Query 040558
Match_columns 367
No_of_seqs 311 out of 2734
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 15:21:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 6.3E-80 2.2E-84 646.6 28.3 353 4-367 282-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2.5E-71 8.6E-76 580.7 26.8 342 2-367 278-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.1E-50 1.1E-54 437.4 21.9 294 2-366 277-605 (926)
4 1y9z_A Alkaline serine proteas 99.9 7.9E-28 2.7E-32 242.1 9.2 157 2-241 270-437 (441)
5 3lxu_X Tripeptidyl-peptidase 2 99.9 2.2E-25 7.5E-30 244.3 15.4 216 93-366 417-652 (1354)
6 3afg_A Subtilisin-like serine 99.9 1.7E-23 5.7E-28 215.4 9.6 128 78-221 292-419 (539)
7 1gci_A Subtilisin; hydrolase, 99.9 6.1E-23 2.1E-27 193.7 8.5 108 77-219 162-269 (269)
8 4h6x_A Thiazoline oxidase/subt 99.9 1.1E-22 3.9E-27 199.2 8.3 117 77-219 217-337 (357)
9 1r0r_E Subtilisin carlsberg; h 99.9 1.8E-22 6.1E-27 190.9 8.7 108 77-219 167-274 (274)
10 1to2_E Subtilisin BPN'; serine 99.9 2.4E-22 8.2E-27 190.7 9.3 109 77-220 168-276 (281)
11 1wmd_A Protease; alpha-beta hy 99.9 3.7E-22 1.3E-26 200.3 7.3 130 78-221 174-319 (434)
12 1r6v_A Subtilisin-like serine 99.8 7.7E-22 2.6E-26 206.7 9.2 136 77-231 307-450 (671)
13 2iy9_A SUBA; toxin, shiga, pla 99.8 8.1E-22 2.8E-26 192.1 7.4 107 82-220 214-329 (347)
14 2z2z_A TK-subtilisin precursor 99.8 5.9E-22 2E-26 196.6 5.8 109 78-220 271-392 (395)
15 2ixt_A 36KDA protease; serine 99.8 4.7E-21 1.6E-25 183.9 11.4 120 78-214 181-309 (310)
16 4h6w_A N-terminal cyanobactin 99.8 7.6E-22 2.6E-26 188.9 5.0 115 78-219 169-287 (306)
17 2z30_A TK-subtilisin; thermoco 99.8 1.6E-21 5.4E-26 188.2 7.2 109 78-220 196-317 (320)
18 3lpc_A APRB2; protease, subtil 99.8 3.6E-21 1.2E-25 186.8 9.1 117 78-220 217-337 (340)
19 1thm_A Thermitase; hydrolase(s 99.8 6.1E-21 2.1E-25 180.8 9.7 107 77-219 172-278 (279)
20 3zxy_A Subtilisin-like protein 99.8 1.1E-21 3.6E-26 186.0 4.2 115 78-219 156-274 (282)
21 1dbi_A AK.1 serine protease; h 99.8 8E-21 2.7E-25 180.1 9.4 107 77-219 173-279 (280)
22 2x8j_A Intracellular subtilisi 99.8 6.1E-21 2.1E-25 184.8 7.5 109 77-219 197-310 (327)
23 3t41_A Epidermin leader peptid 99.8 8.7E-21 3E-25 192.0 7.2 112 78-221 332-466 (471)
24 2oxa_A Extracellular serine pr 99.8 6.3E-20 2.1E-24 191.2 11.2 134 82-223 254-428 (600)
25 1p8j_A Furin precursor; prohor 99.8 3.3E-19 1.1E-23 180.7 8.3 128 81-222 205-332 (471)
26 1sh7_A Extracellular subtilisi 99.8 1.4E-18 4.7E-23 165.1 10.8 90 77-187 167-256 (284)
27 2id4_A Kexin; KEX2, kexin, fur 99.8 6E-19 2E-23 180.2 8.4 121 82-222 219-344 (503)
28 2pwa_A Proteinase K; structure 99.8 9.2E-19 3.1E-23 165.9 8.5 88 78-187 172-259 (279)
29 3hjr_A Extracellular serine pr 99.8 1.1E-17 3.7E-22 174.1 17.2 134 80-221 252-426 (600)
30 4dzt_A Aqualysin-1, aqualysin- 99.7 2.2E-18 7.5E-23 162.7 9.3 93 77-188 167-259 (276)
31 2b6n_A Proteinase K; S binding 99.7 4.3E-18 1.5E-22 161.1 8.8 91 78-187 170-260 (278)
32 3f7m_A Alkaline serine proteas 99.7 1.1E-17 3.8E-22 158.2 6.5 89 77-187 172-260 (279)
33 2qtw_B Proprotein convertase s 99.7 3E-17 1E-21 167.6 8.5 92 77-187 175-270 (546)
34 2p4e_P Proprotein convertase s 99.6 2.3E-17 7.8E-22 172.5 0.0 92 77-187 327-422 (692)
35 3icu_A E3 ubiquitin-protein li 99.0 1.2E-10 4.1E-15 103.9 4.1 75 4-82 103-185 (194)
36 1t1e_A Kumamolisin; proenzyme, 98.9 7.9E-10 2.7E-14 113.8 3.9 95 108-219 434-541 (552)
37 1ga6_A Serine-carboxyl protein 98.8 2.2E-09 7.6E-14 105.3 5.2 107 97-219 236-363 (372)
38 2ek8_A Aminopeptidase; metallo 97.9 4.8E-06 1.6E-10 82.7 3.0 64 3-70 112-181 (421)
39 3iib_A Peptidase M28; YP_92679 97.7 1.6E-05 5.6E-10 79.5 4.2 76 2-81 125-224 (444)
40 3kas_A Transferrin receptor pr 97.6 2.5E-05 8.5E-10 81.5 3.6 65 3-71 129-230 (640)
41 3fed_A Glutamate carboxypeptid 97.2 0.00025 8.6E-09 74.7 4.6 36 2-40 151-187 (707)
42 1y9z_A Alkaline serine proteas 96.3 0.0032 1.1E-07 62.6 5.3 44 77-128 168-211 (441)
43 3edy_A Tripeptidyl-peptidase 1 96.0 0.0029 9.9E-08 64.7 3.1 47 108-167 426-472 (544)
44 2ys4_A Hydrocephalus-inducing 95.9 0.028 9.5E-07 45.6 8.2 49 285-338 43-91 (122)
45 2e6j_A Hydin protein; PAPD, st 87.7 0.96 3.3E-05 35.3 5.8 81 268-352 12-93 (112)
46 2r39_A FIXG-related protein; s 84.9 7.5 0.00025 30.8 9.8 52 285-338 33-84 (118)
47 2qsv_A Uncharacterized protein 82.3 5.4 0.00019 35.2 8.8 76 285-364 21-103 (220)
48 3zyz_A Beta-D-glucoside glucoh 77.7 10 0.00036 39.7 10.4 53 284-338 614-674 (713)
49 2x41_A Beta-glucosidase; hydro 76.2 5.8 0.0002 41.7 7.9 70 268-338 598-677 (721)
50 3qbt_B Inositol polyphosphate 72.9 37 0.0013 27.7 12.6 80 285-365 45-136 (140)
51 2qsv_A Uncharacterized protein 72.7 46 0.0016 29.1 11.9 90 268-363 122-217 (220)
52 3qis_A Inositol polyphosphate 63.8 1E+02 0.0034 29.2 13.2 54 285-339 48-105 (366)
53 1msp_A MSP, major sperm protei 63.7 25 0.00087 28.1 7.6 50 285-337 27-76 (126)
54 3idu_A Uncharacterized protein 63.6 27 0.00093 28.2 7.7 49 284-336 34-83 (127)
55 1z9l_A Vesicle-associated memb 61.9 28 0.00097 27.7 7.6 50 285-337 29-78 (128)
56 3abz_A Beta-glucosidase I; gly 59.9 27 0.00091 37.4 8.9 69 266-336 716-795 (845)
57 1wic_A Hypothetical protein ri 59.6 29 0.00098 28.8 7.4 50 285-337 37-86 (152)
58 1row_A SSP-19, MSP-domain prot 57.9 45 0.0015 26.0 7.9 49 286-337 18-66 (109)
59 1m1s_A WR4; structural genomic 56.5 43 0.0015 26.6 7.5 50 286-338 26-75 (116)
60 2cri_A Vesicle-associated memb 54.9 34 0.0012 28.1 7.1 50 285-337 33-82 (147)
61 3isy_A Bsupi, intracellular pr 53.7 83 0.0028 25.1 9.8 51 285-336 20-87 (120)
62 2kq1_A BH0266 protein; solutio 49.8 5 0.00017 32.0 1.0 53 285-337 55-109 (119)
63 1w8o_A Bacterial sialidase; 3D 46.3 1.7E+02 0.006 29.0 12.2 62 270-338 364-426 (601)
64 1wgl_A TOLL-interacting protei 43.4 17 0.00057 25.4 2.8 33 153-185 5-37 (59)
65 3q48_A Chaperone CUPB2; IG fol 37.8 1.5E+02 0.005 26.7 9.0 53 285-338 44-104 (257)
66 3sd2_A Putative member of DUF3 30.1 1.9E+02 0.0065 22.3 8.6 66 272-351 35-100 (101)
67 1ni7_A ER75, hypothetical prot 30.1 38 0.0013 28.4 3.4 31 147-178 79-109 (155)
68 4ep8_B Urease subunit beta; al 29.1 2E+02 0.0068 22.2 6.9 14 285-298 20-33 (101)
69 4ay0_A Chaperone protein CAF1M 28.1 2.1E+02 0.0073 24.9 8.2 55 285-340 28-87 (218)
70 3lyw_A YBBR family protein; st 26.6 57 0.0019 24.7 3.5 38 285-322 43-81 (90)
71 3g0m_A Cysteine desulfuration 25.8 37 0.0013 27.9 2.5 34 144-178 69-102 (141)
72 4ubp_B Protein (urease (chain 24.8 2.3E+02 0.0078 22.7 6.9 14 285-298 26-39 (126)
73 4ac7_B Urease subunit beta; hy 24.8 2.3E+02 0.0078 22.7 6.9 14 285-298 26-39 (126)
74 2l04_A Major tail protein V; b 24.8 50 0.0017 24.9 2.9 24 313-337 9-32 (91)
75 3c8o_A Regulator of ribonuclea 24.4 65 0.0022 27.0 3.9 36 5-40 57-95 (162)
76 2xg5_A PAPD, chaperone protein 24.3 3.5E+02 0.012 23.4 9.4 52 285-337 16-73 (218)
77 4djm_A DRAB; chaperone, PILI; 23.8 3E+02 0.01 24.3 8.4 53 285-338 38-93 (239)
78 2l0d_A Cell surface protein; s 23.4 2.7E+02 0.0091 21.7 7.9 22 285-306 21-43 (114)
79 1q5x_A Regulator of RNAse E ac 23.0 65 0.0022 26.9 3.6 36 5-40 57-95 (161)
80 1vi4_A Regulator of ribonuclea 22.7 67 0.0023 27.3 3.6 38 4-41 59-99 (174)
81 3ndz_E Endoglucanase D; cellot 22.5 1.5E+02 0.005 23.0 5.3 30 285-314 17-47 (107)
82 1j3l_A Demethylmenaquinone met 22.4 77 0.0026 26.6 3.9 35 5-39 56-93 (164)
83 1nxj_A Probable S-adenosylmeth 21.7 61 0.0021 27.8 3.2 37 4-40 85-124 (183)
84 2pcn_A S-adenosylmethionine:2- 21.1 72 0.0025 26.7 3.5 36 5-40 55-93 (161)
85 1otr_A Protein CUE2; protein-p 21.0 80 0.0027 21.0 3.0 25 160-184 7-31 (49)
86 1yew_A Particulate methane mon 21.0 2.9E+02 0.0099 26.3 7.9 49 285-337 266-336 (382)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=6.3e-80 Score=646.57 Aligned_cols=353 Identities=34% Similarity=0.546 Sum_probs=311.6
Q ss_pred CceeEEEEEeCCCCCccHHHH-HHHHHcCceEEEEEecCCCCCCCCCCcccceeecccccceeeEEeecccCCCceeecc
Q 040558 4 VAGKIIVCVDDDPTVPRKIKK-LVAEDADAKGLILIDEDYEKHVPFDSGIFPLSEVGSVAGFQIIHYINSTKNPTATILP 82 (367)
Q Consensus 4 V~GKIvl~~~g~~~~~~~~~K-~~a~~aGa~gvi~~n~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~ 82 (367)
++||||||+|| .|.+.+| .+++++||+|+||+|+. .... .+.+.+|+++|+.++|+.|++|++++.+++++|.+
T Consensus 282 l~GkIvlc~~g---~~~~~~k~~~~~~~Ga~g~i~~n~~-~~~~-~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~ 356 (649)
T 3i6s_A 282 PENTIVICDDN---GDFSDQMRIITRARLKAAIFISEDP-GVFR-SATFPNPGVVVNKKEGKQVINYVKNSVTPTATITF 356 (649)
T ss_dssp GGGCEEEECCC---SCHHHHHHHHHHHTCSEEEEECCCG-GGGG-CCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred cCCcEEEEeCC---CccHHHHHHHHHhcCceEEEEecCc-cccc-cccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEee
Confidence 39999999999 8999999 99999999999999976 3322 36789999999999999999999999999999999
Q ss_pred cccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCC-CCCceEEeCccccchHHHHHHH
Q 040558 83 TVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGK-KPAGYAIKSGTSMACPHVTGAA 161 (367)
Q Consensus 83 ~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~a 161 (367)
..++.+..+++.++.||||||+...+++|||||+|||++|+++|+..........+. ....|..+||||||||||||+|
T Consensus 357 ~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGva 436 (649)
T 3i6s_A 357 QETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIA 436 (649)
T ss_dssp EEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHH
T ss_pred cceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHH
Confidence 998888888999999999999987789999999999999999998754332222222 3368999999999999999999
Q ss_pred HHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCC-CCCCCCCCCcccCccChhhhcCcCcccccChhhHHHHhhhcCC
Q 040558 162 AFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNN-AGSTASPHETGVGEISPLKALNPGLVFETTTKDYLRFLCYFGY 240 (367)
Q Consensus 162 ALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~-~~~~~~~~~~G~G~in~~~A~~~~lv~d~~~~dy~~~lc~~~~ 240 (367)
|||||+||+|+|++||++||+||.++++.+.++.+. .+.++.+++||+|+||+.+|++||||||+..+||+.|||++||
T Consensus 437 ALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y 516 (649)
T 3i6s_A 437 AMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNF 516 (649)
T ss_dssp HHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCC
T ss_pred HHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCC
Confidence 999999999999999999999999999999888775 4667889999999999999999999999999999999999999
Q ss_pred Cccceeecccccccc--CCCCCCCCCCCCCCCCeEEEee-cCCCcce--EEEEEEEEecCCCceeEEEEEeCCCCeEEEE
Q 040558 241 SEKNIRSMSKYTNFN--CPRNSIDNLISNINYPSISISK-LDRHRAA--ETVKRTVTNVGLQNVTYISRVNAPSGLIVKV 315 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~--c~~~~~~~~~~~lN~psi~~~~-~~~~~~~--~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v 315 (367)
+.++|++|++ +++. |+. .+++||||||++.. +.+.... ++|+|||||||+...+|+++++.|.|++|+|
T Consensus 517 ~~~~i~~~~~-~~~~~~C~~-----~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v 590 (649)
T 3i6s_A 517 TEEQFKTIAR-SSASHNCSN-----PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISV 590 (649)
T ss_dssp CHHHHHHHHT-TTSCC-CCC-----CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEE
T ss_pred Ccccceeeec-CCCcCCCCC-----chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEE
Confidence 9999999998 6677 964 46799999999987 4443222 7999999999999999999999999999999
Q ss_pred ccceeEEecCceEEEEEEEEEeee-cCCceEEEEEEEEC--CceEEEEEEEEEeC
Q 040558 316 LPQKLVFAEGVKRMSFSVSFYGKE-AAGGYNFGSVTWSD--NRHSVQMMFAVNVQ 367 (367)
Q Consensus 316 ~P~~l~~~~~g~~~~~~vt~~~~~-~~~~~~~G~l~~~~--~~~~vr~P~~v~~~ 367 (367)
+|++|+|.+.+|+++|+|||+... ..+.|.||+|+|++ ++|.||+||+|+++
T Consensus 591 ~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 591 SPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp ESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred ECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 999999988999999999999853 34568999999999 89999999999864
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.5e-71 Score=580.65 Aligned_cols=342 Identities=33% Similarity=0.542 Sum_probs=272.9
Q ss_pred CCCceeEEEEEeCCCCCccHHHH-HHHHHcCceEEEEEecCCCCCCCCCCcccceeecccccceeeEEeecccCCCceee
Q 040558 2 KKVAGKIIVCVDDDPTVPRKIKK-LVAEDADAKGLILIDEDYEKHVPFDSGIFPLSEVGSVAGFQIIHYINSTKNPTATI 80 (367)
Q Consensus 2 ~~V~GKIvl~~~g~~~~~~~~~K-~~a~~aGa~gvi~~n~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i 80 (367)
.+++||||||+++ +..+ .+.+.+|+.|+|++++. .+. .+.+.+|+.+++.+++..++.|+..+..+.+.+
T Consensus 278 ~~v~gkivl~~~~------~~~~~~~~~~~Ga~gvi~~~~~-~~~--~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~ 348 (621)
T 3vta_A 278 NLLKGKIVVCEAS------FGPHEFFKSLDGAAGVLMTSNT-RDY--ADSYPLPSSVLDPNDLLATLRYIYSIRSPGATI 348 (621)
T ss_dssp GGTTTSEEECSSC------CCHHHHHHHHTTCSEEEEECSC-CSS--CCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEE
T ss_pred ccccceEEEEecC------CChhHHhhhhcceeEEEEEecC-CCc--ccccccceEEECHHHHHHHHHHHhccCCcceEE
Confidence 4689999999875 3456 68888999999999876 432 256789999999999999999999999888888
Q ss_pred cccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHHHHH
Q 040558 81 LPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHVTGA 160 (367)
Q Consensus 81 ~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~ 160 (367)
....++. ....+.++.||||||+...++++||||+|||++|+++|+...... .......|..+||||||||||||+
T Consensus 349 ~~~~~~~-~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~---~~~~~~~y~~~SGTSMAaPhVAGv 424 (621)
T 3vta_A 349 FKSTTIL-NASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG---GIRRNTLFNIISGTSMSCPHITGI 424 (621)
T ss_dssp CCCEEEE-CTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBT---TBCCCCSEEEECSHHHHHHHHHHH
T ss_pred ecceEec-cCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCcccccc---CcCCCCcceEecCccccchhhhhH
Confidence 7666554 456899999999999987789999999999999999998644221 223347899999999999999999
Q ss_pred HHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcCcccccChhhHHHHhhhcCC
Q 040558 161 AAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPGLVFETTTKDYLRFLCYFGY 240 (367)
Q Consensus 161 aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~lv~d~~~~dy~~~lc~~~~ 240 (367)
||||||+||+|+|++||++||+||++++.. ..+..+++||+|+|||.+|++||||||+...||+.|||.++|
T Consensus 425 aALl~q~~P~~spa~IksaLmtTA~~~~~~--------~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~ 496 (621)
T 3vta_A 425 ATYVKTYNPTWSPAAIKSALMTTASPMNAR--------FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGY 496 (621)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHTCBCCCTT--------TCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC--------
T ss_pred HHHHHHHCCCCCHHHHHHHHHhcCCccccc--------CCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCC
Confidence 999999999999999999999999977553 345678999999999999999999999999999999999999
Q ss_pred CccceeeccccccccCCCCCCCCCCCCCCCCeEEEeecCCCcceEEEEEEEEecCCCceeEEEEEeCCCCeEEEEcccee
Q 040558 241 SEKNIRSMSKYTNFNCPRNSIDNLISNINYPSISISKLDRHRAAETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKL 320 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~c~~~~~~~~~~~lN~psi~~~~~~~~~~~~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l 320 (367)
+..+++.+++ ....|.. ......++||||||++........+++|+|||||||+...+|+++++.|.|++|+|+|++|
T Consensus 497 ~~~~~~~~~~-~~~~~~~-~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l 574 (621)
T 3vta_A 497 NTQAVRRITG-DYSACTS-GNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVL 574 (621)
T ss_dssp -----------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEE
T ss_pred Cchhheeeec-cccccCC-CCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEE
Confidence 9999999988 6777864 1344578999999999654443345899999999999999999999999999999999999
Q ss_pred EEecCceEEEEEEEEEeeecCCceEEEEEEEECCceEEEEEEEEEeC
Q 040558 321 VFAEGVKRMSFSVSFYGKEAAGGYNFGSVTWSDNRHSVQMMFAVNVQ 367 (367)
Q Consensus 321 ~~~~~g~~~~~~vt~~~~~~~~~~~~G~l~~~~~~~~vr~P~~v~~~ 367 (367)
+|++.+|+++|+|||+.. ..+.|.||+|+|++++|.||+||+|+.+
T Consensus 575 ~f~~~~~~~~~~vt~~~~-~~~~~~~g~l~w~d~~h~Vr~Pi~v~~~ 620 (621)
T 3vta_A 575 SFNGLGDRKSFTLTVRGS-IKGFVVSASLVWSDGVHYVRSPITITSL 620 (621)
T ss_dssp EECSTTCEEEEEEEEEEC-CCSSEEEEEEEEECSSCCCEEEEEEECC
T ss_pred EEcCCCcEEEEEEEEEec-CCCceEEEEEEEEcCCEEEEeCEEEEEe
Confidence 999899999999999863 4567899999999999999999999864
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.1e-50 Score=437.39 Aligned_cols=294 Identities=22% Similarity=0.291 Sum_probs=234.4
Q ss_pred CCCceeEEEEEeCCCCCccHHHH-HHHHHcCceEEEEEecCCCCCCC---CCCcccceeecccccceeeEEeecccCCCc
Q 040558 2 KKVAGKIIVCVDDDPTVPRKIKK-LVAEDADAKGLILIDEDYEKHVP---FDSGIFPLSEVGSVAGFQIIHYINSTKNPT 77 (367)
Q Consensus 2 ~~V~GKIvl~~~g~~~~~~~~~K-~~a~~aGa~gvi~~n~~~~~~~~---~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~ 77 (367)
++++||||||+|| .|.+.+| .+++++||.|||++|+. .+... .....+|+++|+.++|..|++ ....+
T Consensus 277 ~~v~Gkivl~~rg---~~~~~~k~~~~~~~Ga~gvi~~n~~-~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~t 348 (926)
T 1xf1_A 277 KDVKGKIALIERG---DIDFKDKIAKAKKAGAVGVLIYDNQ-DKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKT 348 (926)
T ss_dssp TTCTTSEEEEECC---SSCHHHHHHHHHHTTCSEEEEECSS-TTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCE
T ss_pred hhcCCeEEEEECC---CCCHHHHHHHHHhCCCcEEEEEecC-CCCcccccCccccccEEEEeHHHHHHHHh----CCceE
Confidence 3789999999999 8999999 99999999999999987 44322 245789999999999987763 33344
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+++.....+......+.++.||||||+. ++++||||+|||++|++++++ +.|..+||||||||||
T Consensus 349 i~~~~~~~~~~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhV 413 (926)
T 1xf1_A 349 ITFNATPKVLPTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLV 413 (926)
T ss_dssp EEECSSCEEEECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHH
T ss_pred EEecccceecccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHH
Confidence 4444433334455678999999999985 899999999999999999976 6799999999999999
Q ss_pred HHHHHHHH----hhCCCCCHHH----HHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcCcccccChh
Q 040558 158 TGAAAFIR----SVHRRWSSSI----IKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPGLVFETTTK 229 (367)
Q Consensus 158 AG~aALl~----~~~p~~s~~~----ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~lv~d~~~~ 229 (367)
||+||||+ ++||+|+|+| ||++||+||.+++..+ ....+++++||+|+||+.+|+++.+
T Consensus 414 AG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~------~~~~~~~~~~G~G~vn~~~A~~~~~------- 480 (926)
T 1xf1_A 414 AGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDED------EKAYFSPRQQGAGAVDAKKASAATM------- 480 (926)
T ss_dssp HHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG------GTEECCHHHHTTCBCCHHHHHHCSE-------
T ss_pred HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC------CCccCChhccCCCccCHHHhcCCCe-------
Confidence 99999995 5699999997 9999999999775321 1224568899999999999999865
Q ss_pred hHHHHhhhcCCCccceeeccccccccCCCCCCCCCCCCCCCCeEEEeecCCCcceEEEEEEEEecCCC--ceeEEEEEeC
Q 040558 230 DYLRFLCYFGYSEKNIRSMSKYTNFNCPRNSIDNLISNINYPSISISKLDRHRAAETVKRTVTNVGLQ--NVTYISRVNA 307 (367)
Q Consensus 230 dy~~~lc~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~lN~psi~~~~~~~~~~~~t~~rtvtNvg~~--~~ty~~~v~~ 307 (367)
|||..+++.. +|.++++.++ ++++|||||+|+. ..+|++.+..
T Consensus 481 ----~l~~~~~~~~----------------------------~i~l~~~~~~---~~~~~tv~N~g~~~~~~~y~~~v~~ 525 (926)
T 1xf1_A 481 ----YVTDKDNTSS----------------------------KVHLNNVSDK---FEVTVNVHNKSDKPQELYYQATVQT 525 (926)
T ss_dssp ----EEEESSSSCS----------------------------CEEEEEECSE---EEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred ----EEEcCCCCcc----------------------------eeeccccCcc---EEEEEEEEEeCCCceeEEEEEEEEe
Confidence 6777654332 3344445555 8899999999985 4678888765
Q ss_pred --CCCeEEEEccceeEEec-------CceEEEEEEEEEeee---------cCCceEEEEEEEE--CCce-EEEEEEEEEe
Q 040558 308 --PSGLIVKVLPQKLVFAE-------GVKRMSFSVSFYGKE---------AAGGYNFGSVTWS--DNRH-SVQMMFAVNV 366 (367)
Q Consensus 308 --p~g~~v~v~P~~l~~~~-------~g~~~~~~vt~~~~~---------~~~~~~~G~l~~~--~~~~-~vr~P~~v~~ 366 (367)
|.++.++|.|..|.|.. +||+++|+|+|+... ..+.|+||+|+|+ ++.| .||+||++..
T Consensus 526 ~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 526 DKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred ccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 67889999898776644 499999999999741 1345789999999 4555 4999999863
No 4
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=99.94 E-value=7.9e-28 Score=242.11 Aligned_cols=157 Identities=26% Similarity=0.333 Sum_probs=124.4
Q ss_pred CCCceeEEEEEeCCC--CCccHHHH-HHHHHcCceEEEEEecCCCC-CCC-------CCCcccceeecccccceeeEEee
Q 040558 2 KKVAGKIIVCVDDDP--TVPRKIKK-LVAEDADAKGLILIDEDYEK-HVP-------FDSGIFPLSEVGSVAGFQIIHYI 70 (367)
Q Consensus 2 ~~V~GKIvl~~~g~~--~~~~~~~K-~~a~~aGa~gvi~~n~~~~~-~~~-------~~~~~~p~~~i~~~~g~~l~~~~ 70 (367)
.+++||||||+|+.. ..+.+.+| .+++++||+|+|++|+. .. +.. .....+|.+.|+.++|.+|++|+
T Consensus 270 ~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~-~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~ 348 (441)
T 1y9z_A 270 GNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNS-ALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKL 348 (441)
T ss_dssp CCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCT-TSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTT
T ss_pred CCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCC-CccccccccccccccCccccEEEEeHHHHHHHHHHh
Confidence 579999999999821 01378899 99999999999999876 32 111 23467899999999999998876
Q ss_pred cccCCCceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCcc
Q 040558 71 NSTKNPTATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGT 150 (367)
Q Consensus 71 ~~~~~~~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGT 150 (367)
.++ +++ ++... ..|..++||
T Consensus 349 ~~~----~t~-------------------------------------------~~~~~-------------~~y~~~sGT 368 (441)
T 1y9z_A 349 GQS----TTV-------------------------------------------SNQGN-------------QDYEYYNGT 368 (441)
T ss_dssp TSE----EEE-------------------------------------------EEEEE-------------ESEEEECSH
T ss_pred cCC----ccc-------------------------------------------ccccC-------------CCceeeccc
Confidence 431 000 11111 679999999
Q ss_pred ccchHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcCcccccChhh
Q 040558 151 SMACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPGLVFETTTKD 230 (367)
Q Consensus 151 SmAaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~lv~d~~~~d 230 (367)
|||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+ |
T Consensus 369 SmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~-----------~ 426 (441)
T 1y9z_A 369 SMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK-----------A 426 (441)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH-----------H
T ss_pred ccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH-----------H
Confidence 99999999999999999999999999999999999775432 3567999999999995 5
Q ss_pred HHHHhhhcCCC
Q 040558 231 YLRFLCYFGYS 241 (367)
Q Consensus 231 y~~~lc~~~~~ 241 (367)
|+.|||.+++.
T Consensus 427 ~~~~lc~~~~~ 437 (441)
T 1y9z_A 427 YLDESCTGPTD 437 (441)
T ss_dssp HHHHCTTCC--
T ss_pred HHHhhhcCCCC
Confidence 99999998754
No 5
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=99.92 E-value=2.2e-25 Score=244.33 Aligned_cols=216 Identities=22% Similarity=0.180 Sum_probs=147.4
Q ss_pred CccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHHHHHHHHHHh----hC
Q 040558 93 PVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHVTGAAAFIRS----VH 168 (367)
Q Consensus 93 ~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~ 168 (367)
+.++.||||||.. ++.+||||+|||++|+++..... +.|..++|||||||||||++|||++ ++
T Consensus 417 g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~ 483 (1354)
T 3lxu_X 417 GNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQN 483 (1354)
T ss_dssp -CCCCCCCCSCCS--SSSCCEEEEEEC--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTT
T ss_pred CccccccCCCCCc--cCCCcceEEecCceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhC
Confidence 6789999999986 78999999999999998755322 6789999999999999999999986 89
Q ss_pred CCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcCcccccChhhHHHHhhhcCCCcc-ceee
Q 040558 169 RRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPGLVFETTTKDYLRFLCYFGYSEK-NIRS 247 (367)
Q Consensus 169 p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~-~~~~ 247 (367)
|.|++.+||++|++||.+++. ..++.||+|+||+.+|++..+.++..+.+|+.|+|..++... .|
T Consensus 484 P~LTp~qVk~lL~~TA~~~~~------------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgI-- 549 (1354)
T 3lxu_X 484 IEYSPYSIKRAISVTATKLGY------------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGI-- 549 (1354)
T ss_dssp CCCCHHHHHHHHHTTSBCCTT------------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSE--
T ss_pred CCCCHHHHHHHHHHhCccCCC------------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCce--
Confidence 999999999999999997532 345689999999999999999999999999999999875322 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCCeEEEeecCCCcceEEEEEEEE----ecC---C-Cce--eEEEEEeCCCCeEEEEcc
Q 040558 248 MSKYTNFNCPRNSIDNLISNINYPSISISKLDRHRAAETVKRTVT----NVG---L-QNV--TYISRVNAPSGLIVKVLP 317 (367)
Q Consensus 248 ~~~~~~~~c~~~~~~~~~~~lN~psi~~~~~~~~~~~~t~~rtvt----Nvg---~-~~~--ty~~~v~~p~g~~v~v~P 317 (367)
..+ .+ ..... .+++.+|+ |.. . ... .-++.+.... --|. .|
T Consensus 550 ylR-------------------~~-----~~~~~---~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p 600 (1354)
T 3lxu_X 550 HLR-------------------QG-----VQRNS---IDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CG 600 (1354)
T ss_dssp EEC-------------------SS-----CCCSC---EEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-EC
T ss_pred EEe-------------------cc-----ccCCc---eEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cc
Confidence 111 00 00111 33333332 211 1 111 1222222221 1122 37
Q ss_pred ceeEEecCceEEEEEEEEEeeecCCceEEEEEEEEC-----CceEEEEEEEEEe
Q 040558 318 QKLVFAEGVKRMSFSVSFYGKEAAGGYNFGSVTWSD-----NRHSVQMMFAVNV 366 (367)
Q Consensus 318 ~~l~~~~~g~~~~~~vt~~~~~~~~~~~~G~l~~~~-----~~~~vr~P~~v~~ 366 (367)
..|.+ .++.++|.|.++...+..+.+++.|..-| .+...|+||.|-.
T Consensus 601 ~~l~l--~~~~r~~~v~vDp~~L~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 601 AFLDL--SYGTRSIAVRVDPTGLQPGVHSAVIRAYDTDCVQKGSLFEIPVTVVQ 652 (1354)
T ss_dssp SCEEC--TTSCEEEEEEECGGGCCSEEEEEEEEEEESSCTTSCCSEEEEEEEEE
T ss_pred cceee--cCCCceEEEEECCCCCCCcceeEEEEEEEcCCcccCceEEeeEEEEe
Confidence 77776 46678999999998888899999998553 2688999998864
No 6
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=99.89 E-value=1.7e-23 Score=215.43 Aligned_cols=128 Identities=33% Similarity=0.459 Sum_probs=106.6
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+.....++|++.+..+.+++||||||.. ++++||||+|||++|+++++..... .+.....|..++|||||||||
T Consensus 292 a~~~~vitVgA~~~~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP~V 365 (539)
T 3afg_A 292 AAASKVITVGAVDKYDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATPHV 365 (539)
T ss_dssp TTCSSSEEEEEECTTSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHHHH
T ss_pred ccCCceEEEeeecCCcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHHHH
Confidence 4556678899988899999999999986 7899999999999999998653210 011124699999999999999
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcC
Q 040558 158 TGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPG 221 (367)
Q Consensus 158 AG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~ 221 (367)
||++|||+|+||+|++++||++|++||+.++.. ...+..||+|+||+.+|++..
T Consensus 366 AG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~----------~~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 366 AGIAALLLQAHPSWTPDKVKTALIETADIVKPD----------EIADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGG----------GCSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC----------CCCccCccCCccCHHHHhhhc
Confidence 999999999999999999999999999976321 135678999999999999843
No 7
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=99.87 E-value=6.1e-23 Score=193.68 Aligned_cols=108 Identities=34% Similarity=0.450 Sum_probs=97.2
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++||.. ||+|||++|+++++. +.|..++||||||||
T Consensus 162 Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 220 (269)
T 1gci_A 162 PARYANAMAVGATDQNNNRASFSQYGAGL--------DIVAPGVNVQSTYPG-------------STYASLNGTSMATPH 220 (269)
T ss_dssp TTTSTTEEEEEEECTTSCBCTTCCCSTTE--------EEEEECSSEEEEETT-------------TEEEEECSHHHHHHH
T ss_pred CccCCCeEEEEeecCCCCCCCCCCCCCCc--------ceEecCCCeEeecCC-------------CCEEEcCcHHHHHHH
Confidence 35566778899999999999999999864 999999999999875 689999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
|||++|||+|++|.|++.|||++|++||+++. .+..||+|+||+.+|++
T Consensus 221 vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 221 VAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC--------------CCCCcccCccCHHHHcC
Confidence 99999999999999999999999999999652 35679999999999985
No 8
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=99.87 E-value=1.1e-22 Score=199.22 Aligned_cols=117 Identities=27% Similarity=0.299 Sum_probs=85.4
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.|||||+.. .||||+|||++|+++++.. +.|..++||||||||
T Consensus 217 Pa~~~~vi~Vga~~~~~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~~~------------~~~~~~sGTS~AaP~ 279 (357)
T 4h6x_A 217 PAVLPGTLAVGAAKVDGTPCHFSNWGGNN-----TKEGILAPGEEILGAQPCT------------EEPVRLTGTSMAAPV 279 (357)
T ss_dssp ------CEEEEEECTTSSBCTTCC---CT-----TTTEEEEECSSEEECCTTC------------SCCEEECSHHHHHHH
T ss_pred cccCCCCceEEEeccCCcccccccCCCCC-----CccceeecCCCeEeccCCC------------CcccccCcHHHHHHH
Confidence 46677888999999999999999999753 5899999999999998752 457789999999999
Q ss_pred HHHHHHHHHhh----CCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 157 VTGAAAFIRSV----HRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 157 VAG~aALl~~~----~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
|||++|||+++ +|.|+++|||++|++||++++.. ....+..||+|+||+.+|++
T Consensus 280 vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~---------~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 280 MTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE---------VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-----------------------CTTCBCCHHHHHH
T ss_pred HHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC---------CCCCcccceeEEecHHHHHH
Confidence 99999999964 56899999999999999976431 22345679999999999997
No 9
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=99.87 E-value=1.8e-22 Score=190.88 Aligned_cols=108 Identities=36% Similarity=0.407 Sum_probs=97.0
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++||. |||+|||++|+++++. +.|..++||||||||
T Consensus 167 Pa~~~~vi~Vga~~~~~~~~~~S~~G~~--------~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 225 (274)
T 1r0r_E 167 PAKYDSVIAVGAVDSNSNRASFSSVGAE--------LEVMAPGAGVYSTYPT-------------NTYATLNGTSMASPH 225 (274)
T ss_dssp TTTSTTSEEEEEECTTSCBCTTCCCSTT--------EEEEEECSSEEEEETT-------------TEEEEECSHHHHHHH
T ss_pred CCCCCcEEEEEEecCCCCcCccCCCCCC--------ceEEeCCCCeEeecCC-------------CCEEEeccHHHHHHH
Confidence 3455667889998889999999999984 5999999999999876 689999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
|||++|||+|++|.|++.+||++|++||+++. ++..||+|+||+.+|++
T Consensus 226 vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 226 VAGAAALILSKHPNLSASQVRNRLSSTATYLG--------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------------CCCCcccCccCHHHHhC
Confidence 99999999999999999999999999999651 35679999999999985
No 10
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=99.86 E-value=2.4e-22 Score=190.70 Aligned_cols=109 Identities=36% Similarity=0.475 Sum_probs=98.0
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++||. |||+|||++|+++++. +.|..++||||||||
T Consensus 168 Pa~~~~vi~Vga~~~~~~~~~fS~~G~~--------~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 226 (281)
T 1to2_E 168 PGKYPSVIAVGAVDSSNQRASFSSVGPE--------LDVMAPGVSIQSTLPG-------------NKYGAYNGTSMASPH 226 (281)
T ss_dssp TTTSTTSEEEEEECTTSCBCTTCCCSTT--------CCEEEECSSEEEEETT-------------TEEEEECBHHHHHHH
T ss_pred CcCCCCEEEEEEecCCCCcCCcCCCCCC--------ceEEecCCCeEeecCC-------------CCEEecCcHHHHHHH
Confidence 3556677889998889999999999985 4999999999999875 679999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCc
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNP 220 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~ 220 (367)
|||++|||+|++|.|++++||++|++||+++. +++.||+|+||+.+|+.+
T Consensus 227 vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 227 VAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------CHHHHTTCBCCHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--------------CCCCcccceecHHHHhhh
Confidence 99999999999999999999999999999652 456799999999999984
No 11
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=99.85 E-value=3.7e-22 Score=200.27 Aligned_cols=130 Identities=34% Similarity=0.419 Sum_probs=103.7
Q ss_pred eeecccccccccCC-----------CCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEE
Q 040558 78 ATILPTVDVQRYKP-----------APVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAI 146 (367)
Q Consensus 78 ~~i~~~~~v~~~~~-----------~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 146 (367)
+.....++|++.+. .+.++.|||+||.. ++++||||+|||++|+++++........ .....+.|..
T Consensus 174 a~~~~vitVga~~~~~~~~~~~~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~ 250 (434)
T 1wmd_A 174 GTAKNAITVGATENLRPSFGSYADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAY 250 (434)
T ss_dssp TTCSSSEEEEEECCSCGGGCGGGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEE
T ss_pred ccCCccEEEecccccCcccCcccCCCCccccccCCCCCC--CCCCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEe
Confidence 44556678887765 68999999999986 7999999999999999998642210000 0001268999
Q ss_pred eCccccchHHHHHHHHHHHhhCCCC-----CHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcC
Q 040558 147 KSGTSMACPHVTGAAAFIRSVHRRW-----SSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPG 221 (367)
Q Consensus 147 ~sGTSmAaP~VAG~aALl~~~~p~~-----s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~ 221 (367)
++|||||||||||++|||+|++|++ ++++||++|+++|+.+. ....+..||||++|+.+|+...
T Consensus 251 ~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~-----------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 251 MGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG-----------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS-----------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred ecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC-----------CCCCCccCCcCeEeHHHhcccc
Confidence 9999999999999999999998865 89999999999998642 2346778999999999999754
No 12
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=99.85 E-value=7.7e-22 Score=206.68 Aligned_cols=136 Identities=29% Similarity=0.315 Sum_probs=107.7
Q ss_pred ceeecccccccccCCCCc---cccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCC-----CCCCCCCCceEEeC
Q 040558 77 TATILPTVDVQRYKPAPV---VAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGS-----FPIGKKPAGYAIKS 148 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~---~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~-----~~~~~~~~~y~~~s 148 (367)
++..+..++|++.+..+. +++|||+||.. ||+|||++|+++++....... .......+.|..++
T Consensus 307 PA~~~~VItVgA~d~~g~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~s 378 (671)
T 1r6v_A 307 PAGYPGVIQVAALDYYGGTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQ 378 (671)
T ss_dssp TTTSTTCEEEEEEEEETTEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEE
T ss_pred cccCCCeEEEEEEcCCCCceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEec
Confidence 355667788888777666 99999999965 999999999999876321100 00111235799999
Q ss_pred ccccchHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcCcccccCh
Q 040558 149 GTSMACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPGLVFETTT 228 (367)
Q Consensus 149 GTSmAaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~lv~d~~~ 228 (367)
|||||||||||++|||+|++|+|++++||++|++||.+++. +..+..||+|+||+.+|++..|..+...
T Consensus 379 GTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~-----------~g~d~~~G~G~vna~~Al~~~l~~~~~~ 447 (671)
T 1r6v_A 379 GTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNG-----------NGWDHDTGYGLVKLDAALQGPLPTQGGV 447 (671)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSS-----------SSCBTTTBTCBCCHHHHHHCCCCSSSEE
T ss_pred CccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCC-----------CCCCCCcccceeCHHHHhhhhcCCCCCc
Confidence 99999999999999999999999999999999999997642 2345689999999999999888766554
Q ss_pred hhH
Q 040558 229 KDY 231 (367)
Q Consensus 229 ~dy 231 (367)
.||
T Consensus 448 ~~~ 450 (671)
T 1r6v_A 448 EEF 450 (671)
T ss_dssp EEE
T ss_pred cce
Confidence 443
No 13
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=99.84 E-value=8.1e-22 Score=192.13 Aligned_cols=107 Identities=25% Similarity=0.216 Sum_probs=95.8
Q ss_pred ccccccccCC--CCccc-------cCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCcccc
Q 040558 82 PTVDVQRYKP--APVVA-------YFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSM 152 (367)
Q Consensus 82 ~~~~v~~~~~--~~~~a-------~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 152 (367)
..++|++.+. .+.++ .||++||. ||||+|||++|+++++. +.|..++||||
T Consensus 214 ~vi~Vga~~~~~~g~~~~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~ 273 (347)
T 2iy9_A 214 PVIRVAALAQYRKGETPVLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSE 273 (347)
T ss_dssp CEEEEEEECCCCTTSCCCBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHH
T ss_pred CEEEEEEcccCCCCceecccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHH
Confidence 6778888887 88888 99999984 67999999999999875 67999999999
Q ss_pred chHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCc
Q 040558 153 ACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNP 220 (367)
Q Consensus 153 AaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~ 220 (367)
|||||||++|||+|++|+|++.+||++|++||+++... ....+|+|+||+.+|++.
T Consensus 274 AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 274 ATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSL------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGG------------TTTSGGGEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCC------------CCccccCCEecHHHHHHH
Confidence 99999999999999999999999999999999976432 135899999999999984
No 14
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=99.84 E-value=5.9e-22 Score=196.57 Aligned_cols=109 Identities=30% Similarity=0.417 Sum_probs=96.7
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+..+..++|++.+..+.++.||+||| +|+|||++|+++++. +.|..++|||||||||
T Consensus 271 a~~~~vi~Vga~~~~~~~a~fS~~G~----------~v~APG~~i~s~~~~-------------~~y~~~sGTS~AaP~V 327 (395)
T 2z2z_A 271 AAYPEVIAVGAIDSNDNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHV 327 (395)
T ss_dssp TTSTTEEEEEEECTTSCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEEESHHHHHHHH
T ss_pred cCCCCEEEEEEecCCCCCCcccCCCC----------CEEeCCCCeeeecCC-------------CceEecCCHHHHHHHH
Confidence 44566788999899999999999997 679999999999986 6899999999999999
Q ss_pred HHHHHHHHhhCC-------------CCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCc
Q 040558 158 TGAAAFIRSVHR-------------RWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNP 220 (367)
Q Consensus 158 AG~aALl~~~~p-------------~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~ 220 (367)
||++|||++++| .|++.+||++|++||+++.. ...+..||+|+||+.+|++.
T Consensus 328 aG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~-----------~g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 328 SGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP-----------TGWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS-----------SSSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCC-----------CCCCCCccCceeCHHHHHHH
Confidence 999999999999 99999999999999997632 23467899999999999873
No 15
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=99.84 E-value=4.7e-21 Score=183.85 Aligned_cols=120 Identities=28% Similarity=0.339 Sum_probs=97.6
Q ss_pred eeecccccccccC---CCC--ccccCCCCCCCCCCC----CCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeC
Q 040558 78 ATILPTVDVQRYK---PAP--VVAYFSSRGPGELTE----NILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKS 148 (367)
Q Consensus 78 ~~i~~~~~v~~~~---~~~--~~a~fSs~Gp~~~~~----~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~s 148 (367)
+..+..++|++.+ ..+ .++.||++||..... ...||||+|||++|+++++. +.|..++
T Consensus 181 a~~~~vi~Vga~~~~~~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~-------------~~~~~~s 247 (310)
T 2ixt_A 181 GALPNAIAVAALENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYN-------------GGYNTIS 247 (310)
T ss_dssp TTSTTSEEEEEEEEEEETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTT-------------SSEEEEC
T ss_pred ccCCCeeEEEeccccccCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCC-------------CCEEeec
Confidence 4456667787766 566 899999999953211 23499999999999999875 6799999
Q ss_pred ccccchHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccCh
Q 040558 149 GTSMACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISP 214 (367)
Q Consensus 149 GTSmAaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~ 214 (367)
|||||||||||++|||+|++|.|++++||++|++||++.+..+ .......++..+|+|++|+
T Consensus 248 GTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~----~~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 248 GTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG----GYGAAIGDDYASGFGFARV 309 (310)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCB----STTCCSSSBTTTBTCBCCC
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCC----CcccccCCccccccceeec
Confidence 9999999999999999999999999999999999999875432 1122456788999999985
No 16
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=99.84 E-value=7.6e-22 Score=188.85 Aligned_cols=115 Identities=29% Similarity=0.349 Sum_probs=98.5
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+.....++|++.+..+.+++||++|+. ..||||+|||++|+++++. +.|..++|||||||||
T Consensus 169 a~~~~vi~Vga~~~~~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~V 230 (306)
T 4h6w_A 169 ASLPTVLAVGAMDDQGKPVDFSNWGDA-----YQKQGILAPGKDILGAKPN-------------GGTIRLSGTSFATPIV 230 (306)
T ss_dssp TTSTTCEEEEEECTTSCBCSSSCBCHH-----HHHHEEEEECSSEEEECTT-------------SCEEEECSHHHHHHHH
T ss_pred ccCCcceEEEEecCCCCccccccccCC-----cCcceeecCCcCcccccCC-------------CceeccCCCcchhHHH
Confidence 445667789999999999999999964 3688999999999999876 6799999999999999
Q ss_pred HHHHHHHHhh----CCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 158 TGAAAFIRSV----HRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 158 AG~aALl~~~----~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
||++|||+++ +|.++|++||++|++||++++..+ ......||+|+||+.+|++
T Consensus 231 aG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 231 SGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---------CSCGGGGTTCBCCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCCCCcceeecCHHHHHH
Confidence 9999999864 699999999999999999764321 1233468999999999997
No 17
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=99.84 E-value=1.6e-21 Score=188.25 Aligned_cols=109 Identities=30% Similarity=0.422 Sum_probs=96.4
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+..+..++|++.+..+.++.||++|| +|+|||++|+++++. +.|..++|||||||||
T Consensus 196 a~~~~vi~Vga~~~~~~~~~~S~~g~----------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~v 252 (320)
T 2z30_A 196 AAYPEVIAVGAIDSNDNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHV 252 (320)
T ss_dssp TTSTTEEEEEEECTTSCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHH
T ss_pred ccCCCeEEEEeeCCCCCcCcccCCCC----------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHH
Confidence 34566788998888999999999997 789999999999876 6899999999999999
Q ss_pred HHHHHHHHhhC-------------CCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCc
Q 040558 158 TGAAAFIRSVH-------------RRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNP 220 (367)
Q Consensus 158 AG~aALl~~~~-------------p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~ 220 (367)
||++|||+|++ |.+++.+||++|++||.++.. +.++..||+|+||+.+|++.
T Consensus 253 aG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~-----------~g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 253 SGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP-----------TGWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSS-----------SSSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCCC-----------CCCCCCcCCceeCHHHHHHH
Confidence 99999999999 999999999999999997632 23567799999999999873
No 18
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=99.83 E-value=3.6e-21 Score=186.84 Aligned_cols=117 Identities=26% Similarity=0.408 Sum_probs=98.3
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+..+..++|++.+..+.++.||++|+ ||||+|||++|+++++.... ......|..++|||||||||
T Consensus 217 a~~~~vi~Vga~~~~~~~~~~S~~g~--------~~di~ApG~~i~s~~~~~~~------~~~~~~~~~~sGTS~AaP~v 282 (340)
T 3lpc_A 217 TSCNNVLSVGATTSRGIRASFSNYGV--------DVDLAAPGQDILSTVDSGTR------RPVSDAYSFMAGTSMATPHV 282 (340)
T ss_dssp TTSSSCEEEEEECTTSSBCTTCCBST--------TCCEEEECSSEEEEEESCSS------SCCSEEEEEECSHHHHHHHH
T ss_pred ccCCceEEEecCCCCCCcCCCCCCCC--------CceEEecCCCeecccCCCCc------CCCCCcceecccHhHHHHHH
Confidence 34556778998899999999999997 45999999999999876331 11125699999999999999
Q ss_pred HHHHHHHHhh-C---CCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCc
Q 040558 158 TGAAAFIRSV-H---RRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNP 220 (367)
Q Consensus 158 AG~aALl~~~-~---p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~ 220 (367)
||++|||+|+ + |.+++++||++|++||+++. ...+..+|+|+||+.+|++.
T Consensus 283 aG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~------------~~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 283 SGVAALVISAANSVNKNLTPAELKDVLVSTTSPFN------------GRLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCS------------SCCSSCCCSSBCCHHHHHHH
T ss_pred HHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCC------------CCCCCCcccceecHHHHHHH
Confidence 9999999998 5 99999999999999999652 12456899999999999974
No 19
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=99.83 E-value=6.1e-21 Score=180.80 Aligned_cols=107 Identities=32% Similarity=0.380 Sum_probs=94.1
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++|+.. ||+|||++|+++++. +.|..++||||||||
T Consensus 172 Pa~~~~vi~Vga~~~~~~~~~fS~~G~~~--------dv~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 230 (279)
T 1thm_A 172 PAYYSNAIAVASTDQNDNKSSFSTYGSWV--------DVAAPGSSIYSTYPT-------------STYASLSGTSMATPH 230 (279)
T ss_dssp TTTSTTEEEEEEECTTSCBCTTCCCCTTC--------CEEEECSSEEEEETT-------------TEEEEECSHHHHHHH
T ss_pred cccCCCeEEEEEeCCCCCcCCcCCCCCce--------EEEEcCCCeEEEeCC-------------CCEEEcccHHHHHHH
Confidence 35566778899999999999999999854 999999999999876 689999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
|||++||| ++|.+++++||++|++||+++... ...||+|+||+.+|++
T Consensus 231 VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-------------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 231 VAGVAGLL--ASQGRSASNIRAAIENTADKISGT-------------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp HHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------------TTTBSSEECCHHHHHH
T ss_pred HHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------------CccccCCeeCHHHHhc
Confidence 99999999 579999999999999999976421 1468999999999985
No 20
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=99.83 E-value=1.1e-21 Score=186.03 Aligned_cols=115 Identities=23% Similarity=0.276 Sum_probs=97.0
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+..+..++|++.+..+.++.||+||+. ..||||+|||++|+++++. +.|..++|||||||||
T Consensus 156 a~~~~vi~Vga~~~~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~v 217 (282)
T 3zxy_A 156 AALPAVLAVGAMDDHGHPLDFSNWGST-----YEQQGILAPGEDILGAKPG-------------GGTERLSGTAFATPIV 217 (282)
T ss_dssp TTSTTCEEEEEECTTSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT-------------SCEEEECSHHHHHHHH
T ss_pred cccceeEEEEEEcCCCccccccCCCCC-----ccccceeccCcceeeecCC-------------CceeecCCCcccchHH
Confidence 455677889999999999999999974 3688999999999999876 6799999999999999
Q ss_pred HHHHHHHHhhC----CCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 158 TGAAAFIRSVH----RRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 158 AG~aALl~~~~----p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
||++|||++++ |.+++++||++|++||++++. ..+.....+|+|+||+.+|++
T Consensus 218 aG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~---------~~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 218 SGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD---------DAPEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------------CGGGTTCBCCHHHHHH
T ss_pred HHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC---------CCCCccCceeeeEeCHHHHHH
Confidence 99999999875 789999999999999987642 123345679999999999987
No 21
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=99.83 E-value=8e-21 Score=180.09 Aligned_cols=107 Identities=34% Similarity=0.403 Sum_probs=93.8
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++|+. |||+|||++|+++++. +.|..++||||||||
T Consensus 173 Pa~~~~vi~Vga~~~~~~~~~~S~~G~~--------~dv~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 231 (280)
T 1dbi_A 173 PASYENVIAVGAVDQYDRLASFSNYGTW--------VDVVAPGVDIVSTITG-------------NRYAYMSGTSMASPH 231 (280)
T ss_dssp --CCTTSEEEEEECTTSCBCTTBCCSTT--------CCEEEECSSEEEEETT-------------TEEEEECSHHHHHHH
T ss_pred ccccCCeEEEEeeCCCCCcCCCCCCCCC--------ceEEEecCCeEeecCC-------------CCEEEccCHHHHHHH
Confidence 4566778899999999999999999985 4999999999999875 689999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
|||++|||++ |.+++.+||++|++||+++.. ....||+|+||+.+|++
T Consensus 232 vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 232 VAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp HHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-------------BTTTBSSEECCHHHHHT
T ss_pred HHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-------------CCCcccCCEECHHHHhc
Confidence 9999999987 899999999999999997632 23569999999999986
No 22
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=99.82 E-value=6.1e-21 Score=184.80 Aligned_cols=109 Identities=29% Similarity=0.358 Sum_probs=94.9
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++||. |||+|||++|+++++. +.|..++||||||||
T Consensus 197 Pa~~~~vi~Vga~~~~~~~~~fS~~G~~--------~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 255 (327)
T 2x8j_A 197 PAAYNEVIAVGAVDFDLRLSDFTNTNEE--------IDIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPH 255 (327)
T ss_dssp TTTSTTSEEEEEECTTCCBSCC---CCC--------CSEEEECSSEEEECST-------------TCEEEEESGGGTHHH
T ss_pred cccCCCEEEEEEECCCCCCCCccCCCCC--------ceEecCcCceEeecCC-------------CCEEeecCHHHHHHH
Confidence 3556677899999999999999999984 5999999999999875 679999999999999
Q ss_pred HHHHHHHHHhh-----CCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcC
Q 040558 157 VTGAAAFIRSV-----HRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 157 VAG~aALl~~~-----~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
|||++|||+|+ +|.+++.+||++|++||+++. .++..+|+|+||+.+|++
T Consensus 256 VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g-------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 256 VAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG-------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS-------------SCHHHHTTCEECTTHHHH
T ss_pred HHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC-------------CCCCceeeeEECHHHHHH
Confidence 99999999999 999999999999999999652 246679999999999998
No 23
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=99.82 E-value=8.7e-21 Score=192.01 Aligned_cols=112 Identities=28% Similarity=0.324 Sum_probs=98.8
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCcc----------------------EEEeecCCCCCCCC
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVA----------------------ILAAIVPKVNAGSF 135 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~----------------------I~sa~~~~~~~~~~ 135 (367)
+..+..++|++.+..+.+++||++||.. |||+|||++ |+++++.
T Consensus 332 a~~~~vitVgA~~~~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~------- 397 (471)
T 3t41_A 332 ASMDNVVTVGSTDQKSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN------- 397 (471)
T ss_dssp TTSTTEEEEEEECTTSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------
T ss_pred ccCCCeEEEEeeCCCCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCC-------
Confidence 4556778999999999999999999963 699999987 8888875
Q ss_pred CCCCCCCceEEeCccccchHHHHHHHHHHHhhCC-CCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccCh
Q 040558 136 PIGKKPAGYAIKSGTSMACPHVTGAAAFIRSVHR-RWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISP 214 (367)
Q Consensus 136 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p-~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~ 214 (367)
+.|..++|||||||||||++|||+|++| .++|++||++|++||.... ..++..||+|+||+
T Consensus 398 ------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~------------~~~~~~~G~G~vd~ 459 (471)
T 3t41_A 398 ------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKN------------NKPFSRYGHGELDV 459 (471)
T ss_dssp ------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCS------------CCCHHHHTTCBBCH
T ss_pred ------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCC------------CCCcCccccChhCH
Confidence 6799999999999999999999999999 8999999999999998642 14567899999999
Q ss_pred hhhcCcC
Q 040558 215 LKALNPG 221 (367)
Q Consensus 215 ~~A~~~~ 221 (367)
.+|++..
T Consensus 460 ~~Al~~a 466 (471)
T 3t41_A 460 YKALNVA 466 (471)
T ss_dssp HHHTTTT
T ss_pred HHHHHHH
Confidence 9999843
No 24
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=99.80 E-value=6.3e-20 Score=191.18 Aligned_cols=134 Identities=24% Similarity=0.209 Sum_probs=98.0
Q ss_pred ccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeec-------CCCCCC--------------CCCCCCC
Q 040558 82 PTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIV-------PKVNAG--------------SFPIGKK 140 (367)
Q Consensus 82 ~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~-------~~~~~~--------------~~~~~~~ 140 (367)
..++|++.+..+.++.||++||.. ||+|||++|.+..+ ...... ....+..
T Consensus 254 ~vItVgA~~~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~ 325 (600)
T 2oxa_A 254 WNLVVSALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDAS 325 (600)
T ss_dssp SEEEEEEECTTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTT
T ss_pred eeEEEecccCCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCC
Confidence 467899999999999999999986 99999998543322 110000 0000111
Q ss_pred CCceEEeCccccchHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCC--------------------CCCCC
Q 040558 141 PAGYAIKSGTSMACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLK--------------------NNAGS 200 (367)
Q Consensus 141 ~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~--------------------~~~~~ 200 (367)
.+.|..++|||||||||||++|||+|++|+|++++||++|++||++++..+.++. .....
T Consensus 326 ~~~y~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g 405 (600)
T 2oxa_A 326 CDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAG 405 (600)
T ss_dssp CCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTS
T ss_pred cccccccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCC
Confidence 2348999999999999999999999999999999999999999998765432211 01111
Q ss_pred CCCCCCcccCccChhhhcCcCcc
Q 040558 201 TASPHETGVGEISPLKALNPGLV 223 (367)
Q Consensus 201 ~~~~~~~G~G~in~~~A~~~~lv 223 (367)
...+..||||+||+.+|++...-
T Consensus 406 ~~~~~~~G~G~vda~~Av~~A~~ 428 (600)
T 2oxa_A 406 MWFSPTYGFGLIDVNKALELAAN 428 (600)
T ss_dssp CEEBTTTBTCBCCHHHHHHHHTT
T ss_pred ccccccCCCchhhHHHHHHHHHh
Confidence 22457899999999999985443
No 25
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=99.77 E-value=3.3e-19 Score=180.67 Aligned_cols=128 Identities=12% Similarity=0.101 Sum_probs=100.6
Q ss_pred cccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHHHHH
Q 040558 81 LPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHVTGA 160 (367)
Q Consensus 81 ~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~ 160 (367)
...++|++.+..+.++.||++||.. ....+|...+||.+|+++.+.. ..|..++|||||||||||+
T Consensus 205 ~~vItVgA~~~~g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~ 270 (471)
T 1p8j_A 205 IYTLSISSATQFGNVPWYSEACSST--LATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGI 270 (471)
T ss_dssp TTEEEEEEECTTSCCCTTCCBCTTC--CEEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHH
T ss_pred CceEEEecccCCCCcccccCCCCcc--eEEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhH
Confidence 4567899988999999999999976 3344566666778999997642 4689999999999999999
Q ss_pred HHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCCCCCCCCCCCCcccCccChhhhcCcCc
Q 040558 161 AAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKNNAGSTASPHETGVGEISPLKALNPGL 222 (367)
Q Consensus 161 aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~l 222 (367)
+|||+|++|+|++++||.+|++||++.+.....+.........+..||+|+||+.+|++...
T Consensus 271 aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 271 IALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred HHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 99999999999999999999999998754322221111112245689999999999998433
No 26
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=99.76 E-value=1.4e-18 Score=165.10 Aligned_cols=90 Identities=31% Similarity=0.364 Sum_probs=82.8
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++||.. ||+|||++|+++++. +.|..++||||||||
T Consensus 167 Pa~~~~vi~Vga~~~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 225 (284)
T 1sh7_A 167 PARVPSGVTVGSTTSSDSRSSFSNWGSCV--------DLFAPGSQIKSAWYD-------------GGYKTISGTSMATPH 225 (284)
T ss_dssp TTTCTTSEEEEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTT-------------SSEEEECSHHHHHHH
T ss_pred cccCCCeEEEEEecCCCCcCcccCCCCcc--------EEEeccCCeEEecCC-------------CCEEEccChHHHHHH
Confidence 45567778999999999999999999864 999999999999875 679999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhccccc
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVY 187 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~ 187 (367)
|||++|||++++|++++++||++|++||++.
T Consensus 226 vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (284)
T 1sh7_A 226 VAGVAALYLQENNGLTPLQLTGLLNSRASEN 256 (284)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 9999999999999999999999999999865
No 27
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=99.76 E-value=6e-19 Score=180.17 Aligned_cols=121 Identities=13% Similarity=0.138 Sum_probs=97.1
Q ss_pred ccccccccCCCCccccCCCCCCCCCCCCCcCCceee----cCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 82 PTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTA----PGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 82 ~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
..++|++.+..+.+++||++|+.. |++| ||.+|+++..+. ..|..++|||||||||
T Consensus 219 ~vI~VgA~~~~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~V 278 (503)
T 2id4_A 219 YSITIGAIDHKDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLA 278 (503)
T ss_dssp TEEEEEEECTTSCCCTTCCCCTTE--------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHH
T ss_pred CEEEEEeeCCCCCcCCcCCCCCcc--------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhh
Confidence 467888888899999999999976 8887 899999995431 6799999999999999
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHhhccccccCC-CCCCCCCCCCCCCCCCcccCccChhhhcCcCc
Q 040558 158 TGAAAFIRSVHRRWSSSIIKSALMTTATVYDNT-GKPLKNNAGSTASPHETGVGEISPLKALNPGL 222 (367)
Q Consensus 158 AG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~-g~~~~~~~~~~~~~~~~G~G~in~~~A~~~~l 222 (367)
||++|||+|++|+|++++||.+|+.||++++.. ...+............||+|+||+.+|++...
T Consensus 279 AG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 279 AGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHh
Confidence 999999999999999999999999999977542 11111111112235679999999999998433
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=99.75 E-value=9.2e-19 Score=165.90 Aligned_cols=88 Identities=27% Similarity=0.294 Sum_probs=80.9
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+..+..++|++.+..+.++.||++||.. ||+|||++|+++++. +.|..++|||||||||
T Consensus 172 a~~~~vi~Vga~~~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~V 230 (279)
T 2pwa_A 172 ASEPSVCTVGASDRYDRRSSFSNYGSVL--------DIFGPGTDILSTWIG-------------GSTRSISGTSMATPHV 230 (279)
T ss_dssp TTCTTSEEEEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHH
T ss_pred ccCCcEEEEEEecCCCCcCCcCCCCCcc--------eEEEecCCeEEeecC-------------CCEEEcCChHHHHHHH
Confidence 4456778899999999999999999854 999999999999976 5799999999999999
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHhhccccc
Q 040558 158 TGAAAFIRSVHRRWSSSIIKSALMTTATVY 187 (367)
Q Consensus 158 AG~aALl~~~~p~~s~~~ik~~L~~tA~~~ 187 (367)
||++|||+++ |.+++.+||++|++||++.
T Consensus 231 aG~aAll~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 231 AGLAAYLMTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp HHHHHHHHHT-TSCCTTTHHHHHHHHSEES
T ss_pred HHHHHHHHhC-CCCCHHHHHHHHHHhCccc
Confidence 9999999999 9999999999999999864
No 29
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=99.75 E-value=1.1e-17 Score=174.10 Aligned_cols=134 Identities=24% Similarity=0.227 Sum_probs=97.4
Q ss_pred ecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccE-------EEeecCCCCCC--------------CCCCC
Q 040558 80 ILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAI-------LAAIVPKVNAG--------------SFPIG 138 (367)
Q Consensus 80 i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I-------~sa~~~~~~~~--------------~~~~~ 138 (367)
....++|++.+..+.++.||++|+.. +++|||.++ ..+..++.... .....
T Consensus 252 ~~~~IsVgA~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~ 323 (600)
T 3hjr_A 252 NFWNLVVSALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLD 323 (600)
T ss_dssp SSSEEEEEEECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTC
T ss_pred cCcceEEeeecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccC
Confidence 34467888899999999999999987 899999763 22221111000 00011
Q ss_pred CCCCceEEeCccccchHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccccCCCCCCCC--------------------CC
Q 040558 139 KKPAGYAIKSGTSMACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVYDNTGKPLKN--------------------NA 198 (367)
Q Consensus 139 ~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~~~g~~~~~--------------------~~ 198 (367)
.....|..++|||||||||||++|||+|+||+|+++|||++|++||++++....|+.. ..
T Consensus 324 ~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~ 403 (600)
T 3hjr_A 324 ASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNA 403 (600)
T ss_dssp TTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECT
T ss_pred CCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCccccc
Confidence 2235688999999999999999999999999999999999999999998776554210 00
Q ss_pred CCCCCCCCcccCccChhhhcCcC
Q 040558 199 GSTASPHETGVGEISPLKALNPG 221 (367)
Q Consensus 199 ~~~~~~~~~G~G~in~~~A~~~~ 221 (367)
........||+|+||+.+|++..
T Consensus 404 aG~~~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 404 AGMWFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp TSCEEBTTTBTCBCCHHHHHHHH
T ss_pred CCceEccccCCceecHHHHHHHh
Confidence 01112456899999999999743
No 30
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=99.74 E-value=2.2e-18 Score=162.74 Aligned_cols=93 Identities=29% Similarity=0.327 Sum_probs=83.8
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
++..+..++|++.+..+.++.||++||.. ||+|||++|++++.... ..|..++||||||||
T Consensus 167 Pa~~~~vi~Vga~~~~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~ 227 (276)
T 4dzt_A 167 PARVAEALTVGATTSSDARASFSNYGSCV--------DLFAPGASIPSAWYTSD-----------TATQTLNGTSMATPH 227 (276)
T ss_dssp TTTCTTSEEEEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTTSS-----------SCEEEECSHHHHHHH
T ss_pred cccCCCEEEEEEECCCCCcCCcCCCCCCc--------eEEeCCCCeEccccCCC-----------CceEEeeEHHHHHHH
Confidence 34566778899999999999999999965 99999999999987632 579999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhcccccc
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVYD 188 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~~ 188 (367)
|||++|||+|++|++++++||++|++||++..
T Consensus 228 vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 228 VAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 99999999999999999999999999999753
No 31
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=99.73 E-value=4.3e-18 Score=161.09 Aligned_cols=91 Identities=30% Similarity=0.324 Sum_probs=81.9
Q ss_pred eeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHH
Q 040558 78 ATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHV 157 (367)
Q Consensus 78 ~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~V 157 (367)
+..+..++|++.+..+.++.||++||. |||+|||++|+++++... +.|..++|||||||||
T Consensus 170 a~~~~vi~Vga~~~~~~~~~~S~~G~~--------~di~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~v 230 (278)
T 2b6n_A 170 ARAADAITVGSTTSNDSRSSFSNYGTC--------LDIYAPGSSITSSWYTSN-----------SATNTISGTSMASPHV 230 (278)
T ss_dssp TTCTTSEEEEEECTTSBBCTTCCBSTT--------CCEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHH
T ss_pred ccCCCeEEEEeeCCCCCcCCcCCCCCC--------CeEEeCCCCeECcccCCC-----------CCEEEeCcHHHHHHHH
Confidence 456677889999999999999999985 499999999999987532 6799999999999999
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHhhccccc
Q 040558 158 TGAAAFIRSVHRRWSSSIIKSALMTTATVY 187 (367)
Q Consensus 158 AG~aALl~~~~p~~s~~~ik~~L~~tA~~~ 187 (367)
||++|||++++|.+++.+||++|++||++.
T Consensus 231 aG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 231 AGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 999999999999999999999999999864
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=99.70 E-value=1.1e-17 Score=158.17 Aligned_cols=89 Identities=28% Similarity=0.334 Sum_probs=81.3
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHH
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPH 156 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 156 (367)
.+..+..++|++.+..+.++.||++||.. ||+|||++|+++++. +.|..++||||||||
T Consensus 172 Pa~~~~vi~Vga~~~~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~ 230 (279)
T 3f7m_A 172 PASEPTVCTVGATDSNDVRSTFSNYGRVV--------DIFAPGTSITSTWIG-------------GRTNTISGTSMATPH 230 (279)
T ss_dssp TTTCTTSEEEEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECGG-------------GCEEEECSHHHHHHH
T ss_pred CCCCCCEEEEeecCCCCCCCCCCCCCCCC--------eEEECCCCeEeecCC-------------CCEEEeeEHHHHHHH
Confidence 34556778899999999999999999854 999999999999876 679999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHhhccccc
Q 040558 157 VTGAAAFIRSVHRRWSSSIIKSALMTTATVY 187 (367)
Q Consensus 157 VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~ 187 (367)
|||++|||++++|. ++++||.+|++||++.
T Consensus 231 vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 231 IAGLAAYLFGLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp HHHHHHHHHHHTCC-CTTTHHHHHHHHSEES
T ss_pred HHHHHHHHHHhCCC-CHHHHHHHHHHhcccc
Confidence 99999999999999 9999999999999864
No 33
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=99.68 E-value=3e-17 Score=167.56 Aligned_cols=92 Identities=23% Similarity=0.226 Sum_probs=81.1
Q ss_pred ceeecccccccccCCCCcccc----CCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCcccc
Q 040558 77 TATILPTVDVQRYKPAPVVAY----FSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSM 152 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~----fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 152 (367)
++..+..++|++.+..+.++. ||++|+ +|||+|||++|+++++... ..|..++||||
T Consensus 175 PAs~~~VItVGA~d~~g~~a~~s~~fSn~G~--------~vDI~APG~~I~St~~~~~-----------~~y~~~SGTSm 235 (546)
T 2qtw_B 175 PASAPEVITVGATNAQDQPVTLGTLGTNFGR--------CVDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQ 235 (546)
T ss_dssp TTTCTTSEEEEEECTTSCBCEETTEECCBST--------TCCEEEECSSEEEECTTST-----------TCEEEECSHHH
T ss_pred cccCCCEEEEEEecCCCCcccccCCcCCCCC--------cceEEecCccEEeeccCCC-----------CcEeeeCcCcH
Confidence 355677788998888888888 899997 4599999999999987632 57999999999
Q ss_pred chHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccc
Q 040558 153 ACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVY 187 (367)
Q Consensus 153 AaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~ 187 (367)
|||||||++|||++++|+|+++|||++|+++|.+.
T Consensus 236 AAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 236 AAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999754
No 34
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=99.63 E-value=2.3e-17 Score=172.54 Aligned_cols=92 Identities=23% Similarity=0.226 Sum_probs=0.0
Q ss_pred ceeecccccccccCCCCcccc----CCCCCCCCCCCCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCcccc
Q 040558 77 TATILPTVDVQRYKPAPVVAY----FSSRGPGELTENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSM 152 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~----fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 152 (367)
++..+..++|++.+..+.++. ||+||+ ||||+|||++|+++++... ..|..++||||
T Consensus 327 PA~~~~vItVGA~d~~~~~a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~~-----------~~y~~~SGTSm 387 (692)
T 2p4e_P 327 PASAPEVITVGATNAQDQPVTLGTLGTNFGR--------CVDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQ 387 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCEEEEEEEcCCCCccccccccCCCCC--------ceeEEecCCcEEeeccCCC-----------CceEeccchHH
Confidence 456677889998888888888 899997 4699999999999997632 57999999999
Q ss_pred chHHHHHHHHHHHhhCCCCCHHHHHHHHhhccccc
Q 040558 153 ACPHVTGAAAFIRSVHRRWSSSIIKSALMTTATVY 187 (367)
Q Consensus 153 AaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~~~ 187 (367)
|||||||++|||++++|+|++++||++|+++|.+.
T Consensus 388 AAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 388 AAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp -----------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999754
No 35
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.02 E-value=1.2e-10 Score=103.87 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=62.2
Q ss_pred CceeEEEEEeCCCCC-ccHHHH-HHHHHcCceEEEEEecCCCCC---CC---CCCcccceeecccccceeeEEeecccCC
Q 040558 4 VAGKIIVCVDDDPTV-PRKIKK-LVAEDADAKGLILIDEDYEKH---VP---FDSGIFPLSEVGSVAGFQIIHYINSTKN 75 (367)
Q Consensus 4 V~GKIvl~~~g~~~~-~~~~~K-~~a~~aGa~gvi~~n~~~~~~---~~---~~~~~~p~~~i~~~~g~~l~~~~~~~~~ 75 (367)
.+||||||+|| . |+|.+| .+|+++||+|+||||+. ..+ .. .....||+++|+.++|+.|++++.++..
T Consensus 103 ~~gkIaLV~RG---~~CsF~~Kv~nAq~aGA~avIIyNn~-~~g~~~~~m~~~~~~~IPsv~Is~~~G~~L~~~L~~G~~ 178 (194)
T 3icu_A 103 QVSWLALIQRG---GGCTFADKIHLAYERGASGAVIFNFP-GTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQ 178 (194)
T ss_dssp BCCEEEEEESC---TTCCHHHHHHHHHHTTCSEEEEECCT-TCTTCCCCCCCTTCCSSEEEEECHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEECC---CCcCHHHHHHHHHHCCCcEEEEEeCC-CCCCceeeecCCCCCceeEEEECHHHHHHHHHHHHCCCe
Confidence 47899999999 8 999999 99999999999999974 221 11 2335799999999999999999998877
Q ss_pred Cceeecc
Q 040558 76 PTATILP 82 (367)
Q Consensus 76 ~~~~i~~ 82 (367)
++++|..
T Consensus 179 Vtvti~v 185 (194)
T 3icu_A 179 VTMVIEV 185 (194)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 6666643
No 36
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=98.87 E-value=7.9e-10 Score=113.80 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=61.2
Q ss_pred CCCcCCceeecC---ccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHHHHHHHHHHhhCCC----CCHHHHHHHH
Q 040558 108 ENILKPDVTAPG---VAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHVTGAAAFIRSVHRR----WSSSIIKSAL 180 (367)
Q Consensus 108 ~~~~KPDi~APG---~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~----~s~~~ik~~L 180 (367)
.++.+|||+||| .++. .+.. +.|..++|||||||||||++|||.++++. |+|.. .++
T Consensus 434 ~gR~~PDVsA~a~p~~~~~-v~~~-------------g~~~~~~GTS~AaP~vAGv~ALl~~~~g~~lG~~np~L-Y~~- 497 (552)
T 1t1e_A 434 SGRGVPDVAGNADPATGYE-VVID-------------GETTVIGGTAAVAPLFAALVARINQKLGKPVGYLNPTL-YQL- 497 (552)
T ss_dssp CCCEECSEEEECCGGGCEE-EEET-------------TEEEEEESGGGHHHHHHHHHHHHHHHHTSCCCCCHHHH-TTS-
T ss_pred CCCCCCceecccCCCCCeE-EEeC-------------CeEEeccccchhhHHHHHHHHHHhhhccCCCCCccHHH-Hhc-
Confidence 467899999995 4543 3433 67999999999999999999999998642 33332 211
Q ss_pred hhcc-ccccCCCCCC-----CCCCCCCCCCCCcccCccChhhhcC
Q 040558 181 MTTA-TVYDNTGKPL-----KNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 181 ~~tA-~~~~~~g~~~-----~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
...+ .++. .|..- ........++...|+|.+|..++++
T Consensus 498 ~~~~f~Dit-~G~n~~~~~~~~~~a~~GwD~~TGlGtpn~~~l~~ 541 (552)
T 1t1e_A 498 PPEVFHDIT-EGNNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQ 541 (552)
T ss_dssp CGGGEECCC-SCBCCCSSSSCCSBCCSSCBTTTBTCEECHHHHHH
T ss_pred Cccceeecc-cCCCCCcCCCCCcCCCCCCCCCccccccCHHHHHH
Confidence 0111 1111 11000 0112345678889999999998887
No 37
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=98.82 E-value=2.2e-09 Score=105.34 Aligned_cols=107 Identities=22% Similarity=0.168 Sum_probs=69.7
Q ss_pred cCCCCCCCCC--------CCCCcCCcee---ecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHHHHHHHHHH
Q 040558 97 YFSSRGPGEL--------TENILKPDVT---APGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHVTGAAAFIR 165 (367)
Q Consensus 97 ~fSs~Gp~~~--------~~~~~KPDi~---APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 165 (367)
.||+++|... ..++.+|||+ |||.+++..+ . +.|..++|||||||||||++|||+
T Consensus 236 GfS~~~~~P~yQ~~~~~~~~gR~~PDVsa~aapg~~~~~~~-~-------------g~~~~~~GTS~AaP~vAGi~ALl~ 301 (372)
T 1ga6_A 236 GYSVYESKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYN-Y-------------GQLQQIGGTSLASPIFVGLWARLQ 301 (372)
T ss_dssp EEEEEEECCGGGGGSTTSCSEEEECSEEEECCGGGCEEEEE-T-------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCcccccccccCCCCccCCceecccCCCCCEEEEe-C-------------CcEEeccccchHHHHHHHHHHHHH
Confidence 4777765421 1246789999 9999987654 2 578999999999999999999999
Q ss_pred hhCCC----CCHHHHHHHHhh-c-c-ccccCCCCCC---CCCCCCCCCCCCcccCccChhhhcC
Q 040558 166 SVHRR----WSSSIIKSALMT-T-A-TVYDNTGKPL---KNNAGSTASPHETGVGEISPLKALN 219 (367)
Q Consensus 166 ~~~p~----~s~~~ik~~L~~-t-A-~~~~~~g~~~---~~~~~~~~~~~~~G~G~in~~~A~~ 219 (367)
|+++. +.|.. .++-.. . + .++. .|... ........++...|+|.+|..++++
T Consensus 302 ~~~~~~lG~~np~L-Y~~a~~~~~~f~Dit-~G~n~~~~~g~~a~~GwD~~TGlGtpn~~~l~~ 363 (372)
T 1ga6_A 302 SANSNSLGFPAASF-YSAISSTPSLVHDVK-SGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSA 363 (372)
T ss_dssp HHTTTCCCCCHHHH-HHHHHHCGGGEECCC-SCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHH
T ss_pred hcCCCCcCccCHHH-HhhcccCCcceeecc-cCCCCCCCCCCCCCCCCCCCccCchhhHHHHHH
Confidence 98753 44443 332211 1 1 1111 11100 0112245678889999999998876
No 38
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=97.87 E-value=4.8e-06 Score=82.71 Aligned_cols=64 Identities=16% Similarity=0.180 Sum_probs=54.8
Q ss_pred CCceeEEEEEeCCCCCccHHHH-HHHHHcCceEEEEEecCCCCCCC-----CCCcccceeecccccceeeEEee
Q 040558 3 KVAGKIIVCVDDDPTVPRKIKK-LVAEDADAKGLILIDEDYEKHVP-----FDSGIFPLSEVGSVAGFQIIHYI 70 (367)
Q Consensus 3 ~V~GKIvl~~~g~~~~~~~~~K-~~a~~aGa~gvi~~n~~~~~~~~-----~~~~~~p~~~i~~~~g~~l~~~~ 70 (367)
+|+|||||++|| .|.|.+| .+|+++||+|+|++++. .+... .....+|.+.|+.++++.|++.+
T Consensus 112 dv~GkIvlv~~g---~~~~~~k~~~A~~~GA~gvIi~~~~-~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l 181 (421)
T 2ek8_A 112 DLNGKIALIQRG---NISFADKVRNAAKQGAKAVIIYNNT-DGKLNGTLGGSDASFVAAVGITKQEGDALAANL 181 (421)
T ss_dssp CCTTSEEEEECC---SSCHHHHHHHHHHTTCSEEEEECSS-SSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHH
T ss_pred CcCceEEEEeCC---CCCHHHHHHHHHHCCCeEEEEEeCC-CcccccccCCCCCCCccEEEeCHHHHHHHHHHh
Confidence 799999999999 8999999 99999999999999986 43322 12457899999999999998877
No 39
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=97.73 E-value=1.6e-05 Score=79.48 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=56.5
Q ss_pred CCCceeEEEEEeCCCCCcc---------HHHH-----HHHHHcCceEEEEEecCCCCC--CC--------CCCcccceee
Q 040558 2 KKVAGKIIVCVDDDPTVPR---------KIKK-----LVAEDADAKGLILIDEDYEKH--VP--------FDSGIFPLSE 57 (367)
Q Consensus 2 ~~V~GKIvl~~~g~~~~~~---------~~~K-----~~a~~aGa~gvi~~n~~~~~~--~~--------~~~~~~p~~~ 57 (367)
.+|+|||||++++ .|. +..| .+|+++||+|+|++|+. ... .. .....+|++.
T Consensus 125 ~dvkGKIVlv~~~---~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~-~~~~~~~~tg~~~~~~~~~~IP~~~ 200 (444)
T 3iib_A 125 GSLNDKIAFIDAK---TERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIG-TDHDRMAHTGMMRYEEGVTAIPAAA 200 (444)
T ss_dssp TTTTTCEEEECCC---CCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSC-SCCSSCCCCCBCCCCTTSCCCCEEE
T ss_pred cccCccEEEEeCC---CCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccC-CcccccccCCccccCCCCCCCCeEE
Confidence 5899999999998 674 4455 36899999999999875 321 11 1235789999
Q ss_pred cccccceeeEEeecccCCCceeec
Q 040558 58 VGSVAGFQIIHYINSTKNPTATIL 81 (367)
Q Consensus 58 i~~~~g~~l~~~~~~~~~~~~~i~ 81 (367)
|+.++|+.|++.+..+....+++.
T Consensus 201 Is~~da~~L~~~l~~g~~~~v~l~ 224 (444)
T 3iib_A 201 ISNPDADLINAMLKRDKEVVISLE 224 (444)
T ss_dssp ECHHHHHHHHHHHTTTCCCEEEEE
T ss_pred ecHHHHHHHHHHHhCCCCeEEEEE
Confidence 999999999988877654444443
No 40
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=97.61 E-value=2.5e-05 Score=81.54 Aligned_cols=65 Identities=17% Similarity=0.233 Sum_probs=52.0
Q ss_pred CCceeEEEEEeCCCCCccHHHH-HHHHHcCceEEEEEecCCCC-CC-------------------CC-------------
Q 040558 3 KVAGKIIVCVDDDPTVPRKIKK-LVAEDADAKGLILIDEDYEK-HV-------------------PF------------- 48 (367)
Q Consensus 3 ~V~GKIvl~~~g~~~~~~~~~K-~~a~~aGa~gvi~~n~~~~~-~~-------------------~~------------- 48 (367)
+|+|||||+++| .|.+.+| ++|+++||+|+|+|++. .+ +. ..
T Consensus 129 dv~GkIvlv~~g---~~~~~~K~~~A~~~GA~gvii~~~~-~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~ 204 (640)
T 3kas_A 129 PVNGSIVIVRAG---KITFAEKVANAESLNAIGVLIYMDQ-TKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPS 204 (640)
T ss_dssp CCTTSEEEEESC---SSCHHHHHHHHHTTTCSEEEEECCT-TTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCC
T ss_pred ccCCcEEEEecC---CCCHHHHHHHHHHCCCeEEEEEecc-ccccccccccccccccccCCCCCCCCCcccccccccccc
Confidence 799999999999 8999999 99999999999999975 21 10 00
Q ss_pred ---CCcccceeecccccceeeEEeec
Q 040558 49 ---DSGIFPLSEVGSVAGFQIIHYIN 71 (367)
Q Consensus 49 ---~~~~~p~~~i~~~~g~~l~~~~~ 71 (367)
....||++.|+.+++..|++.+.
T Consensus 205 ~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 205 RSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp SSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cccCCCCCCEEecCHHHHHHHHHHcc
Confidence 01257888999999998877654
No 41
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=97.15 E-value=0.00025 Score=74.75 Aligned_cols=36 Identities=28% Similarity=0.230 Sum_probs=34.1
Q ss_pred CCCceeEEEEEeCCCCCccHHHH-HHHHHcCceEEEEEec
Q 040558 2 KKVAGKIIVCVDDDPTVPRKIKK-LVAEDADAKGLILIDE 40 (367)
Q Consensus 2 ~~V~GKIvl~~~g~~~~~~~~~K-~~a~~aGa~gvi~~n~ 40 (367)
.+|+|||||++|| .|.+.+| .+|+++||+|+|||++
T Consensus 151 ~~v~GkIvlv~~G---~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 151 INCTGKIVIARYG---KIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CCCTTCEEEEECC---SSCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCeEEEEECC---CCCHhHHHHHHHHCCCEEEEEEcC
Confidence 3799999999999 8999999 9999999999999986
No 42
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=96.33 E-value=0.0032 Score=62.59 Aligned_cols=44 Identities=23% Similarity=0.254 Sum_probs=38.3
Q ss_pred ceeecccccccccCCCCccccCCCCCCCCCCCCCcCCceeecCccEEEeecC
Q 040558 77 TATILPTVDVQRYKPAPVVAYFSSRGPGELTENILKPDVTAPGVAILAAIVP 128 (367)
Q Consensus 77 ~~~i~~~~~v~~~~~~~~~a~fSs~Gp~~~~~~~~KPDi~APG~~I~sa~~~ 128 (367)
++..+..++|++.+..+.++.||++|+.. ||+|||++|+++++.
T Consensus 168 Pa~~~~vi~VgA~~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 168 PASYDSVMSVAAVDSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp TTTSTTEEEEEEECTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCeEEEEEECCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 35566788999999999999999999854 999999999999874
No 43
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=96.00 E-value=0.0029 Score=64.73 Aligned_cols=47 Identities=23% Similarity=0.186 Sum_probs=36.5
Q ss_pred CCCcCCceeecCccEEEeecCCCCCCCCCCCCCCCceEEeCccccchHHHHHHHHHHHhh
Q 040558 108 ENILKPDVTAPGVAILAAIVPKVNAGSFPIGKKPAGYAIKSGTSMACPHVTGAAAFIRSV 167 (367)
Q Consensus 108 ~~~~KPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~ 167 (367)
.++-.|||+|.|.+.+....+ ..+....|||+|||++||++|||.++
T Consensus 426 ~gR~~PDVaa~~~~~~v~~~g-------------~~~~~~gGTS~aaP~~A~~~al~n~~ 472 (544)
T 3edy_A 426 SGRAYPDVAALSDGYWVVSNR-------------VPIPWVSGTSASTPVFGGILSLINEH 472 (544)
T ss_dssp TEEEECSEEEECSSEEEEETT-------------EEEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCeecccCCEEEEECC-------------eeeeeecCcccchhHHHHHHHHHHHH
Confidence 357789999999886544321 22345899999999999999999875
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.93 E-value=0.028 Score=45.60 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=41.0
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEee
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYGK 338 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~ 338 (367)
.+.+.+++|+|+.+..|+.....| ++++|..-.+ ++||+..++|+|.+.
T Consensus 43 ~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~ 91 (122)
T 2ys4_A 43 TQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQ 91 (122)
T ss_dssp EEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCS
T ss_pred EEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcC
Confidence 677788999999988888776433 6788999998 689999999999874
No 45
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.73 E-value=0.96 Score=35.32 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCCCeEEEeecCCCcceEEEEEEEEecCCCceeEEEEEeC-CCCeEEEEccceeEEecCceEEEEEEEEEeeecCCceEE
Q 040558 268 INYPSISISKLDRHRAAETVKRTVTNVGLQNVTYISRVNA-PSGLIVKVLPQKLVFAEGVKRMSFSVSFYGKEAAGGYNF 346 (367)
Q Consensus 268 lN~psi~~~~~~~~~~~~t~~rtvtNvg~~~~ty~~~v~~-p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~~~~~~~~~ 346 (367)
++...+-++...-. ...+.+.+++|.|+.+..|+..... +.+...+++|..-.+ ++|++..++|+|.+... +.+.
T Consensus 12 ~~~~~ldFG~v~~g-~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~~--g~f~ 87 (112)
T 2e6j_A 12 FNFELLDIGKVFTG-SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSIIL--GNFE 87 (112)
T ss_dssp ESCSEEEEEEEESS-CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCCC--EEEE
T ss_pred ECcccEecEeEEEC-CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCCc--ceEE
Confidence 44444444443211 1156677889999999999983211 123347778998888 68999999999987432 2233
Q ss_pred EEEEEE
Q 040558 347 GSVTWS 352 (367)
Q Consensus 347 G~l~~~ 352 (367)
=.|++.
T Consensus 88 ~~i~v~ 93 (112)
T 2e6j_A 88 EEFLVN 93 (112)
T ss_dssp EEECEE
T ss_pred EEEEEE
Confidence 345554
No 46
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=84.95 E-value=7.5 Score=30.81 Aligned_cols=52 Identities=17% Similarity=0.058 Sum_probs=41.9
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEee
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYGK 338 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~ 338 (367)
-..+..+.|....+.+|.++++..+++++. .|..+++ ++||..++.|.+...
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~ 84 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGAD 84 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEEC
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEEC
Confidence 357788999999999999999987776653 3556777 689988888888873
No 47
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=82.34 E-value=5.4 Score=35.23 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=49.7
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEeeecC-CceEEEEEEEE--C---Cc-eE
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYGKEAA-GGYNFGSVTWS--D---NR-HS 357 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~~~~-~~~~~G~l~~~--~---~~-~~ 357 (367)
.+.+.+++|.|+.+.+++... .|.-+++...|..+ ++|++.+++|+++..... -+...+.|+.. + +. ..
T Consensus 21 ~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~~I---~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~~ 96 (220)
T 2qsv_A 21 GVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAFRL---QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKAV 96 (220)
T ss_dssp CEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEEEE---CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEEE
T ss_pred ceEEEEEEeCCCCceEEEecc-CCCceEeeeCccee---CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCcccc
Confidence 456778999999998888653 36666655555444 689999999999875543 24445666654 3 22 34
Q ss_pred EEEEEEE
Q 040558 358 VQMMFAV 364 (367)
Q Consensus 358 vr~P~~v 364 (367)
.++|+..
T Consensus 97 ~~i~v~g 103 (220)
T 2qsv_A 97 DSVMVSL 103 (220)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 4666654
No 48
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=77.71 E-value=10 Score=39.68 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=33.7
Q ss_pred eEEEEEEEEecCCCcee--EEEEEeCCCCe------EEEEccceeEEecCceEEEEEEEEEee
Q 040558 284 AETVKRTVTNVGLQNVT--YISRVNAPSGL------IVKVLPQKLVFAEGVKRMSFSVSFYGK 338 (367)
Q Consensus 284 ~~t~~rtvtNvg~~~~t--y~~~v~~p~g~------~v~v~P~~l~~~~~g~~~~~~vt~~~~ 338 (367)
..+++.+|||+|+.... -.+-+..|.+- .+.- -.++.+ ++||+++++++++..
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEE-CTTCEEEEEEEEEGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-ccccee-CCCCeEEEEEEEcHH
Confidence 36889999999985544 44444555321 1111 123344 799999999999874
No 49
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=76.15 E-value=5.8 Score=41.65 Aligned_cols=70 Identities=14% Similarity=0.138 Sum_probs=40.1
Q ss_pred CCCCeEEEeecCC--CcceEEEEEEEEecCCCc--eeEEEEEeCCCCe-----EEEEcccee-EEecCceEEEEEEEEEe
Q 040558 268 INYPSISISKLDR--HRAAETVKRTVTNVGLQN--VTYISRVNAPSGL-----IVKVLPQKL-VFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 268 lN~psi~~~~~~~--~~~~~t~~rtvtNvg~~~--~ty~~~v~~p~g~-----~v~v~P~~l-~~~~~g~~~~~~vt~~~ 337 (367)
|.|-+|...++.- .....+++.+|||+|+.. ++-.+-+..|.+- +.-.--.++ .+ ++||+++++++++.
T Consensus 598 LSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~ 676 (721)
T 2x41_A 598 LSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPV 676 (721)
T ss_dssp BCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEG
T ss_pred CCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECH
Confidence 5565555444321 012378999999999844 4444445555321 111111223 33 78999999999987
Q ss_pred e
Q 040558 338 K 338 (367)
Q Consensus 338 ~ 338 (367)
.
T Consensus 677 ~ 677 (721)
T 2x41_A 677 R 677 (721)
T ss_dssp G
T ss_pred H
Confidence 3
No 50
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=72.92 E-value=37 Score=27.65 Aligned_cols=80 Identities=11% Similarity=0.054 Sum_probs=53.0
Q ss_pred EEEEEEEEecCCCceeEEEEEeCC----CCeEEEEccceeEEecCceEEEEEEEEEeeec-----C--CceEEEEEEEE-
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAP----SGLIVKVLPQKLVFAEGVKRMSFSVSFYGKEA-----A--GGYNFGSVTWS- 352 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p----~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~~~-----~--~~~~~G~l~~~- 352 (367)
.+-+.+++|.|.-+.+|++..... ..--++++|..-++ .+|++..++|++..... . ..-..--|++.
T Consensus 45 ~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~V 123 (140)
T 3qbt_B 45 QKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLHL 123 (140)
T ss_dssp EEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEEE
T ss_pred eeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEEEe
Confidence 455678899999999999974321 11236678998888 78999999999986321 1 11233455554
Q ss_pred CCceEEEEEEEEE
Q 040558 353 DNRHSVQMMFAVN 365 (367)
Q Consensus 353 ~~~~~vr~P~~v~ 365 (367)
.++....+|+-..
T Consensus 124 e~G~d~fI~v~g~ 136 (140)
T 3qbt_B 124 DRGKDYFLTISGN 136 (140)
T ss_dssp TTSCEEEEEEEEE
T ss_pred ecCCcEEEEEecc
Confidence 5566667776544
No 51
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=72.65 E-value=46 Score=29.05 Aligned_cols=90 Identities=9% Similarity=0.150 Sum_probs=51.4
Q ss_pred CCCCeEEEeecCCCcceEEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEeeecCCc-e--
Q 040558 268 INYPSISISKLDRHRAAETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYGKEAAGG-Y-- 344 (367)
Q Consensus 268 lN~psi~~~~~~~~~~~~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~~~~~~-~-- 344 (367)
+. ..+-++.+.+ ...+.+.+++|+|+.+...+- +...-|-. .+.+..-.+ ++||+.+++|+++.....+. |
T Consensus 122 ~~-~~~dfG~i~g--~~~~~~f~i~N~G~~pL~I~~-v~~scgct-~~~~~~~~i-~PGe~~~i~v~~~~~~~~g~~~~~ 195 (220)
T 2qsv_A 122 LS-TYLDMGQLDG--ETTKAAIEIRNVGAGPLRLHS-VTTRNPAL-TAVPDRTEI-KPGGSTLLRIAVDPQVMKAEGWQS 195 (220)
T ss_dssp CC-CEEEEEECTT--SCEEEEEEEEECSSSCEEEEE-EEECSTTE-EEEESCSEE-CTTCEEEEEEEECHHHHHHTTCSE
T ss_pred EE-eEEeeeccCC--CeEEEEEEEEECCCCCEEEEE-EEeCCCCE-eeecCCccC-CCCCEEEEEEEEecCCCCCcccce
Confidence 44 5555565553 236777889999998877642 23332322 223333445 68999999999987544222 2
Q ss_pred EEEEEEEE-CC--ceEEEEEEE
Q 040558 345 NFGSVTWS-DN--RHSVQMMFA 363 (367)
Q Consensus 345 ~~G~l~~~-~~--~~~vr~P~~ 363 (367)
....|+.. ++ ...+++.|-
T Consensus 196 ~~~~i~v~~N~~~~p~~~l~i~ 217 (220)
T 2qsv_A 196 IAADISIICNDPQAPLRRIKVK 217 (220)
T ss_dssp EEEEEEEEESCTTCSEEEEEEE
T ss_pred eccEEEEEECCCCCcEEEEEEE
Confidence 44555543 33 334455543
No 52
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=63.79 E-value=1e+02 Score=29.21 Aligned_cols=54 Identities=13% Similarity=0.130 Sum_probs=40.9
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeE----EEEccceeEEecCceEEEEEEEEEeee
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLI----VKVLPQKLVFAEGVKRMSFSVSFYGKE 339 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~----v~v~P~~l~~~~~g~~~~~~vt~~~~~ 339 (367)
.+-+.|++|+|.-+.+|++.-....... ++++|..-++ .+|++.+++|++....
T Consensus 48 ~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 48 QKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp EEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred EEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 5566688999999999999654322222 7788998888 7899999999987743
No 53
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=63.74 E-value=25 Score=28.13 Aligned_cols=50 Identities=20% Similarity=0.214 Sum_probs=41.5
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEe
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
.+-..+++|.++...-|.++-.+|.-. .|.|..=.+ .+|++..+.|++.+
T Consensus 27 ~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 27 HTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEE-CTTCEEEEEEEECC
T ss_pred eEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEE-CCCCEEEEEEEecC
Confidence 456688999999999999999998865 467877666 68999999998877
No 54
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=63.58 E-value=27 Score=28.17 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=33.6
Q ss_pred eEEEEEEEEecCCCc-eeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEE
Q 040558 284 AETVKRTVTNVGLQN-VTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFY 336 (367)
Q Consensus 284 ~~t~~rtvtNvg~~~-~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~ 336 (367)
..+++.+|+|.|... .-|++.+-. .|-.+.-. ...+ ++|+++++++++.
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~ 83 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWT 83 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEEC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEE
Confidence 389999999999854 568887755 34444332 2345 6888888777765
No 55
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=61.89 E-value=28 Score=27.72 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=41.6
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEe
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
++-..+++|.++....|+++-.+|.-. .|.|..=.+ .+|++..++|++.+
T Consensus 29 ~~~~l~L~N~s~~~vaFKVKTT~p~~y--~VrP~~G~i-~P~~s~~v~V~~~~ 78 (128)
T 1z9l_A 29 VTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGVI-DPGSIVTVSVMLQP 78 (128)
T ss_dssp EEEEEEEECCSSSCEEEEEEESCGGGE--EEESCEEEE-CTTCEEEEEEEECC
T ss_pred EEEEEEEECCCCCeEEEEEECCCCCce--EEeCCCcEE-CCCCeEEEEEEECc
Confidence 667789999999999999999988754 567876656 78999999999876
No 56
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=59.91 E-value=27 Score=37.38 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=41.1
Q ss_pred CCCCCCeEEEe--ecCCCcceEEEEEEEEecC-CCce--eEEEEEeCCCC-e-----EEEEccceeEEecCceEEEEEEE
Q 040558 266 SNINYPSISIS--KLDRHRAAETVKRTVTNVG-LQNV--TYISRVNAPSG-L-----IVKVLPQKLVFAEGVKRMSFSVS 334 (367)
Q Consensus 266 ~~lN~psi~~~--~~~~~~~~~t~~rtvtNvg-~~~~--ty~~~v~~p~g-~-----~v~v~P~~l~~~~~g~~~~~~vt 334 (367)
.=|.|-+|... ++.-+....+++.+|||+| +... +-.+-+..|.+ + .+.- -.++.+ ++||+++++++
T Consensus 716 ~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~ 793 (845)
T 3abz_A 716 YGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKG-FEKVHL-EPGEKKTVNID 793 (845)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEE-EEEEEE-CTTCEEEEEEE
T ss_pred CCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheecc-ceeEEE-CCCCEEEEEEE
Confidence 34777777766 5431112378999999999 6443 33443444422 1 1111 123344 79999999999
Q ss_pred EE
Q 040558 335 FY 336 (367)
Q Consensus 335 ~~ 336 (367)
++
T Consensus 794 l~ 795 (845)
T 3abz_A 794 LE 795 (845)
T ss_dssp EE
T ss_pred eC
Confidence 98
No 57
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=59.59 E-value=29 Score=28.83 Aligned_cols=50 Identities=24% Similarity=0.252 Sum_probs=41.7
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEe
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
++-..+++|.++....|+++-.+|.-. .|.|..=.+ .+|++..++|++..
T Consensus 37 ~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI-~P~~s~~V~V~lq~ 86 (152)
T 1wic_A 37 KKTLIVLTNVTKNIVAFKVRTTAPEKY--RVKPSNSSC-DPGASIDIIVSPHG 86 (152)
T ss_dssp CCEEEEEEBCSSSCEEEEEEESCTTTE--EEESSEEEE-CTTCEEEEEEEECS
T ss_pred EEEEEEEEcCCCCeEEEEEECCCCCce--eecCCCcEE-CCCCeEEEEEEecC
Confidence 456788999999999999999998764 567877666 78999999999976
No 58
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=57.93 E-value=45 Score=26.03 Aligned_cols=49 Identities=6% Similarity=0.121 Sum_probs=39.7
Q ss_pred EEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEe
Q 040558 286 TVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 286 t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
+.+.+++|.++....|+++-..|.-. .|.|..=.+ ++|++.++.|+..+
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y--~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEY--RIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSE--EEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCce--EEcCCceEE-CCCCeEEEEEEeCC
Confidence 35678899999999999998888765 456876655 78999999998876
No 59
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=56.52 E-value=43 Score=26.61 Aligned_cols=50 Identities=6% Similarity=0.088 Sum_probs=40.1
Q ss_pred EEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEee
Q 040558 286 TVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYGK 338 (367)
Q Consensus 286 t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~ 338 (367)
+.+.+++|.++....|+++-..|.-. .|.|..=.+ ++|++.++.|+..+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Y--rVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHY--RVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTE--EEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCce--EEcCCceEE-CCCCeEEEEEEeCCC
Confidence 45678999999999999998888765 456776555 789999999998864
No 60
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=54.92 E-value=34 Score=28.07 Aligned_cols=50 Identities=18% Similarity=0.181 Sum_probs=41.6
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEe
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
++-..+++|.++....|+++-.+|.-. .|.|..=.+ .++++..+.|++.+
T Consensus 33 ~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI-~P~~s~~v~V~l~~ 82 (147)
T 2cri_A 33 VTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGII-DPGSIVTVSVMLQP 82 (147)
T ss_dssp CCEEEEEECCSSSCEEEEEEESCTTSE--EEESSEEEC-CTTCEEEEEEEECC
T ss_pred EEEEEEEECCCCCcEEEEEECCCCccE--EEcCCCcEE-CCCCeEEEEEEECC
Confidence 566788999999999999999999765 456876655 78999999999876
No 61
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=53.74 E-value=83 Score=25.08 Aligned_cols=51 Identities=14% Similarity=0.040 Sum_probs=35.1
Q ss_pred EEEEEEEEecCCCcee--------EEEEEeCCCCeEEEE---------ccceeEEecCceEEEEEEEEE
Q 040558 285 ETVKRTVTNVGLQNVT--------YISRVNAPSGLIVKV---------LPQKLVFAEGVKRMSFSVSFY 336 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~t--------y~~~v~~p~g~~v~v---------~P~~l~~~~~g~~~~~~vt~~ 336 (367)
..++.+|+|.++.+.+ |.+.+....|-.|.- .-...++ ++||+.+|+.+++
T Consensus 20 v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~ 87 (120)
T 3isy_A 20 IKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWK 87 (120)
T ss_dssp EEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEES
T ss_pred EEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeC
Confidence 7889999999986543 555665555655431 1223355 7899999999997
No 62
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=49.77 E-value=5 Score=31.96 Aligned_cols=53 Identities=23% Similarity=0.130 Sum_probs=34.0
Q ss_pred EEEEEEEEecCCCceeEEEEEe-CCCCeEEEEccceeEEe-cCceEEEEEEEEEe
Q 040558 285 ETVKRTVTNVGLQNVTYISRVN-APSGLIVKVLPQKLVFA-EGVKRMSFSVSFYG 337 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~-~p~g~~v~v~P~~l~~~-~~g~~~~~~vt~~~ 337 (367)
..+..-++|.+.+..+..+.++ .|.|+++++.|..+++. ..-++++|.|++..
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 3444555666554444555666 68999999999988764 34455666666543
No 63
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=46.31 E-value=1.7e+02 Score=28.96 Aligned_cols=62 Identities=16% Similarity=0.077 Sum_probs=40.3
Q ss_pred CCeEEEeecCCCcceEEEEEEEEecCCCceeE-EEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEee
Q 040558 270 YPSISISKLDRHRAAETVKRTVTNVGLQNVTY-ISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYGK 338 (367)
Q Consensus 270 ~psi~~~~~~~~~~~~t~~rtvtNvg~~~~ty-~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~ 338 (367)
.|.+++.. .++ .+++.+|+|-+.....- ++++..|.+.+++. ....+ ++|++.+++++|+..
T Consensus 364 ~~~~~~~~-g~~---~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~ 426 (601)
T 1w8o_A 364 IPDVALEP-GQQ---VTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVP 426 (601)
T ss_dssp CCCEEECT-TCE---EEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECC
T ss_pred CccceecC-Cce---eEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecC
Confidence 45655542 233 78889999976643322 44467788888876 34445 578888887777764
No 64
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=43.35 E-value=17 Score=25.40 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=25.4
Q ss_pred chHHHHHHHHHHHhhCCCCCHHHHHHHHhhccc
Q 040558 153 ACPHVTGAAAFIRSVHRRWSSSIIKSALMTTAT 185 (367)
Q Consensus 153 AaP~VAG~aALl~~~~p~~s~~~ik~~L~~tA~ 185 (367)
..+..--....|++.+|+++...|+.+|...-.
T Consensus 5 ~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 334445567789999999999999999976544
No 65
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=37.82 E-value=1.5e+02 Score=26.74 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=38.3
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCC--------CeEEEEccceeEEecCceEEEEEEEEEee
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPS--------GLIVKVLPQKLVFAEGVKRMSFSVSFYGK 338 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~--------g~~v~v~P~~l~~~~~g~~~~~~vt~~~~ 338 (367)
...+.+|+|.++.+....+.++..+ ...+.++|..+.+ ++|+++.+.|.....
T Consensus 44 k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 44 REVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp SEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred cEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 4578899999887644455555322 2348899999999 689999998876553
No 66
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=30.11 E-value=1.9e+02 Score=22.31 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=42.6
Q ss_pred eEEEeecCCCcceEEEEEEEEecCCCceeEEEEEeCCCCeEEEEccceeEEecCceEEEEEEEEEeeecCCceEEEEEEE
Q 040558 272 SISISKLDRHRAAETVKRTVTNVGLQNVTYISRVNAPSGLIVKVLPQKLVFAEGVKRMSFSVSFYGKEAAGGYNFGSVTW 351 (367)
Q Consensus 272 si~~~~~~~~~~~~t~~rtvtNvg~~~~ty~~~v~~p~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~~~~~~~~~G~l~~ 351 (367)
.+++.+...- -.++.+|+|-..+...|.-.+..|.-+.+. + ..-++-.|+|.+.. ...|..|..+.
T Consensus 35 vlsV~F~~~~---~~vTItItNe~TG~~VYs~~~s~p~~i~Id-------L-nge~sG~Y~IeI~~---~~~~LtG~F~i 100 (101)
T 3sd2_A 35 ILNVSFGRAK---DYAIITVTNKATGEIVHSKTYHNTSIVMID-------M-SSCEKGEYTIHIIL---NDCLLEGTFTV 100 (101)
T ss_dssp EEEEEESSCC---SCEEEEEEETTTCCEEEEEEESSCSEEEEE-------C-TTSCSEEEEEEEEE---TTEEEEEEEEE
T ss_pred EEEEEeccCC---CcEEEEEEECCCCcEEEEEeccCCcEEEEE-------c-CCCcCceEEEEEEe---CCcEEEEEEEe
Confidence 6677666555 578899999877788999888775433332 2 22335567777753 34566776543
No 67
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=30.06 E-value=38 Score=28.35 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=25.9
Q ss_pred eCccccchHHHHHHHHHHHhhCCCCCHHHHHH
Q 040558 147 KSGTSMACPHVTGAAAFIRSVHRRWSSSIIKS 178 (367)
Q Consensus 147 ~sGTSmAaP~VAG~aALl~~~~p~~s~~~ik~ 178 (367)
+.|-| =|+.|-|.+|||.+.+-..+|++|.+
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 34445 37899999999999999999999865
No 68
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=29.09 E-value=2e+02 Score=22.18 Aligned_cols=14 Identities=29% Similarity=0.275 Sum_probs=11.9
Q ss_pred EEEEEEEEecCCCc
Q 040558 285 ETVKRTVTNVGLQN 298 (367)
Q Consensus 285 ~t~~rtvtNvg~~~ 298 (367)
.+++.+|+|.||.+
T Consensus 20 ~~~~l~V~NtGDRP 33 (101)
T 4ep8_B 20 ATCRVVVENHGDRP 33 (101)
T ss_dssp CEEEEEEEECSSSC
T ss_pred CEEEEEEEeCCCcc
Confidence 57888999999976
No 69
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=28.08 E-value=2.1e+02 Score=24.93 Aligned_cols=55 Identities=20% Similarity=0.105 Sum_probs=38.5
Q ss_pred EEEEEEEEecCCCceeEEEEEeCC-----CCeEEEEccceeEEecCceEEEEEEEEEeeec
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAP-----SGLIVKVLPQKLVFAEGVKRMSFSVSFYGKEA 340 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p-----~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~~~ 340 (367)
..++.+|+|.++.+.--.+.++.- ...-+.++|..+.+ ++|+.+.+.|......+
T Consensus 28 k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~L 87 (218)
T 4ay0_A 28 AGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVF 87 (218)
T ss_dssp SCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCCC
T ss_pred cEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCCC
Confidence 456788999888765555555432 12337789999999 68999999887765443
No 70
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=26.57 E-value=57 Score=24.68 Aligned_cols=38 Identities=11% Similarity=0.139 Sum_probs=28.1
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCeE-EEEccceeEE
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAPSGLI-VKVLPQKLVF 322 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p~g~~-v~v~P~~l~~ 322 (367)
.....-++++..+..+|.+++..|.|+. ++++|+.+++
T Consensus 43 i~A~VDLsg~~~G~~~~~V~v~~P~G~~lv~vsP~~V~~ 81 (90)
T 3lyw_A 43 LFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEISPRVVTL 81 (90)
T ss_dssp CEEEEECTTCCSEEEEEECEECCCTTEEEEEEESSEEEE
T ss_pred EEEEEECcCCCCCcEeEEEEEECCCCCEEEEEccceEEE
Confidence 3444556666666778888999999977 4688888776
No 71
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=25.77 E-value=37 Score=27.90 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=27.9
Q ss_pred eEEeCccccchHHHHHHHHHHHhhCCCCCHHHHHH
Q 040558 144 YAIKSGTSMACPHVTGAAAFIRSVHRRWSSSIIKS 178 (367)
Q Consensus 144 y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~ik~ 178 (367)
-..+.|-|= |+.|-|++|||.+.+-..+|++|.+
T Consensus 69 ~l~f~adSD-A~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 69 IIELQGDSD-AAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp BEEEEEEES-SHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEEecCc-cHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 345556664 7899999999999999999999854
No 72
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=24.83 E-value=2.3e+02 Score=22.73 Aligned_cols=14 Identities=29% Similarity=0.313 Sum_probs=11.9
Q ss_pred EEEEEEEEecCCCc
Q 040558 285 ETVKRTVTNVGLQN 298 (367)
Q Consensus 285 ~t~~rtvtNvg~~~ 298 (367)
.+++.+|+|.||.+
T Consensus 26 ~~~~l~V~NtGDRP 39 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP 39 (126)
T ss_dssp CEEEEEEEECSSSC
T ss_pred cEEEEEEEeCCCCC
Confidence 57889999999975
No 73
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=24.83 E-value=2.3e+02 Score=22.73 Aligned_cols=14 Identities=29% Similarity=0.313 Sum_probs=11.9
Q ss_pred EEEEEEEEecCCCc
Q 040558 285 ETVKRTVTNVGLQN 298 (367)
Q Consensus 285 ~t~~rtvtNvg~~~ 298 (367)
.+++.+|+|.||.+
T Consensus 26 ~~~~l~V~NtGDRP 39 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP 39 (126)
T ss_dssp CEEEEEEEECSSSC
T ss_pred cEEEEEEEeCCCCC
Confidence 57889999999975
No 74
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=24.79 E-value=50 Score=24.92 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=15.6
Q ss_pred EEEccceeEEecCceEEEEEEEEEe
Q 040558 313 VKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 313 v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
+++.|..+++ ..|++..++.++.+
T Consensus 9 i~l~~~~~~l-~vG~t~~L~atv~P 32 (91)
T 2l04_A 9 MTVTPASTSV-VKGQSTTLTVAFQP 32 (91)
T ss_dssp EEEECCCEEE-ETTCEEEEEEEECC
T ss_pred EEEeCCceEE-EcCCEEEEEEEEec
Confidence 4556777776 46777666666654
No 75
>3c8o_A Regulator of ribonuclease activity A; RRAA, PAO1, RNAse E regulater, hydrolase regulator; HET: PGE PG4; 1.90A {Pseudomonas aeruginosa}
Probab=24.40 E-value=65 Score=27.01 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=25.4
Q ss_pred ceeEEEEEeCCCCCccH-HHH--HHHHHcCceEEEEEec
Q 040558 5 AGKIIVCVDDDPTVPRK-IKK--LVAEDADAKGLILIDE 40 (367)
Q Consensus 5 ~GKIvl~~~g~~~~~~~-~~K--~~a~~aGa~gvi~~n~ 40 (367)
.|+|++++.+....|.. .+- ..+++.|.+|+|+.-.
T Consensus 57 ~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG~ 95 (162)
T 3c8o_A 57 KGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGC 95 (162)
T ss_dssp BTEEEEEECTTCSSSBSCCHHHHHHHHHTTBCEEEEEEE
T ss_pred CCCEEEEECCCCCCccchHHHHHHHHHHCCCeEEEecCC
Confidence 68999999753323443 233 6789999999998753
No 76
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=24.29 E-value=3.5e+02 Score=23.43 Aligned_cols=52 Identities=12% Similarity=-0.014 Sum_probs=37.6
Q ss_pred EEEEEEEEecCCC-ceeEEEEEeCCC-----CeEEEEccceeEEecCceEEEEEEEEEe
Q 040558 285 ETVKRTVTNVGLQ-NVTYISRVNAPS-----GLIVKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 285 ~t~~rtvtNvg~~-~~ty~~~v~~p~-----g~~v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
...+.+|+|.++. +.--.+.++..+ ...+.++|..+.+ ++++++.+.|....
T Consensus 16 k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 16 KSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTP 73 (218)
T ss_dssp SEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEE-CTTCEEEEEEEECG
T ss_pred CEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEE-CCCCceEEEEEecC
Confidence 5677889999876 645555555432 2237899999999 68899999887765
No 77
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=23.79 E-value=3e+02 Score=24.35 Aligned_cols=53 Identities=19% Similarity=0.071 Sum_probs=36.6
Q ss_pred EEEEEEEEecCCCceeEEEEEeCC---CCeEEEEccceeEEecCceEEEEEEEEEee
Q 040558 285 ETVKRTVTNVGLQNVTYISRVNAP---SGLIVKVLPQKLVFAEGVKRMSFSVSFYGK 338 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~ty~~~v~~p---~g~~v~v~P~~l~~~~~g~~~~~~vt~~~~ 338 (367)
...+.+|+|.++.+.--.+.++.. ...-+.++|..+.+ ++++.+.+.|.....
T Consensus 38 k~~sl~l~N~~~~P~LvQsWv~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~ 93 (239)
T 4djm_A 38 SGETLTVINDQDYPMLVQSEVLSEDQKSPAPFVVTPPLFRL-DGQQSSRLRIVRTGG 93 (239)
T ss_dssp SCEEEEEEECSSSCEEEEEEEECTTSSSBCSEEEESSEEEE-CTTEEEEEEEEECSC
T ss_pred CEEEEEEEeCCCCcEEEEEEEEcCCCCccCCEEEcCCeEEE-CCCCceEEEEEECCC
Confidence 456788999887654334444432 12348899999999 689999988876543
No 78
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=23.40 E-value=2.7e+02 Score=21.74 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=16.0
Q ss_pred EEEEEEEEecCCCc-eeEEEEEe
Q 040558 285 ETVKRTVTNVGLQN-VTYISRVN 306 (367)
Q Consensus 285 ~t~~rtvtNvg~~~-~ty~~~v~ 306 (367)
.+++.+|+|.|... ..+++.+.
T Consensus 21 ~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 21 NTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp EEEEEEEEECSSSCBCCEEEEEE
T ss_pred EEEEEEEEECCCCCCCCEEEEEE
Confidence 88999999999743 34555553
No 79
>1q5x_A Regulator of RNAse E activity A; 3-layer sandwich, alpha-beta structure, parallel beta sheet, antiparallel beta sheet, hydrolase inhibitor; 2.00A {Escherichia coli} SCOP: c.8.7.1
Probab=22.97 E-value=65 Score=26.93 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=25.6
Q ss_pred ceeEEEEEeCCCCCccH-HHH--HHHHHcCceEEEEEec
Q 040558 5 AGKIIVCVDDDPTVPRK-IKK--LVAEDADAKGLILIDE 40 (367)
Q Consensus 5 ~GKIvl~~~g~~~~~~~-~~K--~~a~~aGa~gvi~~n~ 40 (367)
.|+|++++.+....|.. .+- ..+++.|.+|+|+.--
T Consensus 57 ~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~G~VidG~ 95 (161)
T 1q5x_A 57 RGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGA 95 (161)
T ss_dssp TTEEEEEECTTCSSSEEECHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEECCCCCCceeehHHHHHHHHHCCCeEEEecCc
Confidence 68999999653333443 333 6789999999998753
No 80
>1vi4_A Regulator of ribonuclease acivity A protein 1; structural genomics, unknown function; 1.87A {Vibrio cholerae} SCOP: c.8.7.1
Probab=22.69 E-value=67 Score=27.32 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=26.2
Q ss_pred CceeEEEEEeCCCCCccH-HHH--HHHHHcCceEEEEEecC
Q 040558 4 VAGKIIVCVDDDPTVPRK-IKK--LVAEDADAKGLILIDED 41 (367)
Q Consensus 4 V~GKIvl~~~g~~~~~~~-~~K--~~a~~aGa~gvi~~n~~ 41 (367)
-.|+|++++.+....|.. .+- ..+++.|.+|+|+.-..
T Consensus 59 ~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG~v 99 (174)
T 1vi4_A 59 GKGKVLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAV 99 (174)
T ss_dssp CTTEEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCCEEEEEECCCCCCceehHHHHHHHHHHCCCeEEEecccc
Confidence 368999999653323443 333 67899999999987543
No 81
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=22.48 E-value=1.5e+02 Score=22.97 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=23.6
Q ss_pred EEEEEEEEecCCCc-eeEEEEEeCCCCeEEE
Q 040558 285 ETVKRTVTNVGLQN-VTYISRVNAPSGLIVK 314 (367)
Q Consensus 285 ~t~~rtvtNvg~~~-~ty~~~v~~p~g~~v~ 314 (367)
.+.+.+|+|.|+.+ .-|++++.-|.|.+|+
T Consensus 17 f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 17 ASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp EEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred EEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 67789999999755 4599999988776654
No 82
>1j3l_A Demethylmenaquinone methyltransferase; vitamine K2, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Thermus thermophilus} SCOP: c.8.7.1
Probab=22.43 E-value=77 Score=26.63 Aligned_cols=35 Identities=11% Similarity=0.070 Sum_probs=24.8
Q ss_pred ceeEEEEEeCCCCCccH-HHH--HHHHHcCceEEEEEe
Q 040558 5 AGKIIVCVDDDPTVPRK-IKK--LVAEDADAKGLILID 39 (367)
Q Consensus 5 ~GKIvl~~~g~~~~~~~-~~K--~~a~~aGa~gvi~~n 39 (367)
.|+|++++.+....|.. .+- ..+++.|.+|+|+.-
T Consensus 56 ~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG 93 (164)
T 1j3l_A 56 AGQVLFVDGGGSLRTALLGGNLARRAWEKGWAGVVVHG 93 (164)
T ss_dssp BTEEEEEECTTCCSSBSCCHHHHHHHHHTTBCEEEEES
T ss_pred CCcEEEEECCCCCCceeehHHHHHHHHHCCCeEEEecC
Confidence 68999999653323443 233 678999999999864
No 83
>1nxj_A Probable S-adenosylmethionine:2- demethylmenaquinone methyltransferase; beta/BETA/alpha domain, structural genomics, PSI; HET: TLA; 1.90A {Mycobacterium tuberculosis} SCOP: c.8.7.1
Probab=21.74 E-value=61 Score=27.84 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=25.8
Q ss_pred CceeEEEEEeCCCCCccH-HHH--HHHHHcCceEEEEEec
Q 040558 4 VAGKIIVCVDDDPTVPRK-IKK--LVAEDADAKGLILIDE 40 (367)
Q Consensus 4 V~GKIvl~~~g~~~~~~~-~~K--~~a~~aGa~gvi~~n~ 40 (367)
-.|+|++++.+....|+. .+- ..+++.|.+|+|+.-.
T Consensus 85 ~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG~ 124 (183)
T 1nxj_A 85 SAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHGA 124 (183)
T ss_dssp CSSCEEEEECTTCCSSEEECHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCCEEEEECCCCCCceeeHHHHHHHHHHCCCcEEEeccc
Confidence 368999999653323443 233 6788999999998753
No 84
>2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain; 1.90A {Geobacillus kaustophilus}
Probab=21.09 E-value=72 Score=26.68 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=25.4
Q ss_pred ceeEEEEEeCCCCCccH-HHH--HHHHHcCceEEEEEec
Q 040558 5 AGKIIVCVDDDPTVPRK-IKK--LVAEDADAKGLILIDE 40 (367)
Q Consensus 5 ~GKIvl~~~g~~~~~~~-~~K--~~a~~aGa~gvi~~n~ 40 (367)
.|+|++++.+....|.. .+- ..+++.|.+|+|+.--
T Consensus 55 ~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG~ 93 (161)
T 2pcn_A 55 PGTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHGC 93 (161)
T ss_dssp TTCEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEECCCCCCceeehHHHHHHHHHcCCcEEEeccc
Confidence 68999999653323443 233 6789999999998753
No 85
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=21.02 E-value=80 Score=21.03 Aligned_cols=25 Identities=12% Similarity=0.163 Sum_probs=21.0
Q ss_pred HHHHHHhhCCCCCHHHHHHHHhhcc
Q 040558 160 AAAFIRSVHRRWSSSIIKSALMTTA 184 (367)
Q Consensus 160 ~aALl~~~~p~~s~~~ik~~L~~tA 184 (367)
-..+|.+.+|+.+..+||..|...-
T Consensus 7 ~v~~L~EMFP~~~~~~ik~~L~~~~ 31 (49)
T 1otr_A 7 KLSILMDMFPAISKSKLQVHLLENN 31 (49)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 3568889999999999999996653
No 86
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=21.00 E-value=2.9e+02 Score=26.35 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=31.0
Q ss_pred EEEEEEEEecCCCcee---EE-EE--EeC----------CC------CeEEEEccceeEEecCceEEEEEEEEEe
Q 040558 285 ETVKRTVTNVGLQNVT---YI-SR--VNA----------PS------GLIVKVLPQKLVFAEGVKRMSFSVSFYG 337 (367)
Q Consensus 285 ~t~~rtvtNvg~~~~t---y~-~~--v~~----------p~------g~~v~v~P~~l~~~~~g~~~~~~vt~~~ 337 (367)
.+++.+|||.|+.+.. |+ +. ... |+ | ++|+|+.-- .+||+++++|+.+-
T Consensus 266 l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~g--L~vsd~~pI--~PGETr~~~v~a~d 336 (382)
T 1yew_A 266 MRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDG--LSVSDNSPL--APGETRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTC--EEESCCSCB--CTTCEEEEEEEEEC
T ss_pred EEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCC--ceeCCCCCc--CCCceeEEEEEeeh
Confidence 6788899999997642 11 11 111 21 3 345555432 68999999998875
Done!