHc
Confidence 999866433221 1223346778999999988899999999999999999999 999886432211 1111221
Q ss_pred CccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 307 GRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 307 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+. ... .....+..+.+++.+||+.||++|||+.++++.|...
T Consensus 235 ~~-------~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 235 GY-------RLA---QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CC-------CCC---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11 000 1112345688999999999999999999999999754
No 158
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.9e-40 Score=303.58 Aligned_cols=254 Identities=25% Similarity=0.438 Sum_probs=200.3
Q ss_pred CCCCCeeeccCCccEEEEEecC----CcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCe-----
Q 040557 84 FHPGNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ----- 153 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 153 (407)
|++++.||+|+||.||+|.... +..||+|.+.... .......+.+|++.++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998642 3679999986543 33445678999999999999999999998865544
Q ss_pred -eEEEEEeccCCChhHHHhcc----CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecc
Q 040557 154 -RLLVYEYMKNRSLDLLIYGE----SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDF 228 (407)
Q Consensus 154 -~~lv~e~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 228 (407)
.++++||+++|+|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 79999999999999888543 2346899999999999999999999988 999999999999999999999999
Q ss_pred cCccccCCCCcccc-cccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHh
Q 040557 229 GLARFFPEDQAYLS-TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYER 306 (407)
Q Consensus 229 gla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 306 (407)
|+++.......... ....++..|+|||.+.+..++.++|||||||++|||++ |..|+...... .. ......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~------~~-~~~~~~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH------EI-YDYLRH 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH------HH-HHHHHc
Confidence 99987654332211 12335678999999988899999999999999999999 77777542211 11 111111
Q ss_pred CccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 307 GRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 307 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
+... ..+...+..+.+++.+||+.||++|||+.++++.|..
T Consensus 231 ~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 231 GNRL----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred CCCC----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 1111 1122345578999999999999999999999999875
No 159
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.1e-41 Score=309.97 Aligned_cols=261 Identities=26% Similarity=0.422 Sum_probs=199.7
Q ss_pred cCCCCCCeeeccCCccEEEEEe-----cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeec--CCee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD--GSQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 154 (407)
++|++.+.||+|+||.||++.. .++..||+|.+... .......+.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 4677889999999999999974 35889999998533 34455678999999999999999999998743 3467
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++...
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 89999999999999986432 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCccc--ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC---------chhHHHHHH
Q 040557 235 PEDQAYL--STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ---------YLPEYAWKL 303 (407)
Q Consensus 235 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~---------~~~~~~~~~ 303 (407)
....... .....++..|+|||.+.+..++.++||||||+++|||++|..++......... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence 5433221 11223445699999999889999999999999999999987765322110000 000000111
Q ss_pred HHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 304 YERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 304 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
...+ .. .......+..+.+++.+||+.+|++|||+.+|++.|+.
T Consensus 239 ~~~~---------~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 239 LKNN---------GR-LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred HhcC---------Cc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 1111 00 00112234568999999999999999999999999874
No 160
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.4e-41 Score=312.08 Aligned_cols=255 Identities=24% Similarity=0.391 Sum_probs=200.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCc--EEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGT--LVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 157 (407)
++|++.+.||+|+||.||+|.+. ++. .+|+|.+...........+.+|++++.++ +|+||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 56788899999999999999864 454 46788775444455567888999999999 899999999999999999999
Q ss_pred EEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCce
Q 040557 158 YEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS 223 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~ 223 (407)
|||+++|+|.+++.... ...+++..+..++.|++.|++|||+.+ ++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 99999999999986432 235789999999999999999999988 9999999999999999999
Q ss_pred EEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHH
Q 040557 224 KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWK 302 (407)
Q Consensus 224 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 302 (407)
+|+|||++....... ......++..|+|||.+.+..++.++|||||||++|||+| |..||...... . ...
T Consensus 164 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~-~~~ 234 (303)
T cd05088 164 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------E-LYE 234 (303)
T ss_pred EeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH------H-HHH
Confidence 999999986432111 1111234667999999988889999999999999999998 89888543221 1 111
Q ss_pred HHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 303 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
....+. .. ..+...+..+.+++.+||+.+|++||++.+++++|+..
T Consensus 235 ~~~~~~-------~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 235 KLPQGY-------RL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHhcCC-------cC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111110 00 01112345688999999999999999999999998754
No 161
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.2e-41 Score=308.03 Aligned_cols=263 Identities=24% Similarity=0.409 Sum_probs=204.2
Q ss_pred cCCCCCCeeeccCCccEEEEEe-----cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--Cee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 154 (407)
+.|++.+.||+|+||.||.++. .++..||+|.+...........+.+|+++++.++|+|++++.+++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467788999999999999974 357889999986554455567899999999999999999999998765 568
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 89999999999999985432 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCcc--cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCc--------ccCchhHHHHHHH
Q 040557 235 PEDQAY--LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS--------EMQYLPEYAWKLY 304 (407)
Q Consensus 235 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~ 304 (407)
...... ......++..|+|||.+.+..++.++||||||+++|||+|++.|....... .............
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 543321 112345677899999998889999999999999999999987664322110 0010111111111
Q ss_pred HhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 305 ERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 305 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+... ......+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 240 ~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRL----------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccC----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111100 01122346799999999999999999999999998753
No 162
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.2e-41 Score=310.73 Aligned_cols=261 Identities=28% Similarity=0.422 Sum_probs=207.3
Q ss_pred hcCCCCCCeeeccCCccEEEEEe--------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecC
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL--------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDG 151 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 151 (407)
.++|++.+.||+|+||.||+|+. .++..||+|.+...........+.+|+.++..+ +|+||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 46788889999999999999963 134579999886544455567889999999999 899999999999999
Q ss_pred CeeEEEEEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEE
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL 217 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill 217 (407)
...+++|||+.+|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 99999999999999999986532 235788999999999999999999998 9999999999999
Q ss_pred cCCCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCc
Q 040557 218 DEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQY 295 (407)
Q Consensus 218 ~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~ 295 (407)
++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----- 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----
Confidence 999999999999998765433221 223346678999999988889999999999999999998 6666643221
Q ss_pred hhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 296 LPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
.........+... ..+...+..+.+++.+||+.+|++|||+.++++.|..+...
T Consensus 246 --~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 --EELFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred --HHHHHHHHcCCcC----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1122222222111 01122345688999999999999999999999999765443
No 163
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.7e-41 Score=308.47 Aligned_cols=259 Identities=29% Similarity=0.423 Sum_probs=204.1
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCe
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 153 (407)
..++|++.+.||+|+||.||+|... .+..||+|.+...........+.+|+.+++.++|+||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4577889999999999999999643 2458999988655444455678899999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHHhccC--------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEE
Q 040557 154 RLLVYEYMKNRSLDLLIYGES--------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKI 225 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl 225 (407)
.++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 999999999999999986422 234567888999999999999999988 999999999999999999999
Q ss_pred ecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHH
Q 040557 226 GDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKL 303 (407)
Q Consensus 226 ~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 303 (407)
+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..|+...... ... ..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~------~~~-~~ 233 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVL-KF 233 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHH-HH
Confidence 9999998654332211 122345678999999999999999999999999999999 67777532211 111 11
Q ss_pred HHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 304 YERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 304 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
...+.... .+...+..+.+++.+||+.||++|||+.++++.|...
T Consensus 234 ~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 234 VMDGGYLD----------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHcCCCCC----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 11111110 1112345789999999999999999999999998754
No 164
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-40 Score=301.15 Aligned_cols=247 Identities=24% Similarity=0.403 Sum_probs=196.8
Q ss_pred eeeccCCccEEEEEec---CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCC
Q 040557 89 LLGRGGFGPVYRGKLA---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
.||+|+||.||+|.+. ++..||+|.+.........+.+.+|+.++++++|+||+++++++.. ...++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999753 3567999998655455556779999999999999999999999864 56799999999999
Q ss_pred hhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc--c
Q 040557 166 LDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--T 243 (407)
Q Consensus 166 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~--~ 243 (407)
|.+++... ...+++..+.+++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........... .
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 99988643 345899999999999999999999988 99999999999999999999999999986644332211 1
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
...++..|+|||.+.+..++.++||||||+++||+++ |..||...... ........+... ..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~----------~~ 219 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-------EVMSFIEQGKRL----------DC 219 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-------HHHHHHHCCCCC----------CC
Confidence 2234578999999988889999999999999999996 99888643221 112222222111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 323 VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
+...+..+.+++.+||+.+|++||++.+|.+.|..
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 12235678899999999999999999999998863
No 165
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=7.9e-41 Score=316.23 Aligned_cols=260 Identities=28% Similarity=0.427 Sum_probs=202.5
Q ss_pred hcCCCCCCeeeccCCccEEEEEe------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecC-C
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDG-S 152 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 152 (407)
.++|++.+.||+|+||.||+|.. .+++.||||++...........+.+|+.++.++ +|+||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788999999999999999963 357889999997554455566788999999999 789999999988654 4
Q ss_pred eeEEEEEeccCCChhHHHhccC----------------------------------------------------------
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES---------------------------------------------------------- 174 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 174 (407)
..+++|||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999886421
Q ss_pred -------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc-ccccc
Q 040557 175 -------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-STNFA 246 (407)
Q Consensus 175 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~ 246 (407)
...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.......... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 123678888999999999999999998 9999999999999999999999999998654332211 12234
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVER 325 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 325 (407)
++..|+|||.+.+..++.++||||||+++|||++ |..|+...... .........+.... .+..
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~----------~~~~ 306 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTRMR----------APDY 306 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc------HHHHHHHhccCCCC----------CCCC
Confidence 5678999999999999999999999999999997 88887542211 11111122111110 0111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 326 DALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 326 ~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.+..+.+++..||+.+|++|||+.+|+++|+...
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 2345889999999999999999999999997653
No 166
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.2e-40 Score=307.07 Aligned_cols=262 Identities=24% Similarity=0.413 Sum_probs=202.1
Q ss_pred cCCCCCCeeeccCCccEEEEEec-----------------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-----------------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 144 (407)
++|++.+.||+|+||.||++... ++..+|+|.+...........+.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998532 2446999998655455556789999999999999999999
Q ss_pred eeeeecCCeeEEEEEeccCCChhHHHhccC---------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccE
Q 040557 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGES---------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNV 215 (407)
Q Consensus 145 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Ni 215 (407)
++++...+..+++|||+++|+|.+++.... ...+++..+..++.|++.|+.|||+.+ ++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 999999999999999999999999986432 124778899999999999999999998 99999999999
Q ss_pred EEcCCCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh--cCCCCCCCCCcc
Q 040557 216 LLDEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSE 292 (407)
Q Consensus 216 ll~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t--g~~p~~~~~~~~ 292 (407)
++++++.++|+|||++..+....... .....++..|++||...++.++.++|||||||++|||++ |..|+......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999998654332211 122345678999999888899999999999999999998 556665332211
Q ss_pred cCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 293 MQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. ................. + .+..++..+.+++.+||+.||++||++.+|++.|.
T Consensus 242 ~---~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 242 V---IENTGEFFRDQGRQVYL-P------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred H---HHHHHHHHhhccccccC-C------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 00011111111000000 0 11123467889999999999999999999999885
No 167
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-40 Score=307.38 Aligned_cols=257 Identities=28% Similarity=0.470 Sum_probs=204.8
Q ss_pred cCCCCCCeeeccCCccEEEEEe------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
.+|.+.+.||+|+||.||++.. .++..+|+|.+... .......+.+|++++.+++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 5678889999999999999974 23456899988533 3444567899999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccC-----------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceE
Q 040557 156 LVYEYMKNRSLDLLIYGES-----------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSK 224 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~k 224 (407)
+||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999999986432 234899999999999999999999988 99999999999999999999
Q ss_pred EecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHH
Q 040557 225 IGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWK 302 (407)
Q Consensus 225 l~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 302 (407)
|+|||++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||...... . ...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~------~-~~~ 233 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------E-VIE 233 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHH
Confidence 9999999865433221 1223345778999999998899999999999999999999 88887543321 1 111
Q ss_pred HHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 303 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
....+.... . ....+..+.+++.+||+.||.+|||+.++++.|+...
T Consensus 234 ~i~~~~~~~-----~-----~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 234 CITQGRVLQ-----R-----PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HHHcCCcCC-----C-----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 222222111 0 1112346899999999999999999999999987654
No 168
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=8.8e-41 Score=304.87 Aligned_cols=259 Identities=23% Similarity=0.403 Sum_probs=207.3
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|.. .+|+.+|||.+.... ......++.+|+.+++.++|+||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677788999999999999985 579999999875432 2334467889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 159 EYMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 159 e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
||+++++|.+++.. .....+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998853 22456899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
.... .....++..|+|||.+.+..++.++||||||+++|||++|..|+........ .. ...... ...+.
T Consensus 159 ~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~-~~~~~~-----~~~~~ 227 (267)
T cd08229 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY----SL-CKKIEQ-----CDYPP 227 (267)
T ss_pred CCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH----HH-hhhhhc-----CCCCC
Confidence 3321 2235688999999999888899999999999999999999999864322110 11 111111 11111
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. .....+..+.+++.+||+.||++|||+.+|++.+...
T Consensus 228 ~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 228 L----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred C----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1 1123455788999999999999999999999988643
No 169
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.1e-41 Score=308.75 Aligned_cols=256 Identities=28% Similarity=0.401 Sum_probs=201.7
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecC-----
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDG----- 151 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----- 151 (407)
.+.+.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 34567888889999999999999864 58899999985432 3345788999999998 799999999998653
Q ss_pred -CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccC
Q 040557 152 -SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGL 230 (407)
Q Consensus 152 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 230 (407)
...+++|||+.+++|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence 45789999999999999987655566899999999999999999999988 99999999999999999999999999
Q ss_pred ccccCCCCcccccccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH
Q 040557 231 ARFFPEDQAYLSTNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE 305 (407)
Q Consensus 231 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 305 (407)
+........ ......|+..|+|||++. +..++.++|||||||++|||++|+.|+....+.. ......
T Consensus 158 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-------~~~~~~ 229 (272)
T cd06637 158 SAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-------ALFLIP 229 (272)
T ss_pred ceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH-------HHHHHh
Confidence 986543222 223456899999999886 3467889999999999999999999986432211 000111
Q ss_pred hCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 306 RGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 306 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
... ..... ....+..+.+++.+||+.+|++|||+.+++++-|
T Consensus 230 ~~~-----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 230 RNP-----APRLK----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred cCC-----CCCCC----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 110 01111 1123456889999999999999999999998754
No 170
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.6e-40 Score=303.34 Aligned_cols=256 Identities=28% Similarity=0.453 Sum_probs=204.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CC---cEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DG---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
++|+..+.||+|+||.||+|... ++ ..+|+|.+...........+.+|++++.+++|+|++++.+++.+.+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46777889999999999999864 23 379999886554455567789999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++++|.+++.... ..+++..+..++.|++.|++|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 85 TEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999986433 45899999999999999999999988 999999999999999999999999999866533
Q ss_pred Cccccc--ccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 238 QAYLST--NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 238 ~~~~~~--~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
...... ....+..|+|||.+.+..++.++|||||||++|||++ |+.|+...... ... .....+.
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~~~-~~i~~~~------ 227 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------EVM-KAINDGF------ 227 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHH-HHHhcCC------
Confidence 221111 1223457999999998889999999999999999998 99998543221 111 1111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. .......+..+.+++.+||+.+|++||++.+|++.|...
T Consensus 228 ---~-~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 ---R-LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---C-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 001122345688999999999999999999999998653
No 171
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.6e-41 Score=314.56 Aligned_cols=247 Identities=22% Similarity=0.283 Sum_probs=193.3
Q ss_pred CeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHH-HHHcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVR-MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|+. .+|+.||+|++.... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999985 468999999986432 2223345556655 46778999999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++........ ...
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~~~ 154 (325)
T cd05604 81 GELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD-TTT 154 (325)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-Ccc
Confidence 999888743 346899999999999999999999998 99999999999999999999999999975432221 123
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ....... .+.. .+ .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~~~-~~~~------~~-----~ 216 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA------EMYDNIL-HKPL------VL-----R 216 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH------HHHHHHH-cCCc------cC-----C
Confidence 457999999999999999999999999999999999999998643221 1111111 1110 01 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHH----HHHHHhhcc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPMS----EIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~~----ev~~~l~~~ 358 (407)
......+.+++.+|++.+|++||++. ++++|.+..
T Consensus 217 ~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~ 255 (325)
T cd05604 217 PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFE 255 (325)
T ss_pred CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcC
Confidence 11234577899999999999999874 777765543
No 172
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.7e-40 Score=303.86 Aligned_cols=254 Identities=24% Similarity=0.398 Sum_probs=197.8
Q ss_pred CCCCCeeeccCCccEEEEEecC-Cc--EEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC------Ce
Q 040557 84 FHPGNLLGRGGFGPVYRGKLAD-GT--LVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG------SQ 153 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 153 (407)
|.+++.||+|+||.||+|...+ +. .+|+|.+.... .......+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999998654 32 68999886542 334456788999999999999999999987432 24
Q ss_pred eEEEEEeccCCChhHHHhcc----CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEeccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGE----SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
.+++|||+++|+|..++... ....+++.....++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 68999999999998887422 2345899999999999999999999988 9999999999999999999999999
Q ss_pred CccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhC
Q 040557 230 LARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERG 307 (407)
Q Consensus 230 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 307 (407)
+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-------SEIYDYLRQG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcC
Confidence 998765433221 122346678999999999999999999999999999999 7777754221 1122222222
Q ss_pred ccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 308 RILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 308 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.... .....+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 231 ~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 231 NRLK----------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 2110 111234568899999999999999999999999864
No 173
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.7e-40 Score=303.11 Aligned_cols=255 Identities=26% Similarity=0.440 Sum_probs=204.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-C---CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-D---GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
.+|++.+.||+|+||.||+|... + +..+|+|.+...........+.+|+.++.+++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778899999999999999753 2 3479999986554455567889999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++++|.+++.... ..+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.++|+|||++......
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999986443 45899999999999999999999998 999999999999999999999999999876543
Q ss_pred Ccccc--cccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 238 QAYLS--TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 238 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
..... ....++..|+|||.+.+..++.++||||||+++||+++ |..||......+ .......+..
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-------~~~~~~~~~~----- 227 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-------VIKAIEEGYR----- 227 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-------HHHHHhCCCc-----
Confidence 32211 12223568999999998899999999999999999886 998886432211 1111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
. ......+..+.+++.+||+.+|++||++.++++.|..
T Consensus 228 --~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 228 --L---PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred --C---CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 0 0111234568899999999999999999999999864
No 174
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.8e-40 Score=300.48 Aligned_cols=254 Identities=26% Similarity=0.413 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.++|++.+.||+|+||.||+|...++..+|+|.+... ......+.+|+++++.++|+||+++.+++.. ...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 3678888999999999999999877888999987532 3345678899999999999999999999887 778999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 99999999997655566899999999999999999999988 999999999999999999999999999876543332
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
......++..|+|||.+....++.++|+||||+++|+++| |+.||....... .......+...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~~~--------- 222 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALERGYRM--------- 222 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhCCCCC---------
Confidence 2233345678999999998889999999999999999999 888876432211 11111111110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
......+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 223 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 -PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0112234568899999999999999999999999863
No 175
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.2e-40 Score=300.82 Aligned_cols=252 Identities=27% Similarity=0.388 Sum_probs=193.2
Q ss_pred eeeccCCccEEEEEecC---CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCC
Q 040557 89 LLGRGGFGPVYRGKLAD---GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
.||+|+||.||+|...+ +..+|+|.+...........+.+|+.+++.++|+||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999997543 457999988655544555678999999999999999999999999999999999999999
Q ss_pred hhHHHhccC---CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc-
Q 040557 166 LDLLIYGES---DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL- 241 (407)
Q Consensus 166 L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~- 241 (407)
|.+++.... ....++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999986432 234677888899999999999999998 9999999999999999999999999997554333221
Q ss_pred ccccccCccccCccccccC-------CCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 242 STNFAGTLGYTAPEYAIRG-------ELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~-------~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
.....++..|+|||.+.+. .++.++||||||+++|||++ |+.||......+ .......+......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~ 231 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-------VLTYTVREQQLKLP 231 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-------HHHHHhhcccCCCC
Confidence 1234577889999988642 35789999999999999996 998886432211 11111111111122
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
++.+.. .....+.+++..|| .+|++|||+++|+..|+
T Consensus 232 ~~~~~~-----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRLKL-----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCccCC-----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 222211 12345778999999 58999999999998875
No 176
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7.4e-41 Score=303.74 Aligned_cols=246 Identities=28% Similarity=0.434 Sum_probs=196.1
Q ss_pred eeeccCCccEEEEEe---cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 89 LLGRGGFGPVYRGKL---ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
.||+|+||.||+|.+ .++..+|+|++.... .......+.+|+.+++.++|+||+++++++.. ...++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999964 357889999986443 23345678999999999999999999999854 5678999999999
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc--c
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL--S 242 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~ 242 (407)
+|.+++... ..+++..+..++.|++.|+.|||+.+ ++||||||.||++++++.++|+|||++.......... .
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999998533 45899999999999999999999988 9999999999999999999999999998765443221 1
Q ss_pred cccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
....++..|+|||.+....++.++||||||+++|||++ |+.||...... . .......+....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~-~~~~i~~~~~~~---------- 218 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN------E-VTQMIESGERME---------- 218 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHCCCCCC----------
Confidence 22234578999999988889999999999999999998 89888643221 1 112222221110
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.+...+.++.+++.+||+.||++||++.+|.+.|..
T Consensus 219 ~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 219 CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 112234568899999999999999999999999864
No 177
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.2e-41 Score=315.68 Aligned_cols=271 Identities=23% Similarity=0.358 Sum_probs=203.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|...+.||+|+||.||+|+.. +++.||+|.+...........+.+|++++++++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888899999999999999864 68889999986554444445678999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++ +|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.........
T Consensus 86 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 86 LDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred CCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 975 787777543 345889999999999999999999998 999999999999999999999999999765433221
Q ss_pred cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchh--------HHHHHHHHhCcccc
Q 040557 241 LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP--------EYAWKLYERGRILE 311 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 311 (407)
.....+++.|+|||.+.+ ..++.++|||||||++|||+||+.||......+..... ...+..+.......
T Consensus 161 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 161 -YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred -cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 223467899999998865 46899999999999999999999998654332110000 00000000000000
Q ss_pred ccC-cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 312 LVD-PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 312 ~~d-~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+ +..... ......+..+.+++.+||+.||++|||+.|+++|.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~ 290 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR 290 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence 000 000000 00011245678999999999999999999999998764
No 178
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=9.9e-41 Score=302.67 Aligned_cols=249 Identities=31% Similarity=0.466 Sum_probs=205.3
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|++.+.||+|+||.||+|... |+.||+|.+..... ...++.+|+.++..++|+||+++++++.+.+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 56788899999999999999874 88999999864432 5667899999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++++|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999999997665557999999999999999999999998 99999999999999999999999999987633221
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
...++..|+|||.+....++.++||||||+++|||++ |+.||...... ........+...
T Consensus 158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~---------- 218 (256)
T cd05039 158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-------DVVPHVEKGYRM---------- 218 (256)
T ss_pred --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHhcCCCC----------
Confidence 2335668999999988899999999999999999997 88887543211 111122211100
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.+|++||++.+++++|..
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0112234668899999999999999999999999864
No 179
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.8e-41 Score=308.35 Aligned_cols=265 Identities=25% Similarity=0.364 Sum_probs=196.4
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChh-hHHHHHHHHHHHHcC---CCCceeeeeeeeec-----CC
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSI---QHKNLVRLLGCCSD-----GS 152 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~ 152 (407)
+|++.+.||+|+||.||+|... +|+.||+|.+....... ....+.+|++++..+ +|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778889999999999999864 68999999986543222 223455677776655 79999999998754 34
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..+++|||+.+ +|..++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 57899999975 8888886555556899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC---cc
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG---RI 309 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 309 (407)
....... .....||..|+|||.+.+..++.++|||||||++|||++|++||........ +.. ........ ..
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~-~~~~~~~~~~~~~ 231 (288)
T cd07863 157 IYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGK-IFDLIGLPPEDDW 231 (288)
T ss_pred cccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHH-HHHHhCCCChhhC
Confidence 7653322 2345689999999999999999999999999999999999999864432110 000 00000000 00
Q ss_pred -------ccccCccccc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 310 -------LELVDPRMRK--EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 310 -------~~~~d~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+.... ..........+.+++.+||+.||++|||+.|++.|.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 0000000000 0011123456789999999999999999999998765
No 180
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7.6e-41 Score=313.71 Aligned_cols=251 Identities=23% Similarity=0.298 Sum_probs=198.8
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 158 (407)
+|+..+.||+|+||.||+|... +|+.||+|++.... .......+..|.+++..+. |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3666789999999999999854 68999999986432 2233456778999988885 577888999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 99999999998853 345899999999999999999999998 9999999999999999999999999997543322
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ....... .+..
T Consensus 156 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~i~-~~~~--------- 218 (323)
T cd05615 156 V-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED------ELFQSIM-EHNV--------- 218 (323)
T ss_pred c-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHH-hCCC---------
Confidence 1 123456899999999999999999999999999999999999998754321 1111111 1111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTC 357 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~ 357 (407)
..+...+..+.+++.+||+.+|++|++ ..++.+|-+.
T Consensus 219 --~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f 260 (323)
T cd05615 219 --SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFF 260 (323)
T ss_pred --CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCccc
Confidence 011223456789999999999999997 4677777554
No 181
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-40 Score=313.31 Aligned_cols=246 Identities=23% Similarity=0.276 Sum_probs=192.1
Q ss_pred eeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcC---CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSI---QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
||+|+||.||+|+.. +|+.||+|++..... ......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999864 589999999854321 12233455677776655 699999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|..++.. ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.++|+|||++........ ...
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~-~~~ 154 (330)
T cd05586 81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDNK-TTN 154 (330)
T ss_pred ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-Ccc
Confidence 999988853 345899999999999999999999998 99999999999999999999999999975433222 123
Q ss_pred ccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 244 NFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
...||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... ........+.. .+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-------~~~~~i~~~~~------~~~~--- 218 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-------QMYRNIAFGKV------RFPK--- 218 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-------HHHHHHHcCCC------CCCC---
Confidence 46799999999988764 5899999999999999999999998653221 11112221111 1111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC----CHHHHHHHhhcc
Q 040557 323 VERDALQVINVAFICLQPHGNQRP----PMSEIVAMLTCK 358 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RP----s~~ev~~~l~~~ 358 (407)
......+.+++.+||+.||++|| ++.++++|.+..
T Consensus 219 -~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~ 257 (330)
T cd05586 219 -NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFA 257 (330)
T ss_pred -ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcccc
Confidence 11234578999999999999998 689999887754
No 182
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-40 Score=307.45 Aligned_cols=260 Identities=22% Similarity=0.335 Sum_probs=207.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|++.+.||+|+||+||++... +|+.||+|.+...........+.+|+++++.++|+||+++++++...+.+++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45667788999999999999854 68899999886554455567899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
+++++|..++.. .+.+++.....++.+++.|+.|||+ .+ ++||||+|+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 85 MDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred CCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 999999988854 3458999999999999999999997 45 9999999999999999999999999987543222
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC-----chhHHHHHHHHhCccccccC
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ-----YLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d 314 (407)
.....|+..|+|||.+.+..++.++|||||||++|+|++|+.||......... ............. .
T Consensus 159 --~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 230 (284)
T cd06620 159 --ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------P 230 (284)
T ss_pred --cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------C
Confidence 12356899999999998889999999999999999999999999754432110 0111111111100 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+.+. ....+..+.+++.+||+.||++|||+.|++++.+...
T Consensus 231 ~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 231 PRLP----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CCCC----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 1111 1124456889999999999999999999999977643
No 183
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.7e-40 Score=306.57 Aligned_cols=256 Identities=28% Similarity=0.454 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 154 (407)
.++|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+.+++.++|+||+++++++.++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 357888899999999999999753 46789999987555555567799999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHHhccC--------------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeecccccc
Q 040557 155 LLVYEYMKNRSLDLLIYGES--------------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASN 214 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~N 214 (407)
+++|||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 99999999999999986322 124788899999999999999999988 9999999999
Q ss_pred EEEcCCCceEEecccCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcc
Q 040557 215 VLLDEKFQSKIGDFGLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSE 292 (407)
Q Consensus 215 ill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~ 292 (407)
|++++++.++|+|||++......... .......+..|+|||.+.+..++.++|||||||++|||++ |..|+......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 99999999999999999765433221 1122335667999999998899999999999999999998 77777532211
Q ss_pred cCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 293 MQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+ .......+.... .+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 240 -----~-~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 240 -----E-VIYYVRDGNVLS----------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred -----H-HHHHHhcCCCCC----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 1 112222222110 11223456899999999999999999999999885
No 184
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.4e-41 Score=317.89 Aligned_cols=257 Identities=21% Similarity=0.286 Sum_probs=200.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|+..+.||+|+||.||++... +++.||+|.+.... .......+.+|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36778899999999999999864 68999999986432 2234457788999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 99999999999853 345899999999999999999999998 9999999999999999999999999987543211
Q ss_pred c----------------------------------ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCC
Q 040557 239 A----------------------------------YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284 (407)
Q Consensus 239 ~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p 284 (407)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 001235799999999999999999999999999999999999999
Q ss_pred CCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHHhhcc
Q 040557 285 TDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRP---PMSEIVAMLTCK 358 (407)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP---s~~ev~~~l~~~ 358 (407)
|....+.. ....... ......+.+.. .....+.+++.+|+. ||.+|+ ++.++++|-++.
T Consensus 236 f~~~~~~~------~~~~i~~-~~~~~~~p~~~-------~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~ 297 (360)
T cd05627 236 FCSETPQE------TYRKVMN-WKETLVFPPEV-------PISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFE 297 (360)
T ss_pred CCCCCHHH------HHHHHHc-CCCceecCCCC-------CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCC
Confidence 97543321 1111111 00000011100 123456777777664 999998 488999997754
No 185
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.3e-41 Score=307.36 Aligned_cols=254 Identities=28% Similarity=0.447 Sum_probs=201.8
Q ss_pred cCCCCCCeeeccCCccEEEEEe------cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
.+|+..+.||+|+||.||++.. .++..+|+|.+.. ........+.+|+++++.++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc-CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 4577788999999999999963 2466899998753 34455668999999999999999999999999999999
Q ss_pred EEEEeccCCChhHHHhccCC-------------CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc
Q 040557 156 LVYEYMKNRSLDLLIYGESD-------------KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ 222 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~ 222 (407)
++|||+++|+|.+++..... ..+++..+..++.|++.|+.|||+.+ ++||||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCC
Confidence 99999999999999865331 35889999999999999999999988 999999999999999999
Q ss_pred eEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHH
Q 040557 223 SKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYA 300 (407)
Q Consensus 223 ~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~ 300 (407)
++|+|||++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~ 234 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------AI 234 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH------HH
Confidence 9999999997654332211 122345678999999999999999999999999999998 888875322211 11
Q ss_pred HHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 301 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+... ..+...+..+.+++.+||+.||++||++.+|++.|+
T Consensus 235 -~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 -ECITQGREL----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HHHHcCccC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111110 011123456889999999999999999999999885
No 186
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.2e-41 Score=306.33 Aligned_cols=256 Identities=29% Similarity=0.425 Sum_probs=201.0
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhH-HHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
|++.+.||+|+||+||+++.. +++.||+|.+......... ....+|+.++.+++|+||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 456689999999999999875 4678999999755433322 23456999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++++|.+++. ....+++..+..++.|+++||.+||+.+ ++|+||||+||++++++.++|+|||.+....... ..
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~-~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSENN-EN 154 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTSTT-SE
T ss_pred cccccccccc--cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-cc
Confidence 9999999996 3455899999999999999999999998 9999999999999999999999999998652222 22
Q ss_pred ccccccCccccCccccc-cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~-~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+. +..++.++||||+|+++|+|++|+.|+........ ......... .........
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~---~~~~~~~~~----~~~~~~~~~-- 225 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ---LEIIEKILK----RPLPSSSQQ-- 225 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH---HHHHHHHHH----THHHHHTTS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhh---hhhhhhccc----ccccccccc--
Confidence 34567899999999988 78899999999999999999999999875411100 011111110 000000000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.......+.+++.+||+.||++|||+.+++++-|
T Consensus 226 --~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~ 259 (260)
T PF00069_consen 226 --SREKSEELRDLIKKMLSKDPEQRPSAEELLKHPW 259 (260)
T ss_dssp --HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred --cchhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence 0001267899999999999999999999998865
No 187
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.6e-40 Score=316.24 Aligned_cols=269 Identities=24% Similarity=0.263 Sum_probs=200.3
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-----
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS----- 152 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 152 (407)
..++|++.+.||+|+||.||++... +|+.||+|.+.... .......+.+|+.+++.++|+||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999864 58999999986432 3344567889999999999999999999886443
Q ss_pred -eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 153 -QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 153 -~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
..++||||+++ +|...+. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCc
Confidence 46999999976 5555553 23788999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCccc---------C----c---
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEM---------Q----Y--- 295 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~---------~----~--- 295 (407)
+...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ . .
T Consensus 171 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 171 RTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred cccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 7654322 12345789999999999999999999999999999999999999975432100 0 0
Q ss_pred hhHHHHHHHHhCccc------cccCccc-cc-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 296 LPEYAWKLYERGRIL------ELVDPRM-RK-EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 296 ~~~~~~~~~~~~~~~------~~~d~~~-~~-~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
............... +...... .. ..........+.+++.+||+.||++|||+.|+++|.|..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 319 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence 000000000000000 0000000 00 000111235678999999999999999999999998754
No 188
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-40 Score=308.02 Aligned_cols=258 Identities=27% Similarity=0.429 Sum_probs=204.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec--------CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCC
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA--------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGS 152 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 152 (407)
.+|.+.+.||+|+||.||+|... .+..+|+|.+...........+.+|++++..+ +|+||+++++++.+..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56788899999999999999642 24579999986554555567789999999999 6999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~ 218 (407)
..+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 9999999999999999986432 245889999999999999999999988 99999999999999
Q ss_pred CCCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCch
Q 040557 219 EKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYL 296 (407)
Q Consensus 219 ~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~ 296 (407)
+++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------ 242 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV------ 242 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH------
Confidence 99999999999998665332211 112234567999999998899999999999999999999 7777753321
Q ss_pred hHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 297 PEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 297 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.........+.... .+...+..+.+++.+||+.+|++|||+.++++.|+...
T Consensus 243 -~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 243 -EELFKLLREGHRMD----------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred -HHHHHHHHcCCCCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11222222221110 11223456889999999999999999999999998654
No 189
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.5e-40 Score=301.63 Aligned_cols=260 Identities=25% Similarity=0.371 Sum_probs=209.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|++.+.||.|+||.||+|... ++..+|+|++...........+.+|++.++.++|+|++++++.+...+..+++||+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999854 68899999986555444667899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCC-CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGESD-KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
+++++|.+++..... ..+++.....++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999865433 56899999999999999999999988 99999999999999999999999999987654332
Q ss_pred c---cccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 240 Y---LSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 240 ~---~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
. ......|+..|+|||.+... .++.++|+||||+++|||++|+.|+....... ...+..... .+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~~------~~ 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLMLTLQND------PP 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHHHHhcCC------CC
Confidence 2 12334688999999998876 78999999999999999999999986443221 111111110 11
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
...........+..+.+++.+||+.||++||++.++++|-+
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence 11111111233466889999999999999999999998754
No 190
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=310.03 Aligned_cols=258 Identities=26% Similarity=0.305 Sum_probs=215.4
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh--hhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ--QGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 155 (407)
....|++++.||.|.||.||++... +|+.+|+|.+.+.... .....+.+|+.+|+++. ||||+.+.+.+++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4467888899999999999999865 4999999999765433 24468899999999998 999999999999999999
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC----CceEEecccCc
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK----FQSKIGDFGLA 231 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~----~~~kl~Dfgla 231 (407)
+|||++.||.|.+.+... .+++..+..++.|++.++.|||+.+ ++||||||+|+|+... +.++++|||++
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999988655 2999999999999999999999998 9999999999999643 57999999999
Q ss_pred cccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccc
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (407)
..... .......+||+.|+|||.+....|+..+||||+|+++|.|++|.+||........ ...+..+..
T Consensus 187 ~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-------~~~i~~~~~-- 255 (382)
T KOG0032|consen 187 KFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-------FLAILRGDF-- 255 (382)
T ss_pred eEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-------HHHHHcCCC--
Confidence 98877 3344678999999999999999999999999999999999999999986543221 112222222
Q ss_pred ccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 312 ~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
....+ .-......+-+++..|+..||.+|+|+.++++|.|-..
T Consensus 256 ----~f~~~-~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~ 298 (382)
T KOG0032|consen 256 ----DFTSE-PWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS 298 (382)
T ss_pred ----CCCCC-CccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence 11111 11234567889999999999999999999999998544
No 191
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.7e-40 Score=302.07 Aligned_cols=254 Identities=27% Similarity=0.472 Sum_probs=201.8
Q ss_pred CCCCCCeeeccCCccEEEEEecC-C---cEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLAD-G---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.|++.+.||+|+||.||+|.... + ..||+|.+...........|..|+.+++.++||||+++++++.++...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778899999999999998642 3 3699999865545556678999999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++|+|.+++... ...+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 999999999998644 345899999999999999999999988 9999999999999999999999999998664332
Q ss_pred cccc--cccc--cCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 239 AYLS--TNFA--GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 239 ~~~~--~~~~--gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
.... .... .+..|+|||.+.+..++.++|||||||++||+++ |..||...... . .........
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~------~-~~~~i~~~~----- 228 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ------D-VINAIEQDY----- 228 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH------H-HHHHHHcCC-----
Confidence 2111 1111 2457999999999999999999999999999886 88888643221 1 111111110
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.. ..+...+..+.+++.+||+.+|++||++.+++..|+.
T Consensus 229 --~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 229 --RL---PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred --cC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 00 0112234568899999999999999999999999864
No 192
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-40 Score=302.18 Aligned_cols=249 Identities=29% Similarity=0.433 Sum_probs=199.6
Q ss_pred CeeeccCCccEEEEEecC--C--cEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLAD--G--TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|++|.||+|.+.+ + ..||+|.+...........+.+|++++++++|+||+++++.+.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998643 3 36999998755544556789999999999999999999999988 889999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc--c
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY--L 241 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~ 241 (407)
|+|.+++.......+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..+...... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999987554356899999999999999999999998 999999999999999999999999999877543221 1
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.+..++.++|||||||++|||++ |+.|+...... ........... ..
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~~~~~~~-------~~--- 220 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------QILKKIDKEGE-------RL--- 220 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHhcCC-------cC---
Confidence 123457788999999998899999999999999999999 99988543221 11111111110 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011223457889999999999999999999999874
No 193
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.4e-40 Score=301.59 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=205.2
Q ss_pred cCCCCCCeeeccCCccEEEEEecC-CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|+..+.||+|+||.||+|...+ +..+++|.+.... ....+.+|++++++++|+||+++++++......++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578888999999999999998754 8899999985332 266899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+.+++|.+++... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 80 CGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999999998543 346899999999999999999999988 99999999999999999999999999987654332
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
......++..|+|||.+.+..++.++||||||+++|+|++|+.|+....+.... . .... ...+..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~------~-~~~~-----~~~~~~--- 219 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI------F-MIPN-----KPPPTL--- 219 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh------h-hhcc-----CCCCCC---
Confidence 122345788999999999889999999999999999999999998643222110 0 0000 000111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+......+.+++.+||+.+|++|||+.+++++-+
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~ 255 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence 112233456889999999999999999999998754
No 194
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.6e-40 Score=298.15 Aligned_cols=249 Identities=33% Similarity=0.493 Sum_probs=204.1
Q ss_pred CeeeccCCccEEEEEecC----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|.... +..|++|.+...........+.+|++.+..++|+|++++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998653 7899999997655444567889999999999999999999999999999999999999
Q ss_pred CChhHHHhccC-------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 164 RSLDLLIYGES-------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 164 g~L~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
++|.+++.... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999986542 356899999999999999999999988 99999999999999999999999999987765
Q ss_pred CCc-ccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 237 DQA-YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 237 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
... .......++..|+|||.+....++.++||||||++++||++ |..|+...... ........+..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~----- 225 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-------EVLEYLRKGYR----- 225 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcCCC-----
Confidence 432 12234557889999999988899999999999999999999 58888654211 11222221111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. ..+...+..+.+++.+||+.+|++|||+.+++++|+
T Consensus 226 --~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 --L---PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --C---CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0 112223567899999999999999999999999873
No 195
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.6e-40 Score=305.20 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=202.4
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCc----EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
++|+..+.||+|+||.||+|.+ .+|. .||+|.+...........+.+|+.++..++|+||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 5677789999999999999974 3454 48999987555556667889999999999999999999998754 5689
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
++||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++....
T Consensus 86 ~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999986433 45899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 237 DQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 237 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
..... .....++..|+|||.+.+..++.++|||||||++|||++ |..|+...... ........+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~---- 230 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR-------EIPDLLEKGERL---- 230 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCCcC----
Confidence 33221 112335678999999998899999999999999999998 88887543211 111122221111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
......+..+.+++.+||+.||++||++.++++.|...
T Consensus 231 ------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 231 ------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred ------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 01122345688999999999999999999999988654
No 196
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=315.54 Aligned_cols=270 Identities=21% Similarity=0.276 Sum_probs=207.6
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-C-----CceeeeeeeeecCCee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-H-----KNLVRLLGCCSDGSQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~ 154 (407)
-+|.+.+.||+|+||.|.++.. .+++.||||+++.. ..-..+-..|+.+|..++ | -|+|+++++|...++.
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 3788899999999999999974 56999999999633 334445568999999886 4 4899999999999999
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC--CceEEecccCcc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK--FQSKIGDFGLAR 232 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~--~~~kl~Dfgla~ 232 (407)
|||+|.+.. +|.++++.++-.+++...+..++.||+.||.+||+.+ |||+||||+||||.+. ..+||+|||.|+
T Consensus 264 ciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccc
Confidence 999999965 9999999888888999999999999999999999998 9999999999999753 479999999999
Q ss_pred ccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCccc--------CchhHHHHH--
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEM--------QYLPEYAWK-- 302 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~--------~~~~~~~~~-- 302 (407)
.....-. ..+-+..|.|||++.+.+|+.+.|+||||||+.||++|.+.|.+....+. ...+.+..+
T Consensus 340 ~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 340 FESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred ccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 7665443 45677899999999999999999999999999999999877654332110 000011100
Q ss_pred -----HHHh-Ccccc--------------------------ccCc-ccc--cCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 040557 303 -----LYER-GRILE--------------------------LVDP-RMR--KEGIVERDALQVINVAFICLQPHGNQRPP 347 (407)
Q Consensus 303 -----~~~~-~~~~~--------------------------~~d~-~~~--~~~~~~~~~~~l~~l~~~cl~~~p~~RPs 347 (407)
.+.. ..... ..-| ... ...........+++++.+||.+||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 0011 00000 0000 000 00111134567899999999999999999
Q ss_pred HHHHHHHhhccccC
Q 040557 348 MSEIVAMLTCKVES 361 (407)
Q Consensus 348 ~~ev~~~l~~~~~~ 361 (407)
..+.++|-+.....
T Consensus 496 p~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 496 PAQALNHPFLTGTS 509 (586)
T ss_pred HHHHhcCccccccc
Confidence 99999998866433
No 197
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.2e-40 Score=306.94 Aligned_cols=255 Identities=23% Similarity=0.361 Sum_probs=206.1
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.+|+..+.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++|+|++++++.+..+...++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 5788888999999999999985 4689999999864433 3346788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||++.........
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred cCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 999999999853 34789999999999999999999998 999999999999999999999999998865433221
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....+++.|+|||.+.+..++.++|||||||++|+|++|+.||....+.. ........+ . +..
T Consensus 173 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~~-~-----~~~--- 236 (296)
T cd06654 173 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNG-T-----PEL--- 236 (296)
T ss_pred -cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcCC-C-----CCC---
Confidence 223468899999999998889999999999999999999999996543211 111111100 0 001
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
..+......+.+++.+||+.+|++||++.+++++-+...
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 012223456889999999999999999999999876544
No 198
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.3e-40 Score=298.09 Aligned_cols=248 Identities=29% Similarity=0.439 Sum_probs=198.1
Q ss_pred CeeeccCCccEEEEEec--C--CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA--D--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... + +..+|+|.+...........+.+|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999743 2 36899999876555456678999999999999999999999876 4567999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|.+++.... .+++..+..++.|++.|+.|||..+ ++|+||||+||+++.++.++|+|||+++...........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 99999996443 6899999999999999999999988 999999999999999999999999999876543332211
Q ss_pred --ccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 244 --NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 244 --~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ........+...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-------~~~~~~~~~~~~---------- 217 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-------EVIAMLESGERL---------- 217 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHcCCcC----------
Confidence 1223567999999998899999999999999999998 89888643221 111222222111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+...+..+.+++.+||+.+|++||++.++++.|...
T Consensus 218 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 01122345688999999999999999999999999764
No 199
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-40 Score=321.71 Aligned_cols=264 Identities=21% Similarity=0.265 Sum_probs=199.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.+|.+.+.||+|+||.||+|... .++.||||.... ..+.+|+++|++++|+||+++++++..++..++|||+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 36888899999999999999865 478899996421 2356899999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+. ++|..++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++........
T Consensus 242 ~~-~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 YR-SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred cC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 95 6888877543 235899999999999999999999998 999999999999999999999999999876443221
Q ss_pred -cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCc-ccCchhHHHHHHHHhCcccc-ccC---
Q 040557 241 -LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS-EMQYLPEYAWKLYERGRILE-LVD--- 314 (407)
Q Consensus 241 -~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~d--- 314 (407)
......||..|+|||++.+..++.++|||||||++|||++|..++...... ........+.+.+....... .+.
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 123457999999999999999999999999999999999988765432211 11111112222222211100 000
Q ss_pred -----------------cccccCCC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 315 -----------------PRMRKEGI--VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 315 -----------------~~~~~~~~--~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
+....... .......+.+|+.+||+.||++|||+.|+++|-++
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f 458 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF 458 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCccc
Confidence 00000000 00122467889999999999999999999999775
No 200
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.4e-40 Score=303.23 Aligned_cols=254 Identities=27% Similarity=0.410 Sum_probs=202.6
Q ss_pred CCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccC-----hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKS-----QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
+|+.++.||+|+||.||+|...+|+.+|+|.+..... ......+.+|+++++.++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4788899999999999999888899999998864321 22345688999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++++|.+++... ..+++..+..++.|++.|++|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999998543 35789999999999999999999988 999999999999999999999999999765321
Q ss_pred C-----cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 238 Q-----AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 238 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
. ........|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..........+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~---- 226 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-----AAMFYIGAHRGL---- 226 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-----HHHHHhhhccCC----
Confidence 1 11122356889999999999888999999999999999999999998643211 111000000000
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+.. +......+.+++.+||+.+|++||++.+++++-+
T Consensus 227 -~~~~-----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 227 -MPRL-----PDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred -CCCC-----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 0111 1223456889999999999999999999998643
No 201
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.4e-40 Score=297.80 Aligned_cols=253 Identities=24% Similarity=0.426 Sum_probs=208.1
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||.|+||.||.++. .+++.+++|.+.... .......+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477889999999999999974 468999999986543 344556788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++|+|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99999999997654566899999999999999999999988 99999999999999999999999999987654432
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
......+++.|+|||.+.+..++.++||||||+++|||++|+.|+...... ....... .+....
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~-~~~~~~--------- 220 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL------NLVVKIV-QGNYTP--------- 220 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHH-cCCCCC---------
Confidence 223456899999999998888999999999999999999999998643221 1222221 111110
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+..+.+++.+||+.+|++||++.++++++.
T Consensus 221 -~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 221 -VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred -CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 11223456889999999999999999999998763
No 202
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=300.22 Aligned_cols=262 Identities=27% Similarity=0.359 Sum_probs=197.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-----eeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS-----QRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 155 (407)
-.|...+++|.|+||.||+|... +++.||||+...+.... -+|+++|+.++|||||+++-+|.... ...
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 34566789999999999999854 57999999986544322 27999999999999999998875322 345
Q ss_pred EEEEeccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC-CceEEecccCcc
Q 040557 156 LVYEYMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK-FQSKIGDFGLAR 232 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgla~ 232 (407)
+|||||+. +|.+.++. ..+..++...+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999987 88877752 23455777777889999999999999988 9999999999999955 999999999999
Q ss_pred ccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC----
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG---- 307 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 307 (407)
.+...... ....-|..|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+....+ .+.... +.+..-
T Consensus 175 ~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~d--QL~eIi-k~lG~Pt~e~ 249 (364)
T KOG0658|consen 175 VLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVD--QLVEII-KVLGTPTRED 249 (364)
T ss_pred eeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHH--HHHHHH-HHhCCCCHHH
Confidence 88655433 34556889999999887 589999999999999999999999887644321 111111 111100
Q ss_pred ------ccccccCcccccCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 308 ------RILELVDPRMRKEG----IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 308 ------~~~~~~d~~~~~~~----~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
...+.-.+.+.... .....+.+.++++.++|+.+|.+|.++.|++.|--+
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fF 309 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFF 309 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhh
Confidence 00011112222211 233456789999999999999999999999987543
No 203
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.7e-40 Score=304.26 Aligned_cols=255 Identities=25% Similarity=0.390 Sum_probs=208.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|+..+.||.|++|.||+|... +++.||+|.+...........+.+|+++++.++|+|++++.+++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 35777889999999999999864 68899999986554445556788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++... .+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 153 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS- 153 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccc-
Confidence 9999999998543 6899999999999999999999988 99999999999999999999999999987764422
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
......++..|+|||.+.+..++.++||||||+++|||+||+.||....+.. .. .....+. .+.+...
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~~-~~~~~~~-----~~~~~~~ 221 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR------VL-FLIPKNN-----PPSLEGN 221 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH------HH-HHhhhcC-----CCCCccc
Confidence 2233568889999999998889999999999999999999999986433211 11 1111111 1111110
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
..+..+.+++.+||+.+|++|||+++++++-+...
T Consensus 222 ----~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 222 ----KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred ----ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence 13456889999999999999999999999877644
No 204
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=291.77 Aligned_cols=258 Identities=25% Similarity=0.295 Sum_probs=208.5
Q ss_pred hcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.++|++.+.||+|.|+.||+.. ..+|+.+|+|.+.... ...+.+.+.+|+++-+.|+||||+++...+......|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3567777889999999999985 4579999999886554 3346678899999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc---CCCceEEecccCccccC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD---EKFQSKIGDFGLARFFP 235 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~---~~~~~kl~Dfgla~~~~ 235 (407)
|+|.|++|..-+-.+ ...++..+...+.||++||.|+|.++ |+|||+||.|+++. ....+||+|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999986544222 45788888999999999999999999 99999999999995 34568999999999887
Q ss_pred CCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 236 EDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
.. .....+.|||+|||||++...+|+..+|||+.||+||-|+.|.+||..... ..+++.+..+.. |
T Consensus 165 ~g--~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-------~rlye~I~~g~y----d- 230 (355)
T KOG0033|consen 165 DG--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYEQIKAGAY----D- 230 (355)
T ss_pred Cc--cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-------HHHHHHHhcccc----C-
Confidence 33 334568899999999999999999999999999999999999999975322 122222222211 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+... ......++..+|+++||..||.+|.|+.|.+.|.|-..
T Consensus 231 -~~~~-~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 231 -YPSP-EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred -CCCc-ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 1111 11223456889999999999999999999999988543
No 205
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.7e-40 Score=299.75 Aligned_cols=251 Identities=28% Similarity=0.469 Sum_probs=201.5
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
.+|+..+.||+|+||.||+|...++..+|+|.+.... .....+.+|++++++++|+|++++++++......++||||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA--MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC--CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 3566778999999999999988778899999885332 23456889999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++++|.+++.... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++..........
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 82 EHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 9999999986443 34789999999999999999999988 9999999999999999999999999998664433222
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.++.++.++||||||+++|||++ |+.|+...... .... ....+. ....+..
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~~-~~~~~~--~~~~~~~--- 225 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS------EVVE-TINAGF--RLYKPRL--- 225 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH------HHHH-HHhCCC--CCCCCCC---
Confidence 223345678999999998899999999999999999998 88887643211 1111 111110 1111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.+..+.+++.+||+.+|++|||+.+++++|
T Consensus 226 -----~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 -----ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -----CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 235688999999999999999999999987
No 206
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9e-43 Score=300.53 Aligned_cols=250 Identities=26% Similarity=0.362 Sum_probs=210.7
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
|.+..+||+|+||.||++.++ .|..+|+|.+..+. +.+++.+|+.+|.+++.+++|+++|.|.....+|+|||||.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 555678999999999999754 69999999986543 45678899999999999999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
.|+..+++.. +++.+++.++..++...+.||+|||... -+|||||..||||+.+|.+||+|||.|..+.+.... .
T Consensus 112 AGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK-R 186 (502)
T KOG0574|consen 112 AGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK-R 186 (502)
T ss_pred CCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhHHh-h
Confidence 9999999864 4567999999999999999999999987 899999999999999999999999999877654432 3
Q ss_pred cccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
.++.||+.|||||++..-.|+.++||||+|+...||.-|++|+..-.+...-++ +.....|.++ .
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM------------IPT~PPPTF~---K 251 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM------------IPTKPPPTFK---K 251 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe------------ccCCCCCCCC---C
Confidence 457899999999999999999999999999999999999999865433211110 0001112222 3
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 323 VERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
++..+.++.++++.||-+.|++|-|+.++++|--
T Consensus 252 PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 252 PEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 5667888999999999999999999999998853
No 207
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3e-40 Score=302.01 Aligned_cols=249 Identities=24% Similarity=0.396 Sum_probs=195.1
Q ss_pred CeeeccCCccEEEEEecC-Cc--EEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLAD-GT--LVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|...+ +. .+++|.+...........+.+|++++.++ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998753 43 46888886444455566889999999999 899999999999999999999999999
Q ss_pred CChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEeccc
Q 040557 164 RSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 164 g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
|+|.+++.... ...+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999986432 134789999999999999999999988 9999999999999999999999999
Q ss_pred CccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCc
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGR 308 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 308 (407)
++....... .......+..|+|||++....++.++||||||+++|||++ |..||...... . .......+.
T Consensus 158 l~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~-~~~~~~~~~ 228 (270)
T cd05047 158 LSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------E-LYEKLPQGY 228 (270)
T ss_pred Cccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH------H-HHHHHhCCC
Confidence 986322111 1111234567999999988889999999999999999997 88888543211 1 111111111
Q ss_pred cccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 309 ILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 309 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
... .+...+..+.+++.+||+.+|.+|||+.+++..|..+
T Consensus 229 -------~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 229 -------RLE---KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred -------CCC---CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 000 1112345688999999999999999999999998754
No 208
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.3e-40 Score=300.93 Aligned_cols=256 Identities=25% Similarity=0.362 Sum_probs=204.5
Q ss_pred cCCCCCCeeeccCCccEEEEEecC----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
++|++.+.||+|+||.||+|...+ ...||+|...........+.+.+|+.+++.++|+||+++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999997543 246899988655445566789999999999999999999999876 457899
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++|+|.+++.... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999986533 35899999999999999999999988 999999999999999999999999999876554
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
.........++..|+|||.+....++.++||||||+++|||++ |..||...... .... ....+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~~-~~~~~~~~------ 227 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN------DVIG-RIENGERL------ 227 (270)
T ss_pred cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH------HHHH-HHHcCCcC------
Confidence 3332333345568999999988889999999999999999986 99988644321 1111 11111100
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
..+...+..+.+++.+|+..+|++|||+.++++.|....
T Consensus 228 ----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 228 ----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 011223457889999999999999999999999997643
No 209
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2e-40 Score=305.61 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=203.3
Q ss_pred HHHHHHHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeee--
Q 040557 74 FQTLKKATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCS-- 149 (407)
Q Consensus 74 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~-- 149 (407)
++.+..+.++|++.+.||+|+||.||++... +++.+|+|.+... ......+.+|+.++..+ +|+||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI--HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc--cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 3455667789999999999999999999764 5889999987432 22335678899999999 7999999999873
Q ss_pred ---cCCeeEEEEEeccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceE
Q 040557 150 ---DGSQRLLVYEYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSK 224 (407)
Q Consensus 150 ---~~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~k 224 (407)
.++..++||||+++++|.+++... ....+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEE
Confidence 445789999999999999887532 3356889999999999999999999988 99999999999999999999
Q ss_pred EecccCccccCCCCcccccccccCccccCcccccc-----CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHH
Q 040557 225 IGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR-----GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 225 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~ 299 (407)
|+|||++........ ......|++.|+|||.+.. ..++.++|||||||++|||++|+.|+....... .
T Consensus 165 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~------~ 237 (286)
T cd06638 165 LVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR------A 237 (286)
T ss_pred EccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH------H
Confidence 999999986643322 2233468999999998753 457889999999999999999999986432211 0
Q ss_pred HHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 300 AWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 300 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
... ...+.. +... .+......+.+++.+||+.||++|||+.|++++++
T Consensus 238 ~~~-~~~~~~-----~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 238 LFK-IPRNPP-----PTLH---QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred Hhh-ccccCC-----Cccc---CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 000 001100 1110 11112346889999999999999999999999875
No 210
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.3e-41 Score=326.13 Aligned_cols=264 Identities=22% Similarity=0.281 Sum_probs=194.7
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--------
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG-------- 151 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 151 (407)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+|+.+|+.++|+||+++.+++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 46799999999999999999986 468899999885322 1234799999999999999998876321
Q ss_pred CeeEEEEEeccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-ceEEecc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-QSKIGDF 228 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-~~kl~Df 228 (407)
...++||||+++ +|.+++.. .....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence 246799999975 66665532 23456899999999999999999999998 99999999999999654 7999999
Q ss_pred cCccccCCCCcccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC
Q 040557 229 GLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG 307 (407)
Q Consensus 229 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 307 (407)
|+++.+..... .....||+.|+|||.+.+. .++.++|||||||++|||++|.+||......+. +.... ......
T Consensus 216 Gla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~~i~-~~~~~p 290 (440)
T PTZ00036 216 GSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--LVRII-QVLGTP 290 (440)
T ss_pred ccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHH-HHhCCC
Confidence 99987654332 2345789999999988764 689999999999999999999999975433211 00000 000000
Q ss_pred ----------ccccccCccccc----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 308 ----------RILELVDPRMRK----EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 308 ----------~~~~~~d~~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
...+.--+.... ...+...+.++.+++.+||+.||++|||+.|+++|.++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~ 355 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD 355 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHH
Confidence 000000000000 001112345788999999999999999999999998864
No 211
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.9e-41 Score=296.95 Aligned_cols=266 Identities=25% Similarity=0.315 Sum_probs=201.1
Q ss_pred CCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccCh-hhHHHHHHHHHHHHcCCCCc-eeeeeeeeecCC------ee
Q 040557 84 FHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSIQHKN-LVRLLGCCSDGS------QR 154 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------~~ 154 (407)
|...++||+|+||+||+|+. .+|+.||+|++...... ..-....+|+.+|..++|+| |+++.+++...+ ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 33445699999999999984 47899999999766542 22244579999999999999 999999998777 78
Q ss_pred EEEEEeccCCChhHHHhccCC--CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 155 LLVYEYMKNRSLDLLIYGESD--KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
++|+||++. +|..++..... ..++...+..++.|++.||+|||+++ |+||||||.|||++++|.+||+|||+|+
T Consensus 93 ~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 93 YLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred EEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHH
Confidence 999999965 89999875543 46788889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCcccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc--
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI-- 309 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 309 (407)
.+.-.... .+..++|..|.|||++.+. .|+...||||+||++.||++++..|.+....+ .+ ..+.+.+..-..
T Consensus 169 a~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~--ql-~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 169 AFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID--QL-FRIFRLLGTPNEKD 244 (323)
T ss_pred HhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH--HH-HHHHHHcCCCCccC
Confidence 76532221 2456789999999999886 79999999999999999999988886554311 11 111111111000
Q ss_pred ----ccccCcc--cccCC----CCHH---HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 310 ----LELVDPR--MRKEG----IVER---DALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 310 ----~~~~d~~--~~~~~----~~~~---~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
....+.. ..... .... ...+..+++.+|++.+|.+|.|++.++.|-.+
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf 305 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYF 305 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhh
Confidence 0000100 00000 0011 11368899999999999999999999998544
No 212
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=9.4e-41 Score=310.22 Aligned_cols=271 Identities=23% Similarity=0.352 Sum_probs=202.8
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|+..+.||+|+||.||+|+.. +++.||+|.+...........+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888899999999999999864 68899999986554444445678999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+. ++|..++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.........
T Consensus 86 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 86 LD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 97 5888887543 345889999999999999999999998 999999999999999999999999999765432221
Q ss_pred cccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCc--------hhHHHHHHHHhCcccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQY--------LPEYAWKLYERGRILE 311 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 311 (407)
.....+++.|+|||.+.+. .++.++||||||+++|||++|+.||......+... .....+..........
T Consensus 161 -~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 161 -YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred -ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 1234578899999987654 57889999999999999999999986543211000 0000000000000000
Q ss_pred ccC-cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 312 LVD-PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 312 ~~d-~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+ +..... ......+..+.+++.+||+.||.+|||+.|+++|-|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 000 000000 00011244678999999999999999999999998864
No 213
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.7e-40 Score=297.28 Aligned_cols=248 Identities=29% Similarity=0.409 Sum_probs=199.7
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeee-cCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS-DGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 160 (407)
++|++.+.||+|+||.||++... |..+|+|.+... .....+.+|+.++++++|+|++++++++. ..+..+++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC---chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 46788899999999999999874 788999988532 23457889999999999999999999764 55678999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.......+++..+.+++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999999987655556899999999999999999999988 9999999999999999999999999997554322
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
....++..|+|||++.+..++.++|||||||++|||++ |+.|+..... .... .....+.. +
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~------~~~~-~~~~~~~~-----~---- 218 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL------KDVV-PRVEKGYK-----M---- 218 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH------HHHH-HHHhcCCC-----C----
Confidence 12345668999999988899999999999999999998 8888753221 1111 11111110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
......+..+.+++.+||+.+|++|||+.++++.|..
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 -DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 1112235568899999999999999999999999864
No 214
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.1e-40 Score=304.13 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=209.7
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|++.+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 36788899999999999999985 479999999986433 2334568899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++........
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 97 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999999843 34789999999999999999999988 99999999999999999999999999986644332
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||....+..... .... +.. +..
T Consensus 171 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~-~~~-----~~~-- 235 (297)
T cd06656 171 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIAT-NGT-----PEL-- 235 (297)
T ss_pred C-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eecc-CCC-----CCC--
Confidence 2 223468889999999999889999999999999999999999996543221100 0000 000 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCCCC
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~~~ 364 (407)
..+...+..+.+++.+||+.+|++||++.+++++-+.......+
T Consensus 236 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (297)
T cd06656 236 -QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279 (297)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence 01222345578999999999999999999999998766544433
No 215
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-39 Score=307.00 Aligned_cols=260 Identities=28% Similarity=0.424 Sum_probs=205.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec--------CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCC
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA--------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGS 152 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 152 (407)
.+|++++.||+|+||.||+|... .+..||+|.+...........+.+|++++.++ +|+||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888899999999999999642 12368999886544455567889999999999 8999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccC--------------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES--------------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~ 218 (407)
..+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence 9999999999999999986432 235789999999999999999999988 99999999999999
Q ss_pred CCCceEEecccCccccCCCCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCch
Q 040557 219 EKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYL 296 (407)
Q Consensus 219 ~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~ 296 (407)
+++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 242 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------ 242 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------
Confidence 99999999999998665432221 122334568999999999999999999999999999998 7777753221
Q ss_pred hHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 297 PEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 297 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
.........+.... .+...+..+.+++.+||+.+|++||++.++++.|......
T Consensus 243 -~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 243 -EELFKLLKEGHRMD----------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred -HHHHHHHHcCCCCC----------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 11112222111110 1112345688999999999999999999999999876543
No 216
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.1e-40 Score=334.54 Aligned_cols=259 Identities=24% Similarity=0.345 Sum_probs=202.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|... +|+.||+|++.... ......++.+|+++++.++||||+++++++.+++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57888999999999999999864 58999999986432 2334567899999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccC---------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEeccc
Q 040557 159 EYMKNRSLDLLIYGES---------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
||++||+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999885321 234567788999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCCc-----------------ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcc
Q 040557 230 LARFFPEDQA-----------------YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSE 292 (407)
Q Consensus 230 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~ 292 (407)
++........ .......||+.|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986621110 01123469999999999999999999999999999999999999986532211
Q ss_pred cCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcc
Q 040557 293 MQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRP-PMSEIVAMLTCK 358 (407)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-s~~ev~~~l~~~ 358 (407)
. .. .... .++.-.. .....+..+.+++.+||+.||++|| +++++++.|...
T Consensus 239 i------~~----~~~i---~~P~~~~--p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 239 I------SY----RDVI---LSPIEVA--PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred h------hh----hhhc---cChhhcc--ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 00 0000 0110000 0112345688999999999999996 566676666544
No 217
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.3e-40 Score=302.90 Aligned_cols=258 Identities=23% Similarity=0.358 Sum_probs=203.4
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
|++.+.||+|+||.||+|... ++..+++|.+... .......+.+|+++++.++|+|++++++++..++..++|+||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 455678999999999999865 4778899988532 34455678899999999999999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+++|..++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........ ..
T Consensus 86 ~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-~~ 160 (282)
T cd06643 86 GGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-RR 160 (282)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccccccc-cc
Confidence 99998887543 346899999999999999999999998 99999999999999999999999999976543221 12
Q ss_pred cccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 243 TNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
....++..|+|||.+. +..++.++|||||||++|||++|+.||....+. ........ ... +.+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~-~~~-----~~~ 228 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM------RVLLKIAK-SEP-----PTL 228 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH------HHHHHHhh-cCC-----CCC
Confidence 3356899999999874 345788999999999999999999998643211 11111111 110 111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCC
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~ 362 (407)
. .+...+..+.+++.+||+.+|++||++.+++++.+......
T Consensus 229 ~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 229 A---QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred C---CccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 0 11123456889999999999999999999999988765443
No 218
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.3e-39 Score=295.35 Aligned_cols=252 Identities=33% Similarity=0.539 Sum_probs=203.6
Q ss_pred CCCCCeeeccCCccEEEEEecC-----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 84 FHPGNLLGRGGFGPVYRGKLAD-----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
+++.+.||.|+||.||++...+ +..||+|.+...........+.+|++.+..++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3566889999999999998653 38899999965554446678999999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++++|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999986544433899999999999999999999998 9999999999999999999999999998776543
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
........++..|+|||.+.+..++.++||||||+++++|++ |..|+..... .. .......+...
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~------~~-~~~~~~~~~~~------- 223 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN------EE-VLEYLKKGYRL------- 223 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHhcCCCC-------
Confidence 332222347789999999988889999999999999999998 6777654211 11 11112211111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
......+..+.+++.+||+.+|++|||+.++++.|
T Consensus 224 ---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ---PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 01112455788999999999999999999999864
No 219
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.2e-40 Score=302.96 Aligned_cols=257 Identities=23% Similarity=0.337 Sum_probs=204.9
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
+|++.+.||+|+||.||++... +|..||+|.+...........+.+|++++.+++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5778889999999999999865 689999999865444445568899999999999999999999999999999999999
Q ss_pred cCCChhHHHhccC-CCCCCHHHHHHHHHHHHHHhcccccc-CCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 162 KNRSLDLLIYGES-DKFLNWSTRFQIILGIARGLQYLHED-SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 162 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
++++|..++.... ...+++..+..++.|++.||.|||+. + ++|+||+|+||+++.++.++|+|||++..+.....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 9999998886432 33689999999999999999999964 5 99999999999999999999999999976543221
Q ss_pred ccccccccCccccCccccccC------CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRG------ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
....++..|+|||.+.+. .++.++|||||||++|||++|+.||....... ....... ...+..
T Consensus 159 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~-~~~~~~---- 227 (286)
T cd06622 159 ---KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQLSA-IVDGDP---- 227 (286)
T ss_pred ---ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHHHHH-HhhcCC----
Confidence 234578899999988554 35889999999999999999999986432211 0000000 111110
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+ ..+......+.+++.+||+.+|++||++.+++.+.|...
T Consensus 228 -~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 228 -P-----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred -C-----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 1 122235567889999999999999999999999887543
No 220
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-40 Score=312.74 Aligned_cols=264 Identities=22% Similarity=0.274 Sum_probs=195.8
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
...+|++.+.||+|+||.||+|... ++..||+|..... ....|+.++.+++|+||+++++++......++||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 3467999999999999999999864 5778999975322 2346899999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
|++. ++|..++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 137 e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 137 PHYS-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EccC-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 9995 5787777543 345899999999999999999999998 9999999999999999999999999997543222
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCch----hHHHHHHHHh-Cccccc-
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYL----PEYAWKLYER-GRILEL- 312 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~- 312 (407)
. .....||..|+|||++.+..++.++|||||||++|||+++..++....+...... .......... +.....
T Consensus 212 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (357)
T PHA03209 212 A--FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF 289 (357)
T ss_pred c--cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence 1 2345689999999999999999999999999999999997666543322211100 0011111110 000000
Q ss_pred ------------cCc-ccccCCC-------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 313 ------------VDP-RMRKEGI-------VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 313 ------------~d~-~~~~~~~-------~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
++. ....... ....+.++.+++.+||+.||++|||+.|+++|-++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f 354 (357)
T PHA03209 290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMF 354 (357)
T ss_pred CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchh
Confidence 000 0000000 00123345679999999999999999999999765
No 221
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.4e-40 Score=309.31 Aligned_cols=263 Identities=18% Similarity=0.224 Sum_probs=198.7
Q ss_pred CCCeeecc--CCccEEEEEe-cCCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 86 PGNLLGRG--GFGPVYRGKL-ADGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 86 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
+.++||+| +||+||++.. .+|+.||+|++..... ......+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 34689999 6789999975 5789999999865433 333456778999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc-
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY- 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~- 240 (407)
++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++++||+...........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999986555556899999999999999999999988 999999999999999999999999876433211100
Q ss_pred -----cccccccCccccCcccccc--CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 241 -----LSTNFAGTLGYTAPEYAIR--GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 241 -----~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..... ..+.....+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~-~~~~~~~~~ 231 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ------MLLEK-LNGTVPCLL 231 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH------HHHHH-hcCCccccc
Confidence 0112346778999999876 468999999999999999999999986432111 00000 001111000
Q ss_pred C-------------------ccc----------------ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 314 D-------------------PRM----------------RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 314 d-------------------~~~----------------~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+ ... ............+.+++.+||+.||++|||+.+++++.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 232 DTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred cccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 0 000 00001122345788999999999999999999999988764
No 222
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.2e-40 Score=314.86 Aligned_cols=269 Identities=24% Similarity=0.252 Sum_probs=200.8
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC------
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG------ 151 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 151 (407)
..++|+..+.||+|+||.||++... .++.||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999754 58899999986433 333456788999999999999999999988543
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
...++||||+++ ++...+. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCccc
Confidence 356999999976 5666553 23788999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC---------chhH----
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ---------YLPE---- 298 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~---------~~~~---- 298 (407)
+...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||........- ..+.
T Consensus 167 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 167 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred ccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 8654332 123457899999999999999999999999999999999999998654311100 0000
Q ss_pred ---HHHHHHHhCc-cccccCccc-----c--cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 299 ---YAWKLYERGR-ILELVDPRM-----R--KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 299 ---~~~~~~~~~~-~~~~~d~~~-----~--~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.......... ......+.. . ...........+.+++.+||+.||++|||+.|+++|.|..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence 0000000000 000000000 0 0001111245678999999999999999999999998764
No 223
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1e-39 Score=296.10 Aligned_cols=253 Identities=22% Similarity=0.358 Sum_probs=204.7
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeec-CCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSD-GSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 159 (407)
+|++.+.||+|++|.||++... +++.||+|.+.... .......+.+|++++++++|+|++++.+.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778899999999999999864 57899999986443 23445678899999999999999999988764 446789999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|.+++.......+++..+..++.+++.|+.+||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 999999999987655566899999999999999999999998 99999999999999999999999999987644322
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
......+++.|+|||.+.+..++.++||||||+++++|++|+.|+..... ....... ..+...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~~~-~~~~~~--------- 220 (257)
T cd08223 158 -MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVYRI-IEGKLP--------- 220 (257)
T ss_pred -ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHH-HhcCCC---------
Confidence 22345688999999999999999999999999999999999998864321 1111111 112111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+...+..+.+++.+||+.+|++||++.+++++-+
T Consensus 221 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 256 (257)
T cd08223 221 -PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPY 256 (257)
T ss_pred -CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 112234457889999999999999999999998754
No 224
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.6e-40 Score=307.31 Aligned_cols=263 Identities=20% Similarity=0.278 Sum_probs=189.1
Q ss_pred CCeeeccCCccEEEEEec---CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeec--CCeeEEEEEec
Q 040557 87 GNLLGRGGFGPVYRGKLA---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD--GSQRLLVYEYM 161 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 161 (407)
+++||+|+||.||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....+++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 468999999999999854 46789999885332 22356789999999999999999998854 45678999998
Q ss_pred cCCChhHHHhcc-------CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEE----cCCCceEEecccC
Q 040557 162 KNRSLDLLIYGE-------SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL----DEKFQSKIGDFGL 230 (407)
Q Consensus 162 ~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfgl 230 (407)
.+ +|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||+ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 65 777776422 1235889999999999999999999998 9999999999999 4567899999999
Q ss_pred ccccCCCCcc--cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCch---hHHHHHHH
Q 040557 231 ARFFPEDQAY--LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYL---PEYAWKLY 304 (407)
Q Consensus 231 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~---~~~~~~~~ 304 (407)
++.+...... ......||+.|+|||++.+ ..++.++||||+||++|||++|++||........... ........
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 9876543221 1234578999999999877 4589999999999999999999999965432211100 00011100
Q ss_pred HhC------------cccc--ccCcccccC-----C-------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 305 ERG------------RILE--LVDPRMRKE-----G-------IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 305 ~~~------------~~~~--~~d~~~~~~-----~-------~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
... ...+ ......... . ........+.+++.+||+.||++|||++|+++|-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 316 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 000 0000 000000000 0 00001235789999999999999999999998854
No 225
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8e-40 Score=300.32 Aligned_cols=251 Identities=24% Similarity=0.376 Sum_probs=207.1
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
.|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+.+++.++|+||+++++++.+....++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4566678999999999999864 588999999875555556678899999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++|+|.+++.. ..+++.....++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++........ .
T Consensus 85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~ 157 (277)
T cd06640 85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-K 157 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-c
Confidence 99999998853 34888999999999999999999988 99999999999999999999999999986654332 1
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
.....++..|+|||.+.+..++.++|+||||+++|||++|+.|+....+... . .....+ ....
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~-~~~~~~----------~~~~ 220 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV------L-FLIPKN----------NPPT 220 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH------h-hhhhcC----------CCCC
Confidence 2234678899999999888899999999999999999999999865432211 0 001100 0112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.....+..+.+++.+||+.+|++||++.+++.+.+.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHh
Confidence 334456778999999999999999999999998764
No 226
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.3e-40 Score=296.24 Aligned_cols=253 Identities=21% Similarity=0.357 Sum_probs=206.1
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||+|+||.||++.. .+|+.||+|.+.... ......++.+|++++++++|+||+++.+++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477789999999999999975 468999999986432 233456789999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+.+++|.+++.......+++..+.+++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 99999999887555556899999999999999999999988 999999999999999999999999999866543221
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....|++.|+|||.+.+..++.++|+||||+++++|++|+.|+..... ......... +...
T Consensus 158 -~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~------~~~~~~~~~-~~~~---------- 219 (256)
T cd08218 158 -ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM------KNLVLKIIR-GSYP---------- 219 (256)
T ss_pred -hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH------HHHHHHHhc-CCCC----------
Confidence 2234588899999999988899999999999999999999999864321 112222111 1110
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+......+.+++.+||+.+|++||++.+|+++-+
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~ 255 (256)
T cd08218 220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNF 255 (256)
T ss_pred CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence 011223456889999999999999999999998754
No 227
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.3e-40 Score=299.49 Aligned_cols=256 Identities=28% Similarity=0.407 Sum_probs=203.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
++|+..+.||+|+||.||+|+.. +.+.|++|.+...........+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56788899999999999999853 346799998854444334567999999999999999999999999989999
Q ss_pred EEEEeccCCChhHHHhccCC-------CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecc
Q 040557 156 LVYEYMKNRSLDLLIYGESD-------KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDF 228 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 228 (407)
+||||+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999865441 25899999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhC
Q 040557 229 GLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERG 307 (407)
Q Consensus 229 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 307 (407)
|++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||...... . .......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~------~-~~~~~~~~ 234 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE------E-VLNRLQAG 234 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH------H-HHHHHHcC
Confidence 9987554333322333456778999999988889999999999999999999 66777432211 1 11112211
Q ss_pred ccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 308 RILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 308 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..... .....+..+.+++.+||+.+|++||++.+++++|+
T Consensus 235 ~~~~~---------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 235 KLELP---------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CcCCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11100 11123456889999999999999999999999885
No 228
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.6e-40 Score=312.90 Aligned_cols=265 Identities=25% Similarity=0.336 Sum_probs=200.2
Q ss_pred HHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC----
Q 040557 78 KKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG---- 151 (407)
Q Consensus 78 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 151 (407)
....++|++.+.||+|+||.||+|.. .+++.||||.+.... .......+.+|+++++.++|+||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 34567899999999999999999985 468899999986432 223345678999999999999999999887533
Q ss_pred --CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEeccc
Q 040557 152 --SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 152 --~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
...++++|++ +++|..++.. ..+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCc
Confidence 3568999988 7789887742 35899999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-C
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-G 307 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~ 307 (407)
++....... ....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ........ +
T Consensus 164 ~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~ 233 (343)
T cd07878 164 LARQADDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID------QLKRIMEVVG 233 (343)
T ss_pred cceecCCCc----CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHHHhC
Confidence 998664432 34578999999999877 578999999999999999999999986432210 00000000 0
Q ss_pred c-------------cccccC--cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 308 R-------------ILELVD--PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 308 ~-------------~~~~~d--~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
. ....+. +..... .........+.+++.+||+.||++|||+.|+++|-+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 234 TPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred CCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 0 000000 000000 000011234789999999999999999999999987654
No 229
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.1e-40 Score=325.74 Aligned_cols=271 Identities=20% Similarity=0.235 Sum_probs=194.7
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCC------CCceeeeeeeee
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ------HKNLVRLLGCCS 149 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~ 149 (407)
+....++|++.+.||+|+||+||+|... +++.||||++... ......+..|+.++..++ |.+++++++++.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3445678999999999999999999864 5889999998532 122234456666666654 456888998886
Q ss_pred cC-CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhcccccc-CCCceeeeccccccEEEcCCC------
Q 040557 150 DG-SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED-SHTRIVHRDIKASNVLLDEKF------ 221 (407)
Q Consensus 150 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~i~H~dlk~~Nill~~~~------ 221 (407)
.. ...++|||++ +++|.+++... ..+++..+..++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccc
Confidence 54 5788999988 67888877533 4589999999999999999999974 7 99999999999998765
Q ss_pred ----------ceEEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCc
Q 040557 222 ----------QSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS 291 (407)
Q Consensus 222 ----------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~ 291 (407)
.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~~----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERHS----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cccccCCCCceEEECCCCccccCccc----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 4999999988643222 23467999999999999999999999999999999999999999754321
Q ss_pred ccCch--------h-HHHH--------HHHHh-CccccccCccc----ccCC--CCHHHHHHHHHHHHHccCCCCCCCCC
Q 040557 292 EMQYL--------P-EYAW--------KLYER-GRILELVDPRM----RKEG--IVERDALQVINVAFICLQPHGNQRPP 347 (407)
Q Consensus 292 ~~~~~--------~-~~~~--------~~~~~-~~~~~~~d~~~----~~~~--~~~~~~~~l~~l~~~cl~~~p~~RPs 347 (407)
+.... + .|.. ..+.. +.+....++.. .... ........+++|+.+||+.||++|||
T Consensus 352 ~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t 431 (467)
T PTZ00284 352 EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN 431 (467)
T ss_pred HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC
Confidence 11000 0 0000 00000 00000000000 0000 00011346789999999999999999
Q ss_pred HHHHHHHhhccc
Q 040557 348 MSEIVAMLTCKV 359 (407)
Q Consensus 348 ~~ev~~~l~~~~ 359 (407)
++|+++|-|...
T Consensus 432 a~e~L~Hp~~~~ 443 (467)
T PTZ00284 432 ARQMTTHPYVLK 443 (467)
T ss_pred HHHHhcCccccc
Confidence 999999988754
No 230
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.5e-40 Score=301.39 Aligned_cols=252 Identities=24% Similarity=0.362 Sum_probs=190.4
Q ss_pred eeeccCCccEEEEEecC---CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCC
Q 040557 89 LLGRGGFGPVYRGKLAD---GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
.||+|+||.||+|...+ ...+|+|.+...........+.+|++.++.++|+||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997533 356888887644444556678899999999999999999999999999999999999999
Q ss_pred hhHHHhccC---CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc-
Q 040557 166 LDLLIYGES---DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL- 241 (407)
Q Consensus 166 L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~- 241 (407)
|.+++.... ....++.....++.|++.|++|||+.+ ++||||||+|||+++++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999986543 233567888999999999999999998 9999999999999999999999999987543322211
Q ss_pred ccccccCccccCcccccc-------CCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 242 STNFAGTLGYTAPEYAIR-------GELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~-------~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
.....++..|+|||++.. ..++.++|||||||++|||++ |..|+...... .........+ .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~~-~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE------QVLKQVVREQ-DIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhhcc-CccCC
Confidence 122345678999998643 356889999999999999999 66676533211 1111212211 11111
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
++.. .......+.+++..|| .||++|||+++|++.|.
T Consensus 232 ~~~~-----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQL-----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCcc-----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2211 1223445667888898 49999999999999873
No 231
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.8e-40 Score=302.71 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=202.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|++.+.||+|+||.||+|... ++..+++|.+... .......+.+|+.+++.++|+|++++++++..++..++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 56888899999999999999864 5889999998543 344566788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|..++.... ..+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~- 165 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ- 165 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccccc-
Confidence 99999988775433 45899999999999999999999988 99999999999999999999999999875433221
Q ss_pred cccccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 241 LSTNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
......++..|+|||.+. ...++.++|||||||++|||++|+.|+....+. ...... .... .+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~-~~~~-----~~ 233 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKI-AKSE-----PP 233 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH------HHHHHH-hcCC-----Cc
Confidence 122346788999999885 345788999999999999999999998643221 111111 1110 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
... .+......+.+++.+||+.+|++||++.+++++-+.
T Consensus 234 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 272 (292)
T cd06644 234 TLS---QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFV 272 (292)
T ss_pred cCC---CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 111 112234568899999999999999999999998764
No 232
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.3e-40 Score=302.88 Aligned_cols=262 Identities=26% Similarity=0.389 Sum_probs=205.6
Q ss_pred CHHHHHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeec
Q 040557 73 DFQTLKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSD 150 (407)
Q Consensus 73 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 150 (407)
+..++....+.|++.+.||+|+||.||+|.. .+++.+|+|.+... ......+..|+.++.++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 4455556678899999999999999999986 46889999988533 23445678899999998 79999999999843
Q ss_pred ------CCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceE
Q 040557 151 ------GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSK 224 (407)
Q Consensus 151 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~k 224 (407)
....+++|||+++|+|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence 457899999999999999987655566889999999999999999999998 99999999999999999999
Q ss_pred EecccCccccCCCCcccccccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHH
Q 040557 225 IGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 225 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~ 299 (407)
|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|+.||....+...
T Consensus 162 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~------ 234 (282)
T cd06636 162 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA------ 234 (282)
T ss_pred EeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh------
Confidence 999999876543221 122356889999999876 34678899999999999999999999864322111
Q ss_pred HHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 300 AWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 300 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.... . ....+... ....+..+.+++.+||+.||.+||++.|++++-|
T Consensus 235 ~~~~-~-----~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 235 LFLI-P-----RNPPPKLK----SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred hhhH-h-----hCCCCCCc----ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 0000 0 00011111 1123457899999999999999999999998754
No 233
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=9.5e-40 Score=300.66 Aligned_cols=263 Identities=25% Similarity=0.439 Sum_probs=205.1
Q ss_pred cCCCCCCeeeccCCccEEEEEec-----CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeec--CCee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD--GSQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 154 (407)
..|+..+.||+|+||.||+|... +++.+|+|.+...........|.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35666789999999999999853 3688999998654443356789999999999999999999999877 5578
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
+++|||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999996543 35899999999999999999999988 999999999999999999999999999877
Q ss_pred CCCCccc--ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------chhHHHHHHH
Q 040557 235 PEDQAYL--STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YLPEYAWKLY 304 (407)
Q Consensus 235 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~~~~~~~~~ 304 (407)
....... .....++..|+|||.+.+..++.++||||||++++||++|+.|+......... ..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 6332211 11234556799999998889999999999999999999999887543322111 0001111111
Q ss_pred HhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 305 ERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 305 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+. .. ..+..++..+.+++.+||+.+|++|||+.||+++|..+
T Consensus 240 ~~~~---------~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 240 KEGE---------RL-PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HcCC---------cC-CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1110 00 01122346788999999999999999999999999753
No 234
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.5e-39 Score=297.06 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=190.3
Q ss_pred eeeccCCccEEEEEecCC---cEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCC
Q 040557 89 LLGRGGFGPVYRGKLADG---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
.||+|+||.||+|...++ ..+++|.+...........+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999975433 35667776544444556789999999999999999999999999999999999999999
Q ss_pred hhHHHhccC--CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc-ccc
Q 040557 166 LDLLIYGES--DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA-YLS 242 (407)
Q Consensus 166 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~ 242 (407)
|.+++.... ....++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++........ ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999986532 234677778899999999999999988 99999999999999999999999999864322211 122
Q ss_pred cccccCccccCcccccc-------CCCCccccEEehhHHHHHHHhc-CCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 243 TNFAGTLGYTAPEYAIR-------GELSEKADIYSFGVLVLEIISC-RKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~-------~~~~~k~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
....++..|+|||++.. ..++.++||||||+++|||+++ ..|+..... .+....... +......+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~~-~~~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD------REVLNHVIK-DQQVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHh-hcccccCC
Confidence 34567889999998753 2457899999999999999975 556543211 112222222 22223333
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+.+... ....+.+++..|| .+|++||++.+|++.|.
T Consensus 232 ~~~~~~-----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLELP-----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCCC-----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 333221 2345778899999 57999999999999874
No 235
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-40 Score=317.60 Aligned_cols=267 Identities=19% Similarity=0.196 Sum_probs=201.8
Q ss_pred hcCCCCCCeeeccCCccEEEEEec---CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
..+|.+.+.||+|+||.||++... .+..||+|.+... ..+.+|+++++.++|+||+++++++......++|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 357999999999999999999643 3678999987532 1345899999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
||++. ++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 165 ~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 165 MPKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred ehhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 99996 57888773 3456899999999999999999999998 999999999999999999999999999866543
Q ss_pred Ccc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccc------
Q 040557 238 QAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRIL------ 310 (407)
Q Consensus 238 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 310 (407)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+.+........
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 322 2234579999999999999999999999999999999999999986543321110000001100000000
Q ss_pred -------cccCcccccCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 311 -------ELVDPRMRKEGI------VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 311 -------~~~d~~~~~~~~------~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.......+.... ......++.+++.+||+.||++|||+.|++.|-++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 000000000000 0112346788999999999999999999999987743
No 236
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.2e-40 Score=299.08 Aligned_cols=240 Identities=26% Similarity=0.391 Sum_probs=187.1
Q ss_pred CeeeccCCccEEEEEecC-------------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCee
Q 040557 88 NLLGRGGFGPVYRGKLAD-------------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 154 (407)
+.||+|+||.||+|...+ ...|++|.+... .......+.+|+.++..++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 368999999999997532 235888887533 233445788999999999999999999999999899
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc-------eEEec
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ-------SKIGD 227 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~-------~kl~D 227 (407)
++||||+++|+|..++.... ..+++..+.+++.|++.||+|||+.+ ++||||||+|||++.++. ++++|
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 99999999999998875433 45899999999999999999999998 999999999999987654 89999
Q ss_pred ccCccccCCCCcccccccccCccccCccccc-cCCCCccccEEehhHHHHHHH-hcCCCCCCCCCcccCchhHHHHHHHH
Q 040557 228 FGLARFFPEDQAYLSTNFAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEII-SCRKNTDLTLPSEMQYLPEYAWKLYE 305 (407)
Q Consensus 228 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~Dv~s~G~vl~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~ 305 (407)
||++....... ...++..|+|||.+. +..++.++|||||||++|||+ +|..|+......+ ......
T Consensus 156 ~g~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-------~~~~~~ 223 (262)
T cd05077 156 PGIPITVLSRQ-----ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-------KERFYE 223 (262)
T ss_pred CCCCccccCcc-----cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-------HHHHHh
Confidence 99987553322 345788999999886 467899999999999999998 4777665322111 011111
Q ss_pred hCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 306 RGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 306 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+.. .. .......+.+++.+||+.||++||++.+|+++++
T Consensus 224 -~~~------~~-----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 224 -GQC------ML-----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -cCc------cC-----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 110 00 0112346889999999999999999999998863
No 237
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.1e-40 Score=304.16 Aligned_cols=251 Identities=26% Similarity=0.406 Sum_probs=203.7
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
|+..+.||+|+||.||+|... ++..||+|.+...........+.+|+++++.++|+||+++++++..++..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 344567999999999999754 5789999998655445556688999999999999999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++........ ..
T Consensus 86 ~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~ 158 (277)
T cd06642 86 GGSALDLLKP---GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KR 158 (277)
T ss_pred CCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch-hh
Confidence 9999998843 35899999999999999999999988 99999999999999999999999999986654322 12
Q ss_pred cccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
....++..|+|||.+.+..++.++||||||+++|||++|+.|+....+... .. ....+. .+. .
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~-~~~~~~-----~~~-----~ 221 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV------LF-LIPKNS-----PPT-----L 221 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH------Hh-hhhcCC-----CCC-----C
Confidence 234678899999999998999999999999999999999999864322210 00 111110 111 1
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 323 VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
....+..+.+++.+||+.+|++||++.+++++.+..
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFIT 257 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHH
Confidence 223455688999999999999999999999987743
No 238
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.1e-40 Score=305.86 Aligned_cols=257 Identities=23% Similarity=0.355 Sum_probs=208.0
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.+|+..+.||.|++|.||+|.. .+|+.||+|.+.... ......+.+|+.+++.++|+|++++++++......++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 4688888999999999999975 568999999986433 33456788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|..++.. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 98 ~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 98 LAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred cCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence 999999998843 34899999999999999999999998 999999999999999999999999998866543322
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||....+.. .... ........ ..
T Consensus 172 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~------~~~~-~~~~~~~~-----~~-- 236 (296)
T cd06655 172 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYL-IATNGTPE-----LQ-- 236 (296)
T ss_pred -CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHH-HHhcCCcc-----cC--
Confidence 223468889999999998889999999999999999999999986543211 1111 11111100 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
.+...+..+.+++.+||+.||++||++.+++.+-+.....
T Consensus 237 -~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 237 -NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred -CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 1122345688999999999999999999999998875443
No 239
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.8e-40 Score=295.84 Aligned_cols=248 Identities=28% Similarity=0.407 Sum_probs=199.5
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChh
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLD 167 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 167 (407)
++||+|+||.||++...+++.||+|.+...........+.+|++++++++|+||+++++++.+....++||||+.+++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36999999999999976799999999865544445678999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc-cccc
Q 040557 168 LLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS-TNFA 246 (407)
Q Consensus 168 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-~~~~ 246 (407)
+++.... ..+++..+..++.+++.|+.|||+++ ++||||+|+||+++.++.++|+|||++........... ....
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 9986433 35789999999999999999999998 99999999999999999999999999986543222111 1223
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVER 325 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 325 (407)
++..|+|||.+.++.++.++||||||+++|||+| |..|+....... .......+. .. ..+..
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-------~~~~~~~~~-------~~---~~~~~ 219 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-------TRERIESGY-------RM---PAPQL 219 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-------HHHHHhcCC-------CC---CCCcc
Confidence 4567999999988899999999999999999999 777775432211 111111110 00 11222
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 326 DALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 326 ~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 3457899999999999999999999999884
No 240
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.2e-39 Score=296.52 Aligned_cols=250 Identities=30% Similarity=0.439 Sum_probs=192.5
Q ss_pred CeeeccCCccEEEEEec----CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeee-cCCeeEEEEEecc
Q 040557 88 NLLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS-DGSQRLLVYEYMK 162 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 162 (407)
+.||+|+||.||+|.+. ++..||+|.+...........+.+|+.+++.++|+||+++++++. .++..+++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999753 245799998854444455678889999999999999999999775 4556789999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc--
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-- 240 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-- 240 (407)
+|+|.+++.... ..+++..+..++.|++.|+.|||+.+ ++||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 999999986433 34678888999999999999999988 999999999999999999999999999865432211
Q ss_pred -cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCC-CCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 241 -LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN-TDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 241 -~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
......++..|+|||.+.+..++.++||||||+++|||++|+.| +..... ..... ....+.. ..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~-~~~~~~~-------~~ 222 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS------FDITV-YLLQGRR-------LL 222 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHH-HHhcCCC-------CC
Confidence 11233457789999999888999999999999999999996554 432111 11111 1111110 00
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.+...+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 223 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 223 ---QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred ---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111235688999999999999999999999998754
No 241
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.6e-40 Score=296.96 Aligned_cols=257 Identities=23% Similarity=0.246 Sum_probs=210.4
Q ss_pred cCCCCCCeeeccCCccEEEEEecC-CcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
+.|+..+.||+|.-|+||++++.+ +..+|+|++.+.. ......+...|-+||+.++||.++.+++.++.....|++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 345566789999999999999764 6899999996543 2334456778999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC--
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-- 236 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~-- 236 (407)
|||+||+|..+++.+.++.+++..+..++.+++.||+|||-.| ||.|||||+||||-++|.+-|+||.|+.....
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999999999888999999999999999999999999999 99999999999999999999999999853310
Q ss_pred -------------------------------C-C---------------------cccccccccCccccCccccccCCCC
Q 040557 237 -------------------------------D-Q---------------------AYLSTNFAGTLGYTAPEYAIRGELS 263 (407)
Q Consensus 237 -------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 263 (407)
. . ...+..++||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0 0112245799999999999999999
Q ss_pred ccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCC
Q 040557 264 EKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGN 343 (407)
Q Consensus 264 ~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~ 343 (407)
.++|+|+|||++|||+.|..||.+....+ ...+. +...+.-...+ ..+..+.+||++.|.+||+
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~------Tl~NI---------v~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~ 377 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKE------TLRNI---------VGQPLKFPEEP-EVSSAAKDLIRKLLVKDPS 377 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchh------hHHHH---------hcCCCcCCCCC-cchhHHHHHHHHHhccChh
Confidence 99999999999999999999998754432 11111 11122111111 3456788999999999999
Q ss_pred CCCC----HHHHHHHhhc
Q 040557 344 QRPP----MSEIVAMLTC 357 (407)
Q Consensus 344 ~RPs----~~ev~~~l~~ 357 (407)
+|.. +.||-+|--+
T Consensus 378 kRlg~~rGA~eIK~HpFF 395 (459)
T KOG0610|consen 378 KRLGSKRGAAEIKRHPFF 395 (459)
T ss_pred hhhccccchHHhhcCccc
Confidence 9998 9999888543
No 242
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.8e-40 Score=301.91 Aligned_cols=239 Identities=26% Similarity=0.384 Sum_probs=186.6
Q ss_pred eeeccCCccEEEEEecC-------------------------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceee
Q 040557 89 LLGRGGFGPVYRGKLAD-------------------------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 143 (407)
.||+|+||.||+|.+.. ...||+|.+... .......+.+|+.+++.++|+||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-HRDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-HHHHHHHHHHHHHHHhcCCCCCeee
Confidence 59999999999997421 235889988533 2333457889999999999999999
Q ss_pred eeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC--
Q 040557 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-- 221 (407)
Q Consensus 144 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-- 221 (407)
+++++.+....++||||+++|+|..++... ...+++..+..++.|++.||+|||+.+ ++||||||+|||++..+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 999999999999999999999999888543 345899999999999999999999988 99999999999997643
Q ss_pred -----ceEEecccCccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHH-hcCCCCCCCCCcccC
Q 040557 222 -----QSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEII-SCRKNTDLTLPSEMQ 294 (407)
Q Consensus 222 -----~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~-tg~~p~~~~~~~~~~ 294 (407)
.++++|||++....... ...++..|+|||.+.+ ..++.++||||||+++|||+ +|+.|+....+.+.
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~~-----~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~- 230 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSRE-----ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK- 230 (274)
T ss_pred cCccceeeecCCcccccccccc-----ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-
Confidence 37999999986443221 2357788999998865 56899999999999999995 68888765433211
Q ss_pred chhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 295 YLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
....... ... +......+.+++.+||+.+|++|||+.+|++.|.
T Consensus 231 ------~~~~~~~-------~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 ------ERFYEKK-------HRL-----PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ------HHHHHhc-------cCC-----CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1111110 001 1112245889999999999999999999999873
No 243
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7.7e-40 Score=298.28 Aligned_cols=258 Identities=25% Similarity=0.361 Sum_probs=207.9
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
+|+..+.||.|++|.||++... +++.+|+|.+...........+.+|++++++++|+||+++++++...+..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5667788999999999999875 689999999876555566678899999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
++++|.+++.... ..+++.....++.|++.|+.|||+ .+ ++|+||+|+||++++++.++|+|||.+........
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 9999999986543 568999999999999999999999 77 99999999999999999999999999876543221
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
....++..|+|||.+.+..++.++||||||+++|+|++|+.|+........ ........... .. .+.+.
T Consensus 157 --~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~-~~-----~~~~~-- 225 (265)
T cd06605 157 --KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-GIFELLQYIVN-EP-----PPRLP-- 225 (265)
T ss_pred --hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-cHHHHHHHHhc-CC-----CCCCC--
Confidence 125688899999999998999999999999999999999999865422111 11111111111 10 01111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.......+.+++..||..+|++|||+.+++.+-+..
T Consensus 226 --~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~ 261 (265)
T cd06605 226 --SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261 (265)
T ss_pred --hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhh
Confidence 111455688999999999999999999999987753
No 244
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.4e-40 Score=312.29 Aligned_cols=269 Identities=24% Similarity=0.249 Sum_probs=200.4
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC------
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG------ 151 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 151 (407)
..++|++.+.||+|+||.||++... .++.||||++.... .......+.+|+.+++.++|+||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999854 58899999986432 233456788999999999999999999987543
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
...++||||+++ +|...+. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 357999999975 6666653 23788999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC---------chhHH---
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ---------YLPEY--- 299 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~---------~~~~~--- 299 (407)
+...... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||......+.. ..+.+
T Consensus 174 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 174 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred cccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 8654332 123457899999999999999999999999999999999999999654321100 00000
Q ss_pred ----HHHHHHhCc-ccc----ccCccccc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 300 ----AWKLYERGR-ILE----LVDPRMRK---EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 300 ----~~~~~~~~~-~~~----~~d~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
......... ... .+.+.... ..........+.+++.+||+.||++|||+.++++|-|..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 000000000 000 00000000 000111234678999999999999999999999998753
No 245
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9.5e-40 Score=298.31 Aligned_cols=257 Identities=26% Similarity=0.367 Sum_probs=200.2
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
.+++++.....||+|+||.||+|... ++..||+|.+... .......+.+|+.+++.++|+||+++++++..++..+++
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER-DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC-CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 34556666678999999999999854 5788999988543 334556789999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCC--CHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-CCceEEecccCcccc
Q 040557 158 YEYMKNRSLDLLIYGESDKFL--NWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-KFQSKIGDFGLARFF 234 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~ 234 (407)
+||+++++|.+++.... ..+ ++..+..++.|++.|+.|||+.+ ++||||||+||+++. ++.++|+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 84 MEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 99999999999986432 224 78888899999999999999988 999999999999986 679999999999765
Q ss_pred CCCCcccccccccCccccCccccccCC--CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 235 PEDQAYLSTNFAGTLGYTAPEYAIRGE--LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
..... ......++..|+|||.+.+.. ++.++||||||+++|+|++|+.|+........ ..+.... ...
T Consensus 160 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-----~~~~~~~-~~~--- 229 (268)
T cd06624 160 AGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-----AMFKVGM-FKI--- 229 (268)
T ss_pred ccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-----hHhhhhh-hcc---
Confidence 43222 122345789999999987643 78999999999999999999999864221110 0000000 000
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+ ..+......+.+++.+||+.+|++|||+.+++++-|
T Consensus 230 -~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 267 (268)
T cd06624 230 -HP-----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267 (268)
T ss_pred -CC-----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence 01 112233456889999999999999999999998854
No 246
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=314.30 Aligned_cols=244 Identities=28% Similarity=0.413 Sum_probs=201.7
Q ss_pred CCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 86 PGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 86 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
-.+.||.|+||.||-|+. .+...||||++.... +.....+++.|++.|.+++|||++.+.|||......|||||||-
T Consensus 30 dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl 109 (948)
T KOG0577|consen 30 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL 109 (948)
T ss_pred HHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh
Confidence 345699999999999984 578899999986543 33445689999999999999999999999999999999999996
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
| +-.+++...+ +++-+..+..|+.+.+.||.|||+.+ .||||||..||||++.|.|||+|||.|....+.+
T Consensus 110 G-SAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn---- 180 (948)
T KOG0577|consen 110 G-SASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN---- 180 (948)
T ss_pred c-cHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCchh----
Confidence 4 7788876443 56889999999999999999999998 9999999999999999999999999998776654
Q ss_pred cccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 243 TNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.++|||.|||||++. .+.|+-|+||||+||+-.||.-.++|......... .+ .+..+. .|.+.
T Consensus 181 -sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA------LY-HIAQNe-----sPtLq- 246 (948)
T KOG0577|consen 181 -SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LY-HIAQNE-----SPTLQ- 246 (948)
T ss_pred -cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH------HH-HHHhcC-----CCCCC-
Confidence 478999999999875 57999999999999999999999998764332110 11 111111 12232
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
..+.+..+++++..||++-|.+|||..+++.|-
T Consensus 247 ---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 247 ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred ---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 345677899999999999999999999998774
No 247
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.3e-40 Score=307.30 Aligned_cols=257 Identities=23% Similarity=0.254 Sum_probs=206.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh--hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ--QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|+..+.||+|++|.||+|... +++.||+|.+...... .....+.+|++++..++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36788899999999999999865 4899999998654432 24567889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+.+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999987655567999999999999999999999988 9999999999999999999999999987553221
Q ss_pred cc----------------------------cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCC
Q 040557 239 AY----------------------------LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLP 290 (407)
Q Consensus 239 ~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~ 290 (407)
.. ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 11134678899999999998999999999999999999999999864332
Q ss_pred cccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC----HHHHHHHhhc
Q 040557 291 SEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP----MSEIVAMLTC 357 (407)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs----~~ev~~~l~~ 357 (407)
.. ....... ...... .....+..+.+++.+||+.||++||| +.+++.+-|.
T Consensus 238 ~~------~~~~~~~---------~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 238 DE------TFSNILK---------KEVTFP-GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred HH------HHHHHhc---------CCccCC-CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence 11 1111111 111000 01114567899999999999999999 8888887554
No 248
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=8.6e-40 Score=301.25 Aligned_cols=263 Identities=22% Similarity=0.343 Sum_probs=198.9
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|++.+.||+|++|.||+|... ++..||+|.+..... ......+.+|+.+++.++|+||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677889999999999999864 689999999864432 22345678999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccC-CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGES-DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
++ ++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 58888875433 356899999999999999999999988 99999999999999999999999999986543321
Q ss_pred ccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-Cc---------
Q 040557 240 YLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-GR--------- 308 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~--------- 308 (407)
......+++.|+|||.+.+. .++.++||||||+++|||+||+.||....... ........ +.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 157 -VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID------QLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred -cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHHHhCCCChhhhhcc
Confidence 11234578899999987654 57899999999999999999999987543211 00000000 00
Q ss_pred -----cccccCccccc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 309 -----ILELVDPRMRK--EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 309 -----~~~~~d~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
....++..... .......+.++.+++.+||+.||++|||+.+++.+-|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~ 284 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284 (285)
T ss_pred hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence 00000000000 0000113456789999999999999999999998754
No 249
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=9.4e-40 Score=298.43 Aligned_cols=249 Identities=31% Similarity=0.490 Sum_probs=197.7
Q ss_pred CeeeccCCccEEEEEecC-------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 88 NLLGRGGFGPVYRGKLAD-------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+.||+|+||.||+|+..+ +..+|+|.+...........+.+|+.+++.++|+||+++++++......++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886544445567889999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccC-----CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-----ceEEecccC
Q 040557 161 MKNRSLDLLIYGES-----DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-----QSKIGDFGL 230 (407)
Q Consensus 161 ~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-----~~kl~Dfgl 230 (407)
+++++|.+++.... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++ .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999986432 234789999999999999999999988 99999999999999887 899999999
Q ss_pred ccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCc
Q 040557 231 ARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGR 308 (407)
Q Consensus 231 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 308 (407)
+......... ......++..|+|||.+.++.++.++||||||+++|||++ |+.||...... .. ......+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~------~~-~~~~~~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ------EV-LQHVTAGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH------HH-HHHHhcCC
Confidence 9765433221 1122345778999999999999999999999999999998 88887533211 11 11111111
Q ss_pred cccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 309 ILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 309 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.. ......+..+.+++.+||+.+|++||++.++++.|.
T Consensus 231 -------~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 -------RL---QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -------cc---CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00 112234567889999999999999999999999885
No 250
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.4e-40 Score=302.70 Aligned_cols=269 Identities=22% Similarity=0.341 Sum_probs=202.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|+..+.||+|+||.||+|... +|+.||+|++..... ....+.+.+|+.+++.++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46788899999999999999875 589999999864432 2234567899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|..+... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 9999988887643 335899999999999999999999988 99999999999999999999999999987654332
Q ss_pred ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhH-----HH---HHHHHhCccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE-----YA---WKLYERGRIL 310 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~-----~~---~~~~~~~~~~ 310 (407)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+...... .. ...+..+...
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 1223457889999998876 567899999999999999999999986543321100000 00 0000000000
Q ss_pred -cccCcccccCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 311 -ELVDPRMRKEG----IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 311 -~~~d~~~~~~~----~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
....+...... .....+..+.+++.+||+.+|++||++.|++.|.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~ 285 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence 00000000000 00122456889999999999999999999998754
No 251
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.4e-40 Score=303.13 Aligned_cols=267 Identities=22% Similarity=0.319 Sum_probs=198.8
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|+..+.||+|++|.||+|... +++.||+|.+...........+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888899999999999999865 68999999986544333334567899999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+.+ +|.+++.... ..+++.....++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++........
T Consensus 85 ~~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 85 LDT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred CCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 985 8988876443 36899999999999999999999998 999999999999999999999999998754322211
Q ss_pred cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCc---------cc
Q 040557 241 LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR---------IL 310 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 310 (407)
.....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ....+....... ..
T Consensus 160 -~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 160 -YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ--LHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred -ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH--HHHHHHhcCCCChhhhhhhhhcc
Confidence 122346889999998875 46889999999999999999999998643311000 000000000000 00
Q ss_pred cccC--------cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 311 ELVD--------PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 311 ~~~d--------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+... ..+............+.+++.+||+.+|++|||+.+++++.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 0000 000000000001256789999999999999999999998765
No 252
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.8e-40 Score=303.42 Aligned_cols=264 Identities=25% Similarity=0.337 Sum_probs=206.3
Q ss_pred cCHHHHHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeee
Q 040557 72 FDFQTLKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCS 149 (407)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 149 (407)
++..++..+.++|++.+.||+|+||.||++.. .+++.+|+|.+... ......+.+|+.++.++ +|+|++++++++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI--SDVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc--ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 55567777889999999999999999999986 46889999988532 22345677899999998 8999999999986
Q ss_pred cC-----CeeEEEEEeccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc
Q 040557 150 DG-----SQRLLVYEYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ 222 (407)
Q Consensus 150 ~~-----~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~ 222 (407)
.. +..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCC
Confidence 43 3589999999999999987532 3456899999999999999999999988 999999999999999999
Q ss_pred eEEecccCccccCCCCcccccccccCccccCccccccC-----CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchh
Q 040557 223 SKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-----ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297 (407)
Q Consensus 223 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~ 297 (407)
++|+|||++......... .....|+..|+|||.+... .++.++|||||||++|||++|+.|+....+.
T Consensus 167 ~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~------ 239 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV------ 239 (291)
T ss_pred EEEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH------
Confidence 999999999865433221 2234688899999987643 3688999999999999999999998643221
Q ss_pred HHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 298 EYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 298 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..... ...+... .+. ........+.+++.+||+.+|++||++.++++|-+
T Consensus 240 ~~~~~-~~~~~~~-----~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 289 (291)
T cd06639 240 KTLFK-IPRNPPP-----TLL---HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289 (291)
T ss_pred HHHHH-HhcCCCC-----CCC---cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence 11111 1111111 111 11223456889999999999999999999998855
No 253
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.9e-40 Score=300.63 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=199.5
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|++.+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++.+...+..++||||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 4566677899999999999985 468899999986443 23345678999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++.. ...+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06645 88 CGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATIA- 161 (267)
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCccc-
Confidence 999999998853 345899999999999999999999998 99999999999999999999999999976543221
Q ss_pred cccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 241 LSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
......|+..|+|||.+. ...++.++|||||||++|||++|+.|+....+.. ....... .... .+..
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~------~~~~~~~-~~~~---~~~~ 231 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR------ALFLMTK-SNFQ---PPKL 231 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh------hHHhhhc-cCCC---CCcc
Confidence 123456899999999874 4568899999999999999999999885433211 0111111 1100 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.. ....+..+.+++.+||+.+|++|||++++++|-
T Consensus 232 ~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~ 266 (267)
T cd06645 232 KD---KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHP 266 (267)
T ss_pred cc---cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCC
Confidence 10 011234578999999999999999999999864
No 254
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-39 Score=297.72 Aligned_cols=252 Identities=28% Similarity=0.444 Sum_probs=201.7
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh--------hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ--------QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ 153 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 153 (407)
+|.++..||+|++|.||+|... +++.+|+|.+...... ...+.+.+|+.++++++|+||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778899999999999999754 5889999988543221 123568899999999999999999999999999
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.+++|||+++++|..++... ..+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||+++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999998543 45889999999999999999999988 99999999999999999999999999987
Q ss_pred cCCCCcc-----cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCc
Q 040557 234 FPEDQAY-----LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR 308 (407)
Q Consensus 234 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 308 (407)
....... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~--- 226 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------QAIFKIGE--- 226 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------HHHHHHhc---
Confidence 6532211 112345788999999999989999999999999999999999998643211 11111100
Q ss_pred cccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 309 ILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 309 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
...+. .+...+..+.+++.+||+.||++||++.+++++-+
T Consensus 227 ---~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 266 (267)
T cd06628 227 ---NASPE-----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266 (267)
T ss_pred ---cCCCc-----CCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCC
Confidence 01111 12234566889999999999999999999998643
No 255
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.6e-40 Score=304.85 Aligned_cols=269 Identities=25% Similarity=0.392 Sum_probs=201.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|+..+.||+|+||.||+|... +++.||+|.+...... ...+.+.+|+++++.++|+||+++++++.++...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36778899999999999999875 5899999988644322 234568899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|..+... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 9999999887643 234899999999999999999999988 99999999999999999999999999987644332
Q ss_pred ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------chhHHHHHHHHhCccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YLPEYAWKLYERGRIL 310 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 310 (407)
......++..|+|||.+.+ ..++.++||||||+++|||++|++|+......+.. .+..............
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 156 -VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred -ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 2233567889999998875 45788999999999999999999888643221100 0000000000000000
Q ss_pred -cccCcccccC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 311 -ELVDPRMRKE----GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 311 -~~~d~~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
....+..... ......+..+.+++.+||+.+|++||++.+++++-+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 285 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence 0000000000 001123467899999999999999999999998754
No 256
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.9e-39 Score=297.27 Aligned_cols=265 Identities=25% Similarity=0.291 Sum_probs=206.4
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 159 (407)
+|+..+.||.|++|.||++... +++.+|+|.+...........+.+|+++++.++|+||+++++++.+. +..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5677789999999999999874 58899999987554445567899999999999999999999988543 46899999
Q ss_pred eccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 160 YMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 160 ~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|+++++|.+++.. .....+++.....++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999887653 23455889999999999999999999988 999999999999999999999999998755432
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. ....++..|+|||.+.+..++.++||||||+++|+|++|+.|+......... ..... .......... +....
T Consensus 159 ~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~~~ 232 (287)
T cd06621 159 LA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG-PIELL-SYIVNMPNPE-LKDEP 232 (287)
T ss_pred cc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCC-hHHHH-HHHhcCCchh-hccCC
Confidence 21 2345788999999999999999999999999999999999998755321111 11111 1111111111 11111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
. .....+..+.+++.+||+.+|++|||+.|++++-|...
T Consensus 233 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 233 G---NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred C---CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 0 01123567899999999999999999999999988643
No 257
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.4e-40 Score=305.32 Aligned_cols=264 Identities=22% Similarity=0.346 Sum_probs=204.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|++.+.||+|+||.||+|... +++.||+|.+.... .......+.+|+++++.++|+||+++++++..++..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36788899999999999999865 58899999886433 23345678899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|++++.+..+.. ....+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 999877766653 2345899999999999999999999998 99999999999999999999999999987765543
Q ss_pred ccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH-------------
Q 040557 240 YLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE------------- 305 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------- 305 (407)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.|+......+ ..+....
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID------QLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCCHHHhhhc
Confidence 233345688899999999888 88999999999999999999999886432211 1110000
Q ss_pred --hC-----ccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 306 --RG-----RILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 306 --~~-----~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.. ...+..++.......+...+..+.+++.+||+.+|++|||+++++++-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 287 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence 00 0000000000000111223567899999999999999999999998754
No 258
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4e-40 Score=303.35 Aligned_cols=266 Identities=22% Similarity=0.300 Sum_probs=198.4
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||+|+||.||+|+.. +|+.||+|.+..... ......+.+|++++++++|+||+++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999864 689999999864332 22335677899999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+.+ +|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 81 CDQ-DLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred CCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 974 777776533 345899999999999999999999998 999999999999999999999999999865433221
Q ss_pred cccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC------cccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG------RILELV 313 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 313 (407)
.....++..|+|||.+.+. .++.++|||||||++|||+||+.|+......... ........... ......
T Consensus 156 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 156 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ--LKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred -cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH--HHHHHHHhCCCChHHhHHhhhcc
Confidence 1234578899999988764 4789999999999999999999886533221100 00000000000 000000
Q ss_pred Cc----cccc----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 314 DP----RMRK----EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 314 d~----~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+. .... ..........+.+++.+||+.||++|||+.++++|.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~ 283 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCC
Confidence 00 0000 0011123456889999999999999999999998865
No 259
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-39 Score=296.01 Aligned_cols=254 Identities=24% Similarity=0.367 Sum_probs=204.5
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|+..+.||.|+||.||+|... +++.+++|.+..... .....+.+|++++++++|+||+++++++.+....+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 57888899999999999999864 578899999864432 3556788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 82 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 82 CGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 9999999988643 245899999999999999999999988 99999999999999999999999999986644321
Q ss_pred cccccccCccccCccccccC---CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRG---ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~---~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
......++..|+|||.+.+. .++.++||||||+++|||++|+.|+....+... ... ...... ..+.+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~------~~~-~~~~~~---~~~~~ 226 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA------LFL-ISKSNF---PPPKL 226 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH------HHH-HHhccC---CCccc
Confidence 12335688899999998776 889999999999999999999999864332110 111 111100 00111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
. .....+..+.+++.+||+.+|.+|||+.+|+.+
T Consensus 227 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 K---DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred c---chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1 123345678999999999999999999999876
No 260
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.3e-39 Score=297.54 Aligned_cols=255 Identities=29% Similarity=0.424 Sum_probs=203.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCc----EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
.+|++.+.||+|+||.||+|... +|+ .+|+|.+...........+.+|+.++.+++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56777899999999999999854 333 5899988665555566788999999999999999999999987 78899
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
||||+++|+|.+++.... ..+++..+..++.|++.|++|||+.+ ++||||+|+||++++++.++|+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999986543 34899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCcccc-cccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 237 DQAYLS-TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 237 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
...... ....++..|+|||.+....++.++||||||+++||+++ |+.|+......+ .......+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~---- 230 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-------IPDLLEKGERL---- 230 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHhCCCCC----
Confidence 332211 12224568999999988899999999999999999998 999986543211 11222221110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+..+...+.+++.+||..+|++||++.++++.|...
T Consensus 231 ------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 231 ------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 01111334688999999999999999999999998754
No 261
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9.8e-40 Score=295.83 Aligned_cols=247 Identities=30% Similarity=0.463 Sum_probs=199.4
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
++|++.+.||+|+||.||+|.. +++.||+|.+.... ....+.+|+.++..++|+|++++++++... ..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 4578889999999999999976 68889999885332 335788999999999999999999998654 479999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
.+++|.+++.......+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 9999999997665556899999999999999999999988 9999999999999999999999999997543221
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....+..|+|||.+.+..++.++|+||||+++|||++ |+.||...... . .......+... +
T Consensus 155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~-~~~~~~~~~~~---~------ 217 (254)
T cd05083 155 -DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK------E-VKECVEKGYRM---E------ 217 (254)
T ss_pred -CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH------H-HHHHHhCCCCC---C------
Confidence 12234568999999988899999999999999999998 88887643221 1 11122221110 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.....+..+.+++.+||+.+|++||++.++++.|..
T Consensus 218 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 -PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 112234568899999999999999999999998853
No 262
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=7.9e-40 Score=299.57 Aligned_cols=257 Identities=27% Similarity=0.399 Sum_probs=202.7
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCC----
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGS---- 152 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~---- 152 (407)
..+++|++.+.||+|++|.||+|... +++.+++|.+.... .....+.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 35688999999999999999999874 57899999885432 3446788999999999 7999999999996544
Q ss_pred --eeEEEEEeccCCChhHHHhccC--CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecc
Q 040557 153 --QRLLVYEYMKNRSLDLLIYGES--DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDF 228 (407)
Q Consensus 153 --~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 228 (407)
..++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCC
Confidence 4899999999999999886433 456899999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCCCcccccccccCccccCcccccc-----CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHH
Q 040557 229 GLARFFPEDQAYLSTNFAGTLGYTAPEYAIR-----GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKL 303 (407)
Q Consensus 229 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~ 303 (407)
|++........ ......|+..|+|||.+.. ..++.++||||||+++++|++|+.||...... ......
T Consensus 158 ~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~ 230 (275)
T cd06608 158 GVSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM------RALFKI 230 (275)
T ss_pred ccceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH------HHHHHh
Confidence 99976543322 1233568899999998753 34678999999999999999999998643211 111111
Q ss_pred HHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 304 YERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 304 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+. .+.+. ........+.+++.+||..||++|||+.+++++-|
T Consensus 231 -~~~~-----~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 231 -PRNP-----PPTLK---SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred -hccC-----CCCCC---chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 1111 11111 12224567889999999999999999999998754
No 263
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.4e-39 Score=304.46 Aligned_cols=263 Identities=21% Similarity=0.276 Sum_probs=188.5
Q ss_pred CCeeeccCCccEEEEEec---CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeee--cCCeeEEEEEec
Q 040557 87 GNLLGRGGFGPVYRGKLA---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS--DGSQRLLVYEYM 161 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e~~ 161 (407)
+..||+|+||.||+|+.. ++..||+|.+.... ....+.+|+++++.++|+||+++++++. .....++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 368999999999999864 45789999885332 2235778999999999999999999884 355779999998
Q ss_pred cCCChhHHHhcc-------CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEE----cCCCceEEecccC
Q 040557 162 KNRSLDLLIYGE-------SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL----DEKFQSKIGDFGL 230 (407)
Q Consensus 162 ~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfgl 230 (407)
.+ +|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||+ ++++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 75 676665321 1235889999999999999999999998 9999999999999 5667999999999
Q ss_pred ccccCCCCcc--cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCch---hHHHHHHH
Q 040557 231 ARFFPEDQAY--LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYL---PEYAWKLY 304 (407)
Q Consensus 231 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~---~~~~~~~~ 304 (407)
++........ ......||+.|+|||.+.+ ..++.++|||||||++|||+||++||........... ........
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 9876543221 1234568999999998876 4579999999999999999999999865432211100 00000000
Q ss_pred H--------------hC-ccccccC----ccccc-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 305 E--------------RG-RILELVD----PRMRK-------EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 305 ~--------------~~-~~~~~~d----~~~~~-------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. .. ....... ..... ..........+.+++.+||+.||.+|||+.|+++|.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPY 316 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 0 00 0000000 00000 0000011245778999999999999999999998865
No 264
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.6e-40 Score=301.32 Aligned_cols=257 Identities=22% Similarity=0.348 Sum_probs=205.0
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|++.+.||.|+||.||+|... ++..+|+|.+... .......+.+|++++++++|+||+++++.+..+...++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 356888889999999999999864 6899999998543 34455678899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|..++... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 83 ~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 83 FCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred ccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 99999999988543 345899999999999999999999998 99999999999999999999999999876543322
Q ss_pred ccccccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 240 YLSTNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
......+++.|+|||.+. ...++.++||||||+++|||++|+.|+...... ..... ...+..
T Consensus 159 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~----- 225 (280)
T cd06611 159 -KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM------RVLLK-ILKSEP----- 225 (280)
T ss_pred -ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH------HHHHH-HhcCCC-----
Confidence 123356899999999875 345678999999999999999999998643221 11111 111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+.+. .+...+..+.+++..||+.+|++||++.+++++-|..
T Consensus 226 ~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 266 (280)
T cd06611 226 PTLD---QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVS 266 (280)
T ss_pred CCcC---CcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhc
Confidence 1111 1122345688999999999999999999999997754
No 265
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.9e-40 Score=302.41 Aligned_cols=267 Identities=25% Similarity=0.361 Sum_probs=204.0
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|++.+.||.|+||.||+|... +|+.||+|++..... ......+.+|+.++++++|+|++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778889999999999999864 689999999865442 33456788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+ +++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 9 999999886443 56899999999999999999999998 999999999999999999999999999877554322
Q ss_pred cccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCc------ccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR------ILELV 313 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 313 (407)
......++..|+|||.+.+. .++.++||||+|++++||++|++++....... .+ ........... ..++.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE--QL-AIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH--HH-HHHHHHcCCCChHHHhhccCcc
Confidence 22345688999999988654 46899999999999999999977775432211 00 00000000000 00000
Q ss_pred C------ccccc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 314 D------PRMRK---EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 314 d------~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
+ +.... ..........+.+++.+||+.+|++|||++++++|.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0 00000 00111234678999999999999999999999998653
No 266
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.3e-39 Score=295.96 Aligned_cols=253 Identities=26% Similarity=0.433 Sum_probs=200.8
Q ss_pred CCCCCCeeeccCCccEEEEEecC--CcEEEEEEecccc---------ChhhHHHHHHHHHHHHc-CCCCceeeeeeeeec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLAD--GTLVAVKKLCVDK---------SQQGESEFLSEVRMITS-IQHKNLVRLLGCCSD 150 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~---------~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 150 (407)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... ......++.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999998754 7889999875321 22334567788888875 699999999999999
Q ss_pred CCeeEEEEEeccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEec
Q 040557 151 GSQRLLVYEYMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGD 227 (407)
Q Consensus 151 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~D 227 (407)
.+..+++|||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||+|+||++++++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999988743 234568999999999999999999996 55 99999999999999999999999
Q ss_pred ccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC
Q 040557 228 FGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG 307 (407)
Q Consensus 228 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 307 (407)
||++....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...... ..+
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------~~~~~~-~~~ 228 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------SLATKI-VEA 228 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------HHHHHH-hhc
Confidence 99998765443 223456889999999999888999999999999999999999998643211 111111 111
Q ss_pred ccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 308 RILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 308 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
... + .. ....+..+.+++.+||+.||++||++.|+.+++.
T Consensus 229 ~~~----~-~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 VYE----P-LP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCC----c-CC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111 0 00 1122456889999999999999999999999875
No 267
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.5e-39 Score=295.07 Aligned_cols=250 Identities=28% Similarity=0.417 Sum_probs=203.0
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc----ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK----SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
+|+..+.||+|++|.||+|... +++.|++|.+.... .......+.+|+.+++.++|+||+++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999875 78999999985433 133456789999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
+||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999998543 45889999999999999999999998 999999999999999999999999999866443
Q ss_pred CcccccccccCccccCccccccCC-CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
. ......++..|++||.+.... ++.++|+||||+++|+|++|+.||...... .............
T Consensus 156 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~------ 221 (258)
T cd06632 156 S--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV------AAVFKIGRSKELP------ 221 (258)
T ss_pred c--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH------HHHHHHHhcccCC------
Confidence 3 123456889999999987776 899999999999999999999998643311 1111111101110
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
..+......+.+++.+||+.+|++||++.+++.+-
T Consensus 222 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~ 256 (258)
T cd06632 222 ----PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHP 256 (258)
T ss_pred ----CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCC
Confidence 11122345688999999999999999999999874
No 268
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-41 Score=318.10 Aligned_cols=252 Identities=29% Similarity=0.388 Sum_probs=207.0
Q ss_pred CCCCCCeeeccCCccEEEEEec--CCc--EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA--DGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.....++||+|.||.|++|.+. +|+ .||||.+..........+|++|+.+|.+|+|+|+++++|...+ ....+||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 3445678999999999999764 344 6899999766655567899999999999999999999999987 6788999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
|+++.|+|.+.++......+-......++.|||.||.||.+++ +|||||..+|+||-..-.+||+||||.+.+....
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999999998766677889999999999999999999998 9999999999999999999999999999886433
Q ss_pred c-c-cccccccCccccCccccccCCCCccccEEehhHHHHHHHhc-CCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 239 A-Y-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISC-RKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 239 ~-~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
. + ......-...|+|||.+....++.+||||+|||++|||+|+ ..||-+-.+. .+.+.+|.
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~----------------qIL~~iD~ 330 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI----------------QILKNIDA 330 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----------------HHHHhccc
Confidence 2 2 22344566789999999999999999999999999999985 4566543221 22333342
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.-+- ..+..++.++++++..||..+|.+|||+..|.+.+
T Consensus 331 ~erL-pRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 331 GERL-PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred cccC-CCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 1111 23455788999999999999999999999997543
No 269
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.4e-39 Score=292.38 Aligned_cols=251 Identities=24% Similarity=0.427 Sum_probs=204.2
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||+|+||.||++.. .++..+|+|.+.... .......+.+|+++++.++|+|++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477788999999999999975 468899999986543 334456789999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC-CceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK-FQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgla~~~~~~~~ 239 (407)
+++++|.+++.......+++..+..++.+++.|+.|||+.+ ++|+||+|+||+++++ +.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 99999999997655666899999999999999999999988 9999999999999855 4689999999987654332
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.|+...... ........ +....
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~~~-~~~~~-------- 220 (256)
T cd08220 158 --AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP------ALVLKIMS-GTFAP-------- 220 (256)
T ss_pred --ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH------HHHHHHHh-cCCCC--------
Confidence 22356889999999999888999999999999999999999998643221 11111111 11110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.+...+..+.+++.+||+.+|++|||+.|++++-
T Consensus 221 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 221 --ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred --CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 1112345688999999999999999999999873
No 270
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.9e-39 Score=296.52 Aligned_cols=253 Identities=26% Similarity=0.422 Sum_probs=204.2
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC---CCceeeeeeeeecCCeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ---HKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 158 (407)
.|+..+.||+|+||.||+|.. .+++.||+|.+...........+.+|+.+++.++ |+|++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 466778899999999999985 5789999999865544555667889999999986 999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++++|.+++... .+++.....++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999988532 5899999999999999999999998 9999999999999999999999999998775443
Q ss_pred cccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. .....|+..|+|||.+.++ .++.++||||||+++|+|++|+.||........ .. .... ...+.+
T Consensus 156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~~-~~~~-----~~~~~~ 222 (277)
T cd06917 156 SK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------MM-LIPK-----SKPPRL 222 (277)
T ss_pred cc-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------hh-cccc-----CCCCCC
Confidence 22 2345688999999988754 568999999999999999999999864322110 00 0000 011111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
... ..+..+.+++.+||+.||++||++.+++.+-+..
T Consensus 223 ~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~ 259 (277)
T cd06917 223 EDN----GYSKLLREFVAACLDEEPKERLSAEELLKSKWIK 259 (277)
T ss_pred Ccc----cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhh
Confidence 111 1345688999999999999999999999987764
No 271
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.4e-39 Score=299.14 Aligned_cols=249 Identities=26% Similarity=0.304 Sum_probs=205.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||++... +++.||+|.+.... .......+.+|++++++++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46788899999999999999864 68999999986432 2234567889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999998543 56899999999999999999999988 999999999999999999999999999876544
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... .........+.. .
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~------~-- 216 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-------IQIYEKILEGKV------R-- 216 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCc------c--
Confidence 2345688999999999888899999999999999999999999864331 111111111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTC 357 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~ 357 (407)
.+......+.+++.+||+.||.+|| +++|++++.+.
T Consensus 217 ---~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~ 257 (290)
T cd05580 217 ---FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257 (290)
T ss_pred ---CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccc
Confidence 1112245688999999999999999 88999988664
No 272
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.3e-39 Score=295.35 Aligned_cols=257 Identities=24% Similarity=0.355 Sum_probs=200.7
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC---------hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS---------QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 152 (407)
+|...+.||+|+||.||+|.. .+|+.+|+|.+..... ....+.+.+|+.+++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999975 4689999998853211 112346788999999999999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..++||||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999998544 46899999999999999999999988 9999999999999999999999999998
Q ss_pred ccCCCCcc-cccccccCccccCccccccCC--CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc
Q 040557 233 FFPEDQAY-LSTNFAGTLGYTAPEYAIRGE--LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI 309 (407)
Q Consensus 233 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (407)
........ ......++..|+|||.+.... ++.++|+||||+++||+++|..|+...... ........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-~~~ 229 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI------AAMFKLGN-KRS 229 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH------HHHHHhhc-ccc
Confidence 65432211 123356888999999887654 789999999999999999999998532111 11111111 111
Q ss_pred ccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 310 LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
...++... ....+..+.+++.+||+.+|++|||+.+|++|.+
T Consensus 230 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 230 APPIPPDV-----SMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred CCcCCccc-----cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 11111111 1123467889999999999999999999998854
No 273
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-41 Score=314.03 Aligned_cols=254 Identities=22% Similarity=0.360 Sum_probs=203.0
Q ss_pred CCCCCeeeccCCccEEEEEecCCcE-EEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 84 FHPGNLLGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~~~~~-vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
|.+...||-|+||.||+|..++... .|.|.+. ..+....++++-|+++|+.++||+||++++.|.-.+.+|++.|||.
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIe-tkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIE-TKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhc-ccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 3444569999999999998765444 4556653 4456677889999999999999999999999988999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
||-.+.++... +..|++..+.-+++|++.||.|||+++ |||||||..|||++-+|.++|+|||.+...... ....
T Consensus 113 GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~qkR 187 (1187)
T KOG0579|consen 113 GGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQKR 187 (1187)
T ss_pred CchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhH-Hhhh
Confidence 99998887543 456999999999999999999999998 999999999999999999999999999654322 2233
Q ss_pred cccccCccccCcccccc-----CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 243 TNFAGTLGYTAPEYAIR-----GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
..+.|||.|||||+++. .+|+.++||||||++|.||..+.+|...-.+. ..+.+. .... .|.+
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM------RVllKi-aKSe-----PPTL 255 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKI-AKSE-----PPTL 255 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH------HHHHHH-hhcC-----CCcc
Confidence 46899999999998764 57999999999999999999999886543321 111111 1111 1222
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. .+......+.+++..||..||+.||++.++++|.+.-
T Consensus 256 l---qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 256 L---QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred c---CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 2 2345667789999999999999999999999998743
No 274
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-40 Score=282.45 Aligned_cols=261 Identities=23% Similarity=0.301 Sum_probs=209.6
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccCh-------hhHHHHHHHHHHHHcC-CCCceeeeeee
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQ-------QGESEFLSEVRMITSI-QHKNLVRLLGC 147 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l-~h~niv~l~~~ 147 (407)
-+...++|...+.||.|..+.|-+... .+|+.+|+|++...... .-.+.-.+|+.+|+++ .||+|+.+.++
T Consensus 12 a~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 12 AKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred HhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 345567788889999999999988864 46889999998643211 1234456899999998 69999999999
Q ss_pred eecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEec
Q 040557 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGD 227 (407)
Q Consensus 148 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~D 227 (407)
|+.+...++|+|.|+.|.|.+++.. .-.+++....+|+.|+.+|++|||..+ |+||||||+|||+|++.+++|+|
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence 9999999999999999999999953 345899999999999999999999998 99999999999999999999999
Q ss_pred ccCccccCCCCcccccccccCccccCcccccc------CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHH
Q 040557 228 FGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR------GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 228 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~ 301 (407)
||+++.+...... ...+|||+|+|||.+.. ..|+..+|.|++||++|.|+.|.+||-..- .-...
T Consensus 167 FGFa~~l~~GekL--relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-------QmlML 237 (411)
T KOG0599|consen 167 FGFACQLEPGEKL--RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-------QMLML 237 (411)
T ss_pred cceeeccCCchhH--HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-------HHHHH
Confidence 9999988766543 56899999999998864 357889999999999999999999984210 00112
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+++.+|+.. ...+ .-.+......+++.+||+.||.+|.|.+|+++|.++.
T Consensus 238 R~ImeGkyq------F~sp-eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 238 RMIMEGKYQ------FRSP-EWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred HHHHhcccc------cCCc-chhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 223333211 1111 1123455678999999999999999999999998763
No 275
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.1e-39 Score=293.83 Aligned_cols=254 Identities=26% Similarity=0.384 Sum_probs=197.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc----ChhhHHHHHHHHHHHHcCCCCceeeeeeeeec--CCee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK----SQQGESEFLSEVRMITSIQHKNLVRLLGCCSD--GSQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 154 (407)
.+|+..+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999864 58999999885432 12334568899999999999999999998865 3567
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++++||+++++|.+++... ..+++.....++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 8999999999999998543 34889999999999999999999988 999999999999999999999999999865
Q ss_pred CCCCcc--cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 235 PEDQAY--LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 235 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
...... ......++..|+|||.+.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~------~~~~~~~~~~----- 225 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM------AAIFKIATQP----- 225 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH------HHHHHHhcCC-----
Confidence 432111 112345888999999999888999999999999999999999998643211 1111111100
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+. .+......+.+++ .||..+|++||+++||++|-+.
T Consensus 226 ~~~~-----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~ 264 (266)
T cd06651 226 TNPQ-----LPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFA 264 (266)
T ss_pred CCCC-----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCccc
Confidence 0111 1222334456666 6888999999999999988653
No 276
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.5e-39 Score=291.41 Aligned_cols=255 Identities=27% Similarity=0.389 Sum_probs=208.8
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++|++.+.||+|++|.||+|... +++.|++|++...........+.+|++.+.+++|+|++++++++......++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999875 59999999987654445567899999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
+++++|.+++... ..+++..+..++.|+++|+.|||+ .+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999998643 568999999999999999999999 88 99999999999999999999999999987654433
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. .....++..|+|||.+.+..++.++|+||||+++|+|++|+.|+....... ......... .... +.
T Consensus 156 ~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~-~~~~-----~~--- 222 (264)
T cd06623 156 Q-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAIC-DGPP-----PS--- 222 (264)
T ss_pred c-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHHh-cCCC-----CC---
Confidence 2 123467889999999999999999999999999999999999986543211 111111111 1110 11
Q ss_pred CCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 320 EGIVER-DALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 320 ~~~~~~-~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.... .+..+.+++.+||+.+|++||++.+++++-+
T Consensus 223 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~ 258 (264)
T cd06623 223 --LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPF 258 (264)
T ss_pred --CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHH
Confidence 1111 3467899999999999999999999999754
No 277
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.3e-39 Score=293.87 Aligned_cols=255 Identities=28% Similarity=0.447 Sum_probs=203.9
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|...+.||+|+||.||+|... +++.|++|.+...... .....+.+|+++++.++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999854 6899999998655432 4567889999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++... ..+++..+..++.+++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999998543 45789999999999999999999998 999999999999999999999999999877544332
Q ss_pred ccc---ccccCccccCccccccCC---CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 241 LST---NFAGTLGYTAPEYAIRGE---LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 241 ~~~---~~~gt~~y~aPE~~~~~~---~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
... ...++..|+|||.+.+.. ++.++||||||+++||+++|+.||...... ....... ..+. .
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-----~~~~~~~-~~~~-----~ 224 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-----FQIMFHV-GAGH-----K 224 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-----HHHHHHH-hcCC-----C
Confidence 211 356788999999988766 899999999999999999999998643211 0111111 1010 1
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+.+.. .......+.+++.+||+.+|++|||+.+++.+-|
T Consensus 225 ~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 225 PPIPD---SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred CCCCc---ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 11111 1112456789999999999999999999987643
No 278
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.4e-39 Score=300.05 Aligned_cols=255 Identities=28% Similarity=0.423 Sum_probs=200.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCc----EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
++|+..+.||+|+||.||+|... +|. .||+|.+...........+.+|+.+++.++|+||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45677789999999999999753 444 57899886554445556789999999999999999999998754 4678
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
++||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccC
Confidence 999999999999986433 35889999999999999999999988 99999999999999999999999999987654
Q ss_pred CCccc-ccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 237 DQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 237 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |+.|+..... .........+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~---- 230 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-------REIPDLLEKGERL---- 230 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHCCCCC----
Confidence 33221 122345678999999988899999999999999999997 8888754321 1112222222111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. ........+.+++..||..+|++||++.++++.|...
T Consensus 231 ---~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 231 ---P---QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred ---C---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 1111345688999999999999999999999998754
No 279
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.6e-39 Score=292.03 Aligned_cols=238 Identities=26% Similarity=0.431 Sum_probs=187.6
Q ss_pred CeeeccCCccEEEEEecCCc-----------EEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 88 NLLGRGGFGPVYRGKLADGT-----------LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
+.||+|+||.||+|.+.+.. .+++|.+..... ....+.+|+.+++.++|+||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh--hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 36899999999999875432 578887643322 25788899999999999999999999988 77899
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-------ceEEeccc
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-------QSKIGDFG 229 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-------~~kl~Dfg 229 (407)
||||+++|+|.+++..... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||
T Consensus 78 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence 9999999999999865432 6899999999999999999999988 99999999999999887 79999999
Q ss_pred CccccCCCCcccccccccCccccCccccccC--CCCccccEEehhHHHHHHHhc-CCCCCCCCCcccCchhHHHHHHHHh
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRG--ELSEKADIYSFGVLVLEIISC-RKNTDLTLPSEMQYLPEYAWKLYER 306 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~ 306 (407)
++...... ....++..|+|||++.+. .++.++||||||+++|||++| ..|+....... . ...+..
T Consensus 154 ~a~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~------~-~~~~~~ 221 (259)
T cd05037 154 IPITVLSR-----EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE------K-ERFYQD 221 (259)
T ss_pred cccccccc-----cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh------H-HHHHhc
Confidence 99865431 224567789999998876 789999999999999999995 55554332111 0 011111
Q ss_pred CccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 307 GRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 307 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.. .... .....+.+++.+||+.+|++|||+.++++.|.
T Consensus 222 ~~-------~~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 QH-------RLPM-----PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CC-------CCCC-----CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 10 0000 01156889999999999999999999998873
No 280
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.6e-39 Score=296.77 Aligned_cols=258 Identities=25% Similarity=0.367 Sum_probs=199.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHH-HHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRM-ITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|++.+.||+|+||.||+|... +|+.||+|++...........+..|+.. ++.++|+||+++++++...+..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46788899999999999999864 6999999998755444445566677765 556689999999999999999999999
Q ss_pred eccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhcccccc-CCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 160 YMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHED-SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 160 ~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
|++ |+|..++... ....+++..+..++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 5787776432 235689999999999999999999986 6 99999999999999999999999999986643
Q ss_pred CCcccccccccCccccCcccccc----CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIR----GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
... .....++..|+|||.+.+ ..++.++|+||||+++|||++|+.|+...... ......... +.
T Consensus 157 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~-~~---- 224 (283)
T cd06617 157 SVA--KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-----FQQLKQVVE-EP---- 224 (283)
T ss_pred ccc--cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-----HHHHHHHHh-cC----
Confidence 221 123467889999998764 45688999999999999999999998532111 011111111 10
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
.+... ....+..+.+++.+||+.+|++||++.+++++-+....
T Consensus 225 -~~~~~----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 225 -SPQLP----AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred -CCCCC----ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 11111 11234568899999999999999999999998776543
No 281
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=7.7e-40 Score=302.64 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=200.5
Q ss_pred CCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCC
Q 040557 87 GNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
...||+|+||.||++... ++..||||.+... .......+.+|+..++.++|+||+++++.+..++..++||||+++++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR-KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecc-hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 457999999999999864 6889999988533 33445678899999999999999999999999999999999999999
Q ss_pred hhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccccc
Q 040557 166 LDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245 (407)
Q Consensus 166 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 245 (407)
|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........ .....
T Consensus 106 L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~ 178 (292)
T cd06658 106 LTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKSL 178 (292)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCcee
Confidence 9998743 34899999999999999999999998 99999999999999999999999999976543322 12235
Q ss_pred ccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHH
Q 040557 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVER 325 (407)
Q Consensus 246 ~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 325 (407)
.|+..|+|||.+.+..++.++||||||+++|||++|+.||....+.. .... .. ..+.+.... ...
T Consensus 179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~~~~-~~-----~~~~~~~~~---~~~ 243 (292)
T cd06658 179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ------AMRR-IR-----DNLPPRVKD---SHK 243 (292)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHH-HH-----hcCCCcccc---ccc
Confidence 68899999999988889999999999999999999999986432211 1111 11 011111111 112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 326 DALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 326 ~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
....+.+++.+||+.||++|||+.+++++-+...
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 3446788999999999999999999999977654
No 282
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-39 Score=331.00 Aligned_cols=259 Identities=20% Similarity=0.323 Sum_probs=201.2
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeec--CCeeE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSD--GSQRL 155 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 155 (407)
..++|++.+.||+|+||.||+|... ++..||+|.+.... .......|..|+.++..++||||+++++++.+ ...+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4478999999999999999999864 57789999886443 33445678999999999999999999998854 45689
Q ss_pred EEEEeccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCC----CceeeeccccccEEEcCC---------
Q 040557 156 LVYEYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSH----TRIVHRDIKASNVLLDEK--------- 220 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~i~H~dlk~~Nill~~~--------- 220 (407)
+||||+++|+|.+++... ....+++..++.|+.||+.||.|||+.+. .+|+||||||+||||+.+
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999999999988642 23469999999999999999999998542 249999999999999642
Q ss_pred --------CceEEecccCccccCCCCcccccccccCccccCcccccc--CCCCccccEEehhHHHHHHHhcCCCCCCCCC
Q 040557 221 --------FQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR--GELSEKADIYSFGVLVLEIISCRKNTDLTLP 290 (407)
Q Consensus 221 --------~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~ 290 (407)
+.+||+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||+||||+||+.||.....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccCCCCceEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 3489999999987644322 234579999999998864 4589999999999999999999999864321
Q ss_pred cccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 291 SEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
... ....+..+ +.+.. ...+..+.+|+..||+.+|.+||++.+++.+-+.
T Consensus 249 -----~~q-li~~lk~~-------p~lpi----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i 298 (1021)
T PTZ00266 249 -----FSQ-LISELKRG-------PDLPI----KGKSKELNILIKNLLNLSAKERPSALQCLGYQII 298 (1021)
T ss_pred -----HHH-HHHHHhcC-------CCCCc----CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence 111 11111111 11110 1124568899999999999999999999976554
No 283
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.4e-39 Score=296.29 Aligned_cols=258 Identities=23% Similarity=0.367 Sum_probs=207.2
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|.+.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|||++++++.+...+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 36788889999999999999975 468899999985332 3334678899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 97 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 97 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred cCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999999853 24789999999999999999999998 99999999999999999999999999876654332
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. .....+++.|+|||.+.+..++.++||||||+++|++++|+.||......... ......+. +..
T Consensus 171 ~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~------~~~~~~~~------~~~-- 235 (293)
T cd06647 171 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNGT------PEL-- 235 (293)
T ss_pred c-cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe------eehhcCCC------CCC--
Confidence 2 23346888999999998888999999999999999999999999654322110 00000000 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
.........+.+++.+||+.+|++||++.+++.|-+.....
T Consensus 236 -~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 236 -QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 01122345688999999999999999999999998765444
No 284
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.2e-39 Score=299.57 Aligned_cols=265 Identities=22% Similarity=0.298 Sum_probs=198.5
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
+++|.+.+.||+|+||.||+|.. .+|+.||+|.+...........+.+|+.+++.++|+||+++.+++..+...++|||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 46788899999999999999975 46899999998654433444567899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+. +++..++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.......
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 84 YMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred ccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 996 5776665433 245788888999999999999999998 99999999999999999999999999976433221
Q ss_pred ccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-C----------
Q 040557 240 YLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-G---------- 307 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~---------- 307 (407)
. .....+++.|+|||.+.+. .++.++||||||+++|||++|+.||....... +.....+.. +
T Consensus 159 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07870 159 T-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-----EQLEKIWTVLGVPTEDTWPGV 232 (291)
T ss_pred C-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-----HHHHHHHHHcCCCChhhhhhh
Confidence 1 1234578899999988764 57889999999999999999999987543211 111111000 0
Q ss_pred -ccc----cccCc----ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 308 -RIL----ELVDP----RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 308 -~~~----~~~d~----~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
... +.... ..............+.+++.+|++.||++|||+.|++.|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 000 00000 00000000011346789999999999999999999998754
No 285
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=301.18 Aligned_cols=254 Identities=27% Similarity=0.343 Sum_probs=212.6
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
+.|+.-++||+||||.||-++. .+|+.+|.|++.+.. ....+...++|-.+|.+++.+.||.+-..|+..+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5688888999999999999874 469999999986543 3455667789999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
..|.||+|..++++..+..+++..+..++.+|+.||++||+.. ||.|||||+|||||+.|+++|+|+|||..+....
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 9999999999999888888999999999999999999999998 9999999999999999999999999999887665
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
.. ...+||.+|||||++.+..|+...|.||+||+||||+.|+.||...-.. .. .+.+|.+..
T Consensus 342 ~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK-------vk---------~eEvdrr~~ 403 (591)
T KOG0986|consen 342 PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK-------VK---------REEVDRRTL 403 (591)
T ss_pred cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-------hh---------HHHHHHHHh
Confidence 43 3458999999999999999999999999999999999999998632111 11 112222221
Q ss_pred --cCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhh
Q 040557 319 --KEGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLT 356 (407)
Q Consensus 319 --~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~ 356 (407)
...+++..+.+..+|....|+.||++|.. +.+|.+|.-
T Consensus 404 ~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hpf 448 (591)
T KOG0986|consen 404 EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPF 448 (591)
T ss_pred cchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcc
Confidence 12344556667888888899999999975 557766543
No 286
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-40 Score=304.21 Aligned_cols=255 Identities=20% Similarity=0.330 Sum_probs=203.7
Q ss_pred HhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccc-cChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 157 (407)
....|++.++||+||.+.||++...+...||+|++... .+.+...-|.+|+..|.++ .|.+|+++++|-..++.+|+|
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 34568889999999999999999888888999887543 3555667899999999999 599999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||=+ -+|..++.........| .+..+..|++.|+.++|+++ |||.||||.|+|+-.+ .+||+|||+|..+..+
T Consensus 439 mE~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVkG-~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 439 MECGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVKG-RLKLIDFGIANAIQPD 512 (677)
T ss_pred eeccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEee-eEEeeeechhcccCcc
Confidence 99864 48999997666555556 66778999999999999999 9999999999999765 9999999999988766
Q ss_pred Ccc-cccccccCccccCccccccCC-----------CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH
Q 040557 238 QAY-LSTNFAGTLGYTAPEYAIRGE-----------LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE 305 (407)
Q Consensus 238 ~~~-~~~~~~gt~~y~aPE~~~~~~-----------~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 305 (407)
... .....+||..||+||.+.... .+.+|||||+||+||+|+.|++||..- ....
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--------~n~~----- 579 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--------INQI----- 579 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--------HHHH-----
Confidence 543 334678999999999886432 457999999999999999999998621 1111
Q ss_pred hCccccccCcccccC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 306 RGRILELVDPRMRKE--GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 306 ~~~~~~~~d~~~~~~--~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.++..+.||...-+ ..+. ...+++++..||+.||.+|||..++++|--
T Consensus 580 -aKl~aI~~P~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eLLqhpF 629 (677)
T KOG0596|consen 580 -AKLHAITDPNHEIEFPDIPE--NDELIDVMKCCLARDPKKRWSIPELLQHPF 629 (677)
T ss_pred -HHHHhhcCCCccccccCCCC--chHHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence 12333444433111 1111 123899999999999999999999999853
No 287
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6e-39 Score=294.52 Aligned_cols=251 Identities=25% Similarity=0.394 Sum_probs=204.1
Q ss_pred CCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 84 FHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
|+..+.||+|+||.||+|.. .+++.||+|.+...........+.+|+.++..++|+||+++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 55678899999999999975 46889999998655444556678899999999999999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+++|..++.. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++........ ..
T Consensus 86 ~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-~~ 158 (277)
T cd06641 86 GGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KR 158 (277)
T ss_pred CCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh-hh
Confidence 9999998853 34899999999999999999999988 99999999999999999999999999976644322 12
Q ss_pred cccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
....++..|+|||.+.+..++.++|+|||||++|+|++|..|+...... .... ....+.. +. .
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~-~~~~~~~-----~~-----~ 221 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM------KVLF-LIPKNNP-----PT-----L 221 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH------HHHH-HHhcCCC-----CC-----C
Confidence 2346788999999998888999999999999999999999998643211 1111 1111110 11 1
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 323 VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
....+..+.+++.+||+.+|++||++.+++++-+..
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~ 257 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIV 257 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence 122345688999999999999999999999986544
No 288
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.8e-39 Score=300.94 Aligned_cols=256 Identities=21% Similarity=0.249 Sum_probs=200.1
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|+..+.||+|+||.||++... +++.||+|.+..... ......+.+|+++++.++|+||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36788899999999999999864 578999999865432 233457889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.++|+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999998543 45899999999999999999999988 9999999999999999999999999987421110
Q ss_pred --------------cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHH
Q 040557 239 --------------AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLY 304 (407)
Q Consensus 239 --------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 304 (407)
........++..|+|||.+.+..++.++|+||||+++|||++|+.||...... ..... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~-~ 228 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQ-V 228 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHH-H
Confidence 00111245788999999998888999999999999999999999998643221 11111 1
Q ss_pred HhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHhhc
Q 040557 305 ERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP---MSEIVAMLTC 357 (407)
Q Consensus 305 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~ev~~~l~~ 357 (407)
..+.. ..+.. ....+..+.+++.+||+.+|++||+ +.+++++.+.
T Consensus 229 ~~~~~---~~~~~-----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~ 276 (305)
T cd05609 229 ISDDI---EWPEG-----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF 276 (305)
T ss_pred Hhccc---CCCCc-----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccc
Confidence 11110 01111 0123456889999999999999998 5666666544
No 289
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.7e-39 Score=292.16 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=203.6
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC-----hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS-----QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 156 (407)
+|+..+.||+|++|.||+|.. .+++.||+|.+..... ......+.+|+.+++.++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999985 5689999999864331 1234678899999999999999999999999999999
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-ceEEecccCccccC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-QSKIGDFGLARFFP 235 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~ 235 (407)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++ .++|+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 9999999999999854 345889999999999999999999998 99999999999998765 59999999998765
Q ss_pred CCCcc---cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 236 EDQAY---LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 236 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
..... ......++..|+|||.+.+..++.++||||+|+++++|++|..|+........ ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~------ 226 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFKIASA------ 226 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHHHhcc------
Confidence 43211 11234678899999999888899999999999999999999999864322111 1111111000
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
......+......+.+++.+||+.+|++||++.+++.+-+
T Consensus 227 ----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~ 266 (268)
T cd06630 227 ----TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPV 266 (268)
T ss_pred ----CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcc
Confidence 0011123345567889999999999999999999998754
No 290
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.2e-39 Score=292.45 Aligned_cols=253 Identities=25% Similarity=0.329 Sum_probs=198.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc----ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--Cee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK----SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 154 (407)
.+|++.+.||+|+||.||.|... +|+.||+|.+.... .......+.+|+.++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999864 58999999875332 123345788999999999999999999988663 467
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
+++|||+++++|.+++... ..+++....+++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 8999999999999988543 34788999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCcc--cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 235 PEDQAY--LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 235 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
...... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~----- 225 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQP----- 225 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH------HHHHHHhcCC-----
Confidence 422111 112345888999999998888999999999999999999999998642111 1111111000
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+......+.+++.+|+. +|++||++++|+++.+
T Consensus 226 -----~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~ 263 (265)
T cd06652 226 -----TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTF 263 (265)
T ss_pred -----CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcc
Confidence 0111233345567889999985 9999999999998764
No 291
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.9e-39 Score=297.57 Aligned_cols=263 Identities=24% Similarity=0.375 Sum_probs=200.4
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||.|++|.||+|+.. +|+.||||.+..... ......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778889999999999999864 689999998864432 22335788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+. ++|..++.......+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 96 68888887655667899999999999999999999988 999999999999999999999999999865433221
Q ss_pred cccccccCccccCccccccCC-CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-CccccccC----
Q 040557 241 LSTNFAGTLGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-GRILELVD---- 314 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d---- 314 (407)
.....++..|+|||.+.+.. ++.++||||||+++|||+||+.||....... ...+.... +.....+.
T Consensus 157 -~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 157 -YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID------QLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred -cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHHHhCCCChhhhhhhh
Confidence 12335688999999887644 6889999999999999999999986432211 11111100 00000000
Q ss_pred ---------cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 315 ---------PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 315 ---------~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+..... .........+.+++.+||+.||++|||+.+++++-|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 283 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCC
Confidence 000000 000112345789999999999999999999998754
No 292
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.1e-39 Score=296.36 Aligned_cols=240 Identities=25% Similarity=0.385 Sum_probs=187.1
Q ss_pred CeeeccCCccEEEEEecC--------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 88 NLLGRGGFGPVYRGKLAD--------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
+.||+|+||.||+|.... ...+|+|.+... .....+.+.+|+.++..++|+|++++++++..+...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch-hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 369999999999997532 234888877432 23445678899999999999999999999999899999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc--------eEEecccCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ--------SKIGDFGLA 231 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~--------~kl~Dfgla 231 (407)
|+++|+|..++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++. ++++|||++
T Consensus 80 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 80 YVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred cCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence 999999999986543 35899999999999999999999998 999999999999987765 699999998
Q ss_pred cccCCCCcccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcC-CCCCCCCCcccCchhHHHHHHHHhCcc
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCR-KNTDLTLPSEMQYLPEYAWKLYERGRI 309 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (407)
...... ....++..|+|||.+.+. .++.++||||||+++|||++|. .|+....+.. ........
T Consensus 156 ~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-------~~~~~~~~-- 221 (258)
T cd05078 156 ITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-------KLQFYEDR-- 221 (258)
T ss_pred cccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-------HHHHHHcc--
Confidence 755432 234578899999998874 5799999999999999999995 4433211110 01111110
Q ss_pred ccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 310 LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.. .+.....++.+++.+||+.||++|||++++++.|+
T Consensus 222 -----~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -----HQ-----LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -----cc-----CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 11112346889999999999999999999999873
No 293
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.7e-39 Score=297.81 Aligned_cols=267 Identities=24% Similarity=0.341 Sum_probs=201.8
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh----hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ----QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
+|+..+.||+|+||.||+|... +|+.||+|.+...... .....+..|+++++.++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4677789999999999999864 6899999998654322 2344567899999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+ +|+|..++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999986443 36899999999999999999999998 999999999999999999999999999876543
Q ss_pred CcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH---------hC
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE---------RG 307 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~ 307 (407)
... .....++..|+|||.+.+ ..++.++|||||||+++||++|.++|......+. +... ..... ..
T Consensus 156 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 156 NRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ--LGKI-FEALGTPTEENWPGVT 231 (298)
T ss_pred Ccc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH--HHHH-HHHcCCCchhhhhhcc
Confidence 221 122356788999998865 4678999999999999999999777654332110 0000 00000 00
Q ss_pred ccccccCcc----cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 308 RILELVDPR----MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 308 ~~~~~~d~~----~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
......... .............+.+++.+||+.+|++|||+.|++++-+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 000000000 000001122346788999999999999999999999987654
No 294
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.4e-39 Score=297.79 Aligned_cols=258 Identities=23% Similarity=0.354 Sum_probs=198.3
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|...+.||+|+||.||++... +|+.||+|.+...........+.+|+.++.++. |+||+++++++......+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3444567999999999999854 689999999875544455667899999999995 99999999999998999999999
Q ss_pred ccCCChhHH---HhccCCCCCCHHHHHHHHHHHHHHhcccccc-CCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 161 MKNRSLDLL---IYGESDKFLNWSTRFQIILGIARGLQYLHED-SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 161 ~~~g~L~~~---l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
+.. ++..+ +.......+++..+..++.|++.||+|||+. + ++||||||+||++++++.++|+|||++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 864 54443 3333345689999999999999999999974 6 99999999999999999999999999976543
Q ss_pred CCcccccccccCccccCccccccC---CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIRG---ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
.... ....|+..|+|||.+.+. .++.++|||||||++|||++|+.||..... .......... +.
T Consensus 161 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~-~~----- 227 (288)
T cd06616 161 SIAK--TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQVVK-GD----- 227 (288)
T ss_pred CCcc--ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhhcC-CC-----
Confidence 3221 234588899999998776 689999999999999999999999864320 0011111100 00
Q ss_pred CcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 314 d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.+.+... .....+..+.+++.+||+.+|++|||+.+|+++-+..
T Consensus 228 ~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 271 (288)
T cd06616 228 PPILSNS-EEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271 (288)
T ss_pred CCcCCCc-CCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 1111111 1122455789999999999999999999999987653
No 295
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.6e-39 Score=295.62 Aligned_cols=258 Identities=24% Similarity=0.365 Sum_probs=207.8
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
..++|+..+.||+|++|.||+|... ++..+++|.+..... ....+.+|++.++.++|+|++++++++...+..++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 3466777789999999999999875 688999999864333 5567889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 95 e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 95 EYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred eccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 9999999999996543 36999999999999999999999988 9999999999999999999999999987654332
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. ......++..|++||.+.+..++.++||||||+++|+|++|+.|+....+.. .... ........ .
T Consensus 171 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~------~~~~-~~~~~~~~-----~- 236 (286)
T cd06614 171 S-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR------ALFL-ITTKGIPP-----L- 236 (286)
T ss_pred h-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH------HHHH-HHhcCCCC-----C-
Confidence 2 1223457889999999988889999999999999999999999986432211 1111 11111110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
......+..+.+++.+||+.+|.+||++.+++++.+...
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 237 --KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred --cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 011123456889999999999999999999999876544
No 296
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2e-39 Score=294.10 Aligned_cols=253 Identities=22% Similarity=0.379 Sum_probs=203.6
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||+|+||.||+|... +|..+|+|.+..... ......+.+|+++++.++|+||+++++++...+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777889999999999999864 588999999865321 23445778999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-ceEEecccCccccCCCCc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-QSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~~ 239 (407)
+++++|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++ .++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 99999999987655556899999999999999999999988 99999999999999875 469999999987654332
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. .....|++.|+|||...+..++.++|+||||+++|||++|+.|+..... ......... +... +
T Consensus 158 ~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~~~----~---- 221 (257)
T cd08225 158 L-AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKICQ-GYFA----P---- 221 (257)
T ss_pred c-ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhc-ccCC----C----
Confidence 1 2234588899999999888899999999999999999999999864321 112221111 1110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
........+.+++.+||+.+|++|||+.+++++.|
T Consensus 222 --~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~ 256 (257)
T cd08225 222 --ISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPF 256 (257)
T ss_pred --CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence 11122346889999999999999999999998754
No 297
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.7e-38 Score=289.05 Aligned_cols=252 Identities=25% Similarity=0.421 Sum_probs=203.5
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeec--CCeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSD--GSQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 158 (407)
+|++.+.||.|+||.||++.. .+|..+|+|.+.... .......+.+|+++++.++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477788999999999999975 468899999986433 34445678899999999999999999997753 45679999
Q ss_pred EeccCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhcccc-----ccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 159 EYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLH-----EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 159 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
||+++++|.+++... ....+++..++.++.|++.|+.||| +.+ ++|+||+|+||++++++.++|+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999998643 2456899999999999999999999 655 999999999999999999999999999
Q ss_pred cccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccc
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (407)
......... .....+++.|+|||.+.+..++.++||||||+++++|++|+.|+...... ........+...
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~- 228 (265)
T cd08217 158 KILGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL-------QLASKIKEGKFR- 228 (265)
T ss_pred ccccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH-------HHHHHHhcCCCC-
Confidence 877654431 23356899999999999888999999999999999999999998754311 111122221111
Q ss_pred ccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 312 ~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
..+...+..+.+++.+||+.+|++||++.+|+++-
T Consensus 229 ---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~ 263 (265)
T cd08217 229 ---------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263 (265)
T ss_pred ---------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence 12223456789999999999999999999999873
No 298
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.7e-40 Score=308.15 Aligned_cols=249 Identities=25% Similarity=0.392 Sum_probs=201.2
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEecc---ccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCe--eEEEEEec
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCV---DKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ--RLLVYEYM 161 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~~ 161 (407)
.+||+|+|-+||+|.+. +|..||.-.++. .......++|..|+.+|+.|+|+||++++.++.+... ..+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 57999999999999764 577887554433 2345556899999999999999999999999877655 67899999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc-CCCceEEecccCccccCCCCcc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
..|+|..|+... +.++......|+.||++||.|||++ .|||+|||||-+||||+ ..|.|||+|+|||........
T Consensus 126 TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a- 201 (632)
T KOG0584|consen 126 TSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA- 201 (632)
T ss_pred cCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcccc-
Confidence 999999999544 4588899999999999999999998 58899999999999998 558999999999998876554
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
...+|||.|||||+.. ..|++.+||||||++++||+|+..|+. +... +..+++.+..|.-...+..-
T Consensus 202 --ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs-----EC~n-~AQIYKKV~SGiKP~sl~kV---- 268 (632)
T KOG0584|consen 202 --KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS-----ECTN-PAQIYKKVTSGIKPAALSKV---- 268 (632)
T ss_pred --ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh-----hhCC-HHHHHHHHHcCCCHHHhhcc----
Confidence 2478999999999665 889999999999999999999998874 2222 23344445545433222111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
...++.+||.+|+.. .++|||+.|++.+--+..
T Consensus 269 -----~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 269 -----KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred -----CCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 134588999999999 999999999998754433
No 299
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.5e-39 Score=291.56 Aligned_cols=251 Identities=24% Similarity=0.282 Sum_probs=204.7
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
+|++.+.||.|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4777889999999999999865 58999999986433 22446788999999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+.+++|..++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence 99999999998543 46899999999999999999999988 99999999999999999999999999987654431
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.....|+..|+|||.+.+..++.++|+||||+++|+|++|+.|+....... .......... ..
T Consensus 156 --~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~-----------~~ 218 (258)
T cd05578 156 --TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET-----------AD 218 (258)
T ss_pred --ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc-----------cc
Confidence 233568889999999988889999999999999999999999987554321 1111111110 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCH--HHHHHHh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPM--SEIVAML 355 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~--~ev~~~l 355 (407)
...+...+..+.+++.+||+.||.+||++ .|++++-
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~ 256 (258)
T cd05578 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHP 256 (258)
T ss_pred ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCC
Confidence 11222234678899999999999999999 7777653
No 300
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.9e-38 Score=290.43 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=197.2
Q ss_pred CCCCCeeeccCCccEEEEEec----CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC------
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA----DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS------ 152 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 152 (407)
|++.+.||+|+||.||+|... ++..||+|.+.... .....+++.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999753 36889999986543 3345667889999999999999999999875432
Q ss_pred eeEEEEEeccCCChhHHHhccC----CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGES----DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDF 228 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 228 (407)
..++++||+.+|+|..++.... ...+++....+++.|++.|++|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 2478899999999988774321 224789999999999999999999988 999999999999999999999999
Q ss_pred cCccccCCCCcc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHHh
Q 040557 229 GLARFFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYER 306 (407)
Q Consensus 229 gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 306 (407)
|+++........ ......+++.|++||.+....++.++||||||+++|||++ |+.|+...... . .......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~------~-~~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS------E-IYNYLIK 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH------H-HHHHHHc
Confidence 999866433321 1223345678999999988889999999999999999999 77777533211 1 1111111
Q ss_pred CccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 307 GRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 307 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
+.. .. ........+.+++.+||+.+|++||++.++++.|+.
T Consensus 231 ~~~-------~~---~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 231 GNR-------LK---QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred CCc-------CC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 110 00 111234578999999999999999999999999874
No 301
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.1e-39 Score=290.81 Aligned_cols=248 Identities=23% Similarity=0.286 Sum_probs=201.1
Q ss_pred eeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
||.|++|.||+++.. +++.||+|.+..... ......+.+|+.+++.++|+||+++++.+.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999865 489999999865432 24456789999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~ 153 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFC 153 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccccc
Confidence 9998543 45899999999999999999999988 9999999999999999999999999998775543 122346
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
++..|++||.+.+..++.++|+||||+++|+|++|..|+....... ......... +. .....+...
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~-~~---------~~~~~~~~~ 219 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILK-GN---------GKLEFPNYI 219 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhc-cC---------CCCCCCccc
Confidence 8899999999988889999999999999999999999987543211 111111110 00 000112222
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhcc
Q 040557 327 ALQVINVAFICLQPHGNQRPP-----MSEIVAMLTCK 358 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~~ 358 (407)
+..+.+++.+||+.+|++||+ +.|+++|-|+.
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 256 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFN 256 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhh
Confidence 567899999999999999999 89999987753
No 302
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.3e-39 Score=299.16 Aligned_cols=248 Identities=23% Similarity=0.323 Sum_probs=199.3
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
..||+|+||.||+|... +++.||+|.+.... ......+.+|+.++..++|||++++++++..++..++++||+++++|
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 46999999999999864 68999999986433 23445688999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
..++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++........ ......
T Consensus 106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~~ 178 (297)
T cd06659 106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKSLV 178 (297)
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc-ccccee
Confidence 987743 34899999999999999999999998 99999999999999999999999999976544322 123356
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
|+..|+|||.+.+..++.++||||||+++|||++|+.||....+.+ ... ....... +... .....
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~-~~~~~~~-----~~~~---~~~~~ 243 (297)
T cd06659 179 GTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------AMK-RLRDSPP-----PKLK---NAHKI 243 (297)
T ss_pred cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH-HHhccCC-----CCcc---ccCCC
Confidence 8899999999998899999999999999999999999986432211 111 1111100 0000 01112
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 327 ALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
...+.+++.+||+.+|++||++.+++++.+..
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~ 275 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDHPFLL 275 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhChhhc
Confidence 34578999999999999999999999987654
No 303
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.5e-38 Score=296.25 Aligned_cols=253 Identities=28% Similarity=0.397 Sum_probs=200.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
+.|...+.||+|+||.||+|... +|+.||+|.+.... .......+.+|+++++.++|+|++++.+++.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45778889999999999999864 68999999885432 2334467889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+. |++.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 95 e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~ 169 (307)
T cd06607 95 EYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169 (307)
T ss_pred HhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence 9997 5666666432 345899999999999999999999988 9999999999999999999999999997654332
Q ss_pred cccccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 239 AYLSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
...++..|+|||.+. ...++.++||||||+++|||+||+.|+...... ...... ..+. .+
T Consensus 170 -----~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~------~~~~~~-~~~~-----~~ 232 (307)
T cd06607 170 -----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHI-AQND-----SP 232 (307)
T ss_pred -----CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH------HHHHHH-hcCC-----CC
Confidence 346788999999874 456889999999999999999999998543211 111111 1110 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
.. .....+..+.+++.+||+.+|++||++.+++.+.+....
T Consensus 233 ~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 233 TL----SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred CC----CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 11 112345678999999999999999999999999886543
No 304
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.6e-39 Score=295.56 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=199.3
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
|+..+.||.|++|.||+|... +|..||+|++...... .....+.+|+++++.++|+|++++++++.+++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999854 7999999998654322 23356889999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
+ ++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~- 155 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT- 155 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-
Confidence 5 68999886555456899999999999999999999988 999999999999999999999999999765432211
Q ss_pred ccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-Cccc---------
Q 040557 242 STNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-GRIL--------- 310 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~--------- 310 (407)
.....++..|+|||.+.+. .++.++||||||+++|+|++|+.||....... ........ +...
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID------QLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCChHHhhhhhh
Confidence 1223568899999987664 57899999999999999999999986432211 01111100 0000
Q ss_pred --cccC--ccccc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 311 --ELVD--PRMRK---EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 311 --~~~d--~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+... +.... .......+..+.+++.+||+.+|++|||++|++++-|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 282 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCC
Confidence 0000 00000 0011122356889999999999999999999998754
No 305
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.1e-39 Score=303.83 Aligned_cols=269 Identities=23% Similarity=0.320 Sum_probs=199.4
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC-----Cee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG-----SQR 154 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 154 (407)
.++|++.+.||+|+||.||+|.. .+|+.||+|.+...........+.+|+.+++.++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46789999999999999999975 468999999986433344456788999999999999999999887544 357
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++++||+.+ +|..++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~~-~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELMET-DLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhccc-CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeec
Confidence 999999975 7777763 235899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCcc--cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC---c
Q 040557 235 PEDQAY--LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG---R 308 (407)
Q Consensus 235 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~ 308 (407)
...... ......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ........... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~---~~~~~~~~~~~~~~~ 233 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ---LNLILGVLGTPSQED 233 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCCHHH
Confidence 432221 1123568899999998755 5689999999999999999999999864321100 00000000000 0
Q ss_pred cccccCc-------------ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 309 ILELVDP-------------RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 309 ~~~~~d~-------------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
...+.+. ..............+.+++.+||+.+|++|||+.+++++-+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 0000000 00000000112456889999999999999999999999976543
No 306
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-38 Score=286.90 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=204.4
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
.|+..+.||+|++|.||++... +++.+++|++..... .....+.+|++.++.++|+|++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 3677789999999999999875 689999999865433 45567899999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++++|.+++.... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 80 SGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 9999999986543 46899999999999999999999988 99999999999999999999999999987765432
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
.....++..|++||.+.+..++.++||||||+++++|++|+.|+....... .... ........ ..
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~-~~~~~~~~-----~~--- 218 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK------ALFK-IATNGPPG-----LR--- 218 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH------HHHH-HHhcCCCC-----cC---
Confidence 234568899999999988889999999999999999999999986432111 1111 11111110 00
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.....+..+.+++.+||+.||++|||+.+++++-
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~ 252 (253)
T cd05122 219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHP 252 (253)
T ss_pred cccccCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 0111245689999999999999999999999874
No 307
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.4e-38 Score=292.05 Aligned_cols=249 Identities=26% Similarity=0.318 Sum_probs=198.8
Q ss_pred eeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
||+|+||+||++.. .+|+.||+|.+.... .......+.+|+++++.++|+||+++.+.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999975 468999999986432 223345677899999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
.+++.......+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||++........ .....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK--IKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCCc--ccccc
Confidence 99987655557899999999999999999999998 99999999999999999999999999986644222 22346
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
++..|+|||.+.+..++.++||||||+++++|++|+.||........ .. ......... ....+...
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~----~~~~~~~~~-------~~~~~~~~ 221 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE---KE----ELKRRTLEM-------AVEYPDKF 221 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc---HH----HHHhccccc-------cccCCccC
Confidence 78899999999888899999999999999999999999864432110 00 011110000 00112223
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhc
Q 040557 327 ALQVINVAFICLQPHGNQRP-----PMSEIVAMLTC 357 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~ 357 (407)
+..+.+++.+||+.+|++|| ++.+++.|.+.
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~ 257 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLF 257 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHhChhh
Confidence 55688999999999999999 77778887665
No 308
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-39 Score=295.30 Aligned_cols=252 Identities=25% Similarity=0.323 Sum_probs=212.0
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.-|.+.+.||+|.|..|-+|++ -+|..||||++.+.+ .......+.+|++.|+.++|||||+++.+...+..+|||.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 3455567899999999999974 479999999997554 33445678899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc-CCCceEEecccCccccCCCC
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~ 238 (407)
.-++|+|.+++-... ..+++....+++.||+.|+.|+|+.. ++||||||+||.+- .-|-|||.|||++..+....
T Consensus 98 LGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~ 173 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK 173 (864)
T ss_pred ecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcc
Confidence 999999999996543 45999999999999999999999998 99999999999875 56889999999998887665
Q ss_pred cccccccccCccccCccccccCCCC-ccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELS-EKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~-~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. ++.+|...|-|||++.+..|+ +++||||||||||-|++|+.||......+. +.-++|-..
T Consensus 174 kL--~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET---------------LTmImDCKY 236 (864)
T KOG4717|consen 174 KL--TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET---------------LTMIMDCKY 236 (864)
T ss_pred hh--hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh---------------hhhhhcccc
Confidence 43 567999999999999999886 578999999999999999999976544432 111222222
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+.....+..+||..||+.||.+|.+.++|+.+-|.
T Consensus 237 ---tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wl 273 (864)
T KOG4717|consen 237 ---TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWL 273 (864)
T ss_pred ---cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccc
Confidence 2455667788999999999999999999999988774
No 309
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.4e-38 Score=293.37 Aligned_cols=252 Identities=22% Similarity=0.333 Sum_probs=202.1
Q ss_pred CCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 84 FHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
|...+.||+|++|.||++.. .+++.+++|.+... .......+.+|+.+++.++|+||+++++++...+..++++||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR-KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc-chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 33446899999999999985 46889999988533 33345568899999999999999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+++|.+++.. ..+++..+..++.|++.|++|||+.+ ++||||+|+||+++.++.++|+|||++......... .
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~-~ 172 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR-R 172 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCcc-c
Confidence 9999999854 35899999999999999999999998 999999999999999999999999998765443221 2
Q ss_pred cccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||....+. ..... ..... .+....
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~------~~~~~-~~~~~-----~~~~~~--- 237 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL------QAMKR-IRDNL-----PPKLKN--- 237 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH------HHHHH-HHhcC-----CCCCcc---
Confidence 2356889999999998888999999999999999999999998643221 11111 11111 111111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 323 VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
....+..+.+++.+||+.+|++||++.+++++-+..
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 273 (285)
T cd06648 238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLA 273 (285)
T ss_pred cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccc
Confidence 111345689999999999999999999999986654
No 310
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=8.8e-39 Score=294.35 Aligned_cols=264 Identities=26% Similarity=0.400 Sum_probs=201.2
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
+|+..+.||.|++|.||+|+.. +|..||+|.+...........+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999874 689999999875544444566788999999999999999999999999999999999
Q ss_pred cCCChhHHHhccC-CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 162 KNRSLDLLIYGES-DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
++ +|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++.........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 85 7888775433 345899999999999999999999988 999999999999999999999999999865433221
Q ss_pred cccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHH----------HHHHHhCcc
Q 040557 241 LSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA----------WKLYERGRI 309 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~----------~~~~~~~~~ 309 (407)
.....++..|++||.+.+. .++.++||||||+++|+|++|+.||......+. ..... ++.+..
T Consensus 157 -~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 230 (284)
T cd07836 157 -FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ--LLKIFRIMGTPTESTWPGISQ--- 230 (284)
T ss_pred -cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhHHHHhc---
Confidence 1234578899999987664 578999999999999999999999875432210 00000 000000
Q ss_pred ccccCccccc------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 310 LELVDPRMRK------EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 310 ~~~~d~~~~~------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.......... .......+..+.+++.+||+.||++||++.+++++-+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~ 283 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 0000000000 0011123456789999999999999999999998744
No 311
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-39 Score=319.01 Aligned_cols=273 Identities=18% Similarity=0.261 Sum_probs=193.7
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEecC--CcEEEEEEe--------------cc--ccChhhHHHHHHHHHHHHcCCCCc
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKLAD--GTLVAVKKL--------------CV--DKSQQGESEFLSEVRMITSIQHKN 140 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~--------------~~--~~~~~~~~~~~~e~~~l~~l~h~n 140 (407)
...++|++.+.||+|+||+||++.... +...+.|.+ .. .........+.+|+++|.+++|+|
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 345789999999999999999986432 222222211 00 112233456889999999999999
Q ss_pred eeeeeeeeecCCeeEEEEEeccCCChhHHHhccC---CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEE
Q 040557 141 LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGES---DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL 217 (407)
Q Consensus 141 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill 217 (407)
|+++++++...+..++|+|++. ++|..++.... ...........++.|++.||.|||+.+ |+||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 9999999999999999999985 46666654322 122345667789999999999999998 9999999999999
Q ss_pred cCCCceEEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCC-CCCcccCch
Q 040557 218 DEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDL-TLPSEMQYL 296 (407)
Q Consensus 218 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~-~~~~~~~~~ 296 (407)
+.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|..++.. ........+
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 9999999999999987765444334456799999999999999999999999999999999998854332 211111111
Q ss_pred hHHH-----------------HHHHHhCccc---cccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 297 PEYA-----------------WKLYERGRIL---ELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 297 ~~~~-----------------~~~~~~~~~~---~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.... +..+...... ..+...+... .....+.+++.+||+.||++|||+.|+++|.+
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNL----GLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhc----CCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 1100 0111000000 0000000000 11235677899999999999999999999988
Q ss_pred ccc
Q 040557 357 CKV 359 (407)
Q Consensus 357 ~~~ 359 (407)
+..
T Consensus 457 f~~ 459 (501)
T PHA03210 457 FSA 459 (501)
T ss_pred hhc
Confidence 643
No 312
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.3e-38 Score=291.23 Aligned_cols=264 Identities=23% Similarity=0.305 Sum_probs=195.7
Q ss_pred CCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecC--CeeEEEEE
Q 040557 84 FHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDG--SQRLLVYE 159 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 159 (407)
|++.+.||+|+||.||+|.. .+++.||+|.+.............+|+..+.++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56678899999999999985 4689999999865433333344568899999884 99999999999887 88999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|++ |+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++. +.++|+|||++........
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 997 47777765432 46899999999999999999999998 999999999999999 9999999999987654332
Q ss_pred ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC---------chhHHHHHHHHhCcc
Q 040557 240 YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ---------YLPEYAWKLYERGRI 309 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~---------~~~~~~~~~~~~~~~ 309 (407)
. ....++..|+|||.+.. +.++.++|||||||++|||++|..||......+.. ....+ .........
T Consensus 155 ~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 231 (282)
T cd07831 155 Y--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEV-LKKFRKSRH 231 (282)
T ss_pred c--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHH-HHhhccccc
Confidence 2 23457889999997654 56789999999999999999999998654321100 00000 001111110
Q ss_pred ccccCcccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 310 LELVDPRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 310 ~~~~d~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+..... ......+..+.+++.+||+.+|++||++.+++++-|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 00000000000 001234577999999999999999999999998754
No 313
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.2e-38 Score=300.41 Aligned_cols=274 Identities=22% Similarity=0.319 Sum_probs=203.3
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeec----CCee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSD----GSQR 154 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 154 (407)
..+|++.+.||+|+||.||+|... +|+.||+|++..... ......+.+|+.+++.++|+||+++.+++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888899999999999999854 699999999865432 2344567789999999999999999988753 3567
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++||||+. |+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999996 588888853 345899999999999999999999988 999999999999999999999999999765
Q ss_pred CCCCcc---cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------chhHHHHH
Q 040557 235 PEDQAY---LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YLPEYAWK 302 (407)
Q Consensus 235 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~~~~~~~ 302 (407)
...... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 433221 1123468889999998765 46899999999999999999999999654321100 00000000
Q ss_pred HHHhCccccccCcccccCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 303 LYERGRILELVDPRMRKEGI-----VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 303 ~~~~~~~~~~~d~~~~~~~~-----~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
......+.+..+..-..... ....+..+.+++.+||+.+|++||++.+++.+.|....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 00001111111100000001 11235678999999999999999999999999887543
No 314
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.4e-38 Score=294.51 Aligned_cols=268 Identities=24% Similarity=0.319 Sum_probs=199.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 157 (407)
++|+..+.||.|+||.||+|... +++.+|+|.+...... .....+.+|+.++.+++|+||+++.+++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46778889999999999999865 5889999998654322 2234567899999999999999999998777 889999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+.+ +|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 85 ~e~~~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVEH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcCc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 999974 8888876433 35899999999999999999999998 999999999999999999999999999876543
Q ss_pred CcccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCc-h-------hHHHHHHHHh--
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQY-L-------PEYAWKLYER-- 306 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~-~-------~~~~~~~~~~-- 306 (407)
... .....+++.|+|||.+.+. .++.++|+||||+++|||++|+.||.......... . ....+..+..
T Consensus 160 ~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 160 LKP-YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred ccc-cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 211 1234578899999988764 46899999999999999999999987543211000 0 0000000000
Q ss_pred ----CccccccCcccccCCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 307 ----GRILELVDPRMRKEGIVER-DALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 307 ----~~~~~~~d~~~~~~~~~~~-~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..........+.. ..... ....+.+++.+||+.+|++|||+.|++.+-|
T Consensus 239 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 239 GAKKKTFTKYPYNQLRK-KFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred hhcccccccccchhhhc-cccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 0000000001110 11111 2456789999999999999999999998754
No 315
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.5e-38 Score=291.24 Aligned_cols=267 Identities=25% Similarity=0.341 Sum_probs=200.4
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEEEEec
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
|++.+.||+|++|.||+|... +++.|++|++.............+|+..+++++ |+|++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566789999999999999875 578999999865433333445567999999998 999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
+|+|.+++.......+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY- 155 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCCc-
Confidence 889988886655457899999999999999999999988 999999999999999999999999999866543221
Q ss_pred ccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------ch--hHHHHHHHHhCccc
Q 040557 242 STNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YL--PEYAWKLYERGRIL 310 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~--~~~~~~~~~~~~~~ 310 (407)
....++..|+|||.+.+ ..++.++|+||||++++||++|+.||......+.. .. ..|...........
T Consensus 156 -~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 156 -TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred -CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 23467889999998754 56799999999999999999999888644321100 00 00000000000111
Q ss_pred cccCccccc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 311 ELVDPRMRK--EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 311 ~~~d~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+...... ..........+.+++.+||+.+|++|||++|++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 000000000 0000111456889999999999999999999998754
No 316
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.5e-38 Score=292.20 Aligned_cols=247 Identities=23% Similarity=0.307 Sum_probs=191.4
Q ss_pred eeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHH---cCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 89 LLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMIT---SIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
.||+|+||.||++... +++.+|+|.+..... ......+.+|..++. ..+|+|++.+.+++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 589999998864432 122233445544333 3479999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 81 ~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~--- 152 (279)
T cd05633 81 GGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--- 152 (279)
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccCc---
Confidence 9999988853 345899999999999999999999998 99999999999999999999999999976543321
Q ss_pred cccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 243 TNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
....|+..|+|||.+.+ ..++.++|||||||++|||++|..||........ ........ ..+..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~------~~~~~----- 217 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTL------TVNVE----- 217 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH----HHHHHHhh------cCCcC-----
Confidence 23468999999998864 5689999999999999999999999975433211 11111100 00111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
.+...+..+.+++.+||+.||++|| ++.++++|.++.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~ 259 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFK 259 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcccc
Confidence 2223456788999999999999999 699999998764
No 317
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8.8e-38 Score=283.11 Aligned_cols=254 Identities=29% Similarity=0.392 Sum_probs=207.1
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRLLVY 158 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 158 (407)
+|+..+.||+|++|.||+|... +++.|++|.+..... ......+.+|+..+++++|+||+++++.+.+. ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677789999999999999875 689999999865432 34567889999999999999999999999888 8899999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||+++++|.+++.... .+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999986443 6899999999999999999999988 9999999999999999999999999998776544
Q ss_pred cc-cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 239 AY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 239 ~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. ......++..|+|||.+.+..++.++||||||+++++|++|+.|+..... .....+........
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~-------- 222 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-----PMAALYKIGSSGEP-------- 222 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----hHHHHHhccccCCC--------
Confidence 21 12345688899999999888899999999999999999999999875431 11111111110000
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
...+...+..+.+++.+|++.+|++||++.+++.+.+
T Consensus 223 --~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~ 259 (260)
T cd06606 223 --PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPF 259 (260)
T ss_pred --cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCC
Confidence 1122233567899999999999999999999998764
No 318
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.4e-38 Score=294.93 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=198.9
Q ss_pred cCCCCCCeeeccCCccEEEEEecC-CcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|++.+.||+|+||.||+|...+ ++.||||.+...........+..|+.++.+. .|+||+++++++.+....+++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999998764 8999999986554444556677788877777 49999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
|+. +++..++... ...+++..+..++.|++.||.|||+ .+ ++||||+|+||++++++.++|+|||++..+....
T Consensus 95 ~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 95 LMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 985 4676666432 3468999999999999999999997 46 9999999999999999999999999998664433
Q ss_pred cccccccccCccccCccccccCC----CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGE----LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~----~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
.. ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... ........... .
T Consensus 170 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~-~----- 236 (296)
T cd06618 170 AK--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQEE-P----- 236 (296)
T ss_pred cc--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcCC-C-----
Confidence 22 2235788999999987553 789999999999999999999998542111 11111111111 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+.... ....+..+.+++.+||+.||++||++.+++++.+...
T Consensus 237 ~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 237 PSLPP---NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred CCCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 01100 0123456899999999999999999999999987543
No 319
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=315.64 Aligned_cols=263 Identities=27% Similarity=0.436 Sum_probs=213.5
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEec----C----CcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeee
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKLA----D----GTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGC 147 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 147 (407)
++...++..+.+.||+|+||.|++|... . ...||||.++........+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3444455566779999999999999642 1 4579999998777667788999999999999 79999999999
Q ss_pred eecCCeeEEEEEeccCCChhHHHhccC------------C--CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccc
Q 040557 148 CSDGSQRLLVYEYMKNRSLDLLIYGES------------D--KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKAS 213 (407)
Q Consensus 148 ~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~ 213 (407)
|...+..++|+||+..|+|..++...+ . ..++....+.++.|||.||+||++.. ++||||..+
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAAR 447 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhh
Confidence 999999999999999999999997554 0 23889999999999999999999988 999999999
Q ss_pred cEEEcCCCceEEecccCccccCCCCcccccccc--cCccccCccccccCCCCccccEEehhHHHHHHHhcC-CCCCCCCC
Q 040557 214 NVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA--GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCR-KNTDLTLP 290 (407)
Q Consensus 214 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~-~p~~~~~~ 290 (407)
|||++++..+||+|||+++.......+...... -+..|||||.+....|+.|+|||||||+|||++|.. .|+.. .+
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~-~~ 526 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG-IP 526 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC-CC
Confidence 999999999999999999977666655433333 345699999999999999999999999999999954 44432 11
Q ss_pred cccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 291 SEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. ...+.+.+..|... ..+..+..+++++++.||+.+|++||++.++++.+...
T Consensus 527 ~-----~~~l~~~l~~G~r~----------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 527 P-----TEELLEFLKEGNRM----------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred c-----HHHHHHHHhcCCCC----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 0 11223345544322 12344567789999999999999999999999999763
No 320
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-38 Score=295.31 Aligned_cols=265 Identities=24% Similarity=0.342 Sum_probs=198.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++|+..+.||+|++|.||+|... +|+.||+|.+..... ......+.+|++++++++|+||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999864 689999998854432 2234567899999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-CCceEEecccCccccCCCC
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-KFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~~~~~ 238 (407)
|++ ++|..++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 57877775444444688888999999999999999988 999999999999985 5679999999997654332
Q ss_pred cccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-C-ccccc---
Q 040557 239 AYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-G-RILEL--- 312 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~--- 312 (407)
.. .....+++.|+|||.+.+ ..++.++||||||+++|+|+||+.||......+ ........ + .....
T Consensus 158 ~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 158 RT-FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID------ELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cc-cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCChhhccc
Confidence 11 123457889999998866 457899999999999999999999986543211 11111100 0 00000
Q ss_pred ----cC-----cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 313 ----VD-----PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 313 ----~d-----~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.+ +..... ......+..+.+++.+|++.+|++||++.+++++-+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~ 287 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYF 287 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchH
Confidence 00 000000 0011224557899999999999999999999998664
No 321
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.4e-38 Score=293.32 Aligned_cols=264 Identities=25% Similarity=0.353 Sum_probs=199.7
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeEEEEE
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRLLVYE 159 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 159 (407)
|++.+.||.|++|.||+|... +|+.+|+|.+.... .......+.+|+++++.++|+|++++++++.+. ...++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 556788999999999999865 58999999997553 223345688999999999999999999999887 78999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
|+++ +|..++.... ..+++..+..++.|++.|++|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9975 8888875432 46899999999999999999999988 99999999999999999999999999987755442
Q ss_pred ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC------cc---
Q 040557 240 YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG------RI--- 309 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~--- 309 (407)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.|+........ + .......... ..
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ--L-EKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH--H-HHHHHHhCCCchhhccccccc
Confidence 22234457888999997765 4678999999999999999999999865432110 0 0000000000 00
Q ss_pred --------ccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 310 --------LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 310 --------~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.......+. ......++..+.+++.+||+.+|++||++.+++++-|
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~ 286 (287)
T cd07840 233 PWFENLKPKKPYKRRLR-EFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286 (287)
T ss_pred hhhhhccccccchhHHH-HHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcC
Confidence 000000000 0000112567889999999999999999999998754
No 322
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.9e-38 Score=298.47 Aligned_cols=269 Identities=24% Similarity=0.260 Sum_probs=201.0
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC------
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG------ 151 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 151 (407)
..++|+..+.||+|+||.||+|... +|+.||+|.+.... .......+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999854 68999999985432 233445678899999999999999999988543
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
...++||||+.+ +|.+.+... +++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence 356999999964 787776422 889999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCccc-C--------chhHH---
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEM-Q--------YLPEY--- 299 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~-~--------~~~~~--- 299 (407)
........ .....++..|+|||.+.+..++.++|||||||++|+|++|+.||........ . ....+
T Consensus 166 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 166 RTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred eeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 87644322 2334678899999999999999999999999999999999999864321100 0 00000
Q ss_pred ----HHHHHHhCc------cccccCccccc---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 300 ----AWKLYERGR------ILELVDPRMRK---EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 300 ----~~~~~~~~~------~~~~~d~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
......... ..+.+...... .......+..+.+++.+||+.||++|||+.|++++-|..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 000000000 00011000000 000112355688999999999999999999999997654
No 323
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.4e-38 Score=295.13 Aligned_cols=267 Identities=22% Similarity=0.329 Sum_probs=195.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-------
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSIQHKNLVRLLGCCSDGS------- 152 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 152 (407)
++|+..+.||+|+||.||+|... +++.||+|.+...... .....+.+|++++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 56888899999999999999864 6899999988643322 22345678999999999999999999986544
Q ss_pred -eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 153 -QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 153 -~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
..++||||+.+ +|..++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCc
Confidence 45999999965 777776533 235899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCcc---cccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH--
Q 040557 232 RFFPEDQAY---LSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE-- 305 (407)
Q Consensus 232 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 305 (407)
..+...... ......++..|+|||.+.+. .++.++||||||+++|||++|+.|+........ .........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~---~~~~~~~~~~~ 243 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ---LTLISQLCGSI 243 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCC
Confidence 866433221 11234578889999988664 478899999999999999999998865432110 001111000
Q ss_pred ------hCccccccC----cc-----cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 306 ------RGRILELVD----PR-----MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 306 ------~~~~~~~~d----~~-----~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.....+..+ +. .............+.+++.+||+.||++|||++++++|-|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~ 309 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCC
Confidence 000000000 00 0000000011245678999999999999999999998865
No 324
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.9e-38 Score=293.10 Aligned_cols=253 Identities=28% Similarity=0.404 Sum_probs=200.4
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
|...+.||+|+||.||+|+.. ++..||+|.+.... .......+.+|+++++.++|+|++++++++.+....++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 566788999999999999854 68899999986432 223445788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+.+ +|.+.+... ...+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 107 CLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 975 777766433 345899999999999999999999988 999999999999999999999999998755432
Q ss_pred cccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 241 LSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
....++..|+|||.+. .+.++.++|||||||++|||++|+.|+...... .........+. +..
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~~~------~~~ 244 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNES------PTL 244 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhccC------CCC
Confidence 2346888999999874 457899999999999999999999998643211 11111111110 001
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCC
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~ 362 (407)
........+.+++.+||+.+|++||++.+++++++......
T Consensus 245 ----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 245 ----QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ----CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 11223456889999999999999999999999988765443
No 325
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.7e-38 Score=294.72 Aligned_cols=270 Identities=22% Similarity=0.312 Sum_probs=197.4
Q ss_pred CCCCCCeeeccCCccEEEEEec---CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA---DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRL 155 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 155 (407)
+|++.+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.++..++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4677789999999999999864 47899999986532 122235677899999999999999999999888 7899
Q ss_pred EEEEeccCCChhHHHhccC---CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC----CCceEEecc
Q 040557 156 LVYEYMKNRSLDLLIYGES---DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDF 228 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~----~~~~kl~Df 228 (407)
+||||+++ ++.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 5666553221 236899999999999999999999998 999999999999999 999999999
Q ss_pred cCccccCCCCc--ccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhH---HHHH
Q 040557 229 GLARFFPEDQA--YLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE---YAWK 302 (407)
Q Consensus 229 gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~---~~~~ 302 (407)
|++........ .......++..|+|||.+.+ ..++.++||||||+++++|++|+.||...........+. ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987644322 11233567889999998776 457899999999999999999999997554332110000 0000
Q ss_pred HHH--------------hC-ccccccC----cccccCCCCH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 303 LYE--------------RG-RILELVD----PRMRKEGIVE------RDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 303 ~~~--------------~~-~~~~~~d----~~~~~~~~~~------~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+. .. ......+ .......... .....+.+++.+||+.||++|||+.|+++|-+
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~ 315 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCC
Confidence 000 00 0000000 0000000000 12346889999999999999999999998754
No 326
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-40 Score=330.54 Aligned_cols=260 Identities=29% Similarity=0.382 Sum_probs=209.2
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCee
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 154 (407)
+...+-+|..+..||.|.||.||.|. ..+|...|+|.+..... ......+.+|+.++..++|||+|+++|+-.+.+..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 44556788889999999999999997 45799999998865432 33345678999999999999999999999999999
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
+|.||||++|+|.+.+. .+...++.....+..|++.|+.|||++| ||||||||.||+|+.+|.+|++|||.|..+
T Consensus 1310 ~IFMEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999999984 3445677777788899999999999999 999999999999999999999999999987
Q ss_pred CCCCcc---cccccccCccccCccccccC---CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCc
Q 040557 235 PEDQAY---LSTNFAGTLGYTAPEYAIRG---ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR 308 (407)
Q Consensus 235 ~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 308 (407)
...... .-....||+.|||||.+.+. ....++||||+|||++||+||++||..... +.+.+ -++..|
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-e~aIM-----y~V~~g- 1457 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-EWAIM-----YHVAAG- 1457 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-hhHHH-----hHHhcc-
Confidence 654311 12356799999999999764 356789999999999999999999964221 11100 111112
Q ss_pred cccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 309 ILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 309 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+..+......-.+++..||+.||++|.++.|++++--.
T Consensus 1458 ---------h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1458 ---------HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred ---------CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 1223445566677899999999999999999999988543
No 327
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.2e-37 Score=282.16 Aligned_cols=253 Identities=24% Similarity=0.408 Sum_probs=207.1
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|+..+.||.|+||.||++... ++..+|+|++..... ......+.+|+++++.++|+|++++.+.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999864 689999999865432 34556788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccC--CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 161 MKNRSLDLLIYGES--DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 161 ~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
+++++|.+++.... ...+++..+..++.+++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999986543 467999999999999999999999998 9999999999999999999999999998765543
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. ......|++.|+|||...+..++.++|+||+|+++++|++|+.|+...... ...... ......
T Consensus 158 ~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~-------- 221 (258)
T cd08215 158 D-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKI-LKGQYP-------- 221 (258)
T ss_pred c-eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHH-hcCCCC--------
Confidence 2 223456889999999998888999999999999999999999998643211 111111 111111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+......+.+++.+||+.+|++|||+.+++++-+
T Consensus 222 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 222 --PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence 011123456889999999999999999999998743
No 328
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.6e-38 Score=290.90 Aligned_cols=261 Identities=25% Similarity=0.372 Sum_probs=201.6
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
|+..+.||.|++|.||+|... +|+.+++|.+...... .....+.+|++++++++|+||+++++++.+++..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456688999999999999864 6899999998654322 34567889999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
++ +|..++.... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~-~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR-P 154 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-c
Confidence 75 8877775433 46899999999999999999999998 99999999999999999999999999987765441 1
Q ss_pred ccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-Cc--------ccc
Q 040557 242 STNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-GR--------ILE 311 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~ 311 (407)
.....++..|+|||.+.+. .++.++|+||||+++|+|+||+.||......+ ........ +. ..+
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID------QLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHcCCCchHhcccchh
Confidence 2234578899999998776 78999999999999999999998886433211 00000000 00 000
Q ss_pred --------ccC-cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 312 --------LVD-PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 312 --------~~d-~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
..+ ............+..+.+++.+||+.||.+||++.+++.+-|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~ 282 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence 000 000000112234667899999999999999999999998754
No 329
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8e-38 Score=292.31 Aligned_cols=261 Identities=21% Similarity=0.237 Sum_probs=196.9
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccc-cChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCC
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
++.+|.|+++.||++.. +|+.||+|++... ........+.+|+++++.++|+||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455555555555554 6999999998654 244556789999999999999999999999999999999999999999
Q ss_pred hhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc------
Q 040557 166 LDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA------ 239 (407)
Q Consensus 166 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~------ 239 (407)
|.+++.......+++.....++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||.+........
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 999997655566899999999999999999999998 99999999999999999999999999875532211
Q ss_pred ccccccccCccccCcccccc--CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccccc----
Q 040557 240 YLSTNFAGTLGYTAPEYAIR--GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV---- 313 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 313 (407)
.......++..|+|||.+.. ..++.++|||||||++|||++|+.||....... ...... .+.....+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~------~~~~~~-~~~~~~~~~~~~ 235 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ------MLLEKV-RGTVPCLLDKST 235 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHH-hccCccccccCc
Confidence 01123456778999998876 358899999999999999999999987432211 000000 00000000
Q ss_pred ----------------Ccccc---cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 314 ----------------DPRMR---KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 314 ----------------d~~~~---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
++... ...........+.+++.+||+.||++|||++++++|.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~ 299 (314)
T cd08216 236 YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299 (314)
T ss_pred hhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence 00000 0011223346788999999999999999999999987754
No 330
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-38 Score=318.82 Aligned_cols=257 Identities=26% Similarity=0.419 Sum_probs=194.1
Q ss_pred HHHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeec------
Q 040557 78 KKATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD------ 150 (407)
Q Consensus 78 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 150 (407)
.+-..+|+..+.||+||||.||+++++ ||+.||||++...........+.+|+..|++|+|||||+++..+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 345577888889999999999999865 8999999999876655666788999999999999999998763100
Q ss_pred --------------------------------------------------------------------------------
Q 040557 151 -------------------------------------------------------------------------------- 150 (407)
Q Consensus 151 -------------------------------------------------------------------------------- 150 (407)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------C--------CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccc
Q 040557 151 -------------------------G--------SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL 197 (407)
Q Consensus 151 -------------------------~--------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L 197 (407)
. ..+|+-||||+..++.++++.+.... .....++++.+|++||.|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 0 23478899999988888885443211 4678899999999999999
Q ss_pred cccCCCceeeeccccccEEEcCCCceEEecccCccccC-----------------CCCcccccccccCccccCccccccC
Q 040557 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP-----------------EDQAYLSTNFAGTLGYTAPEYAIRG 260 (407)
Q Consensus 198 H~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~ 260 (407)
|+.| +|||||||.||+|+++..|||+|||+|+... .......+..+||.-|+|||.+.+.
T Consensus 714 H~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 9999 9999999999999999999999999998721 0111133467899999999998764
Q ss_pred ---CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHc
Q 040557 261 ---ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFIC 337 (407)
Q Consensus 261 ---~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~c 337 (407)
.|+.|+|+||+|||++||+. ||..... ...+...+..+.+..- +. +..+....-.++|+|+
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME------Ra~iL~~LR~g~iP~~--~~-----f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSME------RASILTNLRKGSIPEP--AD-----FFDPEHPEEASLIRWL 854 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchHH------HHHHHHhcccCCCCCC--cc-----cccccchHHHHHHHHH
Confidence 59999999999999999985 3332110 1111222233333322 11 1112233356899999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 040557 338 LQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 338 l~~~p~~RPs~~ev~~~ 354 (407)
++.||++|||+.|++..
T Consensus 855 l~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLNS 871 (1351)
T ss_pred hcCCCccCCCHHHHhhc
Confidence 99999999999999875
No 331
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1e-37 Score=293.42 Aligned_cols=260 Identities=22% Similarity=0.315 Sum_probs=196.3
Q ss_pred eeecc--CCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 89 LLGRG--GFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 89 ~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
.||+| +||+||++.. .+|+.||+|.+.... .....+.+.+|+.+++.++|+||+++++++..++..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999986 479999999986543 3334567889999999999999999999999999999999999999
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc---
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL--- 241 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~--- 241 (407)
+|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++++||+.+..........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 9999987655556899999999999999999999988 9999999999999999999999998654332111100
Q ss_pred ---ccccccCccccCccccccC--CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh----------
Q 040557 242 ---STNFAGTLGYTAPEYAIRG--ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER---------- 306 (407)
Q Consensus 242 ---~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 306 (407)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||........ .......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM------LLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH------HHHHhcCCCCCCccccc
Confidence 0112345679999998764 478999999999999999999999864322110 0000000
Q ss_pred --------------------------CccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 307 --------------------------GRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 307 --------------------------~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+......+..+.. .........+.+++.+||+.||++|||+++++++.|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~ 312 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRT-PSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK 312 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccc-hhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence 0000001111111 11233566789999999999999999999999998753
No 332
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5e-38 Score=292.00 Aligned_cols=270 Identities=24% Similarity=0.355 Sum_probs=199.4
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC----
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS---- 152 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 152 (407)
...++|++.+.||+|+||.||+|... +|+.||+|.+..... ......+.+|+++++.++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578899999999999999999875 589999999865432 223356778999999999999999999887654
Q ss_pred ------eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEe
Q 040557 153 ------QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIG 226 (407)
Q Consensus 153 ------~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~ 226 (407)
..++|+||+++ ++...+... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence 78999999986 666666433 345899999999999999999999998 9999999999999999999999
Q ss_pred cccCccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH
Q 040557 227 DFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE 305 (407)
Q Consensus 227 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 305 (407)
|||++...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .+ ........
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~--~~-~~~~~~~~ 235 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA--QL-ELISRLCG 235 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH--HH-HHHHHHhC
Confidence 999998765443222223356788999998765 457899999999999999999999986432211 00 00111100
Q ss_pred hCc-----------cccccCcccc--c--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 306 RGR-----------ILELVDPRMR--K--EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 306 ~~~-----------~~~~~d~~~~--~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
... .....+..-. . .......+..+.+++.+||+.+|++|||+.+++++-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 301 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301 (302)
T ss_pred CCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 000 0000000000 0 0000112456889999999999999999999998754
No 333
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.8e-37 Score=284.62 Aligned_cols=261 Identities=26% Similarity=0.361 Sum_probs=197.3
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChh-hHHHHHHHHHHHHcC---CCCceeeeeeeeecCCe-----
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSI---QHKNLVRLLGCCSDGSQ----- 153 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 153 (407)
|++.+.||+|+||.||+|... +++.||+|.+....... ....+.+|+.++.++ +|+|++++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 556788999999999999976 48999999996443322 234566787776655 69999999999987776
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.+++|||+.+ +|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 8999999975 7888886544446899999999999999999999988 99999999999999999999999999987
Q ss_pred cCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccc---
Q 040557 234 FPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRIL--- 310 (407)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 310 (407)
....... ....++..|+|||.+.+..++.++|||||||++|||++|+.|+......+ ...+........
T Consensus 157 ~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 228 (287)
T cd07838 157 YSFEMAL--TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD------QLDKIFDVIGLPSEE 228 (287)
T ss_pred ccCCccc--ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH------HHHHHHHHcCCCChH
Confidence 6443221 23357889999999999999999999999999999999998886543221 111111100000
Q ss_pred ----------cccCccccc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 311 ----------ELVDPRMRK--EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 311 ----------~~~d~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
......... ..........+.+++.+||+.||++||++.+++.+-+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~ 286 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence 000000000 0111233467789999999999999999999998743
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8.4e-38 Score=295.07 Aligned_cols=271 Identities=22% Similarity=0.339 Sum_probs=199.5
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecC--Cee
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDG--SQR 154 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 154 (407)
..++|++.+.||+|+||.||+|... +|+.+|+|++.... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888899999999999999865 58899999885421 223345677899999999 999999999988643 468
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++||||+. ++|..++... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999997 5888887543 6889999999999999999999988 999999999999999999999999999866
Q ss_pred CCCCcc----cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCc--------hhHHHH
Q 040557 235 PEDQAY----LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQY--------LPEYAW 301 (407)
Q Consensus 235 ~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~--------~~~~~~ 301 (407)
...... ......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 543321 2233568899999998765 567899999999999999999999986433221000 000000
Q ss_pred HHHHhCccccccCccccc-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 302 KLYERGRILELVDPRMRK-----EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~-----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
..+........++..... .......+..+.+++.+||+.||++|||+.+++++-+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~ 298 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYV 298 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhh
Confidence 000000000011100000 00111135678999999999999999999999988543
No 335
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1e-37 Score=288.89 Aligned_cols=264 Identities=23% Similarity=0.308 Sum_probs=197.0
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-hhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCe-----
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-QGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQ----- 153 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~----- 153 (407)
++|+..+.||+|+||.||+|... +|+.||+|.+...... .....+.+|+.+++.+ +|+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888899999999999999864 6899999988654322 2335678899999999 56999999999876655
Q ss_pred eEEEEEeccCCChhHHHhccC---CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-CCceEEeccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGES---DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-KFQSKIGDFG 229 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfg 229 (407)
.++||||+++ +|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++. ++.++|+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 7888775432 346899999999999999999999998 999999999999998 8899999999
Q ss_pred CccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-C
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-G 307 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~ 307 (407)
++..+...... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||....... ........ +
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~------~~~~~~~~~~ 229 (295)
T cd07837 157 LGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ------QLLHIFKLLG 229 (295)
T ss_pred cceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHHHhC
Confidence 99865432211 122356888999998865 467999999999999999999999886532211 11111110 0
Q ss_pred ccccccC------------cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 308 RILELVD------------PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 308 ~~~~~~d------------~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
......- +..... .........+.+++.+||+.||.+||++.|++.|-|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~ 293 (295)
T cd07837 230 TPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293 (295)
T ss_pred CCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCC
Confidence 0000000 000000 001123456889999999999999999999998865
No 336
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.1e-38 Score=294.47 Aligned_cols=264 Identities=27% Similarity=0.339 Sum_probs=200.0
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChh-hHHHHHHHHHHHHcCCCCceeeeeeeeecC--CeeEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQRLL 156 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 156 (407)
.++|++.+.||+|+||.||+|... +|+.||+|.+....... ....+.+|+.++.+++|+|++++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 367888899999999999999864 68999999986443222 233566899999999999999999998654 56899
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
||||+.+ +|.+++.... ..+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||++.....
T Consensus 86 v~e~~~~-~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999975 7888775433 45899999999999999999999998 99999999999999999999999999987654
Q ss_pred CCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh---------
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER--------- 306 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------- 306 (407)
.... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....+.. ........
T Consensus 161 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~------~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 161 PAKP-MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE------QLDLIIQLLGTPNESIW 233 (309)
T ss_pred ccCC-CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhcCCCChhhc
Confidence 3221 122345788999998865 567899999999999999999999986443211 11111110
Q ss_pred -----CccccccCcccccCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 307 -----GRILELVDPRMRKEGI------VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 307 -----~~~~~~~d~~~~~~~~------~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
......+ ....... .......+.+++.+||+.||++|||+.++++|.|+.
T Consensus 234 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 234 PGFSDLPLVGKF--TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred hhhhcccccccc--cccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 0000000 0000000 011245678999999999999999999999998874
No 337
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-37 Score=287.17 Aligned_cols=256 Identities=23% Similarity=0.293 Sum_probs=201.0
Q ss_pred CCCCCCeeeccCCccEEEEEe----cCCcEEEEEEecccc---ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCee
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL----ADGTLVAVKKLCVDK---SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 154 (407)
+|++.+.||+|+||.||.+.. .+|..||+|++.... .....+.+.+|+.++.++ +|+||+++.+++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477788999999999999975 368999999986432 122345678899999999 699999999999999999
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||+++++.++|+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999998543 45889999999999999999999988 999999999999999999999999999876
Q ss_pred CCCCcccccccccCccccCccccccC--CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 235 PEDQAYLSTNFAGTLGYTAPEYAIRG--ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
............|+..|+|||.+.+. .++.++||||||+++|+|++|+.|+...... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~~----- 228 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKSE----- 228 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhccC-----
Confidence 54433323345688999999988753 4688999999999999999999998643221 11111111111110
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhc
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTC 357 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~ 357 (407)
+. .+......+.+++.+||+.||++|| ++.+++.+-+.
T Consensus 229 --~~-----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~ 271 (290)
T cd05613 229 --PP-----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFF 271 (290)
T ss_pred --CC-----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccc
Confidence 11 1122345678999999999999997 78888887654
No 338
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7.7e-38 Score=283.43 Aligned_cols=250 Identities=28% Similarity=0.419 Sum_probs=204.9
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|++.+.||.|+||.||++.. .+++.+|+|.+.... .......+.+|+++++.++|+||+++.+++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477788999999999999975 468899999986533 334456778999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccC--CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 161 MKNRSLDLLIYGES--DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 161 ~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
+++++|..++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|.||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999885422 356899999999999999999999998 9999999999999999999999999998775542
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
.....++..|++||...+..++.++|+||||+++|||++|+.|+...... . .......+...
T Consensus 158 ---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~-~~~~~~~~~~~-------- 219 (256)
T cd08530 158 ---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ------D-LRYKVQRGKYP-------- 219 (256)
T ss_pred ---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------H-HHHHHhcCCCC--------
Confidence 22346888999999999999999999999999999999999998643321 1 11111111111
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
........++.+++.+||+.+|++||++.+++++.
T Consensus 220 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 220 --PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred --CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 12234556789999999999999999999999873
No 339
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=9.9e-38 Score=293.17 Aligned_cols=277 Identities=23% Similarity=0.288 Sum_probs=204.5
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeec-CCeeE
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSD-GSQRL 155 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 155 (407)
.++++|+..+.||.|+||.||+|... +|+.||+|++.... .......+.+|++++..++||||+++.+++.. ....+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 45688999999999999999999754 79999999885432 22334667899999999999999999998865 56789
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
+++||+ +++|..++.. ..+++.....++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++....
T Consensus 87 lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 87 FVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred EEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 999998 5688888742 34788888899999999999999998 9999999999999999999999999997543
Q ss_pred CCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------ch-hHHHHHHHH
Q 040557 236 EDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YL-PEYAWKLYE 305 (407)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~-~~~~~~~~~ 305 (407)
... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... .. .++......
T Consensus 160 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 160 PQM----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred CCc----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 322 23457889999998766 57899999999999999999999998654321000 00 000000000
Q ss_pred hCccccccCcccccCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCCCCCCc
Q 040557 306 RGRILELVDPRMRKEGIV-----ERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIPVRP 367 (407)
Q Consensus 306 ~~~~~~~~d~~~~~~~~~-----~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~~~~~p 367 (407)
....+.+.........+ ...+..+.+++.+||+.+|++|||+.+++.+-+.......+..|
T Consensus 236 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~ 301 (328)
T cd07856 236 -ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEP 301 (328)
T ss_pred -hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcccc
Confidence 00000000000000011 11245788999999999999999999999998765544443333
No 340
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2e-38 Score=299.18 Aligned_cols=266 Identities=23% Similarity=0.331 Sum_probs=199.8
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC-----Ce
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG-----SQ 153 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 153 (407)
.++|.+.+.||+|+||.||+|+. .+|+.||+|.+.... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35788889999999999999985 468999999986432 223345677899999999999999999987644 34
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.++|+||+. ++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999996 688888743 345899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHH--------
Q 040557 234 FPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLY-------- 304 (407)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 304 (407)
...... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ........
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 158 TSEKGD-FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ---LKLITELLGSPSEEDL 233 (337)
T ss_pred cCCCcc-cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCChHHh
Confidence 654321 2233467889999998765 4689999999999999999999999864321100 00000000
Q ss_pred ---HhCcccc-------ccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 305 ---ERGRILE-------LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 305 ---~~~~~~~-------~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
....... ..+.... ......+..+.+++.+||+.+|++|||+.++++|-+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~ 295 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFA--RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHH--HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence 0000000 0000000 01112346688999999999999999999999997654
No 341
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.9e-37 Score=284.76 Aligned_cols=247 Identities=23% Similarity=0.310 Sum_probs=191.5
Q ss_pred eeeccCCccEEEEEec-CCcEEEEEEeccccCh--hhHHHHHHHHH---HHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 89 LLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ--QGESEFLSEVR---MITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
.||+|+||.||+|... +++.||+|.+...... .....+..|.. .+....|+||+++.+++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 5889999998643321 22223444443 3444579999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+|+|..++.. ...+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.++|+|||++..+.....
T Consensus 81 g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~--- 152 (278)
T cd05606 81 GGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--- 152 (278)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccCC---
Confidence 9999988853 346899999999999999999999988 99999999999999999999999999976543322
Q ss_pred cccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 243 TNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
....|+..|+|||.+.++ .++.++||||||+++|||++|+.||......... ........ .+..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~------~~~~----- 217 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH----EIDRMTLT------MAVE----- 217 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH----HHHHHhhc------cCCC-----
Confidence 234689999999998754 6899999999999999999999998754322111 11111100 0111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRP-----PMSEIVAMLTCK 358 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~ev~~~l~~~ 358 (407)
.+...+..+.+++.+||+.+|++|| ++.+++++.+..
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~ 259 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR 259 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence 1112345688999999999999999 999999887753
No 342
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6.8e-38 Score=287.61 Aligned_cols=252 Identities=22% Similarity=0.286 Sum_probs=204.6
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 157 (407)
++|.+.+.||+|+||.||+|... +|..||+|.+.... .......+.+|.+++++++ |+||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999864 69999999986432 2334567889999999998 99999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999998543 36999999999999999999999988 999999999999999999999999999876543
Q ss_pred Cc-------------------ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhH
Q 040557 238 QA-------------------YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298 (407)
Q Consensus 238 ~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~ 298 (407)
.. .......++..|+|||.+.+..++.++||||||++++++++|+.|+...... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~ 229 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY------L 229 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH------H
Confidence 32 1122345788999999998888999999999999999999999998744310 1
Q ss_pred HHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCH----HHHHHHhh
Q 040557 299 YAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPM----SEIVAMLT 356 (407)
Q Consensus 299 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~----~ev~~~l~ 356 (407)
....... . .. ..+...+..+.+++.+||+.+|++||++ +++++|.+
T Consensus 230 ~~~~~~~-~------~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 230 TFQKILK-L------EY-----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred HHHHHHh-c------CC-----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 1111110 0 00 1122235568899999999999999999 89888754
No 343
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.9e-38 Score=295.82 Aligned_cols=265 Identities=23% Similarity=0.309 Sum_probs=204.1
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-----eeE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS-----QRL 155 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 155 (407)
+|++.+.||.|++|.||+|+.. +|+.||+|.+..... ......+.+|+++++.++|+||+++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999865 489999999864332 344567889999999999999999999987765 789
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
++|||+.+ +|..++... ..+++..+..++.|++.||.|||+.+ ++|+||||.||++++++.++|+|||++....
T Consensus 81 lv~e~~~~-~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMET-DLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchhh-hHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 99999974 788887533 36999999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCc--ccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH-------
Q 040557 236 EDQA--YLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE------- 305 (407)
Q Consensus 236 ~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 305 (407)
.... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+. ......
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~------~~~i~~~~~~~~~ 228 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ------LNLIVEVLGTPSE 228 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH------HHHHHHhcCCCCh
Confidence 5431 112334678899999999887 889999999999999999999999865432110 000000
Q ss_pred -------hCccccccCc-----ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 306 -------RGRILELVDP-----RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 306 -------~~~~~~~~d~-----~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.......+.. ...........+..+.+++.+||+.+|++||++.+++.+.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 0000000000 00000011123456889999999999999999999999977643
No 344
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.1e-37 Score=282.71 Aligned_cols=251 Identities=22% Similarity=0.260 Sum_probs=194.4
Q ss_pred HHHHhcCCCCCCee--eccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCC
Q 040557 77 LKKATKNFHPGNLL--GRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGS 152 (407)
Q Consensus 77 ~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 152 (407)
.....++|++.+.+ |+|+||.||++.. .++..+|+|.+....... .|......+ +|+|++++++++...+
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence 34445677776766 9999999999985 468889999885432211 122222222 7999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-ceEEecccCc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-QSKIGDFGLA 231 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla 231 (407)
..++||||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 999999999999999998544 36899999999999999999999998 99999999999999988 9999999999
Q ss_pred cccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcccc
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (407)
....... ...++..|+|||.+.+..++.++||||||+++|||++|+.||......... ...+... . .
T Consensus 158 ~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-~-~----- 224 (267)
T PHA03390 158 KIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD-LESLLKR-Q-Q----- 224 (267)
T ss_pred eecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh-HHHHHHh-h-c-----
Confidence 8664332 246889999999999989999999999999999999999999743322211 1111110 0 0
Q ss_pred ccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHhhc
Q 040557 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP-MSEIVAMLTC 357 (407)
Q Consensus 312 ~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-~~ev~~~l~~ 357 (407)
... ......+..+.+++.+||+.+|.+||+ ++++++|-|.
T Consensus 225 ---~~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~ 265 (267)
T PHA03390 225 ---KKL---PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265 (267)
T ss_pred ---ccC---CcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcc
Confidence 000 111234566889999999999999995 6999988764
No 345
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-38 Score=301.59 Aligned_cols=263 Identities=25% Similarity=0.347 Sum_probs=202.5
Q ss_pred CCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC------eeE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS------QRL 155 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~ 155 (407)
.|...+.||+|+||.||+|++ .+|+.||||.++........+...+|+++|++++|+|||++++.-+... ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 455567899999999999995 5799999999987666677788899999999999999999998865433 568
Q ss_pred EEEEeccCCChhHHHhccC-CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc--CCC--ceEEecccC
Q 040557 156 LVYEYMKNRSLDLLIYGES-DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD--EKF--QSKIGDFGL 230 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~--~~~--~~kl~Dfgl 230 (407)
+|||||.+|||...+.... ..+|++...+.++.+++.||.|||+++ |+||||||.||++- ++| -.||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999997544 467999999999999999999999988 99999999999994 323 469999999
Q ss_pred ccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc
Q 040557 231 ARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI 309 (407)
Q Consensus 231 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (407)
|+.++++. .....+||..|.+||.... +.|+..+|.|||||++|+++||..||........ ..+..+.......-
T Consensus 171 Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~--~~~~~~~~~tkkp~ 246 (732)
T KOG4250|consen 171 ARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKN--NKEIMWHIITKKPS 246 (732)
T ss_pred cccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccc--cchhhhhhhccCCC
Confidence 99988776 3456899999999998884 8899999999999999999999999976544321 12233333322211
Q ss_pred cccc--Ccccc-----c------CCCCHHHHHHHHHHHHHccCCCCCCCC--CHHHHH
Q 040557 310 LELV--DPRMR-----K------EGIVERDALQVINVAFICLQPHGNQRP--PMSEIV 352 (407)
Q Consensus 310 ~~~~--d~~~~-----~------~~~~~~~~~~l~~l~~~cl~~~p~~RP--s~~ev~ 352 (407)
...+ ++... . -.........+-.++..+|..+|++|- ...+..
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~F 304 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFF 304 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHH
Confidence 1111 11111 0 012223345566777778888999888 444443
No 346
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.1e-37 Score=282.20 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=198.5
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc----ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC--Cee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK----SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--SQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 154 (407)
.+|++.+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999986 468999999875321 223446788999999999999999999998664 457
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++++||+++++|.+++... ..+++.....++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 8999999999999988543 34789999999999999999999998 999999999999999999999999999865
Q ss_pred CCCC--cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 235 PEDQ--AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 235 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
.... ........++..|+|||.+.+..++.++|+|||||++++|++|+.||...... ....+..... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~--- 226 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM------AAIFKIATQP-T--- 226 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH------HHHHHHHcCC-C---
Confidence 3211 11112356889999999999888999999999999999999999998642111 1111111100 0
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
....+......+.+++.+||+ +|..||+..+++.|.
T Consensus 227 ------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 227 ------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred ------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 011233344568899999999 579999999998864
No 347
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.9e-37 Score=286.19 Aligned_cols=255 Identities=23% Similarity=0.314 Sum_probs=199.1
Q ss_pred CCCCCCeeeccCCccEEEEEe----cCCcEEEEEEecccc---ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCee
Q 040557 83 NFHPGNLLGRGGFGPVYRGKL----ADGTLVAVKKLCVDK---SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 154 (407)
+|++.+.||+|++|.||+++. .+++.||||.+.... .......+.+|+.++.++ +|+||+++.+.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367778999999999999874 357889999986432 122345688999999999 699999999999999999
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..+
T Consensus 81 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 999999999999998853 345889999999999999999999988 999999999999999999999999999876
Q ss_pred CCCCcccccccccCccccCccccccCC--CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccc
Q 040557 235 PEDQAYLSTNFAGTLGYTAPEYAIRGE--LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312 (407)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (407)
............|+..|+|||.+.+.. .+.++||||||+++|||++|..|+...... .............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~------ 227 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKS------ 227 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHcc------
Confidence 544333333456889999999987655 788999999999999999999998532211 0011111111110
Q ss_pred cCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 313 VDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 313 ~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+. .+......+.+++.+||+.+|++|||+.++.+.|.
T Consensus 228 -~~~-----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 228 -KPP-----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred -CCC-----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 011 11223456789999999999999999887766654
No 348
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.4e-38 Score=294.82 Aligned_cols=255 Identities=24% Similarity=0.328 Sum_probs=210.4
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
....|.+...||+|.|+.|.+|++. +|..||+|.+.+... ......+.+|+++|..++|||||+++.+......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 4467888999999999999999854 699999999876542 23335588999999999999999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+.+|.+.+++.... ...+..+..++.|+..|++|||+++ |+|||||.+||||+.+.++||+|||++..+...
T Consensus 134 ~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeeccc
Confidence 99999999999996544 3566888889999999999999999 999999999999999999999999999988744
Q ss_pred CcccccccccCccccCccccccCCC-CccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
. ...+.+|++.|.|||.+.+..| ++.+|+||+|++||-|+.|..||++..-.+.+. ..+-..
T Consensus 209 ~--~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~---------------rvl~gk 271 (596)
T KOG0586|consen 209 L--MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP---------------RVLRGK 271 (596)
T ss_pred c--cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccc---------------hheeee
Confidence 3 3356899999999999999877 689999999999999999999998654332210 001111
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
++ .+.-...+.-+++++++-.+|.+|++++++.++-|...
T Consensus 272 ~r---Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 272 YR---IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred ec---ccceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 11 22222345668899999999999999999999888544
No 349
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.9e-37 Score=282.10 Aligned_cols=247 Identities=24% Similarity=0.318 Sum_probs=196.2
Q ss_pred eeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
||+|+||.||++... +|+.+++|.+..... ......+.+|++++++++|+||+++++.+..+...+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999875 499999999864332 24456788999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc-------
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA------- 239 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~------- 239 (407)
.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99986433 6899999999999999999999988 99999999999999999999999999876543321
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.......++..|+|||......++.++||||||++++||++|+.|+...... ... .....+... ...
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~-~~~~~~~~~------~~~ 222 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE------EIF-QNILNGKIE------WPE 222 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHHhcCCcC------CCc
Confidence 1223356788999999998888999999999999999999999998644321 111 111111110 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCH---HHHHHHhhc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPM---SEIVAMLTC 357 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~---~ev~~~l~~ 357 (407)
....+..+.+++.+||+.+|++|||+ .+++++-+.
T Consensus 223 ---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~ 260 (265)
T cd05579 223 ---DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFF 260 (265)
T ss_pred ---cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccc
Confidence 00124668899999999999999999 666655443
No 350
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.9e-37 Score=277.21 Aligned_cols=249 Identities=27% Similarity=0.465 Sum_probs=203.2
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|++.+.||+|++|.||++... +++.|++|.+..... ......+.+|++++++++|+|++++++++.+++..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777899999999999999764 588999999865432 24456789999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999998543 56899999999999999999999998 999999999999999999999999999877554332
Q ss_pred cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
.....++..|+|||...+..++.++||||||+++++|++|+.|+...... ...+.... ... +.
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-~~~-----~~---- 218 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM------AALFRIVQ-DDH-----PP---- 218 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHhc-cCC-----CC----
Confidence 23356888999999988888899999999999999999999998643211 11111111 110 11
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
.+...+..+.+++.+||+.+|++|||+.+++.+
T Consensus 219 -~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 219 -LPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred -CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 112234568899999999999999999999875
No 351
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1e-37 Score=288.81 Aligned_cols=259 Identities=19% Similarity=0.264 Sum_probs=183.0
Q ss_pred hcCCCCCCeeeccCCccEEEEEecC----CcEEEEEEeccccChhh-H---------HHHHHHHHHHHcCCCCceeeeee
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQG-E---------SEFLSEVRMITSIQHKNLVRLLG 146 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-~---------~~~~~e~~~l~~l~h~niv~l~~ 146 (407)
.++|++.+.||+|+||.||+|...+ +..+|+|.......... + .....+...+..++|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3678999999999999999998654 34566665432221110 0 11223344556678999999999
Q ss_pred eeecCC----eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc
Q 040557 147 CCSDGS----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ 222 (407)
Q Consensus 147 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~ 222 (407)
++.... ..++++|++.. ++.+.+... ...++..+..++.|++.||.|||+.+ ++||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 765443 34677777643 555555322 23578888999999999999999988 999999999999999999
Q ss_pred eEEecccCccccCCCCcc------cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCch
Q 040557 223 SKIGDFGLARFFPEDQAY------LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYL 296 (407)
Q Consensus 223 ~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~ 296 (407)
++|+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ..
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~-~~ 243 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN-LI 243 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH-HH
Confidence 999999999876432211 11234699999999999999999999999999999999999999975422111 00
Q ss_pred hHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 297 PEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 297 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
......... .+...... ....+..+.+++..|++.+|++||++.++++.+
T Consensus 244 ~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIK-----RLHEGKIK----IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHH-----Hhhhhhhc----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000000000 00001110 112346688999999999999999999999876
No 352
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2e-37 Score=288.80 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=198.8
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccc--cChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVD--KSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
|+..+.||+|+||.||+|+.. ++..+|+|.+... .......++.+|+++++.++|+|++++.+++......++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 555678999999999999864 5888999988542 2233445788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+. |++.+++... ...+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 97 ~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 169 (308)
T cd06634 97 CL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-- 169 (308)
T ss_pred cC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCcc--
Confidence 96 5777766533 345899999999999999999999988 9999999999999999999999999997654322
Q ss_pred cccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 241 LSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
...++..|+|||.+. ...++.++|||||||++|||++|+.|+...... ..... ...+.. +..
T Consensus 170 ---~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~-~~~~~~-----~~~ 234 (308)
T cd06634 170 ---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYH-IAQNES-----PAL 234 (308)
T ss_pred ---cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH------HHHHH-HhhcCC-----CCc
Confidence 346788999999874 356788999999999999999999987542211 11111 111111 111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccC
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVES 361 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~ 361 (407)
........+.+++.+||+.+|++||++.+++.+.+.....
T Consensus 235 ----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 235 ----QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred ----CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 1122345688999999999999999999999998876543
No 353
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.9e-37 Score=279.76 Aligned_cols=245 Identities=24% Similarity=0.277 Sum_probs=189.3
Q ss_pred CeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHH-HcCCCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 88 NLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMI-TSIQHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
+.||+|+||.||+|... +|+.||+|.+..... ......+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999864 589999999854321 12223445555544 445899999999999999999999999999
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
++|..++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----~ 151 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN-----K 151 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceecccc-----c
Confidence 9999998543 45899999999999999999999988 999999999999999999999999999765432 2
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
...++..|+|||.+.+..++.++||||||+++|||++|..||...... ........+... . .....
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~----~---~~~~~ 217 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-------AVFDNILSRRIN----W---PEEVK 217 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcccC----C---CCccc
Confidence 346888999999998888999999999999999999999998643221 111111111111 0 00011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH---HHHHHHhh
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPM---SEIVAMLT 356 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~---~ev~~~l~ 356 (407)
...+..+.+++.+||+.+|++||++ .|++.|.+
T Consensus 218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~ 253 (260)
T cd05611 218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPF 253 (260)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChH
Confidence 1235668999999999999999966 56665544
No 354
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=267.99 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=200.6
Q ss_pred CCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccC
Q 040557 86 PGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 86 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 163 (407)
....||.|..|.|++.+.. .|...|||.+.........++++..++++... ++|+||+.+|+|......++-||.|..
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 3456999999999999864 58999999998877888888999999988877 499999999999999999999999854
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
.++.++.. ..+++++..+-++...+..||.||..++ +|+|||+||+|||+|+.|++||+|||++-.+-+.... +
T Consensus 176 -C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh--t 249 (391)
T KOG0983|consen 176 -CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH--T 249 (391)
T ss_pred -HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccc--c
Confidence 44555543 3455899999999999999999998865 5999999999999999999999999999877654433 3
Q ss_pred ccccCccccCcccccc---CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccC
Q 040557 244 NFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~---~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 320 (407)
...|-+.|||||.+.- ..|+-++||||||+.|+||.||+.|+..-.. ++ +.....+++. .|.+...
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t-dF----e~ltkvln~e------PP~L~~~ 318 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT-DF----EVLTKVLNEE------PPLLPGH 318 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc-cH----HHHHHHHhcC------CCCCCcc
Confidence 4578999999998864 4789999999999999999999999875321 11 1122222211 1333322
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 321 GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 321 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. ..+.++++++..||++|+.+||...++++|--
T Consensus 319 ~---gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F 351 (391)
T KOG0983|consen 319 M---GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF 351 (391)
T ss_pred c---CcCHHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence 1 14567899999999999999999999998853
No 355
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-37 Score=287.99 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=199.2
Q ss_pred CeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 88 NLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
..||+|+||.||++.. .+|+.||+|.+... .......+.+|+.+++.++|+|++++++++...+..+++|||+++++|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 4699999999999986 46899999988533 334556788999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
.+++.. ..+++.....++.|++.|++|||+.+ ++|+||+|+||++++++.++|+|||++........ ......
T Consensus 105 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~~~ 177 (292)
T cd06657 105 TDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLV 177 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc-cccccc
Confidence 988743 34799999999999999999999998 99999999999999999999999999876644322 123356
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
|+..|+|||.+.+..++.++|+||||+++|+|++|..|+....... .. .....+ ..+... .....
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~------~~-~~~~~~-----~~~~~~---~~~~~ 242 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AM-KMIRDN-----LPPKLK---NLHKV 242 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HH-HHHHhh-----CCcccC---CcccC
Confidence 8899999999988889999999999999999999999986432211 11 111110 111111 11123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 327 ALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
+..+.+++.+||+.+|.+||++.+++++-+...
T Consensus 243 ~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~ 275 (292)
T cd06657 243 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275 (292)
T ss_pred CHHHHHHHHHHHhCCcccCcCHHHHhcChHHhc
Confidence 445788999999999999999999999866543
No 356
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.6e-37 Score=293.68 Aligned_cols=260 Identities=22% Similarity=0.341 Sum_probs=195.4
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC------C
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG------S 152 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 152 (407)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|+.+++.++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47888889999999999999985 468999999986432 222345678999999999999999999998654 2
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..++|+||+.+ +|..+. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 46899999964 676654 234899999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-----
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER----- 306 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----- 306 (407)
...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ........
T Consensus 166 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~ 235 (342)
T cd07879 166 HADAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPG 235 (342)
T ss_pred CCCCCC----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhcCCCC
Confidence 653322 23467889999998876 468999999999999999999999997543211 11111110
Q ss_pred ---------CccccccC--cccccCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 307 ---------GRILELVD--PRMRKEGI---VERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 307 ---------~~~~~~~d--~~~~~~~~---~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
......+. +....... .......+.+++.+||+.||++||++.+++.|-+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~ 301 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFD 301 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchh
Confidence 00000000 00000000 011234578999999999999999999999986654
No 357
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.4e-37 Score=290.27 Aligned_cols=274 Identities=24% Similarity=0.316 Sum_probs=203.1
Q ss_pred CHHHHHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeec
Q 040557 73 DFQTLKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSD 150 (407)
Q Consensus 73 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 150 (407)
...++....++|++.+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|++++++++|+||+++.+++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456677889999999999999999999975 468999999986432 22334568899999999999999999998754
Q ss_pred C------CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceE
Q 040557 151 G------SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSK 224 (407)
Q Consensus 151 ~------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~k 224 (407)
. ...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEE
Confidence 3 3467888876 7799888743 34899999999999999999999998 99999999999999999999
Q ss_pred EecccCccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHH----
Q 040557 225 IGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEY---- 299 (407)
Q Consensus 225 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~---- 299 (407)
|+|||++....... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ +...
T Consensus 161 l~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~ 234 (345)
T cd07877 161 ILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ--LKLILRLV 234 (345)
T ss_pred Eecccccccccccc----cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHh
Confidence 99999998653322 23567889999998866 5688999999999999999999999854322110 0000
Q ss_pred ------HHHHHHhCccccccC--cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 300 ------AWKLYERGRILELVD--PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 300 ------~~~~~~~~~~~~~~d--~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
....+........+. +..... .........+.+++.+|++.||++||++.+++++-+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 000000000000000 000000 000012446789999999999999999999999987653
No 358
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.9e-36 Score=282.75 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=196.0
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
|...+.||+|+||.||+|+.. +|..|++|.+.... .......+.+|+++++.++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 455577999999999999864 68899999986432 223445788999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
+. |++.+++... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~--- 174 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSPA--- 174 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCCC---
Confidence 96 5777766533 345899999999999999999999998 999999999999999999999999998643322
Q ss_pred cccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 241 LSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
....|+..|+|||.+. ...++.++||||||+++|||++|..|+....... ....... ... +..
T Consensus 175 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~-~~~-----~~~ 240 (313)
T cd06633 175 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQ-NDS-----PTL 240 (313)
T ss_pred --CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHh-cCC-----CCC
Confidence 2356888999999874 4568899999999999999999999986432211 1111111 111 111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. .......+.+++.+||+.+|++||++.+++.+-+..
T Consensus 241 ~----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~ 277 (313)
T cd06633 241 Q----SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVR 277 (313)
T ss_pred C----ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence 1 111234588999999999999999999999987654
No 359
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=312.10 Aligned_cols=264 Identities=24% Similarity=0.221 Sum_probs=214.1
Q ss_pred HHHHHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC
Q 040557 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152 (407)
Q Consensus 76 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 152 (407)
.++...++|.+.++||+|+||.|..+++. +++.||.|++.+.. ......-|..|-.+|..-+.+-|+.+...|.+..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 34445578888999999999999999864 68999999996533 2234456888999999989999999999999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
++|+|||||+||+|-.++.... .+++..+..++..|..||.-||+.| +|||||||+|||||..|.+||+|||.+.
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHH
Confidence 9999999999999999985433 6999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCcccccccccCccccCccccc----c-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAI----R-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG 307 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 307 (407)
.+..+....+...+|||-|++||++. + +.|+...|.||+||++|||+.|..||+... +.+.+.+.+.-.
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lveTY~KIm~hk 297 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVETYGKIMNHK 297 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHHHHHHHhchh
Confidence 99888877788889999999999885 2 678999999999999999999999997432 233333333321
Q ss_pred ccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHhhccc
Q 040557 308 RILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP---MSEIVAMLTCKV 359 (407)
Q Consensus 308 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~ev~~~l~~~~ 359 (407)
...... .....+.+..+||+..+. +|+.|.. +.++..|..+..
T Consensus 298 ~~l~FP--------~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 298 ESLSFP--------DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred hhcCCC--------cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccC
Confidence 111111 001234567777777665 7888888 999999987643
No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.1e-37 Score=290.18 Aligned_cols=268 Identities=24% Similarity=0.296 Sum_probs=198.0
Q ss_pred cCCC-CCCeeeccCCccEEEEEec-CCcEEEEEEeccccChh-------------hHHHHHHHHHHHHcCCCCceeeeee
Q 040557 82 KNFH-PGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQ-------------GESEFLSEVRMITSIQHKNLVRLLG 146 (407)
Q Consensus 82 ~~~~-~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------~~~~~~~e~~~l~~l~h~niv~l~~ 146 (407)
++|. +.+.||+|+||.||+|... +++.||+|.+....... ....+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 3567999999999999854 68999999985432211 0124779999999999999999999
Q ss_pred eeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEe
Q 040557 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIG 226 (407)
Q Consensus 147 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~ 226 (407)
++...+..++||||+. |+|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEEC
Confidence 9999999999999997 588888843 345899999999999999999999988 9999999999999999999999
Q ss_pred cccCccccCCCC-------------cccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcc
Q 040557 227 DFGLARFFPEDQ-------------AYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSE 292 (407)
Q Consensus 227 Dfgla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~ 292 (407)
|||++....... ........++..|+|||.+.+. .++.++|||||||++|||++|+.||......+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999998665111 0111223467889999988764 46899999999999999999999986543211
Q ss_pred cCchhHHHHHHHHhCcc-----------ccccCccccc--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 293 MQYLPEYAWKLYERGRI-----------LELVDPRMRK--EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 293 ~~~~~~~~~~~~~~~~~-----------~~~~d~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
. ............. .......... ..........+.+++.+||+.+|++|||++|++.+.|..
T Consensus 242 ~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 242 Q---LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred H---HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence 0 0011111000000 0000000000 000112245688999999999999999999999998874
No 361
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.5e-37 Score=289.51 Aligned_cols=272 Identities=24% Similarity=0.321 Sum_probs=201.2
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC--
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS-- 152 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 152 (407)
+....++|+..+.||+|+||.||+|.. .+|..||||++.... .......+.+|+++++.++|+||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 444567899999999999999999974 478999999985432 2333456889999999999999999999886543
Q ss_pred ----eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecc
Q 040557 153 ----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDF 228 (407)
Q Consensus 153 ----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 228 (407)
..++||||+ +++|..++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeec
Confidence 458999998 7789888743 35899999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------chhHH
Q 040557 229 GLARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YLPEY 299 (407)
Q Consensus 229 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~~~~ 299 (407)
|++....... ....+++.|+|||.+.+ ..++.++|+||||+++|+|++|+.||......... .....
T Consensus 163 g~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 163 GLARQTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238 (343)
T ss_pred ccccccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9998654322 23467889999998876 45889999999999999999999998643221000 00000
Q ss_pred HHHHHHhCccccccC--cccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 300 AWKLYERGRILELVD--PRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 300 ~~~~~~~~~~~~~~d--~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
....+........+. +..... .........+.+++.+|++.||++|||+.+++.+-+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 000000000000000 000000 001122345889999999999999999999998877643
No 362
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4e-37 Score=287.02 Aligned_cols=268 Identities=24% Similarity=0.337 Sum_probs=195.2
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChh-hHHHHHHHHHHHHcCCCCceeeeeeeeecC-------
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSIQHKNLVRLLGCCSDG------- 151 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 151 (407)
.++|++.+.||+|+||.||+|... +++.+|+|++....... ....+.+|+++++.++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478889999999999999999864 68999999986443222 234567899999999999999999887443
Q ss_pred -CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccC
Q 040557 152 -SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGL 230 (407)
Q Consensus 152 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 230 (407)
...++|+||+.+ ++...+... ...+++..+..++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCcc
Confidence 346999999975 666666432 345899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCcc----------cccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHH
Q 040557 231 ARFFPEDQAY----------LSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 231 a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~ 299 (407)
+......... ......+++.|+|||.+.+. .++.++||||||+++|||++|++||......... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~---~~ 238 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL---HL 238 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH---HH
Confidence 9865432211 11234568889999987654 5789999999999999999999998654332100 00
Q ss_pred HHHHHHh---------Ccccccc----CcccccC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 300 AWKLYER---------GRILELV----DPRMRKE--GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 300 ~~~~~~~---------~~~~~~~----d~~~~~~--~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
....... ..+.... ....... .........+.+++.+||+.||++|||+.+++.+-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~ 310 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCC
Confidence 0000000 0000000 0000000 000112256889999999999999999999998754
No 363
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-38 Score=272.75 Aligned_cols=250 Identities=24% Similarity=0.284 Sum_probs=203.2
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|...++||+|.||.|.+++- .+|+.+|+|+++++. ..+....-+.|-++|...+||.+..+...|...+.+|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 6788889999999999999984 479999999997653 3344455678999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
||..||.|..++ .+.+.+++.....+-..|+.||.|||+.+ |+.||||.+|.|+|.+|.+||+||||++.--...
T Consensus 248 eyanGGeLf~HL--srer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 248 EYANGGELFFHL--SRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEccCceEeeeh--hhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhccccc
Confidence 999999998887 34556888888889999999999999998 9999999999999999999999999998543222
Q ss_pred cccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccc
Q 040557 239 AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMR 318 (407)
Q Consensus 239 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 318 (407)
. ...+++|||.|+|||++....|...+|.|.+||++|||++|+.||....... ...++.-+ .+
T Consensus 323 ~-t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k-------LFeLIl~e--------d~- 385 (516)
T KOG0690|consen 323 D-TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK-------LFELILME--------DL- 385 (516)
T ss_pred c-eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH-------HHHHHHhh--------hc-
Confidence 2 3456899999999999999999999999999999999999999997543221 11111111 11
Q ss_pred cCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHh
Q 040557 319 KEGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAML 355 (407)
Q Consensus 319 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l 355 (407)
.++.....+...|+.-.|.+||.+|.. +.||.+|-
T Consensus 386 --kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 386 --KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred --cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 133334456778888899999999963 66776653
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.2e-37 Score=290.72 Aligned_cols=264 Identities=21% Similarity=0.299 Sum_probs=195.8
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC---------
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG--------- 151 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------- 151 (407)
.+|...+.||.|+||.||+|.. .+|+.||+|.+..... .....+.+|+++++.++|+||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 6788889999999999999986 4689999999864433 4456788999999999999999999776543
Q ss_pred -----CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc-CCCceEE
Q 040557 152 -----SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD-EKFQSKI 225 (407)
Q Consensus 152 -----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~-~~~~~kl 225 (407)
...++||||++ ++|..++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++ +++.++|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence 35789999997 588887742 34889999999999999999999998 99999999999997 5567899
Q ss_pred ecccCccccCCCCccc--ccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHH
Q 040557 226 GDFGLARFFPEDQAYL--STNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK 302 (407)
Q Consensus 226 ~Dfgla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~ 302 (407)
+|||++.......... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....+... ...
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~------~~~ 230 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ------MQL 230 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHH
Confidence 9999998654322111 122357889999997654 5678899999999999999999999965432110 000
Q ss_pred HHHhC---------ccccccCccc----ccC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 303 LYERG---------RILELVDPRM----RKE-----GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 303 ~~~~~---------~~~~~~d~~~----~~~-----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
..... .....+...+ ... .........+.+++.+||+.||++|||+.+++.+-+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 00000 0000000000 000 001113356789999999999999999999999988753
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.2e-36 Score=276.50 Aligned_cols=252 Identities=24% Similarity=0.359 Sum_probs=196.5
Q ss_pred CCCCCCeeeccCCccEEEEEecC-CcEEEEEEecccc----ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDK----SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 157 (407)
+|.+.+.||+|+||.||++.... +..+++|.++... .......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788999999999999997643 4445555553211 222334567899999999999999999999999999999
Q ss_pred EEeccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 158 YEYMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
|||+++++|..++.. .....+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++ +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999988853 23456899999999999999999999988 999999999999986 469999999998664
Q ss_pred CCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCc
Q 040557 236 EDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDP 315 (407)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 315 (407)
.... ......|++.|+|||.+.+..++.++|+||||+++|+|++|..|+..... ........ .+. .+
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~~-~~~-----~~ 223 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRIV-EGP-----TP 223 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHH-cCC-----CC
Confidence 4322 12235678899999999888889999999999999999999999853211 11111111 111 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 316 RMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 316 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
. .+...+..+.+++.+||+.+|++||++.+++++-+
T Consensus 224 ~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 259 (260)
T cd08222 224 S-----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259 (260)
T ss_pred C-----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence 1 12334567899999999999999999999998754
No 366
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7.5e-37 Score=281.08 Aligned_cols=267 Identities=26% Similarity=0.347 Sum_probs=200.1
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
|+..+.||+|++|.||+|... +++.+|+|.+.... .......+.+|+.+++.++|+|++++++++.+....++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999865 58999999986543 2233456788999999999999999999999999999999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
+ ++|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++.........
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~- 154 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT- 154 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCccc-
Confidence 7 58999986543 35899999999999999999999998 999999999999999999999999999876543321
Q ss_pred ccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccC-c-------hhHHHHHHHHhCccccc
Q 040557 242 STNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ-Y-------LPEYAWKLYERGRILEL 312 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~ 312 (407)
.....++..|+|||.+.+. .++.++||||||+++|||++|+.||......+.. . .....+.....-.....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 2234467789999998776 8899999999999999999999888654321100 0 00000000000000000
Q ss_pred cCcccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 313 VDPRMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 313 ~d~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.-+..... .........+.+++..||+.+|++||++.+++.+-|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~ 281 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence 00000000 000112457899999999999999999999998765
No 367
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=266.76 Aligned_cols=290 Identities=21% Similarity=0.239 Sum_probs=220.0
Q ss_pred HhcCCCCC-CeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeec----CC
Q 040557 80 ATKNFHPG-NLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSD----GS 152 (407)
Q Consensus 80 ~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~ 152 (407)
.+++|++. ++||-|-.|.|-.+.. .+|+.+|+|++... . ...+|+++-... .|+|||.++++|++ ..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--P----KARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--H----HHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 34566553 4799999999999865 46899999988422 1 235788877666 69999999998864 34
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc---CCCceEEeccc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD---EKFQSKIGDFG 229 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~---~~~~~kl~Dfg 229 (407)
.+.+|||+|+||.|...+..+....+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.+ .|..+||+|||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence 5679999999999999998888888999999999999999999999998 99999999999997 45679999999
Q ss_pred CccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI 309 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (407)
+|+.-..... ..+-+-|+.|.|||++....|+...|+||+||++|-|++|-+||......- ++--....+..|..
T Consensus 210 FAK~t~~~~~--L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---ispgMk~rI~~gqy 284 (400)
T KOG0604|consen 210 FAKETQEPGD--LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---ISPGMKRRIRTGQY 284 (400)
T ss_pred cccccCCCcc--ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---CChhHHhHhhccCc
Confidence 9986543322 234678999999999999999999999999999999999999997654311 11111111221111
Q ss_pred ccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccccCCCCCCchhhHhhccccCCCCCCcccccC
Q 040557 310 LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIPVRPAYLERRRKRDETLSWDTISEPF 389 (407)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 389 (407)
+.-++ .-...+....++|+.+|..+|++|.|+.+++.|-|-.....+|..|..-..... .....|+...+..
T Consensus 285 -~FP~p------EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~t~~~l~-~a~e~w~dvqeem 356 (400)
T KOG0604|consen 285 -EFPEP------EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLSTSRMLK-EAVEAWDDVQEEM 356 (400)
T ss_pred -cCCCh------hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCchhhhhcc-hhhhhhHHHHHHH
Confidence 01111 112345677899999999999999999999999998888888877654433322 2334477665544
Q ss_pred CC
Q 040557 390 PS 391 (407)
Q Consensus 390 ~~ 391 (407)
++
T Consensus 357 ~~ 358 (400)
T KOG0604|consen 357 TE 358 (400)
T ss_pred HH
Confidence 43
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=7.1e-37 Score=289.32 Aligned_cols=263 Identities=24% Similarity=0.346 Sum_probs=200.1
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCe----
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQ---- 153 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 153 (407)
..++|+..+.||+|++|.||+|+.. ++..||+|++.... .......+.+|+.+++.++|+|++++.+++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4577888899999999999999864 58899999885432 22334567889999999999999999988765554
Q ss_pred --eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 154 --RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 154 --~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
.++|+||+ +++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999998 6699888853 35899999999999999999999988 999999999999999999999999999
Q ss_pred cccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh-Cc-
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER-GR- 308 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~- 308 (407)
...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ........ +.
T Consensus 166 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~------~~~~i~~~~~~~ 235 (343)
T cd07851 166 RHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID------QLKRIMNLVGTP 235 (343)
T ss_pred cccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHHhcCCC
Confidence 866433 223467889999998765 467899999999999999999999986433211 11111000 00
Q ss_pred ------------cccccCc--ccccC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 309 ------------ILELVDP--RMRKE---GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 309 ------------~~~~~d~--~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
....+.. ..... ......+..+.+++.+||+.+|++|||+.+|+++-+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 0000000 00000 000112457889999999999999999999999977643
No 369
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.7e-36 Score=285.50 Aligned_cols=268 Identities=23% Similarity=0.286 Sum_probs=193.8
Q ss_pred CCCCCCeeeccCCccEEEEEec-C--CcEEEEEEecccc-ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeec----CCe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-D--GTLVAVKKLCVDK-SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSD----GSQ 153 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 153 (407)
+|++.+.||+|+||.||+++.. + +..||+|.+.... .......+.+|++++.++ +|+||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677789999999999999864 3 7789999985432 222345678999999999 59999999987532 245
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.++++||+. ++|..++. ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788899886 58888874 3456899999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCcc---cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC---------chhHHH
Q 040557 234 FPEDQAY---LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ---------YLPEYA 300 (407)
Q Consensus 234 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~---------~~~~~~ 300 (407)
+...... ......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||......... ......
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 6432221 1123568999999998765 46899999999999999999999998653311000 000000
Q ss_pred HHHHHhCccccc---cC--cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 301 WKLYERGRILEL---VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 301 ~~~~~~~~~~~~---~d--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
... ........ .+ +..............+.+++.+||+.||++|||+.+++.+-+.
T Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~ 295 (332)
T cd07857 235 SRI-GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295 (332)
T ss_pred Hhh-hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 000 00000000 00 0000000001124568899999999999999999999988664
No 370
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.4e-36 Score=272.69 Aligned_cols=243 Identities=27% Similarity=0.309 Sum_probs=196.8
Q ss_pred eeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
||.|+||.||++... +++.+|+|.+..... ......+..|+.++++++|+|++++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999865 589999999865432 23456788999999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
.+++... ..+++.....++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++........ ......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~ 154 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS-RTNTFC 154 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCC-cccCCc
Confidence 9998543 35899999999999999999999988 99999999999999999999999999987654321 123456
Q ss_pred cCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
++..|++||...+...+.++|+||||+++|+|++|+.||..... ......... +. . ..+...
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~-~~--------~---~~~~~~ 216 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR------KEIYEKILK-DP--------L---RFPEFL 216 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhc-CC--------C---CCCCCC
Confidence 88899999999888899999999999999999999999864322 111111111 10 0 111222
Q ss_pred HHHHHHHHHHccCCCCCCCCCH---HHHHHHhh
Q 040557 327 ALQVINVAFICLQPHGNQRPPM---SEIVAMLT 356 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs~---~ev~~~l~ 356 (407)
+..+.+++.+||+.||++||++ ++++.+.+
T Consensus 217 ~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~ 249 (250)
T cd05123 217 SPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249 (250)
T ss_pred CHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCC
Confidence 4568899999999999999999 77776644
No 371
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.4e-36 Score=308.94 Aligned_cols=146 Identities=26% Similarity=0.401 Sum_probs=130.3
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
++|++.+.||+|+||.||+|... +++.||+|++.... .......+..|+.++..++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888899999999999999865 68999999986432 2333467889999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
||+.+++|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998543 45889999999999999999999988 9999999999999999999999999986
No 372
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-37 Score=273.08 Aligned_cols=261 Identities=24% Similarity=0.304 Sum_probs=209.9
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEec------CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeee-
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS- 149 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~- 149 (407)
+.....+++...++-+|.||.||.|.+. +.+.|-+|.++...++-+...++.|.-.+..+.|||+..+.+++.
T Consensus 279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 4444567888888999999999999543 345678888877777777888999999999999999999999885
Q ss_pred cCCeeEEEEEeccCCChhHHHhccC------CCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCce
Q 040557 150 DGSQRLLVYEYMKNRSLDLLIYGES------DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS 223 (407)
Q Consensus 150 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~ 223 (407)
+....++++.++.-|+|..++...+ .+.++......++.|++.|++|||+++ ++|.||..+|.++|+...+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqV 435 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQV 435 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeE
Confidence 4567789999999999999997322 345677788889999999999999998 9999999999999999999
Q ss_pred EEecccCccccC-CCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHH
Q 040557 224 KIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 224 kl~Dfgla~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~ 301 (407)
||+|-.+++.+- .+......+...+..||+||.+.+..|+..+||||||++||||+| |+.|+..-.|.+ ..
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------m~ 508 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------ME 508 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-------HH
Confidence 999999998653 333333334456778999999999999999999999999999998 666665433332 22
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.++.+|. ++. .+.+++.++..++..||..+|++||++.|++.-|..
T Consensus 509 ~ylkdGy-------Rla---QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 509 HYLKDGY-------RLA---QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred HHHhccc-------eec---CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 2333331 222 345678889999999999999999999999988754
No 373
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=294.98 Aligned_cols=263 Identities=26% Similarity=0.389 Sum_probs=216.1
Q ss_pred cCHHHHHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeee
Q 040557 72 FDFQTLKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCS 149 (407)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 149 (407)
.+++.+...++.|++.+.||+|.+|.||+++. ++|+..|+|+..... +..+++..|.++|+.. +|||++.++|++.
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~--d~deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE--DEEEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc--cccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 45555666678899999999999999999974 578999999886544 3344566788888887 7999999999984
Q ss_pred -----cCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceE
Q 040557 150 -----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSK 224 (407)
Q Consensus 150 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~k 224 (407)
.++++|||||||.+||..+++.+..+..+.|..+..|+..++.|+.+||.+. ++|||||-.|||++.++.||
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEE
Confidence 3568999999999999999998888888999999999999999999999988 99999999999999999999
Q ss_pred EecccCccccCCCCcccccccccCccccCccccccC-----CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHH
Q 040557 225 IGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-----ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEY 299 (407)
Q Consensus 225 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~ 299 (407)
|+|||++..+..... ...+.+||+.|||||++... .|+.++|+||||++..||.-|.+|+....+...-+
T Consensus 164 LvDFGvSaQldsT~g-rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF---- 238 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTVG-RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF---- 238 (953)
T ss_pred Eeeeeeeeeeecccc-cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc----
Confidence 999999987754433 23457899999999998753 56789999999999999999999987554432111
Q ss_pred HHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 300 AWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 300 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
. +...-.|.+. -+.....++.++|..||.+|-++||++.++++|-
T Consensus 239 -----~---IpRNPPPkLk---rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 239 -----L---IPRNPPPKLK---RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred -----c---CCCCCCcccc---chhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 0 1111112222 3467788999999999999999999999999874
No 374
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=273.11 Aligned_cols=260 Identities=27% Similarity=0.395 Sum_probs=202.3
Q ss_pred HhcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhh------HHHHHHHHHHHHcCCCCceeeeeeeee-cC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG------ESEFLSEVRMITSIQHKNLVRLLGCCS-DG 151 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~------~~~~~~e~~~l~~l~h~niv~l~~~~~-~~ 151 (407)
..++|-+..+||+|||+.||+|. +...+.||||+-...+.... .+...+|.++-+.|+||.||++++++. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 34566677889999999999996 55688999998755443322 245678999999999999999999985 55
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC---CCceEEecc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE---KFQSKIGDF 228 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~---~~~~kl~Df 228 (407)
+.+|-|.|||+|.+|+.++.. .+.+++.++..|+.||+.||.||.... +||+|-||||.||||.+ .|.+||+||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccceeeeeecCCCchhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeec
Confidence 678999999999999999954 456899999999999999999999874 78999999999999964 478999999
Q ss_pred cCccccCCCCcc------cccccccCccccCccccccC----CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhH
Q 040557 229 GLARFFPEDQAY------LSTNFAGTLGYTAPEYAIRG----ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298 (407)
Q Consensus 229 gla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~ 298 (407)
||++.+.++... .++...||.+|++||.+.-+ ..+.|+||||.||++|..+.|+.||......
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ------- 690 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ------- 690 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH-------
Confidence 999998765432 23456799999999987533 5689999999999999999999999754322
Q ss_pred HHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 299 YAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 299 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
...+..+.+...-.-.+. ..+....+...+|++||+..-++|....++..+
T Consensus 691 --QdILqeNTIlkAtEVqFP---~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 691 --QDILQENTILKATEVQFP---PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred --HHHHhhhchhcceeccCC---CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 223333433322222221 112234557789999999999999877776654
No 375
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-38 Score=266.38 Aligned_cols=253 Identities=24% Similarity=0.332 Sum_probs=195.4
Q ss_pred CCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 87 GNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
...||.|+||+|++-.+ +.|+..|||++........+.+++.|.+...+- +.||||+++|.+...+..|+-||.|.-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 34699999999999875 469999999998777777788899999876655 799999999999999999999999964
Q ss_pred ChhHH---HhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccc
Q 040557 165 SLDLL---IYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 165 ~L~~~---l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 241 (407)
||+.+ .+.-....+++.-.-.|+.....||.||...- .|+|||+||+|||++..|.+||+|||++-.+.+.-.
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA-- 223 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA-- 223 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHHH--
Confidence 66543 33334456889988899999999999998754 599999999999999999999999999986654332
Q ss_pred ccccccCccccCcccccc--CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 242 STNFAGTLGYTAPEYAIR--GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
.+.-.|-..|||||.+.. ..|+-+|||||||++|+|+.||+.|+..-.. .-+.+.. +..|.. |.+..
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~-Vv~gdp-----p~l~~ 292 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQ-VVIGDP-----PILLF 292 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHH-HHcCCC-----CeecC
Confidence 234468889999999864 4589999999999999999999999763211 1111111 111211 11211
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
..........+..++..|+.+|-+.||+..++.++-
T Consensus 293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~ 328 (361)
T KOG1006|consen 293 DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFP 328 (361)
T ss_pred cccccccCHHHHHHHHHHhhcccccCcchhhhhcCc
Confidence 111223456788999999999999999999998753
No 376
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1e-36 Score=264.20 Aligned_cols=275 Identities=21% Similarity=0.296 Sum_probs=201.0
Q ss_pred cCCCCCCeeeccCCccEEEEEec---C--CcEEEEEEeccccChhhH-HHHHHHHHHHHcCCCCceeeeeeeeec-CCee
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA---D--GTLVAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNLVRLLGCCSD-GSQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 154 (407)
..|+....||+|.||.||+|.-. + .+.+|+|+++..+...+. ....+|+.+++.++|+|++.+..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 45777889999999999999532 2 347999999766443332 345699999999999999999998876 7788
Q ss_pred EEEEEeccCCChhHHHhcc---CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC----CceEEec
Q 040557 155 LLVYEYMKNRSLDLLIYGE---SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK----FQSKIGD 227 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~----~~~kl~D 227 (407)
++++||.+. +|.++++-. ..+.++...+..|+.||+.|+.|||++= |+||||||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 999999987 777777532 2457899999999999999999999987 9999999999999877 8999999
Q ss_pred ccCccccCCCCcc--cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC---chhHHHH
Q 040557 228 FGLARFFPEDQAY--LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ---YLPEYAW 301 (407)
Q Consensus 228 fgla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~---~~~~~~~ 301 (407)
||+++.+.+.-.. ....++-|..|.|||.+.+ ..||.+.||||.||++.||+|-.+.|......... +-.+...
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 9999988754332 2345678999999999887 57899999999999999999988877543221111 1111111
Q ss_pred HHHHh-CccccccCccc-------------ccCCCCH----H-------HHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 302 KLYER-GRILELVDPRM-------------RKEGIVE----R-------DALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 302 ~~~~~-~~~~~~~d~~~-------------~~~~~~~----~-------~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+.++- |.-.+..-|.+ +...... . -+...++|+..+|+.||-+|.|+++.+++.-
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 11110 00000000000 0000000 0 1123778999999999999999999999987
Q ss_pred cccc
Q 040557 357 CKVE 360 (407)
Q Consensus 357 ~~~~ 360 (407)
+..+
T Consensus 340 F~~d 343 (438)
T KOG0666|consen 340 FTED 343 (438)
T ss_pred cccC
Confidence 6543
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=9.7e-36 Score=266.83 Aligned_cols=226 Identities=19% Similarity=0.125 Sum_probs=179.0
Q ss_pred cCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChhHHHh
Q 040557 93 GGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIY 171 (407)
Q Consensus 93 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~ 171 (407)
|.+|.||+++. .+|+.||+|.+.... .+.+|...+....|||++++++++.+.+..+++|||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 89999999986 468999999985432 22345555555679999999999999999999999999999999885
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccccCccc
Q 040557 172 GESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251 (407)
Q Consensus 172 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y 251 (407)
.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++....... ....++..|
T Consensus 78 ~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~y 148 (237)
T cd05576 78 KF--LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----DGEAVENMY 148 (237)
T ss_pred Hh--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc----ccCCcCccc
Confidence 43 35899999999999999999999988 9999999999999999999999999887654322 223467789
Q ss_pred cCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHH
Q 040557 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVI 331 (407)
Q Consensus 252 ~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 331 (407)
+|||...+..++.++||||+|+++|||++|+.++........ .. . .+ ..+......+.
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~------------~~-----~--~~---~~~~~~~~~~~ 206 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN------------TH-----T--TL---NIPEWVSEEAR 206 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc------------cc-----c--cc---CCcccCCHHHH
Confidence 999999888899999999999999999999987643211100 00 0 00 01122345688
Q ss_pred HHHHHccCCCCCCCCCH-----HHHHHHh
Q 040557 332 NVAFICLQPHGNQRPPM-----SEIVAML 355 (407)
Q Consensus 332 ~l~~~cl~~~p~~RPs~-----~ev~~~l 355 (407)
+++.+||+.||++||++ .+++.|-
T Consensus 207 ~li~~~l~~dp~~R~~~~~~~~~~~~~h~ 235 (237)
T cd05576 207 SLLQQLLQFNPTERLGAGVAGVEDIKSHP 235 (237)
T ss_pred HHHHHHccCCHHHhcCCCccchHHHHcCC
Confidence 99999999999999996 6666553
No 378
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=262.88 Aligned_cols=267 Identities=23% Similarity=0.299 Sum_probs=205.8
Q ss_pred HHHHHHHhcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecC
Q 040557 74 FQTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDG 151 (407)
Q Consensus 74 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 151 (407)
|+++-+.++ +.||+|+|+.|--+. +.+|..||||++.+. ......++.+|++++.++ .|+||+.++.||++.
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 444444443 679999999999886 678999999999654 445567889999999999 599999999999999
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC---ceEEecc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF---QSKIGDF 228 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~---~~kl~Df 228 (407)
..+|||||-|.||+|..++.. ++-+++.++.++..+|+.||.|||.+| |.|||+||+|||-.... .+||+||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~--~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQK--RKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHH--hhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecc
Confidence 999999999999999998854 445999999999999999999999999 99999999999997543 5799999
Q ss_pred cCccccC--CCC----cccccccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchh
Q 040557 229 GLARFFP--EDQ----AYLSTNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297 (407)
Q Consensus 229 gla~~~~--~~~----~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~ 297 (407)
.|..-.. .+- .....+-+|+..|||||+.. ...|+.+.|.||||||||-|++|.+||.+....+..+-.
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 9885432 111 11223457888999999764 246899999999999999999999999877665443221
Q ss_pred --------HHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 298 --------EYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 298 --------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+..-+++|.. +..|... ...+.+..+++...+..|+.+|.++.+++.|.|..
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkY-eFPdkdW------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~ 365 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKY-EFPDKDW------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ 365 (463)
T ss_pred CCccHHHHHHHHHHHhccCC-cCChhhh------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence 112222232221 1111111 12345567788888999999999999999988753
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-36 Score=282.08 Aligned_cols=243 Identities=24% Similarity=0.245 Sum_probs=197.3
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 158 (407)
+..|.....+|.|+|+.|-.+.. .+++..++|++..... +-.+|+.++... +|+||+++.+.+.++.+.|+||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 56788888899999999988864 5688999999965421 223567666655 7999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEE-cCCCceEEecccCccccCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL-DEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill-~~~~~~kl~Dfgla~~~~~~ 237 (407)
|.+.++-+.+.+.... .....+..|+.+|+.|+.|||++| ++||||||+|||+ ++.++++|+|||.++..+.+
T Consensus 396 e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999988777664332 222777889999999999999998 9999999999999 58999999999999987665
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
...-+-|..|.|||+.....||+++|+||||++||+|++|+.|+...... ..+...+..+
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~---------- 529 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMP---------- 529 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCC----------
Confidence 12335688999999999999999999999999999999999999765443 1122222222
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.+....+....+|+.+||+.||.+||+|.++..|-|.
T Consensus 530 ---~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 530 ---KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ---ccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 1223445678899999999999999999999999987
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-36 Score=276.43 Aligned_cols=251 Identities=25% Similarity=0.298 Sum_probs=203.3
Q ss_pred CCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 87 GNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
.++||+|.||+||-|++ ++|+.||||++.+.. ....+..+.+|+.+|..++||.||.+--.|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 37899999999999975 579999999997654 344557889999999999999999999999999999999999965
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC---CceEEecccCccccCCCCccc
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK---FQSKIGDFGLARFFPEDQAYL 241 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~---~~~kl~Dfgla~~~~~~~~~~ 241 (407)
+..+.+.......+++.....+..||+.||.|||.++ |+|+||||+|||+.+. ..+||+|||.|++++....
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-- 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-- 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhh--
Confidence 5545544444556898888889999999999999998 9999999999999744 4699999999999876553
Q ss_pred ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCC
Q 040557 242 STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEG 321 (407)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 321 (407)
...++||+.|+|||++.++.|...-|+||.||++|--++|..||..+.. +...++.... |-...
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd---------IndQIQNAaF-------MyPp~ 786 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED---------INDQIQNAAF-------MYPPN 786 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc---------hhHHhhcccc-------ccCCC
Confidence 3567899999999999999999999999999999999999999964321 1111111100 11111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 322 IVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 322 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.-.+.....+++|...||..-++|-|.+.-+.|.|...
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 12234567889999999999999999999999988543
No 381
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=279.30 Aligned_cols=254 Identities=22% Similarity=0.286 Sum_probs=211.0
Q ss_pred CCCCCCeeeccCCccEEEEEecCCc-EEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLADGT-LVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
++.....||-|+||.|=+++.+... .+|+|++++.. ...+++.+..|-++|..++.+.||+++--|.+....|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 4455567999999999999865433 48999886543 45667788999999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
-|-||.|...+. .++.++..+...++..+++|++|||+++ |+.|||||+|.+|+.+|-+||.|||+|+.+.....
T Consensus 501 aClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 501 ACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred hhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 999999999984 4556899999999999999999999999 99999999999999999999999999998876654
Q ss_pred ccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccccc
Q 040557 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 319 (407)
. -+++|||.|.|||++.++..+.++|.||||+++|||++|++||....+... +..+-.| +| .
T Consensus 576 T--wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt-------Yn~ILkG-----id----~ 637 (732)
T KOG0614|consen 576 T--WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT-------YNLILKG-----ID----K 637 (732)
T ss_pred e--eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH-------HHHHHhh-----hh----h
Confidence 3 468999999999999999999999999999999999999999987655321 1111111 11 1
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhhccc
Q 040557 320 EGIVERDALQVINVAFICLQPHGNQRPP-----MSEIVAMLTCKV 359 (407)
Q Consensus 320 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~ev~~~l~~~~ 359 (407)
-.++........++++..+..+|.+|.. +.+|.+|-|+..
T Consensus 638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 638 IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 1133334556788999999999999986 899999998753
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.9e-35 Score=292.40 Aligned_cols=264 Identities=23% Similarity=0.300 Sum_probs=173.4
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-C----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeee------e
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-D----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC------C 148 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~ 148 (407)
..++|.+.+.||+|+||.||+|.+. + +..||+|++..... .+.+..+ .+....+.++..++.. +
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 4578999999999999999999864 4 68999998753221 1111111 1111122222222211 2
Q ss_pred ecCCeeEEEEEeccCCChhHHHhccCCC------------------CCCHHHHHHHHHHHHHHhccccccCCCceeeecc
Q 040557 149 SDGSQRLLVYEYMKNRSLDLLIYGESDK------------------FLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDI 210 (407)
Q Consensus 149 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------------~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dl 210 (407)
......++||||+.+++|.+++...... ......+..++.|++.||.|||+.+ |+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcC
Confidence 4566789999999999999888643211 1123345678999999999999988 999999
Q ss_pred ccccEEEcC-CCceEEecccCccccCCCCcccccccccCccccCccccccC----------------------CCCcccc
Q 040557 211 KASNVLLDE-KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG----------------------ELSEKAD 267 (407)
Q Consensus 211 k~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~k~D 267 (407)
||+|||+++ ++.+||+|||+++.+............+++.|+|||.+... .++.++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999985 67999999999987655444444567889999999965322 2345679
Q ss_pred EEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc-----ccccCcccccC-----CCCHHHHHHHHHHHHHc
Q 040557 268 IYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI-----LELVDPRMRKE-----GIVERDALQVINVAFIC 337 (407)
Q Consensus 268 v~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~d~~~~~~-----~~~~~~~~~l~~l~~~c 337 (407)
||||||+||||+++..+.+... ..+. ..+..... ...+.+....+ ...........+|+.+|
T Consensus 362 VwSlGviL~el~~~~~~~~~~~-------~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNL-------IQFN-RQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHH-------HHHH-HHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence 9999999999999766543211 0010 01110000 00011110000 00001122355899999
Q ss_pred cCCCCCCCCCHHHHHHHhhccc
Q 040557 338 LQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 338 l~~~p~~RPs~~ev~~~l~~~~ 359 (407)
|+.||++|||+.++++|-+...
T Consensus 434 L~~dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 434 MRFKGRQRISAKAALAHPYFDR 455 (566)
T ss_pred ccCCcccCCCHHHHhCCcCcCC
Confidence 9999999999999999988643
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=266.45 Aligned_cols=242 Identities=25% Similarity=0.315 Sum_probs=194.9
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 157 (407)
.+|....+||+|+||.|-+|..+ +.+.+|||+++++.. .++.+--+.|-++|+.. +-|.++.+..++..-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46777889999999999999654 577899999976532 12233445778888777 578899999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
|||+.||+|--++.. -..+.+..+..++.+||.||-+||+++ |+.||||.+|||||.+|.+||+|||+++.---+
T Consensus 429 MEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccccC
Confidence 999999999777743 334788888999999999999999999 999999999999999999999999999854322
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCccc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM 317 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 317 (407)
.. .+.+++|||.|+|||++.-.+|+..+|.|||||+||||+.|++||++....+ +...+.+...
T Consensus 504 ~~-TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e-------lF~aI~ehnv-------- 567 (683)
T KOG0696|consen 504 GV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-------LFQAIMEHNV-------- 567 (683)
T ss_pred Cc-ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-------HHHHHHHccC--------
Confidence 22 2356899999999999999999999999999999999999999998754332 2222222111
Q ss_pred ccCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 040557 318 RKEGIVERDALQVINVAFICLQPHGNQRPP 347 (407)
Q Consensus 318 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs 347 (407)
.++...+.+...+....+.+.|.+|..
T Consensus 568 ---syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 ---SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ---cCcccccHHHHHHHHHHhhcCCccccC
Confidence 244455667888888899999999964
No 384
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=264.28 Aligned_cols=269 Identities=20% Similarity=0.235 Sum_probs=205.3
Q ss_pred HhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-C-C----ceeeeeeeeecCC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-H-K----NLVRLLGCCSDGS 152 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~l~~~~~~~~ 152 (407)
.+++|.+...+|+|.||.|-+.... .+..||||+++. -....+.-+-|+++|.++. + | -++.+.+|+.-.+
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~--V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN--VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHH--HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 3688999999999999999999743 478999999853 2233345567999999983 2 2 3678889999999
Q ss_pred eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-------------
Q 040557 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE------------- 219 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~------------- 219 (407)
+.|+|+|.+ |-|+.+++..++-.+++...+..++.|+++++++||+.+ ++|-||||+|||+.+
T Consensus 165 hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCcc
Confidence 999999998 558999998888888999999999999999999999998 999999999999931
Q ss_pred -------CCceEEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcc
Q 040557 220 -------KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSE 292 (407)
Q Consensus 220 -------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~ 292 (407)
+..++|+|||.|++-.... +..+.|..|.|||++.+-.++.+.||||+||||.||.||...|......+
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 3468999999998765544 45678999999999999999999999999999999999998876543221
Q ss_pred c--------Cchh-HH-----HHHHHHhCccc-----------cccCccc---ccCCCCHHHHHHHHHHHHHccCCCCCC
Q 040557 293 M--------QYLP-EY-----AWKLYERGRIL-----------ELVDPRM---RKEGIVERDALQVINVAFICLQPHGNQ 344 (407)
Q Consensus 293 ~--------~~~~-~~-----~~~~~~~~~~~-----------~~~d~~~---~~~~~~~~~~~~l~~l~~~cl~~~p~~ 344 (407)
. +.++ .. ..+....+++. ...++.. ........+..++.+|+..||..||.+
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 0 0001 00 11122222111 0000000 001122345678999999999999999
Q ss_pred CCCHHHHHHHhhcc
Q 040557 345 RPPMSEIVAMLTCK 358 (407)
Q Consensus 345 RPs~~ev~~~l~~~ 358 (407)
|+|+.|++.|-.+.
T Consensus 397 RiTl~EAL~HpFF~ 410 (415)
T KOG0671|consen 397 RITLREALSHPFFA 410 (415)
T ss_pred cccHHHHhcCHHhh
Confidence 99999999987654
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.7e-34 Score=280.21 Aligned_cols=267 Identities=20% Similarity=0.281 Sum_probs=184.2
Q ss_pred HhcCCCCCCeeeccCCccEEEEEe-----------------cCCcEEEEEEeccccChh-------------hHHHHHHH
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKL-----------------ADGTLVAVKKLCVDKSQQ-------------GESEFLSE 129 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~-------------~~~~~~~e 129 (407)
..++|++.++||+|+||.||+|.. .+++.||||++....... ..+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 357899999999999999999963 235689999986432111 11223457
Q ss_pred HHHHHcCCCCce-----eeeeeeeec--------CCeeEEEEEeccCCChhHHHhccCC---------------------
Q 040557 130 VRMITSIQHKNL-----VRLLGCCSD--------GSQRLLVYEYMKNRSLDLLIYGESD--------------------- 175 (407)
Q Consensus 130 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------- 175 (407)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777753 3467999999999999998864211
Q ss_pred -CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccccCccccCc
Q 040557 176 -KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254 (407)
Q Consensus 176 -~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aP 254 (407)
..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++...............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 23467788899999999999999988 99999999999999999999999999976544332222223458899999
Q ss_pred cccccCC--------------------C--CccccEEehhHHHHHHHhcCC-CCCCCCCc--ccCch--hHHHHHHHHhC
Q 040557 255 EYAIRGE--------------------L--SEKADIYSFGVLVLEIISCRK-NTDLTLPS--EMQYL--PEYAWKLYERG 307 (407)
Q Consensus 255 E~~~~~~--------------------~--~~k~Dv~s~G~vl~el~tg~~-p~~~~~~~--~~~~~--~~~~~~~~~~~ 307 (407)
|.+.... + ..+.||||+||++++|++|.. |+...... +.... ....|..+...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9875432 1 235799999999999999875 44321100 00000 00011111111
Q ss_pred ccccccCcccccCCCCHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHHhhcc
Q 040557 308 RILELVDPRMRKEGIVERDALQVINVAFICLQPHG---NQRPPMSEIVAMLTCK 358 (407)
Q Consensus 308 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p---~~RPs~~ev~~~l~~~ 358 (407)
. .+.. ..........+++.++|..+| .+|+|+.|+++|.|+.
T Consensus 460 ~----~~~~-----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 460 K----YDFS-----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred C----CCcc-----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 1 1111 112234567889999998765 6899999999998864
No 386
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=236.68 Aligned_cols=267 Identities=22% Similarity=0.315 Sum_probs=198.2
Q ss_pred CCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhh-HHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+|...++||+|.||+||+|+.. +++.||+|++..+...+. -...++|+-+|+.++|.|||++++........-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3444578999999999999854 588999999976654332 34678999999999999999999999999999999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
|.. +|..+..... +-++.+....++.|+++|+.++|+++ +.|||+||.|.|++.+|++|++|||+++.+.-.-..
T Consensus 83 cdq-dlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred hhH-HHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 965 7888876544 44899999999999999999999998 999999999999999999999999999987644322
Q ss_pred cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhC------cccccc
Q 040557 241 LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERG------RILELV 313 (407)
Q Consensus 241 ~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 313 (407)
.+..+.|..|.+|.++.+ +-|++..|+||-||++.|+.....|......-.. .+... ...+..- .+..+-
T Consensus 158 -ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd-qlkri-f~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 158 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRI-FRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred -eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH-HHHHH-HHHhCCCccccCCccccCC
Confidence 133467899999999887 4689999999999999999986666543322111 11111 1111100 111122
Q ss_pred CcccccC--------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 314 DPRMRKE--------GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 314 d~~~~~~--------~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
|...-.. ...+.....-.+++...+.-+|.+|.++++.+++..+
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf 286 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYF 286 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccc
Confidence 2111110 0111112234678888999999999999999988643
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2e-34 Score=258.23 Aligned_cols=241 Identities=27% Similarity=0.356 Sum_probs=193.9
Q ss_pred CCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChhHHHhc
Q 040557 94 GFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYG 172 (407)
Q Consensus 94 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 172 (407)
+||.||+|... +|+.+|+|++...........+.+|++.+++++|+|++++++++......++++||+.+++|..++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999876 48999999986544333267899999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccccCcccc
Q 040557 173 ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252 (407)
Q Consensus 173 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~ 252 (407)
.. .+++..+..++.+++.++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......++..|+
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~ 153 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYM 153 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCC
Confidence 33 2899999999999999999999998 9999999999999999999999999998776543 223456888999
Q ss_pred CccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHH
Q 040557 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVIN 332 (407)
Q Consensus 253 aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~ 332 (407)
+||...+..++.++||||||+++++|++|..|+...... .........+... ........+..+.+
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 219 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL------LELFKKIGKPKPP--------FPPPEWKISPEAKD 219 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH------HHHHHHHhccCCC--------CccccccCCHHHHH
Confidence 999998888999999999999999999999988642111 1111111111110 00000003456889
Q ss_pred HHHHccCCCCCCCCCHHHHHHHh
Q 040557 333 VAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 333 l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
++.+||..+|++||++.+++++-
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~~~ 242 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQHP 242 (244)
T ss_pred HHHHHccCCchhccCHHHHhhCC
Confidence 99999999999999999999853
No 388
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.9e-37 Score=257.69 Aligned_cols=272 Identities=22% Similarity=0.359 Sum_probs=197.2
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhh-HHHHHHHHHHHHcCCCCceeeeeeeeec--------CCe
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGCCSD--------GSQ 153 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~~~ 153 (407)
|.-..+||+|.||.||+|+.. +|+.||+|++..+....+ -....+|+.+|..++|+|++.++..|.. ...
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 344567999999999999854 578899988755433322 2345799999999999999999998843 335
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
+|+||.+|+. +|.-++.+. ...++..++.+++.++..||.|+|+.. |+|||+|+.|+|++.++.+||+|||+++.
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccccc
Confidence 7999999987 777777433 245899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCcc---cccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccC--------chhHHHH
Q 040557 234 FPEDQAY---LSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQ--------YLPEYAW 301 (407)
Q Consensus 234 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--------~~~~~~~ 301 (407)
+...... ..++.+.|..|.+||.+.+ ..|+.+.|||.-||++.||+||.+-+........- .....+|
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 6533222 2245677999999998886 57999999999999999999999877544321100 0000111
Q ss_pred HHHHhCccccccCcc-cccC--------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcccc
Q 040557 302 KLYERGRILELVDPR-MRKE--------GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVE 360 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~-~~~~--------~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~~ 360 (407)
..+..-.+.+.+... +... ..+..-..+.++++..++..||.+|+.+++++.|-++..+
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 111111111111000 0000 0001112367889999999999999999999999887654
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=280.32 Aligned_cols=246 Identities=25% Similarity=0.374 Sum_probs=188.5
Q ss_pred CCCCCeeeccCCcc-EEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEEEec
Q 040557 84 FHPGNLLGRGGFGP-VYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 84 ~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
|...+++|.|+.|+ ||+|.. +|+.||||++... ......+|+..|+.- +|||||++++.-.+....|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 34445789999986 699999 5899999998532 233456899999988 6999999999988999999999999
Q ss_pred cCCChhHHHhcc--CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC---C--CceEEecccCcccc
Q 040557 162 KNRSLDLLIYGE--SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE---K--FQSKIGDFGLARFF 234 (407)
Q Consensus 162 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~---~--~~~kl~Dfgla~~~ 234 (407)
.. +|.+++... ......-...+.+..|++.|+++||+.+ |+||||||.||||+. + ..++|+|||+++.+
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 65 999999763 1111222345678899999999999988 999999999999975 2 57899999999988
Q ss_pred CCCCccc--ccccccCccccCccccccCCCCccccEEehhHHHHHHHhc-CCCCCCCCCcccCchhHHHHHHHHhCcccc
Q 040557 235 PEDQAYL--STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISC-RKNTDLTLPSEMQYLPEYAWKLYERGRILE 311 (407)
Q Consensus 235 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (407)
..+.... ..+..||-+|+|||++....-+.++||||+||++|+.++| .+||......+. ..+..+....
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--------NIl~~~~~L~ 733 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--------NILTGNYTLV 733 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--------hhhcCcccee
Confidence 7655433 3456799999999999998888899999999999999998 788864322111 1111111010
Q ss_pred ccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 312 ~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
. +. ...++ ...+||.+|+.++|..||++.+|+.|.
T Consensus 734 ~----L~---~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 734 H----LE---PLPDC--EAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred e----ec---cCchH--HHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 0 11 11111 678999999999999999999999874
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=246.09 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=198.7
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEecccc--ChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 157 (407)
++|.+..+||+|+|..|..+++. +.+.+|+|+++++- ..++..-+..|-.+..+. +||.+|.+..+|.....+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 57899999999999999999864 67889999987643 222333445566666665 799999999999999999999
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED 237 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 237 (407)
.||++||+|-.++. ....++++.+..+...|+.||.|||+.| |+.||||.+|+|+|..|.+||+|+|+++.--..
T Consensus 330 ieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 99999999977774 4455999999999999999999999999 999999999999999999999999999854333
Q ss_pred CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCC-CcccCchhHHHHHHHHhCccccccCcc
Q 040557 238 QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTL-PSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
.. .+++++|||.|+|||++.+..|...+|.|++||+++||+.|+.||+.-- .....+..++..+.+-+.++.
T Consensus 405 gd-~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir------ 477 (593)
T KOG0695|consen 405 GD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR------ 477 (593)
T ss_pred Cc-ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc------
Confidence 22 3457899999999999999999999999999999999999999997532 222233345555554443322
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPP 347 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs 347 (407)
.+...+.....++..-|++||.+|..
T Consensus 478 -----iprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 478 -----IPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred -----ccceeehhhHHHHHHhhcCCcHHhcC
Confidence 22223344567788899999999853
No 391
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-32 Score=252.36 Aligned_cols=269 Identities=24% Similarity=0.290 Sum_probs=205.1
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-----C---Cceeeeeeeee---
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-----H---KNLVRLLGCCS--- 149 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~--- 149 (407)
.+|.+.++||.|.|++||++.+ .+.+.||+|+.+ ..+...+..+.|+++|.+++ | .+||+|+++|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvK--SAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVK--SAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEe--hhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 5788899999999999999974 467889999984 33444566789999999883 2 47999999985
Q ss_pred -cCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC--------
Q 040557 150 -DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK-------- 220 (407)
Q Consensus 150 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~-------- 220 (407)
.+.+.|+|+|++ |-+|..++.....+.++...+.+|+.|++.||.|||..+ +|||.||||+|||+..+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~ 232 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDA 232 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhh
Confidence 456899999999 668888887777788999999999999999999999986 79999999999998000
Q ss_pred --------------------------------------------------------------------------------
Q 040557 221 -------------------------------------------------------------------------------- 220 (407)
Q Consensus 221 -------------------------------------------------------------------------------- 220 (407)
T Consensus 233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~ 312 (590)
T KOG1290|consen 233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN 312 (590)
T ss_pred hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence
Q ss_pred ------------------------------------------------------------------------------Cc
Q 040557 221 ------------------------------------------------------------------------------FQ 222 (407)
Q Consensus 221 ------------------------------------------------------------------------------~~ 222 (407)
-.
T Consensus 313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~ 392 (590)
T KOG1290|consen 313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR 392 (590)
T ss_pred ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence 02
Q ss_pred eEEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHH--
Q 040557 223 SKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA-- 300 (407)
Q Consensus 223 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-- 300 (407)
+||+|||-|+.+.... +.-.-|..|.|||++.+..|++.+||||++|+++||+||...|+.........-.+-+
T Consensus 393 vKIaDlGNACW~~khF----T~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~ 468 (590)
T KOG1290|consen 393 VKIADLGNACWVHKHF----TEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL 468 (590)
T ss_pred EEEeeccchhhhhhhh----chhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence 4555666555443222 1234578999999999999999999999999999999999999876654432111111
Q ss_pred ---------HHHHHhCccc-cccC------------------cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 040557 301 ---------WKLYERGRIL-ELVD------------------PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352 (407)
Q Consensus 301 ---------~~~~~~~~~~-~~~d------------------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~ 352 (407)
+.+...|+-. +.++ -.......+.+.+.++.+++.-||+.+|++|||+.+.+
T Consensus 469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl 548 (590)
T KOG1290|consen 469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL 548 (590)
T ss_pred HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence 1222222111 1111 11223457778889999999999999999999999999
Q ss_pred HHhhccc
Q 040557 353 AMLTCKV 359 (407)
Q Consensus 353 ~~l~~~~ 359 (407)
+|.|...
T Consensus 549 ~hPwLn~ 555 (590)
T KOG1290|consen 549 KHPWLNP 555 (590)
T ss_pred cCccccC
Confidence 9999653
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=231.00 Aligned_cols=206 Identities=26% Similarity=0.380 Sum_probs=172.2
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCee
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 154 (407)
++...+.......||+|++|.|-+.++ .+|...|+|++...-..+...+.++|+.+..+. .+|.+|.++|.+.+....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 344445555567899999999998875 579999999998776777778889999887766 799999999999999999
Q ss_pred EEEEEeccCCChhHHHhc--cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 155 LLVYEYMKNRSLDLLIYG--ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
++.||.|.. ||+.+-.. ..+..+++...-+|+..+..||.|||++- .++|||+||+|||++.+|++|+||||.+-
T Consensus 121 wIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccce
Confidence 999999965 77655431 34567899999999999999999999964 59999999999999999999999999998
Q ss_pred ccCCCCcccccccccCccccCcccccc----CCCCccccEEehhHHHHHHHhcCCCCCC
Q 040557 233 FFPEDQAYLSTNFAGTLGYTAPEYAIR----GELSEKADIYSFGVLVLEIISCRKNTDL 287 (407)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~k~Dv~s~G~vl~el~tg~~p~~~ 287 (407)
.+.+.-.. +-..|-..|||||.+.. +.|+-||||||||+.+.||.+++.|++.
T Consensus 198 ~L~dSiAk--t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 198 YLVDSIAK--TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred eehhhhHH--HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 77654432 22457789999998753 4789999999999999999999999864
No 393
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-33 Score=261.75 Aligned_cols=209 Identities=24% Similarity=0.350 Sum_probs=177.5
Q ss_pred cCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEecccc--ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.-|...+.||-|+||.|.+++ ..+...||.|.+.+.. .......++.|-.||+..+.+-||+|+..|.+.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 346667889999999999996 4457789999986543 2344556788999999999999999999999999999999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC--
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-- 236 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~-- 236 (407)
+|++||++-.+|- +-+.+.+..+..++.++.+|+++.|..| +|||||||+|||||.+|.+||+||||+.-+..
T Consensus 709 dYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred eccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecc
Confidence 9999999988774 3346888999999999999999999998 99999999999999999999999999975420
Q ss_pred -CCc--------------------------------------ccccccccCccccCccccccCCCCccccEEehhHHHHH
Q 040557 237 -DQA--------------------------------------YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLE 277 (407)
Q Consensus 237 -~~~--------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~e 277 (407)
..+ ......+||+.|+|||++....|+.-.|.||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 000 01113579999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCcccCc
Q 040557 278 IISCRKNTDLTLPSEMQY 295 (407)
Q Consensus 278 l~tg~~p~~~~~~~~~~~ 295 (407)
|+.|+.||....+.+.++
T Consensus 864 m~~g~~pf~~~tp~~tq~ 881 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQY 881 (1034)
T ss_pred HhhCCCCccCCCCCccee
Confidence 999999999888877654
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=246.29 Aligned_cols=268 Identities=25% Similarity=0.337 Sum_probs=196.4
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccc-cChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCC-----eeEE
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGS-----QRLL 156 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 156 (407)
.+..+.||-|+||.||.+.++ +|+.||.|++..- ......+++.+|+.+|+..+|.|++..+++..-.. +.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344578999999999999864 7999999987432 12334578899999999999999999988764332 4578
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
++|.|.. +|..++ -+.+.++-+.+.-+.+||++||.|||+.+ |.||||||.|.|+++|..+||+|||+++.-..
T Consensus 135 ~TELmQS-DLHKII--VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQS-DLHKII--VSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHh-hhhhee--ccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 8888854 777776 34566888888889999999999999998 99999999999999999999999999998877
Q ss_pred CCcccccccccCccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHH--------HHHHHHhC
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEY--------AWKLYERG 307 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~--------~~~~~~~~ 307 (407)
+.....+..+-|..|.|||.+++. .|+...||||.||++.||+..+..|....+-+.-.+... .-+..-+|
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 766666667788999999999874 789999999999999999988877754433211110000 00000011
Q ss_pred ccccccCcccccC--------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 308 RILELVDPRMRKE--------GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 308 ~~~~~~d~~~~~~--------~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
....++....+.. ........+...+.+.++..||+.|.+..+.+.++..
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 1111111111110 0111122345677888999999999999999988753
No 395
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98 E-value=4.4e-31 Score=231.01 Aligned_cols=212 Identities=36% Similarity=0.593 Sum_probs=184.3
Q ss_pred eeccCCccEEEEEecC-CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChhH
Q 040557 90 LGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDL 168 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 168 (407)
||+|++|.||++...+ |+.+++|.+...........+.+|++.++.+.|++++++++++......++++||+.+++|..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998754 899999998654433245678999999999999999999999999899999999999999999
Q ss_pred HHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-CCceEEecccCccccCCCCccccccccc
Q 040557 169 LIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-KFQSKIGDFGLARFFPEDQAYLSTNFAG 247 (407)
Q Consensus 169 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~g 247 (407)
++.... ..+++..+..++.+++.++.+||+.+ ++|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~ 155 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVG 155 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccC
Confidence 986442 35899999999999999999999998 999999999999999 89999999999987655432 1223557
Q ss_pred CccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHH
Q 040557 248 TLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326 (407)
Q Consensus 248 t~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 326 (407)
...|++||..... .++.++|+|++|+++++|
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8899999988877 888999999999999999
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 327 ALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 327 ~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
..+.+++..|++.+|++||++.++++++
T Consensus 188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3477899999999999999999998764
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.2e-32 Score=229.32 Aligned_cols=271 Identities=21% Similarity=0.337 Sum_probs=204.4
Q ss_pred cccCHHHHHH---HhcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeee
Q 040557 70 SYFDFQTLKK---ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRL 144 (407)
Q Consensus 70 ~~~~~~~~~~---~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l 144 (407)
.+++++.... ..++|++.+++|+|.++.||.|. ..+++.++||.++.. ..+.+.+|+.+|..+. ||||+++
T Consensus 23 eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L 98 (338)
T KOG0668|consen 23 EYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV----KKKKIKREIKILQNLRGGPNIIKL 98 (338)
T ss_pred hhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH----HHHHHHHHHHHHHhccCCCCeeeh
Confidence 4566665332 34678888999999999999997 457889999998533 3356789999999996 9999999
Q ss_pred eeeeecCC--eeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-CC
Q 040557 145 LGCCSDGS--QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-KF 221 (407)
Q Consensus 145 ~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-~~ 221 (407)
++...++. .+.|++||+.+.+...+- +.++...+...+.+++.||.|||+.| |.|||+||.|+++|. .-
T Consensus 99 ~DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~r 170 (338)
T KOG0668|consen 99 LDIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELR 170 (338)
T ss_pred hhhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhc
Confidence 99987754 567999999998876664 34777788889999999999999999 999999999999994 55
Q ss_pred ceEEecccCccccCCCCcccccccccCccccCcccccc-CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHH
Q 040557 222 QSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR-GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300 (407)
Q Consensus 222 ~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~ 300 (407)
.++|+|+|||.++.....+ ...+.+..|.-||.+.. ..|+..-|+|||||+|..|+..+.||........+ +...+
T Consensus 171 kLrlIDWGLAEFYHp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ-LVkIa 247 (338)
T KOG0668|consen 171 KLRLIDWGLAEFYHPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ-LVKIA 247 (338)
T ss_pred eeeeeecchHhhcCCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHH-HHHHH
Confidence 7999999999998876654 23456777889998876 45788899999999999999999999755443222 11111
Q ss_pred --------HHHHHhCccccccCccccc---------------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 301 --------WKLYERGRILELVDPRMRK---------------EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 301 --------~~~~~~~~~~~~~d~~~~~---------------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
...+..-.+ .+|+.... .+...-...++++++...|..|-.+|||++|...|..+
T Consensus 248 kVLGt~el~~Yl~KY~i--~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF 325 (338)
T KOG0668|consen 248 KVLGTDELYAYLNKYQI--DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYF 325 (338)
T ss_pred HHhChHHHHHHHHHHcc--CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchH
Confidence 111111111 12222211 01111123678899999999999999999999998654
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=232.67 Aligned_cols=266 Identities=25% Similarity=0.257 Sum_probs=196.9
Q ss_pred cCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecC------Ce
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDG------SQ 153 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 153 (407)
.+|.....+|.|+- .|..+.+ -.++.||+|+..... ......+..+|..++..++|+|+++++.++.-. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 56666778888887 5555543 358899999874332 234456778999999999999999999998543 35
Q ss_pred eEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 154 RLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 154 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.|+|||+|.. +|...+.. .++-.++..++.|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|+.
T Consensus 96 ~y~v~e~m~~-nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcc
Confidence 6999999964 88887752 3678888999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCc----------------ccCchh
Q 040557 234 FPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS----------------EMQYLP 297 (407)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~----------------~~~~~~ 297 (407)
-..+ ...+..+.|..|.|||++.+..|.+.+||||.||++.||++|+--|.+...- -.+.+.
T Consensus 168 e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~ 245 (369)
T KOG0665|consen 168 EDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ 245 (369)
T ss_pred cCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence 5544 4567788999999999999988999999999999999999999776532210 000011
Q ss_pred HHHHHHHHh------CccccccCc-ccccC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 298 EYAWKLYER------GRILELVDP-RMRKE-GIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 298 ~~~~~~~~~------~~~~~~~d~-~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..+...... -...+.+.. ..... ......+..+.+++.+||-.||++|-+++++++|.-..
T Consensus 246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 111111110 011111111 11110 11123455678999999999999999999999997654
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=5.3e-30 Score=227.10 Aligned_cols=200 Identities=36% Similarity=0.513 Sum_probs=172.4
Q ss_pred CCCCCeeeccCCccEEEEEecC-CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEecc
Q 040557 84 FHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
|+..+.||.|++|.||++...+ ++.+|+|.+...........+.+|++.+..++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999998764 899999998654433256788899999999999999999999999899999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
+++|.+++...... +++.....++.+++.++.+||+.+ ++|+|+++.||+++.++.++|+|||++...........
T Consensus 81 ~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 99999998644322 789999999999999999999987 99999999999999999999999999987765431122
Q ss_pred cccccCccccCcccc-ccCCCCccccEEehhHHHHHHHhcCCCCCC
Q 040557 243 TNFAGTLGYTAPEYA-IRGELSEKADIYSFGVLVLEIISCRKNTDL 287 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~-~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~ 287 (407)
....++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 345678899999988 667788899999999999999999999954
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=3e-31 Score=244.27 Aligned_cols=275 Identities=19% Similarity=0.228 Sum_probs=204.9
Q ss_pred cCHHHHHHHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCC------CCceeee
Q 040557 72 FDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ------HKNLVRL 144 (407)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l 144 (407)
|.+.--+..-.+|.+....|+|-|++|..|... .|..||||++.. .....+.=+.|+++|.+|+ .-|++++
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn--NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN--NEVMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeec--chHHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 444444555678888888999999999999854 478999999953 3333445578999999995 3588999
Q ss_pred eeeeecCCeeEEEEEeccCCChhHHHhcc-CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC-Cc
Q 040557 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGE-SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK-FQ 222 (407)
Q Consensus 145 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~-~~ 222 (407)
+..|...+++|||+|-+. .+|.+.+..- .+-.|....+..++.|+..||..|..-+ |+|.||||.|||++++ ..
T Consensus 500 ~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNI 575 (752)
T ss_pred HHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcce
Confidence 999999999999999874 5888888643 3456888999999999999999999877 9999999999999965 45
Q ss_pred eEEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchh-----
Q 040557 223 SKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP----- 297 (407)
Q Consensus 223 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~----- 297 (407)
+||||||.|.....+.. +.+..+..|.|||++.+..|+...|+||.||+||||.||+..|.+.....+--+.
T Consensus 576 LKLCDfGSA~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred eeeccCccccccccccc---cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 79999999987765543 2344566899999999999999999999999999999999887654332111000
Q ss_pred HHHHHHHHhCccc---------------------------cccCc------cc-ccCCCC---HHHHHHHHHHHHHccCC
Q 040557 298 EYAWKLYERGRIL---------------------------ELVDP------RM-RKEGIV---ERDALQVINVAFICLQP 340 (407)
Q Consensus 298 ~~~~~~~~~~~~~---------------------------~~~d~------~~-~~~~~~---~~~~~~l~~l~~~cl~~ 340 (407)
.+..+++..+.+. ..+.| .+ ....++ .....++.+|+..||..
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 0111222222111 00111 00 001122 23356788999999999
Q ss_pred CCCCCCCHHHHHHHh
Q 040557 341 HGNQRPPMSEIVAML 355 (407)
Q Consensus 341 ~p~~RPs~~ev~~~l 355 (407)
||++|.|..+.++|.
T Consensus 733 dP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 733 DPEKRITVNQALKHP 747 (752)
T ss_pred ChhhcCCHHHHhcCC
Confidence 999999999999885
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=251.77 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=202.5
Q ss_pred hcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYE 159 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 159 (407)
.++|...+.+|+|.||.||++++ ..++..|+|.++... .....-..+|+-+++.++|+||+.++|.+...+..++.||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep-~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP-GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccC-CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 46788889999999999999985 468999999997554 3344556789999999999999999999999999999999
Q ss_pred eccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCc
Q 040557 160 YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA 239 (407)
Q Consensus 160 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 239 (407)
||.+|+|.+.-+ ...++++.++..++...++|++|||+.+ -+|||||-.||++++.|.+|++|||.+..+...-.
T Consensus 93 ycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati~ 167 (829)
T KOG0576|consen 93 YCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATIA 167 (829)
T ss_pred ecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhhh
Confidence 999999998874 4567899999999999999999999998 89999999999999999999999999976654332
Q ss_pred ccccccccCccccCccccc---cCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcc
Q 040557 240 YLSTNFAGTLGYTAPEYAI---RGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPR 316 (407)
Q Consensus 240 ~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 316 (407)
....+.||+.|||||+.. .+.|..++|||++|+...|+---++|.....+. .+..++.. ...++.
T Consensus 168 -KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm-------r~l~LmTk----S~~qpp 235 (829)
T KOG0576|consen 168 -KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM-------RALFLMTK----SGFQPP 235 (829)
T ss_pred -hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH-------HHHHHhhc----cCCCCC
Confidence 234578999999999763 567999999999999999998777665433222 11111211 112222
Q ss_pred cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 317 MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 317 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
-.+ ........+-++++.|+.++|.+||+++.++.|
T Consensus 236 ~lk--Dk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 236 TLK--DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccc--CCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 222 123345668899999999999999999988764
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=241.52 Aligned_cols=197 Identities=25% Similarity=0.360 Sum_probs=166.2
Q ss_pred cCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccCh-------hhHHHHHHHHHHHHcCC---CCceeeeeeeeec
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQ-------QGESEFLSEVRMITSIQ---HKNLVRLLGCCSD 150 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 150 (407)
..|+..+.+|.|+||.|+.+.++ +...|+||.+.++.-- ...-.+-.|+.+|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45888999999999999999865 5678999998654311 11123457999999997 9999999999999
Q ss_pred CCeeEEEEEecc-CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEeccc
Q 040557 151 GSQRLLVYEYMK-NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 151 ~~~~~lv~e~~~-~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
++.+||+||-.. +-+|.+++. ....+++..+.-|+.|++.|+++||+.+ |+|||||-+||.++.+|-+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeecc
Confidence 999999999874 457777774 4456899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCCcccccccccCccccCccccccCCC-CccccEEehhHHHHHHHhcCCCCC
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL-SEKADIYSFGVLVLEIISCRKNTD 286 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~s~G~vl~el~tg~~p~~ 286 (407)
.+.+...... ..++||..|.|||++.+..| ...-|||++|++||.++....|+.
T Consensus 716 saa~~ksgpf---d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKSGPF---DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcCCCc---ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9986654432 35789999999999999887 566799999999999988776654
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=1.1e-29 Score=229.37 Aligned_cols=270 Identities=25% Similarity=0.349 Sum_probs=200.4
Q ss_pred HHHHHhcCCCCCCeeeccCCccEEEEEec----CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeec
Q 040557 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSD 150 (407)
Q Consensus 76 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 150 (407)
.+....+.|...++||.|.|++||++.+. ..+.||+|.+...... .++.+|+++|..+ .+.||+++.+++..
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 34455678889999999999999999643 4678999998654433 3578999999999 69999999999999
Q ss_pred CCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc-CCCceEEeccc
Q 040557 151 GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFG 229 (407)
Q Consensus 151 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfg 229 (407)
++...+|+||++.....++.. .++...+..++..++.||.++|.+| |+||||||+|+|.+ ..+.-.|+|||
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred CCeeEEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEech
Confidence 999999999999988888873 2678888999999999999999999 99999999999998 45678999999
Q ss_pred CccccCCC-------------------------------------------CcccccccccCccccCcccccc-CCCCcc
Q 040557 230 LARFFPED-------------------------------------------QAYLSTNFAGTLGYTAPEYAIR-GELSEK 265 (407)
Q Consensus 230 la~~~~~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~k 265 (407)
+|...... ......+..||++|.|||++.. ...+++
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 99721100 0001123569999999998876 456899
Q ss_pred ccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHH--------H-HHHhCc--ccc---------------ccC-cc--
Q 040557 266 ADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW--------K-LYERGR--ILE---------------LVD-PR-- 316 (407)
Q Consensus 266 ~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~--------~-~~~~~~--~~~---------------~~d-~~-- 316 (407)
+||||.||+++.+++++.||.....+. ..+.+.+. + ....|+ +.+ -++ ..
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~-~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDA-DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred cceeeccceeehhhccccccccCcccc-chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 999999999999999999996433221 11111110 0 000111 111 000 00
Q ss_pred ------cccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 317 ------MRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 317 ------~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
.......+..+..+++++.+|+..||.+|-|+++.++|.-+
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF 384 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFF 384 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCC
Confidence 11111122233468899999999999999999999998654
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-29 Score=212.12 Aligned_cols=254 Identities=18% Similarity=0.311 Sum_probs=187.0
Q ss_pred hcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeee-eeecCCeeEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLG-CCSDGSQRLLV 157 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~-~~~~~~~~~lv 157 (407)
.+.|.+.+.||+|.||.+-++.+. ....+++|-+. .......+|.+|..-=-.| .|.||+.-++ .|...+.++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp--~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVP--RPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccC--cchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 367888899999999999999865 57788999874 3445567889988654444 5899988765 46677788899
Q ss_pred EEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc--CCCceEEecccCccccC
Q 040557 158 YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD--EKFQSKIGDFGLARFFP 235 (407)
Q Consensus 158 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~--~~~~~kl~Dfgla~~~~ 235 (407)
+||++.|+|...+. ...+.+....+++.|++.|+.|+|+++ +||||||.+|||+- +..++||+|||+.+..+
T Consensus 101 qE~aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eccCccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccC
Confidence 99999999988873 345888888999999999999999999 99999999999994 44589999999998654
Q ss_pred CCCcccccccccCccccCccccccC-----CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccc
Q 040557 236 EDQAYLSTNFAGTLGYTAPEYAIRG-----ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRIL 310 (407)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (407)
..-.. ..-+..|.+||..... ...+.+|||.||++++.++||+.||......+. +.|-+..+..+...
T Consensus 175 ~tV~~----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~---~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 175 TTVKY----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK---PYWEWEQWLKRKNP 247 (378)
T ss_pred ceehh----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc---hHHHHHHHhcccCc
Confidence 33221 2345679999976543 236789999999999999999999974333332 33444445544333
Q ss_pred cccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHhh
Q 040557 311 ELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP---MSEIVAMLT 356 (407)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~ev~~~l~ 356 (407)
.+. ...+ .....+..+..+-+..+|++|-. .+.....+|
T Consensus 248 ~~P-~~F~------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 248 ALP-KKFN------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred cCc-hhhc------ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 111 1111 12345677888899999999944 444444444
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=8.4e-29 Score=257.97 Aligned_cols=198 Identities=18% Similarity=0.209 Sum_probs=140.8
Q ss_pred CC-Cceeeeeeee-------ecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeee
Q 040557 137 QH-KNLVRLLGCC-------SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208 (407)
Q Consensus 137 ~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~ 208 (407)
+| .||.+++++| .....++.++||+ +++|.+++... ...+++..+..++.||+.||.|||+++ |+||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---IvHr 104 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG---IVVH 104 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC---eeec
Confidence 44 5777777776 2234567788987 56999999643 345899999999999999999999998 9999
Q ss_pred ccccccEEEcC-------------------CCceEEecccCccccCCCC---------------cccccccccCccccCc
Q 040557 209 DIKASNVLLDE-------------------KFQSKIGDFGLARFFPEDQ---------------AYLSTNFAGTLGYTAP 254 (407)
Q Consensus 209 dlk~~Nill~~-------------------~~~~kl~Dfgla~~~~~~~---------------~~~~~~~~gt~~y~aP 254 (407)
||||+||||+. ++.+|++|||+++...... ........||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 4456666777665421100 0001124578899999
Q ss_pred cccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHH
Q 040557 255 EYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVA 334 (407)
Q Consensus 255 E~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~ 334 (407)
|++.+..++.++|||||||+||||++|..|+.... ..... .... .+.+.. ........+++
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~-~~~~----~~~~~~------~~~~~~~~~~~ 245 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSS-LRHR----VLPPQI------LLNWPKEASFC 245 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHH-HHHh----hcChhh------hhcCHHHHHHH
Confidence 99999999999999999999999999887653210 00111 1100 111111 01123456888
Q ss_pred HHccCCCCCCCCCHHHHHHHhhcc
Q 040557 335 FICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 335 ~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
.+||+.+|.+||++.|+++|.+..
T Consensus 246 ~~~L~~~P~~Rps~~eil~h~~~~ 269 (793)
T PLN00181 246 LWLLHPEPSCRPSMSELLQSEFIN 269 (793)
T ss_pred HHhCCCChhhCcChHHHhhchhhh
Confidence 899999999999999999987753
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=1.5e-27 Score=203.72 Aligned_cols=167 Identities=23% Similarity=0.209 Sum_probs=126.6
Q ss_pred CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc
Q 040557 164 RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243 (407)
Q Consensus 164 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 243 (407)
|+|.+++... ...+++..+..++.|++.||.|||+.+ ||+|||++.++.+++ ||++.......
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc-----
Confidence 6888988643 345999999999999999999999875 999999999999999 99998765432
Q ss_pred ccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 244 ~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
..||+.|||||++.+..++.++|||||||++|||+||+.|+...... ............ . .++... ...
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~-----~~~~~~~~~~~~-~--~~~~~~--~~~ 132 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL-----SAILEILLNGMP-A--DDPRDR--SNL 132 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-----cHHHHHHHHHhc-c--CCcccc--ccH
Confidence 25889999999999999999999999999999999999998643221 111111111100 0 001000 011
Q ss_pred HHHHH--HHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 324 ERDAL--QVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~--~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
..... .+.+++.+||+.+|++||++.+++++++..
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 22222 589999999999999999999999998754
No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=4e-26 Score=212.89 Aligned_cols=169 Identities=22% Similarity=0.258 Sum_probs=131.1
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEec--CCcEEEEEEecccc----ChhhHHHHHHHHHHHHcCCCCceeeeeeeeec
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKLA--DGTLVAVKKLCVDK----SQQGESEFLSEVRMITSIQHKNLVRLLGCCSD 150 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 150 (407)
.....++|.+.+.||+|+||.||+|.+. ++..||||++.... .......|.+|+++|.+++|+|++..+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3445678999999999999999999764 57788999875321 223356789999999999999998533222
Q ss_pred CCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeecc-ccccEEEcCCCceEEeccc
Q 040557 151 GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDI-KASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 151 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dl-k~~Nill~~~~~~kl~Dfg 229 (407)
+..++||||++|++|.... .. . ...++.+++.||.|||+.+ |+|||| ||+|||++.++.++|+|||
T Consensus 91 -~~~~LVmE~~~G~~L~~~~---~~---~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLAR---PH---G---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred -CCcEEEEEccCCCCHHHhC---cc---c---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECc
Confidence 4579999999999996321 11 1 1467889999999999998 999999 9999999999999999999
Q ss_pred CccccCCCCcccc-------cccccCccccCccccccC
Q 040557 230 LARFFPEDQAYLS-------TNFAGTLGYTAPEYAIRG 260 (407)
Q Consensus 230 la~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~ 260 (407)
+++.+........ .+..+++.|+|||.+...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9997754332111 356788899999988643
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=3.5e-25 Score=206.95 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=192.3
Q ss_pred CCCCCCeeeccCCccEEEEEecCC--cEEEEEEeccccChhhHHHHHHHHHHHHcCC----CCceeeeeeee-ecCCeeE
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLADG--TLVAVKKLCVDKSQQGESEFLSEVRMITSIQ----HKNLVRLLGCC-SDGSQRL 155 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~----h~niv~l~~~~-~~~~~~~ 155 (407)
+|.+.+.||+|+||.||.+..... ..+|+|........... .+..|..++..+. ..++..+++.. ......+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 799999999999999999986543 47888877544333222 5678888888886 26888888888 4777889
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC-----CceEEecccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK-----FQSKIGDFGL 230 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~-----~~~kl~Dfgl 230 (407)
+||+.+ |.+|.++......+.++..+...++.|++.+|++||+.| ++||||||.|+++... ..+.|.|||+
T Consensus 98 iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 999988 779999886555677999999999999999999999999 9999999999999855 4699999999
Q ss_pred cc--ccCCCCc-----cc--ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHH
Q 040557 231 AR--FFPEDQA-----YL--STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW 301 (407)
Q Consensus 231 a~--~~~~~~~-----~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~ 301 (407)
++ .+..... .. .....||..|.++..+.+...+.+.|+||++.++.|++.|..||........ .
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-------~ 246 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-------K 246 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-------H
Confidence 98 3322211 11 1245699999999999999999999999999999999999999854332211 0
Q ss_pred HHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 302 KLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 302 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
..+........... .....+..+.++...+-..+..++|....+...+....
T Consensus 247 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 247 SKFEKDPRKLLTDR------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred HHHHHHhhhhcccc------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 00111111111111 01112334556666666689999999999998876543
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=2e-25 Score=187.80 Aligned_cols=257 Identities=18% Similarity=0.230 Sum_probs=194.2
Q ss_pred hcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 158 (407)
..+|.+.+.||+|+||.+|.|. ..+|..||||.-.. .....++.-|..+...++ ...|..+..+..+...-.+||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~---~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS---KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecc---cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 3678889999999999999996 67899999997532 223335667888888886 467777777888888889999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC---CCceEEecccCccccC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE---KFQSKIGDFGLARFFP 235 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfgla~~~~ 235 (407)
+.. |.+|+++..-.. ..++..+.+-++-|++.-++|+|..+ ++||||||+|+|..- ...+.++|||+|+.+.
T Consensus 91 dLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence 998 779998875443 34899999999999999999999999 999999999999963 3478999999998775
Q ss_pred CCCcc------cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCcc
Q 040557 236 EDQAY------LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI 309 (407)
Q Consensus 236 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (407)
+.... ...+..||.+|.+-....+...+.+.|+-|+|.+|.++.-|..||.+-.+..... ..+.+.+.++
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q----KyEkI~EkK~ 241 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ----KYEKISEKKM 241 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH----HHHHHHHhhc
Confidence 43322 2245679999999988888889999999999999999999999997655443221 1222222222
Q ss_pred ccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 310 LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
.-.+.... ...+.++.-.+.-|-+..-++-|...-+.+.+
T Consensus 242 s~~ie~LC------~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF 281 (341)
T KOG1163|consen 242 STPIEVLC------KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF 281 (341)
T ss_pred CCCHHHHh------CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence 21111111 11234566677778888888888877666554
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-26 Score=195.71 Aligned_cols=247 Identities=22% Similarity=0.331 Sum_probs=190.0
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
.+|.....|..|+|+++ |..+++|++.... ...-..+|..|.-.|+...||||+.++|.|....++.++..||+-|+|
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 46888899999999996 5556678775443 223335788899999999999999999999999999999999999999
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 246 (407)
...++....-..+..++.+++.++++|++|||+.. +-|.---|.+..+++|++.+++|+-- -++ .+.......
T Consensus 275 ynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarisma-d~k-----fsfqe~gr~ 347 (448)
T KOG0195|consen 275 YNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMA-DTK-----FSFQEVGRA 347 (448)
T ss_pred HHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecc-cce-----eeeeccccc
Confidence 99999888777888999999999999999999986 22334468999999999998887421 111 111222334
Q ss_pred cCccccCccccccCCCC---ccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCC
Q 040557 247 GTLGYTAPEYAIRGELS---EKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIV 323 (407)
Q Consensus 247 gt~~y~aPE~~~~~~~~---~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 323 (407)
-.+.||+||.+..++-+ ..+|+|||++++|||.|...||..-.+.+..... .-+| ++ ...+
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki------aleg---------lr-v~ip 411 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI------ALEG---------LR-VHIP 411 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh------hhcc---------cc-ccCC
Confidence 57889999999887643 5789999999999999999999876665443211 0001 11 1234
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 324 ERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 324 ~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
+..+..+.+++.-|+..||.+||.++.|+-.|+..
T Consensus 412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 44556788899999999999999999999888653
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2.9e-24 Score=188.67 Aligned_cols=201 Identities=21% Similarity=0.300 Sum_probs=169.4
Q ss_pred hcCCCCCCeeeccCCccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCeeEEEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 158 (407)
.-+|+++++||.|+||..+.|+ +-+++.||||.-... ...-++..|.+..+.| ..++|..++.+...+.+-.||+
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 3579999999999999999997 457999999965322 2334567788888877 5799999988888888888999
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-----CCceEEecccCccc
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-----KFQSKIGDFGLARF 233 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-----~~~~kl~Dfgla~~ 233 (407)
|.+ |.||+++..-..+ .++..++..+|.|++.-++|+|++. +|.|||||+|+||.. ...+.++|||+|+.
T Consensus 104 dLL-GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhh-CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 998 7799999875554 4899999999999999999999998 999999999999963 34689999999998
Q ss_pred cCCCCcc------cccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCC
Q 040557 234 FPEDQAY------LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTL 289 (407)
Q Consensus 234 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~ 289 (407)
+.+.... ......||.+||+-....+...+.+.|+-|+|-++.+++-|..||.+.-
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 8654332 2234679999999999999999999999999999999999999997543
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=2.5e-25 Score=220.80 Aligned_cols=258 Identities=23% Similarity=0.261 Sum_probs=191.9
Q ss_pred CCCCeeeccCCccEEEEEe-cCCcEEEEEEecc----ccC-hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 85 HPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCV----DKS-QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 85 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~----~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
....++|.|++|.|+.... ...+..+.|.+.. ... ......+..|+.+=..+.|+|++..+..+.+....+-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567899999998887753 3445455554431 111 112222566777777889999988887777666666669
Q ss_pred EeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCC
Q 040557 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 159 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
|||++ +|..++.. ...+....+..++.|++.|+.|+|+.| +.|||+|++|++++.++.+||+|||.+..+....
T Consensus 401 E~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 99888843 346888899999999999999999999 9999999999999999999999999998776433
Q ss_pred c---ccccccccCccccCccccccCCCCc-cccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccC
Q 040557 239 A---YLSTNFAGTLGYTAPEYAIRGELSE-KADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314 (407)
Q Consensus 239 ~---~~~~~~~gt~~y~aPE~~~~~~~~~-k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 314 (407)
. ......+|...|+|||.+.+..|+. ..||||.|+++..|++|+.||......+.++. .....+.. .
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-----~~~~~~~~----~ 545 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK-----TNNYSDQR----N 545 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh-----hhcccccc----c
Confidence 3 4456788999999999999999976 57999999999999999999976555443320 00000000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 040557 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTC 357 (407)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~ 357 (407)
............+.....++.++|+.||.+|-|+++|++.-|.
T Consensus 546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~ 588 (601)
T KOG0590|consen 546 IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWI 588 (601)
T ss_pred cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence 0011111223345567789999999999999999999988775
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=6.2e-23 Score=191.98 Aligned_cols=261 Identities=28% Similarity=0.371 Sum_probs=198.6
Q ss_pred CCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChh--hHHHHHHHHHHHHcCCCC-ceeeeeeeeecCCeeEEEEEe
Q 040557 84 FHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHK-NLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 160 (407)
|...+.||.|+||.||++... ..+++|.+....... ....+.+|..+++.+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999876 789999987655443 467899999999999888 799999999777778999999
Q ss_pred ccCCChhHHHhccCC-CCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC-ceEEecccCccccCCCC
Q 040557 161 MKNRSLDLLIYGESD-KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF-QSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~ 238 (407)
+.++++.+++..... ..+.......++.|++.++.|+|+.+ ++|||+||.||+++..+ .++++|||++..+....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999966643322 26889999999999999999999998 99999999999999988 79999999998665443
Q ss_pred cc-----cccccccCccccCcccccc---CCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccc
Q 040557 239 AY-----LSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRIL 310 (407)
Q Consensus 239 ~~-----~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (407)
.. ......|+..|++||.+.+ ..++...|+||+|++++++++|..|+...... ................
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc
Confidence 22 2355789999999999987 57889999999999999999999996543321 0011111212211111
Q ss_pred cccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 311 ELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
......... ........+.+++..|+..+|..|.+..+....
T Consensus 234 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -SLASPLSPS-NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -ccccccCcc-ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000001000 001223467789999999999999999988775
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=1.2e-24 Score=216.72 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=183.5
Q ss_pred CCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHH--HHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 83 NFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRM--ITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
++...+.||++.|=+|.+|++.+|. |+||++......-....|.++++- ...++|||.+++.-+-......|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5666788999999999999998777 999999766655555555555544 3445899999998887777778888888
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcc--ccCCCC
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQ 238 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~--~~~~~~ 238 (407)
..+ +|.+.+ ..+.++...+...|+.|++.|+.-+|..| |+|||||.+|||++.-..+.|+||..-+ +++.++
T Consensus 103 vkh-nLyDRl--STRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 103 VKH-NLYDRL--STRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred Hhh-hhhhhh--ccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 866 777777 45677888899999999999999999999 9999999999999999999999998775 233222
Q ss_pred c----ccccccccCccccCccccccC----------C-CCccccEEehhHHHHHHHhc-CCCCCCCCCcccCchhHHHHH
Q 040557 239 A----YLSTNFAGTLGYTAPEYAIRG----------E-LSEKADIYSFGVLVLEIISC-RKNTDLTLPSEMQYLPEYAWK 302 (407)
Q Consensus 239 ~----~~~~~~~gt~~y~aPE~~~~~----------~-~~~k~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~ 302 (407)
. +...+...-.+|+|||.+... . .+++-||||+||++.||++- +++|.... ...
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ----------L~a 246 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ----------LLA 246 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH----------HHh
Confidence 2 122233345589999977531 1 56789999999999999885 66664211 000
Q ss_pred HHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 303 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
+..+. ..|+...-+.. ....+.+++..|++.||++|.++++.++.-.
T Consensus 247 -Yr~~~---~~~~e~~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 247 -YRSGN---ADDPEQLLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred -HhccC---ccCHHHHHHhC---cCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 11111 11111111111 1125789999999999999999999998744
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=2.4e-23 Score=180.82 Aligned_cols=173 Identities=13% Similarity=0.100 Sum_probs=135.0
Q ss_pred HhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChh--hHHH------HHHHHHHHHcCCCCceeeeeeeeecC
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ--GESE------FLSEVRMITSIQHKNLVRLLGCCSDG 151 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~------~~~e~~~l~~l~h~niv~l~~~~~~~ 151 (407)
..++|+..+++|.|+||.||.... ++..+|+|.+....... .... +.+|++.+.++.|++|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 457899999999999999999766 57789999996543222 2222 57899999999999999988876533
Q ss_pred --------CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCce
Q 040557 152 --------SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS 223 (407)
Q Consensus 152 --------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~ 223 (407)
...+++|||++|.+|.++.. ++. ....+++.++..+|+.+ ++|||++|+||+++.++ +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-E
Confidence 35789999999999988731 222 24568999999999998 99999999999999988 9
Q ss_pred EEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHh
Q 040557 224 KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280 (407)
Q Consensus 224 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t 280 (407)
+|+|||.......+.... .+.....|..++|+||||+.+..+..
T Consensus 174 ~liDfg~~~~~~e~~a~d-------------~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKD-------------RIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEECCCcccccchhhHH-------------HHHHHhHhcccccccceeEeehHHHH
Confidence 999999987653322210 13445567789999999999987753
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=5.7e-23 Score=176.54 Aligned_cols=141 Identities=18% Similarity=0.145 Sum_probs=108.3
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccChh-h-------H-----------------HHHHHHHHHHHcCCCCce
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ-G-------E-----------------SEFLSEVRMITSIQHKNL 141 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~-------~-----------------~~~~~e~~~l~~l~h~ni 141 (407)
...||+|+||.||+|...+|+.||||+++...... . . .....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999999998789999999996542110 0 1 122359999999987776
Q ss_pred eeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccc-cccCCCceeeeccccccEEEcCC
Q 040557 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL-HEDSHTRIVHRDIKASNVLLDEK 220 (407)
Q Consensus 142 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~i~H~dlk~~Nill~~~ 220 (407)
.....+.. ...++||||++++++..... ....+++....+++.|++.+|.++ |+.+ ++||||||+|||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~- 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHD- 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEEC-
Confidence 43332221 22389999999887754432 234588999999999999999999 6888 999999999999984
Q ss_pred CceEEecccCccccC
Q 040557 221 FQSKIGDFGLARFFP 235 (407)
Q Consensus 221 ~~~kl~Dfgla~~~~ 235 (407)
+.++|+|||+|....
T Consensus 154 ~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 GKLYIIDVSQSVEHD 168 (190)
T ss_pred CcEEEEEccccccCC
Confidence 789999999997543
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=1.2e-21 Score=168.85 Aligned_cols=143 Identities=17% Similarity=0.128 Sum_probs=111.1
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccCh-------------------------hhHHHHHHHHHHHHcCCCCce
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ-------------------------QGESEFLSEVRMITSIQHKNL 141 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~e~~~l~~l~h~ni 141 (407)
...||+|++|.||+|...+|+.||||++...... .....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999998754211 001234578999999999887
Q ss_pred eeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCC
Q 040557 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEK 220 (407)
Q Consensus 142 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~ 220 (407)
.....+... ..++||||++++++..... ....++.....+++.|++.++.++|+ .+ ++||||||+||+++ +
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-C
Confidence 543333322 2489999999886543321 12347788899999999999999999 88 99999999999999 7
Q ss_pred CceEEecccCccccCCC
Q 040557 221 FQSKIGDFGLARFFPED 237 (407)
Q Consensus 221 ~~~kl~Dfgla~~~~~~ 237 (407)
+.++|+|||++......
T Consensus 154 ~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 154 GKPYIIDVSQAVELDHP 170 (190)
T ss_pred CCEEEEEcccceecCCC
Confidence 89999999999876543
No 417
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.87 E-value=8.2e-22 Score=187.29 Aligned_cols=217 Identities=26% Similarity=0.406 Sum_probs=162.3
Q ss_pred HHcCCCCceeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeecccc
Q 040557 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKA 212 (407)
Q Consensus 133 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~ 212 (407)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+... ...+++.....+..+++.||.|||... -..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeecc
Confidence 35678999999999999999999999999999999999763 445899999999999999999999864 239999999
Q ss_pred ccEEEcCCCceEEecccCccccCCCCc-ccccccccCccccCccccccC-------CCCccccEEehhHHHHHHHhcCCC
Q 040557 213 SNVLLDEKFQSKIGDFGLARFFPEDQA-YLSTNFAGTLGYTAPEYAIRG-------ELSEKADIYSFGVLVLEIISCRKN 284 (407)
Q Consensus 213 ~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-------~~~~k~Dv~s~G~vl~el~tg~~p 284 (407)
.|.++|..+.+||+|||+......... .......-..-|.|||.+... ..+.++||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 999999999999999999987743111 111122234579999988763 146789999999999999999999
Q ss_pred CCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 285 TDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
|+........ .+.+.. +.. .-...+-|.+... .+....+..++..||..+|++||++++|-..+....
T Consensus 158 ~~~~~~~~~~--~eii~~-~~~-~~~~~~rP~i~~~---~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 158 FDLRNLVEDP--DEIILR-VKK-GGSNPFRPSIELL---NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred cccccccCCh--HHHHHH-HHh-cCCCCcCcchhhh---hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9864433321 122222 111 1111122222211 123346889999999999999999999988876543
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=3.5e-21 Score=163.82 Aligned_cols=185 Identities=17% Similarity=0.056 Sum_probs=137.7
Q ss_pred CCCeeeccCCccEEEEEecCCcEEEEEEeccccCh---hhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEEEEec
Q 040557 86 PGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ---QGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 86 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
....|++|+||+||.+.. .+..++.+.+...... .....+.+|+++|.++. |+++.+++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999998776 6788887777543321 11235789999999995 5889999886 3469999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeecc-ccccEEEcCCCceEEecccCccccCCCCcc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDI-KASNVLLDEKFQSKIGDFGLARFFPEDQAY 240 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dl-k~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 240 (407)
.|.+|...... . ...++.|++.++.++|+.| |+|||| ||.|||++.++.++|+|||++.........
T Consensus 81 ~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 81 AGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred cCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99988654311 1 1357789999999999999 999999 799999999999999999999866543321
Q ss_pred ----c--------ccccccCccccCccccccC-CCC-ccccEEehhHHHHHHHhcCCCCCC
Q 040557 241 ----L--------STNFAGTLGYTAPEYAIRG-ELS-EKADIYSFGVLVLEIISCRKNTDL 287 (407)
Q Consensus 241 ----~--------~~~~~gt~~y~aPE~~~~~-~~~-~k~Dv~s~G~vl~el~tg~~p~~~ 287 (407)
. ..-...++.|++|+...-- ..+ ...+.++-|.-+|.++|++.+.-.
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 1112357777788744322 222 456888999999999999977643
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2e-21 Score=174.68 Aligned_cols=193 Identities=22% Similarity=0.291 Sum_probs=136.1
Q ss_pred CCCceeeeeeeeec---------------------------CCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHH
Q 040557 137 QHKNLVRLLGCCSD---------------------------GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189 (407)
Q Consensus 137 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ 189 (407)
+|||||+++++|.+ +...|+||.-++. +|.+++..+. .+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999987632 3456899988865 8999986544 455566678899
Q ss_pred HHHHhccccccCCCceeeeccccccEEEc--CC--CceEEecccCccccCC-----CCcccccccccCccccCccccccC
Q 040557 190 IARGLQYLHEDSHTRIVHRDIKASNVLLD--EK--FQSKIGDFGLARFFPE-----DQAYLSTNFAGTLGYTAPEYAIRG 260 (407)
Q Consensus 190 i~~~l~~LH~~~~~~i~H~dlk~~Nill~--~~--~~~kl~Dfgla~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~ 260 (407)
+++|+.|||.+| +.|||+|++|||+. +| -.+.|+|||++-.-.. ......-...|...-||||+....
T Consensus 350 lLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 999999999999 99999999999994 33 3578999999853221 111111234578889999977542
Q ss_pred C------CCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHH
Q 040557 261 E------LSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVA 334 (407)
Q Consensus 261 ~------~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~ 334 (407)
+ .-.|+|.|+.|-+.||+++...||...-....+ . ..+++.++ | ..++.++..+.+++
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~---~---r~Yqe~qL-----P-----alp~~vpp~~rqlV 490 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD---T---RTYQESQL-----P-----ALPSRVPPVARQLV 490 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec---h---hhhhhhhC-----C-----CCcccCChHHHHHH
Confidence 2 135899999999999999999999752111000 0 00111111 1 23344566788999
Q ss_pred HHccCCCCCCCCCHHHHH
Q 040557 335 FICLQPHGNQRPPMSEIV 352 (407)
Q Consensus 335 ~~cl~~~p~~RPs~~ev~ 352 (407)
...|+.||++|++..-..
T Consensus 491 ~~lL~r~pskRvsp~iAA 508 (598)
T KOG4158|consen 491 FDLLKRDPSKRVSPNIAA 508 (598)
T ss_pred HHHhcCCccccCCccHHH
Confidence 999999999999965443
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=7.5e-22 Score=187.67 Aligned_cols=226 Identities=21% Similarity=0.254 Sum_probs=177.7
Q ss_pred eeeccCCccEEEEE----ecCCcEEEEEEeccccChhh-HHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEEEEecc
Q 040557 89 LLGRGGFGPVYRGK----LADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 162 (407)
.+|+|+||.|+.++ ...|..+|.|.+++...... ......|..++..++ ||.++++...+......+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999874 23477899998865442211 124456777888885 9999999999999999999999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccc
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 242 (407)
||.|...+. ....+++.........++-+++++|+.+ ++|||+|++||+++.+|.+++.|||+++..-.....
T Consensus 81 gg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 81 GGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred cchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 999877763 3344666777778889999999999999 999999999999999999999999999876544432
Q ss_pred cccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCC
Q 040557 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGI 322 (407)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 322 (407)
+||..|||||++. .....+|.||||++++||+||..||.. +....+... +...
T Consensus 154 ---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----------~~~~~Il~~------------~~~~ 206 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----------DTMKRILKA------------ELEM 206 (612)
T ss_pred ---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----------HHHHHHhhh------------ccCC
Confidence 8999999999888 567889999999999999999999874 111111110 1124
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH
Q 040557 323 VERDALQVINVAFICLQPHGNQRPPM 348 (407)
Q Consensus 323 ~~~~~~~l~~l~~~cl~~~p~~RPs~ 348 (407)
+......+.+++..++..+|.+|.-.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 45556667788889999999999865
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.83 E-value=1.2e-20 Score=168.84 Aligned_cols=232 Identities=21% Similarity=0.244 Sum_probs=148.1
Q ss_pred CCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCC----------Cceeeeeeee--
Q 040557 84 FHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQH----------KNLVRLLGCC-- 148 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~-- 148 (407)
+..++.||.|+++.||.+.+. +|+.+|+|.+..... ....+.+.+|.-....+.+ -.++..++..
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 344578999999999999875 589999999865442 2334566666654444322 1222222211
Q ss_pred -------ecC---C-----eeEEEEEeccCCChhHHHhc---cC--CCCCCHHHHHHHHHHHHHHhccccccCCCceeee
Q 040557 149 -------SDG---S-----QRLLVYEYMKNRSLDLLIYG---ES--DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208 (407)
Q Consensus 149 -------~~~---~-----~~~lv~e~~~~g~L~~~l~~---~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~ 208 (407)
... . ..+++|+-+ .++|..++.. .. ...+....+..+..|+++.+++||+.| ++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEec
Confidence 111 1 236677777 4588776532 11 223456667788899999999999999 9999
Q ss_pred ccccccEEEcCCCceEEecccCccccCCCCcccccccccCccccCccccccC--------CCCccccEEehhHHHHHHHh
Q 040557 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG--------ELSEKADIYSFGVLVLEIIS 280 (407)
Q Consensus 209 dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~k~Dv~s~G~vl~el~t 280 (407)
||+|+|++++.+|.+.|+||+.....+..... ...+..|.+||..... .++.+.|.|++|+++|.|++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999888755432221 2345779999976442 46889999999999999999
Q ss_pred cCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCC
Q 040557 281 CRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQR 345 (407)
Q Consensus 281 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R 345 (407)
|+.||+...+...... .+ ..+. +.+..+..||..+|+.||++|
T Consensus 246 ~~lPf~~~~~~~~~~~-------------------~f--~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW-------------------DF--SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG-------------------GG--TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc-------------------cc--hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999986543322110 11 1133 567778899999999999988
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=156.71 Aligned_cols=135 Identities=15% Similarity=0.206 Sum_probs=103.5
Q ss_pred CCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-----CCCceeeeeeeeecCC---e-eEE
Q 040557 86 PGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-----QHKNLVRLLGCCSDGS---Q-RLL 156 (407)
Q Consensus 86 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l 156 (407)
..+.||+|+||.||. +++....+||++.... ......+.+|+.++..+ +||||++++|++.+.. . +.+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCeEEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 357899999999996 4333334799886432 23456789999999999 5799999999998763 3 347
Q ss_pred EEEe--ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHh-ccccccCCCceeeeccccccEEEcC----CCceEEeccc
Q 040557 157 VYEY--MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL-QYLHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFG 229 (407)
Q Consensus 157 v~e~--~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~i~H~dlk~~Nill~~----~~~~kl~Dfg 229 (407)
|+|| +.+|+|.+++... .+++. ..++.+++.++ +|||+++ |+||||||+|||++. +..++|+||+
T Consensus 83 I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 8999 5579999999542 25555 35677888777 9999998 999999999999973 3479999944
Q ss_pred Cc
Q 040557 230 LA 231 (407)
Q Consensus 230 la 231 (407)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 423
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=7.6e-21 Score=177.53 Aligned_cols=175 Identities=26% Similarity=0.371 Sum_probs=132.5
Q ss_pred eeEEEEEeccCCChhHHHhcc-CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 153 QRLLVYEYMKNRSLDLLIYGE-SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 153 ~~~lv~e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
.+|+.|++|.-.+|.+|+..+ .....++.....++.|++.|++| ++ .+|+|+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999633 34557889999999999999999 56 999999999999999999999999999
Q ss_pred cccCCCC-----cccccccccCccccCccccccCCCCccccEEehhHHHHHHHh-cCCCCCCCCCcccCchhHHHHHHHH
Q 040557 232 RFFPEDQ-----AYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS-CRKNTDLTLPSEMQYLPEYAWKLYE 305 (407)
Q Consensus 232 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 305 (407)
....... ....+...||..||+||.+.+..|+.|+||||||++|+||++ -...++. .-....+.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----------~~t~~d~r 473 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----------IATLTDIR 473 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----------HHhhhhhh
Confidence 8776554 333456789999999999999999999999999999999997 2222210 00111122
Q ss_pred hCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040557 306 RGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVA 353 (407)
Q Consensus 306 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~ 353 (407)
.+.+. +....+ -..-+.++.+++.+.|.+||++.++..
T Consensus 474 ~g~ip----~~~~~d------~p~e~~ll~~lls~~p~~RP~~~~~~~ 511 (516)
T KOG1033|consen 474 DGIIP----PEFLQD------YPEEYTLLQQLLSPSPEERPSAIEVAL 511 (516)
T ss_pred cCCCC----hHHhhc------CcHHHHHHHHhcCCCcccCchHHHHhh
Confidence 22221 111111 122357899999999999996655543
No 424
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=5e-19 Score=153.84 Aligned_cols=148 Identities=19% Similarity=0.183 Sum_probs=113.6
Q ss_pred HHHHHhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccCh---------------------hhHHHHHHHHHHHH
Q 040557 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ---------------------QGESEFLSEVRMIT 134 (407)
Q Consensus 76 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~e~~~l~ 134 (407)
++......|.+.+.||+|+||.||++...+|+.||||++...... .....+..|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344444458888999999999999999888999999987543210 01123567888888
Q ss_pred cCCCCc--eeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeecccc
Q 040557 135 SIQHKN--LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKA 212 (407)
Q Consensus 135 ~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~ 212 (407)
.+.|.+ +...++. ...++||||+++++|...... .....++.+++.++.++|+.+ ++||||+|
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p 153 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDLSE 153 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCc
Confidence 887774 4444432 345899999999998765421 234578899999999999988 99999999
Q ss_pred ccEEEcCCCceEEecccCccccCCCC
Q 040557 213 SNVLLDEKFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 213 ~Nill~~~~~~kl~Dfgla~~~~~~~ 238 (407)
+||++++++.++|+|||++.......
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~~~~ 179 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTDHPN 179 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCCCcc
Confidence 99999999999999999997665443
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=6.6e-19 Score=154.77 Aligned_cols=135 Identities=24% Similarity=0.340 Sum_probs=112.9
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccCh-------hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ-------QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
+.||+|++|.||+|.. +|..+++|........ .....+.+|++++..+.|+++.....++.+....+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6788999986533211 1224678899999999999988777777677788999999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
++|++|.+++.... + .+..++.+++.++.++|+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999885321 2 77889999999999999998 99999999999999 78999999999874
No 426
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=3.6e-19 Score=180.75 Aligned_cols=193 Identities=20% Similarity=0.225 Sum_probs=154.0
Q ss_pred HhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC---CCceeeeeeeeecCCeeEE
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ---HKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~l 156 (407)
....|.+.+.||+|+||+||.|...+|+.||+|.-+.....+ |+=-.+++.+|+ -+-|..+..++.-.+.-+|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 346788888999999999999998889999999875444322 222223333333 2334444455555677789
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc-------CCCceEEeccc
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD-------EKFQSKIGDFG 229 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~-------~~~~~kl~Dfg 229 (407)
|+||.+.|+|.+++. ..+.++|.....++.|++..++.||..+ |||+||||+|+||. +...++|+|||
T Consensus 772 v~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred eeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecc
Confidence 999999999999994 6667999999999999999999999998 99999999999994 34568999999
Q ss_pred CccccC---CCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCC
Q 040557 230 LARFFP---EDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRK 283 (407)
Q Consensus 230 la~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~ 283 (407)
-+..+. +. ..-...++|-.+-.+|+..+..++...|.|.|+-+++-|+.|+.
T Consensus 847 ~siDm~lfp~~--~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 847 RSIDMKLFPDG--TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceeeeEcCCC--cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 996543 33 22345678999999999999999999999999999999999984
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.79 E-value=8.4e-19 Score=155.80 Aligned_cols=144 Identities=17% Similarity=0.148 Sum_probs=111.1
Q ss_pred CCCCCCeeeccCCccEEEEE--ecCCcEEEEEEeccccCh-----------------------hhHHHHHHHHHHHHcCC
Q 040557 83 NFHPGNLLGRGGFGPVYRGK--LADGTLVAVKKLCVDKSQ-----------------------QGESEFLSEVRMITSIQ 137 (407)
Q Consensus 83 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~e~~~l~~l~ 137 (407)
-|.+.+.||+|+||.||+|. ..+|+.||+|.+...... .....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999998 568999999998643210 01123568999999996
Q ss_pred CC--ceeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccE
Q 040557 138 HK--NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNV 215 (407)
Q Consensus 138 h~--niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Ni 215 (407)
+. .+.+++++ ...++||||+++++|...... ...+.......++.|++.++.+||+.+ +++||||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhE
Confidence 53 34455543 234899999999888665422 233556667889999999999999875 499999999999
Q ss_pred EEcCCCceEEecccCccccC
Q 040557 216 LLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 216 ll~~~~~~kl~Dfgla~~~~ 235 (407)
+++ ++.++|+|||++....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 7899999999987543
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=1.2e-18 Score=151.65 Aligned_cols=131 Identities=22% Similarity=0.376 Sum_probs=105.9
Q ss_pred eeeccCCccEEEEEecCCcEEEEEEeccccCh-------hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEec
Q 040557 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ-------QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 161 (407)
.||+|+||.||+|.. +|..+++|........ ....++.+|++++..+.|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 5788999986533211 12356778999999998887655444555566779999999
Q ss_pred cCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 162 KNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 162 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
+|++|.+++..... .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999888743211 78999999999999998 99999999999999 78999999999875
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.77 E-value=1.3e-18 Score=173.61 Aligned_cols=141 Identities=18% Similarity=0.310 Sum_probs=113.3
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEecccc--C-----hhhHHHHHHHHHHHHcCCCCceeeeeeeeecC
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK--S-----QQGESEFLSEVRMITSIQHKNLVRLLGCCSDG 151 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 151 (407)
.....|...+.||+|+||.||+|.+.+. .+++|+..... . .....++.+|++++..++|++++....++.+.
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 3344556778999999999999987543 44445432211 1 12235688999999999999998887777777
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
...++||||+++++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ +++.++|+|||++
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccc
Confidence 78899999999999998874 34678999999999999998 9999999999999 5779999999999
Q ss_pred ccc
Q 040557 232 RFF 234 (407)
Q Consensus 232 ~~~ 234 (407)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.76 E-value=2e-19 Score=179.61 Aligned_cols=208 Identities=21% Similarity=0.269 Sum_probs=142.7
Q ss_pred cCCCCCCeeeccCCccEEEEEecC-CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
.+|...+.|..|+||.||.++++. .+.+|.| +++.+ .+.+. ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~------lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN------LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccc------hhhhc--cccccCCccee------------------
Confidence 678888999999999999998753 5677874 32211 01111 22222333333
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCC---
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED--- 237 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~--- 237 (407)
|+=...+.+. +.++... +.+++|||+.+ |+|||+||+|.+|+.-|.+|++|||+++.....
T Consensus 136 ---gDc~tllk~~--g~lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNI--GPLPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccC--CCCcchh--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 3333333222 2233222 78899999998 999999999999999999999999999754211
Q ss_pred -----------CcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHh
Q 040557 238 -----------QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYER 306 (407)
Q Consensus 238 -----------~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 306 (407)
.......++||+.|+|||++....|...+|+|++|+++||.+-|..||+++.+++.- ...+.+
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf------g~visd 273 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF------GQVISD 273 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH------hhhhhh
Confidence 111233568999999999999999999999999999999999999999987665421 111111
Q ss_pred CccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 040557 307 GRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPP 347 (407)
Q Consensus 307 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs 347 (407)
. +...+..+..+.++.+++.+.|+.+|..|--
T Consensus 274 ~---------i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 274 D---------IEWPEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred h---------ccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 0 0000112233456888999999999999963
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71 E-value=6.3e-17 Score=139.35 Aligned_cols=139 Identities=20% Similarity=0.212 Sum_probs=98.1
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccChh-hHHH----------------------HHHHHHHHHcCCCC--ce
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ-GESE----------------------FLSEVRMITSIQHK--NL 141 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~----------------------~~~e~~~l~~l~h~--ni 141 (407)
.+.||+|+||.||+|...+|+.||||++....... .... ...|.+.+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998789999999986432111 1111 13455566655433 24
Q ss_pred eeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cCCCceeeeccccccEEEcCC
Q 040557 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DSHTRIVHRDIKASNVLLDEK 220 (407)
Q Consensus 142 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~dlk~~Nill~~~ 220 (407)
.+.+++ ...++||||++++++......... .. .....++.+++.++.++|. .+ ++|+||||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-C
Confidence 444443 245899999999544221110000 11 5667899999999999999 77 99999999999999 8
Q ss_pred CceEEecccCccccCC
Q 040557 221 FQSKIGDFGLARFFPE 236 (407)
Q Consensus 221 ~~~kl~Dfgla~~~~~ 236 (407)
+.++|+|||.+.....
T Consensus 151 ~~~~liDfg~a~~~~~ 166 (187)
T cd05119 151 GKVYIIDVPQAVEIDH 166 (187)
T ss_pred CcEEEEECcccccccC
Confidence 8999999999975543
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.70 E-value=1.6e-16 Score=131.43 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=113.0
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCC--CceeeeeeeeecCCeeEEEEEeccCC
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH--KNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
.+.||+|.++.||++... +..+++|....... ...+.+|...+..+.| .++.+++++....+..+++|||++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred ceecccccccceEEEEec-CCeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 467999999999999985 47899998754332 4568899999999976 58999999888888899999999987
Q ss_pred ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 165 SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 165 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
.+..+ +......++.+++.++.++|.....+++|+|++|+||++++++.++++|||.+...
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 76543 55666778999999999999864445999999999999999899999999998753
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=6e-18 Score=168.41 Aligned_cols=262 Identities=22% Similarity=0.268 Sum_probs=193.3
Q ss_pred hcCCCCCCeeeccCCccEEEEEec--CCcEEEEEEecccc-ChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEE
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLA--DGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLL 156 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 156 (407)
...|...+.||+|+|+.|-..... ....+|+|.+.... ..........|..+-..+. |.|++.+++...+....++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 345677778999999999888653 34556666664332 2233344445777666675 9999999999999999999
Q ss_pred EEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhcccc-ccCCCceeeeccccccEEEcCCC-ceEEecccCcccc
Q 040557 157 VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLH-EDSHTRIVHRDIKASNVLLDEKF-QSKIGDFGLARFF 234 (407)
Q Consensus 157 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~ 234 (407)
.++|..++++...+........+....-..+.|+..++.|+| ..+ +.|+|+||+|.+++..+ ..+++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999999887773222224566667789999999999999 777 99999999999999999 9999999999987
Q ss_pred CC--CCccccccccc-CccccCccccccC-CCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccc
Q 040557 235 PE--DQAYLSTNFAG-TLGYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRIL 310 (407)
Q Consensus 235 ~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (407)
.. .........+| ++.|+|||...+. ......|+||.|+++.-+++|..|++........+.. |
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~-~----------- 243 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS-W----------- 243 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccccee-e-----------
Confidence 76 22333345678 9999999998885 4467899999999999999999999866554422211 1
Q ss_pred cccCcccc-cCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccc
Q 040557 311 ELVDPRMR-KEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKV 359 (407)
Q Consensus 311 ~~~d~~~~-~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~~ 359 (407)
.+.... .............++...++..+|+.|.+.+++...-|...
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 244 --KSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred --cccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 111000 00011122344677888899999999999999987766543
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.67 E-value=6.2e-16 Score=137.70 Aligned_cols=137 Identities=18% Similarity=0.229 Sum_probs=105.8
Q ss_pred CCeee-ccCCccEEEEEecCCcEEEEEEecccc------------ChhhHHHHHHHHHHHHcCCCCce--eeeeeeeecC
Q 040557 87 GNLLG-RGGFGPVYRGKLADGTLVAVKKLCVDK------------SQQGESEFLSEVRMITSIQHKNL--VRLLGCCSDG 151 (407)
Q Consensus 87 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~ 151 (407)
+..|| .||.|+||.+... +..++||.+.... .......+.+|++++..+.|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 8999999999884 7789999885321 01233567899999999988775 6677664332
Q ss_pred C----eeEEEEEeccC-CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEe
Q 040557 152 S----QRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIG 226 (407)
Q Consensus 152 ~----~~~lv~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~ 226 (407)
. ..++|||+++| .+|.+++.. ..++.. .+.+++.++.+||+.| |+||||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 688888743 234443 3568999999999999 9999999999999998899999
Q ss_pred cccCcccc
Q 040557 227 DFGLARFF 234 (407)
Q Consensus 227 Dfgla~~~ 234 (407)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99999754
No 435
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.59 E-value=1.1e-14 Score=140.80 Aligned_cols=147 Identities=22% Similarity=0.274 Sum_probs=101.6
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChh---------------------------------------h
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ---------------------------------------G 122 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------------------------------------~ 122 (407)
..|. .+.||+|++|.||+|++.+|+.||||+.+...... .
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 36799999999999999999999999986432110 0
Q ss_pred HHHHHHHHHHHHcCC----CCceeeeeeee-ecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHH-Hhcc
Q 040557 123 ESEFLSEVRMITSIQ----HKNLVRLLGCC-SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR-GLQY 196 (407)
Q Consensus 123 ~~~~~~e~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~-~l~~ 196 (407)
+-+|.+|.+.+.++. |.+-+.+-..+ ...+..++||||++|++|.++....... .+ +.+++..++. .+..
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQ 272 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHH
Confidence 012445665555542 22223322222 2234579999999999998876432111 22 3446666655 4677
Q ss_pred ccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 197 LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
+|..| ++|+|++|.||++++++.++++|||++..+..
T Consensus 273 l~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 273 VLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 88887 99999999999999999999999999987654
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=1.1e-14 Score=128.81 Aligned_cols=204 Identities=20% Similarity=0.238 Sum_probs=139.5
Q ss_pred HHHHcCCCCceeeeeeeeecCC-----eeEEEEEeccCCChhHHHhccC--CCCCCHHHHHHHHHHHHHHhccccccCCC
Q 040557 131 RMITSIQHKNLVRLLGCCSDGS-----QRLLVYEYMKNRSLDLLIYGES--DKFLNWSTRFQIILGIARGLQYLHEDSHT 203 (407)
Q Consensus 131 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 203 (407)
..|-++.|.|||++..|+.+.. ...+++|||..|++..+|+... ...+......+|+-||..||.|||+- .|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 3455667999999999886543 4678999999999999996433 45578888889999999999999996 58
Q ss_pred ceeeeccccccEEEcCCCceEEecccCccccCC----CCcccccccccCccccCccccccCCCCccccEEehhHHHHHHH
Q 040557 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE----DQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279 (407)
Q Consensus 204 ~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~ 279 (407)
+++|+++..+.|++..++-+|+.-- -...... ........-.+-++|.+||.=.....+..+|||+||...+||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~-ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSV-APDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEeccc-CccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 8999999999999998888887432 1111111 0011111234678999999877777788999999999999998
Q ss_pred hcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 040557 280 SCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356 (407)
Q Consensus 280 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~ 356 (407)
.+..-....... ...+. ... +.+ ..+...+ =..++..|++..|..||+|++++.|..
T Consensus 277 ilEiq~tnseS~---~~~ee---~ia-~~i-~~len~l------------qr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 277 ILEIQSTNSESK---VEVEE---NIA-NVI-IGLENGL------------QRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HheeccCCCcce---eehhh---hhh-hhe-eeccCcc------------ccCcCcccccCCCCCCcchhhhhcCce
Confidence 775432111100 00000 000 000 0000111 124677899999999999999987643
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.48 E-value=5.9e-14 Score=137.30 Aligned_cols=146 Identities=18% Similarity=0.186 Sum_probs=95.5
Q ss_pred HhcCCCCCCeeeccCCccEEEEEecC-CcEEEEEEeccccCh---------------------------------hhH--
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQ---------------------------------QGE-- 123 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---------------------------------~~~-- 123 (407)
....|+. +.||+|++|.||+|++.+ |+.||||+....... +-.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456776 789999999999999887 999999999643210 001
Q ss_pred ----HHHHHHHHHHHcCC----CCceeeeeeeeec-CCeeEEEEEeccCCChhHHHhccCCC----CCCHHHHHHHHHHH
Q 040557 124 ----SEFLSEVRMITSIQ----HKNLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDK----FLNWSTRFQIILGI 190 (407)
Q Consensus 124 ----~~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~----~l~~~~~~~i~~~i 190 (407)
-++.+|+..+.++. +.+.+.+-.++.+ ....++||||++|+.+.++..-...+ .+.......++.|+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 12344444444442 3333333333322 34568999999999997753211111 13333333344444
Q ss_pred HHHhccccccCCCceeeeccccccEEEcCCC----ceEEecccCccccCC
Q 040557 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPE 236 (407)
Q Consensus 191 ~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~----~~kl~Dfgla~~~~~ 236 (407)
. ..| ++|+|+||.||+++.++ .++++|||++..++.
T Consensus 277 f-------~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 F-------RDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred H-------hCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3 355 99999999999999888 999999999987754
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=8.8e-14 Score=132.92 Aligned_cols=250 Identities=22% Similarity=0.225 Sum_probs=178.6
Q ss_pred cCCCCCCeeec--cCCccEEEEEe---cCCcEEEEEEeccccC-hhhHHHHHHHHHHHHcC-CCCceeeeeeeeecCCee
Q 040557 82 KNFHPGNLLGR--GGFGPVYRGKL---ADGTLVAVKKLCVDKS-QQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQR 154 (407)
Q Consensus 82 ~~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 154 (407)
..+.....+|. |.+|.||.+.. .++..+|+|+-+.... .....+=++|+....++ .|+|.++....+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 44556678999 99999999976 3688899997432211 11222234677666666 599999988889999999
Q ss_pred EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHH----HhccccccCCCceeeeccccccEEEcCC-CceEEeccc
Q 040557 155 LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR----GLQYLHEDSHTRIVHRDIKASNVLLDEK-FQSKIGDFG 229 (407)
Q Consensus 155 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfg 229 (407)
++-+|++. .+|..+.+.. ...++....+....+... |+.++|+.+ ++|-|+||.||+...+ ...+++|||
T Consensus 194 fiqtE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 99999985 6777776533 344677777777777777 999999988 9999999999999999 889999999
Q ss_pred CccccCCCCccc----ccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCchhHHHHHHHH
Q 040557 230 LARFFPEDQAYL----STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYE 305 (407)
Q Consensus 230 la~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 305 (407)
+...+.+..... .....|...|++|| ...+-++..+|+|++|.++.+..++........-.... ..+
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke-~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~--------~~r 339 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKE-LLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS--------QLR 339 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChh-hhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc--------ccc
Confidence 999886554221 12235778899999 55667889999999999999999988765432111110 001
Q ss_pred hCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040557 306 RGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAM 354 (407)
Q Consensus 306 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~ 354 (407)
......++...-...+...+.++++.+|-.|++...+..+
T Consensus 340 ---------~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 340 ---------QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ---------cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 0001111111122334458888999999999998888654
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.41 E-value=7.1e-13 Score=112.10 Aligned_cols=130 Identities=18% Similarity=0.107 Sum_probs=95.4
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCcee-eeeeeeecCCeeEEEEEeccCCCh
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV-RLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
+.|+.|.++.||++... |..|++|....... ....+..|+.++..+.+.+++ +++.+. ....++||||++|.++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 56889999999999874 78899998743321 223457889998888655544 455443 2345899999999877
Q ss_pred hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccC--CCceeeeccccccEEEcCCCceEEecccCccc
Q 040557 167 DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS--HTRIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 167 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.... . ....++.++++++..||+.+ ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 5430 0 11345678999999999986 22369999999999999 66899999998863
No 440
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.39 E-value=4.9e-12 Score=103.64 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=109.2
Q ss_pred CCCeeeccCCccEEEEEecCCcEEEEEEeccccC-------hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEE
Q 040557 86 PGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKS-------QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 86 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 158 (407)
....+-+|+-+.|+++.+ .|+.+.||.-..+.. +-...+..+|++.|.++.--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 356899999999999998 488888886543321 123456789999999987656655455566666778999
Q ss_pred EeccC-CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCC---ceEEecccCccc
Q 040557 159 EYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF---QSKIGDFGLARF 233 (407)
Q Consensus 159 e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~---~~kl~Dfgla~~ 233 (407)
||++| .++.+++...............++..|-+.+.-||.++ ++|+||..+||+|..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 46777776554444444444788899999999999998 99999999999997544 458999999964
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.35 E-value=1.4e-11 Score=105.10 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=99.5
Q ss_pred CeeeccCCccEEEEEecC-------CcEEEEEEeccccC---------------------hhhHHHHH----HHHHHHHc
Q 040557 88 NLLGRGGFGPVYRGKLAD-------GTLVAVKKLCVDKS---------------------QQGESEFL----SEVRMITS 135 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~~~~~~~----~e~~~l~~ 135 (407)
..||.|--+.||.|...+ +..+|||..+.... ......+. +|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 47999998854210 01122233 79999998
Q ss_pred CCC--CceeeeeeeeecCCeeEEEEEeccCCChhH-HHhccCCCCCCHHHHHHHHHHHHHHhccc-cccCCCceeeeccc
Q 040557 136 IQH--KNLVRLLGCCSDGSQRLLVYEYMKNRSLDL-LIYGESDKFLNWSTRFQIILGIARGLQYL-HEDSHTRIVHRDIK 211 (407)
Q Consensus 136 l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~i~H~dlk 211 (407)
+.. -++..++++ ...++||||+.++.+.. .+. ...++......+..+++.+|..| |..+ ++|+||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 843 456666654 45689999997654421 221 12345556677889999999998 8887 9999999
Q ss_pred cccEEEcCCCceEEecccCccccCC
Q 040557 212 ASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 212 ~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
+.||++++ +.+.|+|||.+.....
T Consensus 153 ~~NIL~~~-~~v~iIDF~qav~~~h 176 (197)
T cd05146 153 EYNMLWHD-GKVWFIDVSQSVEPTH 176 (197)
T ss_pred HHHEEEEC-CcEEEEECCCceeCCC
Confidence 99999974 5899999999876543
No 442
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=1.8e-11 Score=100.83 Aligned_cols=133 Identities=23% Similarity=0.312 Sum_probs=101.1
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccCh-------hhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEe
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ-------QGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 160 (407)
..+++|+-+.+|.+.+. |..+++|.-..+... -...+-.+|++++.++.--.|.-..-+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999774 555677754333211 1234567899999988655554444455577778899999
Q ss_pred ccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCcccc
Q 040557 161 MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 161 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 234 (407)
++|..|.+.+... ...++..+-.-+.-||..+ |+|+||.++||++..+. +.++||||+...
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999888533 2567778888888999998 99999999999998874 999999999743
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.31 E-value=1.5e-11 Score=108.61 Aligned_cols=143 Identities=20% Similarity=0.240 Sum_probs=107.0
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCC--CceeeeeeeeecCC---eeEEEEEecc
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH--KNLVRLLGCCSDGS---QRLLVYEYMK 162 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~e~~~ 162 (407)
+.|+.|..+.||++...+|+.+++|.............+.+|.+++..+.+ .++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 468999999999998877789999987543322234567899999999865 44577777766542 5689999999
Q ss_pred CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccC-----------------------------------------
Q 040557 163 NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS----------------------------------------- 201 (407)
Q Consensus 163 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 201 (407)
|.++...+.. ..++......++.++++++..||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888665421 23666677777777777777777521
Q ss_pred ------------CCceeeeccccccEEEcC--CCceEEecccCccc
Q 040557 202 ------------HTRIVHRDIKASNVLLDE--KFQSKIGDFGLARF 233 (407)
Q Consensus 202 ------------~~~i~H~dlk~~Nill~~--~~~~kl~Dfgla~~ 233 (407)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 234899999999999998 66789999998864
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=1.6e-12 Score=124.29 Aligned_cols=265 Identities=22% Similarity=0.240 Sum_probs=182.2
Q ss_pred CCcccccccCHHH-HHHHhcCCCCCCeeeccCCccEEEEEe--cCCcEEEEEEeccccChh-hHHHHHHHHHHHHcC-CC
Q 040557 64 GNLRTISYFDFQT-LKKATKNFHPGNLLGRGGFGPVYRGKL--ADGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSI-QH 138 (407)
Q Consensus 64 ~~~~~~~~~~~~~-~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l-~h 138 (407)
...+...+|...+ ......+|.....||.|.|+.|+.... .++..|++|.+....... +...-+.|+.+...+ .|
T Consensus 246 ~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~ 325 (524)
T KOG0601|consen 246 DDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSH 325 (524)
T ss_pred cccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcc
Confidence 3334444455444 344556788889999999999999853 468899999875443222 222224566666666 58
Q ss_pred CceeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEc
Q 040557 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218 (407)
Q Consensus 139 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~ 218 (407)
.++++.+..+....+.|+--||++++++.... .....++...++++..|++.++.++|+.. ++|+|++|+||++.
T Consensus 326 ~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~ 400 (524)
T KOG0601|consen 326 LPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILIS 400 (524)
T ss_pred cccCCCCCCccccccccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeec
Confidence 88888877776667778889999999887665 22344778888999999999999999988 99999999999999
Q ss_pred CC-CceEEecccCccccCCCCcccccccccCcccc--CccccccCCCCccccEEehhHHHHHHHhcCCCCCCCCCcccCc
Q 040557 219 EK-FQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT--APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQY 295 (407)
Q Consensus 219 ~~-~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~ 295 (407)
.+ +..++.|||++..+.-.. .......+++ +++......+..+.|++|||.-+.|.++|..-......
T Consensus 401 ~~~~~~~~~~~~~~t~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----- 471 (524)
T KOG0601|consen 401 NDGFFSKLGDFGCWTRLAFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----- 471 (524)
T ss_pred cchhhhhccccccccccceec----ccccccccccccchhhccccccccccccccccccccccccCcccCccccc-----
Confidence 86 888999999997422111 1122334444 55555567788999999999999999998753221100
Q ss_pred hhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 040557 296 LPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l~~~ 358 (407)
| ..+..+.. +.. .....++..+...+..+++..||.+.++..+..+.
T Consensus 472 ---~--~~i~~~~~-----p~~------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 472 ---S--LTIRSGDT-----PNL------PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ---c--eeeecccc-----cCC------CchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 0 00011110 111 11124455667779999999999999988776544
No 445
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.30 E-value=1.6e-11 Score=118.76 Aligned_cols=168 Identities=19% Similarity=0.244 Sum_probs=125.0
Q ss_pred EecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHH
Q 040557 102 KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS 181 (407)
Q Consensus 102 ~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~ 181 (407)
+..++.+|.|...+.... .......+-+..|+.++||||++++..+...+..|+|+|-+. .|..++... ...
T Consensus 33 ~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l-----~~~ 104 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL-----GKE 104 (690)
T ss_pred eeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh-----HHH
Confidence 345788888888765544 444567788899999999999999999999999999999885 455555332 244
Q ss_pred HHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccccCccccCccccccCC
Q 040557 182 TRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261 (407)
Q Consensus 182 ~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 261 (407)
.....+.||+.||.|||..+ .++|++|.-..|++++.|.-||++|-++........ ......---.|..|+.+....
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc
Confidence 55567889999999998765 499999999999999999999999988865433221 011111222456666443322
Q ss_pred CCccccEEehhHHHHHHHhcC
Q 040557 262 LSEKADIYSFGVLVLEIISCR 282 (407)
Q Consensus 262 ~~~k~Dv~s~G~vl~el~tg~ 282 (407)
-..|.|.|||+++|++.|.
T Consensus 182 --~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred --cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999993
No 446
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.17 E-value=6.4e-10 Score=100.23 Aligned_cols=142 Identities=15% Similarity=0.052 Sum_probs=101.5
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChh----------hHHHHHHHHHHHHcCCC--Cceeeeeeeeec-----
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ----------GESEFLSEVRMITSIQH--KNLVRLLGCCSD----- 150 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~h--~niv~l~~~~~~----- 150 (407)
+.+-......|+++.+ +|+.|.||+........ ....+.+|.+.+.++.. -.+..++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4555445556777766 67899999774322111 11237789998888843 333455555533
Q ss_pred CCeeEEEEEeccCC-ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC-------CCc
Q 040557 151 GSQRLLVYEYMKNR-SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE-------KFQ 222 (407)
Q Consensus 151 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~-------~~~ 222 (407)
....++|||++++. +|.+++........+......++.+++..+.-||..| ++|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCce
Confidence 23468999999886 7888874322234566777889999999999999999 999999999999975 468
Q ss_pred eEEecccCccc
Q 040557 223 SKIGDFGLARF 233 (407)
Q Consensus 223 ~kl~Dfgla~~ 233 (407)
+.|+||+.+..
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998863
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.14 E-value=1.2e-11 Score=124.70 Aligned_cols=251 Identities=18% Similarity=0.192 Sum_probs=167.3
Q ss_pred HHhcCCCCCCeeeccCCccEEEEEe-cCCcEEEEEEeccccC--hhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeE
Q 040557 79 KATKNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRL 155 (407)
Q Consensus 79 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 155 (407)
...+.+.+.+-+-+|+++.++.+.- ..|...+.|....... ..+.+....+-.++-...+|-++...--+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 3456677777888999999998753 2344444444322111 111111222222222234566665554445567889
Q ss_pred EEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccC
Q 040557 156 LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 156 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
|+++|..+++|...++... ..+..........+..+.+|||... +.|+|++|.|.+...++..+++|||......
T Consensus 881 L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccc
Confidence 9999999999998886543 3455555566778889999999987 8999999999999999999999998443211
Q ss_pred C------------------------------CCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCC
Q 040557 236 E------------------------------DQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNT 285 (407)
Q Consensus 236 ~------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~ 285 (407)
. +.........||+.|.+||...+......+|.|++|++++|.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 0 0001122356899999999999999999999999999999999999999
Q ss_pred CCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 040557 286 DLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMS 349 (407)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ 349 (407)
....+... . ..++...+.....+........+++...+..+|.+|-.+.
T Consensus 1036 na~tpq~~-------f--------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQI-------F--------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhhh-------h--------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 86655321 1 1111111112222333344566777778899999998877
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.10 E-value=8.8e-10 Score=93.72 Aligned_cols=127 Identities=24% Similarity=0.254 Sum_probs=83.1
Q ss_pred cEEEEEecCCcEEEEEEeccccC-------------------------hhhHHHHHHHHHHHHcCCCC--ceeeeeeeee
Q 040557 97 PVYRGKLADGTLVAVKKLCVDKS-------------------------QQGESEFLSEVRMITSIQHK--NLVRLLGCCS 149 (407)
Q Consensus 97 ~Vy~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 149 (407)
.||.|...+|..+|||....... ........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999988999999998854210 01123567899999999765 456666553
Q ss_pred cCCeeEEEEEecc--CCChhHHHhccCCCCCCHHHHHHHHHHHHHHhcc-ccccCCCceeeeccccccEEEcCCCceEEe
Q 040557 150 DGSQRLLVYEYMK--NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY-LHEDSHTRIVHRDIKASNVLLDEKFQSKIG 226 (407)
Q Consensus 150 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~i~H~dlk~~Nill~~~~~~kl~ 226 (407)
...+||||++ |..+..+.... ++......++.+++..+.. +|..| ++|+||.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEE
Confidence 3479999999 65555544322 1123335566677775555 57877 9999999999999988 99999
Q ss_pred cccCccccC
Q 040557 227 DFGLARFFP 235 (407)
Q Consensus 227 Dfgla~~~~ 235 (407)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999987554
No 449
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.06 E-value=2e-09 Score=101.49 Aligned_cols=167 Identities=20% Similarity=0.307 Sum_probs=125.2
Q ss_pred ccEEEEE-ecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeee----cCCeeEEEEEeccC-CChhHH
Q 040557 96 GPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS----DGSQRLLVYEYMKN-RSLDLL 169 (407)
Q Consensus 96 g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-g~L~~~ 169 (407)
.+.|++. ..||..|++|++........ .....-++.++++.|.|+|++..++. .....++||+|+++ ++|.++
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~-nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQST-NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCc-ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 5789996 45899999999954332221 11235578889999999999988775 34578999999986 466555
Q ss_pred Hhcc-------------CCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 170 IYGE-------------SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 170 l~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
-... .+...++..+|.++.|+..||.++|+.| +.-+-|.+.+|+++.+.+++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 4321 1234678999999999999999999999 99999999999999999999998888776544
Q ss_pred CCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCC
Q 040557 237 DQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284 (407)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p 284 (407)
+.. |-+.+ -.+-|.=.||.+++-|.||...
T Consensus 446 d~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT---------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC---------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 431 10111 2356777899999999999653
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.05 E-value=1e-08 Score=94.53 Aligned_cols=260 Identities=15% Similarity=0.148 Sum_probs=157.7
Q ss_pred CCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC-CCCceeeeeee------eecCC-eeEE
Q 040557 85 HPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGC------CSDGS-QRLL 156 (407)
Q Consensus 85 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~------~~~~~-~~~l 156 (407)
..+..||+|+-+.+|-.--- +. .+.|+........ .. +.+..|... .||-+..-+.| ..+.. ..-+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~-~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAA-QA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh-hc-hhheeecCCCchH-HH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 45678999999999965321 12 2447664333221 11 233344444 56654331221 11222 2567
Q ss_pred EEEeccCCC-hhHHHh----ccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 157 VYEYMKNRS-LDLLIY----GESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 157 v~e~~~~g~-L~~~l~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
+|..+.+-- +..+.. .++....+|...++.+..++.+.+.||..| .+-+|++++|+|+.+++.+.|.|-...
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccce
Confidence 777776642 122221 123345789999999999999999999998 999999999999999999999996555
Q ss_pred cccCCCCcccccccccCccccCccccc-----cCCCCccccEEehhHHHHHHHhc-CCCCCCCCCccc-CchhHHHHHHH
Q 040557 232 RFFPEDQAYLSTNFAGTLGYTAPEYAI-----RGELSEKADIYSFGVLVLEIISC-RKNTDLTLPSEM-QYLPEYAWKLY 304 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~s~G~vl~el~tg-~~p~~~~~~~~~-~~~~~~~~~~~ 304 (407)
....++.. ...-+|...|.+||.-. +..-+...|.|.+|+++++++.| ++|+.+-..... ....+ ..+
T Consensus 165 qi~~ng~~--~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E---~~I 239 (637)
T COG4248 165 QINANGTL--HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE---TDI 239 (637)
T ss_pred eeccCCce--EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch---hhh
Confidence 44433322 23456889999999654 33457789999999999999988 888864321100 00000 011
Q ss_pred HhCccccccCcccc-----cCCCCHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHHhhcc
Q 040557 305 ERGRILELVDPRMR-----KEGIVERDALQVINVAFICLQP--HGNQRPPMSEIVAMLTCK 358 (407)
Q Consensus 305 ~~~~~~~~~d~~~~-----~~~~~~~~~~~l~~l~~~cl~~--~p~~RPs~~ev~~~l~~~ 358 (407)
..+.....-|.... ....-.-.+..+-.+..+|+.. ++.-|||++..+..|...
T Consensus 240 a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 240 AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 12222222221110 0111122345666778888876 466899999988776644
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.87 E-value=1.5e-08 Score=88.83 Aligned_cols=136 Identities=21% Similarity=0.184 Sum_probs=94.1
Q ss_pred CCCCCeeeccCCccEEEEEecCCcEEEEEEeccccC---------------------hhhHHHHHHHHHHHHcCCCC--c
Q 040557 84 FHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKS---------------------QQGESEFLSEVRMITSIQHK--N 140 (407)
Q Consensus 84 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------------------~~~~~~~~~e~~~l~~l~h~--n 140 (407)
..+++.||-|--+.||.|..++|..+|||.-+.... ........+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 566789999999999999999999999996532210 01123456899999988654 6
Q ss_pred eeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC
Q 040557 141 LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK 220 (407)
Q Consensus 141 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~ 220 (407)
+.+.+++ +...+||||++|-.|...-. ..-+... ++..|++-+.-+-..| ++|+|+..-||+++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~----~~en~~~---il~~il~~~~~~~~~G---iVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL----DVENPDE---ILDKILEEVRKAYRRG---IVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC----cccCHHH---HHHHHHHHHHHHHHcC---ccccCCchheEEEecC
Confidence 6666654 45589999999966654421 1122222 3333333333333445 9999999999999999
Q ss_pred CceEEecccCccc
Q 040557 221 FQSKIGDFGLARF 233 (407)
Q Consensus 221 ~~~kl~Dfgla~~ 233 (407)
|.+.++||--+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 9999999966553
No 452
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.85 E-value=1.8e-08 Score=98.32 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=95.1
Q ss_pred hcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChh---------------------------------------
Q 040557 81 TKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ--------------------------------------- 121 (407)
Q Consensus 81 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------- 121 (407)
...|.. +.|+.++-|.||+|++++|+.||||+.+..-...
T Consensus 125 F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 125 FSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred HHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 344543 6799999999999999999999999985432110
Q ss_pred hHHHHHHHHHHHHcCC-----CCceeeeeeee-ecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhc
Q 040557 122 GESEFLSEVRMITSIQ-----HKNLVRLLGCC-SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQ 195 (407)
Q Consensus 122 ~~~~~~~e~~~l~~l~-----h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 195 (407)
.+-++.+|...+.++. .+++ ++=..| +-.+...|+|||++|-.+.+...... ...+.........++.- .
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~--~ 279 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFL--R 279 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHH--H
Confidence 0112334444444432 2332 222222 22456789999999998887753333 33554443333222222 2
Q ss_pred cccccCCCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 196 ~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
.+-..| +.|.|.+|.||+++.++.+.+.|||+...++.
T Consensus 280 q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 280 QLLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHhcC---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 222234 99999999999999999999999999987754
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.83 E-value=6.5e-08 Score=82.85 Aligned_cols=139 Identities=17% Similarity=0.132 Sum_probs=103.1
Q ss_pred eeccCCccEEEEEecCCcEEEEEEecccc--C---hhhHHHHHHHHHHHHcCCC--Cceeeeeeeeec----CCeeEEEE
Q 040557 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDK--S---QQGESEFLSEVRMITSIQH--KNLVRLLGCCSD----GSQRLLVY 158 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~----~~~~~lv~ 158 (407)
-|+||-+.|+...+. |..+-+|+-.... + ......|.+|...|.++.. -.+.+++.+... ....+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 467899999998774 5678899864111 1 3356789999999999853 334454422211 12357999
Q ss_pred EeccC-CChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc--eEEecccCcc
Q 040557 159 EYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ--SKIGDFGLAR 232 (407)
Q Consensus 159 e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~--~kl~Dfgla~ 232 (407)
|-+.| -+|.+++....-...+...+..+..+++..+.-||+.+ +.|+|+.+.||+++.++. ++++||--++
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 97764 47888875544445677888899999999999999999 999999999999986666 9999996665
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.81 E-value=2.6e-08 Score=86.87 Aligned_cols=107 Identities=22% Similarity=0.243 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHcCC--CCceeeeeeeeecCC----eeEEEEEeccCC-ChhHHHhccCCCCCCHHHHHHHHHHHHHHhc
Q 040557 123 ESEFLSEVRMITSIQ--HKNLVRLLGCCSDGS----QRLLVYEYMKNR-SLDLLIYGESDKFLNWSTRFQIILGIARGLQ 195 (407)
Q Consensus 123 ~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~----~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 195 (407)
.....+|.+.+..+. .-.+.+.+++..... ..++|+|++++. +|.+++..... .+......++.+++..+.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 446778888888774 344456666665422 348999999884 78888854222 566677889999999999
Q ss_pred cccccCCCceeeeccccccEEEcCCC---ceEEecccCcccc
Q 040557 196 YLHEDSHTRIVHRDIKASNVLLDEKF---QSKIGDFGLARFF 234 (407)
Q Consensus 196 ~LH~~~~~~i~H~dlk~~Nill~~~~---~~kl~Dfgla~~~ 234 (407)
-||..| ++|+|+++.|||++.+. .+.++||+-++..
T Consensus 133 ~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999 99999999999999887 8999999988754
No 455
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.69 E-value=5.7e-09 Score=101.82 Aligned_cols=151 Identities=19% Similarity=0.320 Sum_probs=103.3
Q ss_pred HHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCccccc--------ccccCccccCcccccc
Q 040557 188 LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST--------NFAGTLGYTAPEYAIR 259 (407)
Q Consensus 188 ~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~ 259 (407)
.+++.|+.|+|... .+||++|.|++|.++.++..||+.|+.+........+... -......|.|||++.+
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34559999999854 7999999999999999999999999998765442222111 1124557999999999
Q ss_pred CCCCccccEEehhHHHHHHHhcCCC-CCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHcc
Q 040557 260 GELSEKADIYSFGVLVLEIISCRKN-TDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICL 338 (407)
Q Consensus 260 ~~~~~k~Dv~s~G~vl~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl 338 (407)
...+.++|+||+|+++|.+..|+.+ +........ +... ....+... ..+..+.+.++.+=+.+++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-----~~~~-------~~~~~~~~--~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-----YSFS-------RNLLNAGA--FGYSNNLPSELRESLKKLL 249 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcch-----hhhh-------hccccccc--ccccccCcHHHHHHHHHHh
Confidence 8889999999999999999955543 332211110 0000 00011111 1122345566777888899
Q ss_pred CCCCCCCCCHHHHHHH
Q 040557 339 QPHGNQRPPMSEIVAM 354 (407)
Q Consensus 339 ~~~p~~RPs~~ev~~~ 354 (407)
..++.-||++.++...
T Consensus 250 ~~~~~~rp~~~~l~~~ 265 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLSI 265 (700)
T ss_pred cCCcccCcchhhhhcc
Confidence 9999999988877654
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.60 E-value=7e-07 Score=77.66 Aligned_cols=154 Identities=20% Similarity=0.203 Sum_probs=100.5
Q ss_pred cCHHHHHHHhcCCCCCCeee---ccCCccEEEEEecCCcEEEEEEeccccChhhH-----------------------HH
Q 040557 72 FDFQTLKKATKNFHPGNLLG---RGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE-----------------------SE 125 (407)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~lg---~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~ 125 (407)
.+.+.+.....+..+....| .|--+.||+|...++..+|||++......... .-
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 55666777777777666555 56666899998888999999999644311000 01
Q ss_pred HHHHHHHHHcCC--CCceeeeeeeeecCCeeEEEEEeccCCCh-hHHHhccCCCCCCHHHHHHHHHHHHHHhccccc-cC
Q 040557 126 FLSEVRMITSIQ--HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHE-DS 201 (407)
Q Consensus 126 ~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~ 201 (407)
..+|..-|.++. +-.+.+.+++.. -.|||||+..... .-.| +.-.+.......+..++++.+.-|-. .+
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~L---kDv~~e~~e~~~~~~~~v~~~~~l~~~a~ 187 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRL---KDVPLELEEAEGLYEDVVEYMRRLYKEAG 187 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCc---ccCCcCchhHHHHHHHHHHHHHHHHHhcC
Confidence 235666676663 444455555443 3799999965311 1111 11122333455666777777777665 44
Q ss_pred CCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 202 ~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
+||+||..-|||+. ++.+.++|||-|.....
T Consensus 188 ---LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 188 ---LVHGDLSEYNILVH-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred ---cccccchhhheEEE-CCeEEEEECccccccCC
Confidence 99999999999999 77999999998876543
No 457
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.60 E-value=7e-09 Score=100.20 Aligned_cols=198 Identities=19% Similarity=0.125 Sum_probs=140.2
Q ss_pred cCHHHHHHHhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCc-eeeeeeeeec
Q 040557 72 FDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN-LVRLLGCCSD 150 (407)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~ 150 (407)
|+...++..++.+....-+++|+++.++|.+-.-.+....+.+... ....-++++|.+++||| .+..++-+..
T Consensus 232 ~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~ 305 (829)
T KOG0576|consen 232 FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDG 305 (829)
T ss_pred CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc------hhhHHHHHHHHHccCCCCcccccccCCc
Confidence 3444444445555555668999999999998543444445544211 34456889999999999 7777777777
Q ss_pred CCeeEEEEEeccCC-ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEeccc
Q 040557 151 GSQRLLVYEYMKNR-SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG 229 (407)
Q Consensus 151 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 229 (407)
.+..+++++++.++ +-..... .....+.......+...-+++++++|+.. -+|+| ||+..+ +..+..||+
T Consensus 306 E~~~~i~~~i~s~~rs~~~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~ 376 (829)
T KOG0576|consen 306 EDYLWIPMRICSTGRSSALEMT-VSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFA 376 (829)
T ss_pred ccccchhhhhhcCCccccccCC-hhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-ccccccccc
Confidence 78889999999877 2211110 11111233333445566678899999865 58998 777766 589999999
Q ss_pred CccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHHhcCCCCC
Q 040557 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTD 286 (407)
Q Consensus 230 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~~p~~ 286 (407)
....+.... ......+++.|+|||....+.+..+.|+|+.|+-..++.-|-+|-.
T Consensus 377 v~~~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 377 VPPQLTRTM--KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred CCcccCccc--ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 998776554 2345779999999999999999999999999998888877776654
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.59 E-value=6.9e-07 Score=78.92 Aligned_cols=138 Identities=14% Similarity=0.141 Sum_probs=83.7
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCc--eeeeeeeeecCCeeEEEEEeccCCC
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN--LVRLLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
..||+|..+.||+. .|..+++|...... ......+|.+++..+..-+ +.+.+++..+.+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 46899999999984 24567788775322 2334678999998885433 4677888877778889999999863
Q ss_pred -hhHH---------------------HhccCCCCCCHHHHHH-HHHH----------HHH-Hhcccccc-CCCceeeecc
Q 040557 166 -LDLL---------------------IYGESDKFLNWSTRFQ-IILG----------IAR-GLQYLHED-SHTRIVHRDI 210 (407)
Q Consensus 166 -L~~~---------------------l~~~~~~~l~~~~~~~-i~~~----------i~~-~l~~LH~~-~~~~i~H~dl 210 (407)
+... +|.............. +..+ +.. ...+|... ..+.++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 1111 1111001111111110 0000 000 01111111 1234789999
Q ss_pred ccccEEEcCCCceEEecccCcc
Q 040557 211 KASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 211 k~~Nill~~~~~~kl~Dfgla~ 232 (407)
.|.||++++++ +.|+||+.+.
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcC
Confidence 99999999888 9999998876
No 459
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.57 E-value=6.3e-07 Score=77.11 Aligned_cols=138 Identities=16% Similarity=0.171 Sum_probs=89.1
Q ss_pred HhcCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHH---------HHHHHHHHHcCCC---Cceeeeeee
Q 040557 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESE---------FLSEVRMITSIQH---KNLVRLLGC 147 (407)
Q Consensus 80 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~---------~~~e~~~l~~l~h---~niv~l~~~ 147 (407)
..++|...+++-......|.+-.. +|+.+++|....... ..+.. ..+.+..+.++.. .....++.+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~-r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENR-RPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhh-hHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 346777777777777777777766 578999998754332 11111 1223333333322 222222222
Q ss_pred ee-----cCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCc
Q 040557 148 CS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ 222 (407)
Q Consensus 148 ~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~ 222 (407)
.. -....+++|||++|..|.+... ++. .++..+.+++.-||..| +.|+|.+|+|++++++ .
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~-~ 172 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN-G 172 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-c
Confidence 21 2234568999999988765531 222 24556778899999999 9999999999999966 5
Q ss_pred eEEecccCccc
Q 040557 223 SKIGDFGLARF 233 (407)
Q Consensus 223 ~kl~Dfgla~~ 233 (407)
++++||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999987763
No 460
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.52 E-value=7.6e-07 Score=86.87 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=94.1
Q ss_pred cCCCCCCeeeccCCccEEEEEecCCcEEEEEEeccccChh------------------------------------hHHH
Q 040557 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQ------------------------------------GESE 125 (407)
Q Consensus 82 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 125 (407)
..|.. +.||..+.|.||+|++++|+.||||+.+..-... .+-+
T Consensus 162 ~~f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 162 SEFDE-EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred HhcCc-chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 34442 6799999999999999999999999875432110 0112
Q ss_pred HHHHHHHHHcC----CCCc------eeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhc
Q 040557 126 FLSEVRMITSI----QHKN------LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQ 195 (407)
Q Consensus 126 ~~~e~~~l~~l----~h~n------iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 195 (407)
|.+|.+-..+. .|-+ |.+++-. -.....|+||||+|..+.+.-.-.+. .++...+..-+.+...-+-
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~~~~qI 317 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKR-GISPHDILNKLVEAYLEQI 317 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHHHHHHH
Confidence 44455443333 3444 2233222 23467899999999887666433332 2555544433333322222
Q ss_pred cccccCCCceeeeccccccEEEcC----CCceEEecccCccccCCCC
Q 040557 196 YLHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQ 238 (407)
Q Consensus 196 ~LH~~~~~~i~H~dlk~~Nill~~----~~~~kl~Dfgla~~~~~~~ 238 (407)
+.| | ++|+|=+|.||++.. ++.+.+-|||+........
T Consensus 318 f~~--G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~ 359 (538)
T KOG1235|consen 318 FKT--G---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKT 359 (538)
T ss_pred Hhc--C---CccCCCCCCcEEEecCCCCCccEEEEcccccccccHHH
Confidence 222 3 999999999999983 6789999999998765443
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.40 E-value=5.6e-06 Score=73.49 Aligned_cols=141 Identities=20% Similarity=0.165 Sum_probs=81.5
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCC--ceeeeeeeeec---CCeeEEEEEecc
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK--NLVRLLGCCSD---GSQRLLVYEYMK 162 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~---~~~~~lv~e~~~ 162 (407)
+.|+.|..+.||+....+ ..+++|..... .....+.+|..++..+... .+.+++.+... ....+++|++++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 468999999999999876 68999986432 4455677888888877432 35566664432 334689999999
Q ss_pred CCChhH----------------HH---hcc--CCCCCCHHH---------HHHH------------HHHHHH-Hhccccc
Q 040557 163 NRSLDL----------------LI---YGE--SDKFLNWST---------RFQI------------ILGIAR-GLQYLHE 199 (407)
Q Consensus 163 ~g~L~~----------------~l---~~~--~~~~l~~~~---------~~~i------------~~~i~~-~l~~LH~ 199 (407)
|..+.. .+ +.. ......+.. .... ...+.. .+..+++
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 987766 11 111 011111110 0000 011122 2223322
Q ss_pred ----cCCCceeeeccccccEEEc-CCCceEEecccCcc
Q 040557 200 ----DSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLAR 232 (407)
Q Consensus 200 ----~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfgla~ 232 (407)
.....++|+|+.+.||+++ +++.+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1234599999999999999 66667899998775
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.37 E-value=3.7e-06 Score=75.42 Aligned_cols=138 Identities=14% Similarity=0.089 Sum_probs=83.4
Q ss_pred eeccCC-ccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCceeeeeeeeecCCeeEEEEEeccCCChh
Q 040557 90 LGRGGF-GPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLGCCSDGSQRLLVYEYMKNRSLD 167 (407)
Q Consensus 90 lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 167 (407)
|..|.. ..||+.... +..+.+|...... ...+.+|++++..+. +--+.+++++....+..++|||+++|.++.
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 445555 688999764 4678888764321 234567888888773 445667888877666789999999998775
Q ss_pred HHH-------------------hccCCC--CCC--HHHHHHH-----------------------HHHHHHHhcccc-cc
Q 040557 168 LLI-------------------YGESDK--FLN--WSTRFQI-----------------------ILGIARGLQYLH-ED 200 (407)
Q Consensus 168 ~~l-------------------~~~~~~--~l~--~~~~~~i-----------------------~~~i~~~l~~LH-~~ 200 (407)
... +..... ... ....... ..++...+.... ..
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 431 111000 111 0000000 011111111100 11
Q ss_pred CCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 201 ~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..+.++|+|+.|.|||++++..+.|+||+.+.
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 23459999999999999998778899998775
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.28 E-value=1.1e-05 Score=84.90 Aligned_cols=80 Identities=18% Similarity=0.368 Sum_probs=57.5
Q ss_pred CCeeeccCCccEEEEEecCC---cEEEEEEeccccChhhHHHHHHHHHHHHcCC-CCce--eeeeeeeecC---CeeEEE
Q 040557 87 GNLLGRGGFGPVYRGKLADG---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNL--VRLLGCCSDG---SQRLLV 157 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv 157 (407)
.+.++.|.++.+|+....++ ..+++|+............+.+|.++|+.+. |.++ .+++.+|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 45688899999999876554 4677887643322223346789999999985 6654 7888888764 457899
Q ss_pred EEeccCCCh
Q 040557 158 YEYMKNRSL 166 (407)
Q Consensus 158 ~e~~~~g~L 166 (407)
|||++|..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999988643
No 464
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.23 E-value=4.5e-06 Score=71.31 Aligned_cols=104 Identities=20% Similarity=0.209 Sum_probs=81.4
Q ss_pred HHHHHHHcCCC-CceeeeeeeeecCCeeEEEEEeccCCChhHHHhc-cCCCCCCHHHHHHHHHHHHHHhccccccCCCce
Q 040557 128 SEVRMITSIQH-KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205 (407)
Q Consensus 128 ~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 205 (407)
+|.-+|..+++ +++.+++|+|.. ++|.||...+++...... ..--..+|..+.+|+.++++.+.+|+......+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 57778888865 699999999943 778999987755321000 011236899999999999999999988654459
Q ss_pred eeeccccccEEEcCCCceEEecccCccccC
Q 040557 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP 235 (407)
Q Consensus 206 ~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 235 (407)
...|++++|+-+++++++|++|...+....
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 999999999999999999999998776443
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.16 E-value=1.1e-05 Score=66.44 Aligned_cols=127 Identities=24% Similarity=0.313 Sum_probs=85.8
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceee-eeeeeecCCeeEEEEEeccCCC
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR-LLGCCSDGSQRLLVYEYMKNRS 165 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~~~~lv~e~~~~g~ 165 (407)
.+.|++|.+|.||+|.+. |..+|+|.-..+. ....+..|+++|..+.-.++.+ ++.+..+ .+.|||+.|-.
T Consensus 27 ~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds---~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~ 98 (201)
T COG2112 27 EKELAKGTTSVVYLGEWR-GGEVALKVRRRDS---PRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRP 98 (201)
T ss_pred hhhhhcccccEEEEeecc-CceEEEEEecCCc---chhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcc
Confidence 467999999999999985 6689999865433 3446789999999988776644 4444332 34599999988
Q ss_pred hhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccc-c-ccEEEcCCCceEEecccCcccc
Q 040557 166 LDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIK-A-SNVLLDEKFQSKIGDFGLARFF 234 (407)
Q Consensus 166 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk-~-~Nill~~~~~~kl~Dfgla~~~ 234 (407)
|..+.... +-.. ...+++.-.-|-..| |-|+.|. | .||++.+ ..+.|+||..|+..
T Consensus 99 L~~~~~~~-----~rk~----l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~-~~~~iIDFd~At~k 156 (201)
T COG2112 99 LGKLEIGG-----DRKH----LLRVLEKAYKLDRLG---IEHGELSRPWKNVLVND-RDVYIIDFDSATFK 156 (201)
T ss_pred hhhhhhcc-----cHHH----HHHHHHHHHHHHHhc---cchhhhcCCceeEEecC-CcEEEEEccchhhc
Confidence 87775321 2222 233444433344445 8888885 3 4555554 49999999988743
No 466
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.13 E-value=2.7e-05 Score=66.41 Aligned_cols=138 Identities=24% Similarity=0.335 Sum_probs=96.4
Q ss_pred CcccccccCHHHHHHHhcCCCCCCeeeccCC-ccEEEEEecCCcEEEEEEeccc---cC-------h----------hhH
Q 040557 65 NLRTISYFDFQTLKKATKNFHPGNLLGRGGF-GPVYRGKLADGTLVAVKKLCVD---KS-------Q----------QGE 123 (407)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~---~~-------~----------~~~ 123 (407)
....+..|++. +.+++..+.||.|.- |.||+++. +|+.+|+|.+..- .. . ...
T Consensus 25 ~gPKL~~F~~h-----~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 98 (207)
T PF13095_consen 25 PGPKLEPFTHH-----GDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYA 98 (207)
T ss_pred CCCCcCCcCCC-----CCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhc
Confidence 34445567662 278888899999999 99999999 5889999994221 00 0 122
Q ss_pred HHHHHHHHHHHcCC---CCce--eeeeeeeecC------------------CeeEEEEEeccCCChhHHHhccCCCCCCH
Q 040557 124 SEFLSEVRMITSIQ---HKNL--VRLLGCCSDG------------------SQRLLVYEYMKNRSLDLLIYGESDKFLNW 180 (407)
Q Consensus 124 ~~~~~e~~~l~~l~---h~ni--v~l~~~~~~~------------------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~ 180 (407)
..|..|++...+|+ +.++ ++.+||..-. ..+.||.||++... .+.
T Consensus 99 ~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~- 166 (207)
T PF13095_consen 99 DPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ- 166 (207)
T ss_pred ChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc-
Confidence 46889999888874 4566 8889886211 12357888776532 122
Q ss_pred HHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 181 STRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 181 ~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
.+-+.+|.+-+..+|..+ |+-+|+++.|.. .-+|+|||.+
T Consensus 167 ---~~~~~~~~~dl~~~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 167 ---IRDIPQMLRDLKILHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ---hhHHHHHHHHHHHHHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 233456777788899988 999999999975 4489999864
No 467
>PRK10593 hypothetical protein; Provisional
Probab=98.07 E-value=4.9e-05 Score=70.18 Aligned_cols=76 Identities=8% Similarity=0.086 Sum_probs=55.4
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCC---CceeeeeeeeecC---CeeEEEEEe
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH---KNLVRLLGCCSDG---SQRLLVYEY 160 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~---~~~~lv~e~ 160 (407)
.+.||.|..+.||.....+++ +.+|..+ . ......+..|.+.|+.+.. ..+.+++++|... +..++|||+
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~-~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMAR-S--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEec-c--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 357999999999999876564 6667643 2 1122467899999988842 4678888887543 568999999
Q ss_pred ccCCCh
Q 040557 161 MKNRSL 166 (407)
Q Consensus 161 ~~~g~L 166 (407)
++++++
T Consensus 95 i~G~~~ 100 (297)
T PRK10593 95 LRGVSV 100 (297)
T ss_pred cCCEec
Confidence 998764
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.04 E-value=3.2e-05 Score=68.92 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=44.9
Q ss_pred CeeeccCCc-cEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCC---ceeeeeeeeecC---CeeEEEEEe
Q 040557 88 NLLGRGGFG-PVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK---NLVRLLGCCSDG---SQRLLVYEY 160 (407)
Q Consensus 88 ~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~e~ 160 (407)
+.|+.|+.. .||+. +..+++|.... ......+.+|.+++..+... .+.++++..... ...+++|++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~---~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~ 75 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSA---AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW 75 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCc---cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence 457777776 58875 23467776432 22344678899998877421 334444443332 235889999
Q ss_pred ccCCChh
Q 040557 161 MKNRSLD 167 (407)
Q Consensus 161 ~~~g~L~ 167 (407)
++|.++.
T Consensus 76 i~G~~l~ 82 (235)
T cd05155 76 LEGETAT 82 (235)
T ss_pred ecCCCCC
Confidence 9987763
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.03 E-value=0.00012 Score=62.93 Aligned_cols=129 Identities=19% Similarity=0.273 Sum_probs=87.0
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEecccc---------------ChhhHHHHHHHHHHHHcCC------CCceeeee
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK---------------SQQGESEFLSEVRMITSIQ------HKNLVRLL 145 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~e~~~l~~l~------h~niv~l~ 145 (407)
...||+|+.-.||. ++++....||+..... ......+..+|+.-...+. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 45799999999995 4455667788876544 0112345556665554444 88999999
Q ss_pred eeeecCCeeEEEEEeccC--C----ChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcC
Q 040557 146 GCCSDGSQRLLVYEYMKN--R----SLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDE 219 (407)
Q Consensus 146 ~~~~~~~~~~lv~e~~~~--g----~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~ 219 (407)
|+.+.....-+|+|.+.+ | +|.+++.. ..++. ...+.+.+. ..||-+++ |+.+|++|.||++..
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~~L~~f---~~~l~~~~---Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQALDEF---KRYLLDHH---IVIRDLNPHNIVVQR 153 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHHHHHHH---HHHHHHcC---CeecCCCcccEEEEe
Confidence 999999889999998754 2 46666632 23554 333344433 44555555 999999999999963
Q ss_pred C---C-ceEEec
Q 040557 220 K---F-QSKIGD 227 (407)
Q Consensus 220 ~---~-~~kl~D 227 (407)
+ . .+.|+|
T Consensus 154 ~~~~~~~lvlID 165 (199)
T PF10707_consen 154 RDSGEFRLVLID 165 (199)
T ss_pred cCCCceEEEEEe
Confidence 2 2 577777
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.96 E-value=7.5e-05 Score=66.52 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=47.1
Q ss_pred CeeeccCCccEEEEEecC--CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCc-eeeeeeeeecCCeeEEEEEeccCC
Q 040557 88 NLLGRGGFGPVYRGKLAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN-LVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
+.|..|-...+|+....+ ++.|++|...... .......+|+.++..+...+ ..++++.+.. .++|||++|.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~--~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i~G~ 77 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT--ELIIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFIPGR 77 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCc--cceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEeeCCC
Confidence 457778888999998764 6788899764321 11123347888888874333 3445444332 4799999987
Q ss_pred Ch
Q 040557 165 SL 166 (407)
Q Consensus 165 ~L 166 (407)
++
T Consensus 78 ~l 79 (235)
T cd05157 78 TL 79 (235)
T ss_pred cC
Confidence 65
No 471
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.88 E-value=4.7e-05 Score=79.21 Aligned_cols=197 Identities=19% Similarity=0.194 Sum_probs=135.0
Q ss_pred HHHHHHHHcCCCCceeeeeeeeecCCee----EEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCC
Q 040557 127 LSEVRMITSIQHKNLVRLLGCCSDGSQR----LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202 (407)
Q Consensus 127 ~~e~~~l~~l~h~niv~l~~~~~~~~~~----~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 202 (407)
.-|.+.+.+..|+|++.++.|....... .+..|++..-++...+. .-..++......+..+...|+.|+|+..
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q--~v~~i~~~~~r~~~~~~~~GL~~~h~~~- 306 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ--SVGSIPLETLRILHQKLLEGLAYLHSLS- 306 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh--hccccCHHHHHHHHHHHhhhHHHHHHhc-
Confidence 3456667778999999999887544322 34457777777766663 3345788888899999999999999986
Q ss_pred Cceeeeccccc---cEEEcCCCceEEe--cccCccccCCCCcccccccccCccccCccccccCCCCc--cccEEehhHHH
Q 040557 203 TRIVHRDIKAS---NVLLDEKFQSKIG--DFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSE--KADIYSFGVLV 275 (407)
Q Consensus 203 ~~i~H~dlk~~---Nill~~~~~~kl~--Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--k~Dv~s~G~vl 275 (407)
..|.-+..+ +.-.+..+.+..+ ||+.+..+....... ...-+..|.++|......++. ..|+|++|..+
T Consensus 307 --l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~ 382 (1351)
T KOG1035|consen 307 --LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL 382 (1351)
T ss_pred --cceeEEecccccccccCccceeecchhhhcccccCCCcccch--hhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence 666666555 5555666677777 998888776544322 123455678888777666544 47999999999
Q ss_pred HHHHhcCCCCCCCCCcccCchhHHHHHHHHhCccccccCcccccCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 040557 276 LEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355 (407)
Q Consensus 276 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ev~~~l 355 (407)
..+..|..+...... .. ..++.. ....+.+....|+..++++|++..+++.+.
T Consensus 383 ~~~~~~~~i~~~~~~---------~~---------~~l~~~---------~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 383 LQLSQGEDISEKSAV---------PV---------SLLDVL---------STSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred hhhhhcCcccccccc---------hh---------hhhccc---------cchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 999988754321100 00 000000 111456778889999999999999999886
Q ss_pred hc
Q 040557 356 TC 357 (407)
Q Consensus 356 ~~ 357 (407)
-.
T Consensus 436 f~ 437 (1351)
T KOG1035|consen 436 FL 437 (1351)
T ss_pred hc
Confidence 43
No 472
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.74 E-value=0.0002 Score=66.25 Aligned_cols=140 Identities=15% Similarity=0.125 Sum_probs=80.8
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCC--ceeeeeee------eecCCeeEEEEE
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK--NLVRLLGC------CSDGSQRLLVYE 159 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~------~~~~~~~~lv~e 159 (407)
+.+..|....+|+.... +..+++|.... ........|++++..+.+. .+.+++.. ....+..++|++
T Consensus 20 ~~i~~G~~n~~y~v~~~-~~~~vLr~~~~----~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 20 EGISAGIENTNYFVTTD-SGRYVLTLFEK----VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred ecccCccccceEEEEeC-CCcEEEEEcCC----CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 45677777899998764 44688898743 2233456777777777432 24444432 123345689999
Q ss_pred eccCCChhH----H----------HhccC----C-----CCCCHHHHH----------HHHHHHHHHhccccc----cCC
Q 040557 160 YMKNRSLDL----L----------IYGES----D-----KFLNWSTRF----------QIILGIARGLQYLHE----DSH 202 (407)
Q Consensus 160 ~~~~g~L~~----~----------l~~~~----~-----~~l~~~~~~----------~i~~~i~~~l~~LH~----~~~ 202 (407)
|++|..+.. . +|... . ....|.... .....+..++.++.. ...
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 999876522 0 11100 0 111222111 001112223333332 112
Q ss_pred CceeeeccccccEEEcCCCceEEecccCcc
Q 040557 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 203 ~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
..++|+|+.|.||++++++.+.|+||+.+.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 349999999999999998777899998775
No 473
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.74 E-value=4e-05 Score=69.30 Aligned_cols=148 Identities=14% Similarity=0.178 Sum_probs=100.1
Q ss_pred cccCHHHHHHHhcC---CCCCCeeeccCCccEEEEEecCCcEEEEEEeccccC-------------------h--hhHHH
Q 040557 70 SYFDFQTLKKATKN---FHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKS-------------------Q--QGESE 125 (407)
Q Consensus 70 ~~~~~~~~~~~~~~---~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------------~--~~~~~ 125 (407)
.-++|-.++...++ +..++.||-|--+.||.+...+|...++|.-..... . ...-.
T Consensus 77 ~GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRla 156 (465)
T KOG2268|consen 77 AGYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLA 156 (465)
T ss_pred ccchHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHH
Confidence 34777777776654 678999999999999999998999999885422110 0 01123
Q ss_pred HHHHHHHHHcCC-C-CceeeeeeeeecCCeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCC
Q 040557 126 FLSEVRMITSIQ-H-KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203 (407)
Q Consensus 126 ~~~e~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 203 (407)
..+|...|+.+. | --+.+.+++ +..++|||++.+-.|...-+. .+..++..- +..-+.-|-.+|
T Consensus 157 a~kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v-----~d~~~ly~~---lm~~Iv~la~~G-- 222 (465)
T KOG2268|consen 157 ATKEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHV-----EDPPTLYDD---LMGLIVRLANHG-- 222 (465)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeeec-----CChHHHHHH---HHHHHHHHHHcC--
Confidence 456777777773 2 233444443 456899999998877655322 233333332 333334455556
Q ss_pred ceeeeccccccEEEcCCCceEEecccCcc
Q 040557 204 RIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 204 ~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
+||+|..-=||++++++.++++||--..
T Consensus 223 -lIHgDFNEFNimv~dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 223 -LIHGDFNEFNIMVKDDDKIVVIDFPQMV 250 (465)
T ss_pred -ceecccchheeEEecCCCEEEeechHhh
Confidence 9999999999999999999999996544
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.74 E-value=0.00018 Score=65.08 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=76.6
Q ss_pred eeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCce-eeeeeeeecCCeeEEEEEeccCCChh
Q 040557 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL-VRLLGCCSDGSQRLLVYEYMKNRSLD 167 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~L~ 167 (407)
.+..|-.+.+|+... +|+.+++|.......... ....+|.+++..+...++ .++++... -++||||++|..+.
T Consensus 3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALG-VDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT 76 (256)
T ss_pred cCCCcCcCCeEEEEe-CCccEEEeeCCccccccc-CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence 355677889998874 577888887532211110 134678888888754333 33444432 36899999987653
Q ss_pred HH-----------------HhccC--CCCCCHHHH-HHHH------------HHHHHHhccc--cccCCCceeeeccccc
Q 040557 168 LL-----------------IYGES--DKFLNWSTR-FQII------------LGIARGLQYL--HEDSHTRIVHRDIKAS 213 (407)
Q Consensus 168 ~~-----------------l~~~~--~~~l~~~~~-~~i~------------~~i~~~l~~L--H~~~~~~i~H~dlk~~ 213 (407)
.. +|... ...++.... ..+. ..+...+... .......++|+|+.+.
T Consensus 77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 21 11111 111222111 1111 1111111111 0011234899999999
Q ss_pred cEEEcCCCceEEecccCccc
Q 040557 214 NVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 214 Nill~~~~~~kl~Dfgla~~ 233 (407)
||++++++ +.|+||..+..
T Consensus 157 Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 157 NLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cEEEeCCC-CEEEeccccCc
Confidence 99999876 78999987763
No 475
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.71 E-value=0.00036 Score=66.56 Aligned_cols=76 Identities=17% Similarity=0.164 Sum_probs=53.7
Q ss_pred CeeeccCCccEEEEEecCC-cEEEEEEeccc-----cC-hhhHHHHHHHHHHHHcCC---CCceeeeeeeeecCCeeEEE
Q 040557 88 NLLGRGGFGPVYRGKLADG-TLVAVKKLCVD-----KS-QQGESEFLSEVRMITSIQ---HKNLVRLLGCCSDGSQRLLV 157 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~-----~~-~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv 157 (407)
+.||.|.+..||++...+| +.++||.-... .. .....++..|.+.|..+. ..++.+++.+ +....++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 5689999999999998777 48999985311 11 223456777888888762 2456677766 44567899
Q ss_pred EEeccCCC
Q 040557 158 YEYMKNRS 165 (407)
Q Consensus 158 ~e~~~~g~ 165 (407)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.66 E-value=0.0016 Score=60.93 Aligned_cols=155 Identities=11% Similarity=0.098 Sum_probs=80.0
Q ss_pred CHHHHHHHhcCCCC-----CCeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCC--Cceeeee
Q 040557 73 DFQTLKKATKNFHP-----GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH--KNLVRLL 145 (407)
Q Consensus 73 ~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~ 145 (407)
+.+++......|.+ .+.++.|....+|.....+| .+++|++. .... ..+..|..++..+.. -.+.+++
T Consensus 8 s~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~-~~~~---~~l~~~~~~l~~L~~~glpvP~~i 82 (319)
T PRK05231 8 SDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFE-RLTA---EDLPFFLGLMQHLAARGVPVPAPV 82 (319)
T ss_pred CHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEec-cCCh---HHhHHHHHHHHHHHHCCCCCCcce
Confidence 34444444445544 23466677789999887655 68889874 2222 222334444444421 1233333
Q ss_pred e------eeecCCeeEEEEEeccCCChh-----------HH---HhccCC---------CCCCH-HHHHH----------
Q 040557 146 G------CCSDGSQRLLVYEYMKNRSLD-----------LL---IYGESD---------KFLNW-STRFQ---------- 185 (407)
Q Consensus 146 ~------~~~~~~~~~lv~e~~~~g~L~-----------~~---l~~~~~---------~~l~~-~~~~~---------- 185 (407)
. +....+..++++||++|..+. .. +|.... ..+.| .....
T Consensus 83 ~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (319)
T PRK05231 83 ARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQ 162 (319)
T ss_pred eCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhH
Confidence 2 112345678999999987441 11 111100 01111 11110
Q ss_pred --HHHH-HHHHhcccccc----CCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 186 --IILG-IARGLQYLHED----SHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 186 --i~~~-i~~~l~~LH~~----~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
...+ +...+..+... -..+++|+|+.+.||+++++...-|+||+.+.
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 163 AALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1111 11122222211 12349999999999999977556899999886
No 477
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.63 E-value=0.00056 Score=62.94 Aligned_cols=139 Identities=17% Similarity=0.280 Sum_probs=79.5
Q ss_pred ccEEEEEecCCcEEEEEEecc-ccChhhHHHHHHHHHHHHcCC--CCceeeeeeeeecCC--eeEEEEEeccCCChhHHH
Q 040557 96 GPVYRGKLADGTLVAVKKLCV-DKSQQGESEFLSEVRMITSIQ--HKNLVRLLGCCSDGS--QRLLVYEYMKNRSLDLLI 170 (407)
Q Consensus 96 g~Vy~~~~~~~~~vavK~~~~-~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~--~~~lv~e~~~~g~L~~~l 170 (407)
-.+|..... ++.+++. ... ...........+|.++|+.+. -.-+...+++|.++. ..+.||+|++|..+...+
T Consensus 39 n~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~ 116 (321)
T COG3173 39 NDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSAL 116 (321)
T ss_pred cceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcC
Confidence 344544443 7778888 321 223344455667888888763 334556778887766 679999999884332111
Q ss_pred hccC------------------------------------CCCCCHHHHHHHHH--------HHHHHhccccc-----cC
Q 040557 171 YGES------------------------------------DKFLNWSTRFQIIL--------GIARGLQYLHE-----DS 201 (407)
Q Consensus 171 ~~~~------------------------------------~~~l~~~~~~~i~~--------~i~~~l~~LH~-----~~ 201 (407)
.... ++.-.|...++.+. ....-..+|+. .+
T Consensus 117 ~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~ 196 (321)
T COG3173 117 PPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAG 196 (321)
T ss_pred CcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCC
Confidence 0000 00001111111000 01111222222 23
Q ss_pred CCceeeeccccccEEEcCCCceEEecccCccccCC
Q 040557 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236 (407)
Q Consensus 202 ~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 236 (407)
.+.++|+|+++.|++++.+..+-|.||+++..-+.
T Consensus 197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred CceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 35699999999999999998899999999986543
No 478
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.55 E-value=0.00042 Score=64.26 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=46.7
Q ss_pred eeeccCCccEEEEEecC-------CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCce-eeeeeeeecCCeeEEEEEe
Q 040557 89 LLGRGGFGPVYRGKLAD-------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL-VRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~ 160 (407)
.+..|-...+|+....+ ++.+++|...... .......+|.+++..+...++ .++++++.+ ..|+||
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV--ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC--cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 45667777899988654 5789999864322 222345678888887743333 345555532 358999
Q ss_pred ccCCChh
Q 040557 161 MKNRSLD 167 (407)
Q Consensus 161 ~~~g~L~ 167 (407)
++|..+.
T Consensus 79 i~G~~l~ 85 (302)
T cd05156 79 IPSRTLT 85 (302)
T ss_pred eCCCcCC
Confidence 9887663
No 479
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.46 E-value=0.0046 Score=57.47 Aligned_cols=155 Identities=14% Similarity=0.168 Sum_probs=84.2
Q ss_pred HHHHHHHhcCCCCC-----CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCC--ceeeeee
Q 040557 74 FQTLKKATKNFHPG-----NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK--NLVRLLG 146 (407)
Q Consensus 74 ~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~ 146 (407)
.+.+......|.+. +.++.|....+|+....+| .+++|....... ...+..|.+++..|... .+.+++.
T Consensus 9 ~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~---~~~i~~e~~~l~~L~~~g~pvp~~i~ 84 (307)
T TIGR00938 9 DEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRVK---AEELPFFLALTTHLAARGLPVPKPVK 84 (307)
T ss_pred HHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCC-cEEEEEecCCCC---HHHHHHHHHHHHHHHHCCCCCCcccc
Confidence 34454444455442 3466677789999876555 577887643222 22344566666666322 2344443
Q ss_pred ee------ecCCeeEEEEEeccCCChhH-----------H---HhccCCC----------CCCHHHHHH-----------
Q 040557 147 CC------SDGSQRLLVYEYMKNRSLDL-----------L---IYGESDK----------FLNWSTRFQ----------- 185 (407)
Q Consensus 147 ~~------~~~~~~~lv~e~~~~g~L~~-----------~---l~~~~~~----------~l~~~~~~~----------- 185 (407)
.. ...+..++++||++|..+.. . +|..... .-.|.....
T Consensus 85 t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~ 164 (307)
T TIGR00938 85 SRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEA 164 (307)
T ss_pred CCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCH
Confidence 21 22456789999998854320 0 1111000 011111100
Q ss_pred -HHHHHHHHhccccc----cCCCceeeeccccccEEEcCCCceEEecccCcc
Q 040557 186 -IILGIARGLQYLHE----DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 186 -i~~~i~~~l~~LH~----~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
....+...++++.. .....++|+|+++.||++++++.+.|+||+.+.
T Consensus 165 ~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 165 HMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 01112233444422 112459999999999999998777899998875
No 480
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.21 E-value=0.0028 Score=57.95 Aligned_cols=72 Identities=17% Similarity=0.284 Sum_probs=46.3
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC---CCCceeeeeeeeecCCeeEEEEEeccCC
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI---QHKNLVRLLGCCSDGSQRLLVYEYMKNR 164 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~g 164 (407)
+.++.|....+|+.. .+++.+.||.-. ......|..|.+-|+.| .-..+.+++++....+..+||+||++.+
T Consensus 23 ~~v~GG~i~~a~~~~-~~~~~~FvK~~~----~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 23 EPVSGGDINEAYRLD-TDGGSYFVKVNS----ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEE--SSSSEEEEEE-TTS-EEEEEEEE----GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred EecCCCChhheEEEE-CCCccEEEEecC----hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 468888889999888 568889999764 22334577888887777 3456778888887777789999999876
No 481
>PLN02236 choline kinase
Probab=97.07 E-value=0.0044 Score=58.50 Aligned_cols=139 Identities=21% Similarity=0.264 Sum_probs=78.7
Q ss_pred eeeccCCccEEEEEecC-----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCce-eeeeeeeecCCeeEEEEEecc
Q 040557 89 LLGRGGFGPVYRGKLAD-----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL-VRLLGCCSDGSQRLLVYEYMK 162 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~ 162 (407)
.|..|-.-.+|+....+ ++.|++|...... ...-.-.+|..++..+...++ .++++++..+ .|+||++
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~ 116 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH 116 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--CeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence 35457777889887532 3678888774322 222223578888888754444 3556665433 5899998
Q ss_pred CCChhHH-----------------HhccC----CCCCCHHHHHHHHHHHH-----------------HHhc----cccc-
Q 040557 163 NRSLDLL-----------------IYGES----DKFLNWSTRFQIILGIA-----------------RGLQ----YLHE- 199 (407)
Q Consensus 163 ~g~L~~~-----------------l~~~~----~~~l~~~~~~~i~~~i~-----------------~~l~----~LH~- 199 (407)
+.++... +|... .....+....++..++. ..+. .+..
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 7666321 11111 01122333333322211 1111 1121
Q ss_pred cCCCceeeeccccccEEEcC-CCceEEecccCccc
Q 040557 200 DSHTRIVHRDIKASNVLLDE-KFQSKIGDFGLARF 233 (407)
Q Consensus 200 ~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~ 233 (407)
.....++|+|+++.|||+++ ++.+.++||..+..
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 11234899999999999986 46899999987753
No 482
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.07 E-value=0.0051 Score=56.13 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=26.3
Q ss_pred CceeeeccccccEEEcCCCc-eEEecccCcccc
Q 040557 203 TRIVHRDIKASNVLLDEKFQ-SKIGDFGLARFF 234 (407)
Q Consensus 203 ~~i~H~dlk~~Nill~~~~~-~kl~Dfgla~~~ 234 (407)
+.++|+|+++.||++++++. .-|+||+.+..-
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 34999999999999997555 469999988643
No 483
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.97 E-value=0.00011 Score=78.59 Aligned_cols=159 Identities=11% Similarity=-0.005 Sum_probs=113.3
Q ss_pred HHHHHHHHHcCCCCceeeeeeeee--cCCeeEEEEEeccCCChhHHHhccCC--CCCCHHHHHHHHHHHHHHhccccccC
Q 040557 126 FLSEVRMITSIQHKNLVRLLGCCS--DGSQRLLVYEYMKNRSLDLLIYGESD--KFLNWSTRFQIILGIARGLQYLHEDS 201 (407)
Q Consensus 126 ~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~ 201 (407)
...|...++...|+++.....-.. .....+.+++|+.+|.+...+-.... ..++.......-.+...+..-+|+..
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 345555566678888876554332 23456889999999999888865432 23333333333333355555555543
Q ss_pred --CCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccccCccccCccccccCCCCccccEEehhHHHHHHH
Q 040557 202 --HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279 (407)
Q Consensus 202 --~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~s~G~vl~el~ 279 (407)
....+|+++|+-|.++..+.++++.++|+.+...+.... .....+++.|+.|+....-.++.++|+|..|+-+|++.
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf-~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs 1434 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF-FGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRS 1434 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchHhh-hhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 234899999999999999999999999999954443332 23456788899999888888999999999999999998
Q ss_pred hcCCCC
Q 040557 280 SCRKNT 285 (407)
Q Consensus 280 tg~~p~ 285 (407)
.|..++
T Consensus 1435 ~~n~~f 1440 (2724)
T KOG1826|consen 1435 DGNAYF 1440 (2724)
T ss_pred cccHHH
Confidence 877654
No 484
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.92 E-value=0.0088 Score=55.50 Aligned_cols=141 Identities=19% Similarity=0.204 Sum_probs=92.3
Q ss_pred CCeeeccCCccEEEEEecCCcEEEEEEecccc----Ch----hhH----------------H-HHHHHHHHHHcCCCCce
Q 040557 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK----SQ----QGE----------------S-EFLSEVRMITSIQHKNL 141 (407)
Q Consensus 87 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~----~~~----------------~-~~~~e~~~l~~l~h~ni 141 (407)
...|..|--+.||-+...+|..+|||+++.+. .. .++ . -...|++-|.+++...|
T Consensus 149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI 228 (520)
T KOG2270|consen 149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI 228 (520)
T ss_pred ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34678899999999999899999999885431 00 000 0 12357777777765443
Q ss_pred eeeeeeeecCCeeEEEEEeccCCCh-hHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCC
Q 040557 142 VRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEK 220 (407)
Q Consensus 142 v~l~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~ 220 (407)
.-.--+.. ....|||+|+....- .-.| +...++...+...-.+++.-|.-|.+.+ ++||.||.--|+|+-++
T Consensus 229 P~PePIlL--k~hVLVM~FlGrdgw~aPkL---Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~LyhdG 301 (520)
T KOG2270|consen 229 PCPEPILL--KNHVLVMEFLGRDGWAAPKL---KDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYHDG 301 (520)
T ss_pred CCCCceee--ecceEeeeeccCCCCcCccc---ccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEECC
Confidence 21111111 123789999953211 1111 2334666677777778888888777655 59999999999999765
Q ss_pred CceEEecccCccccC
Q 040557 221 FQSKIGDFGLARFFP 235 (407)
Q Consensus 221 ~~~kl~Dfgla~~~~ 235 (407)
.+.++|.+-+....
T Consensus 302 -~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 302 -KLYIIDVSQSVEHD 315 (520)
T ss_pred -EEEEEEccccccCC
Confidence 89999988776543
No 485
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.74 E-value=0.038 Score=52.81 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=49.2
Q ss_pred CeeeccCCccEEEEEecCCcEEEEEEeccccC------hhhHHHHHHHHHHHHcCC---CCceeeeeeeeecCCeeEEEE
Q 040557 88 NLLGRGGFGPVYRGKLADGTLVAVKKLCVDKS------QQGESEFLSEVRMITSIQ---HKNLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 158 (407)
+.||.|....||+.... +..++||+-..... .....+-..|.+.|..+. ..++.+++.++. +..+++|
T Consensus 38 ~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlvM 114 (418)
T PLN02756 38 KEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIGM 114 (418)
T ss_pred EEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEEE
Confidence 56899999999998874 56789997642110 012333445566666553 357788888876 4467889
Q ss_pred EeccC
Q 040557 159 EYMKN 163 (407)
Q Consensus 159 e~~~~ 163 (407)
|++++
T Consensus 115 E~L~~ 119 (418)
T PLN02756 115 RYLEP 119 (418)
T ss_pred eecCC
Confidence 99977
No 486
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.60 E-value=0.0097 Score=51.31 Aligned_cols=153 Identities=16% Similarity=0.163 Sum_probs=89.0
Q ss_pred cCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeecCCeeEEEEEeccCCChhHHHhc
Q 040557 93 GGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYG 172 (407)
Q Consensus 93 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 172 (407)
|+.++.-+++.+- ....+|++......-...-|.++.++++++. .|+++..- +...+-++.|+|.....
T Consensus 73 ~gNsTl~~~kt~i-G~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------ 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-GPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------ 141 (308)
T ss_pred CCceEEEEecccc-chhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------
Confidence 3334444444322 2345666654333334456778888888764 46666622 34456788998854211
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCccccCCCCcccccccccCcccc
Q 040557 173 ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252 (407)
Q Consensus 173 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~ 252 (407)
.. .-.|..+ +.+|.-.|+.. ...+|+|-.|+|||-|..|.+||.|=+.... . +-.|.
T Consensus 142 -----~~---~N~i~ag-i~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~--~-----------~V~~v 198 (308)
T PF07387_consen 142 -----NF---SNFITAG-IKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE--N-----------QVNMV 198 (308)
T ss_pred -----ch---hHHHHHh-HHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhhhhh--h-----------eeeEE
Confidence 11 1112221 35677788653 4699999999999999999999999665431 0 00111
Q ss_pred CccccccCCCCccccEEehhHHHHHHHhcC
Q 040557 253 APEYAIRGELSEKADIYSFGVLVLEIISCR 282 (407)
Q Consensus 253 aPE~~~~~~~~~k~Dv~s~G~vl~el~tg~ 282 (407)
--| -...|.++.+-+|=.-+++++...
T Consensus 199 N~~---Y~~lT~~aE~~~fv~s~l~~v~~~ 225 (308)
T PF07387_consen 199 NIE---YESLTQEAEVKVFVKSCLKLVEKQ 225 (308)
T ss_pred eee---ccccChHHHHHHHHHHHHHHHHHH
Confidence 111 123466777777777777776543
No 487
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.57 E-value=0.02 Score=53.22 Aligned_cols=30 Identities=30% Similarity=0.372 Sum_probs=27.3
Q ss_pred ceeeeccccccEEEcCCCceEEecccCccc
Q 040557 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARF 233 (407)
Q Consensus 204 ~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 233 (407)
.++|+|+.++|+++++++.+.++||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 599999999999999999999999987763
No 488
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.55 E-value=0.0077 Score=52.61 Aligned_cols=29 Identities=28% Similarity=0.475 Sum_probs=20.7
Q ss_pred ceeeeccccccEEE-cCCCceEEecccCcc
Q 040557 204 RIVHRDIKASNVLL-DEKFQSKIGDFGLAR 232 (407)
Q Consensus 204 ~i~H~dlk~~Nill-~~~~~~kl~Dfgla~ 232 (407)
.++|+|+.+.||++ +.++.++++||..+.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 48999999999999 888999999998775
No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.51 E-value=0.029 Score=52.12 Aligned_cols=29 Identities=24% Similarity=0.378 Sum_probs=25.3
Q ss_pred CceeeeccccccEEEcCCCceEEecccCcc
Q 040557 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232 (407)
Q Consensus 203 ~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 232 (407)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 45899999999999998 578999998765
No 490
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.41 E-value=0.034 Score=52.17 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=47.3
Q ss_pred eeeccCCccEEEEEecCC-cEEEEEEeccc------cChhhHHHHHHHHHHHHcCC--CC-ceeeeeeeeecCCeeEEEE
Q 040557 89 LLGRGGFGPVYRGKLADG-TLVAVKKLCVD------KSQQGESEFLSEVRMITSIQ--HK-NLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~------~~~~~~~~~~~e~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~ 158 (407)
.||-|....||++..++| +.|+||.-... .......+..-|.+.|.... .| .+.+++.+ +.....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 478899999999997654 68999975311 11233445566777776652 34 34445443 555667999
Q ss_pred EeccC
Q 040557 159 EYMKN 163 (407)
Q Consensus 159 e~~~~ 163 (407)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 99855
No 491
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.17 E-value=0.034 Score=52.20 Aligned_cols=138 Identities=15% Similarity=0.224 Sum_probs=76.2
Q ss_pred eeeccCCccEEEEEecC----CcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCce-eeeeeeeecCCeeEEEEEeccC
Q 040557 89 LLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL-VRLLGCCSDGSQRLLVYEYMKN 163 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 163 (407)
.|..|=...+|+....+ +..|++|....... ..-.-.+|..++..+..-++ .++++++..+ +|.+|+++
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~--~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi~g 94 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD--YVIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFINA 94 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcC--eEechHHHHHHHHHHHhcCCCCceeEEeCCc----EeehhhcC
Confidence 45446667788886543 23788887643221 22233578888888865444 3556555322 58999977
Q ss_pred CChhHH-----------------HhccC----CCCCCHHHHHHHHHHHH-------------------------HHh-cc
Q 040557 164 RSLDLL-----------------IYGES----DKFLNWSTRFQIILGIA-------------------------RGL-QY 196 (407)
Q Consensus 164 g~L~~~-----------------l~~~~----~~~l~~~~~~~i~~~i~-------------------------~~l-~~ 196 (407)
..+..- +|... ..+--|....++..++. ..+ ..
T Consensus 95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 174 (330)
T PLN02421 95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI 174 (330)
T ss_pred CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence 655210 11111 01112333322222211 111 11
Q ss_pred ccccC-CCceeeeccccccEEEcC-CCceEEecccCcc
Q 040557 197 LHEDS-HTRIVHRDIKASNVLLDE-KFQSKIGDFGLAR 232 (407)
Q Consensus 197 LH~~~-~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~ 232 (407)
+...+ ..-++|+|+.+.||++++ ++.++++||..|.
T Consensus 175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 21111 224899999999999974 5789999998775
No 492
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.16 E-value=0.12 Score=48.28 Aligned_cols=138 Identities=23% Similarity=0.328 Sum_probs=76.6
Q ss_pred eeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCc------eeeeee----eeecCCeeEEEEE
Q 040557 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN------LVRLLG----CCSDGSQRLLVYE 159 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~----~~~~~~~~~lv~e 159 (407)
|.+ .-..+|+....+|+. ++|..... ....++..|...|..+.-.+ +..+=| ....+....-+++
T Consensus 34 l~s-~eN~~f~~~~~~g~~-iLki~~~~---~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~ 108 (331)
T COG2334 34 LNS-EENSNFRVQTEDGRY-ILKIYRPG---WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE 108 (331)
T ss_pred ccc-ccCceEEEEecCCCe-EEEEecCC---CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence 444 557899998877776 88877543 23334556666666552111 122212 1222236778999
Q ss_pred eccCCChhH-H--------------Hhc--cC--------CCCCCHHH---H----------HHHHHHHHHHhccccc--
Q 040557 160 YMKNRSLDL-L--------------IYG--ES--------DKFLNWST---R----------FQIILGIARGLQYLHE-- 199 (407)
Q Consensus 160 ~~~~g~L~~-~--------------l~~--~~--------~~~l~~~~---~----------~~i~~~i~~~l~~LH~-- 199 (407)
|++|..+.. . +|. .. .....|.. . .....++...+..+.+
T Consensus 109 ~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~ 188 (331)
T COG2334 109 YLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARL 188 (331)
T ss_pred ecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhc
Confidence 999987762 1 010 00 01223331 0 0112222223332222
Q ss_pred --cCC---CceeeeccccccEEEcCCCc-eEEecccCcc
Q 040557 200 --DSH---TRIVHRDIKASNVLLDEKFQ-SKIGDFGLAR 232 (407)
Q Consensus 200 --~~~---~~i~H~dlk~~Nill~~~~~-~kl~Dfgla~ 232 (407)
.-. ..+||+|+.+.||+++.+.. +-++|||-+.
T Consensus 189 ~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 189 PAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 111 12899999999999998875 8999998775
No 493
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.11 E-value=0.014 Score=54.05 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=56.3
Q ss_pred CeeEEEEEeccCCChhHHHhccCCCCCCHHHHHHHHHHHHHHhccccccCCCceeeeccccccEEEcCCCceEEecccCc
Q 040557 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231 (407)
Q Consensus 152 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 231 (407)
...|++|++. |+++. ..+.-.+.+...++.+.+..+.-+..+ .+.-|||+.-.||||+ +|++.|+||-++
T Consensus 299 ~y~yl~~kdh-gt~is------~ik~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfkls 368 (488)
T COG5072 299 LYLYLHFKDH-GTPIS------IIKADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFKLS 368 (488)
T ss_pred eEEEEEEecC-Cceee------eeecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEeeee
Confidence 3456777765 44442 223457888899999988888877764 4699999999999999 889999999999
Q ss_pred cc
Q 040557 232 RF 233 (407)
Q Consensus 232 ~~ 233 (407)
+.
T Consensus 369 Rl 370 (488)
T COG5072 369 RL 370 (488)
T ss_pred ec
Confidence 84
No 494
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.98 E-value=0.27 Score=46.09 Aligned_cols=93 Identities=16% Similarity=0.126 Sum_probs=52.9
Q ss_pred cCHHHHHHHhcCCCCC---C-eeeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcCCC--Cceeeee
Q 040557 72 FDFQTLKKATKNFHPG---N-LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH--KNLVRLL 145 (407)
Q Consensus 72 ~~~~~~~~~~~~~~~~---~-~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~ 145 (407)
++.+.+..+...+-+. + ..-.+.-..||+....+|..+++|...... .....+..|.+.+..+.. -.++...
T Consensus 11 l~p~~~~~a~~~~g~~~~~~~~~l~s~eN~vy~v~~~~~~~~vlKv~r~~~--~~~~~i~~E~~~l~~L~~~gipv~~p~ 88 (325)
T PRK11768 11 LTPDLILDALESLGLRVDGRLLALNSYENRVYQFGDEDGRRVVAKFYRPER--WSDAQILEEHAFALELAEAEIPVVAPL 88 (325)
T ss_pred CChHHHHHHHHHcCCCCccceEeeccccceEEEEecCCCCEEEEEEcCccc--CCHHHHHHHHHHHHHHHHCCCCCCCCc
Confidence 5566666655554331 1 122345578999988788889999874222 233455667777665532 1122211
Q ss_pred ---e--eeecCCeeEEEEEeccCCCh
Q 040557 146 ---G--CCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 146 ---~--~~~~~~~~~lv~e~~~~g~L 166 (407)
| ....++..+.++++++|...
T Consensus 89 ~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 89 AFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred cCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 1 12224567889999987643
No 495
>PRK06148 hypothetical protein; Provisional
Probab=95.93 E-value=0.1 Score=56.57 Aligned_cols=30 Identities=30% Similarity=0.474 Sum_probs=25.4
Q ss_pred ceeeeccccccEEEcCCC--ceE-EecccCccc
Q 040557 204 RIVHRDIKASNVLLDEKF--QSK-IGDFGLARF 233 (407)
Q Consensus 204 ~i~H~dlk~~Nill~~~~--~~k-l~Dfgla~~ 233 (407)
.+||+|+++.||+++.+. .+. |+|||-+..
T Consensus 204 ~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 204 QVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred ceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 399999999999999775 454 999998863
No 496
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.88 E-value=0.08 Score=46.12 Aligned_cols=73 Identities=18% Similarity=0.246 Sum_probs=49.6
Q ss_pred eeccCCccEEEEEecCCcEEEEEEeccccChhhHHHHHHHHHHHHcC---CCCceeeeeeeeecCCeeEEEEEeccCCCh
Q 040557 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI---QHKNLVRLLGCCSDGSQRLLVYEYMKNRSL 166 (407)
Q Consensus 90 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 166 (407)
+.-|.--..|.... +...+.||+- .......|..|+.-|..+ +..++.+++.+-.+.++.|+|+||++-|.+
T Consensus 24 v~gG~inea~~v~d-g~~~~FvK~n----~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~ 98 (286)
T COG3001 24 VSGGDINEAWRLRD-GTDPFFVKCN----QREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL 98 (286)
T ss_pred cCCccccceeEeec-CCcceEEEec----chhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence 44444334444443 3567888853 334445677887776666 446788889888899999999999998766
Q ss_pred h
Q 040557 167 D 167 (407)
Q Consensus 167 ~ 167 (407)
.
T Consensus 99 d 99 (286)
T COG3001 99 D 99 (286)
T ss_pred C
Confidence 4
No 497
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.51 E-value=0.071 Score=50.72 Aligned_cols=74 Identities=15% Similarity=0.110 Sum_probs=49.1
Q ss_pred CeeeccCCccEEEEEecC-CcEEEEEEeccc-----cChhhHHHHHHHHHHHHcCC--CC-ceeeeeeeeecCCeeEEEE
Q 040557 88 NLLGRGGFGPVYRGKLAD-GTLVAVKKLCVD-----KSQQGESEFLSEVRMITSIQ--HK-NLVRLLGCCSDGSQRLLVY 158 (407)
Q Consensus 88 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~~e~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~ 158 (407)
+.||-|.-..||++...+ ++.|+||.-... .-.....+..-|.+.|+... .| .+.+++.+ +.....+||
T Consensus 35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~vM 112 (409)
T PRK12396 35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCVM 112 (409)
T ss_pred eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHHH
Confidence 578999999999999743 568999975311 11234456667778877663 34 34455544 555667889
Q ss_pred EeccC
Q 040557 159 EYMKN 163 (407)
Q Consensus 159 e~~~~ 163 (407)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 98854
No 498
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=95.15 E-value=0.025 Score=43.93 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=18.1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhchhH
Q 040557 13 LAALFFFLGVLSVSVILIILIIILWKFNKAK 43 (407)
Q Consensus 13 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 43 (407)
.++++|++|++++++.+|++++|+.+|+++|
T Consensus 64 ~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 64 PAIIGIIFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred cceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3567777777777666665555555544444
No 499
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=95.14 E-value=0.0073 Score=58.07 Aligned_cols=74 Identities=28% Similarity=0.569 Sum_probs=62.7
Q ss_pred HHHHhcCCCCCCeeeccCCccEEEEEec-CCcEEEEEEeccccChhhHHHHHHHHHHHHcCCCCceeeeeeeeec
Q 040557 77 LKKATKNFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD 150 (407)
Q Consensus 77 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 150 (407)
+....++|..+..+|.|+||+|+.+... ++..+|||++..........+..+|..-+..+.|++++++...+..
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~ 118 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE 118 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence 5556688999999999999999999865 4558999999887777777888999999999999999998776643
No 500
>PTZ00384 choline kinase; Provisional
Probab=95.09 E-value=0.16 Score=48.53 Aligned_cols=73 Identities=18% Similarity=0.306 Sum_probs=43.6
Q ss_pred eeeccCCccEEEEEecCC--cE-----EEEEEeccccChhhHHHHHHHHHHHHcCCCCce-eeeeeeeecCCeeEEEEEe
Q 040557 89 LLGRGGFGPVYRGKLADG--TL-----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL-VRLLGCCSDGSQRLLVYEY 160 (407)
Q Consensus 89 ~lg~G~~g~Vy~~~~~~~--~~-----vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~ 160 (407)
.|..|-...+|++...++ .. |.++.. .........-.+|.+++..+...++ .++++.+.. ++++||
T Consensus 57 ~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~--g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~ef 130 (383)
T PTZ00384 57 KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKS--STYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEW 130 (383)
T ss_pred EeCCcccceEEEEEecCCCCCccccceEEEEec--cCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEE
Confidence 455577788999876433 22 444432 1111111223578888888865554 456666543 589999
Q ss_pred ccCCChh
Q 040557 161 MKNRSLD 167 (407)
Q Consensus 161 ~~~g~L~ 167 (407)
++|.+|.
T Consensus 131 IeGr~l~ 137 (383)
T PTZ00384 131 VEGNTMG 137 (383)
T ss_pred eccccCC
Confidence 9987763
Done!