Query 040567
Match_columns 162
No_of_seqs 108 out of 1058
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 15:29:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040567.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040567hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d7n_A Filamin-C; beta-sandwic 92.9 0.55 1.9E-05 29.6 6.9 55 13-67 21-79 (93)
2 2ee9_A Filamin-B; beta-sandwic 92.6 0.41 1.4E-05 30.4 6.0 54 13-66 29-86 (95)
3 2p9r_A Alpha-2-M, alpha-2-macr 88.8 2.4 8.1E-05 26.6 7.2 47 11-57 32-86 (102)
4 2dlg_A Filamin-B; beta-sandwic 88.5 1.2 4E-05 28.5 5.5 54 13-66 30-87 (102)
5 1olm_A SEC14-like protein 2; l 87.9 0.69 2.4E-05 36.6 5.0 32 39-70 351-383 (403)
6 2ee6_A Filamin-B; beta-sandwic 87.0 2.4 8.2E-05 26.9 6.3 52 14-66 42-96 (105)
7 2d7p_A Filamin-C; beta-sandwic 85.6 2.2 7.7E-05 27.6 5.6 52 15-66 42-97 (112)
8 2ds4_A Tripartite motif protei 85.0 5.5 0.00019 25.2 7.5 52 14-65 49-106 (113)
9 3irp_X URO-adherence factor A; 84.9 1.3 4.5E-05 35.7 5.1 43 14-56 330-372 (429)
10 4dzg_A PLIG; lysozyme inhibito 83.7 0.5 1.7E-05 30.9 1.8 43 15-57 51-96 (114)
11 2dj4_A Filamin-B; beta-sandwic 83.6 3.5 0.00012 26.2 5.9 53 13-65 42-98 (108)
12 2dmc_A Filamin-B; beta-sandwic 83.5 1.4 4.7E-05 28.8 3.9 54 13-66 44-101 (116)
13 2eea_A Filamin-B; beta-sandwic 83.1 6.5 0.00022 25.2 7.1 53 14-67 52-107 (115)
14 3c12_A FLGD, flagellar protein 82.9 2.9 9.9E-05 28.0 5.5 43 14-56 39-92 (138)
15 3d33_A Domain of unknown funct 82.7 3.4 0.00012 26.7 5.5 45 12-56 47-96 (108)
16 3isy_A Bsupi, intracellular pr 82.4 3.1 0.00011 27.5 5.3 22 11-32 39-60 (120)
17 2dmb_A Filamin-B; beta-sandwic 82.2 3.9 0.00013 26.9 5.8 55 13-67 42-100 (124)
18 2nqc_A Filamin-C; immunoglobul 82.0 5.9 0.0002 26.6 6.7 53 14-67 76-131 (138)
19 3cnk_A Filamin-A; FLNA24, X-RA 81.8 4.4 0.00015 24.7 5.7 45 13-57 29-76 (89)
20 1qfh_A Protein (gelation facto 81.3 4.4 0.00015 28.9 6.3 52 13-65 134-189 (212)
21 1v05_A Filamin C; actin-bindin 80.9 5.1 0.00017 24.8 5.8 45 13-57 36-83 (96)
22 2k9u_A Gamma filamin; cytoskel 80.8 7.8 0.00027 25.0 6.9 53 13-66 48-103 (119)
23 2w0p_A Filamin-A; alternative 80.7 6.1 0.00021 24.3 6.1 42 15-57 35-78 (94)
24 1wlh_A Gelation factor; ABP-12 79.9 6.6 0.00023 29.7 7.2 52 14-66 234-289 (311)
25 2d7m_A Filamin-C; beta-sandwic 79.5 4.2 0.00015 26.1 5.2 54 14-67 44-101 (115)
26 2bp3_A Filamin A; structural p 77.4 8 0.00027 23.9 5.9 44 13-57 36-81 (97)
27 3osv_A Flagellar basal-BODY RO 76.7 5 0.00017 26.8 5.0 43 14-56 37-90 (138)
28 3rgh_A Filamin-A; cell adhesio 76.1 8.4 0.00029 24.1 5.8 43 14-56 39-84 (100)
29 3sd2_A Putative member of DUF3 75.1 6.5 0.00022 25.1 4.9 47 12-58 43-92 (101)
30 2dic_A Filamin-B; beta-sandwic 75.1 6.4 0.00022 24.8 5.0 50 15-65 43-95 (105)
31 2k7p_A Filamin-A; IG-like, ABP 74.5 5.3 0.00018 28.1 4.9 44 14-57 34-80 (188)
32 2eec_A Filamin-B; beta-sandwic 73.9 11 0.00037 24.7 6.1 54 14-68 52-108 (125)
33 2k7p_A Filamin-A; IG-like, ABP 73.6 8.5 0.00029 27.0 5.8 43 14-57 128-172 (188)
34 4b7l_A Filamin-B; structural p 72.0 8.1 0.00028 30.0 5.8 43 15-57 288-335 (347)
35 2k7q_A Filamin-A; IG-like, ABP 71.1 8.6 0.00029 27.0 5.4 51 15-66 129-182 (191)
36 1jcd_A Major outer membrane li 69.5 12 0.00042 20.7 5.9 44 87-130 5-48 (52)
37 2di8_A Filamin-B; beta-sandwic 69.3 19 0.00065 22.9 6.7 53 15-68 43-98 (111)
38 4g9s_B Inhibitor of G-type lys 68.8 7.6 0.00026 24.8 4.3 40 17-56 50-92 (111)
39 2dia_A Filamin-B; beta-sandwic 68.2 13 0.00043 23.7 5.3 54 14-67 42-99 (113)
40 2k7q_A Filamin-A; IG-like, ABP 68.1 9.4 0.00032 26.8 5.0 46 12-57 29-77 (191)
41 2e9j_A Filamin-B; beta-sandwic 68.0 12 0.00042 24.0 5.3 52 14-65 54-109 (119)
42 2di9_A Filamin-B; beta-sandwic 66.5 24 0.00084 23.1 7.1 52 14-66 62-116 (131)
43 2dib_A Filamin-B; beta-sandwic 65.8 6.8 0.00023 25.6 3.7 54 13-66 56-113 (128)
44 2d7o_A Filamin-C; beta-sandwic 64.6 8.7 0.0003 24.5 3.9 54 14-68 42-98 (111)
45 2j3s_A Filamin-A; cytoskeleton 63.2 6.7 0.00023 29.4 3.7 44 13-56 130-176 (288)
46 2x5p_A FBA2, fibronectin bindi 63.0 11 0.00036 24.8 4.1 40 15-56 44-83 (121)
47 3hd7_B Syntaxin-1A; membrane p 61.8 28 0.00096 22.2 8.9 20 86-105 21-40 (109)
48 1qle_D Cytochrome AA3, ccytoch 61.5 16 0.00056 19.4 4.2 28 119-146 13-40 (43)
49 4fxk_A Complement C4 beta chai 61.1 23 0.00078 29.4 6.9 47 10-56 149-201 (656)
50 3hrz_A Cobra venom factor; ser 61.0 19 0.00065 30.3 6.4 47 10-56 133-182 (627)
51 2hr0_A Complement C3 beta chai 60.0 31 0.0011 28.8 7.5 48 9-56 134-189 (645)
52 1m56_D Cytochrome C oxidase; m 57.4 22 0.00076 19.6 4.8 29 119-147 21-49 (51)
53 1wlh_A Gelation factor; ABP-12 54.3 17 0.00057 27.4 4.5 45 13-57 142-189 (311)
54 3fn2_A Putative sensor histidi 51.3 25 0.00086 22.4 4.2 38 17-54 51-91 (106)
55 1gl2_D Syntaxin 8, vesicle tra 48.8 35 0.0012 19.3 5.8 46 86-131 9-54 (65)
56 3afg_A Subtilisin-like serine 48.3 35 0.0012 28.1 5.8 47 13-59 458-506 (539)
57 1qfh_A Protein (gelation facto 48.1 46 0.0016 23.4 5.9 45 13-57 43-90 (212)
58 2nps_D Syntaxin-6; vesicle fus 44.5 49 0.0017 19.8 6.6 47 85-131 18-64 (82)
59 3ogl_Q JAZ1 incomplete degron 42.4 9.5 0.00033 17.0 0.9 11 150-160 8-18 (21)
60 3e8v_A Possible transglutamina 42.1 51 0.0017 20.0 4.4 18 35-52 40-66 (82)
61 3swy_A Cyclic nucleotide-gated 41.9 41 0.0014 18.1 5.6 19 90-108 9-27 (46)
62 2pnv_A Small conductance calci 40.9 41 0.0014 17.8 3.4 20 89-108 19-38 (43)
63 1wmd_A Protease; alpha-beta hy 38.9 43 0.0015 26.4 4.9 43 14-56 366-419 (434)
64 3cu7_A Complement C5; Mg domai 38.5 44 0.0015 31.5 5.5 49 9-57 152-207 (1676)
65 3hd7_A Vesicle-associated memb 37.0 72 0.0025 19.5 9.3 31 101-131 34-64 (91)
66 3okq_A BUD site selection prot 36.8 95 0.0032 20.9 6.3 41 100-140 90-130 (141)
67 4acq_A Alpha-2-macroglobulin; 36.2 1.1E+02 0.0036 28.6 7.5 48 9-56 132-187 (1451)
68 1sfc_D Protein (SNAP-25B), pro 36.1 72 0.0025 19.3 5.8 46 86-131 29-74 (87)
69 3a0c_A Mannose/sialic acid-bin 35.5 57 0.002 20.4 4.2 13 18-30 63-75 (110)
70 2pn5_A TEP1R, thioester-contai 35.4 1.1E+02 0.0037 28.0 7.4 43 14-56 135-184 (1325)
71 3prx_B Cobra venom factor; imm 35.1 72 0.0025 30.2 6.2 47 10-56 155-204 (1642)
72 1n7s_D SNAP-25A; neuronal snar 34.9 63 0.0022 18.3 5.8 47 85-131 9-55 (66)
73 1gu3_A Endoglucanase C; carboh 34.3 29 0.001 23.3 2.8 7 50-56 124-130 (149)
74 3swf_A CGMP-gated cation chann 33.7 76 0.0026 18.8 5.4 26 88-113 9-34 (74)
75 3bqa_A Sensor protein PHOQ; hi 33.1 29 0.00099 23.4 2.5 41 16-56 42-85 (148)
76 2knc_A Integrin alpha-IIB; tra 32.3 68 0.0023 17.8 4.2 20 141-160 24-43 (54)
77 2l8s_A Integrin alpha-1; trans 32.1 68 0.0023 17.8 4.2 20 141-160 21-40 (54)
78 2j3s_A Filamin-A; cytoskeleton 32.0 1.1E+02 0.0036 22.7 5.8 43 14-57 228-272 (288)
79 2k8e_A UPF0339 protein YEGP; p 31.4 1.1E+02 0.0039 20.1 6.3 45 15-59 30-92 (130)
80 2oxj_A Hybrid alpha/beta pepti 31.1 54 0.0018 16.3 4.4 26 95-120 3-28 (34)
81 2q0z_X Protein Pro2281; SEC63, 30.9 1.7E+02 0.006 22.1 7.1 58 13-70 264-329 (339)
82 1l4a_D S-SNAP25 fusion protein 29.8 96 0.0033 18.8 4.6 45 86-130 30-74 (87)
83 3ogk_Q JAZ1 incomplete degron 29.7 17 0.00057 16.4 0.6 10 151-160 4-13 (22)
84 2b39_A C3; thioester, immune d 28.9 80 0.0027 29.8 5.5 48 9-56 155-210 (1661)
85 3kpt_A Collagen adhesion prote 28.6 47 0.0016 25.7 3.4 40 15-54 268-313 (355)
86 2lme_A Adhesin YADA; trimeric 27.8 67 0.0023 20.2 3.5 26 84-109 7-32 (105)
87 1b2p_A Protein (lectin); manno 27.0 1.2E+02 0.004 19.2 4.7 13 18-30 73-85 (119)
88 2k1a_A Integrin alpha-IIB; sin 26.5 43 0.0015 17.6 2.0 19 142-160 23-41 (42)
89 1gd2_E Transcription factor PA 26.0 1E+02 0.0036 17.9 4.2 35 85-119 28-62 (70)
90 1dip_A Delta-sleep-inducing pe 25.8 1.1E+02 0.0037 18.1 4.5 33 82-114 11-43 (78)
91 1kd8_B GABH BLL, GCN4 acid bas 25.3 74 0.0025 16.0 4.7 20 89-108 4-23 (36)
92 3c3f_A Alpha/beta peptide with 25.0 72 0.0025 15.8 4.0 19 89-107 4-22 (34)
93 2dpf_A Curculin; sweet taste, 24.9 1.1E+02 0.0038 19.1 4.2 10 46-55 82-91 (115)
94 3l4f_A RHO guanine nucleotide 24.4 1.1E+02 0.0036 17.5 7.0 41 90-130 4-47 (61)
95 2d73_A Alpha-glucosidase SUSB; 23.8 61 0.0021 28.0 3.4 44 5-48 10-53 (738)
96 2akf_A Coronin-1A; coiled coil 23.5 72 0.0025 15.3 5.0 15 91-105 4-18 (32)
97 3pay_A Putative adhesin; struc 23.1 83 0.0028 23.9 3.8 44 13-56 35-84 (314)
98 2v2f_A Penicillin binding prot 22.6 51 0.0018 14.8 1.7 13 18-30 7-19 (26)
99 2yko_A LINE-1 ORF1P; RNA-bindi 22.1 2.3E+02 0.008 20.6 6.4 25 87-111 7-31 (233)
100 1f7l_A Holo-(acyl carrier prot 21.9 1.5E+02 0.0052 18.4 5.0 39 15-54 76-114 (121)
101 3plu_A Ubiquitin-like modifier 21.8 69 0.0024 19.9 2.6 25 5-29 10-35 (93)
102 3c3g_A Alpha/beta peptide with 21.3 88 0.003 15.4 4.4 13 96-108 3-15 (33)
103 3gf8_A Putative polysaccharide 21.1 91 0.0031 23.4 3.7 44 13-56 36-84 (296)
104 2z5i_A TM, general control pro 20.8 1.1E+02 0.0039 16.6 5.9 38 91-128 10-47 (52)
105 3jqw_A COLH protein, collagena 20.6 1.8E+02 0.0061 18.7 7.3 46 13-58 60-106 (121)
106 2dgc_A Protein (GCN4); basic d 20.4 1.2E+02 0.0042 17.1 3.3 28 85-112 29-56 (63)
No 1
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.86 E-value=0.55 Score=29.55 Aligned_cols=55 Identities=16% Similarity=0.221 Sum_probs=37.7
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEEE
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTVE 67 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~ 67 (162)
..++.+.|.+|+|..+.-. .+..+| .++|++++.|.|.+++.-.... .+..+.+.
T Consensus 21 ~~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~ 79 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFY 79 (93)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEEE
T ss_pred CCCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEEE
Confidence 4579999999999865321 122345 5668899999999999866544 44454443
No 2
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.58 E-value=0.41 Score=30.35 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=36.6
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
..++.+.|.+|+|..+--. .+..+| .++|++.+.|.|++|+.-.... .+..+.+
T Consensus 29 ~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~GSPF~v 86 (95)
T 2ee9_A 29 KGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQF 86 (95)
T ss_dssp TTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSCBCTTCSEEE
T ss_pred CCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCEECCCCCeEE
Confidence 3379999999999865322 122345 4667889999999999866544 3445443
No 3
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=88.80 E-value=2.4 Score=26.58 Aligned_cols=47 Identities=23% Similarity=0.265 Sum_probs=31.2
Q ss_pred CCCc-eEEEEEECCCCCeEEecccc--ccccE--EEEe---eccCcEEEEEecCC
Q 040567 11 PDTH-KLTVKVTSPYGNSYHQGDHV--ESGNF--AFTA---AEAGDYTACFWSPE 57 (162)
Q Consensus 11 ~~~~-~i~~~i~~p~g~~v~~~~~~--~~g~~--~f~~---~~~G~y~~Cf~n~~ 57 (162)
|... .+.+.|.||+|+.+.+.... ..|.+ +|.. ...|.|++......
T Consensus 32 p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 32 PLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp BCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 4434 47999999999998874322 24443 3444 24699999998653
No 4
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.53 E-value=1.2 Score=28.46 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=36.8
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
...+.+.|.+|+|..+--. .+..+| ..+|++.+.|.|.+.+.-.... ....+.+
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v 87 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQF 87 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSSBCSSCSEEE
T ss_pred CCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCEeCCCCCeEE
Confidence 4578999999999865432 222345 4568889999999998866544 3445443
No 5
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=87.90 E-value=0.69 Score=36.60 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=24.4
Q ss_pred EEEEeeccCcEEEEEecCCCC-CCceEEEEEEe
Q 040567 39 FAFTAAEAGDYTACFWSPEHN-PPATVTVEFEW 70 (162)
Q Consensus 39 ~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~~~~ 70 (162)
=+|.+.++|.|.+||+|+.|. ..+.+...+.+
T Consensus 351 G~~~~~~~G~y~l~fdNs~S~~~~k~l~y~v~v 383 (403)
T 1olm_A 351 GTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEV 383 (403)
T ss_dssp EEEECCSCEEEEEEEECTTCCCCSEEEEEEEEE
T ss_pred CEEEcCCCeEEEEEEeccccceeceEEEEEEEE
Confidence 357899999999999999886 56665544444
No 6
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.04 E-value=2.4 Score=26.91 Aligned_cols=52 Identities=21% Similarity=0.361 Sum_probs=35.8
Q ss_pred ceEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
..+.+.|.+|.+..+ +-.+..+| .++|++.++|.|.+++.-.... ....+.+
T Consensus 42 ~~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 96 (105)
T 2ee6_A 42 GGLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLV 96 (105)
T ss_dssp CCEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEETTEECTTCSEEE
T ss_pred CcEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEECCEECCCcCEEE
Confidence 468899999998655 32334455 6788999999999998865433 3344443
No 7
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=85.56 E-value=2.2 Score=27.56 Aligned_cols=52 Identities=15% Similarity=0.198 Sum_probs=34.6
Q ss_pred eEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 15 KLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
.+.+.|.+|+|..+--. .+...| ..+|++++.|.|.+.+.-.... ....+.+
T Consensus 42 ~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g~~I~GSPF~v 97 (112)
T 2d7p_A 42 VIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKI 97 (112)
T ss_dssp CEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESSCBCTTCSEEE
T ss_pred CEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECCeEcCCCCEEE
Confidence 78889999999754321 122344 5668889999999888766543 3445443
No 8
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.99 E-value=5.5 Score=25.22 Aligned_cols=52 Identities=19% Similarity=0.264 Sum_probs=31.6
Q ss_pred ceEEEEEECCCC--CeEE-ecccccccc--EEEEeeccCcEEEEEecCCCC-CCceEE
Q 040567 14 HKLTVKVTSPYG--NSYH-QGDHVESGN--FAFTAAEAGDYTACFWSPEHN-PPATVT 65 (162)
Q Consensus 14 ~~i~~~i~~p~g--~~v~-~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~~~-~~~~~~ 65 (162)
..+.+.|.+|++ ..+. .-.+..+|. ++|++.++|.|.+++.-.... ....+.
T Consensus 49 ~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g~~i~gSPF~ 106 (113)
T 2ds4_A 49 DNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFT 106 (113)
T ss_dssp CCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESSCBCTTCSEE
T ss_pred ceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEE
Confidence 468888888886 2221 222234454 557888889998888766443 333433
No 9
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=84.90 E-value=1.3 Score=35.71 Aligned_cols=43 Identities=23% Similarity=0.407 Sum_probs=37.9
Q ss_pred ceEEEEEECCCCCeEEeccccccccEEEEeeccCcEEEEEecC
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSP 56 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g~~~f~~~~~G~y~~Cf~n~ 56 (162)
.++.|.+++|+|.++....-...|.|.|.--.+|.|.+.|..+
T Consensus 330 ~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 330 AGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp TTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred CCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 3799999999999887766668999999999999999999866
No 10
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=83.66 E-value=0.5 Score=30.95 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=30.4
Q ss_pred eEEEEEECCCCCe---EEeccccccccEEEEeeccCcEEEEEecCC
Q 040567 15 KLTVKVTSPYGNS---YHQGDHVESGNFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 15 ~i~~~i~~p~g~~---v~~~~~~~~g~~~f~~~~~G~y~~Cf~n~~ 57 (162)
.+-|.|.+|+|+. ++..+....+.|+-..+.+|.|++-+....
T Consensus 51 ~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~r 96 (114)
T 4dzg_A 51 NANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQMR 96 (114)
T ss_dssp TCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECCH
T ss_pred cEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEecc
Confidence 4667788888863 343333334689999999999999998773
No 11
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=83.57 E-value=3.5 Score=26.23 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=34.3
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEE
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVT 65 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~ 65 (162)
+..+.+.|.+|+|..+.-. .+..+| .++|++.+.|.|.+.+.-.... ....+.
T Consensus 42 ~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~ 98 (108)
T 2dj4_A 42 LAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFK 98 (108)
T ss_dssp SCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEESSSBCTTCSEE
T ss_pred CceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEE
Confidence 3468899999999654322 222345 4557888899999988865443 333444
No 12
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=83.45 E-value=1.4 Score=28.83 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=36.5
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
...+++.|.+|+|..+--. .+..+| ..+|++++.|.|.+.+.-.... ....+.+
T Consensus 44 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g~~I~GSPF~v 101 (116)
T 2dmc_A 44 LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSI 101 (116)
T ss_dssp STTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSSSBCTTCSEEE
T ss_pred CCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECCEECCCCCeEE
Confidence 4578999999999754321 122344 5678999999999998866544 4445443
No 13
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.12 E-value=6.5 Score=25.23 Aligned_cols=53 Identities=15% Similarity=0.266 Sum_probs=35.2
Q ss_pred ceEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEEE
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTVE 67 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~ 67 (162)
..+.+.|.+|++..+ +-.+..+| .++|++.++|.|.+.+.-.... ....+.+.
T Consensus 52 ~~l~v~v~~p~~~~~-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 107 (115)
T 2eea_A 52 GGLDLAIEGPSKAEI-SCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAK 107 (115)
T ss_dssp SCEEEEEESSSCCEE-CCBCCSSSEEEEEEECSSCSCEEEEEEESSSBCTTCSEEEE
T ss_pred CceEEEEECCCCceE-EEEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEE
Confidence 468899999998544 22334456 5668889999999998855433 34444443
No 14
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=82.91 E-value=2.9 Score=28.01 Aligned_cols=43 Identities=19% Similarity=0.216 Sum_probs=32.6
Q ss_pred ceEEEEEECCCCCeEEecc--ccccccEEEEee---------ccCcEEEEEecC
Q 040567 14 HKLTVKVTSPYGNSYHQGD--HVESGNFAFTAA---------EAGDYTACFWSP 56 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~--~~~~g~~~f~~~---------~~G~y~~Cf~n~ 56 (162)
..+.+.|+|.+|++++.-. ..+.|.+.|... .+|.|++.+.-.
T Consensus 39 ~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 39 GFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp EEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 4799999999999998754 245677777652 258999998754
No 15
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=82.72 E-value=3.4 Score=26.71 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=34.0
Q ss_pred CCceEEEEEE-CCCCCeEEecccccc--ccEEEEe--eccCcEEEEEecC
Q 040567 12 DTHKLTVKVT-SPYGNSYHQGDHVES--GNFAFTA--AEAGDYTACFWSP 56 (162)
Q Consensus 12 ~~~~i~~~i~-~p~g~~v~~~~~~~~--g~~~f~~--~~~G~y~~Cf~n~ 56 (162)
+-.++.+.|+ +.+|+++|++.-... ..+.+.. ..+|+|.+=+.+.
T Consensus 47 ~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~ 96 (108)
T 3d33_A 47 PDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGT 96 (108)
T ss_dssp CCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEE
T ss_pred cCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeC
Confidence 4558999999 889999998764332 3455655 4689999999887
No 16
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=82.40 E-value=3.1 Score=27.46 Aligned_cols=22 Identities=9% Similarity=-0.013 Sum_probs=19.0
Q ss_pred CCCceEEEEEECCCCCeEEecc
Q 040567 11 PDTHKLTVKVTSPYGNSYHQGD 32 (162)
Q Consensus 11 ~~~~~i~~~i~~p~g~~v~~~~ 32 (162)
++++..+|.|+|++|+.++...
T Consensus 39 ~Sgq~~Df~v~d~~G~~VwrwS 60 (120)
T 3isy_A 39 STGQKFELVVYDSEHKERYRYS 60 (120)
T ss_dssp SSSCCEEEEEECTTCCEEEETT
T ss_pred CCCCEEEEEEECCCCCEEEEcc
Confidence 5788999999999999998554
No 17
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=82.25 E-value=3.9 Score=26.86 Aligned_cols=55 Identities=27% Similarity=0.356 Sum_probs=36.0
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEEE
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTVE 67 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~ 67 (162)
...+.+.|.+|+|..+.-+ .+..+| .++|++.+.|.|.+++.-.... ....+.+.
T Consensus 42 ~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 100 (124)
T 2dmb_A 42 KGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVM 100 (124)
T ss_dssp SCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred CCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeEEE
Confidence 3478999999999654322 122345 4568899999999998865543 34454443
No 18
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=81.95 E-value=5.9 Score=26.60 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=34.3
Q ss_pred ceEEEEEECCCCCeEEeccccccc-cEEEEeeccCcEEEEEecCC-CC-CCceEEEE
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESG-NFAFTAAEAGDYTACFWSPE-HN-PPATVTVE 67 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g-~~~f~~~~~G~y~~Cf~n~~-~~-~~~~~~v~ 67 (162)
..+.+.|.+|++..+--.+ ..+| .++|++.++|.|.+.+.-.. .. ....+++.
T Consensus 76 g~l~v~I~gPs~~~~~~~d-~~dGy~V~YtP~~~G~y~I~Vk~~g~~hI~GSPF~v~ 131 (138)
T 2nqc_A 76 GALSVTIDGPSKVQLDCRE-CPEGHVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAK 131 (138)
T ss_dssp CCEEEEEESSSCCEEEEEE-ETTEEEEEEECCSCEEEEEEEEESSSCBCTTCSEEEE
T ss_pred CcEEEEEECCCCCeeeEEE-CCCcEEEEEEcCCCEEEEEEEEECCcccCCCCCeEEE
Confidence 3688999999987543222 2344 55688899999988877554 33 33444443
No 19
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=81.82 E-value=4.4 Score=24.67 Aligned_cols=45 Identities=22% Similarity=0.243 Sum_probs=28.8
Q ss_pred CceEEEEEECCCCCeEEe-ccccccc--cEEEEeeccCcEEEEEecCC
Q 040567 13 THKLTVKVTSPYGNSYHQ-GDHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~-~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
+..+.+.|.+|+|..+.- -.+..+| ..+|++.++|.|.+++.-..
T Consensus 29 ~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 29 NNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGH 76 (89)
T ss_dssp SCCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECC
Confidence 346888888999863221 1222344 45578888888888877553
No 20
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=81.26 E-value=4.4 Score=28.92 Aligned_cols=52 Identities=13% Similarity=0.212 Sum_probs=35.5
Q ss_pred CceEEEEEECCCCCeEE-eccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEE
Q 040567 13 THKLTVKVTSPYGNSYH-QGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVT 65 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~-~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~ 65 (162)
...+.+.|.+|+| .+. .-.+...| ..+|++.+.|.|.+++.-.... ....+.
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~~I~gSPF~ 189 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFK 189 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTEECBTCSEE
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeE
Confidence 4579999999999 332 21233466 5778999999999999876543 333444
No 21
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=80.86 E-value=5.1 Score=24.76 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=28.4
Q ss_pred CceEEEEEECCCCCeEE-eccccccc--cEEEEeeccCcEEEEEecCC
Q 040567 13 THKLTVKVTSPYGNSYH-QGDHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~-~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
...+.+.|.+|+|..+. .-.+..+| ..+|++.+.|.|.+++.-..
T Consensus 36 ~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 83 (96)
T 1v05_A 36 TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGD 83 (96)
T ss_dssp SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 34688888999885321 11122344 45578888888888877543
No 22
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=80.80 E-value=7.8 Score=25.04 Aligned_cols=53 Identities=19% Similarity=0.374 Sum_probs=35.0
Q ss_pred CceEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 13 THKLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
...+.+.|.+|.+..+.- .+..+| .++|++.++|.|.+++.-.... ....+.+
T Consensus 48 ~~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 103 (119)
T 2k9u_A 48 AGGLSIAVEGPSKAEIAF-EDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 103 (119)
T ss_dssp SEEEEEEEESSSCCEEEE-ECCSSSEEEEEEECCSSEEEEEEEEETSCBCSSCSEEE
T ss_pred CCcEEEEEeCCCCCeEEE-EECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEE
Confidence 346888899998843322 223455 5678899999999998865443 3445444
No 23
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=80.66 E-value=6.1 Score=24.35 Aligned_cols=42 Identities=24% Similarity=0.353 Sum_probs=29.0
Q ss_pred eEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCC
Q 040567 15 KLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
.+.+.|.+|.+..+.-. +..+| .++|++.++|.|.+++.-..
T Consensus 35 ~~~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g 78 (94)
T 2w0p_A 35 GLAIAVEGPSKAEISFE-DRKDGSCGVAYVVQEPGDYEVSVKFNE 78 (94)
T ss_dssp CEEEEEEESSCCEEEEE-ECTTSCEEEEEECSSCEEEEEEEEETT
T ss_pred cEEEEEECCCCCeEEEE-ECCCCEEEEEEEECCCceEEEEEEECC
Confidence 57888889988544322 23345 45688888999998887553
No 24
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=79.88 E-value=6.6 Score=29.69 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=36.3
Q ss_pred ceEEEEEECCCCCeEEec-ccccccc--EEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 14 HKLTVKVTSPYGNSYHQG-DHVESGN--FAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
..+.+.|.+|+| .+... .+..+|. .+|++.+.|.|.+++.-.... ....+.+
T Consensus 234 ~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~~I~gsPf~v 289 (311)
T 1wlh_A 234 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQ 289 (311)
T ss_dssp SCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTEECTTCSEEE
T ss_pred CcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECCEECCCCCEEE
Confidence 468999999999 44322 2335565 678999999999999877544 3444443
No 25
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=79.52 E-value=4.2 Score=26.13 Aligned_cols=54 Identities=19% Similarity=0.306 Sum_probs=34.8
Q ss_pred ceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEEE
Q 040567 14 HKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTVE 67 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~ 67 (162)
..+.+.|.+|+|..+.-. .+..+| .++|++.+.|.|.+++.-.... ....+.+.
T Consensus 44 ~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 101 (115)
T 2d7m_A 44 GLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIH 101 (115)
T ss_dssp SCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred CEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEE
Confidence 368889999998653221 222445 4558889999999998866543 33444443
No 26
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=77.39 E-value=8 Score=23.90 Aligned_cols=44 Identities=16% Similarity=0.262 Sum_probs=30.2
Q ss_pred CceEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCC
Q 040567 13 THKLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
...+.+.|.+|.+..+.-. +..+| .++|++.++|.|.+.+.-..
T Consensus 36 ~~~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~g 81 (97)
T 2bp3_A 36 EGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNE 81 (97)
T ss_dssp SEEEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEECC
Confidence 3468888999988544322 22345 56688888999998887553
No 27
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=76.70 E-value=5 Score=26.84 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=31.8
Q ss_pred ceEEEEEECCCCCeEEecc--ccccccEEEEee---------ccCcEEEEEecC
Q 040567 14 HKLTVKVTSPYGNSYHQGD--HVESGNFAFTAA---------EAGDYTACFWSP 56 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~--~~~~g~~~f~~~---------~~G~y~~Cf~n~ 56 (162)
..+.+.|+|.+|+++++.. ..+.|.+.|... .+|.|.+.+.-.
T Consensus 37 ~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 37 SNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred cEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 3799999999999998754 245676666553 257898888655
No 28
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=76.06 E-value=8.4 Score=24.07 Aligned_cols=43 Identities=19% Similarity=0.225 Sum_probs=28.5
Q ss_pred ceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecC
Q 040567 14 HKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSP 56 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~ 56 (162)
..+.+.|.+|+|..+.-. .+..+| .++|++.+.|.|.+.+.-.
T Consensus 39 ~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~ 84 (100)
T 3rgh_A 39 AELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYG 84 (100)
T ss_dssp CCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEET
T ss_pred ceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 368899999998654321 222344 4567888888888877544
No 29
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=75.10 E-value=6.5 Score=25.06 Aligned_cols=47 Identities=17% Similarity=0.199 Sum_probs=33.3
Q ss_pred CCceEEEEEECC-CCCeEEeccccccccEEEEe--eccCcEEEEEecCCC
Q 040567 12 DTHKLTVKVTSP-YGNSYHQGDHVESGNFAFTA--AEAGDYTACFWSPEH 58 (162)
Q Consensus 12 ~~~~i~~~i~~p-~g~~v~~~~~~~~g~~~f~~--~~~G~y~~Cf~n~~~ 58 (162)
+-+.+++.|.+. +|+++|+.....-...++.. +.+|+|.+=+.....
T Consensus 43 ~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~~ 92 (101)
T 3sd2_A 43 AKDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILNDC 92 (101)
T ss_dssp CCSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETTE
T ss_pred CCCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCCc
Confidence 445799999986 89999987644433455544 668899888776543
No 30
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=75.10 E-value=6.4 Score=24.84 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=32.7
Q ss_pred eEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEE
Q 040567 15 KLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVT 65 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~ 65 (162)
.+.+.|.+|.+..+.-.+ ..+| .++|++.++|.|.+++.-.... ....+.
T Consensus 43 ~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~ 95 (105)
T 2dic_A 43 GLGITVEGPSESKINCRD-NKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFR 95 (105)
T ss_dssp CEEEEEESSSCCCCEEEE-CSSSCEEEEECCSSCEEEEEEEEETTEECTTCSEE
T ss_pred ceEEEEECCCCCeEEEEE-CCCCeEEEEEEeCCCeEEEEEEEECCEECCCCCEE
Confidence 688889999885443222 3445 5668888999999998855433 333444
No 31
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=74.52 E-value=5.3 Score=28.11 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=31.8
Q ss_pred ceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCC
Q 040567 14 HKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
..+.+.|.+|+|+...-. .+..+| ..+|++.+.|.|++.+.-..
T Consensus 34 ~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 34 GEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDN 80 (188)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETT
T ss_pred ceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECC
Confidence 368899999999875321 222345 46688899999999988664
No 32
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.88 E-value=11 Score=24.72 Aligned_cols=54 Identities=13% Similarity=0.223 Sum_probs=34.7
Q ss_pred ceEEEEEECCCCCeEEeccccccc-cEEEEeeccCcEEEEEecCC-CC-CCceEEEEE
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESG-NFAFTAAEAGDYTACFWSPE-HN-PPATVTVEF 68 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g-~~~f~~~~~G~y~~Cf~n~~-~~-~~~~~~v~~ 68 (162)
..+.+.|.+|++..+--.+ ..+| .++|++.++|.|.+.+.-.. .. ....+++..
T Consensus 52 ~~l~v~i~gp~~~~~~~~d-~~dGy~V~Y~P~~~G~y~I~V~~~g~~hI~gSPF~v~v 108 (125)
T 2eec_A 52 GTLSVTIEGPSKVKMDCQE-TPEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108 (125)
T ss_dssp CCEEEEEESSSCCCCEEEE-CSSSEEEEECCSSCEEEEEEEEESSSCBCTTCSEEEEE
T ss_pred CcEEEEEECCCCCcceeEE-CCCCEEEEEEcCCCeEEEEEEEECCcccCCCCCeEEEE
Confidence 4688999999886543222 2344 45578899999988887554 33 344544433
No 33
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=73.55 E-value=8.5 Score=27.01 Aligned_cols=43 Identities=16% Similarity=0.268 Sum_probs=30.9
Q ss_pred ceEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCC
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
..+.+.|.+|.+..+.-. +..+| .++|++.++|.|.+|+.-..
T Consensus 128 g~l~v~I~gp~~~~~~~~-d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 128 GGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNE 172 (188)
T ss_dssp SCEEEEEECSSCCEEEEE-ECTTSEEEEEEECCSSEEEEEEEEETT
T ss_pred CCeEEEEeCCCCCeEEEE-ECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 368888899988554322 23456 67788899999999988654
No 34
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=72.03 E-value=8.1 Score=30.05 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=30.4
Q ss_pred eEEEEEECCCCCeEEe---ccccccc--cEEEEeeccCcEEEEEecCC
Q 040567 15 KLTVKVTSPYGNSYHQ---GDHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~---~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
.+.+.|.+|+|..+-- ..+..+| ..+|++.++|.|.+.+.-..
T Consensus 288 ~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 288 DVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAG 335 (347)
T ss_dssp CEEEEEECTTSCEEECEEEESSTTCSEEEEEECCCSSSEEEEEEEETT
T ss_pred ceEEEEECCCCCeecCEEEEEcCCCCEEEEEEEECCCEeEEEEEEECC
Confidence 6899999999976432 2223345 45688899999988876554
No 35
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=71.11 E-value=8.6 Score=26.96 Aligned_cols=51 Identities=18% Similarity=0.418 Sum_probs=32.7
Q ss_pred eEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 15 KLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
.+.+.|.+|.+..+. -.+..+| .++|++.++|.|.+++.-.... ....+.+
T Consensus 129 ~l~v~V~gp~~~~~~-v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v 182 (191)
T 2k7q_A 129 GLSLSIEGPSKVDIN-TEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSV 182 (191)
T ss_dssp EEEEEEEESSCEEEE-EEECTTSCEEEEEEESSCEEEEEEEEETTEECTTCSEEE
T ss_pred ceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEE
Confidence 577888888874432 2223455 5778889999999998865433 3334443
No 36
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=69.48 E-value=12 Score=20.74 Aligned_cols=44 Identities=9% Similarity=0.086 Sum_probs=27.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 040567 87 QVDMMELELKKLFDTVSSIHEEMFYLREREEEMQELNKTTNSRM 130 (162)
Q Consensus 87 ~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 130 (162)
.++.|...+..|..++..+..+...++.--..-.+-+...+.|+
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~Rl 48 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45667777777777777777776666654444444444444443
No 37
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=69.26 E-value=19 Score=22.88 Aligned_cols=53 Identities=17% Similarity=0.342 Sum_probs=34.7
Q ss_pred eEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEEEE
Q 040567 15 KLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTVEF 68 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~~ 68 (162)
.+.+.|.+|.+-.+.- .+..+| .++|++.++|.|.+.+.-.... ....+.+..
T Consensus 43 ~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2di8_A 43 GISLAVEGPSKVDIQT-EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI 98 (111)
T ss_dssp CEEEEEESSSCCCEEC-CBCTTSCEEEEECCCSCSEEEEEEEESSCBCTTCSEEEEE
T ss_pred ceEEEEEcCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEEE
Confidence 5788889998854432 233456 5668889999999988755443 344544433
No 38
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=68.76 E-value=7.6 Score=24.83 Aligned_cols=40 Identities=8% Similarity=0.016 Sum_probs=24.9
Q ss_pred EEEEECCCCCeEEec---cccccccEEEEeeccCcEEEEEecC
Q 040567 17 TVKVTSPYGNSYHQG---DHVESGNFAFTAAEAGDYTACFWSP 56 (162)
Q Consensus 17 ~~~i~~p~g~~v~~~---~~~~~g~~~f~~~~~G~y~~Cf~n~ 56 (162)
.+.|..|.+...... ......+++...+++|.|++=+...
T Consensus 50 ~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~I~V~~~ 92 (111)
T 4g9s_B 50 DTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQT 92 (111)
T ss_dssp EEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEEEEEECC
T ss_pred cEEEECCCCccccccccccccCCceEEEEecCCccEEEEEEec
Confidence 344555655432211 1222456888999999999998755
No 39
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=68.23 E-value=13 Score=23.72 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=34.3
Q ss_pred ceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEEE
Q 040567 14 HKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTVE 67 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~ 67 (162)
..+.+.|.+|+|..+.-. .+..+| .++|++.+.|.|++.+.-.... ....+++.
T Consensus 42 ~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~ 99 (113)
T 2dia_A 42 GALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVK 99 (113)
T ss_dssp CCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred ccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECCEECCCCCEEEE
Confidence 468888889988644322 223445 4568889999999998865433 33344443
No 40
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=68.08 E-value=9.4 Score=26.76 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=33.3
Q ss_pred CCceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCC
Q 040567 12 DTHKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 12 ~~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
+...+.+.|.+|+|+.+--. ....+| ..+|++++.|.|.+-+....
T Consensus 29 ~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 29 DLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp CSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 44579999999999865322 223344 46789999999998887764
No 41
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.99 E-value=12 Score=24.03 Aligned_cols=52 Identities=15% Similarity=0.227 Sum_probs=32.0
Q ss_pred ceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEE
Q 040567 14 HKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVT 65 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~ 65 (162)
..+.+.|.+|+|..+.-. .+..+| .++|++.+.|.|.+++.-.... ....+.
T Consensus 54 ~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPF~ 109 (119)
T 2e9j_A 54 GLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYR 109 (119)
T ss_dssp CCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEESSCBCTTCSEE
T ss_pred CeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEECCEECCCCCEE
Confidence 367888889988643221 122345 4567888899998888755433 333444
No 42
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=66.47 E-value=24 Score=23.07 Aligned_cols=52 Identities=15% Similarity=0.278 Sum_probs=33.9
Q ss_pred ceEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
..+.+.|.+|.+..+.-. +..+| .++|++.++|.|.+.+.-.... ....+.+
T Consensus 62 ~~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 116 (131)
T 2di9_A 62 GGLGLTVEGPCEAKIECS-DNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKA 116 (131)
T ss_dssp SCEEEEECSSSCCEEEEE-ECSSSEEEEEEECSSSSEEEEEEEESSCBCTTCSEEE
T ss_pred CeeEEEEEecCCceEEEE-ECCCCEEEEEEEeCCCeeEEEEEEECCEECCCcCEEE
Confidence 368888899988544222 23345 4668889999999998855433 3444443
No 43
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=65.81 E-value=6.8 Score=25.60 Aligned_cols=54 Identities=17% Similarity=0.193 Sum_probs=34.2
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEE
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTV 66 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v 66 (162)
+..+.+.|.+|+|..+.-. .+..+| ..+|++.+.|.|++++.-.... ....+.+
T Consensus 56 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g~~I~gSPF~v 113 (128)
T 2dib_A 56 GDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKV 113 (128)
T ss_dssp CSCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSSCBCTTCSEEE
T ss_pred CccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECCEECCCCCEEE
Confidence 3468888889988643211 122345 4568889999999999866543 3344443
No 44
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=64.62 E-value=8.7 Score=24.54 Aligned_cols=54 Identities=17% Similarity=0.332 Sum_probs=34.6
Q ss_pred ceEEEEEECCCCCeEEeccccccc--cEEEEeeccCcEEEEEecCCCC-CCceEEEEE
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESG--NFAFTAAEAGDYTACFWSPEHN-PPATVTVEF 68 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~~~v~~ 68 (162)
..+.+.|.+|.+..+. -.+..+| .++|++.++|.|.+.+.-.... ....+.+.+
T Consensus 42 ~~l~v~v~gp~~~~~~-v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2d7o_A 42 GGLSLAVEGPSKAEIT-CKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 98 (111)
T ss_dssp SCBCCEEESSSCCCBC-CCCCSSSEEEEEECCSSCEEEEEECBBSSCBCTTCSEEEEE
T ss_pred CcEEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCcCEEEEE
Confidence 3577788899864332 2233456 4668889999999998855443 344545433
No 45
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=63.22 E-value=6.7 Score=29.44 Aligned_cols=44 Identities=27% Similarity=0.280 Sum_probs=30.8
Q ss_pred CceEEEEEECCCCCeEEecc-ccccc--cEEEEeeccCcEEEEEecC
Q 040567 13 THKLTVKVTSPYGNSYHQGD-HVESG--NFAFTAAEAGDYTACFWSP 56 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~-~~~~g--~~~f~~~~~G~y~~Cf~n~ 56 (162)
...+++.|.+|+|..+.-.- +...| ..+|++.+.|.|++|+.-.
T Consensus 130 ~~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~ 176 (288)
T 2j3s_A 130 IQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYK 176 (288)
T ss_dssp CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEET
T ss_pred cCceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEEC
Confidence 34789999999999765432 22334 4668899999999998755
No 46
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=63.04 E-value=11 Score=24.79 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=31.2
Q ss_pred eEEEEEECCCCCeEEeccccccccEEEEeeccCcEEEEEecC
Q 040567 15 KLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFWSP 56 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~~~~~~g~~~f~~~~~G~y~~Cf~n~ 56 (162)
+..|.|++.+|+.+... .+.|.+.+.--..|.|.+.=.--
T Consensus 44 GA~F~l~~~~g~~v~~~--~sdG~~~~~~L~~G~Y~l~EtkA 83 (121)
T 2x5p_A 44 GATMELRDSSGKTISTW--ISDGQVKDFYLMPGKYTFVETAA 83 (121)
T ss_dssp CCEEEEECTTSCEEEEE--ECCSSCEEEEECSEEEEEEEEEC
T ss_pred CCEEEEEECCCCEEEEE--EeCCEEEEcccCCcEEEEEEEeC
Confidence 68899999999987543 25688888888899998874433
No 47
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=61.84 E-value=28 Score=22.16 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=10.7
Q ss_pred cccchHHHHHHHHHHHHHHH
Q 040567 86 GQVDMMELELKKLFDTVSSI 105 (162)
Q Consensus 86 ~~~~~l~~~l~~l~~~l~~i 105 (162)
+.+..++..+..|.+...++
T Consensus 21 ~eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 21 SEIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34556666665555554444
No 48
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=61.54 E-value=16 Score=19.35 Aligned_cols=28 Identities=14% Similarity=0.020 Sum_probs=17.5
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhH
Q 040567 119 MQELNKTTNSRMASLGFISLVVCLSVAA 146 (162)
Q Consensus 119 ~~~~~es~~~rv~~~si~qi~vli~~~~ 146 (162)
|..+-+.--....|.+++-+++++++++
T Consensus 13 hE~Ty~gFi~~~k~gt~~~~~~ll~mai 40 (43)
T 1qle_D 13 QQATFAGFIKGATWVSILSIAVLVFLAL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555666677777777776654
No 49
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=61.09 E-value=23 Score=29.42 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=32.8
Q ss_pred CCCCceEEEEEECCCCCeEEecccc-ccccEE--EEe---eccCcEEEEEecC
Q 040567 10 LPDTHKLTVKVTSPYGNSYHQGDHV-ESGNFA--FTA---AEAGDYTACFWSP 56 (162)
Q Consensus 10 ~~~~~~i~~~i~~p~g~~v~~~~~~-~~g~~~--f~~---~~~G~y~~Cf~n~ 56 (162)
.|....+.+.|.||+|+.+.+.... ..|-|+ |.. ...|.|++-+...
T Consensus 149 ~p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~ 201 (656)
T 4fxk_A 149 RPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFS 201 (656)
T ss_dssp SBCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEES
T ss_pred CcCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEc
Confidence 4666689999999999998765422 345444 433 3369999998754
No 50
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=61.04 E-value=19 Score=30.25 Aligned_cols=47 Identities=9% Similarity=0.026 Sum_probs=28.6
Q ss_pred CCCCceEEEEEECCCCCeEEeccccccccEEEEee---ccCcEEEEEecC
Q 040567 10 LPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAA---EAGDYTACFWSP 56 (162)
Q Consensus 10 ~~~~~~i~~~i~~p~g~~v~~~~~~~~g~~~f~~~---~~G~y~~Cf~n~ 56 (162)
.|.+..+.+.|.||+|+.+.+..-...-.++|... ..|.|++.+...
T Consensus 133 ~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 133 SKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp -----CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEET
T ss_pred cccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEEC
Confidence 45566899999999999998643222123344442 368999998754
No 51
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=59.97 E-value=31 Score=28.81 Aligned_cols=48 Identities=17% Similarity=0.299 Sum_probs=33.0
Q ss_pred CCCCCceEEEEEECCCCCeEEecccc---ccccE--EEEee---ccCcEEEEEecC
Q 040567 9 PLPDTHKLTVKVTSPYGNSYHQGDHV---ESGNF--AFTAA---EAGDYTACFWSP 56 (162)
Q Consensus 9 ~~~~~~~i~~~i~~p~g~~v~~~~~~---~~g~~--~f~~~---~~G~y~~Cf~n~ 56 (162)
..|....+.+.|.||+|+.+.+..-. ..|.+ +|... ..|.|++-+...
T Consensus 134 ~~p~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 134 LLPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp SCBCCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CcccCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 34555679999999999999874322 34544 34443 469999998764
No 52
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=57.36 E-value=22 Score=19.57 Aligned_cols=29 Identities=3% Similarity=-0.094 Sum_probs=17.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhHH
Q 040567 119 MQELNKTTNSRMASLGFISLVVCLSVAAL 147 (162)
Q Consensus 119 ~~~~~es~~~rv~~~si~qi~vli~~~~~ 147 (162)
|.++-+.--....|.+++-++++++++++
T Consensus 21 he~Ty~gFi~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 21 QEKTFAGFVRMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555556666667767776666653
No 53
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=54.25 E-value=17 Score=27.42 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=31.1
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCC
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
+..+.+.|.+|+|..+.-. .+...| .++|++.+.|.|.+++.-..
T Consensus 142 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 142 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 189 (311)
T ss_dssp CCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECC
Confidence 3468999999998643211 122345 45688899999999988654
No 54
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=51.28 E-value=25 Score=22.36 Aligned_cols=38 Identities=18% Similarity=0.249 Sum_probs=28.5
Q ss_pred EEEEECCCCCeEEeccccccccEEEEeeccCc---EEEEEe
Q 040567 17 TVKVTSPYGNSYHQGDHVESGNFAFTAAEAGD---YTACFW 54 (162)
Q Consensus 17 ~~~i~~p~g~~v~~~~~~~~g~~~f~~~~~G~---y~~Cf~ 54 (162)
.+.|+|..|.++......+.+.-++-+.++|. +++||.
T Consensus 51 ~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Ley~ 91 (106)
T 3fn2_A 51 YVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFL 91 (106)
T ss_dssp EEEEECTTSCBCSCCCSCSTTEEEEEEECSCCTTCCEEEEE
T ss_pred cEEEEcCCCCEEecCCCCcCcceeehhhcCCCccceEEEEE
Confidence 58899999999985444556778888888773 466664
No 55
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=48.82 E-value=35 Score=19.33 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=36.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 040567 86 GQVDMMELELKKLFDTVSSIHEEMFYLREREEEMQELNKTTNSRMA 131 (162)
Q Consensus 86 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 131 (162)
+.++.+...+.+|......|-.|.+..-..-.+....++++..++.
T Consensus 9 ~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l~ 54 (65)
T 1gl2_D 9 AGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888999999999999998888877777777777777766653
No 56
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=48.33 E-value=35 Score=28.06 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=34.9
Q ss_pred CceEEEEEECCCCCeEEecccc--ccccEEEEeeccCcEEEEEecCCCC
Q 040567 13 THKLTVKVTSPYGNSYHQGDHV--ESGNFAFTAAEAGDYTACFWSPEHN 59 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~~~--~~g~~~f~~~~~G~y~~Cf~n~~~~ 59 (162)
..++++.|++|+|+.+...... ...+..+.....|.|.+-+......
T Consensus 458 ~~dldl~l~~p~G~~~~~~~~~~~~~E~v~~~~~~~G~y~i~V~~~~~s 506 (539)
T 3afg_A 458 GSDLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSGS 506 (539)
T ss_dssp TCEEEEEEECTTSCEEEEECCSSBSCEEEEEESCCSEEEEEEEEEEESC
T ss_pred CCCeEEEEECCCCCEeeccccCCCceeEEEECCCCCEEEEEEEEeccCC
Confidence 4689999999999988654322 2234667778899999999876543
No 57
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=48.08 E-value=46 Score=23.40 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=30.5
Q ss_pred CceEEEEEECCCCCeEEec-cccccc--cEEEEeeccCcEEEEEecCC
Q 040567 13 THKLTVKVTSPYGNSYHQG-DHVESG--NFAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 57 (162)
+..+.+.|.+|+|..+.-. .+..+| ..+|++.+.|.|.+.+.-..
T Consensus 43 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 43 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 90 (212)
T ss_dssp CCCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT
T ss_pred CCeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC
Confidence 4468999999998654322 122345 45578888999988887554
No 58
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=44.51 E-value=49 Score=19.76 Aligned_cols=47 Identities=17% Similarity=0.141 Sum_probs=36.3
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 040567 85 KGQVDMMELELKKLFDTVSSIHEEMFYLREREEEMQELNKTTNSRMA 131 (162)
Q Consensus 85 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 131 (162)
.+.++.|...|.+|......|-.|.+..-.--......++++..++.
T Consensus 18 D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~ 64 (82)
T 2nps_D 18 DEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLD 64 (82)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35688999999999999999988888777766666666666666553
No 59
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=42.42 E-value=9.5 Score=17.00 Aligned_cols=11 Identities=36% Similarity=0.661 Sum_probs=7.9
Q ss_pred HHHHHHhhhcc
Q 040567 150 WHLKTFFERKK 160 (162)
Q Consensus 150 ~~lk~fF~~kk 160 (162)
..|.+||+++|
T Consensus 8 ~SLqRFleKRk 18 (21)
T 3ogl_Q 8 ASLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHHhh
Confidence 35778888775
No 60
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=42.13 E-value=51 Score=20.02 Aligned_cols=18 Identities=28% Similarity=0.488 Sum_probs=12.8
Q ss_pred ccccEEEEe---------eccCcEEEE
Q 040567 35 ESGNFAFTA---------AEAGDYTAC 52 (162)
Q Consensus 35 ~~g~~~f~~---------~~~G~y~~C 52 (162)
.+|.++|++ ...|.|-+.
T Consensus 40 ~~G~~s~~~G~Gd~~v~A~k~G~~g~a 66 (82)
T 3e8v_A 40 RSGHASLTAGKGDMLVWASKDGRFGYS 66 (82)
T ss_dssp TTSEEEEECCSEEEEEEEEETTEEEEE
T ss_pred CCceEEEEEcCCceEEEeccCCEEEEE
Confidence 478888888 777766554
No 61
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=41.90 E-value=41 Score=18.08 Aligned_cols=19 Identities=16% Similarity=0.184 Sum_probs=7.6
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 040567 90 MMELELKKLFDTVSSIHEE 108 (162)
Q Consensus 90 ~l~~~l~~l~~~l~~i~~~ 108 (162)
.++..++.|...+..+..+
T Consensus 9 ~Le~~ld~LqTr~ArLlae 27 (46)
T 3swy_A 9 QLGSSLDTLQTRFARLLAE 27 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444433333
No 62
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=40.89 E-value=41 Score=17.79 Aligned_cols=20 Identities=10% Similarity=0.137 Sum_probs=14.5
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 040567 89 DMMELELKKLFDTVSSIHEE 108 (162)
Q Consensus 89 ~~l~~~l~~l~~~l~~i~~~ 108 (162)
+.++.+|..|+.+|..+...
T Consensus 19 e~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 19 EDFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56777777777777777654
No 63
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=38.90 E-value=43 Score=26.43 Aligned_cols=43 Identities=26% Similarity=0.404 Sum_probs=28.1
Q ss_pred ceEEEEEECCCCCeEEecccc-----------ccccEEEEeeccCcEEEEEecC
Q 040567 14 HKLTVKVTSPYGNSYHQGDHV-----------ESGNFAFTAAEAGDYTACFWSP 56 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~-----------~~g~~~f~~~~~G~y~~Cf~n~ 56 (162)
+++++.|++|+|..++-.... ...+..+.....|.|++.+...
T Consensus 366 ndldl~v~~~~g~~~~~n~~~~~~~~~~d~~~n~E~v~~~~~~~G~y~i~V~~~ 419 (434)
T 1wmd_A 366 NDLDLVITAPNGTQYVGNDFTSPYNDNWDGRNNVENVFINAPQSGTYTIEVQAY 419 (434)
T ss_dssp SEEEEEEECTTSCEEETTCCSSSTTSCCCSSCSEEEEEESSCCSEEEEEEEEEE
T ss_pred eccCEEEEeCCCCEEeCCCccccccCCCCCCCceeEEEEcCCCCeEEEEEEEEE
Confidence 489999999999987522111 1123555556678888776654
No 64
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=38.55 E-value=44 Score=31.47 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=33.8
Q ss_pred CCCCCceEEEEEECCCCCeEEecccc-ccccEE---EEe---eccCcEEEEEecCC
Q 040567 9 PLPDTHKLTVKVTSPYGNSYHQGDHV-ESGNFA---FTA---AEAGDYTACFWSPE 57 (162)
Q Consensus 9 ~~~~~~~i~~~i~~p~g~~v~~~~~~-~~g~~~---f~~---~~~G~y~~Cf~n~~ 57 (162)
..|....+.+.|.||+|+.+.+.... ..|.++ |.. ...|.|++-+....
T Consensus 152 ~~p~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 152 LKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp CSCCCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred CcccccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 44555679999999999998765322 345544 333 24699999998653
No 65
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=36.98 E-value=72 Score=19.51 Aligned_cols=31 Identities=6% Similarity=0.092 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 040567 101 TVSSIHEEMFYLREREEEMQELNKTTNSRMA 131 (162)
Q Consensus 101 ~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 131 (162)
.++++.+..+-+......++..+...+++..
T Consensus 34 kL~~L~~kt~~L~~~s~~F~~~A~~l~rkmw 64 (91)
T 3hd7_A 34 KLSELDDRADALQAGASQFETSAAKLKRKYW 64 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555555566666666555543
No 66
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=36.84 E-value=95 Score=20.86 Aligned_cols=41 Identities=20% Similarity=0.360 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 040567 100 DTVSSIHEEMFYLREREEEMQELNKTTNSRMASLGFISLVV 140 (162)
Q Consensus 100 ~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~~~si~qi~v 140 (162)
..|+++-.+|.|+...+.-..++-+....-.-.|.+++-++
T Consensus 90 ~EL~~VceEQqfl~~QedL~~DL~eDL~ka~etf~lVeq~~ 130 (141)
T 3okq_A 90 AELDKVCEEQQFLTLQEELILDLKEDLGKALETFDLIKLCC 130 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44677778999999999999999999888888888776543
No 67
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=36.24 E-value=1.1e+02 Score=28.60 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=31.5
Q ss_pred CCCCCceE-EEEEECCCCCeEEecccc--ccccE--EEEe---eccCcEEEEEecC
Q 040567 9 PLPDTHKL-TVKVTSPYGNSYHQGDHV--ESGNF--AFTA---AEAGDYTACFWSP 56 (162)
Q Consensus 9 ~~~~~~~i-~~~i~~p~g~~v~~~~~~--~~g~~--~f~~---~~~G~y~~Cf~n~ 56 (162)
..|....+ .+.|.||+|+.+.+.... ..|.+ +|.. ...|.|++.....
T Consensus 132 ~~p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 132 FHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp CCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CcCccCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEec
Confidence 35555555 689999999999875432 23433 3433 3468999988765
No 68
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=36.09 E-value=72 Score=19.27 Aligned_cols=46 Identities=9% Similarity=0.124 Sum_probs=36.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 040567 86 GQVDMMELELKKLFDTVSSIHEEMFYLREREEEMQELNKTTNSRMA 131 (162)
Q Consensus 86 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 131 (162)
+.++.|...+.+|......|-.|.+..-..-.+....++++..++.
T Consensus 29 ~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~ 74 (87)
T 1sfc_D 29 ENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4578888888888888888888888887777777777777777664
No 69
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=35.54 E-value=57 Score=20.37 Aligned_cols=13 Identities=8% Similarity=0.018 Sum_probs=5.7
Q ss_pred EEEECCCCCeEEe
Q 040567 18 VKVTSPYGNSYHQ 30 (162)
Q Consensus 18 ~~i~~p~g~~v~~ 30 (162)
+.+++++|.++++
T Consensus 63 LVl~~~~~~~~W~ 75 (110)
T 3a0c_A 63 LVIYDQSNRVIWQ 75 (110)
T ss_dssp EEEECTTCCEEEE
T ss_pred EEEECCCCcEEEe
Confidence 3444444444443
No 70
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=35.41 E-value=1.1e+02 Score=28.01 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=30.0
Q ss_pred ceEEEEEECCCCCeEEecccc--ccccE--EEEee---ccCcEEEEEecC
Q 040567 14 HKLTVKVTSPYGNSYHQGDHV--ESGNF--AFTAA---EAGDYTACFWSP 56 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~--~~g~~--~f~~~---~~G~y~~Cf~n~ 56 (162)
..+.+.|.||+|+.+.+.... ..|.+ +|..+ ..|.|++-+...
T Consensus 135 ~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 135 KSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred ccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 369999999999999876442 34444 34432 468999988754
No 71
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=35.12 E-value=72 Score=30.19 Aligned_cols=47 Identities=9% Similarity=0.026 Sum_probs=30.4
Q ss_pred CCCCceEEEEEECCCCCeEEeccccccccEEEEee---ccCcEEEEEecC
Q 040567 10 LPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAA---EAGDYTACFWSP 56 (162)
Q Consensus 10 ~~~~~~i~~~i~~p~g~~v~~~~~~~~g~~~f~~~---~~G~y~~Cf~n~ 56 (162)
.|.+..+.+.|.||+|+.+.+..-...-..+|..+ ..|.|++...-.
T Consensus 155 ~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 155 SKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp ---CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred cccCceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 45566799999999999998754222223345443 358999988744
No 72
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=34.86 E-value=63 Score=18.26 Aligned_cols=47 Identities=9% Similarity=0.125 Sum_probs=36.7
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 040567 85 KGQVDMMELELKKLFDTVSSIHEEMFYLREREEEMQELNKTTNSRMA 131 (162)
Q Consensus 85 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 131 (162)
.+.++.+...+.+|......|-.|.+..-..-.+....++++..++.
T Consensus 9 D~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l~ 55 (66)
T 1n7s_D 9 DENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 55 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34578888888888888888888888887777777777777776653
No 73
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=34.32 E-value=29 Score=23.34 Aligned_cols=7 Identities=14% Similarity=0.017 Sum_probs=3.2
Q ss_pred EEEEecC
Q 040567 50 TACFWSP 56 (162)
Q Consensus 50 ~~Cf~n~ 56 (162)
++||.-.
T Consensus 124 rl~f~lG 130 (149)
T 1gu3_A 124 QIAFQLG 130 (149)
T ss_dssp EEEEECT
T ss_pred EEEEEcC
Confidence 4555433
No 74
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=33.70 E-value=76 Score=18.84 Aligned_cols=26 Identities=23% Similarity=0.183 Sum_probs=12.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q 040567 88 VDMMELELKKLFDTVSSIHEEMFYLR 113 (162)
Q Consensus 88 ~~~l~~~l~~l~~~l~~i~~~q~~~~ 113 (162)
++.++..|+.|+..+..+..+..-.+
T Consensus 9 v~~LE~sld~LQTrfARLLaEy~ssQ 34 (74)
T 3swf_A 9 VTRMESSVDLLQTRFARILAEYESMQ 34 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555554443333
No 75
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=33.12 E-value=29 Score=23.42 Aligned_cols=41 Identities=7% Similarity=-0.236 Sum_probs=29.3
Q ss_pred EEEEEECCCCCeEEeccccccc--cEEE-EeeccCcEEEEEecC
Q 040567 16 LTVKVTSPYGNSYHQGDHVESG--NFAF-TAAEAGDYTACFWSP 56 (162)
Q Consensus 16 i~~~i~~p~g~~v~~~~~~~~g--~~~f-~~~~~G~y~~Cf~n~ 56 (162)
--+.|+|.+|++++.+++.|+= ...- ..+..|-|++-.+..
T Consensus 42 tLvlIYDe~G~lLW~qr~vP~le~~I~~eWLkk~gf~Eidtd~~ 85 (148)
T 3bqa_A 42 TMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVN 85 (148)
T ss_dssp CEEEEECTTSCEEEESSCCHHHHHHSCGGGSSSCEEEEEEEEHH
T ss_pred eEEEEEcCCCcEEEecCcchHHHhhcCHHHhcCCCcEEEecCcc
Confidence 3478999999999999988742 2221 235678888877665
No 76
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=32.30 E-value=68 Score=17.82 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=12.8
Q ss_pred HHHHhHHHHHHHHHHhhhcc
Q 040567 141 CLSVAALQIWHLKTFFERKK 160 (162)
Q Consensus 141 li~~~~~Qv~~lk~fF~~kk 160 (162)
+++.-+.-+.+--.||++++
T Consensus 24 llL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 24 LLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp HHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCcccCCC
Confidence 34444455566668999886
No 77
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=32.11 E-value=68 Score=17.81 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=12.2
Q ss_pred HHHHhHHHHHHHHHHhhhcc
Q 040567 141 CLSVAALQIWHLKTFFERKK 160 (162)
Q Consensus 141 li~~~~~Qv~~lk~fF~~kk 160 (162)
++++-+.-+.+--.||++++
T Consensus 21 LLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 21 LLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp HHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHcCcccCCC
Confidence 33444445555668998876
No 78
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=32.01 E-value=1.1e+02 Score=22.71 Aligned_cols=43 Identities=23% Similarity=0.365 Sum_probs=27.9
Q ss_pred ceEEEEEECCCCCeEEecccccccc--EEEEeeccCcEEEEEecCC
Q 040567 14 HKLTVKVTSPYGNSYHQGDHVESGN--FAFTAAEAGDYTACFWSPE 57 (162)
Q Consensus 14 ~~i~~~i~~p~g~~v~~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 57 (162)
..+.+.|.+|.+..+.- .+..+|. ++|++.++|.|.+++.-..
T Consensus 228 g~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 228 GGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFNE 272 (288)
T ss_dssp EEEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred CceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence 36778888887643322 2234453 5688888899988887543
No 79
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=31.37 E-value=1.1e+02 Score=20.10 Aligned_cols=45 Identities=9% Similarity=0.205 Sum_probs=34.5
Q ss_pred eEEEEEECCCCCeEEeccc------------------cccccEEEEeeccCcEEEEEecCCCC
Q 040567 15 KLTVKVTSPYGNSYHQGDH------------------VESGNFAFTAAEAGDYTACFWSPEHN 59 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~~~------------------~~~g~~~f~~~~~G~y~~Cf~n~~~~ 59 (162)
...+.++.++|+++.+.+. .....|.......|+|.+-+......
T Consensus 30 ~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lka~Ngq 92 (130)
T 2k8e_A 30 QFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAANHQ 92 (130)
T ss_dssp CEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEECTTSC
T ss_pred CEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEEeCCCC
Confidence 6899999999999976542 12457888888889999888876543
No 80
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=31.12 E-value=54 Score=16.30 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040567 95 LKKLFDTVSSIHEEMFYLREREEEMQ 120 (162)
Q Consensus 95 l~~l~~~l~~i~~~q~~~~~re~~~~ 120 (162)
+++|++++.++..+-.-+...-.|.+
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk 28 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLK 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 44555555555554444443333333
No 81
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=30.90 E-value=1.7e+02 Score=22.12 Aligned_cols=58 Identities=10% Similarity=0.030 Sum_probs=34.0
Q ss_pred CceEEEEEECCCCCeEEeccc-----cccccEEEEeeccCcEEEEEecCCCC---CCceEEEEEEe
Q 040567 13 THKLTVKVTSPYGNSYHQGDH-----VESGNFAFTAAEAGDYTACFWSPEHN---PPATVTVEFEW 70 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~~-----~~~g~~~f~~~~~G~y~~Cf~n~~~~---~~~~~~v~~~~ 70 (162)
.+..-+.|.|++++.++.-+. ...-...|+++.+|.|.+++.-.+.. -.....+.|++
T Consensus 264 ~e~wwi~v~d~~~~~ll~~~r~~l~~~~~~~l~f~~P~~g~~~~~v~~vSD~ylG~D~~~~i~~~v 329 (339)
T 2q0z_X 264 EEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDV 329 (339)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECCSSEEEEEEEEECCSSEEEEEEEEEEESSCSSCCEEEEEEEEE
T ss_pred CCcEEEEEEECCCCEEEEEEEEecccceEEEEEEECCCCCCeeEEEEEEcccccCcceEEEEEEEE
Confidence 357788888987766543211 22346788888888666555544332 23344555554
No 82
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=29.79 E-value=96 Score=18.78 Aligned_cols=45 Identities=11% Similarity=0.175 Sum_probs=35.4
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 040567 86 GQVDMMELELKKLFDTVSSIHEEMFYLREREEEMQELNKTTNSRM 130 (162)
Q Consensus 86 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 130 (162)
+.++.|...+.+|......|-.|.+-.-..-.+....++++..++
T Consensus 30 ~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl 74 (87)
T 1l4a_D 30 NNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRI 74 (87)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457778888888888888888888887777777777777777765
No 83
>3ogk_Q JAZ1 incomplete degron peptide; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana}
Probab=29.75 E-value=17 Score=16.40 Aligned_cols=10 Identities=40% Similarity=0.846 Sum_probs=7.4
Q ss_pred HHHHHhhhcc
Q 040567 151 HLKTFFERKK 160 (162)
Q Consensus 151 ~lk~fF~~kk 160 (162)
.|.+|++++|
T Consensus 4 SLqRFleKRk 13 (22)
T 3ogk_Q 4 SLHRFLEKRK 13 (26)
T ss_pred hHHHHHHHHH
Confidence 4778888775
No 84
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=28.87 E-value=80 Score=29.76 Aligned_cols=48 Identities=13% Similarity=0.261 Sum_probs=32.8
Q ss_pred CCCCCceEEEEEECCCCCeEEecccc---cccc--EEEEee---ccCcEEEEEecC
Q 040567 9 PLPDTHKLTVKVTSPYGNSYHQGDHV---ESGN--FAFTAA---EAGDYTACFWSP 56 (162)
Q Consensus 9 ~~~~~~~i~~~i~~p~g~~v~~~~~~---~~g~--~~f~~~---~~G~y~~Cf~n~ 56 (162)
..|....+.+.|.||+|+.+.+..-. ..|. ++|..+ ..|.|++-+...
T Consensus 155 ~~p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 155 LLPVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp SCCCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CcccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 34555679999999999999874332 3454 344443 369999988743
No 85
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=28.58 E-value=47 Score=25.68 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=29.6
Q ss_pred eEEEEEECCCCCeEE------eccccccccEEEEeeccCcEEEEEe
Q 040567 15 KLTVKVTSPYGNSYH------QGDHVESGNFAFTAAEAGDYTACFW 54 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~------~~~~~~~g~~~f~~~~~G~y~~Cf~ 54 (162)
+..|.|++++|+.+. ...-...|.+.|.--..|.|.+-=.
T Consensus 268 GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 268 GAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp CCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred CCEEEEEeCCCCEEEeccceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 688999999998775 2222357899998888899887643
No 86
>2lme_A Adhesin YADA; trimeric autotransporter, membrane protein, cell adhesion; NMR {Yersinia enterocolitica subsp}
Probab=27.85 E-value=67 Score=20.23 Aligned_cols=26 Identities=8% Similarity=0.184 Sum_probs=19.9
Q ss_pred hccccchHHHHHHHHHHHHHHHHHHH
Q 040567 84 KKGQVDMMELELKKLFDTVSSIHEEM 109 (162)
Q Consensus 84 ~~~~~~~l~~~l~~l~~~l~~i~~~q 109 (162)
...+++....++++|...++++.++.
T Consensus 7 ~~~q~~~~~~~~~~l~~~i~~~~~~~ 32 (105)
T 2lme_A 7 SHPQFEKGAHKFRQLDNRLDKLDTRV 32 (105)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888888888888888886664
No 87
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=26.95 E-value=1.2e+02 Score=19.24 Aligned_cols=13 Identities=15% Similarity=0.036 Sum_probs=5.6
Q ss_pred EEEECCCCCeEEe
Q 040567 18 VKVTSPYGNSYHQ 30 (162)
Q Consensus 18 ~~i~~p~g~~v~~ 30 (162)
+.++|++|.++++
T Consensus 73 LVl~d~~~~~lW~ 85 (119)
T 1b2p_A 73 LVVITNENVTVWQ 85 (119)
T ss_dssp EEEECTTCCEEEE
T ss_pred EEEEeCCCcEEEc
Confidence 3444444444443
No 88
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=26.52 E-value=43 Score=17.57 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=11.3
Q ss_pred HHHhHHHHHHHHHHhhhcc
Q 040567 142 LSVAALQIWHLKTFFERKK 160 (162)
Q Consensus 142 i~~~~~Qv~~lk~fF~~kk 160 (162)
++.-+.-+.+--.||++++
T Consensus 23 lL~li~~~LwK~GFFkR~~ 41 (42)
T 2k1a_A 23 LLTILVLAMWKVGFFKRNR 41 (42)
T ss_dssp HHHHHHHHHHHTTTTCCCC
T ss_pred HHHHHHHHHHHcCcccCCC
Confidence 3333444555557898875
No 89
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=25.97 E-value=1e+02 Score=17.95 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=21.4
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040567 85 KGQVDMMELELKKLFDTVSSIHEEMFYLREREEEM 119 (162)
Q Consensus 85 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~ 119 (162)
..++..|+..+..|......+..+-..++..-...
T Consensus 28 ~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L 62 (70)
T 1gd2_E 28 EDHLKALETQVVTLKELHSSTTLENDQLRQKVRQL 62 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777766666655555555443333
No 90
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=25.82 E-value=1.1e+02 Score=18.14 Aligned_cols=33 Identities=18% Similarity=0.384 Sum_probs=27.2
Q ss_pred hhhccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 040567 82 VAKKGQVDMMELELKKLFDTVSSIHEEMFYLRE 114 (162)
Q Consensus 82 ~a~~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~ 114 (162)
+|-.+.++-|..+|..|.+....+..+-.++|.
T Consensus 11 ~AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 11 YAVREEVEILKEQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp GTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677889999999999999999888777765
No 91
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=25.27 E-value=74 Score=16.00 Aligned_cols=20 Identities=5% Similarity=0.215 Sum_probs=8.3
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 040567 89 DMMELELKKLFDTVSSIHEE 108 (162)
Q Consensus 89 ~~l~~~l~~l~~~l~~i~~~ 108 (162)
+.++..++.|...-.++.++
T Consensus 4 nQLE~KVEeLl~~~~~Le~e 23 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNK 23 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHH
Confidence 34444444444444444333
No 92
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=25.05 E-value=72 Score=15.80 Aligned_cols=19 Identities=11% Similarity=0.219 Sum_probs=7.5
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 040567 89 DMMELELKKLFDTVSSIHE 107 (162)
Q Consensus 89 ~~l~~~l~~l~~~l~~i~~ 107 (162)
+.+++.++.|...-.++.+
T Consensus 4 nQLEdKVEeLl~~~~~Le~ 22 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXEN 22 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHH
Confidence 3344444444333333333
No 93
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=24.86 E-value=1.1e+02 Score=19.08 Aligned_cols=10 Identities=20% Similarity=0.448 Sum_probs=4.5
Q ss_pred cCcEEEEEec
Q 040567 46 AGDYTACFWS 55 (162)
Q Consensus 46 ~G~y~~Cf~n 55 (162)
.|.|.+.+++
T Consensus 82 ~g~~~l~l~~ 91 (115)
T 2dpf_A 82 NGKYALVLQK 91 (115)
T ss_dssp SSCCEEEECT
T ss_pred CCCEEEEEeC
Confidence 3444444443
No 94
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=24.37 E-value=1.1e+02 Score=17.48 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhH
Q 040567 90 MMELELKKLFDTVSSIHEEMFYLR---EREEEMQELNKTTNSRM 130 (162)
Q Consensus 90 ~l~~~l~~l~~~l~~i~~~q~~~~---~re~~~~~~~es~~~rv 130 (162)
.+.+.+..|.+.++++..+..+++ +.+.+-+...|.+-.++
T Consensus 4 SLVDtVYalkDev~eLk~e~k~~k~~le~eqraRk~LE~~vrk~ 47 (61)
T 3l4f_A 4 SLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKV 47 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778888888888777664 45556666666655554
No 95
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=23.84 E-value=61 Score=27.96 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=20.8
Q ss_pred CCCCCCCCCceEEEEEECCCCCeEEeccccccccEEEEeeccCc
Q 040567 5 NEGYPLPDTHKLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGD 48 (162)
Q Consensus 5 ~~~~~~~~~~~i~~~i~~p~g~~v~~~~~~~~g~~~f~~~~~G~ 48 (162)
|++|-.|....-...|.+|+|++...-....+|.-.|...-.|.
T Consensus 10 ~~~~~~~~~~~~~~~v~SPDG~l~v~v~~~~~G~~~YsV~~~gk 53 (738)
T 2d73_A 10 HSSGLVPRGSHMQQKLTSPDNNLVMTFQVDSKGAPTYELTYKNK 53 (738)
T ss_dssp ------------CEEEECTTSCEEEEEEECTTCCEEEEEEETTE
T ss_pred ccccceeecccccceEECCCCCEEEEEEECCCCcEEEEEEECCE
Confidence 45666776666667889999998665443333666666655553
No 96
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=23.49 E-value=72 Score=15.25 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHH
Q 040567 91 MELELKKLFDTVSSI 105 (162)
Q Consensus 91 l~~~l~~l~~~l~~i 105 (162)
+++.+.+|...++++
T Consensus 4 lee~~r~l~~ivq~l 18 (32)
T 2akf_A 4 LEEDVRNLNAIVQKL 18 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444454444444444
No 97
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=23.07 E-value=83 Score=23.94 Aligned_cols=44 Identities=11% Similarity=0.081 Sum_probs=27.4
Q ss_pred CceEEEEEECCCCCeEEeccccc---cccEEEEee---ccCcEEEEEecC
Q 040567 13 THKLTVKVTSPYGNSYHQGDHVE---SGNFAFTAA---EAGDYTACFWSP 56 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~~~~---~g~~~f~~~---~~G~y~~Cf~n~ 56 (162)
-..|++.|.|.+|+.+.+..... .+.+..... .+|.|++-....
T Consensus 35 V~~v~lyvFD~~G~~v~~~~~~~~~L~~~~~m~l~~~l~~G~Y~~VaWgg 84 (314)
T 3pay_A 35 VKSVDVLVFDSDDKLLFTKSVKVAALVGGNRMSLTDELDFGSYKVLTVGS 84 (314)
T ss_dssp CCEEEEEEECTTSBEEEEEEEEGGGSBTTTEEECTTTCCSEEEEEEEEES
T ss_pred cCEEEEEEEcCCCCEEEEEecchhhccCCceEecCCcCCCCcEEEEEEeC
Confidence 34899999999999987654321 112244443 368886644443
No 98
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=22.60 E-value=51 Score=14.81 Aligned_cols=13 Identities=8% Similarity=-0.015 Sum_probs=10.1
Q ss_pred EEEECCCCCeEEe
Q 040567 18 VKVTSPYGNSYHQ 30 (162)
Q Consensus 18 ~~i~~p~g~~v~~ 30 (162)
-.|+|.+|+.+..
T Consensus 7 s~IYD~~g~~i~~ 19 (26)
T 2v2f_A 7 SKIYDNKNQLIAD 19 (26)
T ss_pred CEEEeCCCCEeee
Confidence 4788888888764
No 99
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=22.12 E-value=2.3e+02 Score=20.64 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=17.3
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHH
Q 040567 87 QVDMMELELKKLFDTVSSIHEEMFY 111 (162)
Q Consensus 87 ~~~~l~~~l~~l~~~l~~i~~~q~~ 111 (162)
.++.+++.+..|++.+.+|.+...-
T Consensus 7 Rvd~~EErIs~le~rleei~q~eq~ 31 (233)
T 2yko_A 7 RCDQLEERVSAAEDEINEIKREGKF 31 (233)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788888888888877654433
No 100
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=21.89 E-value=1.5e+02 Score=18.41 Aligned_cols=39 Identities=10% Similarity=0.219 Sum_probs=24.2
Q ss_pred eEEEEEECCCCCeEEeccccccccEEEEeeccCcEEEEEe
Q 040567 15 KLTVKVTSPYGNSYHQGDHVESGNFAFTAAEAGDYTACFW 54 (162)
Q Consensus 15 ~i~~~i~~p~g~~v~~~~~~~~g~~~f~~~~~G~y~~Cf~ 54 (162)
++.+ ..+|+|+......+.....+.+....+|.|.+|+-
T Consensus 76 ~i~i-~~~~~G~P~l~~~~~~~~~~~~SiSH~~~~a~A~v 114 (121)
T 1f7l_A 76 DIEI-RKDQNGKPYIICTKLSPAAVHVSITHTKEYAAAQV 114 (121)
T ss_dssp GCEE-EECTTSCEEEEETTTEEEEEEEEEEECSSEEEEEE
T ss_pred EEEE-EECCCCCcEEEECccccCcEEEEEeCCCCcEEEEE
Confidence 4443 35788887665433222456677777888887763
No 101
>3plu_A Ubiquitin-like modifier HUB1; ubiquitin-like, HUB-1, SNU66, peptide binding protein; 1.40A {Saccharomyces cerevisiae} PDB: 3plv_A 1m94_A 1p0r_A
Probab=21.85 E-value=69 Score=19.87 Aligned_cols=25 Identities=16% Similarity=0.226 Sum_probs=13.1
Q ss_pred CCCCCCCCCc-eEEEEEECCCCCeEE
Q 040567 5 NEGYPLPDTH-KLTVKVTSPYGNSYH 29 (162)
Q Consensus 5 ~~~~~~~~~~-~i~~~i~~p~g~~v~ 29 (162)
+++|-.|... .+.+.|+++.|+.+.
T Consensus 10 ~~~~~~~~~~~mIqI~Vk~~~Gkk~~ 35 (93)
T 3plu_A 10 HSSGLVPRGSHMIEVVVNDRLGKKVR 35 (93)
T ss_dssp ----------CEEEEEEECTTSCEEE
T ss_pred ccccccCCCCceEEEEEECCCCCEEE
Confidence 3455555544 899999999998763
No 102
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=21.31 E-value=88 Score=15.41 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHH
Q 040567 96 KKLFDTVSSIHEE 108 (162)
Q Consensus 96 ~~l~~~l~~i~~~ 108 (162)
++|++++.++..+
T Consensus 3 nQLEdKvEeLl~~ 15 (33)
T 3c3g_A 3 KXIEXKLXEIXSK 15 (33)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 4444444444443
No 103
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.13 E-value=91 Score=23.40 Aligned_cols=44 Identities=18% Similarity=0.367 Sum_probs=27.6
Q ss_pred CceEEEEEECCCCCeEEecccc----ccccEEEEe-eccCcEEEEEecC
Q 040567 13 THKLTVKVTSPYGNSYHQGDHV----ESGNFAFTA-AEAGDYTACFWSP 56 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~~~----~~g~~~f~~-~~~G~y~~Cf~n~ 56 (162)
-..+++.|.|.+|+.+.+.... ..+.+.... -.+|.|++-....
T Consensus 36 V~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaWgg 84 (296)
T 3gf8_A 36 VDKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWAG 84 (296)
T ss_dssp CCEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEEES
T ss_pred cCEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEEEC
Confidence 3489999999999998765332 134333332 2358887654443
No 104
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=20.81 E-value=1.1e+02 Score=16.57 Aligned_cols=38 Identities=16% Similarity=0.259 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 040567 91 MELELKKLFDTVSSIHEEMFYLREREEEMQELNKTTNS 128 (162)
Q Consensus 91 l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~ 128 (162)
.+..+.+|+..++.+.++..-.+.+.......++.+..
T Consensus 10 AERsV~KLek~ID~LEdeL~~eKek~~~i~~eLD~tl~ 47 (52)
T 2z5i_A 10 LENEVARLKKLVDDLEDELYAQKLKYKAISEELDHALN 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 45566666666666666666666666666666665543
No 105
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=20.58 E-value=1.8e+02 Score=18.71 Aligned_cols=46 Identities=15% Similarity=0.058 Sum_probs=29.0
Q ss_pred CceEEEEEECCCCCeEEecccc-ccccEEEEeeccCcEEEEEecCCC
Q 040567 13 THKLTVKVTSPYGNSYHQGDHV-ESGNFAFTAAEAGDYTACFWSPEH 58 (162)
Q Consensus 13 ~~~i~~~i~~p~g~~v~~~~~~-~~g~~~f~~~~~G~y~~Cf~n~~~ 58 (162)
..+++..+++.+++.+...... ..-.-+|.+.++|.|-+.+.....
T Consensus 60 ~~~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~Vy~y~~ 106 (121)
T 3jqw_A 60 YGGATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHLYMFNG 106 (121)
T ss_dssp SSEEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEEEEEEC
T ss_pred CCcEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEEEEecC
Confidence 3467777887777766554311 111234566689999999987543
No 106
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=20.39 E-value=1.2e+02 Score=17.09 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=16.0
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHH
Q 040567 85 KGQVDMMELELKKLFDTVSSIHEEMFYL 112 (162)
Q Consensus 85 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~ 112 (162)
.++++.|+..+..|...-..+..+...+
T Consensus 29 ~~~~~~Le~~v~~L~~eN~~L~~ev~~L 56 (63)
T 2dgc_A 29 LQRMKQLEDKVEELLSKNYHLENEVARL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667766666665555555444333
Done!