Query 040559
Match_columns 333
No_of_seqs 215 out of 1165
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 15:22:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040559.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040559hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.4E-73 8.4E-78 531.5 27.1 283 34-319 4-309 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 4E-72 1.4E-76 531.6 28.0 284 35-318 45-344 (356)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 2.2E-73 7.5E-78 532.5 15.6 277 35-317 2-291 (319)
4 1odm_A Isopenicillin N synthas 100.0 7.4E-69 2.5E-73 504.9 27.7 277 33-319 5-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 2E-68 7E-73 497.7 19.3 271 35-317 3-303 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.9E-66 6.5E-71 477.5 24.1 259 35-319 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.2 0.043 1.5E-06 48.3 7.1 78 189-284 100-194 (243)
8 2rg4_A Uncharacterized protein 93.3 1.5 5.2E-05 37.5 12.9 43 233-287 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 91.2 0.71 2.4E-05 40.5 8.2 79 190-284 119-212 (247)
10 3itq_A Prolyl 4-hydroxylase, a 90.3 1.2 4E-05 38.3 8.6 102 163-284 94-211 (216)
11 2jig_A Prolyl-4 hydroxylase; h 89.3 1.2 4E-05 38.3 7.9 88 189-286 99-218 (224)
12 2iuw_A Alkylated repair protei 83.6 8 0.00027 33.5 10.2 83 189-283 127-228 (238)
13 3s57_A Alpha-ketoglutarate-dep 81.9 3.2 0.00011 35.2 6.7 81 190-282 102-200 (204)
14 3tht_A Alkylated DNA repair pr 80.2 3.8 0.00013 37.7 7.1 92 189-287 199-315 (345)
15 3i3q_A Alpha-ketoglutarate-dep 79.7 13 0.00045 31.5 9.9 79 189-283 106-201 (211)
16 2dbn_A Hypothetical protein YB 52.1 5 0.00017 38.2 1.5 56 32-91 96-151 (461)
17 2opi_A L-fuculose-1-phosphate 49.3 8.6 0.0003 32.5 2.5 36 36-74 125-160 (212)
18 4ay7_A Methylcobalamin\: coenz 49.0 42 0.0014 30.4 7.3 46 46-91 299-348 (348)
19 1e4c_P L-fuculose 1-phosphate 43.6 12 0.0004 31.7 2.4 37 35-74 121-157 (215)
20 3o2g_A Gamma-butyrobetaine dio 42.6 8.6 0.00029 35.8 1.5 52 36-92 122-173 (388)
21 1pvt_A Sugar-phosphate aldolas 38.3 17 0.0006 31.1 2.7 37 35-74 160-196 (238)
22 2fk5_A Fuculose-1-phosphate al 38.3 16 0.00054 30.6 2.4 51 35-88 116-175 (200)
23 2irp_A Putative aldolase class 37.3 17 0.00057 30.5 2.4 36 35-74 138-176 (208)
24 1otj_A Alpha-ketoglutarate-dep 36.5 30 0.001 30.2 4.1 45 34-81 15-59 (283)
25 1m5a_B Insulin B chain; alpha 35.9 37 0.0012 19.3 2.8 19 50-68 8-26 (30)
26 1oih_A Putative alkylsulfatase 34.9 34 0.0012 30.2 4.2 50 35-90 26-76 (301)
27 2v9l_A Rhamnulose-1-phosphate 32.6 18 0.00061 31.9 1.9 36 36-74 179-214 (274)
28 3ocr_A Class II aldolase/adduc 27.3 29 0.00099 30.6 2.3 38 35-74 155-192 (273)
29 3kt7_A PKHD-type hydroxylase T 26.6 1.6E+02 0.0054 29.1 7.5 104 162-287 104-231 (633)
30 2x4k_A 4-oxalocrotonate tautom 25.8 67 0.0023 20.3 3.5 24 156-179 18-41 (63)
31 3pvj_A Alpha-ketoglutarate-dep 25.6 49 0.0017 29.0 3.5 50 34-89 13-62 (277)
32 2da7_A Zinc finger homeobox pr 24.9 19 0.00064 25.0 0.4 40 144-183 14-53 (71)
33 2ld7_A Histone deacetylase com 22.1 1.7E+02 0.0058 21.3 5.2 57 33-100 15-71 (94)
34 3abf_A 4-oxalocrotonate tautom 22.0 94 0.0032 19.8 3.6 24 157-180 17-40 (64)
35 2do1_A Nuclear protein HCC-1; 21.2 84 0.0029 20.4 3.1 38 39-86 7-44 (55)
36 2ww6_A Fibritin, T4 fibritin; 20.8 52 0.0018 18.0 1.6 14 226-239 11-24 (27)
37 3r1j_A Alpha-ketoglutarate-dep 20.3 88 0.003 27.7 4.1 50 35-90 20-70 (301)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.4e-73 Score=531.51 Aligned_cols=283 Identities=22% Similarity=0.402 Sum_probs=244.1
Q ss_pred CCCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhhhccccCCCCcccc-
Q 040559 34 ECQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFHQPFRKKSEQNFMNLSADSYRW- 112 (333)
Q Consensus 34 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~~- 112 (333)
..+||||||+.+.+ ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .....||
T Consensus 4 ~~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~~~Gy~ 80 (312)
T 3oox_A 4 TSAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV--KGGARGYI 80 (312)
T ss_dssp CCSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS--GGGTSEEE
T ss_pred CCCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC--CCCccccc
Confidence 46899999998754 6788899999999999999999999999999999999999999999999997321 1122233
Q ss_pred --CCCCcccccccccccccCCCCCCC--------CCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHHHHcCCCchhh
Q 040559 113 --GNPKATCLKQFLWSEALHIPVTDI--------SRLGDES---NNPRSTIGLFSTKAANLAERLAEYLARNLKIKSSYF 179 (333)
Q Consensus 113 --g~~~~~~~~~~d~~E~~~~~~~~~--------~~~~~~P---~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 179 (333)
|.+........||+|.|+++.... ..++.|| ++||+++++|+++|.+|+.+||++|+++||+++++|
T Consensus 81 ~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 160 (312)
T 3oox_A 81 PFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFF 160 (312)
T ss_dssp CCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTT
T ss_pred cccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 333222334589999998754211 1234555 789999999999999999999999999999999999
Q ss_pred hhccCCCceeeEEeecCCCCCCCCcccccccccCCeeEEEEeCCCCceeec-cCCceEEecCCCCceEEechhhHHHhhC
Q 040559 180 RENCLPGSSYLRMNRYPPCPPSFEVLGLIPHTDSDFLTILYQDHVGGLQLK-KDGRWLSVKPNPDVLIVNVGDLFQALSN 258 (333)
Q Consensus 180 ~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~lvVniGd~l~~~Tn 258 (333)
.+.+..+.+.+|++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+|||
T Consensus 161 ~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 240 (312)
T 3oox_A 161 KPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTN 240 (312)
T ss_dssp HHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTT
T ss_pred HHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhC
Confidence 999988888999999999987655599999999999999999999999997 8899999999999999999999999999
Q ss_pred CcccCccceeecCC----CCceEEEEEeecCCCCceEecCCC---CCCCCccc-ccCHHHHHHHHHHHH
Q 040559 259 GVYKSVEHRVVSHP----KVERYSVAYFYCPSYEAVIESTEN---IIEPAIYR-KFSFREYKQQIQEDV 319 (333)
Q Consensus 259 G~~~s~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~---~~~~~~y~-~~t~~ey~~~~~~~~ 319 (333)
|+||||.|||+.++ +.+|||++||++|+.|++|+|+++ .++|++|+ ++|++||++.+++++
T Consensus 241 G~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 241 NVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp TSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred CeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 99999999999874 467999999999999999999875 46899999 999999999988754
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4e-72 Score=531.65 Aligned_cols=284 Identities=25% Similarity=0.401 Sum_probs=246.5
Q ss_pred CCCceEeCCCCCCC---CHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhhhccccCCCCccc
Q 040559 35 CQLPSIDLARLNFR---SFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFHQPFRKKSEQNFMNLSADSYR 111 (333)
Q Consensus 35 ~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~ 111 (333)
.+||||||+.+.++ ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......+..|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 47999999998754 356789999999999999999999999999999999999999999999999732111012345
Q ss_pred cCCCCcc-cccccccccccCCCCCCC--CCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhccC-
Q 040559 112 WGNPKAT-CLKQFLWSEALHIPVTDI--SRLGDE---SNNPRSTIGLFSTKAANLAERLAEYLARNLKIKSSYFRENCL- 184 (333)
Q Consensus 112 ~g~~~~~-~~~~~d~~E~~~~~~~~~--~~~~~~---P~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~- 184 (333)
|+..... .....||+|.|++...+. ..++.| |++||+++++|+++|.+|+..||++|+++||+++++|.+.+.
T Consensus 125 y~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 204 (356)
T 1gp6_A 125 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGG 204 (356)
T ss_dssp EECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTH
T ss_pred cCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcc
Confidence 5544322 234579999998754321 122233 479999999999999999999999999999999999999887
Q ss_pred --CCceeeEEeecCCCCCCCCcccccccccCCeeEEEEeCCCCceeeccCCceEEecCCCCceEEechhhHHHhhCCccc
Q 040559 185 --PGSSYLRMNRYPPCPPSFEVLGLIPHTDSDFLTILYQDHVGGLQLKKDGRWLSVKPNPDVLIVNVGDLFQALSNGVYK 262 (333)
Q Consensus 185 --~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~pg~lvVniGd~l~~~TnG~~~ 262 (333)
.+.+.+|++|||||+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|+||++||||||+||+||||+||
T Consensus 205 ~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~k 284 (356)
T 1gp6_A 205 LEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYK 284 (356)
T ss_dssp HHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSC
T ss_pred cCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEee
Confidence 477889999999999887889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeecCCCCceEEEEEeecCCCCc-eEecCCC---CCCCCcccccCHHHHHHHHHHH
Q 040559 263 SVEHRVVSHPKVERYSVAYFYCPSYEA-VIESTEN---IIEPAIYRKFSFREYKQQIQED 318 (333)
Q Consensus 263 s~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p~~~---~~~~~~y~~~t~~ey~~~~~~~ 318 (333)
||+|||+.+++.+|||++||++|+.|+ +|+|+++ .++|++|+++|++||++.++..
T Consensus 285 S~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~ 344 (356)
T 1gp6_A 285 SILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFG 344 (356)
T ss_dssp CCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred ccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHh
Confidence 999999998888999999999999999 9999875 4689999999999999887654
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.2e-73 Score=532.53 Aligned_cols=277 Identities=29% Similarity=0.545 Sum_probs=238.9
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhhhccccCCCCccccCC
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFHQPFRKKSEQNFMNLSADSYRWGN 114 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~~g~ 114 (333)
.+||||||+.+...++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++. .. .. +|+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~--~~-~~--Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKEL--VA-SK--ALEG 76 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-HH--HHTT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhc--cC-CC--CCCc
Confidence 4699999999864468889999999999999999999999999999999999999999999999962 11 11 3322
Q ss_pred CCcccccccccccccCCCCCCCCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhccCC---Cce
Q 040559 115 PKATCLKQFLWSEALHIPVTDISRLGDE---SNNPRSTIGLFSTKAANLAERLAEYLARNLKIKSSYFRENCLP---GSS 188 (333)
Q Consensus 115 ~~~~~~~~~d~~E~~~~~~~~~~~~~~~---P~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~---~~~ 188 (333)
.. ......||+|.|.+...+...++.| |++||+++++|+++|.+|+..||++|+++||+++++|.+.+.. +.+
T Consensus 77 ~~-~e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~ 155 (319)
T 1w9y_A 77 VQ-AEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNF 155 (319)
T ss_dssp CC-CCGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEE
T ss_pred cc-ccCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccc
Confidence 21 1235679999998754322223334 3689999999999999999999999999999999999988763 557
Q ss_pred eeEEeecCCCCCCCCcccccccccCCeeEEEEeC-CCCceeeccCCceEEecCCCCceEEechhhHHHhhCCcccCccce
Q 040559 189 YLRMNRYPPCPPSFEVLGLIPHTDSDFLTILYQD-HVGGLQLKKDGRWLSVKPNPDVLIVNVGDLFQALSNGVYKSVEHR 267 (333)
Q Consensus 189 ~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~pg~lvVniGd~l~~~TnG~~~s~~HR 267 (333)
.+|++|||||+.++...|+++|||+|+||||+|| +++||||+++|+|++|+|.||++||||||+||+||||+|||+.||
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HR 235 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHR 235 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEE
T ss_pred eeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccce
Confidence 8999999999988788999999999999999995 799999999999999999999999999999999999999999999
Q ss_pred eecCCCCceEEEEEeecCCCCceEecCCC---CC---CCCcccccCHHHHHHHHHH
Q 040559 268 VVSHPKVERYSVAYFYCPSYEAVIESTEN---II---EPAIYRKFSFREYKQQIQE 317 (333)
Q Consensus 268 V~~~~~~~R~Si~~F~~P~~d~~i~p~~~---~~---~~~~y~~~t~~ey~~~~~~ 317 (333)
|+.+++++|+|++||++|+.|++|.|+++ .+ +|++|+++|++||++.++.
T Consensus 236 Vv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~ 291 (319)
T 1w9y_A 236 VIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAG 291 (319)
T ss_dssp ECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTT
T ss_pred ecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHh
Confidence 99998889999999999999999999875 23 4999999999999987654
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=7.4e-69 Score=504.95 Aligned_cols=277 Identities=19% Similarity=0.254 Sum_probs=238.0
Q ss_pred CCCCCceEeCCCCCCC---CHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHh-cCCChhhhhhhccccCCCC
Q 040559 33 EECQLPSIDLARLNFR---SFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKI-FHQPFRKKSEQNFMNLSAD 108 (333)
Q Consensus 33 ~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~ 108 (333)
+..+||||||+.+.++ ++.+++++|.+||++||||||+|||| +++++++++++| |+||.|+|+++.. .+
T Consensus 5 ~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~----~G 77 (331)
T 1odm_A 5 SKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI----RA 77 (331)
T ss_dssp CBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC----TT
T ss_pred cCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh----cC
Confidence 4568999999998654 45678999999999999999999999 999999999999 9999999999721 12
Q ss_pred ccccCCCCccc------ccccccccccCCCCCC------------CCCCCCC-----CCChhhHHHHHHHHHHHHHHHHH
Q 040559 109 SYRWGNPKATC------LKQFLWSEALHIPVTD------------ISRLGDE-----SNNPRSTIGLFSTKAANLAERLA 165 (333)
Q Consensus 109 ~~~~g~~~~~~------~~~~d~~E~~~~~~~~------------~~~~~~~-----P~~fr~~~~~y~~~~~~l~~~ll 165 (333)
+.++|.+.... ....||+|.|+++... ...++.| +++||+++++|+++|.+|+..||
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll 157 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL 157 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 22233332111 1467999999987431 1123344 46899999999999999999999
Q ss_pred HHHHHHcCCCchhhhhccCCCceeeE--EeecC------C---CCCCCC-cccccccccCCeeEEEEeCCCCceeec-cC
Q 040559 166 EYLARNLKIKSSYFRENCLPGSSYLR--MNRYP------P---CPPSFE-VLGLIPHTDSDFLTILYQDHVGGLQLK-KD 232 (333)
Q Consensus 166 ~~la~~Lgl~~~~f~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~ 232 (333)
++|+++||+++++|.+.+..+.+.+| ++||| | |+.++. .+|+++|||+|+||||+||+++||||+ ++
T Consensus 158 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~ 237 (331)
T 1odm_A 158 KGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAA 237 (331)
T ss_dssp HHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETT
T ss_pred HHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCC
Confidence 99999999999999999988888999 99999 7 766665 899999999999999999999999999 88
Q ss_pred CceEEecCCCCceEEechhhHHHhhCCcccCccceeecCCCCceEEEEEeecCCCCceEecCCC---CCCCCcccccCHH
Q 040559 233 GRWLSVKPNPDVLIVNVGDLFQALSNGVYKSVEHRVVSHPKVERYSVAYFYCPSYEAVIESTEN---IIEPAIYRKFSFR 309 (333)
Q Consensus 233 g~W~~V~p~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~---~~~~~~y~~~t~~ 309 (333)
| |++|+|+||++||||||+||+||||+||||.|||+.+ +.+|+|++||++|+.|++|+|+++ .++ ++|+++|++
T Consensus 238 g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~ 314 (331)
T 1odm_A 238 G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYG 314 (331)
T ss_dssp E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHH
T ss_pred C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHH
Confidence 8 9999999999999999999999999999999999965 679999999999999999999875 234 899999999
Q ss_pred HHHHHHHHHH
Q 040559 310 EYKQQIQEDV 319 (333)
Q Consensus 310 ey~~~~~~~~ 319 (333)
||++.+++.+
T Consensus 315 e~l~~~~~~~ 324 (331)
T 1odm_A 315 DYLQNGLVSL 324 (331)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2e-68 Score=497.69 Aligned_cols=271 Identities=17% Similarity=0.222 Sum_probs=223.0
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcCCC-hhhhhhhccccCCCCccccC
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFHQP-FRKKSEQNFMNLSADSYRWG 113 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lP-~e~K~~~~~~~~~~~~~~~g 113 (333)
.+||||||+.+.+++.. ++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++... ......||+
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~-~~~~~~Gy~ 78 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSP-VPTMRRGFT 78 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCS-SCCSSSEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhcc-CCCCCCcee
Confidence 57999999987543322 389999999999999999999999999999999999999 9999997321 112223443
Q ss_pred CCCc-------ccccccccccccCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHcCC----Cchhhhhc
Q 040559 114 NPKA-------TCLKQFLWSEALHIPVTDISRLGDESNNPRSTIGLFSTKAANLAERLAEYLARNLKI----KSSYFREN 182 (333)
Q Consensus 114 ~~~~-------~~~~~~d~~E~~~~~~~~~~~~~~~P~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl----~~~~f~~~ 182 (333)
.... ......||+|.|+++..+..|| |++||+.+++|+++|.+|+..||++|+++||+ ++++|.+.
T Consensus 79 ~~~~e~~~~~~~~~~~~d~~E~~~~~~~~n~wP---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~ 155 (311)
T 1dcs_A 79 GLESESTAQITNTGSYSDYSMCYSMGTADNLFP---SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC 155 (311)
T ss_dssp EC-----------------CEEEEECSSSCCCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC
T ss_pred eccccccccccCCCCCCCcceeeeccCCCCCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc
Confidence 3221 1134689999999976644454 58999999999999999999999999999999 88888765
Q ss_pred cCCCceeeEEeecCCCCCCC--C--cccccccccCCeeEEEEeC-CCCc---eeeccCCceEEecCCCCceEEechhhHH
Q 040559 183 CLPGSSYLRMNRYPPCPPSF--E--VLGLIPHTDSDFLTILYQD-HVGG---LQLKKDGRWLSVKPNPDVLIVNVGDLFQ 254 (333)
Q Consensus 183 ~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~qd-~~~G---LqV~~~g~W~~V~p~pg~lvVniGd~l~ 254 (333)
.+.+|++|||||+.++ + .+|+++|||+|+||||+|| +++| |||+.+|+|++|+|+||++||||||+||
T Consensus 156 ----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~ 231 (311)
T 1dcs_A 156 ----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIAT 231 (311)
T ss_dssp ----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred ----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHH
Confidence 6789999999998653 3 6789999999999999999 8999 9999999999999999999999999999
Q ss_pred HhhCCcccCccceeecCC-----CCceEEEEEeecCCCCceEecCCC---CCCCCcc--cccCHHHHHHHHHH
Q 040559 255 ALSNGVYKSVEHRVVSHP-----KVERYSVAYFYCPSYEAVIESTEN---IIEPAIY--RKFSFREYKQQIQE 317 (333)
Q Consensus 255 ~~TnG~~~s~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~p~~~---~~~~~~y--~~~t~~ey~~~~~~ 317 (333)
+||||+||||.|||+.++ +.+|||++||++|+.|++|. +++ .++|++| +++|++||++.+++
T Consensus 232 ~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~ 303 (311)
T 1dcs_A 232 LVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYV 303 (311)
T ss_dssp HHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCC
T ss_pred HHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHH
Confidence 999999999999999987 67999999999999999999 754 4689999 99999999877654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.9e-66 Score=477.47 Aligned_cols=259 Identities=25% Similarity=0.370 Sum_probs=217.4
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhhhccccCCCCccccCC
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFHQPFRKKSEQNFMNLSADSYRWGN 114 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~~g~ 114 (333)
++||||||+... .+++|.+||++||||||+|||||.++++++++++++||+| |+|+++... .....||+.
T Consensus 2 ~~IPvIDls~~~------~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~--~~~~~GY~~ 71 (280)
T 3on7_A 2 MKLETIDYRAAD------SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFN--RETHDGFFP 71 (280)
T ss_dssp --CCEEETTSTT------HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCC--TTTCCEEEC
T ss_pred CCCCEEECCChh------HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccC--CCCCCcccc
Confidence 479999999742 4789999999999999999999999999999999999998 788886322 222334433
Q ss_pred CC----cccccccccccccCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHcCCCc--hh---hhhccCC
Q 040559 115 PK----ATCLKQFLWSEALHIPVTDISRLGDESNNPRSTIGLFSTKAANLAERLAEYLARNLKIKS--SY---FRENCLP 185 (333)
Q Consensus 115 ~~----~~~~~~~d~~E~~~~~~~~~~~~~~~P~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~--~~---f~~~~~~ 185 (333)
.. .......||+|.|++. .++.+|++||+++++|+++|.+|+.+||++||++||++. ++ |.+.+..
T Consensus 72 ~~~~e~~~~~~~~D~kE~~~~~-----p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~ 146 (280)
T 3on7_A 72 ASISETAKGHTVKDIKEYYHVY-----PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIAN 146 (280)
T ss_dssp CC--------CCCCSCEEEEEC-----TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTT
T ss_pred CccccccCCCCcccHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcC
Confidence 22 1122357999998874 124567899999999999999999999999999999763 33 4455555
Q ss_pred Cc-eeeEEeecCCCCCCC--CcccccccccCCeeEEEEeCCCCceeec-cCCceEEecCCCCceEEechhhHHHhhCCcc
Q 040559 186 GS-SYLRMNRYPPCPPSF--EVLGLIPHTDSDFLTILYQDHVGGLQLK-KDGRWLSVKPNPDVLIVNVGDLFQALSNGVY 261 (333)
Q Consensus 186 ~~-~~lr~~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~lvVniGd~l~~~TnG~~ 261 (333)
+. +.+|++|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+||||+|
T Consensus 147 ~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~ 226 (280)
T 3on7_A 147 SHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYF 226 (280)
T ss_dssp CSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSS
T ss_pred CccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcc
Confidence 54 789999999998654 5789999999999999999999999998 7999999999999999999999999999999
Q ss_pred cCccceeecCC----CCceEEEEEeecCCCCceEecCCCCCCCCcccccCHHHHHHHHHHHH
Q 040559 262 KSVEHRVVSHP----KVERYSVAYFYCPSYEAVIESTENIIEPAIYRKFSFREYKQQIQEDV 319 (333)
Q Consensus 262 ~s~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~y~~~t~~ey~~~~~~~~ 319 (333)
|||.|||+.++ ..+|||++||++|+.|++|.| ++|++||++++++++
T Consensus 227 kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p-----------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 227 PSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE-----------RYTADSYLMERLREL 277 (280)
T ss_dssp CCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS-----------SCBHHHHHHHHHHHT
T ss_pred cCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC-----------CccHHHHHHHHHHHh
Confidence 99999999874 458999999999999999975 499999999998764
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.16 E-value=0.043 Score=48.34 Aligned_cols=78 Identities=22% Similarity=0.177 Sum_probs=52.7
Q ss_pred eeEEeecCCCCCCCCcccccccccCC-----------eeEEEEe--C--C-CCc-eeeccCCceEEecCCCCceEEechh
Q 040559 189 YLRMNRYPPCPPSFEVLGLIPHTDSD-----------FLTILYQ--D--H-VGG-LQLKKDGRWLSVKPNPDVLIVNVGD 251 (333)
Q Consensus 189 ~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d--~-~~G-LqV~~~g~W~~V~p~pg~lvVniGd 251 (333)
.+++++|.+-. -..+|.|.. .+|+++. | . .|| |.+.....=..|+|..|++|+.-.
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 48899997632 246676653 4666654 3 1 234 555543334679999999998642
Q ss_pred hHHHhhCCcccCccceeecCCCCceEEEEEeec
Q 040559 252 LFQALSNGVYKSVEHRVVSHPKVERYSVAYFYC 284 (333)
Q Consensus 252 ~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 284 (333)
.++|+|.......|+++..+++
T Consensus 173 -----------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 -----------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp -----------TSEEEECCEEEECEEEEEEEEE
T ss_pred -----------CCeEcCccccccCEEEEEEehh
Confidence 3689997765579999998875
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.33 E-value=1.5 Score=37.51 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=33.0
Q ss_pred CceEEecCCCCceEEechhhHHHhhCCcccCccceeecCC-CCceEEEEEeecCCC
Q 040559 233 GRWLSVKPNPDVLIVNVGDLFQALSNGVYKSVEHRVVSHP-KVERYSVAYFYCPSY 287 (333)
Q Consensus 233 g~W~~V~p~pg~lvVniGd~l~~~TnG~~~s~~HRV~~~~-~~~R~Si~~F~~P~~ 287 (333)
..+..|.|.+|.+||.-+. ..|+|.... +.+|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4567899999999987654 269998765 368999999887764
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.16 E-value=0.71 Score=40.53 Aligned_cols=79 Identities=25% Similarity=0.475 Sum_probs=54.6
Q ss_pred eEEeecCCCCCCCCcccccccccCC-----eeEEEEe--CC-----CCc-eeeccCC--ceEEecCCCCceEEechhhHH
Q 040559 190 LRMNRYPPCPPSFEVLGLIPHTDSD-----FLTILYQ--DH-----VGG-LQLKKDG--RWLSVKPNPDVLIVNVGDLFQ 254 (333)
Q Consensus 190 lr~~~Yp~~~~~~~~~g~~~HtD~g-----~lTlL~q--d~-----~~G-LqV~~~g--~W~~V~p~pg~lvVniGd~l~ 254 (333)
+.+.+|++. ......|.|.. .+|+++. +. .|| |.+...+ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 677888751 12456777762 6888875 21 244 6777544 6789999999999886431
Q ss_pred HhhCCcccCccceeecCCCCceEEEEEeec
Q 040559 255 ALSNGVYKSVEHRVVSHPKVERYSVAYFYC 284 (333)
Q Consensus 255 ~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 284 (333)
-.+|.|.. ..+.|+||+..+.
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEc
Confidence 16899976 4579999988665
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=90.28 E-value=1.2 Score=38.30 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=60.8
Q ss_pred HHHHHHHHHcCCCchhhhhccCCCceeeEEeecCCCCCCCCcccccccccCC-----------eeEEEEe--C-CCCc-e
Q 040559 163 RLAEYLARNLKIKSSYFRENCLPGSSYLRMNRYPPCPPSFEVLGLIPHTDSD-----------FLTILYQ--D-HVGG-L 227 (333)
Q Consensus 163 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~G-L 227 (333)
.|.+-|+..+|++.+. .-.+++++|.+.. ...+|.|+. .+|+++. | ..|| +
T Consensus 94 ~i~~Ri~~~~gl~~~~--------~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPASH--------GEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGGG--------BCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceecc--------ccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 3444444456776321 2247888886532 235676653 4788775 3 2344 3
Q ss_pred eeccCCceEEecCCCCceEEechhhHHHhhCCc-ccCccceeecCCCCceEEEEEeec
Q 040559 228 QLKKDGRWLSVKPNPDVLIVNVGDLFQALSNGV-YKSVEHRVVSHPKVERYSVAYFYC 284 (333)
Q Consensus 228 qV~~~g~W~~V~p~pg~lvVniGd~l~~~TnG~-~~s~~HRV~~~~~~~R~Si~~F~~ 284 (333)
.....+ +.|.|..|.+|+.-.- ..+|. -..++|+|.......|+++..+++
T Consensus 160 ~Fp~~~--~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 160 FFPKLN--LSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EETTTT--EEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred EecCCC--CEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 332322 7899999998875431 01222 246899997665568999988775
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=89.35 E-value=1.2 Score=38.28 Aligned_cols=88 Identities=22% Similarity=0.237 Sum_probs=54.7
Q ss_pred eeEEeecCCCCCCCCcccccccccC--------------CeeEEEEe--C-CCCc-eeeccCC-------------ceEE
Q 040559 189 YLRMNRYPPCPPSFEVLGLIPHTDS--------------DFLTILYQ--D-HVGG-LQLKKDG-------------RWLS 237 (333)
Q Consensus 189 ~lr~~~Yp~~~~~~~~~g~~~HtD~--------------g~lTlL~q--d-~~~G-LqV~~~g-------------~W~~ 237 (333)
.+++++|.+-. ...+|.|+ -.+|+|+. | ..|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 37788886532 23566664 24788864 3 2344 4443221 2488
Q ss_pred ecCCCCceEEechhhHHHhhCCcc-cCccceeecCCCCceEEEEEeecCC
Q 040559 238 VKPNPDVLIVNVGDLFQALSNGVY-KSVEHRVVSHPKVERYSVAYFYCPS 286 (333)
Q Consensus 238 V~p~pg~lvVniGd~l~~~TnG~~-~s~~HRV~~~~~~~R~Si~~F~~P~ 286 (333)
|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999887642 1123432 5789999766556899999887643
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=83.63 E-value=8 Score=33.45 Aligned_cols=83 Identities=14% Similarity=0.155 Sum_probs=53.5
Q ss_pred eeEEeecCCCCCCCCcccccccccC--------CeeEEEEeCCCCceeecc-C----------CceEEecCCCCceEEec
Q 040559 189 YLRMNRYPPCPPSFEVLGLIPHTDS--------DFLTILYQDHVGGLQLKK-D----------GRWLSVKPNPDVLIVNV 249 (333)
Q Consensus 189 ~lr~~~Yp~~~~~~~~~g~~~HtD~--------g~lTlL~qd~~~GLqV~~-~----------g~W~~V~p~pg~lvVni 249 (333)
.+-+|+|.+- .-++++|.|- .+.||-+-. ..=+.+.. . +..+.+...+|+++|+-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4568899763 2368888884 233333311 11233321 1 46899999999999999
Q ss_pred hhhHHHhhCCcccCccceeecCCCCceEEEEEee
Q 040559 250 GDLFQALSNGVYKSVEHRVVSHPKVERYSVAYFY 283 (333)
Q Consensus 250 Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~ 283 (333)
|++=..|..|.-+.. .....|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 999888876654321 1246899999865
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=81.88 E-value=3.2 Score=35.19 Aligned_cols=81 Identities=9% Similarity=0.094 Sum_probs=49.8
Q ss_pred eEEeecCCCCCCCCcccccccccCC--------eeEEEEeCCCCceeecc----------CCceEEecCCCCceEEechh
Q 040559 190 LRMNRYPPCPPSFEVLGLIPHTDSD--------FLTILYQDHVGGLQLKK----------DGRWLSVKPNPDVLIVNVGD 251 (333)
Q Consensus 190 lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~----------~g~W~~V~p~pg~lvVniGd 251 (333)
+-+|+|.+-. -++++|.|-. +++|-+- ...-+.+.+ .+..+.+...+|+++|+-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 4588997632 3688888862 2233221 111233321 23578899999999999999
Q ss_pred hHHHhhCCcccCccceeecCCCCceEEEEEe
Q 040559 252 LFQALSNGVYKSVEHRVVSHPKVERYSVAYF 282 (333)
Q Consensus 252 ~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F 282 (333)
+=..|..|.-+... ....|+|+.|-
T Consensus 176 ~q~~w~H~Ip~~~~------~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWYHSLPVRKK------VLAPRVNLTFR 200 (204)
T ss_dssp HHHHEEEEECCCTT------CCSCEEEEEEE
T ss_pred hhheeEeeccccCC------CCCCEEEEEee
Confidence 88888744322111 13689999884
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=80.18 E-value=3.8 Score=37.71 Aligned_cols=92 Identities=18% Similarity=0.215 Sum_probs=60.7
Q ss_pred eeEEeecCCCCCCCCcccccccccCC------eeEEEEeCCCCceeec-cCCceEEecCCCCceEEechhhHHHhhCCcc
Q 040559 189 YLRMNRYPPCPPSFEVLGLIPHTDSD------FLTILYQDHVGGLQLK-KDGRWLSVKPNPDVLIVNVGDLFQALSNGVY 261 (333)
Q Consensus 189 ~lr~~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~lvVniGd~l~~~TnG~~ 261 (333)
.+-+|.|.+- .++++|.|-. ++||=+ ....-+.+. ++|.++.+...+|+++|+-|++=..|..|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4568889762 2788999873 333333 112224443 4577999999999999999999999987765
Q ss_pred cCccceeec------------------CCCCceEEEEEeecCCC
Q 040559 262 KSVEHRVVS------------------HPKVERYSVAYFYCPSY 287 (333)
Q Consensus 262 ~s~~HRV~~------------------~~~~~R~Si~~F~~P~~ 287 (333)
+-...-+-. .+...|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 544333211 11346999999876654
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=79.67 E-value=13 Score=31.51 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=50.0
Q ss_pred eeEEeecCCCCCCCCcccccccccC-----C--eeEEEEeCCCCceeec---cCCceEEecCCCCceEEechhhHHHhhC
Q 040559 189 YLRMNRYPPCPPSFEVLGLIPHTDS-----D--FLTILYQDHVGGLQLK---KDGRWLSVKPNPDVLIVNVGDLFQALSN 258 (333)
Q Consensus 189 ~lr~~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLqV~---~~g~W~~V~p~pg~lvVniGd~l~~~Tn 258 (333)
.+-+|+|.+- . ++++|.|- + ++||-+- ...-+.+. +.+..+.+...+|+++|+-|++- .|
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~-- 175 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF-- 175 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC--
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce--
Confidence 3568889762 3 78999982 2 2333332 11224443 24678899999999999988872 23
Q ss_pred CcccCccceeecCC-------CCceEEEEEee
Q 040559 259 GVYKSVEHRVVSHP-------KVERYSVAYFY 283 (333)
Q Consensus 259 G~~~s~~HRV~~~~-------~~~R~Si~~F~ 283 (333)
.|.|.... +..|+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 36665443 24699999854
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=52.13 E-value=5 Score=38.22 Aligned_cols=56 Identities=13% Similarity=0.217 Sum_probs=42.0
Q ss_pred cCCCCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcC
Q 040559 32 DEECQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFH 91 (333)
Q Consensus 32 ~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 91 (333)
....-||.||++.+..+ .+.++..+.+++.|++.|.|. ||.+...+..+...+|-+
T Consensus 96 ~G~~~iP~i~f~di~~~---~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 96 QGDAVWPVLSYADIKAG---HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TTCCSSCEEEHHHHHHT---CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceecHHHhcCC---CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 45678999999987432 123456678899999988776 898888888887777753
No 17
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=49.31 E-value=8.6 Score=32.49 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=29.6
Q ss_pred CCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCC
Q 040559 36 QLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGI 74 (333)
Q Consensus 36 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 74 (333)
.||++++.... ..++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 79999987653 3467889999998888888999995
No 18
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=49.05 E-value=42 Score=30.38 Aligned_cols=46 Identities=15% Similarity=0.026 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHHhHccceEEEEcCCCC----HHHHHHHHHHHHHhcC
Q 040559 46 NFRSFDKWIEEMAEAASQWGFFQVMNHGIP----QKVLESMRKEQMKIFH 91 (333)
Q Consensus 46 ~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~----~~~~~~~~~~~~~fF~ 91 (333)
..+..+++.+++.+.++.-||..=.+|||+ .+-+..+.+++++|++
T Consensus 299 ~~g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 299 LPGPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 333566777778888888888766789974 6889999999999985
No 19
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=43.58 E-value=12 Score=31.73 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=29.7
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCC
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGI 74 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 74 (333)
..||++++.... ..++++.+.+++.+.-.+.|.|||+
T Consensus 121 ~~ip~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 121 NSIPCAPYATFG---TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp SCBCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CCcceeeCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 379999987653 3467888999998888888999995
No 20
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=42.60 E-value=8.6 Score=35.82 Aligned_cols=52 Identities=13% Similarity=0.169 Sum_probs=38.5
Q ss_pred CCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcCC
Q 040559 36 QLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFHQ 92 (333)
Q Consensus 36 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~l 92 (333)
++|.||++.+.. ..+...++.+|+.++|++.+.|..++.+... +.++.|=.+
T Consensus 122 ~~~~~~~~~~l~--~d~~~~~~~~~l~~~Gvv~frg~~~~~~~~~---~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR--YDEHAYKWLSTLKKVGIVRLTGASDKPGEVS---KLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH--CHHHHHHHHHHHHHHSEEEEECCCSSTTHHH---HHHHHHSCC
T ss_pred CCCccCHHHHhc--CHHHHHHHHHHHHhcCEEEEeCCCCCHHHHH---HHHHHhCCC
Confidence 799999987653 2455788999999999999999988755443 345555433
No 21
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=38.35 E-value=17 Score=31.14 Aligned_cols=37 Identities=8% Similarity=0.028 Sum_probs=29.8
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCC
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGI 74 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 74 (333)
..||++++.... ..++++++.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPG---SVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTT---CHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 479999987553 3467888999998888888999995
No 22
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=38.32 E-value=16 Score=30.60 Aligned_cols=51 Identities=14% Similarity=0.063 Sum_probs=35.6
Q ss_pred CCCceE-eCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCC---C-----HHHHHHHHHHHHH
Q 040559 35 CQLPSI-DLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGI---P-----QKVLESMRKEQMK 88 (333)
Q Consensus 35 ~~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi---~-----~~~~~~~~~~~~~ 88 (333)
..||++ ++.... ..++++.+.+++.+.-.+.|.|||+ . .+-+++++..+..
T Consensus 116 ~~ip~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 116 KEVPVLAPKTVSA---TEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp SCEEEECCSCCSS---SHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCceEecCCCCCC---cHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 379999 776543 3467888999998888888999994 3 0445555554443
No 23
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=37.29 E-value=17 Score=30.50 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=27.9
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccc---eEEEEcCCC
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWG---FFQVMNHGI 74 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~G---Ff~l~nhGi 74 (333)
..||++++. .+..++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~----~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE----QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC----SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC----CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 378998874 145678889999998765 788889995
No 24
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=36.51 E-value=30 Score=30.16 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=34.1
Q ss_pred CCCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHH
Q 040559 34 ECQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLES 81 (333)
Q Consensus 34 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~ 81 (333)
.++|+-||++...+ .+..++|.+++.++|++.+.+..++.+...+
T Consensus 15 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~~~~ 59 (283)
T 1otj_A 15 GAQISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQQQRA 59 (283)
T ss_dssp CEEEESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHHHHHH
T ss_pred eEEEECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHHHHH
Confidence 35677889988442 2347889999999999999998887655443
No 25
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=35.93 E-value=37 Score=19.29 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhHccceEE
Q 040559 50 FDKWIEEMAEAASQWGFFQ 68 (333)
Q Consensus 50 ~~~~~~~l~~A~~~~GFf~ 68 (333)
..++++.|.-.|.+-|||+
T Consensus 8 Gs~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFY 26 (30)
T ss_dssp THHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHHhccCcccc
Confidence 3567889999999999998
No 26
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=34.94 E-value=34 Score=30.20 Aligned_cols=50 Identities=6% Similarity=-0.033 Sum_probs=35.5
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCC-CCHHHHHHHHHHHHHhc
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHG-IPQKVLESMRKEQMKIF 90 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhG-i~~~~~~~~~~~~~~fF 90 (333)
++|+-||++...+ .+..++|.+++.++|++.+.|.. ++.+. ..+.++.|=
T Consensus 26 aei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~~~---~~~~~~~fG 76 (301)
T 1oih_A 26 AEIRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDDQS---QEGFAKLLG 76 (301)
T ss_dssp EEEESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHHH---HHHHHHTTS
T ss_pred eEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHHH---HHHHHHHhC
Confidence 4567778887432 33478899999999999999987 88543 334455554
No 27
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=32.61 E-value=18 Score=31.88 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=29.4
Q ss_pred CCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCC
Q 040559 36 QLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGI 74 (333)
Q Consensus 36 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 74 (333)
.||++++.... ..++++++.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPG---TDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSS---SHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCC---CHHHHHHHHHHHccCCEEEEcCCCc
Confidence 69999886543 3467889999999988899999995
No 28
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=27.34 E-value=29 Score=30.56 Aligned_cols=38 Identities=11% Similarity=0.079 Sum_probs=29.9
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCC
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGI 74 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi 74 (333)
..||++|+..... ..++++.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~--~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIAL--DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSC--CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCC--CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 4689999876531 3456888999999999999999995
No 29
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=26.56 E-value=1.6e+02 Score=29.11 Aligned_cols=104 Identities=18% Similarity=0.249 Sum_probs=58.4
Q ss_pred HHHHHHHHHHcCCCchhhhhccCCCceeeEEeecCCCCCCCCcccccccccC-C--eeEEEEe--C-------CCCc-ee
Q 040559 162 ERLAEYLARNLKIKSSYFRENCLPGSSYLRMNRYPPCPPSFEVLGLIPHTDS-D--FLTILYQ--D-------HVGG-LQ 228 (333)
Q Consensus 162 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~-g--~lTlL~q--d-------~~~G-Lq 228 (333)
..++..|+...|++. +.+....+.+.+|.+- .....|.|. + .||+++. + ..|| |+
T Consensus 104 ~~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~ 171 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGK------LSGSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLR 171 (633)
T ss_dssp HHHHHHHHHHHTCCC------CCSSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEE
T ss_pred HHHHHHHHHHhCCcc------cCCCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEE
Confidence 344556666667632 1001112556677543 245778884 2 3555552 2 1244 87
Q ss_pred eccC--------CceEEecCCCCceEEechhhHHHhhC-CcccCccceeecC-CCCceEEEEEee-cCCC
Q 040559 229 LKKD--------GRWLSVKPNPDVLIVNVGDLFQALSN-GVYKSVEHRVVSH-PKVERYSVAYFY-CPSY 287 (333)
Q Consensus 229 V~~~--------g~W~~V~p~pg~lvVniGd~l~~~Tn-G~~~s~~HRV~~~-~~~~R~Si~~F~-~P~~ 287 (333)
++.. .-...|.|..|++|+.. +. + ..+|.|... +++.|+||+-.+ .|..
T Consensus 172 Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~-------vsp~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 172 LFPSILPNVPHSDPSAKLVPQFNQIAFFK-------VLPG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ECCEEETTEECSSCSEEECCCTTEEEEEE-------CCTT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EecCCCcCCCCCCceEEEecCCCeEEEEE-------cCCC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 7732 24678999999998864 21 1 256866322 167999997655 4444
No 30
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=25.84 E-value=67 Score=20.31 Aligned_cols=24 Identities=8% Similarity=0.178 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCchhh
Q 040559 156 KAANLAERLAEYLARNLKIKSSYF 179 (333)
Q Consensus 156 ~~~~l~~~ll~~la~~Lgl~~~~f 179 (333)
+-.+++..|.++++..||.+++..
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 356788999999999999998644
No 31
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=25.64 E-value=49 Score=28.97 Aligned_cols=50 Identities=12% Similarity=0.122 Sum_probs=36.4
Q ss_pred CCCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHh
Q 040559 34 ECQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKI 89 (333)
Q Consensus 34 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 89 (333)
.++|.=||++...+ .+..++|.+|+.++|.+.+.|..++.+... +.++.|
T Consensus 13 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~gvv~fR~q~l~~~~~~---~fa~~f 62 (277)
T 3pvj_A 13 GAQISGVDISRDIS---AEERDAIEQALLQHQVLFLRDQPINPEQQA---RFAARF 62 (277)
T ss_dssp CEEEESCCTTSCCC---HHHHHHHHHHHHHHSEEEESSCCCCHHHHH---HHHGGG
T ss_pred eEEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHHHH---HHHHHh
Confidence 35677789987432 345788999999999999999988865443 345554
No 32
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.92 E-value=19 Score=24.97 Aligned_cols=40 Identities=5% Similarity=0.046 Sum_probs=32.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhcc
Q 040559 144 NNPRSTIGLFSTKAANLAERLAEYLARNLKIKSSYFRENC 183 (333)
Q Consensus 144 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 183 (333)
.+-+..++.|+..-.+-...-+..||..+||+.+.....|
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 3457888999988888888888999999999998766555
No 33
>2ld7_A Histone deacetylase complex subunit SAP30; transcription; NMR {Mus musculus}
Probab=22.06 E-value=1.7e+02 Score=21.26 Aligned_cols=57 Identities=14% Similarity=0.262 Sum_probs=38.4
Q ss_pred CCCCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHHHHhcCCChhhhhhh
Q 040559 33 EECQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQMKIFHQPFRKKSEQ 100 (333)
Q Consensus 33 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lP~e~K~~~ 100 (333)
.....|-|||+.|. ...|+.=++.++. =+..+++.+.+.. ...+-|-++|..|+.-+
T Consensus 15 ~~~~~p~vdf~kL~-------~~tLrrY~r~y~L--~~~~~~sK~qLa~--aV~kHF~s~~VdE~evI 71 (94)
T 2ld7_A 15 QDIDTPEVDLYQLQ-------VNTLRRYKRHFKL--PTRPGLNKAQLVE--IVGCHFKSIPVNEKDTL 71 (94)
T ss_dssp CSSCCCCCCCSSSC-------HHHHHHHHHHTTC--CCCSSCCHHHHHH--HHHHHHTTCCCCHHHHH
T ss_pred ccCCCCCcCHHHCC-------HHHHHHHHHHhCC--CCCCCCCHHHHHH--HHHHHHHcCCCCHHHHH
Confidence 34678999999985 4567788888876 2455676553332 33466778888777654
No 34
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.01 E-value=94 Score=19.82 Aligned_cols=24 Identities=29% Similarity=0.261 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHcCCCchhhh
Q 040559 157 AANLAERLAEYLARNLKIKSSYFR 180 (333)
Q Consensus 157 ~~~l~~~ll~~la~~Lgl~~~~f~ 180 (333)
-.+++..|.++++..||.++++..
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHhCCCcccEE
Confidence 467888999999999999986543
No 35
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=21.22 E-value=84 Score=20.44 Aligned_cols=38 Identities=18% Similarity=0.432 Sum_probs=28.0
Q ss_pred eEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcCCCCHHHHHHHHHHH
Q 040559 39 SIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNHGIPQKVLESMRKEQ 86 (333)
Q Consensus 39 vIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~ 86 (333)
++|++.+. +.+|.+.|+..| |.-.|.-.++++++.+..
T Consensus 7 ~~~l~klk-------V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l 44 (55)
T 2do1_A 7 GVELHKLK-------LAELKQECLARG---LETKGIKQDLIHRLQAYL 44 (55)
T ss_dssp CCCTTTSC-------HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHH
T ss_pred ccCHHHCc-------HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHH
Confidence 35666664 677999999999 455677788888887643
No 36
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=20.78 E-value=52 Score=18.01 Aligned_cols=14 Identities=21% Similarity=0.527 Sum_probs=10.8
Q ss_pred ceeeccCCceEEec
Q 040559 226 GLQLKKDGRWLSVK 239 (333)
Q Consensus 226 GLqV~~~g~W~~V~ 239 (333)
-..|.++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35678999999864
No 37
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=20.32 E-value=88 Score=27.73 Aligned_cols=50 Identities=8% Similarity=-0.047 Sum_probs=35.9
Q ss_pred CCCceEeCCCCCCCCHHHHHHHHHHHhHccceEEEEcC-CCCHHHHHHHHHHHHHhc
Q 040559 35 CQLPSIDLARLNFRSFDKWIEEMAEAASQWGFFQVMNH-GIPQKVLESMRKEQMKIF 90 (333)
Q Consensus 35 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFf~l~nh-Gi~~~~~~~~~~~~~~fF 90 (333)
++|+=||++...+ .+..++|.+|+.++|.+.+.|. .++.+... +.++.|=
T Consensus 20 aei~gvdl~~~L~---d~~~~~l~~al~~~gvv~fR~q~~l~~~~~~---~fa~~fG 70 (301)
T 3r1j_A 20 ARVDGVRLGGDLD---DATVEQIRRALLTHKVIFFRHQHHLDDSRQL---EFARLLG 70 (301)
T ss_dssp EEEESCCCSTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHHHHH---HHHHHHS
T ss_pred ceEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHHHHH---HHHHhcC
Confidence 5677788884322 3457889999999999999998 78875443 3455553
Done!