Query         040569
Match_columns 385
No_of_seqs    333 out of 2482
Neff          8.3 
Searched_HMMs 29240
Date          Mon Mar 25 15:31:11 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040569hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.1E-65 3.6E-70  490.2  22.7  255    2-265    33-300 (311)
  2 3fpq_A Serine/threonine-protei 100.0 1.7E-64   6E-69  478.5  24.7  252    4-261    29-288 (290)
  3 4fih_A Serine/threonine-protei 100.0 1.7E-64 5.9E-69  488.6  24.6  252    2-262    75-330 (346)
  4 3hyh_A Carbon catabolite-derep 100.0 5.9E-64   2E-68  471.3  22.6  248    2-261    14-268 (275)
  5 4b9d_A Serine/threonine-protei 100.0 1.5E-64 5.1E-69  489.7  19.1  252    2-262    25-283 (350)
  6 4fie_A Serine/threonine-protei 100.0 3.2E-63 1.1E-67  491.1  27.0  252    2-262   152-407 (423)
  7 3ubd_A Ribosomal protein S6 ki 100.0 6.5E-64 2.2E-68  477.2  17.8  254    2-265    25-291 (304)
  8 4g3f_A NF-kappa-beta-inducing  100.0 3.9E-63 1.3E-67  477.6  19.1  244    3-254    60-308 (336)
  9 4g31_A Eukaryotic translation  100.0 3.4E-61 1.1E-65  458.7  17.7  256    2-263     6-287 (299)
 10 4b99_A Mitogen-activated prote 100.0 4.5E-59 1.5E-63  460.5  25.8  257    2-262    55-351 (398)
 11 3omv_A RAF proto-oncogene seri 100.0 2.2E-58 7.6E-63  439.9  23.6  245    2-256    37-294 (307)
 12 4f9c_A Cell division cycle 7-r 100.0 5.8E-58   2E-62  447.4  26.4  253    2-262    22-359 (361)
 13 3v5w_A G-protein coupled recep 100.0 2.1E-58 7.2E-63  476.9  23.8  253    2-265   190-459 (689)
 14 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-58 3.6E-63  441.2  19.8  250    2-261    14-286 (299)
 15 4aoj_A High affinity nerve gro 100.0 8.6E-58   3E-62  440.6  23.8  247    2-256    42-313 (329)
 16 4gt4_A Tyrosine-protein kinase 100.0 2.1E-57 7.1E-62  434.1  22.2  247    2-256    27-300 (308)
 17 3uto_A Twitchin; kinase, muscl 100.0 2.3E-57 7.9E-62  468.1  23.9  255    2-263   158-418 (573)
 18 4ase_A Vascular endothelial gr 100.0 1.2E-56 4.1E-61  436.3  19.4  249    2-256    65-341 (353)
 19 3hmm_A TGF-beta receptor type- 100.0 1.5E-54   5E-59  413.9  21.1  250    2-256     4-291 (303)
 20 1o6l_A RAC-beta serine/threoni 100.0 1.7E-53 5.8E-58  412.3  27.1  254    2-265     6-270 (337)
 21 3fe3_A MAP/microtubule affinit 100.0 3.8E-53 1.3E-57  408.3  25.0  250    2-262    16-271 (328)
 22 3fxz_A Serine/threonine-protei 100.0 6.9E-53 2.4E-57  400.3  26.0  253    2-262    21-276 (297)
 23 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.9E-53 6.5E-58  414.6  21.8  254    2-265    24-290 (353)
 24 3zgw_A Maternal embryonic leuc 100.0 1.8E-53 6.3E-58  413.7  21.6  252    2-262    11-267 (347)
 25 2yab_A Death-associated protei 100.0 8.1E-53 2.8E-57  411.3  25.1  255    2-263    13-280 (361)
 26 4dc2_A Protein kinase C IOTA t 100.0 6.8E-53 2.3E-57  416.5  23.8  255    2-265    53-328 (396)
 27 1fot_A TPK1 delta, CAMP-depend 100.0 2.5E-52 8.5E-57  400.9  26.4  251    2-265     7-268 (318)
 28 1xjd_A Protein kinase C, theta 100.0 7.9E-53 2.7E-57  409.0  22.0  254    2-265    18-279 (345)
 29 3v8s_A RHO-associated protein  100.0 8.6E-53 2.9E-57  417.7  22.0  256    2-265    70-339 (410)
 30 4aw2_A Serine/threonine-protei 100.0   1E-52 3.6E-57  420.3  22.6  257    2-265    75-348 (437)
 31 4fr4_A YANK1, serine/threonine 100.0 4.3E-52 1.5E-56  409.3  26.5  253    2-264    16-280 (384)
 32 3a8x_A Protein kinase C IOTA t 100.0 3.4E-52 1.2E-56  404.4  25.3  254    2-264    10-284 (345)
 33 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.1E-52 1.7E-56  404.0  26.0  250    2-264    42-302 (350)
 34 3tki_A Serine/threonine-protei 100.0   2E-52 6.7E-57  402.1  21.9  255    2-262     8-268 (323)
 35 2i0e_A Protein kinase C-beta I 100.0 5.8E-52   2E-56  404.1  23.9  254    2-265    21-286 (353)
 36 2y0a_A Death-associated protei 100.0 1.4E-51 4.7E-56  396.6  25.1  254    2-262    12-278 (326)
 37 3o0g_A Cell division protein k 100.0   2E-51 6.7E-56  388.3  25.2  253    2-262     3-289 (292)
 38 1tki_A Titin; serine kinase, m 100.0 5.1E-52 1.8E-56  399.0  21.2  254    2-262     6-264 (321)
 39 3soa_A Calcium/calmodulin-depe 100.0 2.3E-51 7.8E-56  411.5  26.6  255    2-262    12-274 (444)
 40 3uc3_A Serine/threonine-protei 100.0 1.1E-51 3.9E-56  402.9  23.7  255    2-262    21-281 (361)
 41 2vd5_A DMPK protein; serine/th 100.0 5.9E-52   2E-56  411.9  22.1  256    2-265    62-337 (412)
 42 3a62_A Ribosomal protein S6 ki 100.0 1.7E-51 5.9E-56  396.0  24.4  253    2-264    18-285 (327)
 43 2bdw_A Hypothetical protein K1 100.0 2.2E-51 7.5E-56  401.2  24.7  254    2-262    30-291 (362)
 44 3c0i_A Peripheral plasma membr 100.0 1.5E-51 5.2E-56  400.3  22.9  254    2-262    25-293 (351)
 45 4ejn_A RAC-alpha serine/threon 100.0 7.7E-52 2.6E-56  414.9  21.4  254    2-265   149-414 (446)
 46 2zv2_A Calcium/calmodulin-depe 100.0 2.1E-51 7.2E-56  389.2  21.7  252    2-260    14-297 (298)
 47 1kob_A Twitchin; kinase, intra 100.0 5.9E-51   2E-55  401.7  24.2  254    2-262    52-311 (387)
 48 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-51 7.7E-56  397.3  20.7  249    2-262    10-265 (336)
 49 3gni_B Strad alpha; kinase fol 100.0 1.2E-50   4E-55  398.8  25.7  256    2-263    26-341 (389)
 50 2w4o_A Calcium/calmodulin-depe 100.0 7.9E-51 2.7E-55  395.1  23.6  255    2-262    54-312 (349)
 51 3g33_A Cell division protein k 100.0 1.3E-50 4.6E-55  385.4  24.6  255    2-262    10-303 (308)
 52 2r5t_A Serine/threonine-protei 100.0 3.4E-51 1.2E-55  401.5  21.1  254    2-265    39-303 (373)
 53 3niz_A Rhodanese family protei 100.0 9.5E-51 3.3E-55  388.0  23.1  253    2-263    22-308 (311)
 54 2c30_A Serine/threonine-protei 100.0 3.3E-50 1.1E-54  386.1  26.8  251    3-262    47-301 (321)
 55 1ob3_A PFPK5, cell division co 100.0 1.4E-50 4.8E-55  381.9  23.4  251    2-262     3-287 (288)
 56 2qr7_A Ribosomal protein S6 ki 100.0 5.7E-51 1.9E-55  395.3  21.2  254    2-261    23-283 (342)
 57 1t4h_A Serine/threonine-protei 100.0 2.2E-50 7.6E-55  380.4  24.4  253    3-261    28-288 (290)
 58 3kn6_A Ribosomal protein S6 ki 100.0 2.8E-51 9.5E-56  394.4  18.5  252    6-262    16-277 (325)
 59 2eue_A Carbon catabolite derep 100.0 1.3E-50 4.5E-55  379.1  21.6  249    2-262    14-269 (275)
 60 2y94_A 5'-AMP-activated protei 100.0 3.9E-50 1.3E-54  405.7  26.2  250    2-262    17-273 (476)
 61 2a2a_A Death-associated protei 100.0   4E-50 1.4E-54  384.8  25.0  254    2-262    13-279 (321)
 62 1nxk_A MAP kinase-activated pr 100.0 2.8E-50 9.7E-55  398.4  24.5  256    2-262    62-328 (400)
 63 3kk8_A Calcium/calmodulin depe 100.0   8E-50 2.7E-54  374.9  26.2  255    2-263     7-269 (284)
 64 3fdn_A Serine/threonine-protei 100.0 2.3E-50 7.7E-55  378.3  21.8  249    2-262    10-264 (279)
 65 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-50 6.3E-55  386.9  21.7  253    2-263     6-301 (317)
 66 3oz6_A Mitogen-activated prote 100.0 2.4E-50 8.1E-55  396.6  23.0  254    2-262    10-335 (388)
 67 3is5_A Calcium-dependent prote 100.0 7.3E-50 2.5E-54  376.7  24.6  252    2-261    23-284 (285)
 68 3rp9_A Mitogen-activated prote 100.0 5.2E-50 1.8E-54  402.7  24.9  260    2-264    54-405 (458)
 69 3qd2_B Eukaryotic translation  100.0 8.2E-51 2.8E-55  389.1  18.1  254    2-261     7-331 (332)
 70 2acx_A G protein-coupled recep 100.0   4E-50 1.4E-54  412.5  24.4  254    2-265   185-454 (576)
 71 3pfq_A PKC-B, PKC-beta, protei 100.0 6.8E-50 2.3E-54  420.1  26.5  254    2-265   342-607 (674)
 72 3hko_A Calcium/calmodulin-depe 100.0 2.5E-50 8.7E-55  389.0  21.4  257    2-263    27-338 (345)
 73 4agu_A Cyclin-dependent kinase 100.0 4.7E-50 1.6E-54  381.6  22.8  254    2-263     4-292 (311)
 74 3gbz_A Kinase, CMGC CDK; ssgci 100.0   2E-50 6.7E-55  388.6  20.1  256    2-264    35-327 (329)
 75 2vgo_A Serine/threonine-protei 100.0   1E-49 3.5E-54  374.7  24.3  250    2-263    15-270 (284)
 76 2yex_A Serine/threonine-protei 100.0 3.5E-50 1.2E-54  375.5  20.6  255    2-262     8-268 (276)
 77 3nsz_A CK II alpha, casein kin 100.0 1.6E-49 5.6E-54  381.0  25.8  253    2-262    37-326 (330)
 78 3mtl_A Cell division protein k 100.0   4E-50 1.4E-54  385.7  21.2  255    2-265     3-291 (324)
 79 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-49 3.8E-54  372.9  23.6  251    2-262    10-268 (277)
 80 2x4f_A Myosin light chain kina 100.0   2E-50 6.7E-55  396.0  19.3  252    4-262    92-349 (373)
 81 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-49 4.5E-54  407.1  26.1  255    2-265   186-458 (543)
 82 3dls_A PAS domain-containing s 100.0 2.6E-50 8.8E-55  389.4  19.4  244    2-262    25-281 (335)
 83 3n9x_A Phosphotransferase; mal 100.0 4.2E-49 1.4E-53  393.7  28.8  260    2-264    27-370 (432)
 84 3dbq_A Dual specificity protei 100.0 5.7E-50   2E-54  387.6  21.6  252    2-262    10-280 (343)
 85 1vzo_A Ribosomal protein S6 ki 100.0 5.2E-50 1.8E-54  390.1  21.2  255    2-264    55-330 (355)
 86 2zmd_A Dual specificity protei 100.0   1E-49 3.4E-54  393.2  23.3  252    2-262    57-327 (390)
 87 3ork_A Serine/threonine protei 100.0 2.5E-50 8.5E-55  384.6  18.3  258    2-262    13-280 (311)
 88 3q5i_A Protein kinase; CDPK, m 100.0 1.7E-49 5.6E-54  404.0  25.5  253    2-262    37-308 (504)
 89 3lij_A Calcium/calmodulin depe 100.0 1.4E-49 4.9E-54  403.5  24.7  253    2-262    38-298 (494)
 90 3cok_A Serine/threonine-protei 100.0   1E-49 3.5E-54  373.4  21.8  251    2-262    12-269 (278)
 91 3ttj_A Mitogen-activated prote 100.0 5.4E-50 1.8E-54  403.8  21.3  253    2-262    63-362 (464)
 92 3nyv_A Calmodulin-domain prote 100.0 5.1E-50 1.8E-54  405.5  21.0  253    2-262    27-288 (484)
 93 3i6u_A CDS1, serine/threonine- 100.0 1.7E-50 5.7E-55  402.4  16.6  255    2-263   136-407 (419)
 94 3mwu_A Calmodulin-domain prote 100.0   1E-49 3.4E-54  403.8  22.6  253    2-262    23-283 (486)
 95 3llt_A Serine/threonine kinase 100.0 2.3E-49   8E-54  384.9  24.1  249    2-260    36-360 (360)
 96 1cm8_A Phosphorylated MAP kina 100.0 2.3E-49 7.9E-54  387.5  24.0  252    2-262    26-314 (367)
 97 2ac3_A MAP kinase-interacting  100.0 1.8E-49 6.2E-54  378.4  22.6  255    2-262    13-302 (316)
 98 3p1a_A MYT1 kinase, membrane-a 100.0 2.7E-49 9.3E-54  377.8  23.6  246    2-261    58-310 (311)
 99 3bhy_A Death-associated protei 100.0 1.5E-49   5E-54  372.9  21.4  255    2-263     6-273 (283)
100 3eb0_A Putative uncharacterize 100.0 6.8E-50 2.3E-54  392.9  20.0  255    2-263     8-329 (383)
101 2rku_A Serine/threonine-protei 100.0 4.5E-49 1.5E-53  372.2  24.6  251    2-262    16-272 (294)
102 2y7j_A Phosphorylase B kinase  100.0 4.3E-49 1.5E-53  385.1  25.2  250    2-260    95-364 (365)
103 2owb_A Serine/threonine-protei 100.0 3.5E-49 1.2E-53  380.9  23.8  251    2-262    42-298 (335)
104 3com_A Serine/threonine-protei 100.0 6.4E-49 2.2E-53  374.3  24.8  253    2-262    30-285 (314)
105 1x8b_A WEE1HU, WEE1-like prote 100.0 2.4E-49 8.2E-54  370.9  21.5  247    2-262    12-286 (289)
106 3fme_A Dual specificity mitoge 100.0 2.3E-49 7.7E-54  372.6  21.3  252    2-262     8-273 (290)
107 1j1b_A Glycogen synthase kinas 100.0 3.6E-49 1.2E-53  392.9  23.8  255    2-262    55-343 (420)
108 4eqm_A Protein kinase; transfe 100.0 2.2E-49 7.4E-54  375.5  21.1  252    2-259    12-271 (294)
109 3lm5_A Serine/threonine-protei 100.0   4E-49 1.4E-53  379.2  23.2  257    3-265    30-297 (327)
110 1u5q_A Serine/threonine protei 100.0   5E-49 1.7E-53  382.5  23.9  246    3-261    56-311 (348)
111 3qyz_A Mitogen-activated prote 100.0 8.8E-49   3E-53  382.2  25.3  257    2-262    28-320 (364)
112 3eqc_A Dual specificity mitoge 100.0 1.7E-49 5.9E-54  386.1  20.2  252    2-262    34-331 (360)
113 1phk_A Phosphorylase kinase; g 100.0 1.4E-48 4.8E-53  369.0  25.6  252    2-262    18-290 (298)
114 2jam_A Calcium/calmodulin-depe 100.0 4.5E-49 1.6E-53  374.2  21.7  253    2-262    10-268 (304)
115 3p86_A Serine/threonine-protei 100.0 1.2E-48 4.2E-53  373.3  24.7  244    2-255    38-291 (309)
116 2h6d_A 5'-AMP-activated protei 100.0 4.3E-49 1.5E-53  368.4  21.0  250    2-262    12-268 (276)
117 2clq_A Mitogen-activated prote 100.0 8.2E-49 2.8E-53  369.7  23.1  253    3-262    24-285 (295)
118 2j7t_A Serine/threonine-protei 100.0 5.8E-49   2E-53  372.3  21.8  253    2-262    20-282 (302)
119 1ua2_A CAK, cell division prot 100.0 9.1E-49 3.1E-53  379.6  23.2  252    2-262    11-298 (346)
120 3kvw_A DYRK2, dual specificity 100.0 1.1E-48 3.7E-53  390.5  24.2  251    2-262    98-415 (429)
121 2ycf_A Serine/threonine-protei 100.0 3.6E-49 1.2E-53  378.1  20.0  255    2-263    11-282 (322)
122 4euu_A Serine/threonine-protei 100.0 6.5E-49 2.2E-53  375.8  21.6  253    2-258    10-305 (319)
123 3mi9_A Cell division protein k 100.0 1.3E-48 4.4E-53  378.6  23.3  257    2-262    18-318 (351)
124 3s95_A LIMK-1, LIM domain kina 100.0 3.3E-49 1.1E-53  376.1  18.7  248    2-255    11-275 (310)
125 4aaa_A Cyclin-dependent kinase 100.0 3.2E-49 1.1E-53  380.1  18.7  254    2-262    26-313 (331)
126 2r3i_A Cell division protein k 100.0 2.1E-48 7.3E-53  367.9  24.0  252    2-262     4-290 (299)
127 4e7w_A Glycogen synthase kinas 100.0   8E-49 2.7E-53  387.2  21.8  255    2-263    41-329 (394)
128 3a7i_A MST3 kinase, serine/thr 100.0 2.1E-48 7.3E-53  369.1  23.8  251    2-262    23-277 (303)
129 2x7f_A TRAF2 and NCK-interacti 100.0 2.5E-48 8.5E-53  372.1  23.5  257    2-262    25-293 (326)
130 2xrw_A Mitogen-activated prote 100.0 3.5E-48 1.2E-52  379.3  25.0  253    2-262    26-325 (371)
131 2fst_X Mitogen-activated prote 100.0 7.6E-49 2.6E-53  383.9  19.9  252    2-262    30-318 (367)
132 1wak_A Serine/threonine-protei 100.0   9E-49 3.1E-53  384.3  19.9  254    2-260    38-396 (397)
133 4exu_A Mitogen-activated prote 100.0 3.7E-48 1.3E-52  379.1  24.2  251    2-262    43-330 (371)
134 3an0_A Dual specificity mitoge 100.0 7.2E-49 2.5E-53  378.6  18.7  252    2-262    52-317 (340)
135 2wtk_C Serine/threonine-protei 100.0 6.5E-48 2.2E-52  365.6  24.6  254    2-263     6-271 (305)
136 2vwi_A Serine/threonine-protei 100.0 7.3E-49 2.5E-53  371.1  17.9  255    2-262    16-294 (303)
137 4hcu_A Tyrosine-protein kinase 100.0 2.5E-48 8.6E-53  362.4  21.2  246    2-256    11-260 (269)
138 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.5E-48 1.9E-52  359.7  22.9  246    2-256     9-258 (268)
139 3e3p_A Protein kinase, putativ 100.0 2.6E-48 8.7E-53  377.1  21.0  256    2-263    24-322 (360)
140 2w5a_A Serine/threonine-protei 100.0 1.2E-48 3.9E-53  366.1  17.7  254    2-262     7-274 (279)
141 2wei_A Calmodulin-domain prote 100.0 5.6E-48 1.9E-52  363.7  21.7  253    2-262    23-283 (287)
142 1z57_A Dual specificity protei 100.0 5.1E-48 1.7E-52  370.4  21.6  252    2-262    15-335 (339)
143 2psq_A Fibroblast growth facto 100.0 1.1E-47 3.7E-52  376.0  24.3  247    2-256    82-358 (370)
144 3byv_A Rhoptry kinase; malaria 100.0 8.8E-50   3E-54  391.3   9.4  246    2-262    74-366 (377)
145 3coi_A Mitogen-activated prote 100.0 1.2E-47 4.2E-52  372.2  24.4  251    2-262    25-312 (353)
146 3vhe_A Vascular endothelial gr 100.0 2.4E-48 8.3E-53  377.1  19.3  249    2-256    23-349 (359)
147 2b9h_A MAP kinase FUS3, mitoge 100.0 9.2E-48 3.1E-52  372.2  23.3  258    2-263    12-313 (353)
148 3q60_A ROP5B; pseudokinase, tr 100.0 9.5E-49 3.2E-53  383.0  16.1  256    2-264    63-361 (371)
149 2pml_X PFPK7, Ser/Thr protein  100.0   2E-48 6.9E-53  376.1  18.2  249    2-263    32-330 (348)
150 1zy4_A Serine/threonine-protei 100.0 9.9E-48 3.4E-52  362.7  22.3  256    2-262     7-290 (303)
151 3fhr_A MAP kinase-activated pr 100.0 5.5E-48 1.9E-52  373.0  20.9  257    2-262    29-294 (336)
152 3rgf_A Cyclin-dependent kinase 100.0 9.7E-48 3.3E-52  380.3  23.1  257    3-262    22-340 (405)
153 1q8y_A SR protein kinase; tran 100.0 5.2E-48 1.8E-52  376.4  20.5  256    2-262    20-340 (373)
154 3gen_A Tyrosine-protein kinase 100.0 6.6E-48 2.3E-52  361.9  20.5  246    2-256    25-274 (283)
155 3q4u_A Activin receptor type-1 100.0 8.5E-48 2.9E-52  363.8  21.2  249    2-255     9-295 (301)
156 1blx_A Cyclin-dependent kinase 100.0 1.9E-47 6.4E-52  365.8  23.9  256    2-263    12-304 (326)
157 3pg1_A Mitogen-activated prote 100.0 6.7E-48 2.3E-52  374.9  21.1  254    2-262    23-323 (362)
158 3kul_A Ephrin type-A receptor  100.0   2E-47   7E-52  367.3  23.5  246    2-255    50-306 (325)
159 3qup_A Tyrosine-protein kinase 100.0 7.8E-48 2.7E-52  368.5  20.0  257    2-262    24-305 (323)
160 3lb7_A RAF proto-oncogene seri 100.0 1.5E-47   5E-52  365.5  21.7  249    2-260    37-298 (307)
161 3l9p_A Anaplastic lymphoma kin 100.0 3.9E-48 1.3E-52  378.6  17.6  255    2-262    72-345 (367)
162 1mp8_A Focal adhesion kinase 1 100.0 1.8E-47   6E-52  359.2  20.9  246    2-256    16-270 (281)
163 3cek_A Dual specificity protei 100.0 2.5E-47 8.7E-52  363.6  22.0  252    2-262    29-299 (313)
164 2i6l_A Mitogen-activated prote 100.0 9.8E-48 3.4E-52  365.8  19.1  258    2-263    12-313 (320)
165 2h34_A Serine/threonine-protei 100.0 2.4E-47 8.2E-52  363.8  21.5  247    2-255    35-289 (309)
166 1luf_A Muscle-specific tyrosin 100.0 2.3E-47 7.7E-52  367.7  21.2  247    2-256    48-329 (343)
167 3ugc_A Tyrosine-protein kinase 100.0 1.1E-47 3.6E-52  363.0  18.5  250    2-255    11-284 (295)
168 2ivs_A Proto-oncogene tyrosine 100.0 2.7E-47 9.3E-52  362.5  21.4  247    2-256    24-305 (314)
169 4f0f_A Serine/threonine-protei 100.0 5.6E-47 1.9E-51  356.3  23.2  244    2-255    20-282 (287)
170 3soc_A Activin receptor type-2 100.0 1.2E-47 4.2E-52  368.0  18.8  249    2-255    25-311 (322)
171 2eu9_A Dual specificity protei 100.0 2.1E-47 7.3E-52  368.7  20.5  253    2-263    20-341 (355)
172 3cbl_A C-FES, proto-oncogene t 100.0   1E-47 3.5E-52  376.9  18.0  246    2-255   115-367 (377)
173 3dtc_A Mitogen-activated prote 100.0 4.6E-47 1.6E-51  353.7  21.5  244    2-256     8-267 (271)
174 2vx3_A Dual specificity tyrosi 100.0 2.3E-47 7.7E-52  374.8  20.5  251    2-262    55-379 (382)
175 3kfa_A Tyrosine-protein kinase 100.0 2.6E-47   9E-52  358.5  19.3  246    2-255    14-264 (288)
176 1csn_A Casein kinase-1; phosph 100.0 6.7E-47 2.3E-51  357.1  22.1  250    2-256    11-277 (298)
177 1rjb_A FL cytokine receptor; k 100.0 5.5E-47 1.9E-51  365.7  21.3  249    2-257    46-329 (344)
178 3t9t_A Tyrosine-protein kinase 100.0 5.3E-47 1.8E-51  352.3  20.4  246    2-256     9-258 (267)
179 2izr_A Casein kinase I isoform 100.0 3.1E-47 1.1E-51  366.1  18.9  248    2-255    10-274 (330)
180 3tt0_A Basic fibroblast growth 100.0 1.3E-46 4.6E-51  369.5  23.7  247    2-256    70-346 (382)
181 2v62_A Serine/threonine-protei 100.0 1.9E-47 6.4E-52  370.2  17.2  253    2-255    38-321 (345)
182 3a99_A Proto-oncogene serine/t 100.0 5.3E-48 1.8E-52  370.3  13.2  243    2-262    44-300 (320)
183 3cc6_A Protein tyrosine kinase 100.0 4.9E-47 1.7E-51  355.9  19.4  246    2-256    13-267 (281)
184 2a19_B Interferon-induced, dou 100.0   4E-47 1.4E-51  355.9  18.6  247    2-260    12-272 (284)
185 3kmu_A ILK, integrin-linked ki 100.0   1E-46 3.6E-51  350.4  21.1  241    2-255    11-263 (271)
186 3poz_A Epidermal growth factor 100.0 7.8E-47 2.7E-51  363.2  20.7  246    2-256    16-272 (327)
187 4e5w_A Tyrosine-protein kinase 100.0 1.2E-46   4E-51  356.4  21.5  250    2-255    22-295 (302)
188 2iwi_A Serine/threonine-protei 100.0 2.4E-47 8.3E-52  363.3  16.7  244    2-263    32-291 (312)
189 3p23_A Serine/threonine-protei 100.0 2.9E-47 9.8E-52  380.6  17.9  256    2-263    25-291 (432)
190 1t46_A HOMO sapiens V-KIT hard 100.0   5E-47 1.7E-51  360.5  18.7  248    2-256    24-301 (313)
191 3aln_A Dual specificity mitoge 100.0 6.5E-47 2.2E-51  362.9  19.2  251    2-262    23-292 (327)
192 3op5_A Serine/threonine-protei 100.0 7.2E-47 2.4E-51  368.7  19.7  253    2-255    36-322 (364)
193 1opk_A P150, C-ABL, proto-onco 100.0 9.7E-47 3.3E-51  383.0  21.4  246    2-255   221-471 (495)
194 2buj_A Serine/threonine-protei 100.0 3.2E-47 1.1E-51  363.0  16.7  250    2-256    30-300 (317)
195 2eva_A TAK1 kinase - TAB1 chim 100.0 2.6E-46   9E-51  356.4  22.8  242    2-256     9-257 (307)
196 4hgt_A Casein kinase I isoform 100.0 2.2E-46 7.6E-51  352.9  21.7  248    2-255    10-273 (296)
197 3uim_A Brassinosteroid insensi 100.0   2E-47 6.7E-52  366.1  14.7  250    2-258    31-307 (326)
198 3uzp_A CKI-delta, CKID, casein 100.0 3.1E-46 1.1E-50  352.2  22.7  248    2-255    10-273 (296)
199 1xbb_A Tyrosine-protein kinase 100.0 2.4E-46 8.2E-51  353.2  21.9  245    2-255    17-272 (291)
200 2xir_A Vascular endothelial gr 100.0 5.9E-47   2E-51  360.4  17.8  249    2-256    28-304 (316)
201 4fvq_A Tyrosine-protein kinase 100.0 3.5E-47 1.2E-51  357.8  15.9  243    2-256     9-269 (289)
202 2dyl_A Dual specificity mitoge 100.0 2.1E-46 7.2E-51  357.0  21.4  251    2-262    26-290 (318)
203 1qpc_A LCK kinase; alpha beta  100.0 2.5E-46 8.6E-51  350.5  21.5  244    2-255    14-262 (279)
204 2wqm_A Serine/threonine-protei 100.0 4.3E-46 1.5E-50  354.3  23.4  248    2-256    33-291 (310)
205 3lxl_A Tyrosine-protein kinase 100.0 9.8E-47 3.4E-51  361.9  19.1  251    2-256    24-297 (327)
206 3kex_A Receptor tyrosine-prote 100.0   8E-47 2.7E-51  362.7  18.0  246    2-256    14-270 (325)
207 1u59_A Tyrosine-protein kinase 100.0 6.1E-46 2.1E-50  349.8  23.3  248    2-258    10-268 (287)
208 3og7_A AKAP9-BRAF fusion prote 100.0 2.8E-46 9.4E-51  352.7  20.9  244    2-255    25-281 (289)
209 3pls_A Macrophage-stimulating  100.0 6.7E-46 2.3E-50  350.3  23.2  248    2-255    22-280 (298)
210 3lzb_A Epidermal growth factor 100.0   4E-46 1.4E-50  358.6  21.9  246    2-256    16-272 (327)
211 1p4o_A Insulin-like growth fac 100.0 1.9E-46 6.4E-51  358.5  19.5  247    2-256    26-293 (322)
212 2qkw_B Protein kinase; three-h 100.0 5.5E-47 1.9E-51  362.7  15.9  249    2-257    40-310 (321)
213 2i1m_A Macrophage colony-stimu 100.0 1.4E-46 4.6E-51  361.4  18.6  248    2-256    47-320 (333)
214 2pvf_A Fibroblast growth facto 100.0 4.5E-46 1.5E-50  358.6  22.0  247    2-256    36-312 (334)
215 1fvr_A Tyrosine-protein kinase 100.0 2.7E-46 9.2E-51  358.9  20.3  245    2-256    26-294 (327)
216 3mdy_A Bone morphogenetic prot 100.0 5.4E-46 1.9E-50  356.9  22.2  250    2-256    38-325 (337)
217 1k9a_A Carboxyl-terminal SRC k 100.0   1E-45 3.5E-50  371.2  25.1  241    2-255   194-438 (450)
218 2rio_A Serine/threonine-protei 100.0 2.1E-46 7.2E-51  374.4  19.9  254    3-262    17-302 (434)
219 2qol_A Ephrin receptor; recept 100.0 2.8E-46 9.7E-51  366.4  19.6  246    2-255    46-302 (373)
220 3f66_A Hepatocyte growth facto 100.0 9.9E-46 3.4E-50  349.7  22.5  247    2-255    26-284 (298)
221 3brb_A Proto-oncogene tyrosine 100.0 6.9E-46 2.3E-50  353.4  21.5  251    2-256    35-302 (313)
222 2yfx_A Tyrosine-protein kinase 100.0 2.4E-46 8.2E-51  359.2  18.4  255    2-262    31-304 (327)
223 4eut_A Serine/threonine-protei 100.0 8.8E-47   3E-51  372.6  15.0  251    2-256    10-303 (396)
224 1qcf_A Haematopoetic cell kina 100.0 3.5E-46 1.2E-50  374.8  19.2  244    2-255   189-437 (454)
225 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.6E-46 1.6E-50  363.0  18.9  244    2-258    66-334 (365)
226 1byg_A CSK, protein (C-termina 100.0 8.1E-46 2.8E-50  347.1  19.3  241    2-255    22-266 (278)
227 3g2f_A Bone morphogenetic prot 100.0 1.3E-45 4.3E-50  354.8  20.9  249    2-255    14-311 (336)
228 2jii_A Serine/threonine-protei 100.0 3.1E-46   1E-50  362.5  16.8  248    2-255    43-329 (352)
229 1mqb_A Ephrin type-A receptor  100.0 2.9E-45   1E-49  353.3  23.3  247    2-256    45-303 (333)
230 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.9E-46 3.1E-50  371.8  20.1  244    2-255   185-433 (452)
231 3lxp_A Non-receptor tyrosine-p 100.0 9.1E-46 3.1E-50  354.2  18.6  248    3-255    33-303 (318)
232 3c1x_A Hepatocyte growth facto 100.0 1.3E-45 4.6E-50  361.7  19.8  248    2-256    90-349 (373)
233 1b6c_B TGF-B superfamily recep 100.0 2.1E-45 7.3E-50  353.8  19.7  250    2-256    43-330 (342)
234 1u46_A ACK-1, activated CDC42  100.0 1.5E-45   5E-50  346.8  18.2  247    2-256    19-278 (291)
235 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-45 7.5E-50  352.6  19.1  250    2-255    42-315 (326)
236 3ll6_A Cyclin G-associated kin 100.0 2.9E-45 9.8E-50  351.3  18.3  249    2-258    29-304 (337)
237 3gxj_A TGF-beta receptor type- 100.0 3.3E-47 1.1E-51  359.8   4.4  249    2-255     4-290 (303)
238 3m2w_A MAP kinase-activated pr 100.0 2.2E-44 7.7E-49  341.5  23.7  235    2-262    18-263 (299)
239 2nru_A Interleukin-1 receptor- 100.0 7.2E-45 2.5E-49  345.2  20.4  245    3-256    33-300 (307)
240 4fl3_A Tyrosine-protein kinase 100.0 6.6E-45 2.3E-49  379.8  20.7  241    6-255   374-624 (635)
241 2ozo_A Tyrosine-protein kinase 100.0 2.3E-44 7.9E-49  374.5  23.6  239    8-255   343-591 (613)
242 2h8h_A Proto-oncogene tyrosine 100.0 5.4E-45 1.9E-49  373.6  17.7  244    2-255   268-516 (535)
243 3sv0_A Casein kinase I-like; t 100.0 3.1E-44 1.1E-48  363.1  21.0  248    2-255     8-271 (483)
244 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-44 4.2E-49  345.1  16.4  243    2-255    34-295 (319)
245 2vuw_A Serine/threonine-protei 100.0 2.7E-46 9.3E-51  360.4   4.5  244    2-260    21-336 (336)
246 3qa8_A MGC80376 protein; kinas 100.0 2.8E-45 9.6E-50  380.9  12.3  260    2-263    15-305 (676)
247 2j0j_A Focal adhesion kinase 1 100.0 6.6E-44 2.3E-48  373.5  20.8  246    2-256   391-645 (656)
248 3dzo_A Rhoptry kinase domain;  100.0 1.7E-44 5.8E-49  358.4  10.3  246    3-263    80-371 (413)
249 2pzi_A Probable serine/threoni 100.0   7E-43 2.4E-47  367.6  14.9  238    2-261    81-326 (681)
250 3uqc_A Probable conserved tran 100.0 3.7E-42 1.3E-46  325.2  15.9  218    2-256    32-259 (286)
251 4azs_A Methyltransferase WBDD; 100.0 5.7E-35   2E-39  301.0   9.0  226    8-260   241-480 (569)
252 3en9_A Glycoprotease, O-sialog 100.0 1.5E-30 5.1E-35  266.5   6.4  181    5-203   340-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9   1E-26 3.5E-31  219.1  11.9  153    3-188    92-275 (282)
254 1zth_A RIO1 serine protein kin  99.9 1.1E-22 3.7E-27  188.9  11.0  134    3-151    49-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.8 5.2E-19 1.8E-23  172.5   8.3  135    3-150    97-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.4 4.9E-13 1.7E-17  123.2  11.2  136    2-150    15-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.3 3.6E-12 1.2E-16  116.5   9.1  127   10-151    29-215 (264)
258 3dxp_A Putative acyl-COA dehyd  99.2 3.9E-11 1.3E-15  115.8  11.2  141    5-151    42-249 (359)
259 3sg8_A APH(2'')-ID; antibiotic  99.1 6.8E-11 2.3E-15  111.5   7.3  184    6-202    25-287 (304)
260 3r70_A Aminoglycoside phosphot  98.9 5.7E-09   2E-13   99.1  11.9  132    3-151    39-238 (320)
261 3tdw_A Gentamicin resistance p  98.7 1.7E-07 5.8E-12   88.4  12.5  137    5-151    23-225 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.6 1.9E-07 6.4E-12   85.9  12.0  134    8-151    31-224 (272)
263 3d1u_A Putative fructosamine-3  98.4 1.8E-06 6.3E-11   80.7  13.2   74    4-86     18-97  (288)
264 3ovc_A Hygromycin-B 4-O-kinase  98.4 1.4E-06 4.9E-11   84.1  11.6   76    5-87     45-122 (362)
265 2olc_A MTR kinase, methylthior  98.3 2.8E-06 9.5E-11   82.8  10.8   74    5-84     34-120 (397)
266 2q83_A YTAA protein; 2635576,   98.2 1.7E-05 5.9E-10   74.8  13.9   77    5-86     36-118 (346)
267 3ats_A Putative uncharacterize  98.1 2.3E-06 7.8E-11   82.0   6.3   80    6-87     25-121 (357)
268 2yle_A Protein spire homolog 1  97.9 7.6E-05 2.6E-09   66.3  10.0  121   85-242    34-156 (229)
269 3jr1_A Putative fructosamine-3  97.9 9.5E-05 3.2E-09   69.8  11.5   76    5-86     40-118 (312)
270 3dxq_A Choline/ethanolamine ki  97.8   8E-05 2.7E-09   69.5  10.4   72    3-86     20-95  (301)
271 2pyw_A Uncharacterized protein  97.8  0.0001 3.6E-09   72.2  10.8   32  117-151   231-262 (420)
272 3csv_A Aminoglycoside phosphot  97.5  0.0003   1E-08   66.4   9.9  139    6-151    23-218 (333)
273 2ppq_A HSK, HK, homoserine kin  97.4 0.00033 1.1E-08   65.6   8.7  140    5-150    26-217 (322)
274 3f7w_A Putative fructosamine-3  97.4  0.0019 6.7E-08   59.5  13.0   74    4-86     18-97  (288)
275 1nw1_A Choline kinase (49.2 KD  97.4 0.00053 1.8E-08   67.6   9.5   73    5-85     77-158 (429)
276 1zyl_A Hypothetical protein YI  97.3  0.0011 3.7E-08   62.3  10.1   76    6-85     31-113 (328)
277 3feg_A Choline/ethanolamine ki  97.2 0.00097 3.3E-08   64.6   9.3  137    6-150    55-254 (379)
278 2qg7_A Ethanolamine kinase PV0  97.0  0.0022 7.7E-08   63.6   9.5   74    5-86    112-188 (458)
279 3c5i_A Choline kinase; choline  96.9  0.0019 6.5E-08   61.9   7.9   72    6-85     38-120 (369)
280 3i1a_A Spectinomycin phosphotr  96.9  0.0055 1.9E-07   58.1  10.8   31  119-151   207-237 (339)
281 3f2s_A CK, chetk-alpha, cholin  95.9   0.039 1.3E-06   53.6  10.3  138    5-150    56-280 (401)
282 3mes_A Choline kinase; malaria  95.3   0.024 8.2E-07   55.6   6.4   73    6-86     75-157 (424)
283 3g15_A CK, chetk-alpha, cholin  94.1    0.13 4.6E-06   49.6   8.3   31  120-150   246-280 (401)
284 3cxl_A N-chimerin; SH2, RHO-GA  83.3    0.11 3.8E-06   51.4  -2.3   57    6-65    147-214 (463)
285 1cja_A Protein (actin-fragmin   70.2     9.8 0.00034   35.6   7.0  135    7-150    75-237 (342)
286 4ano_A ESSB; membrane protein,  55.3      18 0.00063   31.6   5.6  116   53-203    48-163 (219)
287 2ybx_A Phosphatidylinositol-5-  47.0 1.8E+02  0.0061   27.6  11.6  107   12-121   117-261 (394)
288 4ann_A ESSB; membrane protein,  44.7      19 0.00063   31.5   3.9  116   53-203    43-158 (215)
289 2x6h_A GH13170P, VPS34, phosph  38.2      73  0.0025   32.8   7.7   67   77-149   490-575 (696)
290 3oja_A Leucine-rich immune mol  29.3     4.9 0.00017   39.5  -2.7   30   39-68    323-352 (487)

No 1  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.1e-65  Score=490.15  Aligned_cols=255  Identities=27%  Similarity=0.445  Sum_probs=224.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      ||++++.||+|+||+||+|+++.+|+.||||++.+      ...+.+.+|+++|++|+|||||++++++.+...    +|
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~----~y  108 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK----LY  108 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EE
T ss_pred             ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE----EE
Confidence            59999999999999999999999999999999863      345678999999999999999999999876543    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||||+||+|.+++++.+.++|..++.|++||+.||+|||++||+||||||+|||++.++.  +||+|||+|+......
T Consensus       109 ivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~--vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          109 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPES  186 (311)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECCTTT
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCC--EEEEEcCCceecCCCC
Confidence            99999999999999998888999999999999999999999999999999999999987776  9999999999875332


Q ss_pred             -CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          156 -DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       156 -~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       .....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||... +......++..  ..+.+|..+|+++++
T Consensus       187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~d  263 (311)
T 4aw0_A          187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIK--LEYDFPEKFFPKARD  263 (311)
T ss_dssp             TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--TCCCCCTTCCHHHHH
T ss_pred             CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHc--CCCCCCcccCHHHHH
Confidence             22345679999999999999999999999999999999999999999764 45555555432  234567789999999


Q ss_pred             HHHHhhhcCCCCCCCHHH------HHhCccccccccc
Q 040569          235 FLSKCLIRNPGERWSASE------LLEHGFVKEQNFK  265 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~e------lL~hp~~~~~~~~  265 (385)
                      ||.+||++||.+|||++|      +++||||+..++.
T Consensus       264 li~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~  300 (311)
T 4aw0_A          264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE  300 (311)
T ss_dssp             HHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred             HHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHH
Confidence            999999999999999987      5899999987654


No 2  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.7e-64  Score=478.55  Aligned_cols=252  Identities=29%  Similarity=0.432  Sum_probs=219.1

Q ss_pred             eeeceeeccCceEEEEEEECCCCcEEEEEeccCC-----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            4 TRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +..+.||+|+||+||+|+++.+++.||+|.+...     ..+.+.+|+++|++|+|||||++++++.+...+...++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5677899999999999999999999999988532     13567899999999999999999999877655556678999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCEEeec-CCCCCeEEeecCceeeecccC
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNG--IVHCDIKGQNILVSK-DNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~g--ivHrDlKp~NILi~~-~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      |||+||+|.+++++.+.+++..++.+++||+.||+|||++|  |+||||||+||||+. ++.  +||+|||+|+...   
T Consensus       109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~--vKl~DFGla~~~~---  183 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGLATLKR---  183 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSC--EEECCTTGGGGCC---
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCC--EEEEeCcCCEeCC---
Confidence            99999999999998888999999999999999999999998  999999999999974 444  9999999997542   


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                      .....+.+|||.|||||++.+ .|+.++|||||||++|||+||++||.+..+.......+......+.++...++++++|
T Consensus       184 ~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  262 (290)
T 3fpq_A          184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI  262 (290)
T ss_dssp             TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred             CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHH
Confidence            223456789999999999875 5999999999999999999999999876666666666654444455677789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      |.+||++||.+|||++|+|+||||++
T Consensus       263 i~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          263 IEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHccCChhHCcCHHHHhcCccccC
Confidence            99999999999999999999999975


No 3  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.7e-64  Score=488.58  Aligned_cols=252  Identities=31%  Similarity=0.493  Sum_probs=219.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC---CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL---SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      .|++++.||+|+||+||+|+++.+|+.||||++..   ...+.+.+|+++|++++|||||++++++.+...    +||||
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~----~~ivm  150 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE----LWVVM  150 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTE----EEEEE
T ss_pred             hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE----EEEEE
Confidence            48999999999999999999999999999999864   335678899999999999999999999877654    77999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      |||+||+|.+++.++ +++|..++.+++||+.||+|||++||+||||||+||||+.++.  +||+|||+|+..... ...
T Consensus       151 Ey~~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~-~~~  226 (346)
T 4fih_A          151 EFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKE-VPR  226 (346)
T ss_dssp             CCCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSS-SCC
T ss_pred             eCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCC--EEEecCcCceecCCC-CCc
Confidence            999999999999865 5999999999999999999999999999999999999988776  999999999986432 223


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC-CCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS-SDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~ll~  237 (385)
                      ..+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+. +....+..+... ......+..+|+++++||.
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  305 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  305 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCCCCCCCccccCCHHHHHHHH
Confidence            45678999999999999999999999999999999999999999874 455555544322 1222334568999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhCcccccc
Q 040569          238 KCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||++||.+|||++|+|+||||++.
T Consensus       306 ~~L~~dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          306 RLLVRDPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHcCCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999999999864


No 4  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=5.9e-64  Score=471.27  Aligned_cols=248  Identities=27%  Similarity=0.416  Sum_probs=205.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+|+.||||++.+.      ..+.+.+|+++|++++|||||++++++.+...    +|
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~----~~   89 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE----II   89 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE----EE
Confidence            699999999999999999999999999999998643      23568899999999999999999999876543    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||| +|+|.+++.+.+++++..++.+++||+.||+|||++||+||||||+|||++.++.  +||+|||+|+....  
T Consensus        90 ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~--vkl~DFGla~~~~~--  164 (275)
T 3hyh_A           90 MVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN--VKIADFGLSNIMTD--  164 (275)
T ss_dssp             EEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCC--EEECCSSCC-------
T ss_pred             EEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCC--EEEeecCCCeecCC--
Confidence            999999 6799999998888999999999999999999999999999999999999987766  99999999987532  


Q ss_pred             CCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                      .....+.+||+.|||||++.+..+ +.++|||||||++|+|+||+.||... +.......+..  ..+.+|..+|+++++
T Consensus       165 ~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~~  241 (275)
T 3hyh_A          165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-SIPVLFKNISN--GVYTLPKFLSPGAAG  241 (275)
T ss_dssp             ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--TCCCCCTTSCHHHHH
T ss_pred             CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHc--CCCCCCCCCCHHHHH
Confidence            223456789999999999998876 57999999999999999999999764 44444444422  335567889999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      ||.+||++||.+|||++|+|+||||+.
T Consensus       242 li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          242 LIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             HHHHHccCChhHCcCHHHHHcCccccc
Confidence            999999999999999999999999964


No 5  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.5e-64  Score=489.72  Aligned_cols=252  Identities=27%  Similarity=0.467  Sum_probs=213.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+|+.||||++.+..     .+.+.+|+++|++|+|||||++++++.+...    +||
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~----~yi  100 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGS----LYI  100 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----EEE
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCE----EEE
Confidence            6999999999999999999999999999999987542     3567899999999999999999999876543    679


Q ss_pred             EEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           77 FLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      |||||+||+|.++|..  +..++|..++.|+.||+.||+|||++||+||||||+||||+.++.  +||+|||+|+.....
T Consensus       101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT--VQLGDFGIARVLNST  178 (350)
T ss_dssp             EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCC--EEECSTTEESCCCHH
T ss_pred             EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCC--EEEcccccceeecCC
Confidence            9999999999999973  345799999999999999999999999999999999999988776  999999999876322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                      . ......+||+.|||||++.+..|+.++|||||||++|||++|++||... +....+.++.. ...+.++..+|+++++
T Consensus       179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~-~~~~~~~~~~s~~~~~  255 (350)
T 4b9d_A          179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-SMKNLVLKIIS-GSFPPVSLHYSYDLRS  255 (350)
T ss_dssp             H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHH-TCCCCCCTTSCHHHHH
T ss_pred             c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHc-CCCCCCCccCCHHHHH
Confidence            1 1123568999999999999999999999999999999999999999874 45555555533 3445667789999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||.+||++||.+|||++|+|+||||+..
T Consensus       256 li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          256 LVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             HHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence            9999999999999999999999999754


No 6  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=3.2e-63  Score=491.05  Aligned_cols=252  Identities=31%  Similarity=0.493  Sum_probs=220.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      .|++++.||+|+||+||+|+++.+|+.||||++...   ..+.+.+|+.+|++|+|||||++++++.....    +||||
T Consensus       152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~----~~iVm  227 (423)
T 4fie_A          152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE----LWVVM  227 (423)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTE----EEEEE
T ss_pred             hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCE----EEEEE
Confidence            489999999999999999999999999999998643   35678899999999999999999999877553    77999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      |||+||+|.++++.+ +++|..++.+++||+.||+|||++|||||||||+||||+.++.  +||+|||+|+..... ...
T Consensus       228 Ey~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~--vKl~DFGla~~~~~~-~~~  303 (423)
T 4fie_A          228 EFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKE-VPR  303 (423)
T ss_dssp             ECCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCC--EEECCCTTCEECCSS-CCC
T ss_pred             eCCCCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCC--EEEecCccceECCCC-Ccc
Confidence            999999999999865 5999999999999999999999999999999999999988776  999999999976432 223


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC-CCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS-SDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~ll~  237 (385)
                      ....+||+.|||||++.+..|+.++|||||||++|||++|++||.+. +....+..+... ......+..+|+++++||.
T Consensus       304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  382 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  382 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCCCCCCcccccCCHHHHHHHH
Confidence            45678999999999999999999999999999999999999999874 455555554322 2223345568999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhCcccccc
Q 040569          238 KCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||++||.+|||+.|+|+||||+..
T Consensus       383 ~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          383 RLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHcCCChhHCcCHHHHhcCHHhcCC
Confidence            9999999999999999999999754


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=6.5e-64  Score=477.24  Aligned_cols=254  Identities=26%  Similarity=0.416  Sum_probs=214.2

Q ss_pred             CceeeceeeccCceEEEEEEEC---CCCcEEEEEeccCC-----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN---RSSEVFAVKSAELS-----NSEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++++.||+|+||+||+|++.   .+++.||||++.+.     ....+.+|+++|++++|||||++++++.+...    
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~----  100 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK----  100 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTE----
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE----
Confidence            5999999999999999999874   46899999988643     23467889999999999999999999876543    


Q ss_pred             EEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           74 YNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      +|||||||+||+|.+++++.+.++|..++.+++||+.||+|||++||+||||||+|||++.++.  +||+|||+|+....
T Consensus       101 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~  178 (304)
T 3ubd_A          101 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESID  178 (304)
T ss_dssp             EEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSC--EEEESSEEEEC---
T ss_pred             EEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCC--EEecccccceeccC
Confidence            7799999999999999998888999999999999999999999999999999999999988776  99999999987532


Q ss_pred             cCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHH
Q 040569          154 NEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQ  233 (385)
Q Consensus       154 ~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  233 (385)
                      . .....+.+||+.|||||++.+..|+.++|||||||++|||+||++||... +....+.++..  ..+.+|..+|++++
T Consensus       179 ~-~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~  254 (304)
T 3ubd_A          179 H-EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-DRKETMTMILK--AKLGMPQFLSPEAQ  254 (304)
T ss_dssp             ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHH
T ss_pred             C-CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-CHHHHHHHHHc--CCCCCCCcCCHHHH
Confidence            2 22345678999999999999999999999999999999999999999874 45555555432  23456778999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHhCccccccccc
Q 040569          234 DFLSKCLIRNPGERWS-----ASELLEHGFVKEQNFK  265 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps-----~~elL~hp~~~~~~~~  265 (385)
                      +||.+||++||.+|||     ++|+++||||+..++.
T Consensus       255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~  291 (304)
T 3ubd_A          255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWN  291 (304)
T ss_dssp             HHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred             HHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHH
Confidence            9999999999999998     5799999999987653


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=3.9e-63  Score=477.64  Aligned_cols=244  Identities=31%  Similarity=0.421  Sum_probs=205.8

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEeecC
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEYAP   82 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey~~   82 (385)
                      |++.+.||+|+||+||+|+++.+|+.||||+++...  ...+|+.+|++|+|||||++++++.+...    +|||||||+
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~--~~~~E~~il~~l~HpnIV~l~~~~~~~~~----~~ivmEy~~  133 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV--FRVEELVACAGLSSPRIVPLYGAVREGPW----VNIFMELLE  133 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCTHHHHTTTTCCCTTBCCEEEEEEETTE----EEEEECCCT
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH--hHHHHHHHHHhCCCCCCCcEEEEEEECCE----EEEEEeccC
Confidence            678889999999999999999999999999997643  23579999999999999999999876543    679999999


Q ss_pred             CCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC----C
Q 040569           83 GGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD----E  158 (385)
Q Consensus        83 ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~----~  158 (385)
                      ||+|.++|++.+++++..++.|+.||+.||+|||++||+||||||+||||+.++. .+||+|||+|+........    .
T Consensus       134 gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-~vKl~DFGla~~~~~~~~~~~~~~  212 (336)
T 4g3f_A          134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT  212 (336)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSC-CEEECCCTTCEEC-----------
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCC-EEEEeeCCCCeEccCCCcccceec
Confidence            9999999998788999999999999999999999999999999999999987652 3999999999976433221    2


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc-CCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG-FSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      ....+||+.|||||++.+..|+.++|||||||++|||+||++||....... ...++. .......++..+|+++++||.
T Consensus       213 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~s~~~~~li~  291 (336)
T 4g3f_A          213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEPPPIREIPPSCAPLTAQAIQ  291 (336)
T ss_dssp             -CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSCCGGGGSCTTSCHHHHHHHH
T ss_pred             CCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCCCCchhcCccCCHHHHHHHH
Confidence            234689999999999999999999999999999999999999997643322 222222 222234567789999999999


Q ss_pred             HhhhcCCCCCCCHHHHH
Q 040569          238 KCLIRNPGERWSASELL  254 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL  254 (385)
                      +||++||.+|||+.|++
T Consensus       292 ~~L~~dP~~R~sa~el~  308 (336)
T 4g3f_A          292 EGLRKEPVHRASAMELR  308 (336)
T ss_dssp             HHTCSSGGGSCCHHHHH
T ss_pred             HHccCCHhHCcCHHHHH
Confidence            99999999999999984


No 9  
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=3.4e-61  Score=458.69  Aligned_cols=256  Identities=22%  Similarity=0.352  Sum_probs=201.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC-------
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENG-------   70 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~-------   70 (385)
                      ||++++.||+|+||+||+|+++.+|+.||||.+....    .+.+.+|+++|++|+|||||++++++......       
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            5899999999999999999999999999999986543    24678999999999999999999998765432       


Q ss_pred             -eEEEEEEEeecCCCCHHHHHHcCCCC---CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecC
Q 040569           71 -KILYNLFLEYAPGGTLTDAIRSGTCL---EEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFG  146 (385)
Q Consensus        71 -~~~~~lv~Ey~~ggsL~~~l~~~~~l---~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG  146 (385)
                       ..++|+|||||+||+|.+++...+.+   ++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~--vKl~DFG  163 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV--VKVGDFG  163 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCc--EEEccCc
Confidence             23467999999999999999866544   45668999999999999999999999999999999988766  9999999


Q ss_pred             ceeeecccCCC-----------CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh
Q 040569          147 CARRARVNEDD-----------EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI  215 (385)
Q Consensus       147 ~a~~~~~~~~~-----------~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~  215 (385)
                      +|+........           .....+||+.|||||++.+..|+.++|||||||++|||++   ||....+....+..+
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~  240 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV  240 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHH
Confidence            99876433221           1234589999999999999999999999999999999996   786433333333333


Q ss_pred             cCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          216 GFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       216 ~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      . ....|..+...++.+++||.+||++||.+|||+.|+|+||||++.+
T Consensus       241 ~-~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          241 R-NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             H-TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             h-cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            2 2233333344677889999999999999999999999999998654


No 10 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.5e-59  Score=460.46  Aligned_cols=257  Identities=27%  Similarity=0.332  Sum_probs=211.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC--CeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEEN--GKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+|+.||||++....     .+.+.+|+++|++|+|||||++++++.....  ....+
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~  134 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV  134 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred             CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence            4899999999999999999999999999999986432     2456789999999999999999998754321  11226


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      |||||||. |+|.+++.+.+++++..++.+++||+.||+|||++||+||||||+|||++.++.  +||+|||+|+.....
T Consensus       135 ~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~--~Ki~DFGla~~~~~~  211 (398)
T 4b99_A          135 YVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE--LKIGDFGMARGLCTS  211 (398)
T ss_dssp             EEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC--EEECCCTTCBCC---
T ss_pred             EEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCC--EEEeecceeeecccC
Confidence            79999996 689999998889999999999999999999999999999999999999987766  999999999876432


Q ss_pred             C---CCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCC---------
Q 040569          155 E---DDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDT---------  221 (385)
Q Consensus       155 ~---~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~---------  221 (385)
                      .   .....+.+||+.|||||++.+. .++.++||||+||++|||++|++||.+. +....+..+......         
T Consensus       212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~-~~~~~l~~I~~~~g~p~~~~~~~~  290 (398)
T 4b99_A          212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK-NYVHQLQLIMMVLGTPSPAVIQAV  290 (398)
T ss_dssp             ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS-SHHHHHHHHHHHHCCCCGGGTC--
T ss_pred             ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC-CHHHHHHHHHHhcCCCChHHhhhh
Confidence            1   2234567999999999998875 5699999999999999999999999874 333333332110000         


Q ss_pred             -------------CC-------CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          222 -------------PE-------IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       222 -------------~~-------~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                   +.       +...+|+++++||.+||++||.+|||+.|+|+||||++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence                         00       112478999999999999999999999999999999864


No 11 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.2e-58  Score=439.91  Aligned_cols=245  Identities=23%  Similarity=0.360  Sum_probs=200.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      ++++++.||+|+||+||+|+++.   .+|||+++...     .+.+.+|+++|++++|||||++++++.. ..    ++|
T Consensus        37 ~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~----~~i  108 (307)
T 3omv_A           37 EVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN----LAI  108 (307)
T ss_dssp             SCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS----CEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-Ce----EEE
Confidence            46788999999999999998753   48999886432     3567899999999999999999997643 22    569


Q ss_pred             EEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      |||||+||+|.+++.. .+++++..+..++.||+.||+|||++|||||||||+||||+.++.  +||+|||+|+......
T Consensus       109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~--~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT--VKIGDFGLATVKSRWS  186 (307)
T ss_dssp             EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEE--EEECCCSSCBC-----
T ss_pred             EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCc--EEEeeccCceecccCC
Confidence            9999999999999974 567999999999999999999999999999999999999997766  9999999998754322


Q ss_pred             -CCCCCccccCCcccChhhhcCC---CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC---CCCCCCCCcC
Q 040569          156 -DDEGKPICGTPICMAPEVARGE---EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS---SDTPEIPGYM  228 (385)
Q Consensus       156 -~~~~~~~~Gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~---~~~~~~~~~~  228 (385)
                       .......+||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+..+.......+...   ...+.++..+
T Consensus       187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  266 (307)
T 3omv_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC  266 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred             cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence             2234566899999999999754   58889999999999999999999998876655444444322   2334566778


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      |+++.+|+.+||++||.+|||+.|++++
T Consensus       267 ~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          267 PKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             CHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999999999988654


No 12 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=5.8e-58  Score=447.44  Aligned_cols=253  Identities=26%  Similarity=0.350  Sum_probs=205.9

Q ss_pred             CceeeceeeccCceEEEEEEEC---CCCcEEEEEeccCC-CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN---RSSEVFAVKSAELS-NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~~AvK~~~~~-~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      .|++++.||+|+||+||+|+++   .+++.||+|.+... ....+.+|+++|+.+ .||||+++++++.....    +|+
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~----~~l   97 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH----VVI   97 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE----EEE
T ss_pred             cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE----EEE
Confidence            4999999999999999999875   46789999987644 456788999999998 79999999999876543    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      |||||+||+|.++++   .+++..++.+++||+.||+|||++||+||||||+|||++.+. ..+||+|||+|+.......
T Consensus        98 vmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~-~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A           98 AMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL-KKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             EEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT-TEEEECCCTTCEECTTCSC
T ss_pred             EEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC-CeEEECcCCCCcccCCccc
Confidence            999999999999985   499999999999999999999999999999999999998652 2389999999986532211


Q ss_pred             ---------------------------CCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCh
Q 040569          157 ---------------------------DEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADP  208 (385)
Q Consensus       157 ---------------------------~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~  208 (385)
                                                 ....+.+||+.|||||++.+. .|+.++||||+||++|||++|+.||....+.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~  253 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD  253 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence                                       122345899999999999875 5899999999999999999999999765554


Q ss_pred             HHHHHHhcC---------------------------------------CCCC-------------CCCCCcCCHHHHHHH
Q 040569          209 ISALHRIGF---------------------------------------SSDT-------------PEIPGYMSKQAQDFL  236 (385)
Q Consensus       209 ~~~~~~~~~---------------------------------------~~~~-------------~~~~~~~s~~~~~ll  236 (385)
                      ...+.++..                                       ....             ......+|++++|||
T Consensus       254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl  333 (361)
T 4f9c_A          254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL  333 (361)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence            444332210                                       0000             011235799999999


Q ss_pred             HHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          237 SKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .+||++||.+|||++|+|+||||++.
T Consensus       334 ~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          334 DKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             HHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHCcCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999864


No 13 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2.1e-58  Score=476.91  Aligned_cols=253  Identities=24%  Similarity=0.363  Sum_probs=215.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHH---HHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQRE---QRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E---~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      ||++++.||+|+||+||+|+++.+|+.||||++.+.      ....+.+|   +.+++.++|||||++++++.+...   
T Consensus       190 df~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~---  266 (689)
T 3v5w_A          190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK---  266 (689)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE---
T ss_pred             HeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE---
Confidence            699999999999999999999999999999998642      23344444   566677899999999999876654   


Q ss_pred             EEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           73 LYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                       +|||||||+||+|.++|.+.+.++|..++.|+.||+.||+|||++|||||||||+||||+.++.  +||+|||+|+...
T Consensus       267 -lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~--vKL~DFGlA~~~~  343 (689)
T 3v5w_A          267 -LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFS  343 (689)
T ss_dssp             -EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSC--EEECCCTTCEECS
T ss_pred             -EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCC--EEecccceeeecC
Confidence             7799999999999999998888999999999999999999999999999999999999998776  9999999998764


Q ss_pred             ccCCCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHhcCCCCCCCCCCcCC
Q 040569          153 VNEDDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVA--DPISALHRIGFSSDTPEIPGYMS  229 (385)
Q Consensus       153 ~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~--~~~~~~~~~~~~~~~~~~~~~~s  229 (385)
                      .   ....+.+|||.|||||++.+ ..|+.++|||||||++|||++|++||....  +.......+.  ...+.+|..+|
T Consensus       344 ~---~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~--~~~~~~p~~~S  418 (689)
T 3v5w_A          344 K---KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--TMAVELPDSFS  418 (689)
T ss_dssp             S---CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH--HCCCCCCTTSC
T ss_pred             C---CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc--CCCCCCCccCC
Confidence            2   23456799999999999964 579999999999999999999999997532  2333333321  23345677899


Q ss_pred             HHHHHHHHHhhhcCCCCCCC-----HHHHHhCccccccccc
Q 040569          230 KQAQDFLSKCLIRNPGERWS-----ASELLEHGFVKEQNFK  265 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps-----~~elL~hp~~~~~~~~  265 (385)
                      +++++||.+||++||.+|++     ++|+++||||+..++.
T Consensus       419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~  459 (689)
T 3v5w_A          419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQ  459 (689)
T ss_dssp             HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHH
T ss_pred             HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHH
Confidence            99999999999999999998     7999999999988654


No 14 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.1e-58  Score=441.24  Aligned_cols=250  Identities=22%  Similarity=0.359  Sum_probs=209.7

Q ss_pred             CceeeceeeccCceEEEEEEEC-----CCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-----RSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|++.     .++..||||++....   .+.+.+|+++|++|+|||||++++++.+...    
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~----   89 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP----   89 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS----
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE----
Confidence            5788999999999999999875     468899999997654   3567899999999999999999999876554    


Q ss_pred             EEEEEeecCCCCHHHHHHcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCe
Q 040569           74 YNLFLEYAPGGTLTDAIRSG-------------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGA  140 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~-------------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~  140 (385)
                      ++||||||+||+|.++|++.             ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.  +
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~--~  167 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL--V  167 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--E
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCc--E
Confidence            67999999999999999743             36999999999999999999999999999999999999988766  9


Q ss_pred             EEeecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCC
Q 040569          141 KIADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFS  218 (385)
Q Consensus       141 kL~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~  218 (385)
                      ||+|||+|+........ .....+||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ....+..+. .
T Consensus       168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~-~~~~~~~i~-~  245 (299)
T 4asz_A          168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-NNEVIECIT-Q  245 (299)
T ss_dssp             EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHHHH-H
T ss_pred             EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHH-c
Confidence            99999999865432221 2334579999999999999999999999999999999998 999998753 444444443 2


Q ss_pred             CCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          219 SDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       219 ~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      ...+..|..+|+++.+|+.+||++||++|||+.|++  ++++.
T Consensus       246 ~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~~  286 (299)
T 4asz_A          246 GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQN  286 (299)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHH
T ss_pred             CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHHH
Confidence            345667888999999999999999999999999995  35543


No 15 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=8.6e-58  Score=440.57  Aligned_cols=247  Identities=25%  Similarity=0.357  Sum_probs=202.7

Q ss_pred             CceeeceeeccCceEEEEEEEC-----CCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-----RSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      |+++.+.||+|+||+||+|+++     .+++.||||++....   .+.+.+|+++|++|+|||||++++++.....    
T Consensus        42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~----  117 (329)
T 4aoj_A           42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP----  117 (329)
T ss_dssp             GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS----
T ss_pred             HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE----
Confidence            4677899999999999999865     468999999997654   3568899999999999999999999876554    


Q ss_pred             EEEEEeecCCCCHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCC
Q 040569           74 YNLFLEYAPGGTLTDAIRSG---------------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQ  138 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~---------------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~  138 (385)
                      ++||||||+||+|.+++++.               +++++..+..++.||+.||+|||+++|+||||||+||||+.++. 
T Consensus       118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~-  196 (329)
T 4aoj_A          118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV-  196 (329)
T ss_dssp             EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE-
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc-
Confidence            67999999999999999742               35899999999999999999999999999999999999997766 


Q ss_pred             CeEEeecCceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhc
Q 040569          139 GAKIADFGCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIG  216 (385)
Q Consensus       139 ~~kL~DFG~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~  216 (385)
                       +||+|||+|+....... ......+||+.|||||++.+..++.++|||||||++|||+| |+.||.... ....+..+.
T Consensus       197 -~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-~~~~~~~i~  274 (329)
T 4aoj_A          197 -VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-NTEAIDCIT  274 (329)
T ss_dssp             -EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-HHHHHHHHH
T ss_pred             -EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC-HHHHHHHHH
Confidence             99999999987643322 22345679999999999999999999999999999999999 999998754 344444442


Q ss_pred             CCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          217 FSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       217 ~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                       ....+..|..+|+++.+|+.+||++||++|||+.|++++
T Consensus       275 -~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          275 -QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             -HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             -cCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence             234566778899999999999999999999999999874


No 16 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2.1e-57  Score=434.08  Aligned_cols=247  Identities=19%  Similarity=0.261  Sum_probs=209.7

Q ss_pred             CceeeceeeccCceEEEEEEEC-----CCCcEEEEEeccCC----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-----RSSEVFAVKSAELS----NSEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~~AvK~~~~~----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      ++++.+.||+|+||+||+|+..     .+++.||||.+...    ..+.+.+|+.+|++++|||||+++|++.....   
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~---  103 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP---  103 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS---
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE---
Confidence            3567899999999999999863     46789999998642    24678999999999999999999999876554   


Q ss_pred             EEEEEEeecCCCCHHHHHHcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC
Q 040569           73 LYNLFLEYAPGGTLTDAIRSG----------------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN  136 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~----------------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~  136 (385)
                       ++||||||++|+|.++|...                ..+++..+..++.||++||+|||+++||||||||+||||+.++
T Consensus       104 -~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          104 -LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             -CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             -EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCC
Confidence             66999999999999999632                3589999999999999999999999999999999999998876


Q ss_pred             CCCeEEeecCceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHH
Q 040569          137 EQGAKIADFGCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHR  214 (385)
Q Consensus       137 ~~~~kL~DFG~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~  214 (385)
                      .  +||+|||+|+....... ......+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.. ....+..
T Consensus       183 ~--~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-~~~~~~~  259 (308)
T 4gt4_A          183 N--VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-NQDVVEM  259 (308)
T ss_dssp             C--EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-HHHHHHH
T ss_pred             C--EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-HHHHHHH
Confidence            6  99999999987643322 23345689999999999999999999999999999999998 899998753 4444444


Q ss_pred             hcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          215 IGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       215 ~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      +. ....+..|..+|+++.+|+.+||+.||.+|||+.|++++
T Consensus       260 i~-~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          260 IR-NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HH-cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            43 344556778899999999999999999999999999874


No 17 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2.3e-57  Score=468.12  Aligned_cols=255  Identities=24%  Similarity=0.377  Sum_probs=220.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++++.||+|+||+||+|+++.+|+.||+|.+....   .+.+++|+++|+.|+|||||++++++.+...    +||||
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~----~~iv~  233 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE----MVMIY  233 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSE----EEEEE
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE----EEEEE
Confidence            5899999999999999999999999999999987654   3567899999999999999999999876543    67999


Q ss_pred             eecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           79 EYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        79 Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |||+||+|.++|. +.+.++|..++.|++||+.||+|||++||+||||||+|||++.+..+.+||+|||+|+....  ..
T Consensus       234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~--~~  311 (573)
T 3uto_A          234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--KQ  311 (573)
T ss_dssp             ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT--TS
T ss_pred             eecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC--CC
Confidence            9999999999997 45679999999999999999999999999999999999999876445599999999998742  22


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCC--CCCCCCcCCHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSD--TPEIPGYMSKQAQDF  235 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~l  235 (385)
                      .....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+. +....+..+.....  .+..+..+|+++++|
T Consensus       312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dl  390 (573)
T 3uto_A          312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDF  390 (573)
T ss_dssp             EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCCSGGGTTSCHHHHHH
T ss_pred             ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHhCCCCCCcccccCCCHHHHHH
Confidence            345668999999999999999999999999999999999999999874 44455555433221  223345689999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      |.+||++||.+|||+.|+|+||||+...
T Consensus       391 i~~~L~~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          391 IRKLLLADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred             HHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence            9999999999999999999999998654


No 18 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.2e-56  Score=436.28  Aligned_cols=249  Identities=25%  Similarity=0.341  Sum_probs=209.4

Q ss_pred             CceeeceeeccCceEEEEEEECCC-----CcEEEEEeccCCC----HHHHHHHHHHHHhcCC-CCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS-----SEVFAVKSAELSN----SEFLQREQRILSALAC-PQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~~AvK~~~~~~----~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~~   71 (385)
                      +|++++.||+|+||+||+|.++.+     ++.||||.+....    .+.+.+|+++|+++.| ||||++++++..... .
T Consensus        65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~-~  143 (353)
T 4ase_A           65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-P  143 (353)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-C
T ss_pred             HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC-E
Confidence            478899999999999999997654     3689999986543    3457899999999965 999999998765432 1


Q ss_pred             EEEEEEEeecCCCCHHHHHHc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC
Q 040569           72 ILYNLFLEYAPGGTLTDAIRS----------------GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD  135 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~----------------~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~  135 (385)
                        ++||||||++|+|.++|++                ...+++..+..++.||++||+|||+++||||||||+|||++.+
T Consensus       144 --~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~  221 (353)
T 4ase_A          144 --LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  221 (353)
T ss_dssp             --CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             --EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC
Confidence              5699999999999999974                2348999999999999999999999999999999999999887


Q ss_pred             CCCCeEEeecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHH
Q 040569          136 NEQGAKIADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALH  213 (385)
Q Consensus       136 ~~~~~kL~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~  213 (385)
                      +.  +||+|||+|+........ .....+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.........
T Consensus       222 ~~--vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~  299 (353)
T 4ase_A          222 NV--VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  299 (353)
T ss_dssp             GC--EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred             CC--EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            76  999999999876433221 2345679999999999999999999999999999999998 9999987654444333


Q ss_pred             HhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          214 RIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       214 ~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      .+ .....+..|..+++++.+||.+||++||.+|||+.|+++|
T Consensus       300 ~i-~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          300 RL-KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HH-HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HH-HcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            33 2344566788899999999999999999999999999987


No 19 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.5e-54  Score=413.86  Aligned_cols=250  Identities=24%  Similarity=0.239  Sum_probs=196.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHH--HHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQR--EQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~--E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|.+.+.||+|+||+||+|++  +|+.||||++.......+.+  |+..+.+++|||||++++++.........++||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            578899999999999999987  48999999998766554444  55555678999999999998876654445779999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSN--------GIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~--------givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      ||+||+|.++++.. .+++..+..++.|++.||+|||++        +|+||||||+||||+.++.  +||+|||+|+..
T Consensus        82 y~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~--~Ki~DFGla~~~  158 (303)
T 3hmm_A           82 YHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRH  158 (303)
T ss_dssp             CCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSC--EEECCCTTCEEE
T ss_pred             CCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCC--EEEEeCCCCccc
Confidence            99999999999865 489999999999999999999987        9999999999999988776  999999999876


Q ss_pred             cccCCC---CCCccccCCcccChhhhcCC------CCCCCCChHHHHHHHHHHHhCCCCCCCCC--------------Ch
Q 040569          152 RVNEDD---EGKPICGTPICMAPEVARGE------EQGFPADVWALGCTVLEMATGRPPWPDVA--------------DP  208 (385)
Q Consensus       152 ~~~~~~---~~~~~~Gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG~~Pf~~~~--------------~~  208 (385)
                      ......   .....+||+.|||||++.+.      .++.++|||||||++|||+||++||....              ..
T Consensus       159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~  238 (303)
T 3hmm_A          159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence            433221   22345799999999999764      36778999999999999999987664211              11


Q ss_pred             HHHHHHhcCCCCCCCCCCc-----CCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          209 ISALHRIGFSSDTPEIPGY-----MSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~-----~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ......+......|.+|..     .++.+.+|+.+||+.||.+|||+.|+++.
T Consensus       239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            2222223233334555543     23578899999999999999999999874


No 20 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.7e-53  Score=412.34  Aligned_cols=254  Identities=28%  Similarity=0.455  Sum_probs=220.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+|+.||+|.+..      ...+.+.+|..+|++++||||+++++++.....    ++
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~----~~   81 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR----LC   81 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSE----EE
T ss_pred             HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCE----EE
Confidence            68999999999999999999999999999998853      345678899999999999999999998876543    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++..... 
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~-  158 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISD-  158 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCCT-
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCC--EEEeeccchhhcccC-
Confidence            99999999999999998778999999999999999999999999999999999999987776  999999999864322 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                      .......+||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+..  ....+|..+|+++++|
T Consensus       159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~~l  235 (337)
T 1o6l_A          159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHERLFELILM--EEIRFPRTLSPEAKSL  235 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHHH
T ss_pred             CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC-CHHHHHHHHHc--CCCCCCCCCCHHHHHH
Confidence            22345678999999999999999999999999999999999999999764 33343333322  2345677899999999


Q ss_pred             HHHhhhcCCCCCC-----CHHHHHhCccccccccc
Q 040569          236 LSKCLIRNPGERW-----SASELLEHGFVKEQNFK  265 (385)
Q Consensus       236 l~~cL~~dP~~Rp-----s~~elL~hp~~~~~~~~  265 (385)
                      |.+||++||.+||     ++.|+++||||...++.
T Consensus       236 i~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~  270 (337)
T 1o6l_A          236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ  270 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHH
Confidence            9999999999999     99999999999987553


No 21 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=3.8e-53  Score=408.33  Aligned_cols=250  Identities=29%  Similarity=0.470  Sum_probs=216.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--C---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--N---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|++..+|+.||||++...  .   .+.+.+|+++|+.++||||+++++++.....    +++
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----~~l   91 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKT----LYL   91 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EEE
T ss_pred             CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE----EEE
Confidence            699999999999999999999999999999988643  1   3457789999999999999999998765443    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      ||||++||+|.+++...+++++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....  
T Consensus        92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~--  167 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN--IKIADFGFSNEFTVG--  167 (328)
T ss_dssp             EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECSTTCCGGGSSS--
T ss_pred             EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCC--EEEeeccCceecCCC--
Confidence            9999999999999987778999999999999999999999999999999999999987766  999999999765322  


Q ss_pred             CCCCccccCCcccChhhhcCCCCC-CCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          157 DEGKPICGTPICMAPEVARGEEQG-FPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                      ......+||+.|+|||++.+..+. .++|||||||++|+|++|+.||... +.......+..  ....+|..+|+++.+|
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~~l  244 (328)
T 3fe3_A          168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLR--GKYRIPFYMSTDCENL  244 (328)
T ss_dssp             CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHHH
T ss_pred             CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHh--CCCCCCCCCCHHHHHH
Confidence            233456899999999999988775 7899999999999999999999874 34444444322  2345667789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||..||.+|||++|+|+||||+..
T Consensus       245 i~~~L~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          245 LKRFLVLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             HHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred             HHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence            999999999999999999999999864


No 22 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=6.9e-53  Score=400.31  Aligned_cols=253  Identities=32%  Similarity=0.543  Sum_probs=217.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC---CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL---SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++.+.||+|+||+||+|++..+++.||+|.+..   ...+.+.+|+.++++++||||+++++++.....    +++||
T Consensus        21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----~~lv~   96 (297)
T 3fxz_A           21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE----LWVVM   96 (297)
T ss_dssp             TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----EEEEE
T ss_pred             ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCE----EEEEE
Confidence            59999999999999999999999999999998753   346778899999999999999999998876543    67999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      ||++||+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++........ .
T Consensus        97 e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~-~  172 (297)
T 3fxz_A           97 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQS-K  172 (297)
T ss_dssp             ECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSTTC-C
T ss_pred             ECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCC--EEEeeCCCceecCCccc-c
Confidence            999999999999865 5999999999999999999999999999999999999987766  99999999987643322 2


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLSK  238 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~  238 (385)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||......................+..+++.+++||.+
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  252 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  252 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHH
T ss_pred             cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHH
Confidence            34567999999999999999999999999999999999999999875333222222222223334466789999999999


Q ss_pred             hhhcCCCCCCCHHHHHhCcccccc
Q 040569          239 CLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       239 cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||+.||.+|||+.|+|+||||+..
T Consensus       253 ~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          253 CLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HccCChhHCcCHHHHhhChhhccc
Confidence            999999999999999999999753


No 23 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.9e-53  Score=414.56  Aligned_cols=254  Identities=26%  Similarity=0.458  Sum_probs=216.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++..      ...+.+.+|..+|+.+ +||||+++++++.....    +
T Consensus        24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~----~   99 (353)
T 3txo_A           24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR----L   99 (353)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE----E
T ss_pred             heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE----E
Confidence            69999999999999999999999999999998864      2346678899999998 79999999998866543    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus       100 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~--ikL~DFG~a~~~~~~  177 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH--CKLADFGMCKEGICN  177 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCSCC-
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCC--EEEccccceeecccC
Confidence            799999999999999998788999999999999999999999999999999999999987766  999999999864222


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       .......+||+.|||||++.+..++.++|||||||++|||++|+.||... +.......+..  ....+|..+++++++
T Consensus       178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~--~~~~~p~~~~~~~~~  253 (353)
T 3txo_A          178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-NEDDLFEAILN--DEVVYPTWLHEDATG  253 (353)
T ss_dssp             ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-CHHHHHHHHHc--CCCCCCCCCCHHHHH
Confidence             22345668999999999999999999999999999999999999999874 44444444422  234567779999999


Q ss_pred             HHHHhhhcCCCCCCCH------HHHHhCccccccccc
Q 040569          235 FLSKCLIRNPGERWSA------SELLEHGFVKEQNFK  265 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~------~elL~hp~~~~~~~~  265 (385)
                      ||.+||++||.+||++      .|+++||||+..++.
T Consensus       254 li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~  290 (353)
T 3txo_A          254 ILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWA  290 (353)
T ss_dssp             HHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHH
T ss_pred             HHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHH
Confidence            9999999999999998      899999999987653


No 24 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.8e-53  Score=413.74  Aligned_cols=252  Identities=27%  Similarity=0.426  Sum_probs=209.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|+++.+|+.||||++....    .+.+.+|+++|++++||||+++++++.....    +++|
T Consensus        11 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~----~~lv   86 (347)
T 3zgw_A           11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANK----IFMV   86 (347)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EEEE
T ss_pred             CeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE----EEEE
Confidence            5899999999999999999999999999999986543    3467899999999999999999998765443    6799


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||++.........
T Consensus        87 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~--~kL~DFG~a~~~~~~~~~  164 (347)
T 3zgw_A           87 LEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHK--LKLIDFGLCAKPKGNKDY  164 (347)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBC-------
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCC--EEEEeccCcccccCCCCc
Confidence            999999999999987778999999999999999999999999999999999999987666  999999999876444333


Q ss_pred             CCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFL  236 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  236 (385)
                      .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||... +.......+..  ....+|..+++++.+||
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~~li  241 (347)
T 3zgw_A          165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-NVMALYKKIMR--GKYDVPKWLSPSSILLL  241 (347)
T ss_dssp             -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--TCCCCCTTCCHHHHHHH
T ss_pred             cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHc--CCCCCCCCCCHHHHHHH
Confidence            4456789999999999998876 88999999999999999999999864 44444444322  23456777999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          237 SKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .+||++||.+|||+.|+++||||...
T Consensus       242 ~~~L~~dP~~Rps~~eil~hp~~~~~  267 (347)
T 3zgw_A          242 QQMLQVDPKKRISMKNLLNHPWIMQD  267 (347)
T ss_dssp             HHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred             HHHcccCHhHCcCHHHHhcCcchhcC
Confidence            99999999999999999999999764


No 25 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=8.1e-53  Score=411.34  Aligned_cols=255  Identities=28%  Similarity=0.416  Sum_probs=217.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---------SEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|+++.+|+.||+|.+....         .+.+.+|+.+|+++.||||+++++++.....   
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---   89 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD---   89 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE---
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE---
Confidence            4899999999999999999999999999999886432         4678899999999999999999998765433   


Q ss_pred             EEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC--CCeEEeecCceee
Q 040569           73 LYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE--QGAKIADFGCARR  150 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~--~~~kL~DFG~a~~  150 (385)
                       +++||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  ..+||+|||+++.
T Consensus        90 -~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           90 -VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             -EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             -EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence             6799999999999999998888999999999999999999999999999999999999976652  1489999999987


Q ss_pred             ecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCC--CCCCCCcC
Q 040569          151 ARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSD--TPEIPGYM  228 (385)
Q Consensus       151 ~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~  228 (385)
                      ....  ......+||+.|+|||++.+..++.++|||||||++|+|++|..||... +....+..+.....  .+..+..+
T Consensus       169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~  245 (361)
T 2yab_A          169 IEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANITAVSYDFDEEFFSQT  245 (361)
T ss_dssp             CCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCCHHHHTTS
T ss_pred             cCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCchhccCC
Confidence            6432  2334567999999999999999999999999999999999999999774 34444444322211  11223568


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      |+++++||.+||.+||.+|||+.|+|+||||....
T Consensus       246 s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence            99999999999999999999999999999998653


No 26 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=6.8e-53  Score=416.54  Aligned_cols=255  Identities=29%  Similarity=0.524  Sum_probs=217.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|++.+.      ..+.+.+|..+|+++ +||||+++++++.....    +
T Consensus        53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~----~  128 (396)
T 4dc2_A           53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR----L  128 (396)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE----E
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE----E
Confidence            589999999999999999999999999999988642      124577899999987 89999999998876543    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.... 
T Consensus       129 ~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~--ikL~DFGla~~~~~-  205 (396)
T 4dc2_A          129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLR-  205 (396)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCC-
T ss_pred             EEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCC--EEEeecceeeeccc-
Confidence            799999999999999998778999999999999999999999999999999999999988776  99999999986322 


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-------hHH-HHHHhcCCCCCCCCCC
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD-------PIS-ALHRIGFSSDTPEIPG  226 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-------~~~-~~~~~~~~~~~~~~~~  226 (385)
                      ........+||+.|||||++.+..++.++|||||||++|||++|+.||.....       ... ....+.  .....+|.
T Consensus       206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~--~~~~~~p~  283 (396)
T 4dc2_A          206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--EKQIRIPR  283 (396)
T ss_dssp             TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHH--HCCCCCCT
T ss_pred             CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHh--ccccCCCC
Confidence            22334567899999999999999999999999999999999999999964311       111 222221  23445677


Q ss_pred             cCCHHHHHHHHHhhhcCCCCCCCH------HHHHhCccccccccc
Q 040569          227 YMSKQAQDFLSKCLIRNPGERWSA------SELLEHGFVKEQNFK  265 (385)
Q Consensus       227 ~~s~~~~~ll~~cL~~dP~~Rps~------~elL~hp~~~~~~~~  265 (385)
                      .+|+++++||.+||++||.+||++      +|+++||||+..++.
T Consensus       284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~  328 (396)
T 4dc2_A          284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD  328 (396)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHH
T ss_pred             cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHH
Confidence            899999999999999999999985      799999999987654


No 27 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-52  Score=400.94  Aligned_cols=251  Identities=27%  Similarity=0.443  Sum_probs=219.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||+|.+..      ...+.+.+|..+|+.+.||||+++++++.....    ++
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~----~~   82 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ----IF   82 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSE----EE
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCE----EE
Confidence            68999999999999999999999999999998853      345678899999999999999999998865443    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....  
T Consensus        83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--~kL~Dfg~a~~~~~--  158 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH--IKITDFGFAKYVPD--  158 (318)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC--EEECCCSSCEECSS--
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCC--EEEeecCcceecCC--
Confidence            99999999999999998888999999999999999999999999999999999999987766  99999999987532  


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                        .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+..  ....+|..+++++++|
T Consensus       159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i~~--~~~~~p~~~~~~~~~l  233 (318)
T 1fot_A          159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILN--AELRFPPFFNEDVKDL  233 (318)
T ss_dssp             --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHHH
T ss_pred             --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHh--CCCCCCCCCCHHHHHH
Confidence              234568999999999999999999999999999999999999999764 34444444322  2345667799999999


Q ss_pred             HHHhhhcCCCCCC-----CHHHHHhCccccccccc
Q 040569          236 LSKCLIRNPGERW-----SASELLEHGFVKEQNFK  265 (385)
Q Consensus       236 l~~cL~~dP~~Rp-----s~~elL~hp~~~~~~~~  265 (385)
                      |.+||.+||.+||     +++++++||||+..++.
T Consensus       234 i~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~  268 (318)
T 1fot_A          234 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWE  268 (318)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred             HHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHH
Confidence            9999999999999     89999999999977543


No 28 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=7.9e-53  Score=408.96  Aligned_cols=254  Identities=31%  Similarity=0.541  Sum_probs=220.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|+++.+++.||+|.+..      ...+.+.+|..+|+.+ +||||+++++++.....    +
T Consensus        18 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~----~   93 (345)
T 1xjd_A           18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN----L   93 (345)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE----E
T ss_pred             HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE----E
Confidence            69999999999999999999999999999998864      3456778899999987 99999999998866543    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~  171 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLG  171 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCT
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCC--EEEeEChhhhhcccC
Confidence            799999999999999997778999999999999999999999999999999999999987766  999999999864322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+..  ..+.+|..+|+++++
T Consensus       172 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~~  247 (345)
T 1xjd_A          172 -DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-DEEELFHSIRM--DNPFYPRWLEKEAKD  247 (345)
T ss_dssp             -TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             -CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHh--CCCCCCcccCHHHHH
Confidence             22345668999999999999999999999999999999999999999764 44444444432  235567789999999


Q ss_pred             HHHHhhhcCCCCCCCHH-HHHhCccccccccc
Q 040569          235 FLSKCLIRNPGERWSAS-ELLEHGFVKEQNFK  265 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~-elL~hp~~~~~~~~  265 (385)
                      ||.+||++||.+||++. ++++||||+..++.
T Consensus       248 li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w~  279 (345)
T 1xjd_A          248 LLVKLFVREPEKRLGVRGDIRQHPLFREINWE  279 (345)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHH
T ss_pred             HHHHHhcCCHhHcCCChHHHHcCccccCCCHH
Confidence            99999999999999998 99999999987653


No 29 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=8.6e-53  Score=417.72  Aligned_cols=256  Identities=26%  Similarity=0.400  Sum_probs=215.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|++.+      ...+.+.+|..+|+.++||||+++++++.+...    ++
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~----~~  145 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY----LY  145 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE----EE
T ss_pred             ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE----EE
Confidence            58999999999999999999999999999998854      233457789999999999999999998875443    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++||+|.++++.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+|+......
T Consensus       146 lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~--ikL~DFG~a~~~~~~~  222 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMNKEG  222 (410)
T ss_dssp             EEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTTS
T ss_pred             EEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCC--EEEeccceeEeeccCC
Confidence            999999999999999865 5999999999999999999999999999999999999987776  9999999998764333


Q ss_pred             CCCCCccccCCcccChhhhcCCC----CCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCC--CCcCC
Q 040569          156 DDEGKPICGTPICMAPEVARGEE----QGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEI--PGYMS  229 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~s  229 (385)
                      .......+||+.|||||++.+..    ++.++|||||||++|||++|+.||... +.......+........+  ...+|
T Consensus       223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s  301 (410)
T 3v8s_A          223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDIS  301 (410)
T ss_dssp             EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCTTCCCC
T ss_pred             cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-ChhhHHHHHHhccccccCCCccccc
Confidence            22344678999999999998765    789999999999999999999999864 444444443221111112  23589


Q ss_pred             HHHHHHHHHhhhcCCCC--CCCHHHHHhCccccccccc
Q 040569          230 KQAQDFLSKCLIRNPGE--RWSASELLEHGFVKEQNFK  265 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~--Rps~~elL~hp~~~~~~~~  265 (385)
                      +++++||.+||..+|.+  ||+++|+++||||+..++.
T Consensus       302 ~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          302 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             HHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence            99999999999999988  9999999999999987543


No 30 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1e-52  Score=420.30  Aligned_cols=257  Identities=22%  Similarity=0.331  Sum_probs=218.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|++.+.      ..+.+.+|..+|..++||||+++++++.....    ++
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~----~~  150 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN----LY  150 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE----EE
T ss_pred             heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE----EE
Confidence            589999999999999999999999999999988642      22347889999999999999999998866543    67


Q ss_pred             EEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           76 LFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      +||||++||+|.+++.+ .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+|+.....
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~--vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH--IRLADFGSCLKLMED  228 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCC--EEEcchhhhhhcccC
Confidence            99999999999999986 578999999999999999999999999999999999999987776  999999999876443


Q ss_pred             CCCCCCccccCCcccChhhhc-----CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC---CCCCCCCCC
Q 040569          155 EDDEGKPICGTPICMAPEVAR-----GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF---SSDTPEIPG  226 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~  226 (385)
                      ........+||+.|||||++.     ...++.++|||||||++|||++|+.||... +.......+..   ....|....
T Consensus       229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~  307 (437)
T 4aw2_A          229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKERFQFPTQVT  307 (437)
T ss_dssp             SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCSSCC
T ss_pred             CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-ChhHHHHhhhhccccccCCcccc
Confidence            333344568999999999997     567899999999999999999999999864 34443333321   123344445


Q ss_pred             cCCHHHHHHHHHhhhcCCCC--CCCHHHHHhCccccccccc
Q 040569          227 YMSKQAQDFLSKCLIRNPGE--RWSASELLEHGFVKEQNFK  265 (385)
Q Consensus       227 ~~s~~~~~ll~~cL~~dP~~--Rps~~elL~hp~~~~~~~~  265 (385)
                      .+|+++++||++||..+|++  |++++|+++||||+..++.
T Consensus       308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~  348 (437)
T 4aw2_A          308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWD  348 (437)
T ss_dssp             CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTT
T ss_pred             cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHH
Confidence            58999999999999988888  9999999999999987654


No 31 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=4.3e-52  Score=409.34  Aligned_cols=253  Identities=25%  Similarity=0.406  Sum_probs=218.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|.+..      .....+.+|+++|++++||||+++++++.....    ++
T Consensus        16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~----~~   91 (384)
T 4fr4_A           16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED----MF   91 (384)
T ss_dssp             GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EE
T ss_pred             HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE----EE
Confidence            58999999999999999999999999999998753      345678899999999999999999998876543    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++....  
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~--  167 (384)
T 4fr4_A           92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH--VHITDFNIAAMLPR--  167 (384)
T ss_dssp             EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCT--
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCC--EEEeccceeeeccC--
Confidence            99999999999999998888999999999999999999999999999999999999987766  99999999987632  


Q ss_pred             CCCCCccccCCcccChhhhcC---CCCCCCCChHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          156 DDEGKPICGTPICMAPEVARG---EEQGFPADVWALGCTVLEMATGRPPWPDVA--DPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltG~~Pf~~~~--~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      .......+||+.|+|||++.+   ..++.++|||||||++|+|++|+.||....  ........+  ......+|..+|+
T Consensus       168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~p~~~s~  245 (384)
T 4fr4_A          168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF--ETTVVTYPSAWSQ  245 (384)
T ss_dssp             TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH--HHCCCCCCTTSCH
T ss_pred             CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH--hhcccCCCCcCCH
Confidence            233456789999999999974   458999999999999999999999997532  222222322  2234456777999


Q ss_pred             HHHHHHHHhhhcCCCCCCC-HHHHHhCcccccccc
Q 040569          231 QAQDFLSKCLIRNPGERWS-ASELLEHGFVKEQNF  264 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps-~~elL~hp~~~~~~~  264 (385)
                      ++.+||.+||++||.+||+ ++++++||||...++
T Consensus       246 ~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w  280 (384)
T 4fr4_A          246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINW  280 (384)
T ss_dssp             HHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence            9999999999999999998 899999999998754


No 32 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=3.4e-52  Score=404.39  Aligned_cols=254  Identities=29%  Similarity=0.519  Sum_probs=216.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---C---HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---N---SEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~---~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|++.+.   .   .+.+.+|..+|+++ +||||+++++++.....    +
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~----~   85 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR----L   85 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE----E
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE----E
Confidence            589999999999999999999999999999998643   2   24577899999998 89999999998866443    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus        86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--~kL~DFG~a~~~~~~  163 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRP  163 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCGGGCBCSCCT
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC--EEEEeccccccccCC
Confidence            799999999999999997778999999999999999999999999999999999999987766  999999999864222


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--------ChHHHHHHhcCCCCCCCCCC
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA--------DPISALHRIGFSSDTPEIPG  226 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~--------~~~~~~~~~~~~~~~~~~~~  226 (385)
                       .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....        ........+.  .....+|.
T Consensus       164 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~--~~~~~~p~  240 (345)
T 3a8x_A          164 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--EKQIRIPR  240 (345)
T ss_dssp             -TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHH--HCCCCCCT
T ss_pred             -CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHH--cCCCCCCC
Confidence             223455689999999999999999999999999999999999999996421        1112222221  12345677


Q ss_pred             cCCHHHHHHHHHhhhcCCCCCCCH------HHHHhCcccccccc
Q 040569          227 YMSKQAQDFLSKCLIRNPGERWSA------SELLEHGFVKEQNF  264 (385)
Q Consensus       227 ~~s~~~~~ll~~cL~~dP~~Rps~------~elL~hp~~~~~~~  264 (385)
                      .+|+++++||.+||++||.+||++      .|+++||||+..++
T Consensus       241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w  284 (345)
T 3a8x_A          241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  284 (345)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCH
T ss_pred             CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCH
Confidence            899999999999999999999995      89999999998764


No 33 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=5.1e-52  Score=404.01  Aligned_cols=250  Identities=27%  Similarity=0.456  Sum_probs=219.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+|+.||+|.+..      ...+.+.+|+++|++++||||+++++++.....    ++
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----~~  117 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN----LY  117 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EE
T ss_pred             HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE----EE
Confidence            58999999999999999999999999999998853      345678899999999999999999998765443    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....  
T Consensus       118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~--~kL~DFg~a~~~~~--  193 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKG--  193 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECSS--
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCC--EEEcccccceeccC--
Confidence            99999999999999997778999999999999999999999999999999999999987766  99999999987632  


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                        .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+...  ...+|..+++++++|
T Consensus       194 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~--~~~~p~~~~~~~~~l  268 (350)
T 1rdq_E          194 --RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-QPIQIYEKIVSG--KVRFPSHFSSDLKDL  268 (350)
T ss_dssp             --CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHC--CCCCCTTCCHHHHHH
T ss_pred             --CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-CHHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence              234568999999999999999999999999999999999999999764 444444444222  345677799999999


Q ss_pred             HHHhhhcCCCCCCC-----HHHHHhCcccccccc
Q 040569          236 LSKCLIRNPGERWS-----ASELLEHGFVKEQNF  264 (385)
Q Consensus       236 l~~cL~~dP~~Rps-----~~elL~hp~~~~~~~  264 (385)
                      |.+||++||.+||+     ++|+++||||...++
T Consensus       269 i~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             HHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence            99999999999998     999999999998765


No 34 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2e-52  Score=402.11  Aligned_cols=255  Identities=28%  Similarity=0.449  Sum_probs=215.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+....    .+.+.+|+.+++.++||||+++++++.....    .++|
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----~~lv   83 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI----QYLF   83 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSE----EEEE
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe----EEEE
Confidence            6999999999999999999999999999999986433    3567899999999999999999998765432    6699


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC-
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED-  156 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~-  156 (385)
                      |||++||+|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....... 
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECEETTEE
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCC--EEEEEeeccceeccCCcc
Confidence            999999999999998878999999999999999999999999999999999999987766  99999999986543221 


Q ss_pred             CCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          157 DEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                      ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.........................+++.+.+|
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL  241 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence            22345679999999999988775 77899999999999999999999865544333333322222223345689999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||+.||.+|||+.|+|+||||+..
T Consensus       242 i~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          242 LHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHccCChhhCcCHHHHhhChhhccc
Confidence            999999999999999999999999864


No 35 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=5.8e-52  Score=404.08  Aligned_cols=254  Identities=26%  Similarity=0.437  Sum_probs=219.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|++..      ...+.+.+|..+|..+ .||||+++++++.....    +
T Consensus        21 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~----~   96 (353)
T 2i0e_A           21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR----L   96 (353)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE----E
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE----E
Confidence            69999999999999999999999999999998864      3456778999999988 89999999998866443    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus        97 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~--vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC--EEECCCTTCBCCCCT
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCc--EEEEeCCcccccccC
Confidence            799999999999999997778999999999999999999999999999999999999987766  999999999864322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       .......+||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+..  ....+|..+|+++++
T Consensus       175 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~~  250 (353)
T 2i0e_A          175 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIME--HNVAYPKSMSKEAVA  250 (353)
T ss_dssp             -TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             -CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-CHHHHHHHHHh--CCCCCCCCCCHHHHH
Confidence             22345668999999999999999999999999999999999999999764 44444444422  234567789999999


Q ss_pred             HHHHhhhcCCCCCCC-----HHHHHhCccccccccc
Q 040569          235 FLSKCLIRNPGERWS-----ASELLEHGFVKEQNFK  265 (385)
Q Consensus       235 ll~~cL~~dP~~Rps-----~~elL~hp~~~~~~~~  265 (385)
                      ||.+||.+||.+||+     +.++++||||+..++.
T Consensus       251 li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~  286 (353)
T 2i0e_A          251 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE  286 (353)
T ss_dssp             HHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHH
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHH
Confidence            999999999999994     6999999999987553


No 36 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-51  Score=396.58  Aligned_cols=254  Identities=28%  Similarity=0.438  Sum_probs=215.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---------NSEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      .|++++.||+|+||+||+|+++.+++.||+|.+...         ..+.+.+|+.+|++++||||+++++++.....   
T Consensus        12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---   88 (326)
T 2y0a_A           12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD---   88 (326)
T ss_dssp             HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE---
T ss_pred             ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE---
Confidence            388999999999999999999999999999988643         25678899999999999999999998765433   


Q ss_pred             EEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC--CCeEEeecCceee
Q 040569           73 LYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE--QGAKIADFGCARR  150 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~--~~~kL~DFG~a~~  150 (385)
                       +++||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  ..+||+|||+++.
T Consensus        89 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           89 -VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             -EEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             -EEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence             6799999999999999998888999999999999999999999999999999999999987651  2489999999987


Q ss_pred             ecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC--CCCCCCCcC
Q 040569          151 ARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS--DTPEIPGYM  228 (385)
Q Consensus       151 ~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~  228 (385)
                      ....  ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ....+..+....  .....+..+
T Consensus       168 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~  244 (326)
T 2y0a_A          168 IDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVSAVNYEFEDEYFSNT  244 (326)
T ss_dssp             CCTT--SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHHTCCCCCHHHHTTS
T ss_pred             CCCC--CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHHhcCCCcCccccccC
Confidence            6432  22345679999999999999999999999999999999999999997643 333333322111  111223457


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |+.+++||.+||.+||.+|||+.|+|+||||+..
T Consensus       245 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence            9999999999999999999999999999999754


No 37 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2e-51  Score=388.27  Aligned_cols=253  Identities=26%  Similarity=0.358  Sum_probs=208.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|.+....     ...+.+|+.++++++||||+++++++.....    +++
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~l   78 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK----LTL   78 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE----EEE
T ss_pred             CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCE----EEE
Confidence            6999999999999999999999999999999886432     3567899999999999999999999876543    679


Q ss_pred             EEeecCCCCHHHHH-HcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAI-RSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l-~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||+++ +|.+.+ ...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++..... 
T Consensus        79 v~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~-  154 (292)
T 3o0g_A           79 VFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE--LKLANFGLARAFGIP-  154 (292)
T ss_dssp             EEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCSC-
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeecccceecCCc-
Confidence            9999987 555555 45678999999999999999999999999999999999999987766  999999999876422 


Q ss_pred             CCCCCccccCCcccChhhhcCCC-CCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC---C-------------
Q 040569          156 DDEGKPICGTPICMAPEVARGEE-QGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF---S-------------  218 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~---~-------------  218 (385)
                      ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||....+....+..+..   .             
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (292)
T 3o0g_A          155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence            22334557899999999998766 799999999999999999988886544454444433210   0             


Q ss_pred             -----------CCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          219 -----------SDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       219 -----------~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                 .........+++++++||.+||+.||.+|||++|+|+||||++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence                       00111223578999999999999999999999999999999753


No 38 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.1e-52  Score=398.98  Aligned_cols=254  Identities=26%  Similarity=0.372  Sum_probs=215.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|.++.+++.+|+|.+....  .+.+++|+.+|+.++||||+++++++.....    +++|||
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----~~lv~e   81 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEE----LVMIFE   81 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTE----EEEEEC
T ss_pred             ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCE----EEEEEE
Confidence            6999999999999999999999999999999987654  3467899999999999999999999866543    679999


Q ss_pred             ecCCCCHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           80 YAPGGTLTDAIRSG-TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        80 y~~ggsL~~~l~~~-~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      |++||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+....+||+|||+++.....  ..
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--~~  159 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DN  159 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--CE
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--Cc
Confidence            99999999999854 4799999999999999999999999999999999999998744455999999999876422  22


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCC--CCCCCcCCHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDT--PEIPGYMSKQAQDFL  236 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~ll  236 (385)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|..||.... ....+..+......  +.....+|+++++||
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  238 (321)
T 1tki_A          160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-NQQIIENIMNAEYTFDEEAFKEISIEAMDFV  238 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHH
T ss_pred             cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-HHHHHHHHHcCCCCCChhhhccCCHHHHHHH
Confidence            344579999999999999989999999999999999999999997743 33333333221111  111235899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          237 SKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .+||.+||.+|||+.|+|+||||++.
T Consensus       239 ~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          239 DRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHcCCChhHCcCHHHHhcChhhccC
Confidence            99999999999999999999999754


No 39 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2.3e-51  Score=411.55  Aligned_cols=255  Identities=25%  Similarity=0.382  Sum_probs=213.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|.++.+|+.+|+|.+....     .+.+.+|+.+|++++||||+++++++.....    +++
T Consensus        12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~----~~l   87 (444)
T 3soa_A           12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGH----HYL   87 (444)
T ss_dssp             HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE----EEE
T ss_pred             CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE----EEE
Confidence            4899999999999999999999999999999987543     3467899999999999999999998765443    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||++||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.+. ...+||+|||+++..... 
T Consensus        88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~-  166 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE-  166 (444)
T ss_dssp             EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT-
T ss_pred             EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC-
Confidence            999999999999999888899999999999999999999999999999999999998542 234899999999876432 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC--CCCCCCCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS--DTPEIPGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~  233 (385)
                      .......+||+.|+|||++.+..++.++|||||||++|+|++|++||... +.......+....  ........+|++++
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  245 (444)
T 3soa_A          167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE-DQHRLYQQIKAGAYDFPSPEWDTVTPEAK  245 (444)
T ss_dssp             CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred             CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc-cHHHHHHHHHhCCCCCCccccccCCHHHH
Confidence            22234567999999999999999999999999999999999999999764 3334333332221  11122245899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||.+||++||.+|||+.|+|+|||+...
T Consensus       246 ~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          246 DLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             HHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            99999999999999999999999999754


No 40 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.1e-51  Score=402.95  Aligned_cols=255  Identities=27%  Similarity=0.389  Sum_probs=205.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....  .+.+++|+.++++++||||+++++++.....    +++|||
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~lv~e   96 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTH----LAIIME   96 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EEEEEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCE----EEEEEE
Confidence            5999999999999999999999999999999987543  4678899999999999999999999876543    679999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCCC
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDEG  159 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~  159 (385)
                      |++||+|.+++...+++++..++.++.||+.||+|||++||+||||||+|||++.++...+||+|||+++.....  ...
T Consensus        97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--~~~  174 (361)
T 3uc3_A           97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQP  174 (361)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--CCC
Confidence            999999999998777899999999999999999999999999999999999998766656999999999854222  223


Q ss_pred             CccccCCcccChhhhcCCCCCCC-CChHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          160 KPICGTPICMAPEVARGEEQGFP-ADVWALGCTVLEMATGRPPWPDVAD---PISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       160 ~~~~Gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltG~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                      ...+||+.|+|||++.+..+..+ +|||||||++|+|++|+.||.....   ....+..+............+++++++|
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  254 (361)
T 3uc3_A          175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHL  254 (361)
T ss_dssp             ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHH
T ss_pred             CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHH
Confidence            44579999999999988877655 8999999999999999999976432   2233333322222222233579999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||++||.+|||+.|+|+||||...
T Consensus       255 i~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          255 ISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             HHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             HHHHccCChhHCcCHHHHHhCcchhcC
Confidence            999999999999999999999999653


No 41 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.9e-52  Score=411.92  Aligned_cols=256  Identities=24%  Similarity=0.365  Sum_probs=214.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------SEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|++.+..      .+.+.+|..+|..++||||+++++++.+...    +|
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~----~~  137 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY----LY  137 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE----EE
T ss_pred             hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE----EE
Confidence            5899999999999999999999999999999986422      2347789999999999999999998876543    67


Q ss_pred             EEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           76 LFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      +||||++||+|.+++.+ +..+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~--vkL~DFGla~~~~~~  215 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH--IRLADFGSCLKLRAD  215 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECCTT
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCC--EEEeechhheeccCC
Confidence            99999999999999985 457999999999999999999999999999999999999987766  999999999876543


Q ss_pred             CCCCCCccccCCcccChhhhc-------CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC---CCCCCCC
Q 040569          155 EDDEGKPICGTPICMAPEVAR-------GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF---SSDTPEI  224 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~  224 (385)
                      ........+||+.|||||++.       +..++.++|||||||++|||++|+.||... +......++..   ....|..
T Consensus       216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~  294 (412)
T 2vd5_A          216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD-STAETYGKIVHYKEHLSLPLV  294 (412)
T ss_dssp             SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCC--
T ss_pred             CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC-CHHHHHHHHHhcccCcCCCcc
Confidence            332334568999999999997       457899999999999999999999999764 33333333321   1233444


Q ss_pred             CCcCCHHHHHHHHHhhhcCCCCC---CCHHHHHhCccccccccc
Q 040569          225 PGYMSKQAQDFLSKCLIRNPGER---WSASELLEHGFVKEQNFK  265 (385)
Q Consensus       225 ~~~~s~~~~~ll~~cL~~dP~~R---ps~~elL~hp~~~~~~~~  265 (385)
                      +..+|+++++||.+||. +|.+|   ++++|+++||||+..++.
T Consensus       295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~  337 (412)
T 2vd5_A          295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWD  337 (412)
T ss_dssp             --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCST
T ss_pred             ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHH
Confidence            56799999999999999 99998   599999999999987664


No 42 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.7e-51  Score=396.02  Aligned_cols=253  Identities=26%  Similarity=0.405  Sum_probs=208.9

Q ss_pred             CceeeceeeccCceEEEEEEEC---CCCcEEEEEeccCCC-------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN---RSSEVFAVKSAELSN-------SEFLQREQRILSALACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~~AvK~~~~~~-------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++.+.||+|+||+||+|++.   .+++.||+|++....       ...+.+|+.+|++++||||+++++++.....  
T Consensus        18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--   95 (327)
T 3a62_A           18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK--   95 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC--
T ss_pred             HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE--
Confidence            5899999999999999999985   689999999986532       3456789999999999999999998876544  


Q ss_pred             EEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                        +++||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus        96 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~~~~~  171 (327)
T 3a62_A           96 --LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCKES  171 (327)
T ss_dssp             --EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSC--EEECCCSCC---
T ss_pred             --EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCc--EEEEeCCccccc
Confidence              6799999999999999997778999999999999999999999999999999999999987766  999999999864


Q ss_pred             cccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHH
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQ  231 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  231 (385)
                      .... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+..  ....+|..++++
T Consensus       172 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~~--~~~~~p~~~~~~  247 (327)
T 3a62_A          172 IHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE-NRKKTIDKILK--CKLNLPPYLTQE  247 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHH--TCCCCCTTSCHH
T ss_pred             ccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHh--CCCCCCCCCCHH
Confidence            3221 2234567999999999999999999999999999999999999999864 33333333321  233456678999


Q ss_pred             HHHHHHHhhhcCCCCCC-----CHHHHHhCcccccccc
Q 040569          232 AQDFLSKCLIRNPGERW-----SASELLEHGFVKEQNF  264 (385)
Q Consensus       232 ~~~ll~~cL~~dP~~Rp-----s~~elL~hp~~~~~~~  264 (385)
                      +++||.+||.+||.+||     ++.|+++||||+..++
T Consensus       248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             HHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence            99999999999999999     8999999999987654


No 43 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=2.2e-51  Score=401.16  Aligned_cols=254  Identities=25%  Similarity=0.392  Sum_probs=215.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|.++.+++.||+|.+....     .+.+.+|+.+|++++||||+++++++.....    +++
T Consensus        30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~----~~l  105 (362)
T 2bdw_A           30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF----HYL  105 (362)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EEE
T ss_pred             CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE----EEE
Confidence            4899999999999999999999999999999986532     2567899999999999999999998765443    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++. ..+||+|||++...... 
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~-  184 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-  184 (362)
T ss_dssp             EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC-
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC-
Confidence            9999999999999998888999999999999999999999999999999999999976543 34899999999876422 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCC--CCCCCCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSD--TPEIPGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~  233 (385)
                       ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+.....  .......++++++
T Consensus       185 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  262 (362)
T 2bdw_A          185 -EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-DQHRLYAQIKAGAYDYPSPEWDTVTPEAK  262 (362)
T ss_dssp             -CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCTTGGGGSCHHHH
T ss_pred             -cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence             2334568999999999999999999999999999999999999999764 33333333322211  1112245799999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||.+||.+||.+|||+.|+|+|||+...
T Consensus       263 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          263 SLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence            99999999999999999999999999754


No 44 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=1.5e-51  Score=400.32  Aligned_cols=254  Identities=28%  Similarity=0.408  Sum_probs=212.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--------NSEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||++...        ..+.+.+|+.++++++||||+++++++.....    
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----  100 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM----  100 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----
T ss_pred             ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE----
Confidence            489999999999999999999999999999987531        35778999999999999999999998876543    


Q ss_pred             EEEEEeecCCCCHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEeecCce
Q 040569           74 YNLFLEYAPGGTLTDAIRS----GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIADFGCA  148 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~----~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~DFG~a  148 (385)
                      +++||||++||+|.+++..    +..+++..++.++.||+.||+|||++||+||||||+|||++.++. ..+||+|||++
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            6799999999999988852    345899999999999999999999999999999999999976543 33899999999


Q ss_pred             eeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC--CCCCCCC
Q 040569          149 RRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS--DTPEIPG  226 (385)
Q Consensus       149 ~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~  226 (385)
                      +...... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...  .......+....  ..+....
T Consensus       181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~i~~~~~~~~~~~~~  257 (351)
T 3c0i_A          181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT--KERLFEGIIKGKYKMNPRQWS  257 (351)
T ss_dssp             EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS--HHHHHHHHHHTCCCCCHHHHT
T ss_pred             eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHcCCCCCCccccc
Confidence            8764322 1234557999999999999999999999999999999999999999763  223333222111  1111224


Q ss_pred             cCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          227 YMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       227 ~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .+|+++++||.+||.+||.+|||+.|+|+||||+..
T Consensus       258 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            579999999999999999999999999999999864


No 45 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=7.7e-52  Score=414.92  Aligned_cols=254  Identities=27%  Similarity=0.442  Sum_probs=210.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+...      ....+.+|+.+|++++||||+++++++.....    ++
T Consensus       149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~----~~  224 (446)
T 4ejn_A          149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR----LC  224 (446)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE----EE
T ss_pred             HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE----EE
Confidence            489999999999999999999999999999988632      23456789999999999999999998876543    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHS-NGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~-~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      +||||++||+|.+++...+.+++..++.++.||+.||+|||+ +||+||||||+|||++.++.  +||+|||+++.....
T Consensus       225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH--IKITDFGLCKEGIKD  302 (446)
T ss_dssp             EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSC--EEECCCCCCCTTCC-
T ss_pred             EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCC--EEEccCCCceeccCC
Confidence            999999999999999977789999999999999999999998 99999999999999987766  999999999854222


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+..  ....+|..+++++++
T Consensus       303 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~--~~~~~p~~~~~~~~~  378 (446)
T 4ejn_A          303 -GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHEKLFELILM--EEIRFPRTLGPEAKS  378 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             -CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC-CHHHHHHHHHh--CCCCCCccCCHHHHH
Confidence             22344568999999999999999999999999999999999999999764 33333333322  234466779999999


Q ss_pred             HHHHhhhcCCCCCC-----CHHHHHhCccccccccc
Q 040569          235 FLSKCLIRNPGERW-----SASELLEHGFVKEQNFK  265 (385)
Q Consensus       235 ll~~cL~~dP~~Rp-----s~~elL~hp~~~~~~~~  265 (385)
                      ||.+||++||.+||     ++.|+|+||||...++.
T Consensus       379 li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~  414 (446)
T 4ejn_A          379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQ  414 (446)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred             HHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHH
Confidence            99999999999999     99999999999987543


No 46 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.1e-51  Score=389.17  Aligned_cols=252  Identities=26%  Similarity=0.379  Sum_probs=206.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------------------------HHHHHHHHHHHHhc
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------------------------SEFLQREQRILSAL   52 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------------------------~~~~~~E~~il~~l   52 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....                             .+.+.+|+++|+++
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            6999999999999999999999999999999886432                             24578999999999


Q ss_pred             CCCCeeeeeeeeeeccCCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEe
Q 040569           53 ACPQIVAYKGCDISEENGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILV  132 (385)
Q Consensus        53 ~hpnIv~~~~~~~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi  132 (385)
                      +||||+++++++.......  +++||||+++++|.+++.. +.+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus        94 ~h~~iv~~~~~~~~~~~~~--~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~  170 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDH--LYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV  170 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSE--EEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCCCCCeEEEEEEcCCCCE--EEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence            9999999999887643332  5699999999999886653 469999999999999999999999999999999999999


Q ss_pred             ecCCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCC---CCCCCChHHHHHHHHHHHhCCCCCCCCCChH
Q 040569          133 SKDNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEE---QGFPADVWALGCTVLEMATGRPPWPDVADPI  209 (385)
Q Consensus       133 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltG~~Pf~~~~~~~  209 (385)
                      +.++.  +||+|||+++...... .......||+.|+|||++.+..   ++.++|||||||++|+|++|+.||... +..
T Consensus       171 ~~~~~--~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~  246 (298)
T 2zv2_A          171 GEDGH--IKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-RIM  246 (298)
T ss_dssp             CTTSC--EEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS-SHH
T ss_pred             CCCCC--EEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc-cHH
Confidence            87766  9999999998764322 1223457999999999998765   377899999999999999999999764 333


Q ss_pred             HHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccc
Q 040569          210 SALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVK  260 (385)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~  260 (385)
                      .....+............+++++++||.+||++||.+|||+.|+|+||||+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            333333222222222345899999999999999999999999999999985


No 47 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=5.9e-51  Score=401.70  Aligned_cols=254  Identities=25%  Similarity=0.396  Sum_probs=215.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++++.||+|+||+||+|+++.+++.+|+|.+....   ...+.+|+.+|++++||||+++++++.....    +++||
T Consensus        52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~----~~lv~  127 (387)
T 1kob_A           52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE----MVLIL  127 (387)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE----EEEEE
T ss_pred             ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCE----EEEEE
Confidence            5899999999999999999999999999999987653   3467899999999999999999998865433    67999


Q ss_pred             eecCCCCHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           79 EYAPGGTLTDAIRSG-TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~-~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      ||++||+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++...+||+|||+++.....  .
T Consensus       128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~  205 (387)
T 1kob_A          128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--E  205 (387)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--S
T ss_pred             EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC--c
Confidence            999999999999854 4799999999999999999999999999999999999998655556999999999876422  2


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC--CCCCCCCCcCCHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS--SDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~l  235 (385)
                      .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||... +....+..+...  ...+.....+++++++|
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  284 (387)
T 1kob_A          206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNVKRCDWEFDEDAFSSVSPEAKDF  284 (387)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHHCCCCCCSSTTTTSCHHHHHH
T ss_pred             ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCccccccCCHHHHHH
Confidence            233457999999999999999999999999999999999999999874 333333333221  12233345689999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||++||.+|||+.|+|+||||...
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          285 IKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             HHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             HHHHcCCChhHCcCHHHHhhCccccCC
Confidence            999999999999999999999999764


No 48 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=2.3e-51  Score=397.32  Aligned_cols=249  Identities=27%  Similarity=0.426  Sum_probs=213.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|++..+++.||+|.+...      ....+.+|+.+|+.++||||+++++++.....    ++
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----~~   85 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTD----IV   85 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EE
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE----EE
Confidence            699999999999999999999999999999988532      24578899999999999999999998766543    66


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+ +|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||++...... 
T Consensus        86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~--~kl~DFG~s~~~~~~-  161 (336)
T 3h4j_B           86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLN--VKIADFGLSNIMTDG-  161 (336)
T ss_dssp             EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCC--EEECCSSCTBTTTTS-
T ss_pred             EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCC--EEEEEeccceeccCC-
Confidence            999999 7799999987778999999999999999999999999999999999999987765  999999999865322 


Q ss_pred             CCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       ......+||+.|+|||++.+..+ ++++|||||||++|+|++|+.||...... .....  .......+|..+|+++++
T Consensus       162 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~--i~~~~~~~p~~~s~~~~~  237 (336)
T 3h4j_B          162 -NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-NLFKK--VNSCVYVMPDFLSPGAQS  237 (336)
T ss_dssp             -BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-TCBCC--CCSSCCCCCTTSCHHHHH
T ss_pred             -cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-HHHHH--HHcCCCCCcccCCHHHHH
Confidence             23345689999999999988876 78999999999999999999999764221 11111  123344567789999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||.+||+.||.+|||++|+++||||+..
T Consensus       238 li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          238 LIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             HHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            9999999999999999999999999753


No 49 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.2e-50  Score=398.75  Aligned_cols=256  Identities=26%  Similarity=0.375  Sum_probs=209.4

Q ss_pred             Cceeeceeecc--CceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRG--STATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G--~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|  +||+||+|+++.+++.||||.+....     .+.+++|+.+|++++||||+++++++.....    +
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~  101 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE----L  101 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----E
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE----E
Confidence            58999999999  99999999999999999999986432     3567789999999999999999999876543    6


Q ss_pred             EEEEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           75 NLFLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      ++||||+++|+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||++....
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~--~kl~dfg~~~~~~  179 (389)
T 3gni_B          102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK--VYLSGLRSNLSMI  179 (389)
T ss_dssp             EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCGGGCEECE
T ss_pred             EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEcccccceeec
Confidence            7999999999999999854  67999999999999999999999999999999999999987765  9999999987543


Q ss_pred             ccC------CCCCCccccCCcccChhhhcC--CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC------
Q 040569          153 VNE------DDEGKPICGTPICMAPEVARG--EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS------  218 (385)
Q Consensus       153 ~~~------~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~------  218 (385)
                      ...      .......+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||................      
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  259 (389)
T 3gni_B          180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD  259 (389)
T ss_dssp             ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred             cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence            221      112234479999999999987  578999999999999999999999998654333222211000      


Q ss_pred             -------------------------------------CCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          219 -------------------------------------SDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       219 -------------------------------------~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                                                           ......+..+++++++||.+||+.||.+|||+.|+|+||||+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~  339 (389)
T 3gni_B          260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  339 (389)
T ss_dssp             ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred             ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence                                                 0011234557899999999999999999999999999999987


Q ss_pred             cc
Q 040569          262 QN  263 (385)
Q Consensus       262 ~~  263 (385)
                      ..
T Consensus       340 ~~  341 (389)
T 3gni_B          340 IK  341 (389)
T ss_dssp             C-
T ss_pred             Hh
Confidence            54


No 50 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=7.9e-51  Score=395.10  Aligned_cols=255  Identities=27%  Similarity=0.396  Sum_probs=201.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+... ..+.+.+|+.+|++++||||+++++++.....    +++||||
T Consensus        54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e~  129 (349)
T 2w4o_A           54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTE----ISLVLEL  129 (349)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSE----EEEEECC
T ss_pred             cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCe----EEEEEEe
Confidence            488999999999999999999999999999998754 34567899999999999999999998865433    6699999


Q ss_pred             cCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeec-CCCCCeEEeecCceeeecccCCCCC
Q 040569           81 APGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSK-DNEQGAKIADFGCARRARVNEDDEG  159 (385)
Q Consensus        81 ~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~-~~~~~~kL~DFG~a~~~~~~~~~~~  159 (385)
                      ++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++. +....+||+|||+++.....  ...
T Consensus       130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~  207 (349)
T 2w4o_A          130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLM  207 (349)
T ss_dssp             CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc--ccc
Confidence            999999999998888999999999999999999999999999999999999975 22334999999999875322  223


Q ss_pred             CccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC--CCCCCCCcCCHHHHHHHH
Q 040569          160 KPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS--DTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       160 ~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~ll~  237 (385)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||............+....  ........+++++++||.
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  287 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR  287 (349)
T ss_dssp             -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHH
Confidence            456799999999999999999999999999999999999999987655544444432221  122233568999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhCcccccc
Q 040569          238 KCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||+.||.+|||+.|+|+||||...
T Consensus       288 ~~L~~dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          288 KLIVLDPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             TTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred             HHccCChhhCcCHHHHhcCcccCCC
Confidence            9999999999999999999999754


No 51 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.3e-50  Score=385.43  Aligned_cols=255  Identities=29%  Similarity=0.404  Sum_probs=208.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--------HHHHHHHHHHHHhcC---CCCeeeeeeeeeeccC-
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--------SEFLQREQRILSALA---CPQIVAYKGCDISEEN-   69 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--------~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~-   69 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....        ...+.+|+.+++++.   ||||+++++++..... 
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~   89 (308)
T 3g33_A           10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD   89 (308)
T ss_dssp             CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence            6999999999999999999999999999999886321        346778888888774   9999999999876543 


Q ss_pred             CeEEEEEEEeecCCCCHHHHHHcCCC--CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCc
Q 040569           70 GKILYNLFLEYAPGGTLTDAIRSGTC--LEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGC  147 (385)
Q Consensus        70 ~~~~~~lv~Ey~~ggsL~~~l~~~~~--l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~  147 (385)
                      ....++++|||+. |+|.+++.....  +++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~  166 (308)
T 3g33_A           90 REIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT--VKLADFGL  166 (308)
T ss_dssp             SEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSC--EEECSCSC
T ss_pred             CceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC--EEEeeCcc
Confidence            3445779999997 599999985543  999999999999999999999999999999999999987766  99999999


Q ss_pred             eeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh----cCCCC--C
Q 040569          148 ARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI----GFSSD--T  221 (385)
Q Consensus       148 a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~----~~~~~--~  221 (385)
                      ++...  ........+||+.|+|||++.+..++.++|||||||++|+|++|++||..... ...+..+    +....  .
T Consensus       167 a~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~  243 (308)
T 3g33_A          167 ARIYS--YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDLIGLPPEDDW  243 (308)
T ss_dssp             TTTST--TCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-HHHHHHHHHHHCCCCTTTS
T ss_pred             ccccC--CCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChhhc
Confidence            98653  22234556899999999999999999999999999999999999999987533 2222222    11000  0


Q ss_pred             C-------------------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          222 P-------------------EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       222 ~-------------------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +                   .....+++++.+||.+||++||.+|||+.|+|+||||+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             CSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             cchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            0                   0113478999999999999999999999999999999864


No 52 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3.4e-51  Score=401.53  Aligned_cols=254  Identities=25%  Similarity=0.399  Sum_probs=210.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------HHHHHHHHHH-HHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------SEFLQREQRI-LSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------~~~~~~E~~i-l~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|++.+..      ...+.+|..+ ++.++||||+++++++.....    +
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~----~  114 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK----L  114 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE----E
T ss_pred             heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE----E
Confidence            5899999999999999999999999999999886432      2345567776 567899999999998876543    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      |+||||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.... 
T Consensus       115 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~--ikL~DFG~a~~~~~-  191 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH--IVLTDFGLCKENIE-  191 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCCBCGGGBC-
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC--EEEeeCcccccccc-
Confidence            799999999999999998778999999999999999999999999999999999999987776  99999999986422 


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                      ........+||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+..  ....++..+++++++
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~--~~~~~~~~~~~~~~~  268 (373)
T 2r5t_A          192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-NTAEMYDNILN--KPLQLKPNITNSARH  268 (373)
T ss_dssp             CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-BHHHHHHHHHH--SCCCCCSSSCHHHHH
T ss_pred             CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHh--cccCCCCCCCHHHHH
Confidence            223345678999999999999999999999999999999999999999764 34444444322  233456679999999


Q ss_pred             HHHHhhhcCCCCCCCH----HHHHhCccccccccc
Q 040569          235 FLSKCLIRNPGERWSA----SELLEHGFVKEQNFK  265 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~----~elL~hp~~~~~~~~  265 (385)
                      ||.+||++||.+||++    .++++||||+..++.
T Consensus       269 li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~  303 (373)
T 2r5t_A          269 LLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWD  303 (373)
T ss_dssp             HHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHH
T ss_pred             HHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHH
Confidence            9999999999999986    699999999987653


No 53 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=9.5e-51  Score=388.02  Aligned_cols=253  Identities=27%  Similarity=0.410  Sum_probs=204.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|++. +++.||+|.+....     ...+.+|+++|++++||||+++++++.....    +++
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----~~l   96 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC----LTL   96 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSC----EEE
T ss_pred             hhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCE----EEE
Confidence            5899999999999999999985 58999999886432     2567899999999999999999998765543    679


Q ss_pred             EEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||+++ +|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus        97 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           97 VFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA--LKLADFGLARAFGIPV  173 (311)
T ss_dssp             EEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEETTSCC
T ss_pred             EEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCC--EEEccCcCceecCCCc
Confidence            9999985 88888874 456999999999999999999999999999999999999987766  9999999998764222


Q ss_pred             CCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHH--HHHhcCCCCCC----------
Q 040569          156 DDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISA--LHRIGFSSDTP----------  222 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~~~~~~~~~~----------  222 (385)
                       .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....+....  +..........          
T Consensus       174 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  252 (311)
T 3niz_A          174 -RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL  252 (311)
T ss_dssp             -C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred             -ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence             22344578999999999976 56899999999999999999999999865433222  21111111110          


Q ss_pred             ---------------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          223 ---------------EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       223 ---------------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                                     .+...+++++++||.+||++||.+|||+.|+|+||||++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence                           01234688999999999999999999999999999998653


No 54 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=3.3e-50  Score=386.07  Aligned_cols=251  Identities=33%  Similarity=0.517  Sum_probs=213.4

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      |+..+.||+|+||+||+|+++.+|+.||||.+...   ..+.+.+|+.++++++||||+++++++.....    +++|||
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e  122 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE----LWVLME  122 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE----EEEEEC
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCE----EEEEEe
Confidence            67788999999999999999999999999988643   35678899999999999999999998876543    669999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCCC
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDEG  159 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~  159 (385)
                      |++||+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++........ ..
T Consensus       123 ~~~~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~~-~~  198 (321)
T 2c30_A          123 FLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVP-KR  198 (321)
T ss_dssp             CCCSCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECCSSSC-CB
T ss_pred             cCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCc--EEEeeeeeeeecccCcc-cc
Confidence            99999999998754 5999999999999999999999999999999999999987766  99999999987643222 23


Q ss_pred             CccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC-CCCCCCCCcCCHHHHHHHHH
Q 040569          160 KPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS-SDTPEIPGYMSKQAQDFLSK  238 (385)
Q Consensus       160 ~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~ll~~  238 (385)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+... ......+..+++++++||.+
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  277 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER  277 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHH
T ss_pred             ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCCCCcCccccCCHHHHHHHHH
Confidence            4557999999999999999999999999999999999999999764 333433333222 11222344589999999999


Q ss_pred             hhhcCCCCCCCHHHHHhCcccccc
Q 040569          239 CLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       239 cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||++||.+|||+.|+|+||||.+.
T Consensus       278 ~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          278 MLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             HSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             HccCChhhCcCHHHHhcChhhccC
Confidence            999999999999999999999754


No 55 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.4e-50  Score=381.91  Aligned_cols=251  Identities=29%  Similarity=0.398  Sum_probs=203.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|++ .+++.+|+|.+....     .+.+.+|++++++++||||+++++++.....    +++
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~l   77 (288)
T 1ob3_A            3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR----LVL   77 (288)
T ss_dssp             SEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC----EEE
T ss_pred             cchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCe----EEE
Confidence            699999999999999999998 678999999886432     3577899999999999999999999876544    679


Q ss_pred             EEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||+++ +|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~  154 (288)
T 1ob3_A           78 VFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE--LKIADFGLARAFGIPV  154 (288)
T ss_dssp             EEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCTTHHHHHCC--
T ss_pred             EEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC--EEEeECccccccCccc
Confidence            9999986 99999984 467999999999999999999999999999999999999987766  9999999997653221


Q ss_pred             CCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc---CCCC-----------
Q 040569          156 DDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG---FSSD-----------  220 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~---~~~~-----------  220 (385)
                       .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||....... .+.++.   ....           
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccc
Confidence             122345789999999999764 58999999999999999999999998754332 222210   0000           


Q ss_pred             -------------CCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          221 -------------TPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       221 -------------~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                   .......+++++++||.+||++||.+|||+.|+|+||||++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                         001224579999999999999999999999999999999753


No 56 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=5.7e-51  Score=395.33  Aligned_cols=254  Identities=27%  Similarity=0.382  Sum_probs=212.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+..... ...+|+++|.++ .||||+++++++.....    +++||||
T Consensus        23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~----~~lv~E~   97 (342)
T 2qr7_A           23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRYGQHPNIITLKDVYDDGKY----VYVVTEL   97 (342)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHHTTSTTBCCEEEEEECSSE----EEEEECC
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE----EEEEEeC
Confidence            48899999999999999999999999999999976432 345789999988 79999999998765432    6799999


Q ss_pred             cCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC--CCeEEeecCceeeecccCCCC
Q 040569           81 APGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE--QGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        81 ~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~--~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      ++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||+..+..  ..+||+|||+++...... ..
T Consensus        98 ~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~  176 (342)
T 2qr7_A           98 MKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-GL  176 (342)
T ss_dssp             CCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT-CC
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC-Cc
Confidence            999999999998888999999999999999999999999999999999999854322  238999999998764322 23


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCC--CChHHHHHHhcCCC--CCCCCCCcCCHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDV--ADPISALHRIGFSS--DTPEIPGYMSKQAQD  234 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~--~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~  234 (385)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...  .........+....  .....+..+|+++++
T Consensus       177 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  256 (342)
T 2qr7_A          177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD  256 (342)
T ss_dssp             BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHH
T ss_pred             eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHH
Confidence            34568999999999999888999999999999999999999999753  23333444432221  122234568999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      ||.+||.+||.+|||+.|+|+||||..
T Consensus       257 li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          257 LVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            999999999999999999999999965


No 57 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=2.2e-50  Score=380.40  Aligned_cols=253  Identities=29%  Similarity=0.430  Sum_probs=217.9

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      |++.+.||+|+||+||+|.+..++..+|+|.+...     ..+.+.+|+.+|++++||||+++++++.....+...+++|
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            77889999999999999999999999999987532     2356789999999999999999999987665555567899


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCEEee-cCCCCCeEEeecCceeeeccc
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNG--IVHCDIKGQNILVS-KDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~g--ivHrDlKp~NILi~-~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      |||+++|+|.+++...+.+++..+..++.||+.||.|||++|  |+||||||+|||++ .++.  +||+|||++....  
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~--~kl~Dfg~~~~~~--  183 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGLATLKR--  183 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSC--EEECCTTGGGGCC--
T ss_pred             EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCC--EEEeeCCCccccc--
Confidence            999999999999997778999999999999999999999999  99999999999997 4444  9999999996542  


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       ........||+.|+|||++.+ .++.++|||||||++|+|++|+.||....+.......+.........+...++++.+
T Consensus       184 -~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  261 (290)
T 1t4h_A          184 -ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE  261 (290)
T ss_dssp             -TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred             -ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHH
Confidence             122334579999999998875 589999999999999999999999988766666666655444455566678899999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      ||.+||+.||.+|||+.|+|+||||++
T Consensus       262 li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          262 IIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHccCChhhCCCHHHHhhCccccc
Confidence            999999999999999999999999975


No 58 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2.8e-51  Score=394.40  Aligned_cols=252  Identities=24%  Similarity=0.352  Sum_probs=194.1

Q ss_pred             eceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcC-CCCeeeeeeeeeeccCCeEEEEEEEeecCCC
Q 040569            6 GQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALA-CPQIVAYKGCDISEENGKILYNLFLEYAPGG   84 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~~~~lv~Ey~~gg   84 (385)
                      ++.||+|+||+||+|+++.+++.||||.+.......+++|+.+++.+. ||||+++++++.....    +++||||++||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~----~~lv~e~~~~~   91 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLH----TFLVMELLNGG   91 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE----EEEEECCCCSC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE----EEEEEEccCCC
Confidence            478999999999999999999999999998777788899999999996 9999999999865433    67999999999


Q ss_pred             CHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCC-CeEEeecCceeeecccCCCCCCccc
Q 040569           85 TLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQ-GAKIADFGCARRARVNEDDEGKPIC  163 (385)
Q Consensus        85 sL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~-~~kL~DFG~a~~~~~~~~~~~~~~~  163 (385)
                      +|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.. .+||+|||+++..... .......+
T Consensus        92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~  170 (325)
T 3kn6_A           92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPC  170 (325)
T ss_dssp             BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC-CCcccccC
Confidence            999999988889999999999999999999999999999999999999865422 3899999999865422 22334567


Q ss_pred             cCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC------ChHHHHHHhcCCCCCCC--CCCcCCHHHHHH
Q 040569          164 GTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA------DPISALHRIGFSSDTPE--IPGYMSKQAQDF  235 (385)
Q Consensus       164 Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~------~~~~~~~~~~~~~~~~~--~~~~~s~~~~~l  235 (385)
                      ||+.|+|||++.+..++.++|||||||++|+|++|+.||....      .....+..+........  ....+|+++++|
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  250 (325)
T 3kn6_A          171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL  250 (325)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred             CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence            9999999999999999999999999999999999999997532      22334444432221111  113479999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||.+||.+|||+.|+++||||+..
T Consensus       251 i~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          251 IQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             HHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             HHHHCCCChhHCCCHHHHhcChhhccC
Confidence            999999999999999999999999754


No 59 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.3e-50  Score=379.08  Aligned_cols=249  Identities=28%  Similarity=0.423  Sum_probs=194.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+++.||+|.+...      ..+.+.+|+.++++++||||+++++++.....    ++
T Consensus        14 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~   89 (275)
T 2eue_A           14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE----II   89 (275)
T ss_dssp             CBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSC----EE
T ss_pred             ceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCe----EE
Confidence            699999999999999999999999999999988643      24578899999999999999999998876544    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+ +++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++.......
T Consensus        90 lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~  166 (275)
T 2eue_A           90 MVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN--VKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSC--EEECCSSCC-------
T ss_pred             EEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCC--EEEeecccceeccCcc
Confidence            999999 6799999988788999999999999999999999999999999999999987766  9999999998653222


Q ss_pred             CCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                        .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.... .......+.  .....++..+++.+.+
T Consensus       167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~  241 (275)
T 2eue_A          167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-IPVLFKNIS--NGVYTLPKFLSPGAAG  241 (275)
T ss_dssp             ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHH--HTCCCCCTTSCHHHHH
T ss_pred             --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHH--hCCCCCCccCCHHHHH
Confidence              2344579999999999988765 789999999999999999999997643 333333332  2234566779999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||.+||++||.+|||+.|+|+||||+..
T Consensus       242 li~~~l~~dP~~Rps~~e~l~h~~f~~~  269 (275)
T 2eue_A          242 LIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHHHHhhcCHhHCCCHHHHhhCCeeccc
Confidence            9999999999999999999999999753


No 60 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=3.9e-50  Score=405.70  Aligned_cols=250  Identities=26%  Similarity=0.410  Sum_probs=217.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|.+++.||+|+||+||+|+++.+|+.||||++...      ..+.+.+|+.+|+.++||||+++++++.....    ++
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~----~~   92 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD----IF   92 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EE
T ss_pred             CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE----EE
Confidence            589999999999999999999999999999988632      34678899999999999999999998765443    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++..... 
T Consensus        93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~--vkL~DFG~a~~~~~~-  169 (476)
T 2y94_A           93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDG-  169 (476)
T ss_dssp             EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCC--EEECCCSSCEECCTT-
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCC--eEEEeccchhhcccc-
Confidence            99999999999999998888999999999999999999999999999999999999987766  999999999876432 


Q ss_pred             CCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... ......+..  .....|..+++++++
T Consensus       170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~--~~~~~p~~~s~~~~~  245 (476)
T 2y94_A          170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-PTLFKKICD--GIFYTPQYLNPSVIS  245 (476)
T ss_dssp             -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-HHHHHHHHT--TCCCCCTTCCHHHHH
T ss_pred             -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-HHHHHHHhc--CCcCCCccCCHHHHH
Confidence             23345689999999999988765 6899999999999999999999987543 333333322  234456778999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||.+||+.||.+|||+.|+++||||+..
T Consensus       246 Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          246 LLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            9999999999999999999999999864


No 61 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=4e-50  Score=384.79  Aligned_cols=254  Identities=28%  Similarity=0.399  Sum_probs=215.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---------NSEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|+++.+++.+|+|.+...         ..+.+.+|+.+|+++.||||+++++++.....   
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---   89 (321)
T 2a2a_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD---   89 (321)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE---
T ss_pred             cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE---
Confidence            489999999999999999999999999999988643         25678899999999999999999998765433   


Q ss_pred             EEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCC--CeEEeecCceee
Q 040569           73 LYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQ--GAKIADFGCARR  150 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~--~~kL~DFG~a~~  150 (385)
                       +++||||++|++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++..  .+||+|||+++.
T Consensus        90 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           90 -VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             -EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             -EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence             67999999999999999988889999999999999999999999999999999999999876521  489999999987


Q ss_pred             ecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC--CCCCCCCcC
Q 040569          151 ARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS--DTPEIPGYM  228 (385)
Q Consensus       151 ~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~  228 (385)
                      ....  .......||+.|+|||++.+..++.++|||||||++|+|++|+.||... .....+..+....  ..+..+..+
T Consensus       169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~  245 (321)
T 2a2a_A          169 IEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANITSVSYDFDEEFFSHT  245 (321)
T ss_dssp             CCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCCHHHHTTC
T ss_pred             cCcc--ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcccccChhhhccc
Confidence            6432  2234557999999999999999999999999999999999999999764 3333333332211  111223468


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ++.+++||.+||.+||.+|||+.|+|+||||...
T Consensus       246 ~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence            9999999999999999999999999999999764


No 62 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.8e-50  Score=398.45  Aligned_cols=256  Identities=23%  Similarity=0.352  Sum_probs=203.9

Q ss_pred             Cceee-ceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHh-cCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRG-QTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSA-LACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~-~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|.+. +.||+|+||+||+|+++.+++.||||++..  ...+.+|+.++.+ .+||||+++++++.....+...++||||
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E  139 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME  139 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc--chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence            46665 789999999999999999999999999863  4567789999855 4899999999988764444556789999


Q ss_pred             ecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeecccCC
Q 040569           80 YAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRARVNED  156 (385)
Q Consensus        80 y~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~~~~~  156 (385)
                      |++||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++ ...+||+|||+++.....  
T Consensus       140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~--  217 (400)
T 1nxk_A          140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--  217 (400)
T ss_dssp             CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred             eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC--
Confidence            99999999999854  3599999999999999999999999999999999999998632 234899999999875322  


Q ss_pred             CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC------hHHHHHHhcCCCCCCCCCCcCCH
Q 040569          157 DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD------PISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~------~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.....      ....+..-.+.... .....+|+
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~  296 (400)
T 1nxk_A          218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVSE  296 (400)
T ss_dssp             ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCT-TTTTTSCH
T ss_pred             CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCC-cccccCCH
Confidence            223456899999999999999999999999999999999999999975422      11222221111111 12245899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ++++||.+||++||.+|||+.|+|+||||...
T Consensus       297 ~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence            99999999999999999999999999999753


No 63 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=8e-50  Score=374.92  Aligned_cols=255  Identities=25%  Similarity=0.385  Sum_probs=214.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|.++.+++.||+|.+....     .+.+.+|+.++++++||||+++++++.....    .++
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~~   82 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF----HYL   82 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EEE
T ss_pred             hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCE----EEE
Confidence            6999999999999999999999999999999885432     3567799999999999999999998765432    569


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||++|++|.+.+.....+++..+..++.||+.||.|||++||+||||||+||+++.++. ..+||+|||++...... 
T Consensus        83 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~-  161 (284)
T 3kk8_A           83 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-  161 (284)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS-
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC-
Confidence            9999999999999987778999999999999999999999999999999999999976543 33899999999876422 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC--CCCCCCCCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS--SDTPEIPGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~  233 (385)
                       .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+...  .........+++++.
T Consensus       162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T 3kk8_A          162 -EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPEWDTVTPEAK  239 (284)
T ss_dssp             -CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred             -ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-hhHHHHHHHhccccCCchhhcccCHHHH
Confidence             22344679999999999999999999999999999999999999997643 33333333211  112222346899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      +||.+||++||.+|||+.|+|+||||....
T Consensus       240 ~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          240 SLIDSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             HHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence            999999999999999999999999998654


No 64 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=2.3e-50  Score=378.28  Aligned_cols=249  Identities=29%  Similarity=0.472  Sum_probs=212.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|.++.+++.+|+|.+..      .....+.+|+.++++++||||+++++++.....    ++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~   85 (279)
T 3fdn_A           10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR----VY   85 (279)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EE
T ss_pred             cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCE----EE
Confidence            58999999999999999999999999999998853      234568899999999999999999998765433    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+++|+|.+++.....+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++...... 
T Consensus        86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~--~~l~Dfg~~~~~~~~-  162 (279)
T 3fdn_A           86 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPSS-  162 (279)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSC--EEECSCCEESCC----
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCC--EEEEeccccccCCcc-
Confidence            99999999999999997778999999999999999999999999999999999999987766  999999998654322 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                        ......||+.|+|||++.+..++.++||||||+++|+|++|+.||... +.......+.  .....++..+++.+++|
T Consensus       163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l  237 (279)
T 3fdn_A          163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-TYQETYKRIS--RVEFTFPDFVTEGARDL  237 (279)
T ss_dssp             -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHH--HTCCCCCTTSCHHHHHH
T ss_pred             --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-cHHHHHHHHH--hCCCCCCCcCCHHHHHH
Confidence              223457999999999999999999999999999999999999999864 3333333332  12334566789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||+.||.+|||+.|+|+||||+..
T Consensus       238 i~~~l~~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             HHHHhccChhhCCCHHHHhhCccccCC
Confidence            999999999999999999999999864


No 65 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1.8e-50  Score=386.88  Aligned_cols=253  Identities=28%  Similarity=0.426  Sum_probs=196.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|.+....    .+.+.+|+.+|++++||||+++++++.....    +++|
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----~~lv   81 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENK----LTLV   81 (317)
T ss_dssp             -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTE----EEEE
T ss_pred             ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCe----EEEE
Confidence            6899999999999999999999999999999886432    3678899999999999999999998765432    6799


Q ss_pred             EeecCCCCHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           78 LEYAPGGTLTDAIRSG------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      |||++ |+|.+++...      ..+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus        82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~  158 (317)
T 2pmi_A           82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ--LKLGDFGLARAF  158 (317)
T ss_dssp             EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCSSCEET
T ss_pred             EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCC--EEECcCccceec
Confidence            99998 5999998632      35899999999999999999999999999999999999987766  999999999876


Q ss_pred             cccCCCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh----cCCC-------
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI----GFSS-------  219 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~----~~~~-------  219 (385)
                      .... ......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||..... ...+..+    +...       
T Consensus       159 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~  236 (317)
T 2pmi_A          159 GIPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-EEQLKLIFDIMGTPNESLWPSV  236 (317)
T ss_dssp             TSCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCTTTCGGG
T ss_pred             CCCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChhHhhhh
Confidence            4222 223445799999999999764 689999999999999999999999987533 2222221    1000       


Q ss_pred             --------C-------------CCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          220 --------D-------------TPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       220 --------~-------------~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                              .             .+..+..+++++++||.+||++||.+|||+.|+|+||||++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence                    0             0011235789999999999999999999999999999998653


No 66 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.4e-50  Score=396.63  Aligned_cols=254  Identities=29%  Similarity=0.397  Sum_probs=199.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--C---HHHHHHHHHHHHhcC-CCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--N---SEFLQREQRILSALA-CPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~---~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+...  .   ...+.+|+.+|+++. ||||+++++++.......  ++
T Consensus        10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~--~~   87 (388)
T 3oz6_A           10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD--VY   87 (388)
T ss_dssp             TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC--EE
T ss_pred             ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE--EE
Confidence            699999999999999999999999999999988532  1   345668999999996 999999999987654323  56


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++ |+|.++++.+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+|+......
T Consensus        88 lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH--VKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EEEECCS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEESSSCC
T ss_pred             EEecccC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCC--EEecCCcccccccccc
Confidence            9999997 5999999864 6999999999999999999999999999999999999987766  9999999998653210


Q ss_pred             --------------------CCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHH
Q 040569          156 --------------------DDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHR  214 (385)
Q Consensus       156 --------------------~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~  214 (385)
                                          .......+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.. ....+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~  242 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS-TMNQLER  242 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHH
Confidence                                112234589999999999987 678999999999999999999999998753 3333332


Q ss_pred             hcCCCCCC---------------------------------------------CCCCcCCHHHHHHHHHhhhcCCCCCCC
Q 040569          215 IGFSSDTP---------------------------------------------EIPGYMSKQAQDFLSKCLIRNPGERWS  249 (385)
Q Consensus       215 ~~~~~~~~---------------------------------------------~~~~~~s~~~~~ll~~cL~~dP~~Rps  249 (385)
                      +......|                                             ..+..+++++.+||.+||+.||.+|||
T Consensus       243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t  322 (388)
T 3oz6_A          243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS  322 (388)
T ss_dssp             HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence            21000000                                             011257899999999999999999999


Q ss_pred             HHHHHhCcccccc
Q 040569          250 ASELLEHGFVKEQ  262 (385)
Q Consensus       250 ~~elL~hp~~~~~  262 (385)
                      ++|+|+||||+..
T Consensus       323 ~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          323 ANDALKHPFVSIF  335 (388)
T ss_dssp             HHHHTTSTTTTTT
T ss_pred             HHHHhCCHHHHHh
Confidence            9999999999764


No 67 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=7.3e-50  Score=376.70  Aligned_cols=252  Identities=25%  Similarity=0.401  Sum_probs=204.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++.+.||+|+||+||+|.++.+++.+|+|.+...    ..+.+.+|+++|++++||||+++++++.....    +++|
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----~~lv   98 (285)
T 3is5_A           23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN----MYIV   98 (285)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EEEE
T ss_pred             heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCe----EEEE
Confidence            488999999999999999999999999999988542    35788999999999999999999998765433    6799


Q ss_pred             EeecCCCCHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeec
Q 040569           78 LEYAPGGTLTDAIR----SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRAR  152 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~----~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~  152 (385)
                      |||++||+|.+++.    .+..+++..+..++.||+.||+|||++||+||||||+|||++.+. ...+||+|||++....
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            99999999999985    346799999999999999999999999999999999999995432 2348999999998653


Q ss_pred             ccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC-CCCCCCCCCcCCHH
Q 040569          153 VNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF-SSDTPEIPGYMSKQ  231 (385)
Q Consensus       153 ~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~  231 (385)
                      ..  .......||+.|+|||++. ..++.++|||||||++|+|++|+.||.... .......... ....+.....++++
T Consensus       179 ~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  254 (285)
T 3is5_A          179 SD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-LEEVQQKATYKEPNYAVECRPLTPQ  254 (285)
T ss_dssp             ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCC--CCCCHH
T ss_pred             Cc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC-HHHHHhhhccCCcccccccCcCCHH
Confidence            22  2234557999999999986 467889999999999999999999998753 3333222222 22222223347999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          232 AQDFLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       232 ~~~ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      +.+||.+||+.||.+|||+.|+|+||||++
T Consensus       255 ~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            999999999999999999999999999975


No 68 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=5.2e-50  Score=402.67  Aligned_cols=260  Identities=28%  Similarity=0.377  Sum_probs=195.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--C---HHHHHHHHHHHHhcCCCCeeeeeeeeeecc-CCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--N---SEFLQREQRILSALACPQIVAYKGCDISEE-NGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++...  .   .+.+.+|+.+|++++||||+++++++.... .....+|
T Consensus        54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~  133 (458)
T 3rp9_A           54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY  133 (458)
T ss_dssp             TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence            589999999999999999999999999999988642  1   356779999999999999999999886543 2222367


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+ +|+|.+++.....+++..++.++.||+.||+|||++||+||||||+||||+.++.  +||+|||+|+......
T Consensus       134 lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~--~kl~DFGla~~~~~~~  210 (458)
T 3rp9_A          134 VVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCS--VKVCDFGLARTVDYPE  210 (458)
T ss_dssp             EEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC--EEECCCTTCBCTTSCT
T ss_pred             EEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCC--EeecccccchhccCcc
Confidence            999998 4699999998888999999999999999999999999999999999999988766  9999999998754221


Q ss_pred             C--------------------------CCCCccccCCcccChhhh-cCCCCCCCCChHHHHHHHHHHHh-----------
Q 040569          156 D--------------------------DEGKPICGTPICMAPEVA-RGEEQGFPADVWALGCTVLEMAT-----------  197 (385)
Q Consensus       156 ~--------------------------~~~~~~~Gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~ellt-----------  197 (385)
                      .                          ......+||+.|+|||++ .+..++.++|||||||++|||++           
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~  290 (458)
T 3rp9_A          211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD  290 (458)
T ss_dssp             TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGG
T ss_pred             ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccc
Confidence            1                          123445789999999986 56679999999999999999999           


Q ss_pred             CCCCCCCCCC-------------------hHHHHHHh----cC---------------------C----CCCCCCCCcCC
Q 040569          198 GRPPWPDVAD-------------------PISALHRI----GF---------------------S----SDTPEIPGYMS  229 (385)
Q Consensus       198 G~~Pf~~~~~-------------------~~~~~~~~----~~---------------------~----~~~~~~~~~~s  229 (385)
                      |+++|.+...                   ....+..+    +.                     .    ..........+
T Consensus       291 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  370 (458)
T 3rp9_A          291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASS  370 (458)
T ss_dssp             CCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSC
T ss_pred             ccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCC
Confidence            6777765321                   01111110    00                     0    00011123468


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHhCcccccccc
Q 040569          230 KQAQDFLSKCLIRNPGERWSASELLEHGFVKEQNF  264 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~~  264 (385)
                      +++.+||.+||.+||.+|||++|+|+||||+....
T Consensus       371 ~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          371 ADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence            99999999999999999999999999999987643


No 69 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=8.2e-51  Score=389.06  Aligned_cols=254  Identities=22%  Similarity=0.333  Sum_probs=206.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC--------
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEEN--------   69 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--------   69 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++....    .+.+.+|+++|++++||||+++++++.....        
T Consensus         7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~   86 (332)
T 3qd2_B            7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD   86 (332)
T ss_dssp             HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred             cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence            5899999999999999999999999999999986432    3678899999999999999999998765432        


Q ss_pred             ---------------------------------------------CeEEEEEEEeecCCCCHHHHHHcCCC---CCHHHH
Q 040569           70 ---------------------------------------------GKILYNLFLEYAPGGTLTDAIRSGTC---LEEGRI  101 (385)
Q Consensus        70 ---------------------------------------------~~~~~~lv~Ey~~ggsL~~~l~~~~~---l~e~~~  101 (385)
                                                                   ...++++|||||+||+|.++++....   .++..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  166 (332)
T 3qd2_B           87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC  166 (332)
T ss_dssp             C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred             hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence                                                         11236799999999999999986543   456678


Q ss_pred             HHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC-----------CCCCccccCCcccC
Q 040569          102 RSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED-----------DEGKPICGTPICMA  170 (385)
Q Consensus       102 ~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~-----------~~~~~~~Gt~~y~a  170 (385)
                      ..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.......           ......+||+.|+|
T Consensus       167 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCC--EEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            999999999999999999999999999999987765  99999999987643321           12234579999999


Q ss_pred             hhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCH
Q 040569          171 PEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSA  250 (385)
Q Consensus       171 PE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~  250 (385)
                      ||++.+..++.++|||||||++|+|++|..|+..   ........ .....+..+...++++++||.+||++||.+|||+
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  320 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---RVRIITDV-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEA  320 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---HHHHHHHH-HTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---HHHHHHHh-hccCCCcccccCChhHHHHHHHHccCCCCcCCCH
Confidence            9999999999999999999999999999877632   22222222 1223333334467889999999999999999999


Q ss_pred             HHHHhCccccc
Q 040569          251 SELLEHGFVKE  261 (385)
Q Consensus       251 ~elL~hp~~~~  261 (385)
                      .|+|+||||++
T Consensus       321 ~~~l~~~~f~~  331 (332)
T 3qd2_B          321 TDIIENAIFEN  331 (332)
T ss_dssp             HHHHHSTTCCC
T ss_pred             HHHhhchhhhc
Confidence            99999999974


No 70 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=4e-50  Score=412.54  Aligned_cols=254  Identities=28%  Similarity=0.385  Sum_probs=216.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||+|.+..      .....+.+|+++|++++||||+++++++.....    ++
T Consensus       185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~----l~  260 (576)
T 2acx_A          185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA----LC  260 (576)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EE
T ss_pred             ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCE----EE
Confidence            48899999999999999999999999999998853      234667899999999999999999998765443    67


Q ss_pred             EEEeecCCCCHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           76 LFLEYAPGGTLTDAIRSGT--CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~--~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      +||||++||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+||||+.++.  +||+|||+++....
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~--vKL~DFGla~~~~~  338 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH--IRISDLGLAVHVPE  338 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEECCT
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCC--eEEEecccceeccc
Confidence            9999999999999998543  4999999999999999999999999999999999999987766  99999999987642


Q ss_pred             cCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHhcCCCCCCCCCCcCCH
Q 040569          154 NEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD---PISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       154 ~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      .  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .......+.  .....++..+|+
T Consensus       339 ~--~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~~~~~p~~~s~  414 (576)
T 2acx_A          339 G--QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVPEEYSERFSP  414 (576)
T ss_dssp             T--CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HCCCCCCTTSCH
T ss_pred             C--ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cccccCCccCCH
Confidence            2  222345899999999999999999999999999999999999999976432   222222221  223455677999


Q ss_pred             HHHHHHHHhhhcCCCCCC-----CHHHHHhCccccccccc
Q 040569          231 QAQDFLSKCLIRNPGERW-----SASELLEHGFVKEQNFK  265 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rp-----s~~elL~hp~~~~~~~~  265 (385)
                      ++++||.+||++||.+||     +++|+++||||+..++.
T Consensus       415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~  454 (576)
T 2acx_A          415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK  454 (576)
T ss_dssp             HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHH
T ss_pred             HHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHH
Confidence            999999999999999999     79999999999987553


No 71 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=6.8e-50  Score=420.09  Aligned_cols=254  Identities=26%  Similarity=0.438  Sum_probs=221.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++.+      ...+.+.+|..+|..+ .||+|+++++++.....    +
T Consensus       342 ~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~----~  417 (674)
T 3pfq_A          342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR----L  417 (674)
T ss_dssp             TEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE----E
T ss_pred             ceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE----E
Confidence            68999999999999999999999999999998863      2346677899999988 79999999988765443    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ||||||++||+|.+++...+.+++..++.|+.||+.||+|||++||+||||||+||||+.++.  +||+|||+|+.....
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~--ikL~DFGla~~~~~~  495 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWD  495 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSC--EEECCCTTCEECCCT
T ss_pred             EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCc--EEEeecceeeccccC
Confidence            799999999999999997778999999999999999999999999999999999999988776  999999999864322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       .......+||+.|||||++.+..++.++|||||||++|||++|+.||... +.......+..  ....+|..+|+++++
T Consensus       496 -~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~--~~~~~p~~~s~~~~~  571 (674)
T 3pfq_A          496 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIME--HNVAYPKSMSKEAVA  571 (674)
T ss_dssp             -TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHS--SCCCCCTTSCHHHHH
T ss_pred             -CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-CHHHHHHHHHh--CCCCCCccCCHHHHH
Confidence             22345678999999999999999999999999999999999999999874 44444445432  335567789999999


Q ss_pred             HHHHhhhcCCCCCCCH-----HHHHhCccccccccc
Q 040569          235 FLSKCLIRNPGERWSA-----SELLEHGFVKEQNFK  265 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~-----~elL~hp~~~~~~~~  265 (385)
                      ||.+||++||.+||++     +|+++||||+..++.
T Consensus       572 li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~  607 (674)
T 3pfq_A          572 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE  607 (674)
T ss_dssp             HHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHH
T ss_pred             HHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHH
Confidence            9999999999999997     999999999987654


No 72 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.5e-50  Score=388.96  Aligned_cols=257  Identities=28%  Similarity=0.414  Sum_probs=208.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC--------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL--------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~--------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++++.||+|+||+||+|+++.+++.+|+|.+..        ...+.+.+|+++|++++||||+++++++.....    
T Consensus        27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----  102 (345)
T 3hko_A           27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY----  102 (345)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----
T ss_pred             heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe----
Confidence            48999999999999999999999999999998753        224678899999999999999999999865432    


Q ss_pred             EEEEEeecCCCCHHHHHHc----------------------------------------CCCCCHHHHHHHHHHHHHHHH
Q 040569           74 YNLFLEYAPGGTLTDAIRS----------------------------------------GTCLEEGRIRSHTRAVLLGLQ  113 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~----------------------------------------~~~l~e~~~~~i~~qil~gL~  113 (385)
                      +++||||++||+|.+++..                                        ...+++..++.++.||+.||+
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            6799999999999999852                                        112467889999999999999


Q ss_pred             HHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC---CCCccccCCcccChhhhcC--CCCCCCCChHHH
Q 040569          114 YLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD---EGKPICGTPICMAPEVARG--EEQGFPADVWAL  188 (385)
Q Consensus       114 yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~---~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSl  188 (385)
                      |||++||+||||||+|||++.++...+||+|||+++........   ......||+.|+|||++.+  ..++.++|||||
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            99999999999999999998766445999999999876432221   2345679999999999975  678899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCC--CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          189 GCTVLEMATGRPPWPDVADPISALHRIGFSSDTPE--IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       189 G~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      ||++|+|++|+.||...... .....+........  ....+++++++||.+||++||.+|||+.|+|+||||++..
T Consensus       263 G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVNDA-DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             HHHHHHHHHCCCCCCCCChH-HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            99999999999999875433 33333322221111  1234799999999999999999999999999999998654


No 73 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.7e-50  Score=381.63  Aligned_cols=254  Identities=28%  Similarity=0.413  Sum_probs=206.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|.+....     .+.+.+|++++++++||||+++++++.....    +++
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~l   79 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR----LHL   79 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----EEE
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCe----EEE
Confidence            6999999999999999999999999999999885433     2456789999999999999999999865443    669


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      ||||+++++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++....... 
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~-  156 (311)
T 4agu_A           80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSV--IKLCDFGFARLLTGPS-  156 (311)
T ss_dssp             EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECC----
T ss_pred             EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCC--EEEeeCCCchhccCcc-
Confidence            9999999999999998888999999999999999999999999999999999999987765  9999999998764222 


Q ss_pred             CCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc-------------------
Q 040569          157 DEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG-------------------  216 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-------------------  216 (385)
                      ......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ...+.                   
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  235 (311)
T 4agu_A          157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFSTNQY  235 (311)
T ss_dssp             ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred             cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccccccccccccc
Confidence            22344579999999999976 5679999999999999999999999987533222 21110                   


Q ss_pred             -CCCCCCCC---------CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          217 -FSSDTPEI---------PGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       217 -~~~~~~~~---------~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                       .....+..         ...+++++.+||.+||+.||.+|||++|+|+||||+...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence             00000100         134789999999999999999999999999999998753


No 74 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2e-50  Score=388.64  Aligned_cols=256  Identities=25%  Similarity=0.395  Sum_probs=203.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+....     .+.+.+|+.+|++++||||+++++++.....    +++
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~l  110 (329)
T 3gbz_A           35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR----LHL  110 (329)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTE----EEE
T ss_pred             hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE----EEE
Confidence            5899999999999999999999999999999986543     2346689999999999999999999876543    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC---CCCeEEeecCceeeecc
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN---EQGAKIADFGCARRARV  153 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~---~~~~kL~DFG~a~~~~~  153 (385)
                      ||||++| +|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++   ...+||+|||+++....
T Consensus       111 v~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~  189 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI  189 (329)
T ss_dssp             EEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred             EEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence            9999985 9999999888899999999999999999999999999999999999996432   22389999999986532


Q ss_pred             cCCCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh----cCCCC--------
Q 040569          154 NEDDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI----GFSSD--------  220 (385)
Q Consensus       154 ~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~----~~~~~--------  220 (385)
                      .. ......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...... ..+..+    +....        
T Consensus       190 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  267 (329)
T 3gbz_A          190 PI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTWPGVTA  267 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             cc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhhhhhhh
Confidence            22 223445789999999999875 4799999999999999999999999875433 222222    11000        


Q ss_pred             -------CCC---------CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccccc
Q 040569          221 -------TPE---------IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQNF  264 (385)
Q Consensus       221 -------~~~---------~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~~  264 (385)
                             .+.         ++..+++++++||.+||++||.+|||+.|+|+||||+..++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred             hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence                   000         01126899999999999999999999999999999987543


No 75 
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=1e-49  Score=374.73  Aligned_cols=250  Identities=27%  Similarity=0.451  Sum_probs=215.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|++..+++.+|+|.+..      .....+.+|++++++++||||+++++++.....    ++
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~   90 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR----IY   90 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EE
T ss_pred             hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE----EE
Confidence            58999999999999999999999999999998853      234678899999999999999999998765432    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.  +||+|||++...... 
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~Dfg~~~~~~~~-  167 (284)
T 2vgo_A           91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE--LKIADFGWSVHAPSL-  167 (284)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCC--EEECCCTTCEECSSS-
T ss_pred             EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCC--EEEecccccccCccc-
Confidence            99999999999999987778999999999999999999999999999999999999987766  999999999765321 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                        ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+.  .....++..+++++++|
T Consensus       168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~l  242 (284)
T 2vgo_A          168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-HTETHRRIV--NVDLKFPPFLSDGSKDL  242 (284)
T ss_dssp             --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHH--TTCCCCCTTSCHHHHHH
T ss_pred             --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-HhHHHHHHh--ccccCCCCcCCHHHHHH
Confidence              2334579999999999999999999999999999999999999997643 333333332  12334567789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      |.+||..||.+|||+.|+++||||+...
T Consensus       243 i~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             HHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence            9999999999999999999999998643


No 76 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.5e-50  Score=375.52  Aligned_cols=255  Identities=28%  Similarity=0.446  Sum_probs=214.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|.++.+++.+|+|.+...    ..+.+.+|+.++++++||||+++++++.....    +++|
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv   83 (276)
T 2yex_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI----QYLF   83 (276)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE----EEEE
T ss_pred             ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCE----EEEE
Confidence            589999999999999999999999999999988532    24678899999999999999999998765432    6699


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC-
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED-  156 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~-  156 (385)
                      |||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+||+++.++.  +||+|||++........ 
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN--LKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECEETTEE
T ss_pred             EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCC--EEEeeCCCccccCCCcch
Confidence            999999999999987778999999999999999999999999999999999999987766  99999999986543221 


Q ss_pred             CCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          157 DEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                      .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||............+............+++.+++|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL  241 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHH
Confidence            12345579999999999987765 77899999999999999999999865443333333222222222234689999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||+.||.+|||+.|+++||||+..
T Consensus       242 i~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          242 LHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHCCCCchhCCCHHHHhcCccccCh
Confidence            999999999999999999999999764


No 77 
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.6e-49  Score=380.96  Aligned_cols=253  Identities=24%  Similarity=0.342  Sum_probs=212.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcC-CCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALA-CPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+.....+.+.+|+.+|+++. ||||+++++++.......  .++||||
T Consensus        37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~--~~lv~e~  114 (330)
T 3nsz_A           37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRT--PALVFEH  114 (330)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC--EEEEEEC
T ss_pred             ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc--eEEEEec
Confidence            5899999999999999999999999999999999888899999999999996 999999999887643333  5689999


Q ss_pred             cCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCCCC
Q 040569           81 APGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDEGK  160 (385)
Q Consensus        81 ~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~~  160 (385)
                      +++++|.++++.   +++..++.++.||+.||+|||++||+||||||+|||++.++. .+||+|||+++.....  ....
T Consensus       115 ~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~-~~kl~Dfg~a~~~~~~--~~~~  188 (330)
T 3nsz_A          115 VNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPG--QEYN  188 (330)
T ss_dssp             CCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT-EEEECCCTTCEECCTT--CCCC
T ss_pred             cCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCC-EEEEEeCCCceEcCCC--Cccc
Confidence            999999999864   899999999999999999999999999999999999986552 3899999999876432  2334


Q ss_pred             ccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC----------------CC----
Q 040569          161 PICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF----------------SS----  219 (385)
Q Consensus       161 ~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~----------------~~----  219 (385)
                      ...||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....+....+..+..                ..    
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (330)
T 3nsz_A          189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF  268 (330)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred             cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence            5579999999999987 67899999999999999999999999654443332221100                00    


Q ss_pred             ---------------CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          220 ---------------DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       220 ---------------~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                     .....+..+++++++||.+||++||.+|||++|+|+||||+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  326 (330)
T 3nsz_A          269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  326 (330)
T ss_dssp             HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence                           0111223379999999999999999999999999999999864


No 78 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=4e-50  Score=385.67  Aligned_cols=255  Identities=27%  Similarity=0.401  Sum_probs=202.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHH----HHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSE----FLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~----~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|.+......    .+.+|+++|++++||||+++++++.....    +++|
T Consensus         3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~lv   78 (324)
T 3mtl_A            3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS----LTLV   78 (324)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC----EEEE
T ss_pred             ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE----EEEE
Confidence            699999999999999999999999999999998754332    34479999999999999999999876544    6799


Q ss_pred             EeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           78 LEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      |||++| +|.+++.. +..+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++...... 
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~-  154 (324)
T 3mtl_A           79 FEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE--LKLADFGLARAKSIPT-  154 (324)
T ss_dssp             EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCC--EEECSSSEEECC-----
T ss_pred             eccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCC--EEEccCcccccccCCc-
Confidence            999975 99998874 556999999999999999999999999999999999999987766  9999999998653222 


Q ss_pred             CCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh---cCCCCCCC---------
Q 040569          157 DEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI---GFSSDTPE---------  223 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~---~~~~~~~~---------  223 (385)
                      ......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.... ....+..+   ........         
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (324)
T 3mtl_A          155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST-VEEQLHFIFRILGTPTEETWPGILSNEE  233 (324)
T ss_dssp             --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred             cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChHhchhhhcchh
Confidence            22334578999999999977 568999999999999999999999998753 22222221   11111111         


Q ss_pred             ----------------CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccccc
Q 040569          224 ----------------IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQNFK  265 (385)
Q Consensus       224 ----------------~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~~~  265 (385)
                                      ....+++++++||.+||+.||.+|||++|+|+||||......
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence                            112468999999999999999999999999999999876433


No 79 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.1e-49  Score=372.91  Aligned_cols=251  Identities=25%  Similarity=0.400  Sum_probs=211.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC---CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL---SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++.+.||+|+||+||+|.++.++..+|+|.+..   ...+.+.+|++++++++||||+++++++.....    +++||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~   85 (277)
T 3f3z_A           10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTD----IYLVM   85 (277)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EEEEE
T ss_pred             hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCe----EEEEE
Confidence            48999999999999999999999999999998853   456788999999999999999999998765433    67999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC-CCCCeEEeecCceeeecccCCC
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD-NEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~-~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      ||++|++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||+..+ ....+||+|||++......  .
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~--~  163 (277)
T 3f3z_A           86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--K  163 (277)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT--S
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc--c
Confidence            999999999999877789999999999999999999999999999999999999321 1233999999999876432  2


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCC----CcCCHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIP----GYMSKQAQ  233 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~  233 (385)
                      ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||..... ......+....  ...+    ..+++++.
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~  239 (277)
T 3f3z_A          164 MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD-SEVMLKIREGT--FTFPEKDWLNVSPQAE  239 (277)
T ss_dssp             CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCC--CCCCHHHHTTSCHHHH
T ss_pred             chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCC--CCCCchhhhcCCHHHH
Confidence            33455799999999998765 89999999999999999999999987533 33333332211  1122    25799999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||.+||++||.+|||+.|+|+||||++.
T Consensus       240 ~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          240 SLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999999999999999764


No 80 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=2e-50  Score=396.04  Aligned_cols=252  Identities=27%  Similarity=0.376  Sum_probs=206.5

Q ss_pred             eeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            4 TRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      ...+.||+|+||+||+|.++.+|+.||+|++....   .+.+.+|+++|++++||||+++++++.....    +++||||
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~----~~lv~E~  167 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKND----IVLVMEY  167 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EEEEEEC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE----EEEEEeC
Confidence            34678999999999999999999999999987653   4568899999999999999999998765443    6799999


Q ss_pred             cCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCCC
Q 040569           81 APGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDEG  159 (385)
Q Consensus        81 ~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~  159 (385)
                      ++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+..+....+||+|||+++.....  ...
T Consensus       168 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~--~~~  245 (373)
T 2x4f_A          168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR--EKL  245 (373)
T ss_dssp             CTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT--CBC
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc--ccc
Confidence            999999998864 45699999999999999999999999999999999999996544445999999999876432  223


Q ss_pred             CccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC--CCCCCCCcCCHHHHHHHH
Q 040569          160 KPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS--DTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       160 ~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~ll~  237 (385)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ....+..+....  ..+.....+++++++||.
T Consensus       246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  324 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-DAETLNNILACRWDLEDEEFQDISEEAKEFIS  324 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred             ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence            44579999999999999999999999999999999999999998753 333333332111  112223458999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhCcccccc
Q 040569          238 KCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||++||.+|||+.|+|+||||...
T Consensus       325 ~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          325 KLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             HHcCCChhhCCCHHHHhcCcCcCCC
Confidence            9999999999999999999999865


No 81 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.3e-49  Score=407.08  Aligned_cols=255  Identities=25%  Similarity=0.370  Sum_probs=216.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||+|++..      ...+.+.+|.++|++++||||+++++++.....    +|
T Consensus       186 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~----l~  261 (543)
T 3c4z_A          186 WFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD----LC  261 (543)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EE
T ss_pred             heEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCE----EE
Confidence            58889999999999999999999999999998853      234667899999999999999999998765443    67


Q ss_pred             EEEeecCCCCHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           76 LFLEYAPGGTLTDAIRS----GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~----~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      +||||++||+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus       262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~--vkL~DFGla~~~  339 (543)
T 3c4z_A          262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN--VRISDLGLAVEL  339 (543)
T ss_dssp             EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCTTCEEC
T ss_pred             EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCC--EEEeecceeeec
Confidence            99999999999999974    346999999999999999999999999999999999999988776  999999999876


Q ss_pred             cccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHhcCCCCCCCCCCcC
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD---PISALHRIGFSSDTPEIPGYM  228 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~~~  228 (385)
                      .... ......+||+.|||||++.+..++.++|||||||++|||++|+.||.....   .......+.  .....+|..+
T Consensus       340 ~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~--~~~~~~p~~~  416 (543)
T 3c4z_A          340 KAGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL--EQAVTYPDKF  416 (543)
T ss_dssp             CTTC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH--HCCCCCCTTS
T ss_pred             cCCC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh--hcccCCCccc
Confidence            4322 123445899999999999999999999999999999999999999976432   223333332  2234566779


Q ss_pred             CHHHHHHHHHhhhcCCCCCCC-----HHHHHhCccccccccc
Q 040569          229 SKQAQDFLSKCLIRNPGERWS-----ASELLEHGFVKEQNFK  265 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps-----~~elL~hp~~~~~~~~  265 (385)
                      |+++++||.+||++||.+||+     ++++++||||+..++.
T Consensus       417 s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~  458 (543)
T 3c4z_A          417 SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR  458 (543)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHH
T ss_pred             CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHH
Confidence            999999999999999999996     5899999999987553


No 82 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=2.6e-50  Score=389.37  Aligned_cols=244  Identities=23%  Similarity=0.309  Sum_probs=210.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------SEFLQREQRILSALACPQIVAYKGCDISEENG   70 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   70 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....           .+.+.+|+.+|++++||||+++++++..... 
T Consensus        25 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~-  103 (335)
T 3dls_A           25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF-  103 (335)
T ss_dssp             HEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE-
T ss_pred             ceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE-
Confidence            4899999999999999999999999999999886542           2356689999999999999999998765432 


Q ss_pred             eEEEEEEEeecCCC-CHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           71 KILYNLFLEYAPGG-TLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        71 ~~~~~lv~Ey~~gg-sL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                         +++||||+.+| +|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++
T Consensus       104 ---~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~a~  178 (335)
T 3dls_A          104 ---FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFT--IKLIDFGSAA  178 (335)
T ss_dssp             ---EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCE
T ss_pred             ---EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCc--EEEeecccce
Confidence               66999999776 99999998888999999999999999999999999999999999999987765  9999999998


Q ss_pred             eecccCCCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcC
Q 040569          150 RARVNEDDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYM  228 (385)
Q Consensus       150 ~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (385)
                      .....  ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......         .......+..+
T Consensus       179 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~~~~~~~  247 (335)
T 3dls_A          179 YLERG--KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------VEAAIHPPYLV  247 (335)
T ss_dssp             ECCTT--CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------TTTCCCCSSCC
T ss_pred             ECCCC--CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------HhhccCCCccc
Confidence            76422  22345679999999999988876 78899999999999999999999753211         11223345568


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ++++++||.+||++||.+|||+.|+|+||||++.
T Consensus       248 ~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          248 SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            9999999999999999999999999999999753


No 83 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=4.2e-49  Score=393.70  Aligned_cols=260  Identities=25%  Similarity=0.350  Sum_probs=203.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--C---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC-CeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--N---SEFLQREQRILSALACPQIVAYKGCDISEEN-GKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++...  .   .+.+.+|+.+|++++||||+++++++..... ....+|
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~  106 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY  106 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence            599999999999999999999999999999998643  1   3567799999999999999999998765431 112266


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+. |+|.++++....+++..++.++.||+.||+|||++||+||||||+||||+.++.  +||+|||+|+......
T Consensus       107 lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~--~kL~DFGla~~~~~~~  183 (432)
T 3n9x_A          107 IVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCS--VKVCDFGLARTINSEK  183 (432)
T ss_dssp             EEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEEC----
T ss_pred             EEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCC--EEEccCCCcccccccc
Confidence            9999996 599999998888999999999999999999999999999999999999987766  9999999998764322


Q ss_pred             C---------------------CCCCccccCCcccChhhh-cCCCCCCCCChHHHHHHHHHHHhCC-----------CCC
Q 040569          156 D---------------------DEGKPICGTPICMAPEVA-RGEEQGFPADVWALGCTVLEMATGR-----------PPW  202 (385)
Q Consensus       156 ~---------------------~~~~~~~Gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltG~-----------~Pf  202 (385)
                      .                     ......+||+.|+|||++ .+..++.++|||||||++|||++|.           ++|
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f  263 (432)
T 3n9x_A          184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLF  263 (432)
T ss_dssp             ---------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSC
T ss_pred             cccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccC
Confidence            1                     123566899999999986 5667999999999999999999854           444


Q ss_pred             CCCCC----------------hHHHHHHh------------------------cCCCCCCC-----CCCcCCHHHHHHHH
Q 040569          203 PDVAD----------------PISALHRI------------------------GFSSDTPE-----IPGYMSKQAQDFLS  237 (385)
Q Consensus       203 ~~~~~----------------~~~~~~~~------------------------~~~~~~~~-----~~~~~s~~~~~ll~  237 (385)
                      .+...                ....+..+                        ........     ....+++++.+||.
T Consensus       264 ~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~  343 (432)
T 3n9x_A          264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLE  343 (432)
T ss_dssp             CCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred             CCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence            33210                01111110                        00000000     11347999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhCcccccccc
Q 040569          238 KCLIRNPGERWSASELLEHGFVKEQNF  264 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~hp~~~~~~~  264 (385)
                      +||+.||.+|||++|+|+||||+....
T Consensus       344 ~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          344 SMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             HHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             HHhcCCcccCCCHHHHhcChhhhhccC
Confidence            999999999999999999999987643


No 84 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=5.7e-50  Score=387.58  Aligned_cols=252  Identities=27%  Similarity=0.440  Sum_probs=209.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCC--CCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALAC--PQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~h--pnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|.+. +++.||||.+....     .+.+.+|+.+|+++.|  |||+++++++....    .+
T Consensus        10 ~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~----~~   84 (343)
T 3dbq_A           10 IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----YI   84 (343)
T ss_dssp             EEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----EE
T ss_pred             EEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC----EE
Confidence            4899999999999999999984 68999999886432     2567899999999976  99999999876544    26


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++|||| .+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ ++.  +||+|||+++.....
T Consensus        85 ~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~--~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           85 YMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGM--LKLIDFGIANQMQPD  160 (343)
T ss_dssp             EEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTE--EEECCCSSSCCC---
T ss_pred             EEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCc--EEEeecccccccCcc
Confidence            799995 5789999999888899999999999999999999999999999999999997 333  999999999876433


Q ss_pred             CCC-CCCccccCCcccChhhhcC-----------CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCC
Q 040569          155 EDD-EGKPICGTPICMAPEVARG-----------EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTP  222 (385)
Q Consensus       155 ~~~-~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  222 (385)
                      ... .....+||+.|+|||++.+           ..++.++|||||||++|+|++|+.||....+....+..+.......
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  240 (343)
T 3dbq_A          161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  240 (343)
T ss_dssp             ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred             cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc
Confidence            221 2335579999999999965           6678899999999999999999999987766666666655555556


Q ss_pred             CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          223 EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       223 ~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .++...++++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            6777788999999999999999999999999999999754


No 85 
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.2e-50  Score=390.12  Aligned_cols=255  Identities=26%  Similarity=0.458  Sum_probs=213.6

Q ss_pred             CceeeceeeccCceEEEEEEEC---CCCcEEEEEeccCC-------CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN---RSSEVFAVKSAELS-------NSEFLQREQRILSAL-ACPQIVAYKGCDISEENG   70 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~~AvK~~~~~-------~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~   70 (385)
                      +|++++.||+|+||+||+|++.   .+++.||||++...       ..+.+.+|+++|+++ .||||+++++++..... 
T Consensus        55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~-  133 (355)
T 1vzo_A           55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK-  133 (355)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE-
T ss_pred             ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce-
Confidence            5899999999999999999984   58999999988532       345677899999999 79999999998766543 


Q ss_pred             eEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceee
Q 040569           71 KILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARR  150 (385)
Q Consensus        71 ~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~  150 (385)
                         +++||||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++.
T Consensus       134 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a~~  208 (355)
T 1vzo_A          134 ---LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH--VVLTDFGLSKE  208 (355)
T ss_dssp             ---EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEESCSSEEEE
T ss_pred             ---EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCc--EEEeeCCCCee
Confidence               6799999999999999997778999999999999999999999999999999999999987766  99999999987


Q ss_pred             ecccCCCCCCccccCCcccChhhhcCC--CCCCCCChHHHHHHHHHHHhCCCCCCCCC---ChHHHHHHhcCCCCCCCCC
Q 040569          151 ARVNEDDEGKPICGTPICMAPEVARGE--EQGFPADVWALGCTVLEMATGRPPWPDVA---DPISALHRIGFSSDTPEIP  225 (385)
Q Consensus       151 ~~~~~~~~~~~~~Gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltG~~Pf~~~~---~~~~~~~~~~~~~~~~~~~  225 (385)
                      ............+||+.|+|||++.+.  .++.++|||||||++|+|++|+.||....   ........+.  ...+.++
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~  286 (355)
T 1vzo_A          209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYP  286 (355)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCC
T ss_pred             cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh--ccCCCCC
Confidence            644333334456899999999999863  47889999999999999999999997432   2222222221  2234566


Q ss_pred             CcCCHHHHHHHHHhhhcCCCCCC-----CHHHHHhCcccccccc
Q 040569          226 GYMSKQAQDFLSKCLIRNPGERW-----SASELLEHGFVKEQNF  264 (385)
Q Consensus       226 ~~~s~~~~~ll~~cL~~dP~~Rp-----s~~elL~hp~~~~~~~  264 (385)
                      ..+++.+++||.+||.+||.+||     |+.|+++||||...++
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~  330 (355)
T 1vzo_A          287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  330 (355)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence            77899999999999999999999     9999999999987654


No 86 
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1e-49  Score=393.18  Aligned_cols=252  Identities=27%  Similarity=0.442  Sum_probs=209.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcC--CCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALA--CPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|.+.. ++.||||.+....     .+.+.+|+.+|+++.  ||||+++++++.....    +
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~----~  131 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY----I  131 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE----E
T ss_pred             ceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE----E
Confidence            38999999999999999999865 9999999886432     256789999999996  5999999998765443    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||| +.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++ ++  .+||+|||+++.....
T Consensus       132 ~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~--~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          132 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG--MLKLIDFGIANQMQPD  207 (390)
T ss_dssp             EEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SS--CEEECCCSSSCCC---
T ss_pred             EEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CC--eEEEEecCccccccCC
Confidence            79999 56789999999888899999999999999999999999999999999999995 33  3999999999876433


Q ss_pred             CCC-CCCccccCCcccChhhhcC-----------CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCC
Q 040569          155 EDD-EGKPICGTPICMAPEVARG-----------EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTP  222 (385)
Q Consensus       155 ~~~-~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  222 (385)
                      ... .....+||+.|||||++.+           ..++.++|||||||++|+|++|+.||....+....+..+.......
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~  287 (390)
T 2zmd_A          208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  287 (390)
T ss_dssp             ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred             CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence            221 2345679999999999975           3678899999999999999999999987666655555554444455


Q ss_pred             CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          223 EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       223 ~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .++...++++++||.+||++||.+|||+.|+|+||||+..
T Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            5677779999999999999999999999999999999754


No 87 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=2.5e-50  Score=384.55  Aligned_cols=258  Identities=27%  Similarity=0.410  Sum_probs=210.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------SEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+....      ...+.+|+.++++++||||+++++++..........+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            5999999999999999999999999999999986532      2357799999999999999999999877666555568


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++||+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus        93 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~  170 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA--VKVMDFGIARAIADSG  170 (311)
T ss_dssp             EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSC--EEECCCSCC-------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCC--EEEeeccCcccccccc
Confidence            99999999999999997778999999999999999999999999999999999999987766  9999999998754322


Q ss_pred             C--CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCC--CCCCcCCHH
Q 040569          156 D--DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTP--EIPGYMSKQ  231 (385)
Q Consensus       156 ~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~  231 (385)
                      .  ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ..............+  ..+..++++
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-PVSVAYQHVREDPIPPSARHEGLSAD  249 (311)
T ss_dssp             -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHCCCCCHHHHSTTCCHH
T ss_pred             cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcCCCCCcccccCCCCHH
Confidence            2  12334579999999999999999999999999999999999999998753 333322222222111  123458999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          232 AQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       232 ~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +.+||.+||++||.+||++.++|.|+|++..
T Consensus       250 l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            9999999999999999999999999998753


No 88 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.7e-49  Score=404.03  Aligned_cols=253  Identities=24%  Similarity=0.342  Sum_probs=212.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC----------------CHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS----------------NSEFLQREQRILSALACPQIVAYKGCDI   65 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~----------------~~~~~~~E~~il~~l~hpnIv~~~~~~~   65 (385)
                      +|++++.||+|+||+||+|+++.+++.+|+|.+...                ..+.+.+|+.+|++++||||+++++++.
T Consensus        37 ~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  116 (504)
T 3q5i_A           37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE  116 (504)
T ss_dssp             TEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            589999999999999999999999999999988642                2356889999999999999999999986


Q ss_pred             eccCCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCC-CeEEee
Q 040569           66 SEENGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQ-GAKIAD  144 (385)
Q Consensus        66 ~~~~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~-~~kL~D  144 (385)
                      ....    +++|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.. .+||+|
T Consensus       117 ~~~~----~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          117 DKKY----FYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             CSSE----EEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             cCCE----EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            5433    67999999999999999877789999999999999999999999999999999999999876532 489999


Q ss_pred             cCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCC-
Q 040569          145 FGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPE-  223 (385)
Q Consensus       145 FG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-  223 (385)
                      ||+++.....  ......+||+.|+|||++.+ .++.++|||||||++|+|++|++||... +....+..+........ 
T Consensus       193 fg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~  268 (504)
T 3q5i_A          193 FGLSSFFSKD--YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ-NDQDIIKKVEKGKYYFDF  268 (504)
T ss_dssp             CTTCEECCTT--SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCH
T ss_pred             CCCCEEcCCC--CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCc
Confidence            9999876432  23345679999999999874 5899999999999999999999999874 34444444432221111 


Q ss_pred             -CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          224 -IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       224 -~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                       ....+|+++++||.+||++||.+|||+.|+|+||||+..
T Consensus       269 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          269 NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred             cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence             124589999999999999999999999999999999764


No 89 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.4e-49  Score=403.51  Aligned_cols=253  Identities=27%  Similarity=0.366  Sum_probs=210.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      .|++++.||+|+||+||+|+++.++..+|+|.+...     ....+.+|+.+|++++||||+++++++.....    +++
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~l  113 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRN----YYL  113 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EEE
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE----EEE
Confidence            389999999999999999999999999999988643     34678899999999999999999999865443    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~DFG~a~~~~~~~  155 (385)
                      |||||+||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++..+. ..+||+|||+++..... 
T Consensus       114 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~-  192 (494)
T 3lij_A          114 VMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-  192 (494)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-
Confidence            9999999999999987778999999999999999999999999999999999999976432 34899999999876432 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCC--CCCCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTP--EIPGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~  233 (385)
                       ......+||+.|+|||++. ..++.++|||||||++|+|++|++||... .....+..+.......  .....+|++++
T Consensus       193 -~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  269 (494)
T 3lij_A          193 -KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ-TDQEILRKVEKGKYTFDSPEWKNVSEGAK  269 (494)
T ss_dssp             -BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCSGGGTTSCHHHH
T ss_pred             -ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCchhcccCCHHHH
Confidence             2334567999999999986 46899999999999999999999999875 3344444432222111  12245899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||.+||++||.+|||+.|+|+||||+..
T Consensus       270 ~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          270 DLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            99999999999999999999999999864


No 90 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1e-49  Score=373.37  Aligned_cols=251  Identities=29%  Similarity=0.530  Sum_probs=190.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|.+..+++.||+|.+...      ..+.+.+|+.++++++||||+++++++.....    .+
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~   87 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY----VY   87 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSE----EE
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCe----EE
Confidence            589999999999999999999999999999988532      24678899999999999999999998765432    66


Q ss_pred             EEEeecCCCCHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           76 LFLEYAPGGTLTDAIRSG-TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~-~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      +||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.  +||+|||++......
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~--~kl~dfg~~~~~~~~  165 (278)
T 3cok_A           88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN--IKIADFGLATQLKMP  165 (278)
T ss_dssp             EEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCC--EEECCCTTCEECC--
T ss_pred             EEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC--EEEEeecceeeccCC
Confidence            999999999999999854 67999999999999999999999999999999999999987766  999999999876422


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                      .. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+.  ......+..++.++++
T Consensus       166 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~  241 (278)
T 3cok_A          166 HE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-NTLNKVV--LADYEMPSFLSIEAKD  241 (278)
T ss_dssp             ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CC--SSCCCCCTTSCHHHHH
T ss_pred             CC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-HHHHHHh--hcccCCccccCHHHHH
Confidence            22 223457999999999999999999999999999999999999999764322 2222221  1223456678999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||.+||+.||.+|||+.++|+||||...
T Consensus       242 li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          242 LIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             HHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            9999999999999999999999999754


No 91 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=5.4e-50  Score=403.84  Aligned_cols=253  Identities=26%  Similarity=0.365  Sum_probs=200.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccC--CeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-----NSEFLQREQRILSALACPQIVAYKGCDISEEN--GKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++...     ..+.+.+|+.+|+.++||||+++++++.....  ....+
T Consensus        63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  142 (464)
T 3ttj_A           63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV  142 (464)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence            588999999999999999999999999999998643     23567799999999999999999999865432  12236


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||+.+ +|.+.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+|+.... 
T Consensus       143 ~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~-  216 (464)
T 3ttj_A          143 YLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGT-  216 (464)
T ss_dssp             EEEEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCCCC------
T ss_pred             EEEEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCC--EEEEEEEeeeecCC-
Confidence            799999976 57777754  3899999999999999999999999999999999999998766  99999999987632 


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC--C-------------
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS--S-------------  219 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~--~-------------  219 (385)
                       .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.. ....+..+...  .             
T Consensus       217 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~-~~~~~~~i~~~lg~p~~~~~~~~~~~~  294 (464)
T 3ttj_A          217 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTV  294 (464)
T ss_dssp             -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred             -CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence             223455689999999999999999999999999999999999999998753 33322222100  0             


Q ss_pred             -----CCCCC---------CCc-----------CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          220 -----DTPEI---------PGY-----------MSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       220 -----~~~~~---------~~~-----------~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                           ..+..         +..           .++++++||.+||++||.+|||++|+|+||||+..
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence                 00000         000           15679999999999999999999999999999853


No 92 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=5.1e-50  Score=405.46  Aligned_cols=253  Identities=28%  Similarity=0.410  Sum_probs=214.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||++..      ...+.+.+|+.+|++++||||+++++++.....    ++
T Consensus        27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~  102 (484)
T 3nyv_A           27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY----FY  102 (484)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE----EE
T ss_pred             ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE----EE
Confidence            48899999999999999999999999999998853      245778899999999999999999998765432    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC-CCCCeEEeecCceeeeccc
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD-NEQGAKIADFGCARRARVN  154 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~-~~~~~kL~DFG~a~~~~~~  154 (385)
                      +||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.. ....+||+|||+++.....
T Consensus       103 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             EEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence            999999999999999988889999999999999999999999999999999999999532 2234899999999865322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCC--CCcCCHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEI--PGYMSKQA  232 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~  232 (385)
                        ......+||+.|+|||++.+ .++.++|||||||++|+|++|++||... +....+..+.........  ...+|+++
T Consensus       183 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~  258 (484)
T 3nyv_A          183 --KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESA  258 (484)
T ss_dssp             --CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGGGGGSCHHH
T ss_pred             --cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCCCCcccccCCHHH
Confidence              22344579999999999977 6899999999999999999999999874 444444444333222222  24589999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          233 QDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       233 ~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ++||.+||++||.+|||+.|+|+||||+..
T Consensus       259 ~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          259 KDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence            999999999999999999999999999864


No 93 
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=1.7e-50  Score=402.37  Aligned_cols=255  Identities=28%  Similarity=0.479  Sum_probs=204.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------SEFLQREQRILSALACPQIVAYKGCDISEENG   70 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   70 (385)
                      +|++.+.||+|+||+||+|.++.+++.||||.+....           ...+.+|+.+|++++||||+++++++...   
T Consensus       136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---  212 (419)
T 3i6u_A          136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---  212 (419)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---
T ss_pred             cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence            5899999999999999999999999999999875421           12477999999999999999999986322   


Q ss_pred             eEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEeecCcee
Q 040569           71 KILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIADFGCAR  149 (385)
Q Consensus        71 ~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~DFG~a~  149 (385)
                      .  +++||||+++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++. ..+||+|||+++
T Consensus       213 ~--~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          213 D--YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             E--EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             c--eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence            2  5699999999999999988888999999999999999999999999999999999999975432 348999999998


Q ss_pred             eecccCCCCCCccccCCcccChhhhcC---CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC--CCCCCCC
Q 040569          150 RARVNEDDEGKPICGTPICMAPEVARG---EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF--SSDTPEI  224 (385)
Q Consensus       150 ~~~~~~~~~~~~~~Gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~  224 (385)
                      ....  .......+||+.|+|||++.+   ..++.++|||||||++|+|++|+.||............+..  ....+..
T Consensus       291 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~  368 (419)
T 3i6u_A          291 ILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV  368 (419)
T ss_dssp             SCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHH
T ss_pred             ecCC--CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchh
Confidence            7632  223345689999999999864   56778999999999999999999999765433222222211  1122223


Q ss_pred             CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          225 PGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       225 ~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      ...+++.+++||.+||++||.+|||++|+|+||||+...
T Consensus       369 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence            345899999999999999999999999999999998653


No 94 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1e-49  Score=403.76  Aligned_cols=253  Identities=26%  Similarity=0.393  Sum_probs=212.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC-----CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL-----SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~-----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++..     .....+.+|+++|++++||||+++++++.....    +++
T Consensus        23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~l   98 (486)
T 3mwu_A           23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS----FYI   98 (486)
T ss_dssp             HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE----EEE
T ss_pred             ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE----EEE
Confidence            48999999999999999999999999999998742     346778899999999999999999998765433    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||+.||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++..+ ...+||+|||+++..... 
T Consensus        99 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-  177 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-  177 (486)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC-
Confidence            999999999999998777899999999999999999999999999999999999996533 234899999999865322 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCC--CCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEI--PGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~  233 (385)
                       ......+||+.|+|||++.+ .++.++|||||||++|+|++|++||... +....+..+.........  ...+|++++
T Consensus       178 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  254 (486)
T 3mwu_A          178 -TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAK  254 (486)
T ss_dssp             -----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCSCSGGGGGSCHHHH
T ss_pred             -CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCCcccCCCCHHHH
Confidence             23345579999999999986 4889999999999999999999999874 344444444322222222  245899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||.+||++||.+|||+.|+|+||||+..
T Consensus       255 ~li~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          255 DLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence            99999999999999999999999999764


No 95 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=2.3e-49  Score=384.90  Aligned_cols=249  Identities=25%  Similarity=0.336  Sum_probs=204.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcC-----CCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALA-----CPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~-----hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|++..+++.||||++....  .....+|+.+++.+.     ||||+++++++.....    +
T Consensus        36 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~----~  111 (360)
T 3llt_A           36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH----M  111 (360)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE----E
T ss_pred             EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe----e
Confidence            5899999999999999999999999999999987533  346678999999996     9999999998876543    6


Q ss_pred             EEEEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC-----------------
Q 040569           75 NLFLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD-----------------  135 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~-----------------  135 (385)
                      ++||||+ +++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++..                 
T Consensus       112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~  190 (360)
T 3llt_A          112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKK  190 (360)
T ss_dssp             EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccc
Confidence            7999999 89999999854  359999999999999999999999999999999999999751                 


Q ss_pred             ------CCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChH
Q 040569          136 ------NEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPI  209 (385)
Q Consensus       136 ------~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~  209 (385)
                            ....+||+|||+++....    ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... 
T Consensus       191 ~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-  265 (360)
T 3llt_A          191 IQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM-  265 (360)
T ss_dssp             EEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred             ccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHH-
Confidence                  133499999999986432    234557999999999999999999999999999999999999999764322 


Q ss_pred             HHHHHh-cCCCCCC-------------------------------------------CCCCcCCHHHHHHHHHhhhcCCC
Q 040569          210 SALHRI-GFSSDTP-------------------------------------------EIPGYMSKQAQDFLSKCLIRNPG  245 (385)
Q Consensus       210 ~~~~~~-~~~~~~~-------------------------------------------~~~~~~s~~~~~ll~~cL~~dP~  245 (385)
                      ..+..+ ......+                                           ..+...++.+.+||.+||++||.
T Consensus       266 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  345 (360)
T 3llt_A          266 EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPT  345 (360)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChh
Confidence            222111 0000000                                           00112347888999999999999


Q ss_pred             CCCCHHHHHhCcccc
Q 040569          246 ERWSASELLEHGFVK  260 (385)
Q Consensus       246 ~Rps~~elL~hp~~~  260 (385)
                      +|||+.|+|+||||+
T Consensus       346 ~Rpta~elL~hp~f~  360 (360)
T 3llt_A          346 LRPSPAELLKHKFLE  360 (360)
T ss_dssp             GSCCHHHHTTSGGGC
T ss_pred             hCCCHHHHhcCcccC
Confidence            999999999999985


No 96 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-49  Score=387.46  Aligned_cols=252  Identities=27%  Similarity=0.384  Sum_probs=203.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC--CeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEEN--GKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~~~~   74 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||||.+....     .+.+.+|+++|++++||||+++++++.....  ....+
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  105 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF  105 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence            5899999999999999999999999999999985421     3456799999999999999999998865432  11225


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||+ |++|.++++.+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.... 
T Consensus       106 ~lv~e~~-~~~L~~~~~~~-~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~-  180 (367)
T 1cm8_A          106 YLVMPFM-GTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE--LKILDFGLARQADS-  180 (367)
T ss_dssp             EEEEECC-SEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCS-
T ss_pred             EEEEecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCC--EEEEeeeccccccc-
Confidence            6999999 88999999874 5999999999999999999999999999999999999987766  99999999987532 


Q ss_pred             CCCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC----------------
Q 040569          155 EDDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF----------------  217 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~----------------  217 (385)
                         .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.... ....+..+..                
T Consensus       181 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~  256 (367)
T 1cm8_A          181 ---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD-HLDQLKEIMKVTGTPPAEFVQRLQSD  256 (367)
T ss_dssp             ---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             ---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHHHHHHhhhH
Confidence               2345679999999999987 678999999999999999999999998643 2222222100                


Q ss_pred             -------------CCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          218 -------------SSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       218 -------------~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                   ......+....++++.+||.+||..||.+|||+.|+|+||||+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence                         011112334579999999999999999999999999999999864


No 97 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.8e-49  Score=378.39  Aligned_cols=255  Identities=27%  Similarity=0.398  Sum_probs=203.8

Q ss_pred             Cceee-ceeeccCceEEEEEEECCCCcEEEEEeccCC---CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRG-QTIGRGSTATVSIGMSNRSSEVFAVKSAELS---NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~-~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      .|++. +.||+|+||+||+|+++.+++.||||++...   ..+.+.+|+++|+++ .||||+++++++.....    +++
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~----~~l   88 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR----FYL   88 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE----EEE
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE----EEE
Confidence            37774 7899999999999999999999999998653   356788999999995 79999999999876543    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||++||+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++. ..+||+|||++.......
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  168 (316)
T 2ac3_A           89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG  168 (316)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred             EEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence            9999999999999987778999999999999999999999999999999999999986543 238999999987653221


Q ss_pred             C------CCCCccccCCcccChhhhcC-----CCCCCCCChHHHHHHHHHHHhCCCCCCCCCCh--------------HH
Q 040569          156 D------DEGKPICGTPICMAPEVARG-----EEQGFPADVWALGCTVLEMATGRPPWPDVADP--------------IS  210 (385)
Q Consensus       156 ~------~~~~~~~Gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--------------~~  210 (385)
                      .      ......+||+.|+|||++.+     ..++.++|||||||++|+|++|+.||......              ..
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  248 (316)
T 2ac3_A          169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM  248 (316)
T ss_dssp             -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred             ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence            1      11234569999999999975     56889999999999999999999999764321              11


Q ss_pred             HHHHhcCCCCCCCCC----CcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          211 ALHRIGFSSDTPEIP----GYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       211 ~~~~~~~~~~~~~~~----~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ....+...  ...++    ..+++++++||.+||++||.+|||+.|+|+||||+..
T Consensus       249 ~~~~i~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          249 LFESIQEG--KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             HHHHHHHC--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             HHHHHhcc--CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            12222111  11222    3478999999999999999999999999999999864


No 98 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=2.7e-49  Score=377.78  Aligned_cols=246  Identities=26%  Similarity=0.314  Sum_probs=199.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--H---HHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--S---EFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~---~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||++....  .   ....+|+..+.++ .||||+++++++.....    ++
T Consensus        58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~----~~  133 (311)
T 3p1a_A           58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI----LY  133 (311)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----EE
T ss_pred             heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE----EE
Confidence            3889999999999999999999999999999875422  1   2333455555555 99999999998865433    67


Q ss_pred             EEEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           76 LFLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      +||||+ +++|.+++. .+..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++......
T Consensus       134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR--CKLGDFGLLVELGTA  210 (311)
T ss_dssp             EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGC--EEECCCTTCEECC--
T ss_pred             EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCC--EEEccceeeeecccC
Confidence            999999 669999887 4557999999999999999999999999999999999999987766  999999999876322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                        .......||+.|+|||++.+ .++.++|||||||++|||++|..|+... +.   ...+......+.++..+++++.+
T Consensus       211 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~l~~  283 (311)
T 3p1a_A          211 --GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-EG---WQQLRQGYLPPEFTAGLSSELRS  283 (311)
T ss_dssp             ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-HH---HHHHTTTCCCHHHHTTSCHHHHH
T ss_pred             --CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-cH---HHHHhccCCCcccccCCCHHHHH
Confidence              22344569999999999986 6899999999999999999997766432 11   22222222333455668999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      ||.+||++||.+|||+.|+|+||||++
T Consensus       284 li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          284 VLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHcCCChhhCcCHHHHHhCccccC
Confidence            999999999999999999999999974


No 99 
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.5e-49  Score=372.93  Aligned_cols=255  Identities=28%  Similarity=0.455  Sum_probs=212.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---------NSEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|+++.+++.+|+|.+...         ..+.+.+|+.++++++||||+++++++.....   
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---   82 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD---   82 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE---
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe---
Confidence            489999999999999999999999999999987643         25778999999999999999999998765432   


Q ss_pred             EEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC--CCeEEeecCceee
Q 040569           73 LYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE--QGAKIADFGCARR  150 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~--~~~kL~DFG~a~~  150 (385)
                       +++||||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+||+++.++.  ..+||+|||++..
T Consensus        83 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           83 -VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             -EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             -EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence             6799999999999999987778999999999999999999999999999999999999986652  2489999999987


Q ss_pred             ecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC--CCCCCCCcC
Q 040569          151 ARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS--DTPEIPGYM  228 (385)
Q Consensus       151 ~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~  228 (385)
                      .....  ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ....+..+....  ..+..+..+
T Consensus       162 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T 3bhy_A          162 IEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-KQETLTNISAVNYDFDEEYFSNT  238 (283)
T ss_dssp             CC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTTCCCCCHHHHTTC
T ss_pred             ccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-hHHHHHHhHhcccCCcchhcccC
Confidence            63322  2334569999999999999999999999999999999999999998743 333333332211  111223457


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      ++.+.+||.+||..||.+|||+.|+|+||||+...
T Consensus       239 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            89999999999999999999999999999998653


No 100
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=6.8e-50  Score=392.87  Aligned_cols=255  Identities=27%  Similarity=0.410  Sum_probs=206.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeeeeeeeeeecc-------------
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQIVAYKGCDISEE-------------   68 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-------------   68 (385)
                      +|++++.||+|+||+||+|++..+|+.||||++..+ .....+|+++|+.++||||+++++++....             
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~   86 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD-PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDH   86 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC-TTSCCHHHHHHTTCCCTTBCCEEEEEEEC--------------
T ss_pred             eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHHcCCCCccchhheeeecCccccccccccccc
Confidence            699999999999999999999999999999988643 333458999999999999999999886543             


Q ss_pred             ---------------------CCeEEEEEEEeecCCCCHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 040569           69 ---------------------NGKILYNLFLEYAPGGTLTDAIR----SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHC  123 (385)
Q Consensus        69 ---------------------~~~~~~~lv~Ey~~ggsL~~~l~----~~~~l~e~~~~~i~~qil~gL~yLH~~givHr  123 (385)
                                           ....++++||||++| +|.+.+.    .+..+++..++.++.||+.||+|||++||+||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~  165 (383)
T 3eb0_A           87 NKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHR  165 (383)
T ss_dssp             -----------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECS
T ss_pred             ccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccC
Confidence                                 223346799999985 7776664    46779999999999999999999999999999


Q ss_pred             cCCCCCEEeec-CCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCC
Q 040569          124 DIKGQNILVSK-DNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPP  201 (385)
Q Consensus       124 DlKp~NILi~~-~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~P  201 (385)
                      ||||+|||++. ++.  +||+|||+++.....  .......||+.|+|||++.+. .++.++|||||||++|+|++|+.|
T Consensus       166 Dikp~Nil~~~~~~~--~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  241 (383)
T 3eb0_A          166 DIKPQNLLVNSKDNT--LKLCDFGSAKKLIPS--EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL  241 (383)
T ss_dssp             CCCGGGEEEETTTTE--EEECCCTTCEECCTT--SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCHHHEEEcCCCCc--EEEEECCCCcccCCC--CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence            99999999974 443  999999999876432  233455789999999999875 489999999999999999999999


Q ss_pred             CCCCCChHHHHHHhcC------------------CCCCC---------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHH
Q 040569          202 WPDVADPISALHRIGF------------------SSDTP---------EIPGYMSKQAQDFLSKCLIRNPGERWSASELL  254 (385)
Q Consensus       202 f~~~~~~~~~~~~~~~------------------~~~~~---------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL  254 (385)
                      |...... ..+..+..                  ....+         .++..+++++.+||.+||+.||.+|||+.|+|
T Consensus       242 f~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  320 (383)
T 3eb0_A          242 FSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM  320 (383)
T ss_dssp             SCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             CCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            9875332 22222210                  00001         13456899999999999999999999999999


Q ss_pred             hCccccccc
Q 040569          255 EHGFVKEQN  263 (385)
Q Consensus       255 ~hp~~~~~~  263 (385)
                      +||||+...
T Consensus       321 ~hp~f~~~~  329 (383)
T 3eb0_A          321 AHPFFDHLR  329 (383)
T ss_dssp             TSGGGHHHH
T ss_pred             cCHHHHHHH
Confidence            999998653


No 101
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.5e-49  Score=372.20  Aligned_cols=251  Identities=30%  Similarity=0.483  Sum_probs=215.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|.++.+++.+|+|.+...      ..+.+.+|+.+++++.||||+++++++.....    ++
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~   91 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF----VF   91 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EE
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCE----EE
Confidence            489999999999999999999999999999987543      23567889999999999999999998765432    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+++++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++.......
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE--VKIGDFGLATKVEYDG  169 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCSTT
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCC--EEEEeccCceecccCc
Confidence            99999999999999987778999999999999999999999999999999999999987766  9999999998764222


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                       .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... .......+.  .....++..+++.+.+|
T Consensus       170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~l  245 (294)
T 2rku_A          170 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-LKETYLRIK--KNEYSIPKHINPVAASL  245 (294)
T ss_dssp             -CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHH--TTCCCCCTTSCHHHHHH
T ss_pred             -cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHh--hccCCCccccCHHHHHH
Confidence             22344579999999999999999999999999999999999999997643 333333332  22344567789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||+.||.+|||+.|+++||||...
T Consensus       246 i~~~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          246 IQKMLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             HHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHHHcccChhhCcCHHHHhhChheecC
Confidence            999999999999999999999999754


No 102
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=4.3e-49  Score=385.13  Aligned_cols=250  Identities=28%  Similarity=0.435  Sum_probs=210.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------SEFLQREQRILSAL-ACPQIVAYKGCDISEEN   69 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~   69 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||||++....           .+.+.+|+.+++++ .||||+++++++.....
T Consensus        95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  174 (365)
T 2y7j_A           95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF  174 (365)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred             hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence            4888999999999999999999999999999886543           34577899999999 89999999998765432


Q ss_pred             CeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           70 GKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        70 ~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                          .++||||++|++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++.
T Consensus       175 ----~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~--ikl~DfG~~~  248 (365)
T 2y7j_A          175 ----MFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQ--IRLSDFGFSC  248 (365)
T ss_dssp             ----EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCE
T ss_pred             ----EEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEEEecCccc
Confidence                6699999999999999997778999999999999999999999999999999999999987766  9999999998


Q ss_pred             eecccCCCCCCccccCCcccChhhhcC------CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCC
Q 040569          150 RARVNEDDEGKPICGTPICMAPEVARG------EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPE  223 (385)
Q Consensus       150 ~~~~~~~~~~~~~~Gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~  223 (385)
                      .....  ......+||+.|+|||++.+      ..++.++|||||||++|+|++|+.||... +....+..+........
T Consensus       249 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~  325 (365)
T 2y7j_A          249 HLEPG--EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR-RQILMLRMIMEGQYQFS  325 (365)
T ss_dssp             ECCTT--CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCC
T ss_pred             ccCCC--cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCCCCCC
Confidence            76432  23345679999999999863      35788999999999999999999999764 33333333322211111


Q ss_pred             --CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccc
Q 040569          224 --IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVK  260 (385)
Q Consensus       224 --~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~  260 (385)
                        ....+++.+.+||.+||+.||.+|||+.|+|+||||+
T Consensus       326 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          326 SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence              1235789999999999999999999999999999986


No 103
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=3.5e-49  Score=380.88  Aligned_cols=251  Identities=30%  Similarity=0.479  Sum_probs=215.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||++.++.+++.+|+|.+...      ..+.+.+|+.+++++.||||+++++++.....    ++
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~  117 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF----VF  117 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EE
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe----EE
Confidence            589999999999999999999999999999988543      23567899999999999999999998765432    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus       118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE--VKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECCSTT
T ss_pred             EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCC--EEEeeccCceecccCc
Confidence            99999999999999987778999999999999999999999999999999999999987766  9999999998764222


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                       .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+..  ....++..+++++.+|
T Consensus       196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~l  271 (335)
T 2owb_A          196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-LKETYLRIKK--NEYSIPKHINPVAASL  271 (335)
T ss_dssp             -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHH--TCCCCCTTSCHHHHHH
T ss_pred             -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHhc--CCCCCCccCCHHHHHH
Confidence             22345579999999999999999999999999999999999999997643 3333333221  2234566789999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||+.||.+|||+.|+|+||||...
T Consensus       272 i~~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          272 IQKMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             HHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHHHccCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999999999764


No 104
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=6.4e-49  Score=374.30  Aligned_cols=253  Identities=31%  Similarity=0.544  Sum_probs=212.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||+|.+... ..+.+.+|+.+++++.||||+++++++.....    +++||||
T Consensus        30 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e~  105 (314)
T 3com_A           30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTD----LWIVMEY  105 (314)
T ss_dssp             CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTE----EEEEEEC
T ss_pred             hhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE----EEEEeec
Confidence            589999999999999999999999999999988654 35678899999999999999999998876443    6799999


Q ss_pred             cCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCCC
Q 040569           81 APGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDEG  159 (385)
Q Consensus        81 ~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~  159 (385)
                      +++++|.+++. ....+++..+..++.||+.||.|||++|++||||||+||+++.++.  +||+|||++........ ..
T Consensus       106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~~~~~~~~-~~  182 (314)
T 3com_A          106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH--AKLADFGVAGQLTDTMA-KR  182 (314)
T ss_dssp             CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC--EEECCCTTCEECBTTBS-CB
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCC--EEEeecccchhhhhhcc-cc
Confidence            99999999997 5667999999999999999999999999999999999999987766  99999999987643222 23


Q ss_pred             CccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-cCCCCCCCCCCcCCHHHHHHHHH
Q 040569          160 KPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI-GFSSDTPEIPGYMSKQAQDFLSK  238 (385)
Q Consensus       160 ~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~ll~~  238 (385)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+ .........+..+++.+.+||.+
T Consensus       183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  261 (314)
T 3com_A          183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-RAIFMIPTNPPPTFRKPELWSDNFTDFVKQ  261 (314)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCcccCCcccCCHHHHHHHHH
Confidence            3457999999999999999999999999999999999999999875433 322222 12222223455689999999999


Q ss_pred             hhhcCCCCCCCHHHHHhCcccccc
Q 040569          239 CLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       239 cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||..||.+|||+.++|+||||+..
T Consensus       262 ~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          262 CLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             HTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             HccCChhhCcCHHHHHhCHHHhcC
Confidence            999999999999999999999764


No 105
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=2.4e-49  Score=370.88  Aligned_cols=247  Identities=26%  Similarity=0.350  Sum_probs=205.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-----CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-----NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+++.||+|.+...     ....+.+|+.++.++ +||||+++++++.....    ++
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~----~~   87 (289)
T 1x8b_A           12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH----ML   87 (289)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE----EE
T ss_pred             hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe----EE
Confidence            589999999999999999999999999999988643     234667899999999 99999999998866543    67


Q ss_pred             EEEeecCCCCHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC---------------
Q 040569           76 LFLEYAPGGTLTDAIRSG----TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN---------------  136 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~----~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~---------------  136 (385)
                      +||||++||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|||++.++               
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            999999999999999743    6799999999999999999999999999999999999997543               


Q ss_pred             --CCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHH
Q 040569          137 --EQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALH  213 (385)
Q Consensus       137 --~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~  213 (385)
                        ...+||+|||++......     ....||+.|+|||++.+. .+++++|||||||++|+|++|.+|+... +....+ 
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-~~~~~~-  240 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG-DQWHEI-  240 (289)
T ss_dssp             --CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-HHHHHH-
T ss_pred             CCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-hHHHHH-
Confidence              224899999999876422     233599999999999876 5567999999999999999999877542 222222 


Q ss_pred             HhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          214 RIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       214 ~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                         .....+.++..+++++.+||.+||+.||.+|||+.|+|+||||...
T Consensus       241 ---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          241 ---RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             ---HTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             ---HcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence               1234566777899999999999999999999999999999999764


No 106
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=2.3e-49  Score=372.64  Aligned_cols=252  Identities=24%  Similarity=0.365  Sum_probs=199.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH-----HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS-----EFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~-----~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|++..+++.||+|.+.....     +.+.++...++.+.||||+++++++.....    +++
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~----~~l   83 (290)
T 3fme_A            8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD----VWI   83 (290)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS----EEE
T ss_pred             hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC----EEE
Confidence            58999999999999999999999999999999865421     234455556888899999999999876544    679


Q ss_pred             EEeecCCCCHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           77 FLEYAPGGTLTDAIR----SGTCLEEGRIRSHTRAVLLGLQYLHSN-GIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~----~~~~l~e~~~~~i~~qil~gL~yLH~~-givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      ||||++| +|.+++.    .+..+++..++.++.||+.||+|||++ ||+||||||+|||++.++.  +||+|||+++..
T Consensus        84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~  160 (290)
T 3fme_A           84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ--VKMCDFGISGYL  160 (290)
T ss_dssp             EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCC--EEBCCC------
T ss_pred             EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC--EEEeecCCcccc
Confidence            9999975 8877765    466799999999999999999999998 9999999999999987665  999999999876


Q ss_pred             cccCCCCCCccccCCcccChhhh----cCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCc
Q 040569          152 RVNEDDEGKPICGTPICMAPEVA----RGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGY  227 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  227 (385)
                      ....  ......||+.|+|||++    .+..++.++|||||||++|+|++|+.||.........+............+..
T Consensus       161 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (290)
T 3fme_A          161 VDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK  238 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTT
T ss_pred             cccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCccccc
Confidence            4322  22334699999999996    45578889999999999999999999998766666555554333333334456


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          228 MSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       228 ~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +++++.+||.+||+.||.+|||+.|+++||||+..
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          239 FSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            89999999999999999999999999999999854


No 107
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=3.6e-49  Score=392.90  Aligned_cols=255  Identities=27%  Similarity=0.375  Sum_probs=207.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeeeeeeeeeecc--CCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQIVAYKGCDISEE--NGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~~~~~lv~E   79 (385)
                      +|+.++.||+|+||+||+|+++.+++.||||.+... .....+|+++|++++||||+++++++....  ....++++|||
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e  133 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD  133 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-chhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence            589999999999999999999999999999988653 334458999999999999999999886532  34556779999


Q ss_pred             ecCCCCHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           80 YAPGGTLTDAIR----SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        80 y~~ggsL~~~l~----~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      |+++ +|.+.+.    ....+++..++.++.||+.||+|||++||+||||||+||||+.++. .+||+|||+++..... 
T Consensus       134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~-~~kl~DFG~a~~~~~~-  210 (420)
T 1j1b_A          134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQLVRG-  210 (420)
T ss_dssp             CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTT-EEEECCCTTCEECCTT-
T ss_pred             cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCC-eEEeccchhhhhcccC-
Confidence            9986 6666654    4567999999999999999999999999999999999999986532 2799999999976432 


Q ss_pred             CCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC-----------------
Q 040569          156 DDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF-----------------  217 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~-----------------  217 (385)
                       ......+||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+..                 
T Consensus       211 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~~~~~~~~  288 (420)
T 1j1b_A          211 -EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNPNY  288 (420)
T ss_dssp             -CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred             -CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhChhh
Confidence             223456799999999999765 7899999999999999999999999875332 22221100                 


Q ss_pred             -CCCCCC---------CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          218 -SSDTPE---------IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       218 -~~~~~~---------~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                       ....+.         ++..+++++++||.+||.+||.+|||+.|+|+||||...
T Consensus       289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence             001111         234578999999999999999999999999999999764


No 108
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.2e-49  Score=375.49  Aligned_cols=252  Identities=25%  Similarity=0.355  Sum_probs=203.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---C---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---N---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|++..+++.+|+|.+...   .   .+.+.+|+.++++++||||+++++++.....    ++
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~----~~   87 (294)
T 4eqm_A           12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC----YY   87 (294)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSE----EE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCe----EE
Confidence            599999999999999999999999999999987432   2   2467899999999999999999998755432    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++|++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus        88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETS  165 (294)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCSSSTTC----
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEEeCCCcccccccc
Confidence            99999999999999997778999999999999999999999999999999999999987766  9999999998664333


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCC--CCCCCCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSD--TPEIPGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~  233 (385)
                      .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||............+.....  ....+..+++.+.
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  245 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS  245 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHH
T ss_pred             ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHH
Confidence            33344567999999999999999999999999999999999999999875433333333321111  1223456899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFV  259 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~  259 (385)
                      ++|.+||.+||.+||+..+.+.+.|.
T Consensus       246 ~li~~~l~~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          246 NVILRATEKDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             HHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred             HHHHHHhcCCHhHccccHHHHHHHHH
Confidence            99999999999999966666665553


No 109
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=4e-49  Score=379.20  Aligned_cols=257  Identities=27%  Similarity=0.403  Sum_probs=209.0

Q ss_pred             ceee-ceeeccCceEEEEEEECCCCcEEEEEeccCC-----CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEE
Q 040569            3 WTRG-QTIGRGSTATVSIGMSNRSSEVFAVKSAELS-----NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         3 y~~~-~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      |.+. +.||+|+||+||+|+++.+++.||+|.+...     ....+.+|+.+++++ .||||+++++++.....    ++
T Consensus        30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~----~~  105 (327)
T 3lm5_A           30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE----II  105 (327)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE----EE
T ss_pred             EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe----EE
Confidence            5555 8999999999999999999999999988642     356788999999999 56999999998765433    66


Q ss_pred             EEEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeec
Q 040569           76 LFLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRAR  152 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~  152 (385)
                      +||||++||+|.+++..  ...+++..++.++.||+.||+|||++||+||||||+|||++... ...+||+|||+++...
T Consensus       106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~  185 (327)
T 3lm5_A          106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG  185 (327)
T ss_dssp             EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-
T ss_pred             EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccC
Confidence            99999999999999864  46799999999999999999999999999999999999998621 2349999999998764


Q ss_pred             ccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc-CCCCCCCCCCcCCHH
Q 040569          153 VNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG-FSSDTPEIPGYMSKQ  231 (385)
Q Consensus       153 ~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~  231 (385)
                      ..  ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.............. ...........+++.
T Consensus       186 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  263 (327)
T 3lm5_A          186 HA--CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL  263 (327)
T ss_dssp             ----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred             Cc--cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHH
Confidence            22  223445799999999999999999999999999999999999999987543322222111 122233344568999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHhCccccccccc
Q 040569          232 AQDFLSKCLIRNPGERWSASELLEHGFVKEQNFK  265 (385)
Q Consensus       232 ~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~~~  265 (385)
                      +++||.+||+.||.+|||++|+|+||||+..++.
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~  297 (327)
T 3lm5_A          264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE  297 (327)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhCCHhhcccccc
Confidence            9999999999999999999999999999876543


No 110
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=5e-49  Score=382.47  Aligned_cols=246  Identities=34%  Similarity=0.526  Sum_probs=209.1

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      |+..+.||+|+||+||+|++..+++.||||.+....      .+.+.+|+++|++++||||+++++++.....    .++
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~l  131 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT----AWL  131 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----EEE
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCe----EEE
Confidence            788999999999999999999999999999986432      2457799999999999999999998876543    679


Q ss_pred             EEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||+. |+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++....  
T Consensus       132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~DfG~a~~~~~--  206 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL--VKLGDFGSASIMAP--  206 (348)
T ss_dssp             EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTE--EEECCCTTCBSSSS--
T ss_pred             EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC--EEEeeccCceecCC--
Confidence            999997 58888885 5667999999999999999999999999999999999999997765  99999999986532  


Q ss_pred             CCCCCccccCCcccChhhhc---CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHH
Q 040569          156 DDEGKPICGTPICMAPEVAR---GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQA  232 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  232 (385)
                         ....+||+.|+|||++.   +..++.++|||||||++|+|++|+.||.... ....+..+.........+..+++.+
T Consensus       207 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l  282 (348)
T 1u5q_A          207 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNESPALQSGHWSEYF  282 (348)
T ss_dssp             ---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCCCCCCCTTSCHHH
T ss_pred             ---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhcCCCCCCCCCCCHHH
Confidence               23457999999999985   5678999999999999999999999997753 3344444333333333455689999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          233 QDFLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       233 ~~ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      ++||.+||+.||.+|||+.++|+|||+..
T Consensus       283 ~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          283 RNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             HHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence            99999999999999999999999999864


No 111
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=8.8e-49  Score=382.24  Aligned_cols=257  Identities=24%  Similarity=0.323  Sum_probs=208.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeecc-CCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEE-NGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+....    .+.+.+|+++|++++||||+++++++.... .....+++
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i  107 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI  107 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence            5999999999999999999999999999999986433    245779999999999999999999876543 12223669


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      ||||+.| +|.++++.+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       108 v~e~~~~-~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~a~~~~~~~~  183 (364)
T 3qyz_A          108 VQDLMET-DLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHD  183 (364)
T ss_dssp             EEECCSE-EHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC--EEECCCTTCEECCGGGC
T ss_pred             EEcccCc-CHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCC--EEEEeCcceEecCCCCC
Confidence            9999975 999999865 4999999999999999999999999999999999999987766  99999999987653322


Q ss_pred             C--CCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc---C-------------
Q 040569          157 D--EGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG---F-------------  217 (385)
Q Consensus       157 ~--~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~---~-------------  217 (385)
                      .  .....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||..............   .             
T Consensus       184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  263 (364)
T 3qyz_A          184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  263 (364)
T ss_dssp             BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence            2  23456899999999987654 589999999999999999999999976533222111110   0             


Q ss_pred             ------C-CCC-----CCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          218 ------S-SDT-----PEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       218 ------~-~~~-----~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                            . ...     ..+...+++++.+||.+||++||.+|||+.|+|+||||++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence                  0 000     01124578999999999999999999999999999999875


No 112
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.7e-49  Score=386.11  Aligned_cols=252  Identities=30%  Similarity=0.463  Sum_probs=210.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++.+.||+|+||+||+|.++.+++.+|+|.+....    .+.+.+|+.+|++++||||+++++++.....    +++|
T Consensus        34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~lv  109 (360)
T 3eqc_A           34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE----ISIC  109 (360)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTE----EEEE
T ss_pred             cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCE----EEEE
Confidence            5899999999999999999999999999999987542    3567899999999999999999998876543    6799


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSN-GIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~-givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      |||++||+|.+++...+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.  +||+|||++......  
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~--  185 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDS--  185 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCC--EEECCCCCCHHHHHH--
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCC--EEEEECCCCcccccc--
Confidence            99999999999999777899999999999999999999996 9999999999999987766  999999999765322  


Q ss_pred             CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHH--------------------------
Q 040569          157 DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPIS--------------------------  210 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--------------------------  210 (385)
                       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........                          
T Consensus       186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence             22345799999999999999999999999999999999999999975432111                          


Q ss_pred             ---------------HHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          211 ---------------ALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       211 ---------------~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                     .+..+.........+..+++++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence                           1111111111122233478999999999999999999999999999999864


No 113
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.4e-48  Score=368.97  Aligned_cols=252  Identities=26%  Similarity=0.425  Sum_probs=211.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------------HHHHHHHHHHHHhcC-CCCeeeeeeeeeecc
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------------SEFLQREQRILSALA-CPQIVAYKGCDISEE   68 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------------~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~   68 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....            .+.+.+|+++|+++. ||||+++++++....
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   97 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence            6899999999999999999999999999999986542            245678999999995 999999999875543


Q ss_pred             CCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCce
Q 040569           69 NGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCA  148 (385)
Q Consensus        69 ~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a  148 (385)
                      .    +++||||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+||+++.++.  +||+|||++
T Consensus        98 ~----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~  171 (298)
T 1phk_A           98 F----FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN--IKLTDFGFS  171 (298)
T ss_dssp             E----EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTC
T ss_pred             e----EEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCc--EEEecccch
Confidence            2    6799999999999999997778999999999999999999999999999999999999987766  999999999


Q ss_pred             eeecccCCCCCCccccCCcccChhhhc------CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCC-
Q 040569          149 RRARVNEDDEGKPICGTPICMAPEVAR------GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDT-  221 (385)
Q Consensus       149 ~~~~~~~~~~~~~~~Gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~-  221 (385)
                      ......  .......||+.|+|||++.      ...++.++|||||||++|+|++|+.||.... .......+...... 
T Consensus       172 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~  248 (298)
T 1phk_A          172 CQLDPG--EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-QMLMLRMIMSGNYQF  248 (298)
T ss_dssp             EECCTT--CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCC
T ss_pred             hhcCCC--cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-HHHHHHHHhcCCccc
Confidence            876432  2234457999999999985      4567889999999999999999999997643 33333332211111 


Q ss_pred             -CCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          222 -PEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       222 -~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                       ......+++.+.+||.+||+.||.+|||+.|+|+||||++.
T Consensus       249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (298)
T 1phk_A          249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  290 (298)
T ss_dssp             CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence             11224589999999999999999999999999999999864


No 114
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=4.5e-49  Score=374.16  Aligned_cols=253  Identities=25%  Similarity=0.407  Sum_probs=211.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||+|.+....   .+.+.+|+.++++++||||+++++++.....    +++||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~   85 (304)
T 2jam_A           10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTH----YYLVM   85 (304)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSE----EEEEE
T ss_pred             cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCE----EEEEE
Confidence            4889999999999999999999999999999987542   3567899999999999999999998765432    67999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeec-CCCCCeEEeecCceeeecccCCC
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSK-DNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~-~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      ||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+.. +....+||+|||++.....   .
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~---~  162 (304)
T 2jam_A           86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---G  162 (304)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC---B
T ss_pred             EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC---C
Confidence            99999999999987778999999999999999999999999999999999999932 2233499999999876432   1


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC--CCCCCCCCcCCHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS--SDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~l  235 (385)
                      .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+...  ......+..+++++++|
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  241 (304)
T 2jam_A          163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-ESKLFEKIKEGYYEFESPFWDDISESAKDF  241 (304)
T ss_dssp             TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHCCCCCCTTTTTTSCHHHHHH
T ss_pred             ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHcCCCCCCccccccCCHHHHHH
Confidence            2334579999999999999999999999999999999999999997643 33333333211  22233445689999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          236 LSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |.+||..||.+|||+.|+|+||||...
T Consensus       242 i~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          242 ICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHHcCCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999999999753


No 115
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.2e-48  Score=373.34  Aligned_cols=244  Identities=31%  Similarity=0.464  Sum_probs=201.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|++  +++.+|||.+....     .+.+.+|+++|++++||||+++++++.....    +++
T Consensus        38 ~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----~~l  111 (309)
T 3p86_A           38 DLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN----LSI  111 (309)
T ss_dssp             GEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC----CEE
T ss_pred             HceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc----eEE
Confidence            588999999999999999987  48899999886543     2467789999999999999999998866544    569


Q ss_pred             EEeecCCCCHHHHHHcCCC---CCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           77 FLEYAPGGTLTDAIRSGTC---LEEGRIRSHTRAVLLGLQYLHSNG--IVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~---l~e~~~~~i~~qil~gL~yLH~~g--ivHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      ||||++||+|.+++...+.   +++..+..++.||+.||+|||++|  |+||||||+|||++.++.  +||+|||+++..
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~--~kL~Dfg~a~~~  189 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT--VKVCDFGLSRLK  189 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCC--EEECCCC-----
T ss_pred             EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCc--EEECCCCCCccc
Confidence            9999999999999986553   999999999999999999999999  999999999999987765  999999999865


Q ss_pred             cccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHH
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQ  231 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  231 (385)
                      ... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||... +.......+........++..++++
T Consensus       190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  267 (309)
T 3p86_A          190 AST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRNLNPQ  267 (309)
T ss_dssp             -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS-CHHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred             ccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCCCccCCHH
Confidence            322 12234567999999999999999999999999999999999999999875 4444445554455666778889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          232 AQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       232 ~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      +.+||.+||..||.+|||+.++++
T Consensus       268 l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          268 VAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999987


No 116
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=4.3e-49  Score=368.44  Aligned_cols=250  Identities=27%  Similarity=0.421  Sum_probs=205.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC------CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL------SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++++.||+|+||+||+|.++.+++.+|||.+..      ...+.+.+|+.++++++||||+++++++.....    ++
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~   87 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD----FF   87 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EE
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe----EE
Confidence            58999999999999999999999999999998853      234578899999999999999999998765432    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||+++++|.+++...+.+++..+..++.||+.||.|||++|++||||||+|||++.++.  +||+|||++...... 
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~-  164 (276)
T 2h6d_A           88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDG-  164 (276)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSC--EEECCCCGGGCCCC--
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCC--EEEeecccccccCCC-
Confidence            99999999999999987778999999999999999999999999999999999999987765  999999999875322 


Q ss_pred             CCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                       .......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||... +.......+..  ....++..+++.+.+
T Consensus       165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~--~~~~~~~~~~~~l~~  240 (276)
T 2h6d_A          165 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRG--GVFYIPEYLNRSVAT  240 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHH
T ss_pred             -cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhhc--CcccCchhcCHHHHH
Confidence             12234579999999999988765 68999999999999999999999764 33333333321  233456678999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          235 FLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ||.+||+.||.+|||+.|+++||||++.
T Consensus       241 li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          241 LLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHccCChhhCCCHHHHHhChhhccC
Confidence            9999999999999999999999999753


No 117
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=8.2e-49  Score=369.70  Aligned_cols=253  Identities=35%  Similarity=0.559  Sum_probs=210.3

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      |.....||+|+||+||+|.+..+++.||+|.+....   .+.+.+|+.++++++||||+++++++.....    +++|||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~lv~e   99 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF----IKIFME   99 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTE----EEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCc----EEEEEE
Confidence            344559999999999999999999999999886543   4678899999999999999999998865442    669999


Q ss_pred             ecCCCCHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeec-CCCCCeEEeecCceeeecccC
Q 040569           80 YAPGGTLTDAIRSG---TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSK-DNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        80 y~~ggsL~~~l~~~---~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~-~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      |+++++|.+++...   ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.  +||+|||++.......
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~--~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A          100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV--LKISDFGTSKRLAGIN  177 (295)
T ss_dssp             CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCC--EEECCTTTCEESCC--
T ss_pred             eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCC--EEEeecccccccCCCC
Confidence            99999999999843   24679999999999999999999999999999999999986 444  9999999998764221


Q ss_pred             CCCCCccccCCcccChhhhcCCC--CCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEE--QGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  233 (385)
                       .......||+.|+|||++.+..  ++.++|||||||++|+|++|+.||...................+.++..+++++.
T Consensus       178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (295)
T 2clq_A          178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK  256 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHH
T ss_pred             -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHH
Confidence             1234457999999999997653  7889999999999999999999997655554444333333445667778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||.+||..||.+|||+.|+|+||||+..
T Consensus       257 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          257 AFILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             HHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             HHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence            99999999999999999999999999864


No 118
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=5.8e-49  Score=372.25  Aligned_cols=253  Identities=30%  Similarity=0.476  Sum_probs=208.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++.+.||+|+||+||+|.++.+++.+|+|.+...   ..+.+.+|+++++++.||||+++++++.....    +++||
T Consensus        20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~   95 (302)
T 2j7t_A           20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK----LWIMI   95 (302)
T ss_dssp             TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-C----EEEEE
T ss_pred             ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCe----EEEEE
Confidence            589999999999999999999999999999988643   35678899999999999999999998876543    67999


Q ss_pred             eecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           79 EYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        79 Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      ||+++++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+|||++.++.  +||+|||++....... .
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~-~  172 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD--IRLADFGVSAKNLKTL-Q  172 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSC--EEECCCHHHHHHHHHH-H
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCC--EEEEECCCCccccccc-c
Confidence            99999999999874 567999999999999999999999999999999999999987766  9999999876432111 1


Q ss_pred             CCCccccCCcccChhhh-----cCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc-CCCCCCCCCCcCCHH
Q 040569          158 EGKPICGTPICMAPEVA-----RGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG-FSSDTPEIPGYMSKQ  231 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~  231 (385)
                      ......||+.|+|||++     .+..++.++|||||||++|+|++|+.||..... ......+. ........+..++.+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  251 (302)
T 2j7t_A          173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSDPPTLLTPSKWSVE  251 (302)
T ss_dssp             C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSCCCCCSSGGGSCHH
T ss_pred             ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-HHHHHHHhccCCcccCCccccCHH
Confidence            12345799999999998     366788999999999999999999999987543 33333322 222222345668999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          232 AQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       232 ~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +.+||.+||..||.+|||+.|+++||||...
T Consensus       252 l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          252 FRDFLKIALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             HHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence            9999999999999999999999999999754


No 119
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.1e-49  Score=379.57  Aligned_cols=252  Identities=25%  Similarity=0.386  Sum_probs=204.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--------SEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++++.||+|+||+||+|+++.+|+.||||.+....        ...+.+|+.++++++||||+++++++.....    
T Consensus        11 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----   86 (346)
T 1ua2_A           11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN----   86 (346)
T ss_dssp             --CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC----
T ss_pred             ccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc----
Confidence            5899999999999999999999999999999986432        1356789999999999999999998865544    


Q ss_pred             EEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           74 YNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      +++||||+++ +|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV--LKLADFGLAKSFG  163 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCCGGGSTTT
T ss_pred             eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCC--EEEEecccceecc
Confidence            6689999986 89988874 456999999999999999999999999999999999999987766  9999999998753


Q ss_pred             ccCCCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC---CCCC-------
Q 040569          153 VNEDDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF---SSDT-------  221 (385)
Q Consensus       153 ~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~---~~~~-------  221 (385)
                      .. .......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.... ....+.++..   ....       
T Consensus       164 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~  241 (346)
T 1ua2_A          164 SP-NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS-DLDQLTRIFETLGTPTEEQWPDMC  241 (346)
T ss_dssp             SC-CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred             CC-cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHcCCCChhhhhhhc
Confidence            22 2233456799999999999764 47889999999999999999999998753 3333222210   0000       


Q ss_pred             -----------CCC-----CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          222 -----------PEI-----PGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       222 -----------~~~-----~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                 +..     ...+++++++||.+||+.||.+|||+.|+|+||||...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence                       001     14467999999999999999999999999999999864


No 120
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.1e-48  Score=390.52  Aligned_cols=251  Identities=25%  Similarity=0.417  Sum_probs=206.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhc------CCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSAL------ACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l------~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++++.||+|+||+||+|.+..+++.||||++....  ...+.+|+++++.+      .|+||+++++++.....    
T Consensus        98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~----  173 (429)
T 3kvw_A           98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH----  173 (429)
T ss_dssp             TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE----
T ss_pred             cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe----
Confidence            5899999999999999999999999999999997653  25667899999887      57799999998776543    


Q ss_pred             EEEEEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           74 YNLFLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      +++||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++...+||+|||+++..
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            679999996 5999999843  3599999999999999999999999999999999999998876656999999999764


Q ss_pred             cccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc----C----------
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG----F----------  217 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~----~----------  217 (385)
                      .    ......+||+.|+|||++.+..++.++|||||||++|+|++|++||....+. ..+..+.    .          
T Consensus       253 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~~~~  327 (429)
T 3kvw_A          253 H----QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIELLGMPSQKLLDASK  327 (429)
T ss_dssp             T----CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHTBT
T ss_pred             C----CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHhhh
Confidence            2    2234568999999999999999999999999999999999999999875332 2221110    0          


Q ss_pred             -------CCCCC------------------------------------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHH
Q 040569          218 -------SSDTP------------------------------------EIPGYMSKQAQDFLSKCLIRNPGERWSASELL  254 (385)
Q Consensus       218 -------~~~~~------------------------------------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL  254 (385)
                             ....+                                    .++...++++.+||.+||+.||.+|||+.|+|
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L  407 (429)
T 3kvw_A          328 RAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQAL  407 (429)
T ss_dssp             THHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHh
Confidence                   00000                                    01223478899999999999999999999999


Q ss_pred             hCcccccc
Q 040569          255 EHGFVKEQ  262 (385)
Q Consensus       255 ~hp~~~~~  262 (385)
                      +||||+..
T Consensus       408 ~Hpw~~~~  415 (429)
T 3kvw_A          408 RHPWLRRR  415 (429)
T ss_dssp             TSTTTC--
T ss_pred             CChhhccC
Confidence            99999864


No 121
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=3.6e-49  Score=378.06  Aligned_cols=255  Identities=29%  Similarity=0.490  Sum_probs=208.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------SEFLQREQRILSALACPQIVAYKGCDISEENG   70 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   70 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....           ...+.+|+++|++++||||+++++++... . 
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~-   88 (322)
T 2ycf_A           11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-D-   88 (322)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-S-
T ss_pred             ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-c-
Confidence            4899999999999999999999999999999886432           23477899999999999999999987543 2 


Q ss_pred             eEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEeecCcee
Q 040569           71 KILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIADFGCAR  149 (385)
Q Consensus        71 ~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~DFG~a~  149 (385)
                         +++||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++. ..+||+|||+++
T Consensus        89 ---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           89 ---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             ---EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             ---eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence               5699999999999999988888999999999999999999999999999999999999976542 248999999998


Q ss_pred             eecccCCCCCCccccCCcccChhhhc---CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh--cCCCCCCCC
Q 040569          150 RARVNEDDEGKPICGTPICMAPEVAR---GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI--GFSSDTPEI  224 (385)
Q Consensus       150 ~~~~~~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~--~~~~~~~~~  224 (385)
                      .....  .......||+.|+|||++.   ...++.++|||||||++|+|++|+.||............+  ......+..
T Consensus       166 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (322)
T 2ycf_A          166 ILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV  243 (322)
T ss_dssp             ECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHH
T ss_pred             ecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchh
Confidence            75321  1122456999999999974   4568899999999999999999999997643322222222  111222233


Q ss_pred             CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          225 PGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       225 ~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      +..+++++.+||.+||..||.+|||+.|+|+||||+...
T Consensus       244 ~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence            345799999999999999999999999999999998653


No 122
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=6.5e-49  Score=375.83  Aligned_cols=253  Identities=23%  Similarity=0.365  Sum_probs=204.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC----CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL----SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++..    ...+.+.+|+++|++++||||+++++++.......  +++|
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--~~lv   87 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH--KVLI   87 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC--EEEE
T ss_pred             CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCce--EEEE
Confidence            48999999999999999999999999999998864    34567789999999999999999999876654333  5689


Q ss_pred             EeecCCCCHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC--CCCCeEEeecCceeeec
Q 040569           78 LEYAPGGTLTDAIRSGT---CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD--NEQGAKIADFGCARRAR  152 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~---~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~--~~~~~kL~DFG~a~~~~  152 (385)
                      |||++||+|.+++....   .+++..+..++.||+.||+|||++||+||||||+|||+..+  +...+||+|||+++...
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            99999999999998432   39999999999999999999999999999999999998321  22238999999998764


Q ss_pred             ccCCCCCCccccCCcccChhhhc--------CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHhcCCC--
Q 040569          153 VNEDDEGKPICGTPICMAPEVAR--------GEEQGFPADVWALGCTVLEMATGRPPWPDVADP---ISALHRIGFSS--  219 (385)
Q Consensus       153 ~~~~~~~~~~~Gt~~y~aPE~~~--------~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~---~~~~~~~~~~~--  219 (385)
                      ..  .......||+.|+|||++.        +..++.++|||||||++|+|++|+.||......   ...+..+....  
T Consensus       168 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~  245 (319)
T 4euu_A          168 DD--EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (319)
T ss_dssp             TT--CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred             CC--CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence            32  2234457999999999986        577899999999999999999999999643322   22222221111  


Q ss_pred             ---------------------CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcc
Q 040569          220 ---------------------DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGF  258 (385)
Q Consensus       220 ---------------------~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~  258 (385)
                                           ....++..+++.+.+||.+||+.||.+|||++|+|+||-
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence                                 011223345678899999999999999999999999975


No 123
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.3e-48  Score=378.63  Aligned_cols=257  Identities=25%  Similarity=0.353  Sum_probs=206.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC----eE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENG----KI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~----~~   72 (385)
                      +|++++.||+|+||+||+|+++.+|+.||+|.+....     ...+.+|+.+|++++||||+++++++......    ..
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   97 (351)
T 3mi9_A           18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG   97 (351)
T ss_dssp             GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred             ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence            5899999999999999999999999999999885432     34677899999999999999999988764321    12


Q ss_pred             EEEEEEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           73 LYNLFLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      .+++||||+++ +|.+.+. ....+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++..
T Consensus        98 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~a~~~  174 (351)
T 3mi9_A           98 SIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAF  174 (351)
T ss_dssp             EEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEEC
T ss_pred             eEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCC--EEEccchhcccc
Confidence            36699999986 7777776 4467999999999999999999999999999999999999987766  999999999876


Q ss_pred             cccC---CCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh---cCCCCCCCC
Q 040569          152 RVNE---DDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI---GFSSDTPEI  224 (385)
Q Consensus       152 ~~~~---~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~---~~~~~~~~~  224 (385)
                      ....   .......+||+.|+|||++.+. .++.++|||||||++|+|++|++||..... ...+..+   .........
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~  253 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE-QHQLALISQLCGSITPEVW  253 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTS
T ss_pred             cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChhhc
Confidence            4222   2223455789999999999764 579999999999999999999999987533 2222221   111111111


Q ss_pred             CCc---------------------------CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          225 PGY---------------------------MSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       225 ~~~---------------------------~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +..                           .++++++||.+||++||.+|||+.|+|+||||...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence            110                           27889999999999999999999999999999753


No 124
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=3.3e-49  Score=376.13  Aligned_cols=248  Identities=23%  Similarity=0.327  Sum_probs=203.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++++.||+|+||+||+|.++.+++.+|+|.+....   .+.+.+|+++|++++||||+++++++.....    +++||
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----~~lv~   86 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKR----LNFIT   86 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE----EEEEE
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCe----eEEEE
Confidence            5899999999999999999999999999999886544   3567799999999999999999999876543    66999


Q ss_pred             eecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           79 EYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        79 Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      ||++||+|.++++. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           87 EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKN--VVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             ECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSC--EEECCCTTCEECC-----
T ss_pred             EecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCC--EEEeecccceeccccccc
Confidence            99999999999985 667999999999999999999999999999999999999987766  999999999876432221


Q ss_pred             C-------------CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCC
Q 040569          158 E-------------GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEI  224 (385)
Q Consensus       158 ~-------------~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  224 (385)
                      .             ....+||+.|+|||++.+..++.++|||||||++|+|++|..||......................
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC  244 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC
Confidence            1             114579999999999999999999999999999999999999987532110000000000000123


Q ss_pred             CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          225 PGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       225 ~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      +..+++.+.+||.+||+.||.+|||+.++++
T Consensus       245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            4557889999999999999999999999987


No 125
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=3.2e-49  Score=380.14  Aligned_cols=254  Identities=28%  Similarity=0.390  Sum_probs=205.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+++.||+|.+....     .+.+.+|+.++++++||||+++++++.....    +++
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~l  101 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR----WYL  101 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----EEE
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE----EEE
Confidence            5899999999999999999999999999999875432     2456789999999999999999998865443    679


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      ||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++...... 
T Consensus       102 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~-  178 (331)
T 4aaa_A          102 VFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGV--VKLCDFGFARTLAAPG-  178 (331)
T ss_dssp             EEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCCTTC--------
T ss_pred             EEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCc--EEEEeCCCceeecCCc-
Confidence            9999999999999887778999999999999999999999999999999999999987765  9999999998654222 


Q ss_pred             CCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc-------------------
Q 040569          157 DEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG-------------------  216 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-------------------  216 (385)
                      .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||....+.........                   
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF  258 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred             cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence            223345799999999999876 689999999999999999999999987543222211110                   


Q ss_pred             CCCCCCCC---------CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          217 FSSDTPEI---------PGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       217 ~~~~~~~~---------~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .....+.+         ...+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            00011111         12478999999999999999999999999999999864


No 126
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=2.1e-48  Score=367.85  Aligned_cols=252  Identities=29%  Similarity=0.426  Sum_probs=206.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|+++.+++.||+|.+....     .+.+.+|+.++++++||||+++++++.....    +++
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~l   79 (299)
T 2r3i_A            4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK----LYL   79 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTE----EEE
T ss_pred             hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCc----eEE
Confidence            6999999999999999999999999999999886432     2567899999999999999999999876543    679


Q ss_pred             EEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           77 FLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ||||+. ++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.  +||+|||++......
T Consensus        80 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~kl~dfg~~~~~~~~  156 (299)
T 2r3i_A           80 VFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP  156 (299)
T ss_dssp             EEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECSTTHHHHHCCC
T ss_pred             EEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCC--EEECcchhhhhccCC
Confidence            999998 5999999843  56899999999999999999999999999999999999987766  999999999765322


Q ss_pred             CCCCCCccccCCcccChhhhcCCC-CCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh----cCC-----------
Q 040569          155 EDDEGKPICGTPICMAPEVARGEE-QGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI----GFS-----------  218 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~----~~~-----------  218 (385)
                      . .......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... ...+..+    +..           
T Consensus       157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  234 (299)
T 2r3i_A          157 V-RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSM  234 (299)
T ss_dssp             S-BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             c-cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHhCCCchhhhhHhhcC
Confidence            1 1233457899999999998765 78999999999999999999999987533 2222221    100           


Q ss_pred             -CCCCCC-----------CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          219 -SDTPEI-----------PGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       219 -~~~~~~-----------~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                       ...+.+           ...+++++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~  290 (299)
T 2r3i_A          235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  290 (299)
T ss_dssp             TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence             000111           12378999999999999999999999999999999864


No 127
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=8e-49  Score=387.17  Aligned_cols=255  Identities=28%  Similarity=0.387  Sum_probs=203.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeeeeeeeeeecc--CCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQIVAYKGCDISEE--NGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|+++.+++ +|+|++... .....+|+++|+.++||||+++++++....  ....++++|||
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~-~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e  118 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQD-KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE  118 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECC-TTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecC-cchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence            58999999999999999999987776 777766432 233457999999999999999999986644  34455779999


Q ss_pred             ecCCCCHHHHH---HcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee-cCCCCCeEEeecCceeeecccC
Q 040569           80 YAPGGTLTDAI---RSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS-KDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        80 y~~ggsL~~~l---~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~-~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      |++++.+....   .....+++..++.++.||+.||+|||++||+||||||+|||++ .++.  +||+|||+++..... 
T Consensus       119 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~--~kL~DFG~a~~~~~~-  195 (394)
T 4e7w_A          119 YVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV--LKLIDFGSAKILIAG-  195 (394)
T ss_dssp             CCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE--EEECCCTTCEECCTT-
T ss_pred             ccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCc--EEEeeCCCcccccCC-
Confidence            99875433332   2466799999999999999999999999999999999999998 4544  899999999876332 


Q ss_pred             CCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC-----------------
Q 040569          156 DDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF-----------------  217 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~-----------------  217 (385)
                       .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||...... ..+..+..                 
T Consensus       196 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~~~~  273 (394)
T 4e7w_A          196 -EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKTMNPNY  273 (394)
T ss_dssp             -CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred             -CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhChhh
Confidence             233456789999999999765 5899999999999999999999999875432 22221100                 


Q ss_pred             -CCCCC---------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          218 -SSDTP---------EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       218 -~~~~~---------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                       ....+         .++..+++++.+||.+||++||.+|||+.|+|+||||+...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence             00111         12334789999999999999999999999999999998753


No 128
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.1e-48  Score=369.13  Aligned_cols=251  Identities=35%  Similarity=0.597  Sum_probs=216.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      .|++++.||+|+||+||+|+++.+++.||+|.+...    ..+.+.+|+.+++++.||||+++++++.....    +++|
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv   98 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK----LWII   98 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE----EEEE
T ss_pred             HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe----EEEE
Confidence            488999999999999999999999999999988643    35778899999999999999999998876543    6799


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |||++|++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++.  +||+|||++........ 
T Consensus        99 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~Dfg~~~~~~~~~~-  174 (303)
T 3a7i_A           99 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQI-  174 (303)
T ss_dssp             EECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC--EEECCCTTCEECBTTBC-
T ss_pred             EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCC--EEEeecccceecCcccc-
Confidence            999999999999975 46999999999999999999999999999999999999987766  99999999987643222 


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+. ....+.++..+++.+.+||.
T Consensus       175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~  252 (303)
T 3a7i_A          175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-PMKVLFLIP-KNNPPTLEGNYSKPLKEFVE  252 (303)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHH-HSCCCCCCSSCCHHHHHHHH
T ss_pred             ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-HHHHHHHhh-cCCCCCCccccCHHHHHHHH
Confidence            2344579999999999999999999999999999999999999997643 333333332 23345567778999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhCcccccc
Q 040569          238 KCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||..||.+|||+.|+++||||...
T Consensus       253 ~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          253 ACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             HHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             HHcCCChhhCcCHHHHhhChhhhcC
Confidence            9999999999999999999998753


No 129
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.5e-48  Score=372.14  Aligned_cols=257  Identities=31%  Similarity=0.515  Sum_probs=207.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccC--CeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSAL-ACPQIVAYKGCDISEEN--GKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~--~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+...  ..+.+.+|+.+++++ .||||+++++++.....  ....+++
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l  104 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL  104 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence            589999999999999999999999999999988643  457788999999999 89999999999876431  1123669


Q ss_pred             EEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           77 FLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ||||+++|+|.+++..  +..+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||++......
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~  182 (326)
T 2x7f_A          105 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDRT  182 (326)
T ss_dssp             EEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC--EEECCCTTTC-----
T ss_pred             EEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCC--EEEeeCcCceecCcC
Confidence            9999999999999984  357999999999999999999999999999999999999987766  999999998865322


Q ss_pred             CCCCCCccccCCcccChhhhc-----CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCC
Q 040569          155 EDDEGKPICGTPICMAPEVAR-----GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMS  229 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s  229 (385)
                      . .......||+.|+|||++.     +..++.++|||||||++|+|++|+.||.... .......+.........+..++
T Consensus       183 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~  260 (326)
T 2x7f_A          183 V-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKWS  260 (326)
T ss_dssp             ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCCCCCSCSCSC
T ss_pred             c-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHhhcCccccCCccccC
Confidence            1 1233457999999999997     5568899999999999999999999997653 3333333322333333456689


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          230 KQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +.+++||.+||..||.+|||+.|+++||||+..
T Consensus       261 ~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          261 KKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            999999999999999999999999999999754


No 130
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=3.5e-48  Score=379.27  Aligned_cols=253  Identities=26%  Similarity=0.357  Sum_probs=197.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC--CeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEEN--GKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+....     .+.+.+|+.+++.++||||+++++++.....  ....+
T Consensus        26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  105 (371)
T 2xrw_A           26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV  105 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred             heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence            5899999999999999999999999999999986431     2457789999999999999999998765431  12236


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||+++ +|.+.+..  .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus       106 ~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~a~~~~~~  180 (371)
T 2xrw_A          106 YIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTS  180 (371)
T ss_dssp             EEEEECCSE-EHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCCCC-------
T ss_pred             EEEEEcCCC-CHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCC--EEEEEeecccccccc
Confidence            799999975 88888874  4899999999999999999999999999999999999987766  999999999875322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCC-------------
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDT-------------  221 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~-------------  221 (385)
                        ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ....+..+......             
T Consensus       181 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~  257 (371)
T 2xrw_A          181 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPEFMKKLQPTV  257 (371)
T ss_dssp             -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred             --cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence              22345679999999999999999999999999999999999999998753 33333222111100             


Q ss_pred             -------CCC--------------C------CcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          222 -------PEI--------------P------GYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       222 -------~~~--------------~------~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                             +..              |      ...++++++||.+||+.||.+|||++|+|+||||+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence                   000              0      0125789999999999999999999999999999754


No 131
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=7.6e-49  Score=383.93  Aligned_cols=252  Identities=25%  Similarity=0.366  Sum_probs=189.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC--CeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEEN--GKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~~~~   74 (385)
                      +|++++.||+|+||+||+|++..+|+.||||++....     ...+.+|+.+|+.++||||+++++++.....  ....+
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  109 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV  109 (367)
T ss_dssp             TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence            5899999999999999999999999999999986431     3466789999999999999999998764321  11125


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++++||+ +++|.++++. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.... 
T Consensus       110 ~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~--~kL~DFG~a~~~~~-  184 (367)
T 2fst_X          110 YLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE--LKILDFGLARHTAD-  184 (367)
T ss_dssp             EEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECC----------
T ss_pred             EEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCC--EEEeeccccccccc-
Confidence            6899999 7899999986 46999999999999999999999999999999999999987766  99999999987532 


Q ss_pred             CCCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC----C-----------
Q 040569          155 EDDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF----S-----------  218 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~----~-----------  218 (385)
                         .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. ....+..+..    .           
T Consensus       185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          185 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-HIDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             ---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence               2344579999999999987 678999999999999999999999998753 2222222100    0           


Q ss_pred             ---------CCCCC-----CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          219 ---------SDTPE-----IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       219 ---------~~~~~-----~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                               ...+.     .....++++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence                     00010     112468999999999999999999999999999999864


No 132
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=9e-49  Score=384.30  Aligned_cols=254  Identities=25%  Similarity=0.272  Sum_probs=204.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcC--------CCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALA--------CPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~--------hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++.+.||+|+||+||+|++..+++.||||++....  .+.+.+|+++|+++.        ||||+++++++.......
T Consensus        38 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~  117 (397)
T 1wak_A           38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG  117 (397)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred             eEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence            5899999999999999999999999999999997543  356789999999995        788999999887554444


Q ss_pred             EEEEEEEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCEEeecCCC-----------
Q 040569           72 ILYNLFLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSN-GIVHCDIKGQNILVSKDNE-----------  137 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~-givHrDlKp~NILi~~~~~-----------  137 (385)
                      ..+++||||+ +++|.+.+..  .+.+++..++.++.||+.||+|||++ ||+||||||+|||++.++.           
T Consensus       118 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~  196 (397)
T 1wak_A          118 THICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATE  196 (397)
T ss_dssp             EEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC-
T ss_pred             ceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHH
Confidence            5578999999 5576666653  25699999999999999999999998 9999999999999986531           


Q ss_pred             ------------------------------------CCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCC
Q 040569          138 ------------------------------------QGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGF  181 (385)
Q Consensus       138 ------------------------------------~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~  181 (385)
                                                          ..+||+|||+++.....    ....+||+.|+|||++.+..++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~  272 (397)
T 1wak_A          197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSGYNT  272 (397)
T ss_dssp             --------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSCCCT
T ss_pred             HhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCCCCCc
Confidence                                                24999999999876422    33457999999999999999999


Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHHh-cCCCC-----------------------------------
Q 040569          182 PADVWALGCTVLEMATGRPPWPDVAD-----PISALHRI-GFSSD-----------------------------------  220 (385)
Q Consensus       182 ~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~-~~~~~-----------------------------------  220 (385)
                      ++|||||||++|+|++|+.||.....     ....+..+ .....                                   
T Consensus       273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (397)
T 1wak_A          273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE  352 (397)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence            99999999999999999999975432     11111111 00000                                   


Q ss_pred             ----CCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccc
Q 040569          221 ----TPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVK  260 (385)
Q Consensus       221 ----~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~  260 (385)
                          ....+...++.+++||.+||++||.+|||+.|+|+||||+
T Consensus       353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                0012233456789999999999999999999999999986


No 133
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=3.7e-48  Score=379.13  Aligned_cols=251  Identities=27%  Similarity=0.360  Sum_probs=202.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC--eEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENG--KILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~--~~~~   74 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||||.+....     ...+.+|+.++++++||||+++++++......  ...+
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  122 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  122 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred             cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence            5889999999999999999999999999999986532     35677999999999999999999988655431  1123


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||+. ++|.+++..  .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.... 
T Consensus       123 ~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kL~Dfg~a~~~~~-  196 (371)
T 4exu_A          123 YLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE--LKILDFGLARHADA-  196 (371)
T ss_dssp             EEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECSTTCC------
T ss_pred             EEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCC--EEEEecCccccccc-
Confidence            69999997 589888753  4999999999999999999999999999999999999987766  99999999986532 


Q ss_pred             CCCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC----C-----------
Q 040569          155 EDDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF----S-----------  218 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~----~-----------  218 (385)
                         .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ...+..+..    .           
T Consensus       197 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~  272 (371)
T 4exu_A          197 ---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEFVQKLNDK  272 (371)
T ss_dssp             ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred             ---CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCcHHHHHHhhhh
Confidence               2334578999999999987 6789999999999999999999999986432 222222100    0           


Q ss_pred             --------------CCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          219 --------------SDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       219 --------------~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                    ......+..+++++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence                          00011123478999999999999999999999999999999864


No 134
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=7.2e-49  Score=378.55  Aligned_cols=252  Identities=25%  Similarity=0.367  Sum_probs=207.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHH-HHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRI-LSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~i-l~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|++..+|+.||||.+....    ...+.+|..+ ++.+.||||+++++++.....    +++
T Consensus        52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~----~~l  127 (340)
T 3an0_A           52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD----VWI  127 (340)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSC----EEE
T ss_pred             heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCc----EEE
Confidence            6889999999999999999999999999999986532    2334455555 777899999999999876544    679


Q ss_pred             EEeecCCCCHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           77 FLEYAPGGTLTDAIR----SGTCLEEGRIRSHTRAVLLGLQYLHSN-GIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~----~~~~l~e~~~~~i~~qil~gL~yLH~~-givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      ||||++| +|.+++.    .+..+++..++.++.||+.||+|||++ ||+||||||+|||++.++.  +||+|||+++..
T Consensus       128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~  204 (340)
T 3an0_A          128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ--VKMCDFGISGYL  204 (340)
T ss_dssp             EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTC--EEECCCSHHHHH
T ss_pred             EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC--EEEeeCCCceec
Confidence            9999986 9988886    466899999999999999999999987 9999999999999987765  999999999765


Q ss_pred             cccCCCCCCccccCCcccChhhhcC----CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCc
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARG----EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGY  227 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  227 (385)
                      ....  ......||+.|+|||++.+    ..++.++|||||||++|+|++|+.||.........+..+.........+..
T Consensus       205 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (340)
T 3an0_A          205 VDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK  282 (340)
T ss_dssp             SCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGG
T ss_pred             cccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCccc
Confidence            3211  1122469999999999754    367889999999999999999999998765655555544333322333345


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          228 MSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       228 ~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +++++.+||.+||..||.+|||+.|+++||||...
T Consensus       283 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~  317 (340)
T 3an0_A          283 FSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  317 (340)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccc
Confidence            89999999999999999999999999999999754


No 135
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=6.5e-48  Score=365.55  Aligned_cols=254  Identities=26%  Similarity=0.423  Sum_probs=210.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|.++.+++.+|+|.+...       ..+.+.+|++++++++||||+++++++.......  +
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--~   83 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK--M   83 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C--E
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe--E
Confidence            699999999999999999999999999999988642       2457889999999999999999999876443322  5


Q ss_pred             EEEEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           75 NLFLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      ++||||++++ |.+++..  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++....
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~--~kl~dfg~~~~~~  160 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT--LKISALGVAEALH  160 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCTTCEECC
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCc--EEeeccccccccC
Confidence            6999999886 7777763  557999999999999999999999999999999999999987766  9999999998764


Q ss_pred             ccCC-CCCCccccCCcccChhhhcCCC--CCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCC
Q 040569          153 VNED-DEGKPICGTPICMAPEVARGEE--QGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMS  229 (385)
Q Consensus       153 ~~~~-~~~~~~~Gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s  229 (385)
                      .... .......||+.|+|||++.+..  ++.++|||||||++|+|++|+.||... +.......+..  ....++..++
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~--~~~~~~~~~~  237 (305)
T 2wtk_C          161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGK--GSYAIPGDCG  237 (305)
T ss_dssp             TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHH--CCCCCCSSSC
T ss_pred             ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHhc--CCCCCCCccC
Confidence            2211 1223456999999999998654  377999999999999999999999764 34444443322  2334566789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          230 KQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      +.+.+||.+||..||.+|||+.|+++||||+...
T Consensus       238 ~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence            9999999999999999999999999999998653


No 136
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=7.3e-49  Score=371.13  Aligned_cols=255  Identities=32%  Similarity=0.520  Sum_probs=191.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|.+..+++.||||.+....    .+.+.+|+.++++++||||+++++++.....    +++|
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv   91 (303)
T 2vwi_A           16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE----LWLV   91 (303)
T ss_dssp             CCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSC----EEEE
T ss_pred             hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC----cEEE
Confidence            6999999999999999999999999999999886432    3567789999999999999999998876654    6799


Q ss_pred             EeecCCCCHHHHHHc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           78 LEYAPGGTLTDAIRS--------GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~--------~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                      |||++|++|.+++..        .+.+++..+..++.||+.||.|||++||+||||||+||+++.++.  +||+|||++.
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~kl~dfg~~~  169 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS--VQIADFGVSA  169 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC--EEECCCHHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCC--EEEEeccchh
Confidence            999999999999973        456999999999999999999999999999999999999987766  9999999987


Q ss_pred             eecccCC----CCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC-----
Q 040569          150 RARVNED----DEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS-----  219 (385)
Q Consensus       150 ~~~~~~~----~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~-----  219 (385)
                      .......    .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.................     
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET  249 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence            6532211    12234579999999999976 5689999999999999999999999987544333322221111     


Q ss_pred             --CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          220 --DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       220 --~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                        ..+.....+++++++||.+||+.||.+|||+.|+++||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred             ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence              1123345688999999999999999999999999999999864


No 137
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.5e-48  Score=362.44  Aligned_cols=246  Identities=22%  Similarity=0.332  Sum_probs=209.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.+. +++.||+|.+...  ..+.+.+|++++++++||||+++++++.....    +++|||
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e   85 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP----ICLVFE   85 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS----EEEEEE
T ss_pred             hceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc----eEEEEE
Confidence            5889999999999999999987 5778999998754  35778999999999999999999998766544    679999


Q ss_pred             ecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           80 YAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        80 y~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      |+++++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+||+++.++.  +||+|||+++.........
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~  163 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQYTS  163 (269)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC--EEECCTTGGGGBCCHHHHS
T ss_pred             eCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCC--EEecccccccccccccccc
Confidence            9999999999974 556899999999999999999999999999999999999987765  9999999998654332223


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      .....||+.|+|||++.+..++.++|||||||++|+|++ |+.||... ........+. ....+..+...++.+.+|+.
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~  241 (269)
T 4hcu_A          164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDIS-TGFRLYKPRLASTHVYQIMN  241 (269)
T ss_dssp             TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHH-TTCCCCCCTTSCHHHHHHHH
T ss_pred             ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHh-cCccCCCCCcCCHHHHHHHH
Confidence            344567889999999999999999999999999999999 99999874 3344444432 23344556678999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhC
Q 040569          238 KCLIRNPGERWSASELLEH  256 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~h  256 (385)
                      +||+.||.+|||+.|+++|
T Consensus       242 ~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          242 HCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCCcccCcCHHHHHHH
Confidence            9999999999999999986


No 138
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=5.5e-48  Score=359.66  Aligned_cols=246  Identities=23%  Similarity=0.318  Sum_probs=208.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.++ ++..+|+|.+...  ..+.+.+|++++++++||||+++++++.....    +++|||
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e   83 (268)
T 3sxs_A            9 EITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP----IYIVTE   83 (268)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----EEEEEE
T ss_pred             heeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCc----eEEEEE
Confidence            5899999999999999999886 5678999998754  35678899999999999999999998765443    669999


Q ss_pred             ecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           80 YAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        80 y~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      |+++++|.+++.. +..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++..........
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~~~  161 (268)
T 3sxs_A           84 YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLC--VKVSDFGMTRYVLDDQYVS  161 (268)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCC--EEECCTTCEEECCTTCEEE
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCC--EEEccCccceecchhhhhc
Confidence            9999999999985 445999999999999999999999999999999999999987766  9999999998764333223


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      .....||+.|+|||++.+..++.++|||||||++|+|++ |+.||...... .....+. .......+...++.+.+||.
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~li~  239 (268)
T 3sxs_A          162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-EVVLKVS-QGHRLYRPHLASDTIYQIMY  239 (268)
T ss_dssp             CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHH-TTCCCCCCTTSCHHHHHHHH
T ss_pred             ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-HHHHHHH-cCCCCCCCCcChHHHHHHHH
Confidence            334457788999999999999999999999999999999 99999765433 3333332 23344456668999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhC
Q 040569          238 KCLIRNPGERWSASELLEH  256 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~h  256 (385)
                      +||+.||.+|||+.|++++
T Consensus       240 ~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          240 SCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HTTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9999999999999999986


No 139
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2.6e-48  Score=377.08  Aligned_cols=256  Identities=25%  Similarity=0.343  Sum_probs=195.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcCCCCeeeeeeeeeecc---CCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALACPQIVAYKGCDISEE---NGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~hpnIv~~~~~~~~~~---~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....  .....+|++.++.++||||+++++++....   ....++++
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l  103 (360)
T 3e3p_A           24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV  103 (360)
T ss_dssp             TEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence            5899999999999999999999999999999875432  345567888889999999999999986533   23445779


Q ss_pred             EEeecCCCCHHHHH----HcCCCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCCEEeec-CCCCCeEEeecCcee
Q 040569           77 FLEYAPGGTLTDAI----RSGTCLEEGRIRSHTRAVLLGLQYLH--SNGIVHCDIKGQNILVSK-DNEQGAKIADFGCAR  149 (385)
Q Consensus        77 v~Ey~~ggsL~~~l----~~~~~l~e~~~~~i~~qil~gL~yLH--~~givHrDlKp~NILi~~-~~~~~~kL~DFG~a~  149 (385)
                      ||||+++ +|.+.+    .....+++..+..++.||+.||.|||  ++||+||||||+|||++. ++.  +||+|||+++
T Consensus       104 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~--~kl~Dfg~a~  180 (360)
T 3e3p_A          104 VMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT--LKLCDFGSAK  180 (360)
T ss_dssp             EEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTE--EEECCCTTCB
T ss_pred             Eeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCc--EEEeeCCCce
Confidence            9999987 554443    35667999999999999999999999  999999999999999986 444  9999999998


Q ss_pred             eecccCCCCCCccccCCcccChhhhcCCC-CCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC----------
Q 040569          150 RARVNEDDEGKPICGTPICMAPEVARGEE-QGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS----------  218 (385)
Q Consensus       150 ~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~----------  218 (385)
                      .....  .......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..... ...+..+...          
T Consensus       181 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~  257 (360)
T 3e3p_A          181 KLSPS--EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCPSREVLR  257 (360)
T ss_dssp             CCCTT--SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHH
T ss_pred             ecCCC--CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCCCHHHHH
Confidence            76432  2334557899999999997654 89999999999999999999999987533 2222221100          


Q ss_pred             --------------------CCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          219 --------------------SDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       219 --------------------~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                                          ...+..+...++++++||.+||+.||.+|||+.|+|+||||+...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence                                001122233678999999999999999999999999999998754


No 140
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.2e-48  Score=366.09  Aligned_cols=254  Identities=25%  Similarity=0.397  Sum_probs=211.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|+++.+++.+|+|.+....     .+.+.+|+.++++++||||+++++++.......  +++
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--~~l   84 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT--LYI   84 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE--EEE
T ss_pred             heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCce--EEE
Confidence            5899999999999999999999999999999986432     356789999999999999999999876544333  569


Q ss_pred             EEeecCCCCHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCCCCEEeecCCCCCeEEeecCc
Q 040569           77 FLEYAPGGTLTDAIRS----GTCLEEGRIRSHTRAVLLGLQYLHSNG-----IVHCDIKGQNILVSKDNEQGAKIADFGC  147 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~----~~~l~e~~~~~i~~qil~gL~yLH~~g-----ivHrDlKp~NILi~~~~~~~~kL~DFG~  147 (385)
                      ||||++|++|.+++..    ...+++..+..++.||+.||.|||++|     |+||||||+|||++.++.  +||+|||+
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~--~kl~dfg~  162 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN--VKLGDFGL  162 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSC--EEECCCCH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCC--EEEecCch
Confidence            9999999999999973    345999999999999999999999999     999999999999987765  99999999


Q ss_pred             eeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCc
Q 040569          148 ARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGY  227 (385)
Q Consensus       148 a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  227 (385)
                      ++...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+. ....+.++..
T Consensus       163 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~i~-~~~~~~~~~~  239 (279)
T 2w5a_A          163 ARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-QKELAGKIR-EGKFRRIPYR  239 (279)
T ss_dssp             HHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHH-HTCCCCCCTT
T ss_pred             heeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-HHHHHHHHh-hcccccCCcc
Confidence            97653211 11123468999999999999999999999999999999999999998753 333333332 2334456777


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          228 MSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       228 ~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +++++.+||.+||+.||.+|||+.|+|+|+|+...
T Consensus       240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            89999999999999999999999999999998754


No 141
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=5.6e-48  Score=363.67  Aligned_cols=253  Identities=26%  Similarity=0.393  Sum_probs=211.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC-----CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL-----SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~-----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|+++.+++.||+|.+..     ...+.+.+|++++++++||||+++++++.....    +++
T Consensus        23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~l   98 (287)
T 2wei_A           23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS----FYI   98 (287)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE----EEE
T ss_pred             cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe----EEE
Confidence            48999999999999999999999999999998753     245778899999999999999999998765432    669


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+||+++.++ ...+||+|||++...... 
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~-  177 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-  177 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC-
T ss_pred             EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC-
Confidence            999999999999998767899999999999999999999999999999999999997644 234899999999865322 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCC--CCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEI--PGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~  233 (385)
                       .......||+.|+|||++.+. ++.++|||||||++|+|++|+.||... +.......+.........  ...+++++.
T Consensus       178 -~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (287)
T 2wei_A          178 -TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAK  254 (287)
T ss_dssp             -SSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGGGTTSCHHHH
T ss_pred             -CccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCchhhhhcCHHHH
Confidence             223445689999999998764 889999999999999999999999874 333333333222211112  245799999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +||.+||..||.+|||+.|+|+||||++.
T Consensus       255 ~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          255 DLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999999999999999754


No 142
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=5.1e-48  Score=370.37  Aligned_cols=252  Identities=23%  Similarity=0.302  Sum_probs=204.3

Q ss_pred             CceeeceeeccCceEEEEEEE-CCCCcEEEEEeccCCC--HHHHHHHHHHHHhcCCC------CeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMS-NRSSEVFAVKSAELSN--SEFLQREQRILSALACP------QIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~-~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~hp------nIv~~~~~~~~~~~~~~   72 (385)
                      +|++.+.||+|+||+||+|.+ +.+++.||||++....  .+.+.+|+++++.++|+      +|+++++++.....   
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~---   91 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH---   91 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE---
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc---
Confidence            699999999999999999998 5689999999987543  35678999999998665      48999988765543   


Q ss_pred             EEEEEEeecCCCCHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC--------------
Q 040569           73 LYNLFLEYAPGGTLTDAIRSGT--CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN--------------  136 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~~--~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~--------------  136 (385)
                       +++||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.++              
T Consensus        92 -~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~  169 (339)
T 1z57_A           92 -ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER  169 (339)
T ss_dssp             -EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred             -EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence             67999999 889999998544  689999999999999999999999999999999999997643              


Q ss_pred             ---CCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHH--
Q 040569          137 ---EQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISA--  211 (385)
Q Consensus       137 ---~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--  211 (385)
                         ...+||+|||+++....    ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.........  
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  245 (339)
T 1z57_A          170 TLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM  245 (339)
T ss_dssp             EESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred             cccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence               33489999999987432    234557999999999999999999999999999999999999999865332211  


Q ss_pred             HHHhcCCC---------------------------------------CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHH
Q 040569          212 LHRIGFSS---------------------------------------DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASE  252 (385)
Q Consensus       212 ~~~~~~~~---------------------------------------~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~e  252 (385)
                      +..+....                                       .....+...++++.+||.+||+.||.+|||+.|
T Consensus       246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence            11110000                                       000111223578999999999999999999999


Q ss_pred             HHhCcccccc
Q 040569          253 LLEHGFVKEQ  262 (385)
Q Consensus       253 lL~hp~~~~~  262 (385)
                      +|+||||+..
T Consensus       326 ll~hp~f~~~  335 (339)
T 1z57_A          326 ALKHPFFDLL  335 (339)
T ss_dssp             HTTSGGGGGG
T ss_pred             HhcCHHHHHH
Confidence            9999999864


No 143
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.1e-47  Score=376.02  Aligned_cols=247  Identities=23%  Similarity=0.341  Sum_probs=206.8

Q ss_pred             CceeeceeeccCceEEEEEEEC-------CCCcEEEEEeccCCC----HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-------RSSEVFAVKSAELSN----SEFLQREQRILSAL-ACPQIVAYKGCDISEEN   69 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-------~~~~~~AvK~~~~~~----~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~   69 (385)
                      +|++++.||+|+||+||+|.+.       .++..||||.+....    .+.+.+|+.+|+++ +||||+++++++.....
T Consensus        82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~  161 (370)
T 2psq_A           82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP  161 (370)
T ss_dssp             GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred             HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence            5889999999999999999874       346689999987543    24678999999999 89999999998766544


Q ss_pred             CeEEEEEEEeecCCCCHHHHHHcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee
Q 040569           70 GKILYNLFLEYAPGGTLTDAIRSGT----------------CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS  133 (385)
Q Consensus        70 ~~~~~~lv~Ey~~ggsL~~~l~~~~----------------~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~  133 (385)
                          +++||||++||+|.+++....                .+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus       162 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~  237 (370)
T 2psq_A          162 ----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT  237 (370)
T ss_dssp             ----CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             ----EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEEC
Confidence                668999999999999998532                478999999999999999999999999999999999998


Q ss_pred             cCCCCCeEEeecCceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHH
Q 040569          134 KDNEQGAKIADFGCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISA  211 (385)
Q Consensus       134 ~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~  211 (385)
                      .++.  +||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.... ....
T Consensus       238 ~~~~--~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~-~~~~  314 (370)
T 2psq_A          238 ENNV--MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEEL  314 (370)
T ss_dssp             TTCC--EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGH
T ss_pred             CCCC--EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHH
Confidence            7766  99999999987643222 12234467889999999999999999999999999999999 999998753 3333


Q ss_pred             HHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          212 LHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       212 ~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ...+ .....+..+..+++++.+||.+||..||.+|||+.|++++
T Consensus       315 ~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          315 FKLL-KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHH-HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHH-hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3333 2334456677899999999999999999999999999874


No 144
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=8.8e-50  Score=391.28  Aligned_cols=246  Identities=14%  Similarity=0.119  Sum_probs=194.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHH---HHHhcCCCCeeeee-------eeee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQR---ILSALACPQIVAYK-------GCDI   65 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~---il~~l~hpnIv~~~-------~~~~   65 (385)
                      +|++++.||+|+||+||+|+++.+|+.||||++...      ..+.+.+|+.   +|+++.||||++++       +++.
T Consensus        74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~  153 (377)
T 3byv_A           74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  153 (377)
T ss_dssp             EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred             eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence            478899999999999999999999999999998632      2367889994   55555899999998       4333


Q ss_pred             eccC----------Ce---EEEEEEEeecCCCCHHHHHHcCCCCCH-------HHHHHHHHHHHHHHHHHHHCCceeccC
Q 040569           66 SEEN----------GK---ILYNLFLEYAPGGTLTDAIRSGTCLEE-------GRIRSHTRAVLLGLQYLHSNGIVHCDI  125 (385)
Q Consensus        66 ~~~~----------~~---~~~~lv~Ey~~ggsL~~~l~~~~~l~e-------~~~~~i~~qil~gL~yLH~~givHrDl  125 (385)
                      ....          +.   ...+++|||+ +|+|.+++...+.+++       ..+..++.||+.||+|||++||+||||
T Consensus       154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDi  232 (377)
T 3byv_A          154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  232 (377)
T ss_dssp             CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            2211          11   1256999999 6799999986555665       788889999999999999999999999


Q ss_pred             CCCCEEeecCCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCC-----------CCCCCCChHHHHHHHHH
Q 040569          126 KGQNILVSKDNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGE-----------EQGFPADVWALGCTVLE  194 (385)
Q Consensus       126 Kp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-----------~~~~~~DiwSlG~il~e  194 (385)
                      ||+|||++.++.  +||+|||+++....    .....+| +.|+|||++.+.           .++.++|||||||++|+
T Consensus       233 kp~NIll~~~~~--~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e  305 (377)
T 3byv_A          233 RPVDIVLDQRGG--VFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW  305 (377)
T ss_dssp             CGGGEEECTTCC--EEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred             CHHHEEEcCCCC--EEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence            999999997765  99999999986421    2234568 999999999887           89999999999999999


Q ss_pred             HHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          195 MATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       195 lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      |++|+.||...... .....+      ...+..+++++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       306 lltg~~Pf~~~~~~-~~~~~~------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          306 IWCADLPITKDAAL-GGSEWI------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             HHHSSCCC-------CCSGGG------GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             HHHCCCCCcccccc-cchhhh------hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            99999999754221 111111      11124579999999999999999999999999999999865


No 145
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.2e-47  Score=372.23  Aligned_cols=251  Identities=27%  Similarity=0.358  Sum_probs=203.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC--eEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENG--KILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~--~~~~   74 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||||.+....     ...+.+|+.+|++++||||+++++++......  ...+
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  104 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  104 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence            5899999999999999999999999999999986432     24667899999999999999999987654321  1124


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||+. ++|.+++..  .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.... 
T Consensus       105 ~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~-  178 (353)
T 3coi_A          105 YLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE--LKILDFGLARHADA-  178 (353)
T ss_dssp             EEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCC--EEECSTTCTTC----
T ss_pred             EEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCc--EEEeecccccCCCC-
Confidence            69999997 588888754  4999999999999999999999999999999999999987766  99999999986532 


Q ss_pred             CCCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc-----------------
Q 040569          155 EDDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG-----------------  216 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-----------------  216 (385)
                         ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.... ....+..+.                 
T Consensus       179 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~  254 (353)
T 3coi_A          179 ---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-YLDQLTQILKVTGVPGTEFVQKLNDK  254 (353)
T ss_dssp             --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC-HHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred             ---CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence               2234578999999999987 678999999999999999999999997643 222222110                 


Q ss_pred             ------------CCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          217 ------------FSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       217 ------------~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                  ...........+++++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                        0111223345679999999999999999999999999999999864


No 146
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.4e-48  Score=377.09  Aligned_cols=249  Identities=25%  Similarity=0.345  Sum_probs=208.1

Q ss_pred             CceeeceeeccCceEEEEEE-----ECCCCcEEEEEeccCCC----HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGM-----SNRSSEVFAVKSAELSN----SEFLQREQRILSAL-ACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~-----~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++++.||+|+||+||+|+     +..+++.||||.+....    .+.+.+|+++|+++ +||||+++++++...... 
T Consensus        23 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~-  101 (359)
T 3vhe_A           23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP-  101 (359)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC-
T ss_pred             ceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc-
Confidence            58899999999999999999     56677999999987543    24578999999999 889999999987654331 


Q ss_pred             EEEEEEEeecCCCCHHHHHHcCCC--------------------------------------------------------
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSGTC--------------------------------------------------------   95 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~~~--------------------------------------------------------   95 (385)
                        +++||||++||+|.+++.....                                                        
T Consensus       102 --~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          102 --LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             --CEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             --eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence              5589999999999999985432                                                        


Q ss_pred             ----------CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC-CCCCcccc
Q 040569           96 ----------LEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED-DEGKPICG  164 (385)
Q Consensus        96 ----------l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~G  164 (385)
                                +++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....... .......|
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~~  257 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV--VKICDFGLARDIYKDPDYVRKGDARL  257 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCc--EEEEeccceeeecccccchhccccCC
Confidence                      899999999999999999999999999999999999987766  99999999986532222 12334578


Q ss_pred             CCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcC
Q 040569          165 TPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRN  243 (385)
Q Consensus       165 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~d  243 (385)
                      |+.|+|||++.+..++.++|||||||++|+|++ |+.||............+ .....+..+..+++++.++|.+||++|
T Consensus       258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~d  336 (359)
T 3vhe_A          258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAPDYTTPEMYQTMLDCWHGE  336 (359)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH-HHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999999999999999999998 999998765444333333 223345567779999999999999999


Q ss_pred             CCCCCCHHHHHhC
Q 040569          244 PGERWSASELLEH  256 (385)
Q Consensus       244 P~~Rps~~elL~h  256 (385)
                      |.+|||+.|+++|
T Consensus       337 P~~Rps~~ell~~  349 (359)
T 3vhe_A          337 PSQRPTFSELVEH  349 (359)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCCCHHHHHHH
Confidence            9999999999986


No 147
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=9.2e-48  Score=372.18  Aligned_cols=258  Identities=23%  Similarity=0.347  Sum_probs=205.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeecc-CCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEE-NGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+|+.||||.+....    ...+.+|+.+|++++||||+++++++.... .....+++
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l   91 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI   91 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence            6899999999999999999999999999999986543    245678999999999999999999865431 11123669


Q ss_pred             EEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           77 FLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      ||||+. |+|.+++..+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus        92 v~e~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~a~~~~~~~~  167 (353)
T 2b9h_A           92 IQELMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD--LKVCDFGLARIIDESAA  167 (353)
T ss_dssp             EECCCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECC----
T ss_pred             EEeccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCc--EEEEecccccccccccc
Confidence            999997 5999999864 5999999999999999999999999999999999999987766  99999999987643221


Q ss_pred             C---------CCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh---cCCC----
Q 040569          157 D---------EGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI---GFSS----  219 (385)
Q Consensus       157 ~---------~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~---~~~~----  219 (385)
                      .         .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............   +...    
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T 2b9h_A          168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND  247 (353)
T ss_dssp             ------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT
T ss_pred             cccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc
Confidence            1         1234578999999999865 678999999999999999999999998753222111110   0000    


Q ss_pred             --------------CCC--------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          220 --------------DTP--------EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       220 --------------~~~--------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                                    ..+        .....+++++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence                          000        11235789999999999999999999999999999998653


No 148
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=9.5e-49  Score=382.99  Aligned_cols=256  Identities=14%  Similarity=0.099  Sum_probs=189.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------HHHHHHHHHHHHhc--CCCCeeeeee-------eeee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------SEFLQREQRILSAL--ACPQIVAYKG-------CDIS   66 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------~~~~~~E~~il~~l--~hpnIv~~~~-------~~~~   66 (385)
                      +|++++.||+|+||+||+|+++.+++.||||++....      .+.+++|+.+++.|  .||||++++.       ++..
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred             eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence            4889999999999999999999999999999987643      34567786555555  6999888553       2222


Q ss_pred             ccC-------------CeEEEEEEEeecCCCCHHHHHHc-CCCCCHHHH------HHHHHHHHHHHHHHHHCCceeccCC
Q 040569           67 EEN-------------GKILYNLFLEYAPGGTLTDAIRS-GTCLEEGRI------RSHTRAVLLGLQYLHSNGIVHCDIK  126 (385)
Q Consensus        67 ~~~-------------~~~~~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~------~~i~~qil~gL~yLH~~givHrDlK  126 (385)
                      ...             ....+++||||++ |+|.+++.. +..+++...      ..++.||+.||+|||++||+|||||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDik  221 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFT  221 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCC
Confidence            111             0133679999998 799999984 334555555      5777999999999999999999999


Q ss_pred             CCCEEeecCCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcC--CCCCCCCChHHHHHHHHHHHhCCCCCCC
Q 040569          127 GQNILVSKDNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARG--EEQGFPADVWALGCTVLEMATGRPPWPD  204 (385)
Q Consensus       127 p~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~Pf~~  204 (385)
                      |+|||++.++.  +||+|||+++.....    .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||..
T Consensus       222 p~NIll~~~~~--~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  295 (371)
T 3q60_A          222 PDNLFIMPDGR--LMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL  295 (371)
T ss_dssp             GGGEEECTTSC--EEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred             HHHEEECCCCC--EEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence            99999987766  999999999875321    113467799999999987  6789999999999999999999999976


Q ss_pred             CCChHHHHH-H---hcCCCCCC--CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccccc
Q 040569          205 VADPISALH-R---IGFSSDTP--EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQNF  264 (385)
Q Consensus       205 ~~~~~~~~~-~---~~~~~~~~--~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~~  264 (385)
                      ......... .   ........  ..+..+++++++||.+||++||.+|||+.|+|+||||+....
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  361 (371)
T 3q60_A          296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQN  361 (371)
T ss_dssp             CCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred             cCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence            522111000 0   00011111  122468999999999999999999999999999999987543


No 149
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=2e-48  Score=376.08  Aligned_cols=249  Identities=23%  Similarity=0.361  Sum_probs=211.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH--------------------HHHHHHHHHHHhcCCCCeeeee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS--------------------EFLQREQRILSALACPQIVAYK   61 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~--------------------~~~~~E~~il~~l~hpnIv~~~   61 (385)
                      +|++++.||+|+||+||+|.+  +++.||+|.+.....                    +.+.+|+.++++++||||++++
T Consensus        32 ~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           32 DYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             TEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             ceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            699999999999999999998  899999998753211                    7888999999999999999999


Q ss_pred             eeeeeccCCeEEEEEEEeecCCCCHHHH------HHc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCEEe
Q 040569           62 GCDISEENGKILYNLFLEYAPGGTLTDA------IRS--GTCLEEGRIRSHTRAVLLGLQYLHS-NGIVHCDIKGQNILV  132 (385)
Q Consensus        62 ~~~~~~~~~~~~~~lv~Ey~~ggsL~~~------l~~--~~~l~e~~~~~i~~qil~gL~yLH~-~givHrDlKp~NILi  132 (385)
                      +++.....    +++||||++||+|.++      +..  ...+++..+..++.||+.||.|||+ +||+||||||+|||+
T Consensus       110 ~~~~~~~~----~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~  185 (348)
T 2pml_X          110 GIITNYDE----VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM  185 (348)
T ss_dssp             EEEESSSE----EEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred             EEEeeCCe----EEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence            98766532    6799999999999998      665  6779999999999999999999999 999999999999999


Q ss_pred             ecCCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCC-CCCC-CCChHHHHHHHHHHHhCCCCCCCCCChHH
Q 040569          133 SKDNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGE-EQGF-PADVWALGCTVLEMATGRPPWPDVADPIS  210 (385)
Q Consensus       133 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~-~~~~-~~DiwSlG~il~elltG~~Pf~~~~~~~~  210 (385)
                      +.++.  +||+|||++......   ......||+.|+|||++.+. .++. ++|||||||++|+|++|+.||........
T Consensus       186 ~~~~~--~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  260 (348)
T 2pml_X          186 DKNGR--VKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE  260 (348)
T ss_dssp             CTTSC--EEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred             cCCCc--EEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            87765  999999999876322   23445799999999999887 5665 99999999999999999999987655445


Q ss_pred             HHHHhcCCCCCCCCC-------------------CcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          211 ALHRIGFSSDTPEIP-------------------GYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       211 ~~~~~~~~~~~~~~~-------------------~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      ....+...  ...++                   ..+++++.+||.+||+.||.+|||+.|+|+||||....
T Consensus       261 ~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          261 LFNNIRTK--NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             HHHHHTSC--CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHhcc--CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            54444222  12222                   56899999999999999999999999999999998653


No 150
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=9.9e-48  Score=362.67  Aligned_cols=256  Identities=24%  Similarity=0.371  Sum_probs=203.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcCCCCeeeeeeeeeecc---------CC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALACPQIVAYKGCDISEE---------NG   70 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~hpnIv~~~~~~~~~~---------~~   70 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+....  .+.+.+|+.++++++||||+++++++....         ..
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   86 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKK   86 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------C
T ss_pred             cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccccc
Confidence            5899999999999999999999999999999986532  356789999999999999999999876532         12


Q ss_pred             eEEEEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           71 KILYNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        71 ~~~~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                      ...+++||||++||+|.+++.. +..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++.
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~  164 (303)
T 1zy4_A           87 KSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRN--VKIGDFGLAK  164 (303)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECCCCCCS
T ss_pred             CCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCC--EEEeeCcchh
Confidence            3457799999999999999984 446889999999999999999999999999999999999987766  9999999997


Q ss_pred             eecccC-------------CCCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh
Q 040569          150 RARVNE-------------DDEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI  215 (385)
Q Consensus       150 ~~~~~~-------------~~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~  215 (385)
                      ......             ........||+.|+|||++.+. .++.++|||||||++|+|++   ||....+.......+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~  241 (303)
T 1zy4_A          165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL  241 (303)
T ss_dssp             CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred             hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhc
Confidence            653211             1122345799999999999865 68999999999999999998   554322222233332


Q ss_pred             cC--CCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          216 GF--SSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       216 ~~--~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ..  ....+.++...++.+++||.+||++||.+|||+.++++||||...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             cccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            11  122344566678899999999999999999999999999999754


No 151
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=5.5e-48  Score=372.97  Aligned_cols=257  Identities=25%  Similarity=0.348  Sum_probs=187.8

Q ss_pred             Cceee-ceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRG-QTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~-~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|.+. +.||+|+||+||+|+++.+++.||||++... ....++....++.+.||||+++++++.....+...+++||||
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~  107 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC  107 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEec
Confidence            57785 4699999999999999999999999998653 333334444567779999999999987766656667899999


Q ss_pred             cCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeecccCCC
Q 040569           81 APGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        81 ~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      ++||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++ ...+||+|||+++.....   
T Consensus       108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~---  184 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---  184 (336)
T ss_dssp             CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc---
Confidence            9999999999854  3699999999999999999999999999999999999997643 234899999999875422   


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHH---HHHhc--CCCCCCCCCCcCCHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISA---LHRIG--FSSDTPEIPGYMSKQA  232 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~---~~~~~--~~~~~~~~~~~~s~~~  232 (385)
                      .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.........   ...+.  ...........+++++
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (336)
T 3fhr_A          185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA  264 (336)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHH
T ss_pred             ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHH
Confidence            234557899999999999888999999999999999999999999754322110   11111  1111122234689999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          233 QDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       233 ~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ++||.+||+.||.+|||+.|+|+||||++.
T Consensus       265 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          265 KQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             HHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            999999999999999999999999999763


No 152
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=9.7e-48  Score=380.28  Aligned_cols=257  Identities=28%  Similarity=0.400  Sum_probs=188.9

Q ss_pred             cee-eceeeccCceEEEEEEEC--CCCcEEEEEeccCCC-HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            3 WTR-GQTIGRGSTATVSIGMSN--RSSEVFAVKSAELSN-SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         3 y~~-~~~LG~G~~g~Vy~a~~~--~~~~~~AvK~~~~~~-~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      |.+ ++.||+|+||+||+|+++  .+++.||||.+.... ...+.+|+.+|++++||||+++++++.......  +++||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~--~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRK--VWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE--EEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe--EEEEE
Confidence            444 668999999999999976  578999999987543 467889999999999999999999987654433  56999


Q ss_pred             eecCCCCHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC--CCCCeEEeecCc
Q 040569           79 EYAPGGTLTDAIRS---------GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD--NEQGAKIADFGC  147 (385)
Q Consensus        79 Ey~~ggsL~~~l~~---------~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~--~~~~~kL~DFG~  147 (385)
                      ||+.| +|.+++..         ...+++..++.++.||+.||+|||++||+||||||+||||..+  ....+||+|||+
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            99975 88888752         1249999999999999999999999999999999999999432  223499999999


Q ss_pred             eeeecccCC--CCCCccccCCcccChhhhcCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCh--------HHHHHHh-
Q 040569          148 ARRARVNED--DEGKPICGTPICMAPEVARGE-EQGFPADVWALGCTVLEMATGRPPWPDVADP--------ISALHRI-  215 (385)
Q Consensus       148 a~~~~~~~~--~~~~~~~Gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--------~~~~~~~-  215 (385)
                      ++.......  ......+||+.|+|||++.+. .++.++|||||||++|+|++|++||......        ...+.++ 
T Consensus       179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~  258 (405)
T 3rgf_A          179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF  258 (405)
T ss_dssp             CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHH
T ss_pred             ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHH
Confidence            987643211  223456899999999999874 5899999999999999999999999754321        1111111 


Q ss_pred             ---cCCCCC--C------------------------------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccc
Q 040569          216 ---GFSSDT--P------------------------------EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVK  260 (385)
Q Consensus       216 ---~~~~~~--~------------------------------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~  260 (385)
                         +.....  +                              ......++.+.+||.+||++||.+|||++|+|+||||.
T Consensus       259 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~  338 (405)
T 3rgf_A          259 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL  338 (405)
T ss_dssp             HHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhc
Confidence               111000  0                              00011277899999999999999999999999999998


Q ss_pred             cc
Q 040569          261 EQ  262 (385)
Q Consensus       261 ~~  262 (385)
                      ..
T Consensus       339 ~~  340 (405)
T 3rgf_A          339 ED  340 (405)
T ss_dssp             SS
T ss_pred             cC
Confidence            64


No 153
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=5.2e-48  Score=376.38  Aligned_cols=256  Identities=23%  Similarity=0.316  Sum_probs=207.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcC-----------CCCeeeeeeeeeecc
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALA-----------CPQIVAYKGCDISEE   68 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~-----------hpnIv~~~~~~~~~~   68 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+....  .+.+.+|+.+++++.           ||||+++++++....
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~   99 (373)
T 1q8y_A           20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   99 (373)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence            5999999999999999999999999999999987543  356788999999886           899999999988766


Q ss_pred             CCeEEEEEEEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCEEeecCC----CCCeE
Q 040569           69 NGKILYNLFLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSN-GIVHCDIKGQNILVSKDN----EQGAK  141 (385)
Q Consensus        69 ~~~~~~~lv~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~-givHrDlKp~NILi~~~~----~~~~k  141 (385)
                      .....++++|||+ +++|.+++..  ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++    ...+|
T Consensus       100 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~k  178 (373)
T 1q8y_A          100 PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK  178 (373)
T ss_dssp             TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEE
Confidence            5555678999999 8899999984  45699999999999999999999998 999999999999996433    12389


Q ss_pred             EeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHHh-
Q 040569          142 IADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD-----PISALHRI-  215 (385)
Q Consensus       142 L~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~-  215 (385)
                      |+|||+++....    ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....     ....+..+ 
T Consensus       179 l~Dfg~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (373)
T 1q8y_A          179 IADLGNACWYDE----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII  254 (373)
T ss_dssp             ECCCTTCEETTB----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred             EcccccccccCC----CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence            999999987632    22345799999999999999999999999999999999999999975321     11111110 


Q ss_pred             cCCC---------------------------------------CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          216 GFSS---------------------------------------DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       216 ~~~~---------------------------------------~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ....                                       ....++...++++.+||.+||+.||.+|||+.|+|+|
T Consensus       255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            0000                                       0112334457789999999999999999999999999


Q ss_pred             cccccc
Q 040569          257 GFVKEQ  262 (385)
Q Consensus       257 p~~~~~  262 (385)
                      |||++.
T Consensus       335 p~f~~~  340 (373)
T 1q8y_A          335 PWLKDT  340 (373)
T ss_dssp             GGGTTC
T ss_pred             hhhhcc
Confidence            999864


No 154
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=6.6e-48  Score=361.94  Aligned_cols=246  Identities=20%  Similarity=0.283  Sum_probs=206.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|.++ ++..||+|.+...  ..+.+.+|++++++++||||+++++++.....    +++|||
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e   99 (283)
T 3gen_A           25 DLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP----IFIITE   99 (283)
T ss_dssp             GEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS----EEEEEC
T ss_pred             HHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCC----eEEEEe
Confidence            5889999999999999999886 6778999998754  45778899999999999999999998765444    669999


Q ss_pred             ecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           80 YAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        80 y~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      |+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++.........
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~~  177 (283)
T 3gen_A          100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTS  177 (283)
T ss_dssp             CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSC--EEECSTTGGGGBCCHHHHS
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCC--EEEcccccccccccccccc
Confidence            9999999999985 567999999999999999999999999999999999999987765  9999999998653322223


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      .....||+.|+|||++.+..++.++|||||||++|+|++ |+.||.... .......+. .......+...++.+.+||.
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~  255 (283)
T 3gen_A          178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIA-QGLRLYRPHLASEKVYTIMY  255 (283)
T ss_dssp             TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHHHH-TTCCCCCCTTCCHHHHHHHH
T ss_pred             ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-hhHHHHHHh-cccCCCCCCcCCHHHHHHHH
Confidence            334457889999999998899999999999999999998 999998753 333333332 23344456678999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhC
Q 040569          238 KCLIRNPGERWSASELLEH  256 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~h  256 (385)
                      +||+.||.+|||+.|+++|
T Consensus       256 ~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          256 SCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HTTCSSGGGSCCHHHHHHH
T ss_pred             HHccCChhHCcCHHHHHHH
Confidence            9999999999999999986


No 155
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=8.5e-48  Score=363.80  Aligned_cols=249  Identities=26%  Similarity=0.383  Sum_probs=204.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHh--cCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSA--LACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~--l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|++  +++.||||++.......+.+|.+++..  ++||||+++++++.........+++|||
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e   86 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH   86 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             cEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence            589999999999999999987  589999999987777777788888887  7999999999988776555556789999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLH--------SNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH--------~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      |+++|+|.++++.. .+++..+..++.||+.||+|||        ++||+||||||+|||++.++.  +||+|||+++..
T Consensus        87 ~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfg~a~~~  163 (301)
T 3q4u_A           87 YHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ--CCIADLGLAVMH  163 (301)
T ss_dssp             CCTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSC--EEECCCTTCEEE
T ss_pred             hccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCC--EEEeeCCCeeec
Confidence            99999999999754 5999999999999999999999        999999999999999987765  999999999876


Q ss_pred             cccCCC---CCCccccCCcccChhhhcCC------CCCCCCChHHHHHHHHHHHhC----------CCCCCCCC---ChH
Q 040569          152 RVNEDD---EGKPICGTPICMAPEVARGE------EQGFPADVWALGCTVLEMATG----------RPPWPDVA---DPI  209 (385)
Q Consensus       152 ~~~~~~---~~~~~~Gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG----------~~Pf~~~~---~~~  209 (385)
                      ......   .....+||+.|+|||++.+.      .++.++|||||||++|||++|          +.||....   ...
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~  243 (301)
T 3q4u_A          164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF  243 (301)
T ss_dssp             ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence            433221   12345799999999999877      445689999999999999999          88886432   112


Q ss_pred             H-HHHHhcCCCCCCCCCC-----cCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          210 S-ALHRIGFSSDTPEIPG-----YMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       210 ~-~~~~~~~~~~~~~~~~-----~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      . ...........+.++.     ..++++.+||.+||+.||.+|||+.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            2 2222223333444432     25678999999999999999999999986


No 156
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.9e-47  Score=365.76  Aligned_cols=256  Identities=26%  Similarity=0.361  Sum_probs=208.0

Q ss_pred             CceeeceeeccCceEEEEEEEC-CCCcEEEEEeccCC-----CHHHHHHHHHHHHhc---CCCCeeeeeeeeeecc-CCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-RSSEVFAVKSAELS-----NSEFLQREQRILSAL---ACPQIVAYKGCDISEE-NGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l---~hpnIv~~~~~~~~~~-~~~   71 (385)
                      +|++.+.||+|+||+||+|++. .+++.||+|.+...     ....+.+|+.+++.+   .||||+++++++.... ...
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   91 (326)
T 1blx_A           12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   91 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred             ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence            5899999999999999999995 67899999987532     123566888888777   8999999999876322 233


Q ss_pred             EEEEEEEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                      ..+++||||+. |+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++
T Consensus        92 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~--~kl~Dfg~~~  168 (326)
T 1blx_A           92 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ--IKLADFGLAR  168 (326)
T ss_dssp             EEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECSCCSCC
T ss_pred             ceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCC--EEEecCcccc
Confidence            45779999998 5999999853  45999999999999999999999999999999999999987765  9999999998


Q ss_pred             eecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc----CC-------
Q 040569          150 RARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG----FS-------  218 (385)
Q Consensus       150 ~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~----~~-------  218 (385)
                      ......  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+.    ..       
T Consensus       169 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~  245 (326)
T 1blx_A          169 IYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWPR  245 (326)
T ss_dssp             CCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGGGSCT
T ss_pred             cccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCcccCcc
Confidence            754222  223457899999999999999999999999999999999999999875332 2222211    00       


Q ss_pred             --------------CCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          219 --------------SDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       219 --------------~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                                    .....+...+++.+++||.+||..||.+|||+.|+|+||||+...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence                          001123356899999999999999999999999999999998654


No 157
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=6.7e-48  Score=374.91  Aligned_cols=254  Identities=24%  Similarity=0.325  Sum_probs=198.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--------------HHHHHHHHHHHHhcCCCCeeeeeeeeeec
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--------------SEFLQREQRILSALACPQIVAYKGCDISE   67 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--------------~~~~~~E~~il~~l~hpnIv~~~~~~~~~   67 (385)
                      +|++++.||+|+||+||+|.+.. ++.||||.+....              .+.+.+|+++|++++||||+++++++...
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  101 (362)
T 3pg1_A           23 PYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF  101 (362)
T ss_dssp             SCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred             ceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence            69999999999999999999865 9999999875321              16788999999999999999999988654


Q ss_pred             c-CCeEEEEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeec
Q 040569           68 E-NGKILYNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADF  145 (385)
Q Consensus        68 ~-~~~~~~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DF  145 (385)
                      . .....+++||||+. |+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+||
T Consensus       102 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Df  178 (362)
T 3pg1_A          102 EEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND--ITICDF  178 (362)
T ss_dssp             CTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC--EEECCT
T ss_pred             cCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC--EEEEec
Confidence            3 23334679999998 588888874 447999999999999999999999999999999999999987766  999999


Q ss_pred             CceeeecccCCCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC-------
Q 040569          146 GCARRARVNEDDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF-------  217 (385)
Q Consensus       146 G~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~-------  217 (385)
                      |+++.....  .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.... ....+..+..       
T Consensus       179 g~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~  255 (362)
T 3pg1_A          179 NLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST-FYNQLNKIVEVVGTPKI  255 (362)
T ss_dssp             TC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCH
T ss_pred             Ccccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHcCCCCh
Confidence            999864322  22345579999999999987 678999999999999999999999998643 2222221100       


Q ss_pred             ---------------CCCCC--------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          218 ---------------SSDTP--------EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       218 ---------------~~~~~--------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                                     .....        ..+...++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence                           00000        1123468899999999999999999999999999999865


No 158
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2e-47  Score=367.29  Aligned_cols=246  Identities=20%  Similarity=0.287  Sum_probs=204.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCc---EEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSE---VFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~---~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|+++.+++   .||||.+....    .+.+.+|+.+|++++||||+++++++.....    +
T Consensus        50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~  125 (325)
T 3kul_A           50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL----A  125 (325)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC----C
T ss_pred             HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc----c
Confidence            58899999999999999999986655   59999987542    3467889999999999999999998865544    6


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||++||+|.++++. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV--CKVSDFGLSRVLED  203 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCCSSCEECC-
T ss_pred             EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCC--EEECCCCccccccc
Confidence            699999999999999974 467999999999999999999999999999999999999987665  99999999987643


Q ss_pred             cCCC--CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          154 NEDD--EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       154 ~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      ....  ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||.... .......+.. ......+..+++
T Consensus       204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~~~~~  281 (325)
T 3kul_A          204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-NRDVISSVEE-GYRLPAPMGCPH  281 (325)
T ss_dssp             ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-HHHHHHHHHT-TCCCCCCTTCCH
T ss_pred             CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHc-CCCCCCCCCcCH
Confidence            3221  1223346788999999999999999999999999999999 999997753 3333333322 334445667899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .+.+||.+||..||.+|||+.|+++
T Consensus       282 ~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          282 ALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999999987


No 159
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=7.8e-48  Score=368.50  Aligned_cols=257  Identities=20%  Similarity=0.324  Sum_probs=193.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCc---EEEEEeccCC-----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCe--
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSE---VFAVKSAELS-----NSEFLQREQRILSALACPQIVAYKGCDISEENGK--   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~---~~AvK~~~~~-----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~--   71 (385)
                      +|++++.||+|+||+||+|.++.++.   .+|||.+...     ..+.+.+|++++++++||||+++++++.......  
T Consensus        24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  103 (323)
T 3qup_A           24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL  103 (323)
T ss_dssp             -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred             HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence            58999999999999999999887775   8999988643     2356789999999999999999999887654321  


Q ss_pred             EEEEEEEeecCCCCHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeec
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSG------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADF  145 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DF  145 (385)
                      ...++||||+++|+|.+++...      ..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+||
T Consensus       104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~--~kl~Df  181 (323)
T 3qup_A          104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMT--VCVADF  181 (323)
T ss_dssp             -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC--EEECCC
T ss_pred             CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCC--EEEeec
Confidence            1236899999999999999632      15899999999999999999999999999999999999987765  999999


Q ss_pred             CceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCC
Q 040569          146 GCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPE  223 (385)
Q Consensus       146 G~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~  223 (385)
                      |+++....... .......|++.|+|||++.+..++.++|||||||++|+|++ |+.||........ ...+ .....+.
T Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~-~~~~~~~  259 (323)
T 3qup_A          182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYL-IGGNRLK  259 (323)
T ss_dssp             CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHH-HTTCCCC
T ss_pred             cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH-HHHH-hcCCCCC
Confidence            99987543222 12233457889999999999999999999999999999999 9999987544332 2222 2233445


Q ss_pred             CCCcCCHHHHHHHHHhhhcCCCCCCC-------HHHHHhCcccccc
Q 040569          224 IPGYMSKQAQDFLSKCLIRNPGERWS-------ASELLEHGFVKEQ  262 (385)
Q Consensus       224 ~~~~~s~~~~~ll~~cL~~dP~~Rps-------~~elL~hp~~~~~  262 (385)
                      .+..+++++.+||.+||+.||.+|||       ++++++|||+...
T Consensus       260 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          260 QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            56678999999999999999999999       6778889998754


No 160
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.5e-47  Score=365.46  Aligned_cols=249  Identities=23%  Similarity=0.354  Sum_probs=201.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--C---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--N---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|.++.   .+|+|.+...  .   .+.+.+|+.+|++++||||+++++++.. ..    +++
T Consensus        37 ~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~----~~l  108 (307)
T 3lb7_A           37 EVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN----LAI  108 (307)
T ss_dssp             SCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS----CEE
T ss_pred             ceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-Cc----EEE
Confidence            58899999999999999998764   4677766532  1   3567899999999999999999997532 22    558


Q ss_pred             EEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc-c
Q 040569           77 FLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV-N  154 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~-~  154 (385)
                      ||||++|++|.+++. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.... .
T Consensus       109 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~DFg~a~~~~~~~  186 (307)
T 3lb7_A          109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT--VKIGDFGLATVKSRWS  186 (307)
T ss_dssp             EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSC--EEECCCCSSCC-----
T ss_pred             EEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCC--EEEccCCCceeccccc
Confidence            999999999999997 5667999999999999999999999999999999999999987765  99999999986532 1


Q ss_pred             CCCCCCccccCCcccChhhhc---CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcC---CCCCCCCCCcC
Q 040569          155 EDDEGKPICGTPICMAPEVAR---GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGF---SSDTPEIPGYM  228 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~  228 (385)
                      .........||+.|+|||++.   +..++.++|||||||++|+|++|+.||............+..   ....+.++..+
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (307)
T 3lb7_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC  266 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSS
T ss_pred             ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCC
Confidence            122234557999999999996   556788999999999999999999999876665544433322   22333455678


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhCcccc
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEHGFVK  260 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~  260 (385)
                      ++.+.+||.+||+.||.+|||+.|++++.+..
T Consensus       267 ~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l  298 (307)
T 3lb7_A          267 PKAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             CHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999999999986643


No 161
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=3.9e-48  Score=378.62  Aligned_cols=255  Identities=24%  Similarity=0.279  Sum_probs=210.0

Q ss_pred             CceeeceeeccCceEEEEEE-----ECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGM-----SNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~-----~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|+     +..+++.||||.+....    ...+.+|+.++++++||||+++++++.....   
T Consensus        72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~---  148 (367)
T 3l9p_A           72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP---  148 (367)
T ss_dssp             GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS---
T ss_pred             HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC---
Confidence            48899999999999999999     55678899999986432    2357789999999999999999998866544   


Q ss_pred             EEEEEEeecCCCCHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC-CCeEEee
Q 040569           73 LYNLFLEYAPGGTLTDAIRSG-------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE-QGAKIAD  144 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~-------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~-~~~kL~D  144 (385)
                       .++||||++||+|.+++...       ..+++..+..++.||+.||+|||++||+||||||+|||++.++. ..+||+|
T Consensus       149 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          149 -RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             -CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             -CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECC
Confidence             56899999999999999742       35899999999999999999999999999999999999985442 2389999


Q ss_pred             cCceeeecccC-CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCC
Q 040569          145 FGCARRARVNE-DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTP  222 (385)
Q Consensus       145 FG~a~~~~~~~-~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~  222 (385)
                      ||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||... +.......+. ....+
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~-~~~~~~~~i~-~~~~~  305 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQEVLEFVT-SGGRM  305 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHH-TTCCC
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHH-cCCCC
Confidence            99998653322 223345578999999999999999999999999999999998 99999875 3344444332 33345


Q ss_pred             CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          223 EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       223 ~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ..+..+++.+.+||.+||+.||.+|||+.+++++.+....
T Consensus       306 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          306 DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            5567789999999999999999999999999999876543


No 162
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.8e-47  Score=359.22  Aligned_cols=246  Identities=23%  Similarity=0.314  Sum_probs=194.3

Q ss_pred             CceeeceeeccCceEEEEEEECCC---CcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS---SEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~---~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|++..+   +..+|+|.+....    .+.+.+|+.++++++||||+++++++.. ..    +
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~----~   90 (281)
T 1mp8_A           16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP----V   90 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS----C
T ss_pred             HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-Cc----c
Confidence            588999999999999999998654   5679999886532    3467789999999999999999998632 22    5


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++|+|.+++.. +..+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMED  168 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECC---------
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCC--EEECccccccccCc
Confidence            589999999999999984 446999999999999999999999999999999999999997766  99999999987644


Q ss_pred             cCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHH
Q 040569          154 NEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQA  232 (385)
Q Consensus       154 ~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  232 (385)
                      ..........||+.|+|||++.+..++.++|||||||++|+|++ |..||...... .....+. ....+..+..+++++
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-~~~~~i~-~~~~~~~~~~~~~~l  246 (281)
T 1mp8_A          169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIE-NGERLPMPPNCPPTL  246 (281)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHH-TTCCCCCCTTCCHHH
T ss_pred             ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-HHHHHHH-cCCCCCCCCCCCHHH
Confidence            33333334467889999999998899999999999999999997 99999875433 3333332 223345667799999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          233 QDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       233 ~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      .+||.+||..||.+|||+.|++++
T Consensus       247 ~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          247 YSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999999874


No 163
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.5e-47  Score=363.59  Aligned_cols=252  Identities=27%  Similarity=0.435  Sum_probs=207.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcC--CCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALA--CPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|.+. +++.||||.+....     .+.+.+|+.+++++.  ||||+++++++.....    +
T Consensus        29 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~----~  103 (313)
T 3cek_A           29 IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY----I  103 (313)
T ss_dssp             EEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE----E
T ss_pred             eEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE----E
Confidence            4899999999999999999985 58999999886432     356789999999996  5999999998765432    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++. +  .+||+|||+++.....
T Consensus       104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~--~~kL~Dfg~~~~~~~~  179 (313)
T 3cek_A          104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G--MLKLIDFGIANQMQPD  179 (313)
T ss_dssp             EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-T--EEEECCCSSSCC----
T ss_pred             EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-C--eEEEeeccccccccCc
Confidence            79999 557899999998888999999999999999999999999999999999999963 3  3999999999876432


Q ss_pred             CCC-CCCccccCCcccChhhhcC-----------CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCC
Q 040569          155 EDD-EGKPICGTPICMAPEVARG-----------EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTP  222 (385)
Q Consensus       155 ~~~-~~~~~~Gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  222 (385)
                      ... ......||+.|+|||++.+           ..++.++|||||||++|+|++|+.||....+....+..+.......
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  259 (313)
T 3cek_A          180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  259 (313)
T ss_dssp             ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred             cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc
Confidence            221 1234579999999999976           4678899999999999999999999987666655555554444455


Q ss_pred             CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          223 EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       223 ~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      .++...++++.+||.+||..||.+|||+.|+|+||||+..
T Consensus       260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence            6677789999999999999999999999999999999754


No 164
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=9.8e-48  Score=365.82  Aligned_cols=258  Identities=24%  Similarity=0.312  Sum_probs=200.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH---HHHHHHHHHHHhcCCCCeeeeeeeeeecc----------
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS---EFLQREQRILSALACPQIVAYKGCDISEE----------   68 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~---~~~~~E~~il~~l~hpnIv~~~~~~~~~~----------   68 (385)
                      +|++++.||+|+||+||+|.++.+++.||+|.+.....   +.+.+|++++++++||||+++++++....          
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   91 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL   91 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred             ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence            58999999999999999999999999999998876543   45778999999999999999998864321          


Q ss_pred             CCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCce
Q 040569           69 NGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCA  148 (385)
Q Consensus        69 ~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a  148 (385)
                      .....+++||||++ |+|.+++.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++ ..+||+|||++
T Consensus        92 ~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~kl~Dfg~~  168 (320)
T 2i6l_A           92 TELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED-LVLKIGDFGLA  168 (320)
T ss_dssp             CSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-TEEEECCCTTC
T ss_pred             cccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CeEEEccCccc
Confidence            11223679999998 599999975 4599999999999999999999999999999999999997432 23899999999


Q ss_pred             eeecccC--CCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCC------
Q 040569          149 RRARVNE--DDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSS------  219 (385)
Q Consensus       149 ~~~~~~~--~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~------  219 (385)
                      +......  ........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ......+....      
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~  247 (320)
T 2i6l_A          169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-LEQMQLILESIPVVHEE  247 (320)
T ss_dssp             BCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHSCCCCHH
T ss_pred             cccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCchh
Confidence            8753221  122344568999999999876 6788999999999999999999999987533 22222211000      


Q ss_pred             ----------------------CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          220 ----------------------DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       220 ----------------------~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                                            .....+..+++++++||.+||+.||.+|||+.|+|+||||+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          248 DRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             hhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence                                  00112245799999999999999999999999999999998643


No 165
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.4e-47  Score=363.78  Aligned_cols=247  Identities=23%  Similarity=0.311  Sum_probs=196.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------SEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|.++.+++.||+|.+....      .+.+.+|+.++++++||||+++++++.....    ++
T Consensus        35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~----~~  110 (309)
T 2h34_A           35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ----LY  110 (309)
T ss_dssp             CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE----EE
T ss_pred             cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe----EE
Confidence            5999999999999999999999999999999986431      2567899999999999999999998866443    66


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++.......
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF--AYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC--EEECSCCC--------
T ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCC--EEEecCccCccccccc
Confidence            99999999999999997778999999999999999999999999999999999999987765  9999999998764433


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC-CCCCCCCCcCCHHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS-SDTPEIPGYMSKQAQD  234 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~  234 (385)
                      ........||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+... ......+..+|+++.+
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~  267 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDA  267 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHH
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHH
Confidence            33334567999999999999999999999999999999999999999764322 222222211 2223445678999999


Q ss_pred             HHHHhhhcCCCCCC-CHHHHHh
Q 040569          235 FLSKCLIRNPGERW-SASELLE  255 (385)
Q Consensus       235 ll~~cL~~dP~~Rp-s~~elL~  255 (385)
                      ||.+||++||.+|| |++++++
T Consensus       268 li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          268 VIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHhccCCHHHHHHhHHHHHH
Confidence            99999999999999 8888775


No 166
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-47  Score=367.74  Aligned_cols=247  Identities=23%  Similarity=0.285  Sum_probs=207.5

Q ss_pred             CceeeceeeccCceEEEEEEEC-----CCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-----RSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|+++     .+++.||||.+....    .+.+.+|+.++++++||||+++++++.....   
T Consensus        48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---  124 (343)
T 1luf_A           48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP---  124 (343)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS---
T ss_pred             HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc---
Confidence            5899999999999999999987     456899999987543    3567899999999999999999998866444   


Q ss_pred             EEEEEEeecCCCCHHHHHHcC------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 040569           73 LYNLFLEYAPGGTLTDAIRSG------------------------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQ  128 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~------------------------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~  128 (385)
                       +++||||+++|+|.+++...                        ..+++..+..++.||+.||.|||++||+||||||+
T Consensus       125 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~  203 (343)
T 1luf_A          125 -MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR  203 (343)
T ss_dssp             -CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             -eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcc
Confidence             66899999999999999752                        56999999999999999999999999999999999


Q ss_pred             CEEeecCCCCCeEEeecCceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCC
Q 040569          129 NILVSKDNEQGAKIADFGCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVA  206 (385)
Q Consensus       129 NILi~~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~  206 (385)
                      |||++.++.  +||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||... 
T Consensus       204 NIl~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-  280 (343)
T 1luf_A          204 NCLVGENMV--VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-  280 (343)
T ss_dssp             GEEECGGGC--EEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-
T ss_pred             eEEECCCCe--EEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-
Confidence            999987766  99999999986532221 22334568999999999999899999999999999999999 99999874 


Q ss_pred             ChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          207 DPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ........+. ....+..+..+++++.+||.+||..||.+|||+.+++++
T Consensus       281 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          281 AHEEVIYYVR-DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             CHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ChHHHHHHHh-CCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            3333333332 334455677899999999999999999999999999874


No 167
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.1e-47  Score=362.95  Aligned_cols=250  Identities=24%  Similarity=0.343  Sum_probs=202.0

Q ss_pred             CceeeceeeccCceEEEEEE----ECCCCcEEEEEeccCCCH---HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGM----SNRSSEVFAVKSAELSNS---EFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~----~~~~~~~~AvK~~~~~~~---~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+    +..+++.||||.+.....   +.+.+|+++|++++||||+++++++.......  +
T Consensus        11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--~   88 (295)
T 3ugc_A           11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN--L   88 (295)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS--C
T ss_pred             HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc--e
Confidence            58999999999999999998    667899999999876554   46779999999999999999999876543322  5


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQ  166 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCCCSCC----
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCe--EEEccCcccccccC
Confidence            589999999999999985 345999999999999999999999999999999999999998766  99999999987643


Q ss_pred             cCC--CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChH--------------HHHHHhcC
Q 040569          154 NED--DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPI--------------SALHRIGF  217 (385)
Q Consensus       154 ~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--------------~~~~~~~~  217 (385)
                      ...  .......|++.|+|||++.+..++.++|||||||++|+|++|..||.......              ........
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (295)
T 3ugc_A          167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK  246 (295)
T ss_dssp             ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred             CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence            221  12233457788999999999999999999999999999999999986421100              01111112


Q ss_pred             CCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          218 SSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       218 ~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .......+..+++++.+||.+||+.||.+|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          247 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            23344557778999999999999999999999999986


No 168
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2.7e-47  Score=362.45  Aligned_cols=247  Identities=23%  Similarity=0.346  Sum_probs=206.7

Q ss_pred             CceeeceeeccCceEEEEEEE-----CCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMS-----NRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|.+     +.+++.+|+|.+....    .+.+.+|+++|++++||||+++++++.....   
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---  100 (314)
T 2ivs_A           24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP---  100 (314)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS---
T ss_pred             heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc---
Confidence            588999999999999999998     3456899999987543    2467789999999999999999998765544   


Q ss_pred             EEEEEEeecCCCCHHHHHHcCC------------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 040569           73 LYNLFLEYAPGGTLTDAIRSGT------------------------CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQ  128 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~~------------------------~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~  128 (385)
                       +++||||++||+|.+++....                        .+++..+..++.||+.||.|||++||+||||||+
T Consensus       101 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  179 (314)
T 2ivs_A          101 -LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR  179 (314)
T ss_dssp             -CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             -eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchh
Confidence             668999999999999998543                        3899999999999999999999999999999999


Q ss_pred             CEEeecCCCCCeEEeecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCC
Q 040569          129 NILVSKDNEQGAKIADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVA  206 (385)
Q Consensus       129 NILi~~~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~  206 (385)
                      |||++.++.  +||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||....
T Consensus       180 NIli~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          180 NILVAEGRK--MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GEEEETTTE--EEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             eEEEcCCCC--EEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999997765  999999999876432211 2234467889999999999999999999999999999999 999998653


Q ss_pred             ChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          207 DPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      . ......+ .....+..+..+++++.+||.+||+.||.+|||+.+++++
T Consensus       258 ~-~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          258 P-ERLFNLL-KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             G-GGHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             H-HHHHHHh-hcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3 2222222 2233455677799999999999999999999999999875


No 169
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=5.6e-47  Score=356.34  Aligned_cols=244  Identities=25%  Similarity=0.351  Sum_probs=205.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH----------HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS----------EFLQREQRILSALACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~----------~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++.+.||+|+||+||+|+++.+++.||+|.+.....          +.+.+|+.++++++||||+++++++....   
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---   96 (287)
T 4f0f_A           20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP---   96 (287)
T ss_dssp             TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT---
T ss_pred             cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC---
Confidence            58999999999999999999999999999998854321          57889999999999999999999864332   


Q ss_pred             EEEEEEEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCEEeecCCCC---CeEEeec
Q 040569           72 ILYNLFLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNG--IVHCDIKGQNILVSKDNEQ---GAKIADF  145 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~g--ivHrDlKp~NILi~~~~~~---~~kL~DF  145 (385)
                         ++||||+++|+|.+.+. ....+++..+..++.||+.||+|||++|  |+||||||+|||++.++..   .+||+||
T Consensus        97 ---~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           97 ---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             ---EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             ---eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence               38999999999999887 4457999999999999999999999999  9999999999999765432   2899999


Q ss_pred             CceeeecccCCCCCCccccCCcccChhhhc--CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChH-HHHHHhcCCCCCC
Q 040569          146 GCARRARVNEDDEGKPICGTPICMAPEVAR--GEEQGFPADVWALGCTVLEMATGRPPWPDVADPI-SALHRIGFSSDTP  222 (385)
Q Consensus       146 G~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~~~~~~~~~~  222 (385)
                      |+++....    ......||+.|+|||++.  ...++.++|||||||++|+|++|+.||....... .....+......+
T Consensus       174 g~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  249 (287)
T 4f0f_A          174 GLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP  249 (287)
T ss_dssp             TTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC
T ss_pred             Cccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC
Confidence            99985422    233457999999999994  4557889999999999999999999997654332 2233333445556


Q ss_pred             CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          223 EIPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       223 ~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .++..+++++.+||.+||+.||.+|||+.|+++
T Consensus       250 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            677889999999999999999999999999986


No 170
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.2e-47  Score=368.02  Aligned_cols=249  Identities=22%  Similarity=0.271  Sum_probs=201.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH--HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS--EFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~--~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|++.  ++.||||++.....  ...++|+.+|++++||||+++++++.........+++|||
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e  102 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA  102 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             hchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence            5899999999999999999876  89999999876544  3455688889999999999999998876554445679999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC----------CceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSN----------GIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~----------givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                      |+++|+|.++++.+. +++..+..++.||+.||+|||++          ||+||||||+|||++.++.  +||+|||+++
T Consensus       103 ~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~--~kL~DFg~a~  179 (322)
T 3soc_A          103 FHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT--ACIADFGLAL  179 (322)
T ss_dssp             CCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCC--EEECCCTTCE
T ss_pred             cCCCCCHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCe--EEEccCCccc
Confidence            999999999998654 99999999999999999999999          9999999999999987765  9999999998


Q ss_pred             eecccCCC-CCCccccCCcccChhhhcCC-----CCCCCCChHHHHHHHHHHHhCCCCCCCCCC---------------h
Q 040569          150 RARVNEDD-EGKPICGTPICMAPEVARGE-----EQGFPADVWALGCTVLEMATGRPPWPDVAD---------------P  208 (385)
Q Consensus       150 ~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltG~~Pf~~~~~---------------~  208 (385)
                      ........ .....+||+.|+|||++.+.     .++.++|||||||++|+|++|+.||....+               .
T Consensus       180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  259 (322)
T 3soc_A          180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL  259 (322)
T ss_dssp             EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred             ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence            76543322 23346799999999999873     456688999999999999999999965321               1


Q ss_pred             HHHHHHhcCCCCCCCCCCc-----CCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          209 ISALHRIGFSSDTPEIPGY-----MSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~-----~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ......+......+.++..     .++++.+||.+||+.||.+|||+.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            1222222222333333322     2456999999999999999999999987


No 171
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.1e-47  Score=368.66  Aligned_cols=253  Identities=20%  Similarity=0.254  Sum_probs=200.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCC-cEEEEEeccCCC--HHHHHHHHHHHHhcCCCC------eeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSS-EVFAVKSAELSN--SEFLQREQRILSALACPQ------IVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~-~~~AvK~~~~~~--~~~~~~E~~il~~l~hpn------Iv~~~~~~~~~~~~~~   72 (385)
                      +|++.+.||+|+||+||+|+++.++ +.||+|++....  .+.+.+|+.+++++.|++      ++.+++++.....   
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~---   96 (355)
T 2eu9_A           20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH---   96 (355)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE---
T ss_pred             cEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe---
Confidence            5899999999999999999998877 789999987543  356778999999997665      8888887665443   


Q ss_pred             EEEEEEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC---------------
Q 040569           73 LYNLFLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD---------------  135 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~---------------  135 (385)
                       +++||||+ +++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||+..+               
T Consensus        97 -~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~  174 (355)
T 2eu9_A           97 -MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK  174 (355)
T ss_dssp             -EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred             -EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccc
Confidence             67999999 56777777633  469999999999999999999999999999999999999432               


Q ss_pred             --CCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHH
Q 040569          136 --NEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALH  213 (385)
Q Consensus       136 --~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~  213 (385)
                        ....+||+|||+++....    ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus       175 ~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  250 (355)
T 2eu9_A          175 SVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM  250 (355)
T ss_dssp             EESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence              233499999999986432    23455799999999999999999999999999999999999999986543222111


Q ss_pred             HhcCCCCCC-----------------------------------------CCCCcCCHHHHHHHHHhhhcCCCCCCCHHH
Q 040569          214 RIGFSSDTP-----------------------------------------EIPGYMSKQAQDFLSKCLIRNPGERWSASE  252 (385)
Q Consensus       214 ~~~~~~~~~-----------------------------------------~~~~~~s~~~~~ll~~cL~~dP~~Rps~~e  252 (385)
                      ........|                                         ......++++.+||.+||+.||.+|||+.|
T Consensus       251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  330 (355)
T 2eu9_A          251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE  330 (355)
T ss_dssp             HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence            100000000                                         001122468899999999999999999999


Q ss_pred             HHhCccccccc
Q 040569          253 LLEHGFVKEQN  263 (385)
Q Consensus       253 lL~hp~~~~~~  263 (385)
                      +|+||||+...
T Consensus       331 ~l~hp~f~~~~  341 (355)
T 2eu9_A          331 ALLHPFFAGLT  341 (355)
T ss_dssp             HTTSGGGGGCC
T ss_pred             HhcChhhcCCC
Confidence            99999998754


No 172
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=1e-47  Score=376.91  Aligned_cols=246  Identities=25%  Similarity=0.378  Sum_probs=206.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH----HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS----EFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~----~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++++.||+|+||+||+|.++.+++.||||.+.....    +.+.+|+++|++++||||+++++++.....    +++|
T Consensus       115 ~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~lv  190 (377)
T 3cbl_A          115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP----IYIV  190 (377)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS----CEEE
T ss_pred             HeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC----cEEE
Confidence            47889999999999999999999999999999865422    346689999999999999999999865544    6699


Q ss_pred             EeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC
Q 040569           78 LEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      |||++||+|.++++. +..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.......
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~--~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV--LKISDFGMSREEADGVY  268 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCGGGCEECTTSEE
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCc--EEECcCCCceecCCCce
Confidence            999999999999984 446999999999999999999999999999999999999987765  99999999986532211


Q ss_pred             C-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          157 D-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       157 ~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                      . ......+++.|+|||++.+..++.++|||||||++|||++ |..||..... ......+. .......|..+++++.+
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~l~~  346 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-QQTREFVE-KGGRLPCPELCPDAVFR  346 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH-HHHHHHHH-TTCCCCCCTTCCHHHHH
T ss_pred             eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-cCCCCCCCCCCCHHHHH
Confidence            1 1122346778999999998899999999999999999998 9999987543 23332332 23344556778999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHh
Q 040569          235 FLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ||.+||+.||.+|||+.++++
T Consensus       347 li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          347 LMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCCchhCcCHHHHHH
Confidence            999999999999999999986


No 173
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=4.6e-47  Score=353.74  Aligned_cols=244  Identities=26%  Similarity=0.424  Sum_probs=198.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-------SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|.+.  ++.+|||.+....       .+.+++|+++++.++||||+++++++.....    +
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~   81 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN----L   81 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC------C
T ss_pred             heeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc----e
Confidence            6899999999999999999985  8899999886432       3568899999999999999999998765443    6


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCCCCEEeecCC------CCCeEEeec
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNG---IVHCDIKGQNILVSKDN------EQGAKIADF  145 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~g---ivHrDlKp~NILi~~~~------~~~~kL~DF  145 (385)
                      ++||||++|++|.+++.. +.+++..+..++.||+.||.|||++|   |+||||||+|||++.+.      ...+||+||
T Consensus        82 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           82 CLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            699999999999999874 46999999999999999999999999   89999999999997531      234899999


Q ss_pred             CceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCC
Q 040569          146 GCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIP  225 (385)
Q Consensus       146 G~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  225 (385)
                      |+++......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+.........+
T Consensus       161 g~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~  236 (271)
T 3dtc_A          161 GLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-GLAVAYGVAMNKLALPIP  236 (271)
T ss_dssp             CC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-HHHHHHHHHTSCCCCCCC
T ss_pred             Cccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHhhhcCCCCCCCC
Confidence            9998653222   234579999999999999999999999999999999999999998754 333344443444455667


Q ss_pred             CcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          226 GYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       226 ~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ..+++.+.+||.+||+.||.+|||+.|++++
T Consensus       237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            7899999999999999999999999999975


No 174
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=2.3e-47  Score=374.80  Aligned_cols=251  Identities=25%  Similarity=0.366  Sum_probs=201.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcC-CC-----CeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALA-CP-----QIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~-hp-----nIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||++....  ...+++|+++++.+. |+     +|+++++++.....    
T Consensus        55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~----  130 (382)
T 2vx3_A           55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH----  130 (382)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE----
T ss_pred             eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc----
Confidence            5899999999999999999999999999999997543  356678999999884 55     48999888766543    


Q ss_pred             EEEEEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           74 YNLFLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLH--SNGIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH--~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                      +++||||+.+ +|.+++...  +.+++..++.++.||+.||.|||  +.||+||||||+|||++.+....+||+|||+++
T Consensus       131 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~  209 (382)
T 2vx3_A          131 LCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC  209 (382)
T ss_dssp             EEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             eEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence            6799999965 999999853  46999999999999999999999  469999999999999976555559999999998


Q ss_pred             eecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCC-CCC-------
Q 040569          150 RARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFS-SDT-------  221 (385)
Q Consensus       150 ~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-~~~-------  221 (385)
                      ....    .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...+..+... ...       
T Consensus       210 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~  284 (382)
T 2vx3_A          210 QLGQ----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE-VDQMNKIVEVLGIPPAHILDQ  284 (382)
T ss_dssp             ETTC----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTT
T ss_pred             eccc----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHh
Confidence            7632    23456799999999999999999999999999999999999999986533 2222221100 000       


Q ss_pred             -----------C--------------CC--CC---------------------------cCCHHHHHHHHHhhhcCCCCC
Q 040569          222 -----------P--------------EI--PG---------------------------YMSKQAQDFLSKCLIRNPGER  247 (385)
Q Consensus       222 -----------~--------------~~--~~---------------------------~~s~~~~~ll~~cL~~dP~~R  247 (385)
                                 +              ..  +.                           ..++++++||.+||+.||.+|
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R  364 (382)
T 2vx3_A          285 APKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTR  364 (382)
T ss_dssp             CTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTS
T ss_pred             hHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhC
Confidence                       0              00  00                           001478999999999999999


Q ss_pred             CCHHHHHhCcccccc
Q 040569          248 WSASELLEHGFVKEQ  262 (385)
Q Consensus       248 ps~~elL~hp~~~~~  262 (385)
                      ||+.|+|+||||+..
T Consensus       365 pta~e~L~hp~f~~~  379 (382)
T 2vx3_A          365 IQPYYALQHSFFKKT  379 (382)
T ss_dssp             CCHHHHTTSGGGCC-
T ss_pred             CCHHHHhcCcccccC
Confidence            999999999999753


No 175
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=2.6e-47  Score=358.49  Aligned_cols=246  Identities=23%  Similarity=0.329  Sum_probs=209.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC--HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN--SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~--~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.++.+++.+|+|.+....  .+.+.+|++++++++||||+++++++.....    +++|||
T Consensus        14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~~v~e   89 (288)
T 3kfa_A           14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP----FYIITE   89 (288)
T ss_dssp             GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----EEEEEE
T ss_pred             ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC----EEEEEE
Confidence            5889999999999999999999999999999987553  4678899999999999999999998765544    679999


Q ss_pred             ecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           80 YAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        80 y~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |++|++|.+++..  ...+++..+..++.||+.||+|||++||+||||||+||+++.++.  +||+|||++.........
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~~  167 (288)
T 3kfa_A           90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYT  167 (288)
T ss_dssp             CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGC--EEECCCCGGGTSCSSSSE
T ss_pred             cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCC--EEEccCccceeccCCccc
Confidence            9999999999985  345999999999999999999999999999999999999987765  999999999865433322


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFL  236 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  236 (385)
                      ......||+.|+|||++.+..++.++|||||||++|+|++ |..||...... .....+ .....+..+..+++.+.+||
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~li  245 (288)
T 3kfa_A          168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELL-EKDYRMERPEGCPEKVYELM  245 (288)
T ss_dssp             EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHH-HTTCCCCCCTTCCHHHHHHH
T ss_pred             cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHH-hccCCCCCCCCCCHHHHHHH
Confidence            3344567889999999999999999999999999999999 99999865332 222222 12334455677899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHh
Q 040569          237 SKCLIRNPGERWSASELLE  255 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~  255 (385)
                      .+||..||.+|||+.|+++
T Consensus       246 ~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          246 RACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCChhhCcCHHHHHH
Confidence            9999999999999999986


No 176
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=6.7e-47  Score=357.14  Aligned_cols=250  Identities=21%  Similarity=0.252  Sum_probs=206.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+... ..+.+.+|+.+++++ .|||++++++++.....    +++|||
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~----~~lv~e   86 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH----NVLVID   86 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE----EEEEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce----eEEEEE
Confidence            599999999999999999999999999999988643 345678999999999 89999999988755433    669999


Q ss_pred             ecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC---CCeEEeecCceeeecccC
Q 040569           80 YAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE---QGAKIADFGCARRARVNE  155 (385)
Q Consensus        80 y~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~---~~~kL~DFG~a~~~~~~~  155 (385)
                      |+ |++|.+++.. +..+++..+..++.||+.||+|||++||+||||||+|||++.++.   ..+||+|||+++......
T Consensus        87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~  165 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  165 (298)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence            99 9999999985 446999999999999999999999999999999999999976542   238999999998765332


Q ss_pred             CC------CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHh---cCCCCCCCC
Q 040569          156 DD------EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA--DPISALHRI---GFSSDTPEI  224 (385)
Q Consensus       156 ~~------~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~--~~~~~~~~~---~~~~~~~~~  224 (385)
                      ..      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....  ........+   ......+..
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (298)
T 1csn_A          166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL  245 (298)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred             ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHH
Confidence            21      2345679999999999999999999999999999999999999997643  222222222   111222233


Q ss_pred             CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          225 PGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       225 ~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ...+++++.+||.+||..||.+|||+.++++.
T Consensus       246 ~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          246 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            44689999999999999999999999999863


No 177
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.5e-47  Score=365.72  Aligned_cols=249  Identities=23%  Similarity=0.287  Sum_probs=207.1

Q ss_pred             CceeeceeeccCceEEEEEEE-----CCCCcEEEEEeccCC----CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMS-----NRSSEVFAVKSAELS----NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~~AvK~~~~~----~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++++.||+|+||+||+|.+     ..++..||+|.+...    ..+.+.+|+.+|+++ .||||+++++++.....  
T Consensus        46 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--  123 (344)
T 1rjb_A           46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP--  123 (344)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred             HceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc--
Confidence            578899999999999999997     346778999998643    235788999999999 99999999998866544  


Q ss_pred             EEEEEEEeecCCCCHHHHHHcCC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSGT-----------------------CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQ  128 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~~-----------------------~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~  128 (385)
                        +++||||++||+|.+++....                       .+++..+..++.||+.||.|||++||+||||||+
T Consensus       124 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~  201 (344)
T 1rjb_A          124 --IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR  201 (344)
T ss_dssp             --CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred             --cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence              669999999999999998532                       3799999999999999999999999999999999


Q ss_pred             CEEeecCCCCCeEEeecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCC
Q 040569          129 NILVSKDNEQGAKIADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVA  206 (385)
Q Consensus       129 NILi~~~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~  206 (385)
                      |||++.++.  +||+|||++......... ......||+.|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus       202 NIll~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          202 NVLVTHGKV--VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GEEEETTTE--EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hEEEcCCCc--EEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            999987765  999999999876433221 1234467889999999999999999999999999999998 999998765


Q ss_pred             ChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCc
Q 040569          207 DPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHG  257 (385)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp  257 (385)
                      ........+ .....+..+..+++++.+||.+||..||.+|||+.++++|.
T Consensus       280 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          280 VDANFYKLI-QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             CSHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            443333222 23334556677899999999999999999999999999864


No 178
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5.3e-47  Score=352.26  Aligned_cols=246  Identities=22%  Similarity=0.323  Sum_probs=208.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.+. +++.+|+|.+...  ..+.+.+|++++++++||||+++++++.....    +++|||
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e   83 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP----ICLVTE   83 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS----CEEEEC
T ss_pred             heeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC----eEEEEe
Confidence            5889999999999999999986 6788999998754  45778999999999999999999998766544    668999


Q ss_pred             ecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           80 YAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        80 y~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      |+++++|.+++.. .+.+++..+..++.||+.||.|||++|++||||||+||+++.++.  +||+|||++..........
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~--~kl~dfg~~~~~~~~~~~~  161 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQYTS  161 (267)
T ss_dssp             CCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGC--EEECCTTGGGGBCCHHHHS
T ss_pred             CCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCC--EEEcccccccccccccccc
Confidence            9999999999985 456899999999999999999999999999999999999987766  9999999998653222222


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      .....|++.|+|||++.+..++.++||||||+++|+|++ |+.||... +.......+.. ...+..+...++.+.+|+.
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~i~~-~~~~~~~~~~~~~l~~li~  239 (267)
T 3t9t_A          162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDIST-GFRLYKPRLASTHVYQIMN  239 (267)
T ss_dssp             TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHT-TCCCCCCTTSCHHHHHHHH
T ss_pred             cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-CHHHHHHHHhc-CCcCCCCccCcHHHHHHHH
Confidence            334467889999999998889999999999999999999 89999764 33333333322 2334456678999999999


Q ss_pred             HhhhcCCCCCCCHHHHHhC
Q 040569          238 KCLIRNPGERWSASELLEH  256 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~h  256 (385)
                      +||+.||.+|||+.+++++
T Consensus       240 ~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          240 HCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCChhhCcCHHHHHHH
Confidence            9999999999999999874


No 179
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.1e-47  Score=366.11  Aligned_cols=248  Identities=20%  Similarity=0.259  Sum_probs=202.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+... ..+.+.+|+++++++ .||||+++++++.....    .++|||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~----~~lv~e   85 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY----NAMVLE   85 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE----EEEEEE
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc----cEEEEE
Confidence            699999999999999999999999999999988643 345688999999999 99999999998766432    679999


Q ss_pred             ecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCC---CeEEeecCceeeecccC
Q 040569           80 YAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQ---GAKIADFGCARRARVNE  155 (385)
Q Consensus        80 y~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~---~~kL~DFG~a~~~~~~~  155 (385)
                      |+ |++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||++.++..   .+||+|||+++......
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~  164 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE  164 (330)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred             eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence            99 9999999985 5679999999999999999999999999999999999999765432   28999999999764332


Q ss_pred             CC------CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHhc---CCCCCCCC
Q 040569          156 DD------EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA--DPISALHRIG---FSSDTPEI  224 (385)
Q Consensus       156 ~~------~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~--~~~~~~~~~~---~~~~~~~~  224 (385)
                      ..      .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||....  +.......+.   ........
T Consensus       165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~  244 (330)
T 2izr_A          165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL  244 (330)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHH
T ss_pred             CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHH
Confidence            21      1245689999999999999999999999999999999999999998643  2222222221   11111111


Q ss_pred             CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          225 PGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       225 ~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ....+ ++.+||.+||..||.+||++.++++
T Consensus       245 ~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          245 CENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             hccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            12234 9999999999999999999998876


No 180
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-46  Score=369.47  Aligned_cols=247  Identities=23%  Similarity=0.334  Sum_probs=207.7

Q ss_pred             CceeeceeeccCceEEEEEEECCC-------CcEEEEEeccCCC----HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS-------SEVFAVKSAELSN----SEFLQREQRILSAL-ACPQIVAYKGCDISEEN   69 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~-------~~~~AvK~~~~~~----~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~   69 (385)
                      +|++++.||+|+||+||+|.+..+       +..+|||++....    ...+.+|+++++++ +||||+++++++.....
T Consensus        70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~  149 (382)
T 3tt0_A           70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP  149 (382)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCc
Confidence            478899999999999999997543       3679999987543    24577999999999 99999999998866544


Q ss_pred             CeEEEEEEEeecCCCCHHHHHHcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee
Q 040569           70 GKILYNLFLEYAPGGTLTDAIRSG----------------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS  133 (385)
Q Consensus        70 ~~~~~~lv~Ey~~ggsL~~~l~~~----------------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~  133 (385)
                          +++||||++||+|.+++...                ..+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus       150 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  225 (382)
T 3tt0_A          150 ----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT  225 (382)
T ss_dssp             ----CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             ----eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEc
Confidence                56999999999999999853                3599999999999999999999999999999999999998


Q ss_pred             cCCCCCeEEeecCceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHH
Q 040569          134 KDNEQGAKIADFGCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISA  211 (385)
Q Consensus       134 ~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~  211 (385)
                      .++.  +||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||... +....
T Consensus       226 ~~~~--~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~-~~~~~  302 (382)
T 3tt0_A          226 EDNV--MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL  302 (382)
T ss_dssp             TTCC--EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHH
T ss_pred             CCCc--EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-CHHHH
Confidence            7765  99999999986643221 22334467899999999999999999999999999999999 99999864 33333


Q ss_pred             HHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          212 LHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       212 ~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ...+ .....+..+..+++++.+||.+||+.||.+|||+.|++++
T Consensus       303 ~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          303 FKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHH-HTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHH-HcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3333 3344555677899999999999999999999999999986


No 181
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.9e-47  Score=370.21  Aligned_cols=253  Identities=21%  Similarity=0.280  Sum_probs=199.3

Q ss_pred             CceeeceeeccCceEEEEEEECC---CCcEEEEEeccCCCH--------------HHHHHHHHHHHhcCCCCeeeeeeee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNR---SSEVFAVKSAELSNS--------------EFLQREQRILSALACPQIVAYKGCD   64 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~---~~~~~AvK~~~~~~~--------------~~~~~E~~il~~l~hpnIv~~~~~~   64 (385)
                      +|++++.||+|+||+||+|+++.   ++..+|+|.......              ..+.+|+.+++.+.||||+++++++
T Consensus        38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~  117 (345)
T 2v62_A           38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSG  117 (345)
T ss_dssp             EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEE
T ss_pred             eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccc
Confidence            58999999999999999999987   889999998865431              2345688889999999999999998


Q ss_pred             eeccCCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEee
Q 040569           65 ISEENGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIAD  144 (385)
Q Consensus        65 ~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~D  144 (385)
                      .....+...+++||||+ |++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++...+||+|
T Consensus       118 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~D  196 (345)
T 2v62_A          118 LTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLAD  196 (345)
T ss_dssp             EEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECC
T ss_pred             ccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEe
Confidence            77544445578999999 99999999876689999999999999999999999999999999999999887644599999


Q ss_pred             cCceeeecccCCCC------CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-ChHHHHHH-hc
Q 040569          145 FGCARRARVNEDDE------GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA-DPISALHR-IG  216 (385)
Q Consensus       145 FG~a~~~~~~~~~~------~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-~~~~~~~~-~~  216 (385)
                      ||+++.........      .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.... +....... ..
T Consensus       197 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~  276 (345)
T 2v62_A          197 YGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTN  276 (345)
T ss_dssp             CTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHH
T ss_pred             CCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHh
Confidence            99998764332211      134579999999999999999999999999999999999999995422 22211111 11


Q ss_pred             CCCCCCC------CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          217 FSSDTPE------IPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       217 ~~~~~~~------~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .....+.      ....+++++++||.+||..||.+|||+.++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          277 LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            1111111      01258899999999999999999999999987


No 182
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=5.3e-48  Score=370.30  Aligned_cols=243  Identities=24%  Similarity=0.349  Sum_probs=206.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---------HHHHHHHHHHHHhcC--CCCeeeeeeeeeeccCC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---------SEFLQREQRILSALA--CPQIVAYKGCDISEENG   70 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---------~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~   70 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+....         .+.+.+|+.+++++.  ||||+++++++..... 
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~-  122 (320)
T 3a99_A           44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS-  122 (320)
T ss_dssp             TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE-
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc-
Confidence            5999999999999999999999999999999886431         245668999999996  5999999998765443 


Q ss_pred             eEEEEEEEeecCC-CCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee-cCCCCCeEEeecCce
Q 040569           71 KILYNLFLEYAPG-GTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS-KDNEQGAKIADFGCA  148 (385)
Q Consensus        71 ~~~~~lv~Ey~~g-gsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~-~~~~~~~kL~DFG~a  148 (385)
                         +++||||+.+ ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++ .++.  +||+|||++
T Consensus       123 ---~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~--~kL~Dfg~~  197 (320)
T 3a99_A          123 ---FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSG  197 (320)
T ss_dssp             ---EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTE--EEECCCTTC
T ss_pred             ---EEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCC--EEEeeCccc
Confidence               6689999976 89999999777899999999999999999999999999999999999998 4444  999999999


Q ss_pred             eeecccCCCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCc
Q 040569          149 RRARVNEDDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGY  227 (385)
Q Consensus       149 ~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  227 (385)
                      +.....   ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...   .... .     ....++..
T Consensus       198 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~---~~~~-~-----~~~~~~~~  265 (320)
T 3a99_A          198 ALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---EEII-R-----GQVFFRQR  265 (320)
T ss_dssp             EECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH---HHHH-H-----CCCCCSSC
T ss_pred             cccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh---hhhh-c-----cccccccc
Confidence            876422   2234579999999999987665 67899999999999999999999642   1111 1     12234556


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          228 MSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       228 ~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +++++.+||.+||+.||.+|||+.|+++||||+..
T Consensus       266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence            89999999999999999999999999999999865


No 183
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=4.9e-47  Score=355.92  Aligned_cols=246  Identities=22%  Similarity=0.261  Sum_probs=200.7

Q ss_pred             CceeeceeeccCceEEEEEEECC---CCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNR---SSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~---~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|++..   ++..+|+|.+....    .+.+.+|+.++++++||||+++++++... .    .
T Consensus        13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~----~   87 (281)
T 3cc6_A           13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-P----T   87 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-S----C
T ss_pred             ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-C----C
Confidence            58999999999999999998653   34569999987542    45678999999999999999999986432 2    3


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++++|.+++.. +..+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++.....
T Consensus        88 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A           88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC--VKLGDFGLSRYIED  165 (281)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTE--EEECCCCGGGCC--
T ss_pred             EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCc--EEeCccCCCccccc
Confidence            589999999999999974 556999999999999999999999999999999999999987765  99999999987643


Q ss_pred             cCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHH
Q 040569          154 NEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQA  232 (385)
Q Consensus       154 ~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  232 (385)
                      ..........||+.|+|||++.+..++.++|||||||++|+|++ |+.||....... ....+.. ...+..+..+++.+
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~l  243 (281)
T 3cc6_A          166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-VIGVLEK-GDRLPKPDLCPPVL  243 (281)
T ss_dssp             -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG-HHHHHHH-TCCCCCCTTCCHHH
T ss_pred             ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH-HHHHHhc-CCCCCCCCCCCHHH
Confidence            33333344567889999999998899999999999999999998 999997643322 2222211 22334566689999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          233 QDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       233 ~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      .+||.+||..||.+|||+.|++++
T Consensus       244 ~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          244 YTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCCchhCcCHHHHHHH
Confidence            999999999999999999999875


No 184
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=4e-47  Score=355.94  Aligned_cols=247  Identities=24%  Similarity=0.325  Sum_probs=208.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeeeeeeeeeecc------------C
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQIVAYKGCDISEE------------N   69 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------------~   69 (385)
                      +|++.+.||+|+||+||+|+++.+++.||+|.+.... +.+.+|++++++++||||+++++++....            .
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS   90 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred             ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence            5899999999999999999999999999999987653 46778999999999999999999875421            1


Q ss_pred             CeEEEEEEEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCc
Q 040569           70 GKILYNLFLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGC  147 (385)
Q Consensus        70 ~~~~~~lv~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~  147 (385)
                      ....+++||||+++|+|.+++..  +..+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~  168 (284)
T 2a19_B           91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ--VKIGDFGL  168 (284)
T ss_dssp             EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCCTT
T ss_pred             CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCC--EEECcchh
Confidence            23346799999999999999973  457999999999999999999999999999999999999997766  99999999


Q ss_pred             eeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCc
Q 040569          148 ARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGY  227 (385)
Q Consensus       148 a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  227 (385)
                      +.......  ......||+.|+|||++.+..++.++|||||||++|+|++|..|+...   ......+..    ..++..
T Consensus       169 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~~~~~----~~~~~~  239 (284)
T 2a19_B          169 VTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---SKFFTDLRD----GIISDI  239 (284)
T ss_dssp             CEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---HHHHHHHHT----TCCCTT
T ss_pred             heeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---HHHHHHhhc----cccccc
Confidence            98764322  233457999999999999999999999999999999999999988432   112222211    223456


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccc
Q 040569          228 MSKQAQDFLSKCLIRNPGERWSASELLEHGFVK  260 (385)
Q Consensus       228 ~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~  260 (385)
                      +++.+++||.+||..||.+|||+.|+++|++..
T Consensus       240 ~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          240 FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            889999999999999999999999999998754


No 185
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=1e-46  Score=350.37  Aligned_cols=241  Identities=17%  Similarity=0.294  Sum_probs=204.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++.+.||+|+||+||+|+++  ++.+|||.+....     .+.+.+|+.++++++||||+++++++.......  +++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--~~l   86 (271)
T 3kmu_A           11 QLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH--PTL   86 (271)
T ss_dssp             GCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS--CEE
T ss_pred             HhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC--eEe
Confidence            5899999999999999999986  8899999987543     346789999999999999999999876653332  568


Q ss_pred             EEeecCCCCHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           77 FLEYAPGGTLTDAIRSGT--CLEEGRIRSHTRAVLLGLQYLHSNG--IVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~--~l~e~~~~~i~~qil~gL~yLH~~g--ivHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      ||||++||+|.+++....  .+++..+..++.||+.||+|||++|  ++||||||+|||++.++.  ++|+|||++... 
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~--~~l~~~~~~~~~-  163 (271)
T 3kmu_A           87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT--ARISMADVKFSF-  163 (271)
T ss_dssp             EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSC--EEEEGGGSCCTT-
T ss_pred             eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcc--eeEEeccceeee-
Confidence            999999999999998654  4899999999999999999999999  999999999999987765  899988886543 


Q ss_pred             ccCCCCCCccccCCcccChhhhcCCCCCC---CCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCC
Q 040569          153 VNEDDEGKPICGTPICMAPEVARGEEQGF---PADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMS  229 (385)
Q Consensus       153 ~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s  229 (385)
                           ......||+.|+|||++.+..++.   ++|||||||++|+|++|+.||.... .......+......+.++..++
T Consensus       164 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 3kmu_A          164 -----QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-NMEIGMKVALEGLRPTIPPGIS  237 (271)
T ss_dssp             -----SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-HHHHHHHHHHSCCCCCCCTTCC
T ss_pred             -----cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-hHHHHHHHHhcCCCCCCCCCCC
Confidence                 123347899999999998876655   7999999999999999999998754 3333334434455667788899


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          230 KQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      +++.+||.+||+.||.+|||+.|+++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          238 PHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999986


No 186
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=7.8e-47  Score=363.21  Aligned_cols=246  Identities=21%  Similarity=0.318  Sum_probs=199.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEE----EEEeccC----CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVF----AVKSAEL----SNSEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~----AvK~~~~----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|++..+++.+    |+|.+..    ...+.+.+|+.++++++||||+++++++....     
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----   90 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-----   90 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-----
T ss_pred             HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----
Confidence            5899999999999999999998887765    7777643    23467889999999999999999999876532     


Q ss_pred             EEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           74 YNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      .++++||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~--~kl~Dfg~a~~~~  168 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLG  168 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE--EEECCTTHHHHHT
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCC--EEEccCcceeEcc
Confidence            4589999999999999984 567999999999999999999999999999999999999988766  9999999998764


Q ss_pred             ccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          153 VNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       153 ~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      ..... ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||...... .....+. .......+..++.
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~-~~~~~~~~~~~~~  246 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILE-KGERLPQPPICTI  246 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHH-TTCCCCCCTTBCH
T ss_pred             CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-HHHHHHH-cCCCCCCCccCCH
Confidence            32221 2233457889999999999999999999999999999999 99999865332 2222222 2333445666899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ++.+|+.+||+.||.+|||+.|++++
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          247 DVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999999999976


No 187
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=1.2e-46  Score=356.41  Aligned_cols=250  Identities=23%  Similarity=0.325  Sum_probs=205.1

Q ss_pred             CceeeceeeccCceEEEEEE----ECCCCcEEEEEeccCC----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGM----SNRSSEVFAVKSAELS----NSEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~----~~~~~~~~AvK~~~~~----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      .|++++.||+|+||+||+|+    +..+++.||+|.+...    ..+.+.+|+++|++++||||+++++++.......  
T Consensus        22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--   99 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG--   99 (302)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC--
T ss_pred             hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce--
Confidence            48899999999999999999    6778999999998643    3467889999999999999999999887653322  


Q ss_pred             EEEEEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           74 YNLFLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      +++||||+++|+|.+++. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++....
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ--VKIGDFGLTKAIE  177 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCCTTCEECC
T ss_pred             EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCC--EEECccccccccc
Confidence            568999999999999995 5567999999999999999999999999999999999999988766  9999999998764


Q ss_pred             ccCC--CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-------------ChHHHHHHhcC
Q 040569          153 VNED--DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA-------------DPISALHRIGF  217 (385)
Q Consensus       153 ~~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-------------~~~~~~~~~~~  217 (385)
                      ....  .......||+.|+|||++.+..++.++|||||||++|+|++|..|+....             .....+.....
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (302)
T 4e5w_A          178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK  257 (302)
T ss_dssp             TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred             CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence            3322  12334568889999999999999999999999999999999999864210             11111112122


Q ss_pred             CCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          218 SSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       218 ~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .......+..+++++.+||.+||+.||.+|||+.++++
T Consensus       258 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          258 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            33344566779999999999999999999999999986


No 188
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.4e-47  Score=363.30  Aligned_cols=244  Identities=27%  Similarity=0.380  Sum_probs=202.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---------HHHHHHHHHHHHhc----CCCCeeeeeeeeeecc
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---------SEFLQREQRILSAL----ACPQIVAYKGCDISEE   68 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---------~~~~~~E~~il~~l----~hpnIv~~~~~~~~~~   68 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+....         ...+.+|+.+++++    .||||+++++++....
T Consensus        32 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~  111 (312)
T 2iwi_A           32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE  111 (312)
T ss_dssp             -CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred             ceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC
Confidence            5999999999999999999999999999999986542         12345799999999    8999999999876554


Q ss_pred             CCeEEEEEEEee-cCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee-cCCCCCeEEeecC
Q 040569           69 NGKILYNLFLEY-APGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS-KDNEQGAKIADFG  146 (385)
Q Consensus        69 ~~~~~~~lv~Ey-~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~-~~~~~~~kL~DFG  146 (385)
                      .    +++|+|| +.+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.  +||+|||
T Consensus       112 ~----~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~--~kl~dfg  185 (312)
T 2iwi_A          112 G----FMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC--AKLIDFG  185 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTE--EEECCCS
T ss_pred             e----EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCe--EEEEEcc
Confidence            3    5689999 78999999999777899999999999999999999999999999999999998 4544  9999999


Q ss_pred             ceeeecccCCCCCCccccCCcccChhhhcCCCC-CCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCC
Q 040569          147 CARRARVNEDDEGKPICGTPICMAPEVARGEEQ-GFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIP  225 (385)
Q Consensus       147 ~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  225 (385)
                      ++......   ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...   .... .     ....++
T Consensus       186 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~---~~~~-~-----~~~~~~  253 (312)
T 2iwi_A          186 SGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD---QEIL-E-----AELHFP  253 (312)
T ss_dssp             SCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH---HHHH-H-----TCCCCC
T ss_pred             hhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh---HHHh-h-----hccCCc
Confidence            99876432   2334569999999999987666 45899999999999999999999642   1111 1     123355


Q ss_pred             CcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          226 GYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       226 ~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      ..+++++++||.+||+.||.+|||+.|+++||||+...
T Consensus       254 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          254 AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            67899999999999999999999999999999998653


No 189
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.9e-47  Score=380.61  Aligned_cols=256  Identities=22%  Similarity=0.294  Sum_probs=197.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|...+.||+|+||+|+. ....+++.||||++.......+.+|+++|+++ +||||+++++++.....    +++||||
T Consensus        25 ~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~----~~lv~E~   99 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQF----QYIAIEL   99 (432)
T ss_dssp             EEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTE----EEEEEEC
T ss_pred             EEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCE----EEEEEEC
Confidence            488899999999998763 34467999999999766656677999999999 89999999988765432    6799999


Q ss_pred             cCCCCHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeec---CCCCCeEEeecCceeeecccCC
Q 040569           81 APGGTLTDAIRSG-TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSK---DNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        81 ~~ggsL~~~l~~~-~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~---~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      |. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.   ++...+||+|||+++.......
T Consensus       100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence            96 5999999844 35667778899999999999999999999999999999954   3333478999999987643321


Q ss_pred             --CCCCccccCCcccChhhhc---CCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          157 --DEGKPICGTPICMAPEVAR---GEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       157 --~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                        ......+||+.|+|||++.   +..++.++|||||||++|+|++ |..||......................+...+.
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDV  258 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHH
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccH
Confidence              2234567999999999997   4567789999999999999999 999997643333322221111222222334566


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      .+++||.+||+.||.+|||+.|+|+||||....
T Consensus       259 ~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~~  291 (432)
T 3p23_A          259 IARELIEKMIAMDPQKRPSAKHVLKHPFFWSLE  291 (432)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCHH
T ss_pred             HHHHHHHHHHhCCHhhCCCHHHHHhCccccChH
Confidence            789999999999999999999999999997643


No 190
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=5e-47  Score=360.45  Aligned_cols=248  Identities=24%  Similarity=0.304  Sum_probs=207.1

Q ss_pred             CceeeceeeccCceEEEEEEE-----CCCCcEEEEEeccCCC----HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMS-----NRSSEVFAVKSAELSN----SEFLQREQRILSAL-ACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++++.||+|+||+||+|.+     ..+++.+|+|.+....    .+.+.+|+.+|+++ +||||+++++++.....  
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--  101 (313)
T 1t46_A           24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP--  101 (313)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred             hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC--
Confidence            588999999999999999985     4578899999987543    35678999999999 99999999998866544  


Q ss_pred             EEEEEEEeecCCCCHHHHHHcCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSGT------------------CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS  133 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~~------------------~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~  133 (385)
                        +++||||+++|+|.+++....                  .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus       102 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  179 (313)
T 1t46_A          102 --TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT  179 (313)
T ss_dssp             --CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred             --cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEc
Confidence              568999999999999998543                  489999999999999999999999999999999999998


Q ss_pred             cCCCCCeEEeecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHH
Q 040569          134 KDNEQGAKIADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISA  211 (385)
Q Consensus       134 ~~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~  211 (385)
                      .++.  +||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||.........
T Consensus       180 ~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  257 (313)
T 1t46_A          180 HGRI--TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (313)
T ss_dssp             TTTE--EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             CCCC--EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence            7765  999999999876433221 1234467889999999999999999999999999999999 99999875443333


Q ss_pred             HHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          212 LHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       212 ~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ...+ .....+..+..+++++.+||.+||+.||.+|||+.|++++
T Consensus       258 ~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          258 YKMI-KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHH-HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHh-ccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            2222 1222344456789999999999999999999999999975


No 191
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=6.5e-47  Score=362.92  Aligned_cols=251  Identities=27%  Similarity=0.410  Sum_probs=184.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHH-HHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQR-ILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~-il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|.++.+++.||||.+....    ...+.+|.. +++.+.||||+++++++.....    +++
T Consensus        23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~----~~l   98 (327)
T 3aln_A           23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD----CWI   98 (327)
T ss_dssp             SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE----EEE
T ss_pred             HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc----eEE
Confidence            5889999999999999999999999999999986542    123445555 6777899999999998876442    669


Q ss_pred             EEeecCCCCHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCEEeecCCCCCeEEeecCceee
Q 040569           77 FLEYAPGGTLTDAIRS-----GTCLEEGRIRSHTRAVLLGLQYLHSN-GIVHCDIKGQNILVSKDNEQGAKIADFGCARR  150 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~-----~~~l~e~~~~~i~~qil~gL~yLH~~-givHrDlKp~NILi~~~~~~~~kL~DFG~a~~  150 (385)
                      ||||+++ +|.+++..     ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++.  +||+|||+++.
T Consensus        99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~~~~  175 (327)
T 3aln_A           99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN--IKLCDFGISGQ  175 (327)
T ss_dssp             EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTE--EEECCCSSSCC
T ss_pred             EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCC--EEEccCCCcee
Confidence            9999986 88888762     56799999999999999999999999 9999999999999987766  99999999987


Q ss_pred             ecccCCCCCCccccCCcccChhhh----cCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCC--
Q 040569          151 ARVNEDDEGKPICGTPICMAPEVA----RGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEI--  224 (385)
Q Consensus       151 ~~~~~~~~~~~~~Gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--  224 (385)
                      .....  ......||+.|+|||++    .+..++.++|||||||++|+|++|+.||.........+..+ .....+.+  
T Consensus       176 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~  252 (327)
T 3aln_A          176 LVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV-VKGDPPQLSN  252 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC-CCSCCCCCCC
T ss_pred             ccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH-hcCCCCCCCC
Confidence            63221  22334799999999999    45678999999999999999999999998654333333222 12222222  


Q ss_pred             --CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          225 --PGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       225 --~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                        ...+++++.+||.+||..||.+|||+.|+++||||...
T Consensus       253 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence              23589999999999999999999999999999999754


No 192
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=7.2e-47  Score=368.74  Aligned_cols=253  Identities=19%  Similarity=0.258  Sum_probs=200.7

Q ss_pred             CceeeceeeccCceEEEEEEECCC-----CcEEEEEeccCCCHH--------------HHHHHHHHHHhcCCCCeeeeee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS-----SEVFAVKSAELSNSE--------------FLQREQRILSALACPQIVAYKG   62 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~~AvK~~~~~~~~--------------~~~~E~~il~~l~hpnIv~~~~   62 (385)
                      +|++++.||+|+||+||+|.++.+     ++.||||.+......              ...+|+..++.+.||||+++++
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~  115 (364)
T 3op5_A           36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG  115 (364)
T ss_dssp             EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred             eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence            589999999999999999999765     588999998765421              1223455566778999999999


Q ss_pred             eeeeccCCeEEEEEEEeecCCCCHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeE
Q 040569           63 CDISEENGKILYNLFLEYAPGGTLTDAIRSG-TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAK  141 (385)
Q Consensus        63 ~~~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~-~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~k  141 (385)
                      ++.....+..+.++||||+ |++|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.+....+|
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~k  194 (364)
T 3op5_A          116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY  194 (364)
T ss_dssp             EEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEE
T ss_pred             eeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEE
Confidence            9888766666788999999 99999999854 679999999999999999999999999999999999999843344599


Q ss_pred             EeecCceeeecccCCC------CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHH--
Q 040569          142 IADFGCARRARVNEDD------EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALH--  213 (385)
Q Consensus       142 L~DFG~a~~~~~~~~~------~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~--  213 (385)
                      |+|||+++........      .....+||+.|||||++.+..++.++|||||||++|+|++|+.||...........  
T Consensus       195 l~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~  274 (364)
T 3op5_A          195 LVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDS  274 (364)
T ss_dssp             ECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHH
T ss_pred             EEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHH
Confidence            9999999876433221      12345699999999999999999999999999999999999999985322222111  


Q ss_pred             HhcCCCCCCC------CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          214 RIGFSSDTPE------IPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       214 ~~~~~~~~~~------~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ........+.      .+..+++++.+|+.+||..||.+||++.++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          275 KIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            1111011000      12457899999999999999999999999986


No 193
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=9.7e-47  Score=383.03  Aligned_cols=246  Identities=22%  Similarity=0.331  Sum_probs=209.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|+++.++..||||.+...  ..+.+.+|+.+|++++||||+++++++.....    +++|||
T Consensus       221 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----~~lv~E  296 (495)
T 1opk_A          221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP----FYIITE  296 (495)
T ss_dssp             GEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----CEEEEE
T ss_pred             HceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCc----EEEEEE
Confidence            478899999999999999999999999999998754  46788899999999999999999999866544    669999


Q ss_pred             ecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           80 YAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        80 y~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |+++|+|.++++.  ...+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus       297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~~  374 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDTYT  374 (495)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC--EEECCTTCEECCTTCCEE
T ss_pred             ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCc--EEEeecccceeccCCcee
Confidence            9999999999984  345899999999999999999999999999999999999987765  999999999876433222


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFL  236 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  236 (385)
                      ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+. .......+..+++++.+||
T Consensus       375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~li  452 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLE-KDYRMERPEGCPEKVYELM  452 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred             ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH-cCCCCCCCCCCCHHHHHHH
Confidence            2334456789999999999999999999999999999999 99999875432 2222222 2334455677899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHh
Q 040569          237 SKCLIRNPGERWSASELLE  255 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~  255 (385)
                      .+||+.||.+|||+.++++
T Consensus       453 ~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          453 RACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCcChhHCcCHHHHHH
Confidence            9999999999999999986


No 194
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=3.2e-47  Score=363.01  Aligned_cols=250  Identities=23%  Similarity=0.302  Sum_probs=202.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|++.+.||+|+||+||+|.++.+++.||||.+....   .+.+.+|+.++++++||||+++++++.........+++||
T Consensus        30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  109 (317)
T 2buj_A           30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL  109 (317)
T ss_dssp             EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence            4899999999999999999999999999999886543   3567899999999999999999999876554455577999


Q ss_pred             eecCCCCHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           79 EYAPGGTLTDAIRS----GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        79 Ey~~ggsL~~~l~~----~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ||+++|+|.+++..    +..+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++......
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~--~kl~dfg~~~~~~~~  187 (317)
T 2buj_A          110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQ--PVLMDLGSMNQACIH  187 (317)
T ss_dssp             ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC--EEECCCSSCEESCEE
T ss_pred             EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCC--EEEEecCcchhcccc
Confidence            99999999999974    567999999999999999999999999999999999999987766  999999998765321


Q ss_pred             CCC--------CCCccccCCcccChhhhcCCC---CCCCCChHHHHHHHHHHHhCCCCCCCC---CChHHHHHHhcCCCC
Q 040569          155 EDD--------EGKPICGTPICMAPEVARGEE---QGFPADVWALGCTVLEMATGRPPWPDV---ADPISALHRIGFSSD  220 (385)
Q Consensus       155 ~~~--------~~~~~~Gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltG~~Pf~~~---~~~~~~~~~~~~~~~  220 (385)
                      ...        ......||+.|+|||++.+..   ++.++|||||||++|+|++|+.||...   .........  . ..
T Consensus       188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--~-~~  264 (317)
T 2buj_A          188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ--N-QL  264 (317)
T ss_dssp             EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH--C-C-
T ss_pred             cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh--c-cC
Confidence            111        012335799999999997654   688999999999999999999999531   111111111  1 11


Q ss_pred             CCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          221 TPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       221 ~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ....+..+++++.+||.+||+.||.+|||+.+++++
T Consensus       265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            122234579999999999999999999999999986


No 195
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=2.6e-46  Score=356.43  Aligned_cols=242  Identities=25%  Similarity=0.398  Sum_probs=198.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++.+.||+|+||+||+|.++  ++.+|+|.+.... .+.+.+|+++|++++||||+++++++..  .    .++||||
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~----~~lv~e~   80 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--P----VCLVMEY   80 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--T----TEEEEEC
T ss_pred             HeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--C----cEEEEEc
Confidence            5889999999999999999985  7899999987544 4678899999999999999999997652  2    4589999


Q ss_pred             cCCCCHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           81 APGGTLTDAIRSGT---CLEEGRIRSHTRAVLLGLQYLHS---NGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        81 ~~ggsL~~~l~~~~---~l~e~~~~~i~~qil~gL~yLH~---~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||+|.+++....   .+++..+..++.||++||+|||+   +||+||||||+|||++.++. .+||+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~-~~kl~Dfg~~~~~~~~  159 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT-VLKICDFGTACDIQTH  159 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT-EEEECCCCC-------
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC-EEEEcccccccccccc
Confidence            99999999998654   37899999999999999999999   89999999999999986543 2699999999765322


Q ss_pred             CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHH
Q 040569          155 EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQD  234 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (385)
                          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...................+..+..+++.+.+
T Consensus       160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (307)
T 2eva_A          160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES  235 (307)
T ss_dssp             ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHH
T ss_pred             ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHH
Confidence                2334699999999999999999999999999999999999999986544333222222234455566778999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHhC
Q 040569          235 FLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       235 ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ||.+||+.||.+|||+.+++++
T Consensus       236 li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          236 LMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCChhhCcCHHHHHHH
Confidence            9999999999999999999874


No 196
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=2.2e-46  Score=352.90  Aligned_cols=248  Identities=21%  Similarity=0.273  Sum_probs=200.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+... ..+.+.+|+.+++.+.|++++..+..+.....   ..++||||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~lv~e~   86 (296)
T 4hgt_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMEL   86 (296)
T ss_dssp             -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEEEEEC
T ss_pred             ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCC---ceEEEEEc
Confidence            599999999999999999999999999999986543 23467889999999999888877766544333   25699999


Q ss_pred             cCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEe---ecCCCCCeEEeecCceeeecccCC
Q 040569           81 APGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILV---SKDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        81 ~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi---~~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      + +++|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.  +||+|||+++.......
T Consensus        87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~--~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL--VYIIDFGLAKKYRDART  163 (296)
T ss_dssp             C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTC--EEECCCTTCEECBCTTT
T ss_pred             c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCe--EEEecCccceeccCccc
Confidence            9 899999998 45679999999999999999999999999999999999999   45444  99999999987654322


Q ss_pred             ------CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHHhcCCCCCCCCC
Q 040569          157 ------DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD-----PISALHRIGFSSDTPEIP  225 (385)
Q Consensus       157 ------~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~  225 (385)
                            .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....     ..............+...
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC  243 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhh
Confidence                  122356799999999999999999999999999999999999999975422     111111111112222233


Q ss_pred             CcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          226 GYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       226 ~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ..+|+++.+||.+||+.||.+|||+.++++
T Consensus       244 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            457899999999999999999999999987


No 197
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=2e-47  Score=366.15  Aligned_cols=250  Identities=22%  Similarity=0.290  Sum_probs=201.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH----HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS----EFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~----~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++.+.||+|+||+||+|+++ +++.||||.+.....    ..+.+|++++++++||||+++++++.....    .++|
T Consensus        31 ~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~lv  105 (326)
T 3uim_A           31 NFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE----RLLV  105 (326)
T ss_dssp             SSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSC----CEEE
T ss_pred             ccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCc----eEEE
Confidence            5899999999999999999854 689999999875432    267899999999999999999998876544    5689


Q ss_pred             EeecCCCCHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCCEEeecCCCCCeEEeecCceee
Q 040569           78 LEYAPGGTLTDAIRSG----TCLEEGRIRSHTRAVLLGLQYLHSN---GIVHCDIKGQNILVSKDNEQGAKIADFGCARR  150 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~----~~l~e~~~~~i~~qil~gL~yLH~~---givHrDlKp~NILi~~~~~~~~kL~DFG~a~~  150 (385)
                      |||+++|+|.+++...    ..+++..+..++.||+.||+|||++   ||+||||||+|||++.++.  +||+|||+++.
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~--~kl~Dfg~~~~  183 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE--AVVGDFGLAKL  183 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC--EEECCCSSCEE
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC--EEeccCccccc
Confidence            9999999999999843    2489999999999999999999999   9999999999999987765  99999999987


Q ss_pred             ecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCC-----CC--hHHHHHHhcCCC----
Q 040569          151 ARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDV-----AD--PISALHRIGFSS----  219 (385)
Q Consensus       151 ~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~-----~~--~~~~~~~~~~~~----  219 (385)
                      .............||+.|+|||++.+..++.++|||||||++|+|++|+.||...     .+  ............    
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (326)
T 3uim_A          184 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA  263 (326)
T ss_dssp             CCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTT
T ss_pred             cCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhh
Confidence            6544433344556999999999999889999999999999999999999999511     11  111111110000    


Q ss_pred             -----CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcc
Q 040569          220 -----DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGF  258 (385)
Q Consensus       220 -----~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~  258 (385)
                           ..+..+...++.+.+|+.+||+.||.+|||+.|+++|..
T Consensus       264 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          264 LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             SSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             hcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence                 011122233578999999999999999999999999754


No 198
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=3.1e-46  Score=352.25  Aligned_cols=248  Identities=21%  Similarity=0.274  Sum_probs=202.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++++.||+|+||+||+|++..+++.||||.+... ..+.+.+|+.+++.+.|++++..+..+.....   ..++||||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~lv~e~   86 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMEL   86 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEEEEEC
T ss_pred             EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCC---ceEEEEEe
Confidence            699999999999999999999999999999987643 34568899999999999887777665544332   25699999


Q ss_pred             cCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee---cCCCCCeEEeecCceeeecccCC
Q 040569           81 APGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS---KDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        81 ~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~---~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      + +++|.+++. ....+++..+..++.||+.||+|||++||+||||||+|||++   .++.  +||+|||+++.......
T Consensus        87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~--~kl~Dfg~~~~~~~~~~  163 (296)
T 3uzp_A           87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL--VYIIDFGLAKKYRDART  163 (296)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTC--EEECCCTTCEECBCTTT
T ss_pred             c-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCe--EEEeeCCCccccccccc
Confidence            9 899999998 456799999999999999999999999999999999999994   4443  99999999987654322


Q ss_pred             C------CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHHhcCCCCCCCCC
Q 040569          157 D------EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD-----PISALHRIGFSSDTPEIP  225 (385)
Q Consensus       157 ~------~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~  225 (385)
                      .      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....     ....+.........+..+
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (296)
T 3uzp_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC  243 (296)
T ss_dssp             CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred             ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHH
Confidence            1      12456799999999999999999999999999999999999999975422     122221111112222233


Q ss_pred             CcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          226 GYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       226 ~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ..+|+++.+||.+||+.||.+|||+.++++
T Consensus       244 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            558899999999999999999999999986


No 199
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2.4e-46  Score=353.24  Aligned_cols=245  Identities=22%  Similarity=0.307  Sum_probs=203.5

Q ss_pred             Cceeec-eeeccCceEEEEEE--ECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQ-TIGRGSTATVSIGM--SNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~-~LG~G~~g~Vy~a~--~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+ .||+|+||+||+|.  .+.+++.+|||.+....     .+.+.+|++++++++||||+++++++. ...    
T Consensus        17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~----   91 (291)
T 1xbb_A           17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AES----   91 (291)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSS----
T ss_pred             hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-CCC----
Confidence            477777 99999999999994  46678999999986532     356889999999999999999999872 222    


Q ss_pred             EEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           74 YNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      +++||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++.....
T Consensus        92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~  169 (291)
T 1xbb_A           92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY--AKISDFGLSKALRA  169 (291)
T ss_dssp             EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCCTTCEECCT
T ss_pred             cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCc--EEEccCCcceeecc
Confidence            5699999999999999998888999999999999999999999999999999999999997765  99999999987643


Q ss_pred             cCCC--CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          154 NEDD--EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       154 ~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      ....  ......|++.|+|||++.+..++.++|||||||++|+|++ |+.||.... .......+ .....+..+..+++
T Consensus       170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~-~~~~~~~~~~~~~~  247 (291)
T 1xbb_A          170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAML-EKGERMGCPAGCPR  247 (291)
T ss_dssp             TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHH-HTTCCCCCCTTCCH
T ss_pred             CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHH-HcCCCCCCCCCCCH
Confidence            2221  1222346789999999998889999999999999999999 999998753 33333333 23344566778999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ++.+||.+||+.||.+|||+.++++
T Consensus       248 ~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          248 EMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999999986


No 200
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=5.9e-47  Score=360.44  Aligned_cols=249  Identities=25%  Similarity=0.348  Sum_probs=207.2

Q ss_pred             CceeeceeeccCceEEEEEEE-----CCCCcEEEEEeccCCC----HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMS-----NRSSEVFAVKSAELSN----SEFLQREQRILSAL-ACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++++.||+|+||+||+|.+     ..+++.||||.+....    ...+.+|+.+++++ +||||+++++++.....  
T Consensus        28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--  105 (316)
T 2xir_A           28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG--  105 (316)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS--
T ss_pred             heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC--
Confidence            588999999999999999985     4577999999987543    24577999999999 79999999998765432  


Q ss_pred             EEEEEEEeecCCCCHHHHHHcCCC----------------CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecC
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSGTC----------------LEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKD  135 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~~~----------------l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~  135 (385)
                       .+++||||++||+|.+++.....                +++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus       106 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~  184 (316)
T 2xir_A          106 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  184 (316)
T ss_dssp             -CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             -ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC
Confidence             15689999999999999985443                8999999999999999999999999999999999999877


Q ss_pred             CCCCeEEeecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHH
Q 040569          136 NEQGAKIADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALH  213 (385)
Q Consensus       136 ~~~~~kL~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~  213 (385)
                      +.  +||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||...........
T Consensus       185 ~~--~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~  262 (316)
T 2xir_A          185 NV--VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  262 (316)
T ss_dssp             GC--EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred             CC--EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHH
Confidence            66  999999999865322211 1234568899999999999999999999999999999998 9999987654443333


Q ss_pred             HhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          214 RIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       214 ~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      .+. .......+..+++++.++|.+||+.||.+|||+.|+++|
T Consensus       263 ~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          263 RLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             Hhc-cCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            332 223345566789999999999999999999999999986


No 201
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=3.5e-47  Score=357.85  Aligned_cols=243  Identities=17%  Similarity=0.302  Sum_probs=200.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCC-------cEEEEEeccCC---CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSS-------EVFAVKSAELS---NSEFLQREQRILSALACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~-------~~~AvK~~~~~---~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++.+.||+|+||+||+|+++.++       ..+|+|.+...   ..+.+.+|+.++++++||||+++++++.....  
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--   86 (289)
T 4fvq_A            9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE--   86 (289)
T ss_dssp             GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC--
T ss_pred             HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC--
Confidence            5899999999999999999998877       46999988643   34678899999999999999999999876544  


Q ss_pred             EEEEEEEeecCCCCHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCC------CeEEee
Q 040569           72 ILYNLFLEYAPGGTLTDAIRSGT-CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQ------GAKIAD  144 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~~~-~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~------~~kL~D  144 (385)
                        .++||||++||+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++..      .+||+|
T Consensus        87 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           87 --NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             --CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             --CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence              568999999999999998554 49999999999999999999999999999999999999876532      189999


Q ss_pred             cCceeeecccCCCCCCccccCCcccChhhhcC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCC
Q 040569          145 FGCARRARVNEDDEGKPICGTPICMAPEVARG-EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPE  223 (385)
Q Consensus       145 FG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~  223 (385)
                      ||++....     ......||+.|+|||++.+ ..++.++|||||||++|+|++|..|+....+.........   ..+.
T Consensus       165 fg~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~---~~~~  236 (289)
T 4fvq_A          165 PGISITVL-----PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE---DRHQ  236 (289)
T ss_dssp             CCSCTTTS-----CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH---TTCC
T ss_pred             Cccccccc-----CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh---ccCC
Confidence            99986542     1223468999999999988 6789999999999999999995544433334433333322   2334


Q ss_pred             CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          224 IPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       224 ~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ++...++++.+||.+||++||.+|||+.|+++|
T Consensus       237 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          237 LPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            455578899999999999999999999999985


No 202
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=2.1e-46  Score=356.95  Aligned_cols=251  Identities=27%  Similarity=0.422  Sum_probs=190.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCH-----HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNS-----EFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~-----~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.+++.||||.+.....     +.+.++..+++.+.||||+++++++.....    +++
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~----~~l  101 (318)
T 2dyl_A           26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD----VFI  101 (318)
T ss_dssp             GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE----EEE
T ss_pred             cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCc----EEE
Confidence            58889999999999999999999999999999865432     234455567888899999999998866442    679


Q ss_pred             EEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           77 FLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSN-GIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~-givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ||||+ ++.+..+.. ..+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.  +||+|||++......
T Consensus       102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ--IKLCDFGISGRLVDD  178 (318)
T ss_dssp             EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSC--EEECCCTTC------
T ss_pred             EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCC--EEEEECCCchhccCC
Confidence            99999 556666665 366799999999999999999999995 9999999999999987766  999999999765332


Q ss_pred             CCCCCCccccCCcccChhhhc-----CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCC--Cc
Q 040569          155 EDDEGKPICGTPICMAPEVAR-----GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIP--GY  227 (385)
Q Consensus       155 ~~~~~~~~~Gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~  227 (385)
                      .  ......||+.|+|||++.     +..++.++|||||||++|+|++|+.||.........+..+.. ...+.++  ..
T Consensus       179 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~  255 (318)
T 2dyl_A          179 K--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ-EEPPLLPGHMG  255 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH-SCCCCCCSSSC
T ss_pred             c--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc-cCCCCCCccCC
Confidence            2  233457999999999994     456788999999999999999999999875555554444322 2222222  35


Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          228 MSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       228 ~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      +++++.+||.+||+.||.+|||+.|+++||||+..
T Consensus       256 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence            79999999999999999999999999999999754


No 203
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.5e-46  Score=350.47  Aligned_cols=244  Identities=23%  Similarity=0.329  Sum_probs=205.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++++.||+|+||+||+|.++ ++..+|+|.+...  ..+.+.+|+++|++++||||+++++++... .    .++|||
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~----~~~v~e   87 (279)
T 1qpc_A           14 TLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-P----IYIITE   87 (279)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S----CEEEEE
T ss_pred             hhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCC-C----cEEEEe
Confidence            4888999999999999999976 5678999988654  467888999999999999999999986432 2    558999


Q ss_pred             ecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           80 YAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        80 y~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |++|++|.+++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++.........
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC--EEECCCTTCEECSSSCEE
T ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCC--EEECCCcccccccCcccc
Confidence            99999999999743  26999999999999999999999999999999999999987665  999999999876433322


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFL  236 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  236 (385)
                      ......|++.|+|||++.+..++.++|||||||++|+|++ |+.||.... .......+. ....+..+..+++++.+||
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li  243 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNLE-RGYRMVRPDNCPEELYQLM  243 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred             cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-HHHHHHHHh-cccCCCCcccccHHHHHHH
Confidence            3334467889999999998889999999999999999999 999998753 333333332 2233455667899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHh
Q 040569          237 SKCLIRNPGERWSASELLE  255 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~  255 (385)
                      .+||..||.+|||+.++++
T Consensus       244 ~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          244 RLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhccChhhCCCHHHHHH
Confidence            9999999999999999986


No 204
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=4.3e-46  Score=354.34  Aligned_cols=248  Identities=23%  Similarity=0.378  Sum_probs=195.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC---C---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---N---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|.+..+++.+|+|.+...   .   .+.+.+|+.++++++||||+++++++.....    ++
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~  108 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE----LN  108 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE----EE
T ss_pred             ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCc----EE
Confidence            589999999999999999999999999999988642   1   3467799999999999999999998876543    67


Q ss_pred             EEEeecCCCCHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           76 LFLEYAPGGTLTDAIRS----GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~----~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      +||||+++++|.+++..    ...+++..+..++.||+.||.|||++|++||||||+|||++.++.  +||+|||++...
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~--~kl~Dfg~~~~~  186 (310)
T 2wqm_A          109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFF  186 (310)
T ss_dssp             EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC--EEECCC------
T ss_pred             EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCC--EEEEeccceeee
Confidence            99999999999999863    566999999999999999999999999999999999999987765  999999999865


Q ss_pred             cccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA-DPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      .... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... +.......+......+..+..+++
T Consensus       187 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (310)
T 2wqm_A          187 SSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE  265 (310)
T ss_dssp             -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH
T ss_pred             cCCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCH
Confidence            4322 12234579999999999999999999999999999999999999997543 223333333322222333456899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ++.+||.+||..||.+|||+.+++++
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999999999973


No 205
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=9.8e-47  Score=361.94  Aligned_cols=251  Identities=26%  Similarity=0.364  Sum_probs=208.6

Q ss_pred             CceeeceeeccCceEEEEEE----ECCCCcEEEEEeccCCCH---HHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGM----SNRSSEVFAVKSAELSNS---EFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~----~~~~~~~~AvK~~~~~~~---~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+    +..+++.||||.+.....   +.+.+|+++|++++||||+++++++.......  +
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--~  101 (327)
T 3lxl_A           24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS--L  101 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE--E
T ss_pred             hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce--E
Confidence            58999999999999999999    577899999999976553   45789999999999999999999877544433  5


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||++|++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH--VKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE--EEECCGGGCEECCT
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCC--EEEcccccceeccc
Confidence            699999999999999984 456999999999999999999999999999999999999988766  99999999987643


Q ss_pred             cCCC--CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-------------hHHHHHHhcCC
Q 040569          154 NEDD--EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD-------------PISALHRIGFS  218 (385)
Q Consensus       154 ~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-------------~~~~~~~~~~~  218 (385)
                      ....  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....             ....+......
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE  259 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence            2211  23345688899999999999999999999999999999999999854211             11111222223


Q ss_pred             CCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          219 SDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       219 ~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ...+..+..+++++.+||.+||++||.+|||+.|++++
T Consensus       260 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            33455577799999999999999999999999999764


No 206
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=8e-47  Score=362.65  Aligned_cols=246  Identities=21%  Similarity=0.291  Sum_probs=202.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcE----EEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEV----FAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~----~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|+++.+++.    +|+|.+....    ...+.+|+.++++++||||+++++++.. ..    
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~----   88 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SS----   88 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SS----
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Cc----
Confidence            689999999999999999999888876    6777664322    2456689999999999999999998642 22    


Q ss_pred             EEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           74 YNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      .++||||+++|+|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus        89 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~a~~~~  166 (325)
T 3kex_A           89 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQ--VQVADFGVADLLP  166 (325)
T ss_dssp             EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSC--EEECSCSGGGGSC
T ss_pred             cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCe--EEECCCCcccccC
Confidence            5689999999999999985 357999999999999999999999999999999999999987766  9999999998764


Q ss_pred             ccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          153 VNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       153 ~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      ..... ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||...... .....+ ........+..++.
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~  244 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-EVPDLL-EKGERLAQPQICTI  244 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-HHHHHH-HTTCBCCCCTTBCT
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-HHHHHH-HcCCCCCCCCcCcH
Confidence            33222 2344568889999999999999999999999999999999 99999875432 222222 22334455666888


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ++.+||.+||..||.+|||+.|++++
T Consensus       245 ~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          245 DVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999999986


No 207
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.1e-46  Score=349.79  Aligned_cols=248  Identities=23%  Similarity=0.323  Sum_probs=205.8

Q ss_pred             Cceeec-eeeccCceEEEEEEEC--CCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQ-TIGRGSTATVSIGMSN--RSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~-~LG~G~~g~Vy~a~~~--~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|.+.+ .||+|+||+||+|.++  .++..+|+|.+....    .+.+.+|++++++++||||+++++++. ...    +
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~----~   84 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEA----L   84 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSS----E
T ss_pred             HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCC----c
Confidence            355655 9999999999999864  468889999987642    356789999999999999999999873 222    5


Q ss_pred             EEEEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++++|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++.....
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY--AKISDFGLSKALGA  162 (287)
T ss_dssp             EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE--EEECCCTTCEECTT
T ss_pred             EEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCC--EEECcccceeeecc
Confidence            69999999999999997 4456999999999999999999999999999999999999987765  99999999987643


Q ss_pred             cCC--CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          154 NED--DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       154 ~~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      ...  .......||+.|+|||++.+..++.++|||||||++|+|++ |+.||...... .....+. ....+..+..+++
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~i~-~~~~~~~~~~~~~  240 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFIE-QGKRMECPPECPP  240 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-HHHHHHH-TTCCCCCCTTCCH
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHh-cCCcCCCCCCcCH
Confidence            222  12233457899999999998889999999999999999998 99999875443 3333332 2344566778999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhCcc
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEHGF  258 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~hp~  258 (385)
                      ++.+||.+||..||.+|||+.+++++.+
T Consensus       241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          241 ELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9999999999999999999999998754


No 208
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2.8e-46  Score=352.70  Aligned_cols=244  Identities=27%  Similarity=0.458  Sum_probs=191.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|+++.   .+|+|.+....     .+.+.+|+.+|++++||||++++++... ..    +++
T Consensus        25 ~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~----~~l   96 (289)
T 3og7_A           25 QITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQ----LAI   96 (289)
T ss_dssp             SCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS----CEE
T ss_pred             ceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC-Cc----cEE
Confidence            58999999999999999998753   58999886432     3567899999999999999999986432 22    558


Q ss_pred             EEeecCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||++|++|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++......
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~  174 (289)
T 3og7_A           97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWS  174 (289)
T ss_dssp             EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE--EEECCCC---------
T ss_pred             EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC--EEEccceecccccccc
Confidence            999999999999996 4567999999999999999999999999999999999999998765  9999999998653211


Q ss_pred             -CCCCCccccCCcccChhhhc---CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc---CCCCCCCCCCcC
Q 040569          156 -DDEGKPICGTPICMAPEVAR---GEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG---FSSDTPEIPGYM  228 (385)
Q Consensus       156 -~~~~~~~~Gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~  228 (385)
                       ........||+.|+|||++.   +..++.++|||||||++|+|++|+.||....+.......+.   .......+...+
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (289)
T 3og7_A          175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC  254 (289)
T ss_dssp             ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTS
T ss_pred             ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccC
Confidence             22234457999999999997   55678899999999999999999999987666554444332   223334455678


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ++.+.+||.+||+.||.+|||+.++++
T Consensus       255 ~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          255 PKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            999999999999999999999999986


No 209
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.7e-46  Score=350.26  Aligned_cols=248  Identities=23%  Similarity=0.272  Sum_probs=203.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCc---EEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSE---VFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~---~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      .|..++.||+|+||+||+|.+..+++   .+|+|.+....    .+.+.+|+.++++++||||+++++++......   .
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---~   98 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL---P   98 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC---C
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCC---c
Confidence            46778999999999999999765544   79999887533    25677999999999999999999987655431   3


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      +++|||+.+|+|.+++.. +..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus        99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~~~  176 (298)
T 3pls_A           99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFT--VKVADFGLARDILD  176 (298)
T ss_dssp             EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC--EEECCTTSSCTTTT
T ss_pred             EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc--EEeCcCCCcccccC
Confidence            589999999999999985 567899999999999999999999999999999999999987765  99999999985432


Q ss_pred             c---CCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          154 N---EDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       154 ~---~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      .   .........||+.|+|||.+.+..++.++|||||||++|+|++|..|+....+.......+.. ......+..+++
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  255 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ-GRRLPQPEYCPD  255 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT-TCCCCCCTTCCH
T ss_pred             CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc-CCCCCCCccchH
Confidence            2   122234456899999999999999999999999999999999965554443444444444322 233445667899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .+.+||.+||+.||.+|||+.++++
T Consensus       256 ~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          256 SLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999999987


No 210
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=4e-46  Score=358.61  Aligned_cols=246  Identities=21%  Similarity=0.319  Sum_probs=199.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEE----EEEeccC----CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVF----AVKSAEL----SNSEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~----AvK~~~~----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|++..+++.+    |+|.+..    ...+.+.+|+.++++++||||+++++++....     
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----   90 (327)
T 3lzb_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-----   90 (327)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-----
T ss_pred             HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-----
Confidence            6999999999999999999998888765    6666532    24577889999999999999999999876532     


Q ss_pred             EEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           74 YNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      .++++||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus        91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kL~DfG~a~~~~  168 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLG  168 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE--EEECCTTC-----
T ss_pred             ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCC--EEEccCcceeEcc
Confidence            5589999999999999984 567999999999999999999999999999999999999987766  9999999998764


Q ss_pred             ccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          153 VNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       153 ~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      ..... ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||...... .....+. .......+..++.
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~-~~~~~~~~~~~~~  246 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILE-KGERLPQPPICTI  246 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHH-TTCCCCCCTTBCH
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHH-cCCCCCCCccCCH
Confidence            32221 2233457889999999999999999999999999999999 99999865332 2222222 2334445667899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ++.+||.+||..||.+|||+.|+++.
T Consensus       247 ~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          247 DVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999999999973


No 211
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.9e-46  Score=358.48  Aligned_cols=247  Identities=21%  Similarity=0.315  Sum_probs=206.2

Q ss_pred             CceeeceeeccCceEEEEEEEC-----CCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-----RSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++.+.||+|+||+||+|+++     .+++.||+|.+....    ...+.+|+.++++++||||+++++++.....   
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---  102 (322)
T 1p4o_A           26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP---  102 (322)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS---
T ss_pred             heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc---
Confidence            4889999999999999999886     467899999987543    2357799999999999999999998765443   


Q ss_pred             EEEEEEeecCCCCHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEE
Q 040569           73 LYNLFLEYAPGGTLTDAIRSG----------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKI  142 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~----------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL  142 (385)
                       +++||||++||+|.+++...          ..+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||
T Consensus       103 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~--~kl  179 (322)
T 1p4o_A          103 -TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT--VKI  179 (322)
T ss_dssp             -CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC--EEE
T ss_pred             -cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe--EEE
Confidence             56899999999999999741          45799999999999999999999999999999999999987765  999


Q ss_pred             eecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCC
Q 040569          143 ADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSD  220 (385)
Q Consensus       143 ~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~  220 (385)
                      +|||+++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||... +.......+ ....
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~-~~~~  257 (322)
T 1p4o_A          180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFV-MEGG  257 (322)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHHH-HTTC
T ss_pred             CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-CHHHHHHHH-HcCC
Confidence            999999865332211 1223467899999999999999999999999999999999 89999765 333333333 2334


Q ss_pred             CCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          221 TPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       221 ~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      .+..+..+++.+.+||.+||+.||.+|||+.|+++|
T Consensus       258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          258 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            455667799999999999999999999999999986


No 212
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=5.5e-47  Score=362.74  Aligned_cols=249  Identities=21%  Similarity=0.243  Sum_probs=201.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      +|+..+.||+|+||+||+|+++ +++.||||.+....   .+.+.+|+.+|++++||||+++++++.....    +++||
T Consensus        40 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~lv~  114 (321)
T 2qkw_B           40 NFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE----MILIY  114 (321)
T ss_dssp             CCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC----CEEEE
T ss_pred             ccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe----EEEEE
Confidence            5889999999999999999964 78999999886543   4678899999999999999999998765443    56899


Q ss_pred             eecCCCCHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           79 EYAPGGTLTDAIRSG----TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~----~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ||++||+|.+++...    ..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....
T Consensus       115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~  192 (321)
T 2qkw_B          115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFV--PKITDFGISKKGTEL  192 (321)
T ss_dssp             ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCC--EEECCCTTCEECSSS
T ss_pred             EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCC--EEEeecccccccccc
Confidence            999999999999743    25899999999999999999999999999999999999987665  999999999875422


Q ss_pred             CC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCh-----HHHHH-HhcC--------CC
Q 040569          155 ED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADP-----ISALH-RIGF--------SS  219 (385)
Q Consensus       155 ~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~-~~~~--------~~  219 (385)
                      .. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||......     ..... ....        ..
T Consensus       193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (321)
T 2qkw_B          193 DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN  272 (321)
T ss_dssp             SCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSS
T ss_pred             cccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChh
Confidence            22 2233456999999999999999999999999999999999999999653211     11000 0000        00


Q ss_pred             CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCc
Q 040569          220 DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHG  257 (385)
Q Consensus       220 ~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp  257 (385)
                      ....++...+..+.+++.+||+.||.+|||+.|++++.
T Consensus       273 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             CTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            11122333567789999999999999999999999864


No 213
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=1.4e-46  Score=361.38  Aligned_cols=248  Identities=22%  Similarity=0.297  Sum_probs=205.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCc-----EEEEEeccCCC----HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSE-----VFAVKSAELSN----SEFLQREQRILSAL-ACPQIVAYKGCDISEENGK   71 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~-----~~AvK~~~~~~----~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   71 (385)
                      +|++++.||+|+||+||+|.+..+++     .+|+|.+....    .+.+.+|+.+|+++ +||||+++++++.....  
T Consensus        47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--  124 (333)
T 2i1m_A           47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP--  124 (333)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred             HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc--
Confidence            58899999999999999999987664     79999987543    35678999999999 89999999998765544  


Q ss_pred             EEEEEEEeecCCCCHHHHHHc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC
Q 040569           72 ILYNLFLEYAPGGTLTDAIRS--------------GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE  137 (385)
Q Consensus        72 ~~~~lv~Ey~~ggsL~~~l~~--------------~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~  137 (385)
                        +++||||+++|+|.+++..              ...+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus       125 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~  202 (333)
T 2i1m_A          125 --VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV  202 (333)
T ss_dssp             --CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGE
T ss_pred             --eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCe
Confidence              6689999999999999973              345899999999999999999999999999999999999987765


Q ss_pred             CCeEEeecCceeeecccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHh
Q 040569          138 QGAKIADFGCARRARVNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRI  215 (385)
Q Consensus       138 ~~~kL~DFG~a~~~~~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~  215 (385)
                        +||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |..||............+
T Consensus       203 --~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  280 (333)
T 2i1m_A          203 --AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV  280 (333)
T ss_dssp             --EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred             --EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence              999999999865433221 1234467889999999999899999999999999999998 999998754433322222


Q ss_pred             cCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          216 GFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       216 ~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                       .....+..+...++.+.+||.+||+.||.+|||+.|++++
T Consensus       281 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          281 -KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             -HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence             1223344566689999999999999999999999999874


No 214
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=4.5e-46  Score=358.59  Aligned_cols=247  Identities=23%  Similarity=0.344  Sum_probs=204.6

Q ss_pred             CceeeceeeccCceEEEEEEEC-------CCCcEEEEEeccCCC----HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccC
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN-------RSSEVFAVKSAELSN----SEFLQREQRILSAL-ACPQIVAYKGCDISEEN   69 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~-------~~~~~~AvK~~~~~~----~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~   69 (385)
                      +|++++.||+|+||+||+|.+.       .+++.||+|.+....    .+.+.+|+.+++++ +||||+++++++.....
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  115 (334)
T 2pvf_A           36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP  115 (334)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCc
Confidence            5889999999999999999986       467889999987543    24577999999999 99999999998765543


Q ss_pred             CeEEEEEEEeecCCCCHHHHHHcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee
Q 040569           70 GKILYNLFLEYAPGGTLTDAIRSGT----------------CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS  133 (385)
Q Consensus        70 ~~~~~~lv~Ey~~ggsL~~~l~~~~----------------~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~  133 (385)
                          +++||||+++|+|.+++....                .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus       116 ----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  191 (334)
T 2pvf_A          116 ----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT  191 (334)
T ss_dssp             ----CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             ----eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEc
Confidence                668999999999999998543                389999999999999999999999999999999999998


Q ss_pred             cCCCCCeEEeecCceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHH
Q 040569          134 KDNEQGAKIADFGCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISA  211 (385)
Q Consensus       134 ~~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~  211 (385)
                      .++.  +||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|+|++ |+.||... .....
T Consensus       192 ~~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~  268 (334)
T 2pvf_A          192 ENNV--MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEEL  268 (334)
T ss_dssp             TTCC--EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHH
T ss_pred             CCCC--EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-CHHHH
Confidence            7765  99999999987643221 12233457889999999998889999999999999999999 99999764 33333


Q ss_pred             HHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          212 LHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       212 ~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ...+. ....+..+..+++++.+||.+||..||.+|||+.|++++
T Consensus       269 ~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          269 FKLLK-EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            33322 223445667789999999999999999999999999975


No 215
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.7e-46  Score=358.90  Aligned_cols=245  Identities=25%  Similarity=0.327  Sum_probs=204.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEE--EEEeccCC----CHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVF--AVKSAELS----NSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~--AvK~~~~~----~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|+++.++..+  |+|.+...    ..+.+.+|+++|+++ +||||+++++++.....    +
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~----~  101 (327)
T 1fvr_A           26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY----L  101 (327)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE----E
T ss_pred             HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc----e
Confidence            5899999999999999999999888866  89987642    234678999999999 99999999998865543    6


Q ss_pred             EEEEeecCCCCHHHHHHcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCC
Q 040569           75 NLFLEYAPGGTLTDAIRSGT----------------CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQ  138 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~----------------~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~  138 (385)
                      ++||||+++|+|.+++...+                .+++..++.++.||+.||.|||++||+||||||+|||++.++. 
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~-  180 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV-  180 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC-
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCe-
Confidence            79999999999999998543                6999999999999999999999999999999999999987765 


Q ss_pred             CeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcC
Q 040569          139 GAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGF  217 (385)
Q Consensus       139 ~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~  217 (385)
                       +||+|||+++......  ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||... +.......+. 
T Consensus       181 -~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-~~~~~~~~~~-  255 (327)
T 1fvr_A          181 -AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLP-  255 (327)
T ss_dssp             -EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHGG-
T ss_pred             -EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-cHHHHHHHhh-
Confidence             9999999998543221  2233457889999999998889999999999999999998 99999774 3333434432 


Q ss_pred             CCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          218 SSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       218 ~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ....+..+..+++++.+||.+||..||.+|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          256 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            233445566789999999999999999999999999986


No 216
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.4e-46  Score=356.93  Aligned_cols=250  Identities=24%  Similarity=0.345  Sum_probs=201.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhc--CCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSAL--ACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l--~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|+++  ++.||||.+.........+|.+++..+  +||||+++++++.........+++|||
T Consensus        38 ~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e  115 (337)
T 3mdy_A           38 QIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITD  115 (337)
T ss_dssp             HCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEEC
T ss_pred             ceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEe
Confidence            4899999999999999999986  899999999776666777777777765  999999999988766433334679999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSN--------GIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~--------givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      |+++|+|.++++.. .+++..+..++.||+.||.|||++        ||+||||||+|||++.++.  +||+|||+++..
T Consensus       116 ~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~--~kl~Dfg~a~~~  192 (337)
T 3mdy_A          116 YHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVKF  192 (337)
T ss_dssp             CCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC--EEECCCTTCEEC
T ss_pred             ccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC--EEEEeCCCceee
Confidence            99999999999865 599999999999999999999999        9999999999999987765  999999999876


Q ss_pred             cccCCC---CCCccccCCcccChhhhcCCCCCCC------CChHHHHHHHHHHHhC----------CCCCCCCC---Ch-
Q 040569          152 RVNEDD---EGKPICGTPICMAPEVARGEEQGFP------ADVWALGCTVLEMATG----------RPPWPDVA---DP-  208 (385)
Q Consensus       152 ~~~~~~---~~~~~~Gt~~y~aPE~~~~~~~~~~------~DiwSlG~il~elltG----------~~Pf~~~~---~~-  208 (385)
                      ......   .....+||+.|+|||++.+......      +|||||||++|||++|          +.||....   .. 
T Consensus       193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~  272 (337)
T 3mdy_A          193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY  272 (337)
T ss_dssp             C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch
Confidence            433222   1234579999999999988877665      9999999999999999          77775431   11 


Q ss_pred             HHHHHHhcCCCCCCCCCC-----cCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          209 ISALHRIGFSSDTPEIPG-----YMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~-----~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ......+......+.++.     .+++++.+||.+||+.||.+|||+.|+++|
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            122222223333444443     456779999999999999999999999986


No 217
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=1e-45  Score=371.15  Aligned_cols=241  Identities=26%  Similarity=0.389  Sum_probs=202.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++.+.||+|+||+||+|.++  ++.||||.+... ..+.+.+|+++|++++||||+++++++......   +++||||
T Consensus       194 ~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~iv~e~  268 (450)
T 1k9a_A          194 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG---LYIVTEY  268 (450)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC---EEEEEEC
T ss_pred             HeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc---eEEEEEe
Confidence            4788999999999999999986  789999998754 356788999999999999999999987654421   5699999


Q ss_pred             cCCCCHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           81 APGGTLTDAIRSGT--CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        81 ~~ggsL~~~l~~~~--~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      +++|+|.++++..+  .+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++.....    
T Consensus       269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~----  342 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEASST----  342 (450)
T ss_dssp             CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSC--EEECCCTTCEECC------
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCC--EEEeeCCCccccccc----
Confidence            99999999998533  3799999999999999999999999999999999999987765  999999999865322    


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      .....+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+. .......|..+++++.+||.
T Consensus       343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i~-~~~~~~~p~~~~~~l~~li~  420 (450)
T 1k9a_A          343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPRVE-KGYKMDAPDGCPPAVYDVMK  420 (450)
T ss_dssp             ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-HHHHHH-TTCCCCCCTTCCHHHHHHHH
T ss_pred             ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH-cCCCCCCCCcCCHHHHHHHH
Confidence            122357889999999999999999999999999999998 999998754332 222322 23345567789999999999


Q ss_pred             HhhhcCCCCCCCHHHHHh
Q 040569          238 KCLIRNPGERWSASELLE  255 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~  255 (385)
                      +||+.||.+|||+.++++
T Consensus       421 ~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          421 NCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCChhHCcCHHHHHH
Confidence            999999999999999976


No 218
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=2.1e-46  Score=374.44  Aligned_cols=254  Identities=24%  Similarity=0.320  Sum_probs=193.8

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEEEEEEEeec
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSAL-ACPQIVAYKGCDISEENGKILYNLFLEYA   81 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~~~lv~Ey~   81 (385)
                      |...+.||+|+||+||.+ ...+|+.||||.+.....+.+.+|+.+|+++ +||||+++++++....    .+++|||||
T Consensus        17 ~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~----~~~lv~E~~   91 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDR----FLYIALELC   91 (434)
T ss_dssp             EEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS----EEEEEECCC
T ss_pred             eeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCC----eEEEEEecC
Confidence            456789999999999875 4467999999998876677788999999987 8999999998875443    267999999


Q ss_pred             CCCCHHHHHHcCCCCC-------HHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-----------CCCeEEe
Q 040569           82 PGGTLTDAIRSGTCLE-------EGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-----------EQGAKIA  143 (385)
Q Consensus        82 ~ggsL~~~l~~~~~l~-------e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-----------~~~~kL~  143 (385)
                      . |+|.+++.......       +..+..++.||+.||+|||++||+||||||+|||++.++           ...+||+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~  170 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS  170 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence            6 59999998654332       334578999999999999999999999999999997542           2348999


Q ss_pred             ecCceeeecccCCC---CCCccccCCcccChhhhcC-------CCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHH
Q 040569          144 DFGCARRARVNEDD---EGKPICGTPICMAPEVARG-------EEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISAL  212 (385)
Q Consensus       144 DFG~a~~~~~~~~~---~~~~~~Gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~  212 (385)
                      |||+++........   .....+||+.|+|||++.+       ..++.++|||||||++|+|++ |+.||.........+
T Consensus       171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i  250 (434)
T 2rio_A          171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI  250 (434)
T ss_dssp             CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHH
T ss_pred             ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHH
Confidence            99999976433221   1234579999999999976       568899999999999999999 999997654443333


Q ss_pred             HHhcCCCCC-CC-CCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          213 HRIGFSSDT-PE-IPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       213 ~~~~~~~~~-~~-~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ......... +. .+..+++++++||.+||+.||.+|||+.|+|+||||...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            222111111 11 122356889999999999999999999999999999754


No 219
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2.8e-46  Score=366.42  Aligned_cols=246  Identities=18%  Similarity=0.296  Sum_probs=193.1

Q ss_pred             CceeeceeeccCceEEEEEEEC---CCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSN---RSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|+++   .++..||||.+....    .+.+.+|+.+|++++||||+++++++.....    +
T Consensus        46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~  121 (373)
T 2qol_A           46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP----V  121 (373)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS----C
T ss_pred             hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc----e
Confidence            5889999999999999999987   567889999987542    3467899999999999999999998765543    5


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||++||+|.+++.. +..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV--CKVSDFGLGRVLED  199 (373)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCC--------
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCC--EEECcCcccccccc
Confidence            689999999999999985 447999999999999999999999999999999999999987765  99999999987643


Q ss_pred             cCCCC--CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCH
Q 040569          154 NEDDE--GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSK  230 (385)
Q Consensus       154 ~~~~~--~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (385)
                      .....  .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.. ......+..++.
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-~~~~~~~i~~-~~~~~~~~~~~~  277 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-NQDVIKAVDE-GYRLPPPMDCPA  277 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-HHHHHHHHHT-TEECCCCTTCBH
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHc-CCCCCCCccccH
Confidence            32211  122245778999999999999999999999999999998 999997753 3333333322 222334556899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .+.+||.+||++||.+||++.++++
T Consensus       278 ~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          278 ALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhCcChhhCcCHHHHHH
Confidence            9999999999999999999999986


No 220
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=9.9e-46  Score=349.69  Aligned_cols=247  Identities=25%  Similarity=0.300  Sum_probs=199.4

Q ss_pred             CceeeceeeccCceEEEEEEECCC---CcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS---SEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~---~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++.+.||+|+||+||+|.+..+   ...+|+|.+....    .+.+.+|+.++++++||||+++++++......   .
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---~  102 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS---P  102 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC---C
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc---e
Confidence            588999999999999999997543   3468999886533    25677999999999999999999986544332   5


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~--~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT--VKVADFGLARDMYD  180 (298)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC--EEECSCGGGCCCSC
T ss_pred             EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCC--EEECcccccccccc
Confidence            589999999999999984 556899999999999999999999999999999999999987665  99999999986533


Q ss_pred             cCC---CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCC
Q 040569          154 NED---DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMS  229 (385)
Q Consensus       154 ~~~---~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s  229 (385)
                      ...   .......||+.|+|||++.+..++.++|||||||++|+|++ |.+||......... ..+ .....+..+..++
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~  258 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYL-LQGRRLLQPEYCP  258 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH-HHH-HTTCCCCCCTTCC
T ss_pred             cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH-HHH-hcCCCCCCCccCC
Confidence            221   12334567889999999999999999999999999999999 66777654333222 222 1233444566789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          230 KQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      +.+.++|.+||..||.+|||+.|+++
T Consensus       259 ~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          259 DPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999987


No 221
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=6.9e-46  Score=353.45  Aligned_cols=251  Identities=21%  Similarity=0.298  Sum_probs=196.6

Q ss_pred             CceeeceeeccCceEEEEEEECC---CCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCC-eE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNR---SSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENG-KI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~---~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~-~~   72 (385)
                      +|++++.||+|+||+||+|.+..   +++.||+|.+....     .+.+.+|+.++++++||||+++++++...... ..
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~  114 (313)
T 3brb_A           35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP  114 (313)
T ss_dssp             GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred             HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence            58899999999999999998765   56689999986432     24577899999999999999999988765432 12


Q ss_pred             EEEEEEeecCCCCHHHHHH------cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecC
Q 040569           73 LYNLFLEYAPGGTLTDAIR------SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFG  146 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~------~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG  146 (385)
                      ..++||||+++|+|.+++.      ....+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||
T Consensus       115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~--~kl~Dfg  192 (313)
T 3brb_A          115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT--VCVADFG  192 (313)
T ss_dssp             CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC--EEECSCS
T ss_pred             ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc--EEEeecC
Confidence            3569999999999999994      3456999999999999999999999999999999999999987765  9999999


Q ss_pred             ceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCC
Q 040569          147 CARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEI  224 (385)
Q Consensus       147 ~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~  224 (385)
                      +++....... .......|++.|+|||++.+..++.++|||||||++|+|++ |..||....... ....+ .....+..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~-~~~~~~~~  270 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-MYDYL-LHGHRLKQ  270 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHHHH-HTTCCCCC
T ss_pred             cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHH-HcCCCCCC
Confidence            9987643221 12234457889999999999999999999999999999999 999998754332 22222 22334556


Q ss_pred             CCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          225 PGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       225 ~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      +..+++++.+||.+||..||.+|||+.+++++
T Consensus       271 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          271 PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            67789999999999999999999999999875


No 222
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=2.4e-46  Score=359.24  Aligned_cols=255  Identities=24%  Similarity=0.278  Sum_probs=205.5

Q ss_pred             CceeeceeeccCceEEEEEE-----ECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGM-----SNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~-----~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|+     +..+++.||||.+....    ...+.+|+.++++++||||+++++++.....   
T Consensus        31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---  107 (327)
T 2yfx_A           31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP---  107 (327)
T ss_dssp             GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS---
T ss_pred             heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC---
Confidence            58999999999999999999     56788999999986432    3467789999999999999999998776544   


Q ss_pred             EEEEEEeecCCCCHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEee
Q 040569           73 LYNLFLEYAPGGTLTDAIRSG-------TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIAD  144 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~~-------~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~D  144 (385)
                       +++||||++||+|.+++...       ..+++..+..++.||+.||.|||++||+||||||+|||++.++ ...+||+|
T Consensus       108 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~D  186 (327)
T 2yfx_A          108 -RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD  186 (327)
T ss_dssp             -CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             -cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECc
Confidence             56899999999999999854       3489999999999999999999999999999999999998543 23489999


Q ss_pred             cCceeeecccCC-CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCC
Q 040569          145 FGCARRARVNED-DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTP  222 (385)
Q Consensus       145 FG~a~~~~~~~~-~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~  222 (385)
                      ||+++....... .......||+.|+|||++.+..++.++|||||||++|+|++ |+.||... ........+. ....+
T Consensus       187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~-~~~~~  264 (327)
T 2yfx_A          187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQEVLEFVT-SGGRM  264 (327)
T ss_dssp             CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHH-TTCCC
T ss_pred             cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-CHHHHHHHHh-cCCCC
Confidence            999975432221 22334568999999999998899999999999999999998 99999764 3333333332 33345


Q ss_pred             CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          223 EIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       223 ~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ..+..+++.+.+||.+||+.||.+|||+.++++|.+....
T Consensus       265 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          265 DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            5667789999999999999999999999999999886543


No 223
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.8e-47  Score=372.59  Aligned_cols=251  Identities=24%  Similarity=0.372  Sum_probs=201.3

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC----CCHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL----SNSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||++..    ...+.+.+|+++|++++||||+++++++.......  .++|
T Consensus        10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~--~~lv   87 (396)
T 4eut_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH--KVLI   87 (396)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC--EEEE
T ss_pred             ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCe--eEEE
Confidence            48999999999999999999999999999999864    34567789999999999999999999877654333  5689


Q ss_pred             EeecCCCCHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeec--CCCCCeEEeecCceeeec
Q 040569           78 LEYAPGGTLTDAIRSGT---CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSK--DNEQGAKIADFGCARRAR  152 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~---~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~--~~~~~~kL~DFG~a~~~~  152 (385)
                      |||++||+|.+++....   .+++..++.++.||+.||+|||++||+||||||+|||+..  ++...+||+|||+++...
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            99999999999997432   3999999999999999999999999999999999999832  222238999999998764


Q ss_pred             ccCCCCCCccccCCcccChhhhcC--------CCCCCCCChHHHHHHHHHHHhCCCCCCCCC---ChHHHHHHhcCCCC-
Q 040569          153 VNEDDEGKPICGTPICMAPEVARG--------EEQGFPADVWALGCTVLEMATGRPPWPDVA---DPISALHRIGFSSD-  220 (385)
Q Consensus       153 ~~~~~~~~~~~Gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~elltG~~Pf~~~~---~~~~~~~~~~~~~~-  220 (385)
                      ...  .....+||+.|+|||++.+        ..++.++|||||||++|+|++|+.||....   .....+..+..... 
T Consensus       168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~  245 (396)
T 4eut_A          168 DDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (396)
T ss_dssp             CGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred             CCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence            322  2334579999999999875        567789999999999999999999996432   22233333211111 


Q ss_pred             ----------------------CCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          221 ----------------------TPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       221 ----------------------~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                                            ...++..+++.+.+||.+||+.||.+|||+.|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence                                  011223356788999999999999999999999764


No 224
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=3.5e-46  Score=374.83  Aligned_cols=244  Identities=22%  Similarity=0.325  Sum_probs=203.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.++ ++..||||.+...  ..+.+.+|+++|++++||||+++++++. ...    +++|||
T Consensus       189 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~----~~lv~e  262 (454)
T 1qcf_A          189 SLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP----IYIITE  262 (454)
T ss_dssp             GEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS----CEEEEC
T ss_pred             HeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc----cEEEEe
Confidence            4788999999999999999986 4678999998753  4678889999999999999999999864 222    568999


Q ss_pred             ecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           80 YAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        80 y~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |+++|+|.++++..  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus       263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV--CKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCC--EEECSTTGGGGBCCHHHH
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCc--EEEeeCCCceEcCCCcee
Confidence            99999999999843  36899999999999999999999999999999999999987765  999999999875332222


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFL  236 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  236 (385)
                      ......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.. ......|..+++++.+||
T Consensus       341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-~~~~~~i~~-~~~~~~~~~~~~~l~~li  418 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-PEVIRALER-GYRMPRPENCPEELYNIM  418 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHH-TCCCCCCTTSCHHHHHHH
T ss_pred             ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHc-CCCCCCCCCCCHHHHHHH
Confidence            2233456789999999998999999999999999999999 9999987543 333333322 223344667899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHh
Q 040569          237 SKCLIRNPGERWSASELLE  255 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~  255 (385)
                      .+||..||.+|||+.++++
T Consensus       419 ~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          419 MRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHH
Confidence            9999999999999999976


No 225
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=4.6e-46  Score=362.99  Aligned_cols=244  Identities=16%  Similarity=0.148  Sum_probs=198.9

Q ss_pred             CceeeceeeccCceEEEEE-----EECCCCcEEEEEeccCCCHHHHHHHHHHHHhcC---CCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIG-----MSNRSSEVFAVKSAELSNSEFLQREQRILSALA---CPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a-----~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|     .+..+++.||||.+.......+.+|.++++.+.   |+||+++++++.....    
T Consensus        66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~----  141 (365)
T 3e7e_A           66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG----  141 (365)
T ss_dssp             EEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC----
T ss_pred             EEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC----
Confidence            4889999999999999999     467889999999999888888999999999996   8999999998876554    


Q ss_pred             EEEEEeecCCCCHHHHHH-----cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeec-----------CCC
Q 040569           74 YNLFLEYAPGGTLTDAIR-----SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSK-----------DNE  137 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~-----~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~-----------~~~  137 (385)
                      .++||||++||+|.+++.     ....+++..+..++.||+.||+|||++||+||||||+|||++.           ++.
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTT
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCC
Confidence            669999999999999997     3567999999999999999999999999999999999999986           444


Q ss_pred             CCeEEeecCceeeecccC-CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc
Q 040569          138 QGAKIADFGCARRARVNE-DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG  216 (385)
Q Consensus       138 ~~~kL~DFG~a~~~~~~~-~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~  216 (385)
                        +||+|||+|+...... .......+||+.|||||++.+..++.++|||||||++|||++|+.||.......     ..
T Consensus       222 --~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~  294 (365)
T 3e7e_A          222 --LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----CK  294 (365)
T ss_dssp             --EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----EE
T ss_pred             --EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----ee
Confidence              9999999998654222 222345679999999999999999999999999999999999999996432210     00


Q ss_pred             CCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcc
Q 040569          217 FSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGF  258 (385)
Q Consensus       217 ~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~  258 (385)
                      ........  ..++.+.+++.+||+.+|.+|++..+.|.+.+
T Consensus       295 ~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l  334 (365)
T 3e7e_A          295 PEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL  334 (365)
T ss_dssp             ECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred             echhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence            11111222  25788999999999999999976655555433


No 226
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=8.1e-46  Score=347.10  Aligned_cols=241  Identities=26%  Similarity=0.375  Sum_probs=197.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++.+.||+|+||+||+|.++  ++.+|+|.+... ..+.+.+|++++++++||||+++++++.....   .+++||||
T Consensus        22 ~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e~   96 (278)
T 1byg_A           22 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEY   96 (278)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECC
T ss_pred             hceEEeEEecCCCceEEEEEEc--CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEEEec
Confidence            5899999999999999999875  889999998754 35678899999999999999999998654432   25689999


Q ss_pred             cCCCCHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC
Q 040569           81 APGGTLTDAIRSGT--CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE  158 (385)
Q Consensus        81 ~~ggsL~~~l~~~~--~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~  158 (385)
                      +++|+|.+++...+  .+++..+..++.||+.||.|||++|++||||||+||+++.++.  +||+|||++......    
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~~l~Dfg~~~~~~~~----  170 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEASST----  170 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC--EEECCCCC-----------
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCc--EEEeecccccccccc----
Confidence            99999999998543  3899999999999999999999999999999999999987765  999999999865322    


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      .....+++.|+|||++.+..++.++|||||||++|+|++ |+.||.... .......+. ....+..+..+++.+.++|.
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~  248 (278)
T 1byg_A          171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVE-KGYKMDAPDGCPPAVYEVMK  248 (278)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-GGGHHHHHT-TTCCCCCCTTCCHHHHHHHH
T ss_pred             ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHh-cCCCCCCcccCCHHHHHHHH
Confidence            223357899999999999899999999999999999998 999997653 233333332 23345567778999999999


Q ss_pred             HhhhcCCCCCCCHHHHHh
Q 040569          238 KCLIRNPGERWSASELLE  255 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~  255 (385)
                      +||..||.+|||+.|+++
T Consensus       249 ~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          249 NCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCChhhCCCHHHHHH
Confidence            999999999999999986


No 227
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.3e-45  Score=354.81  Aligned_cols=249  Identities=25%  Similarity=0.311  Sum_probs=193.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHH--hcCCCCeeeeeeeeee-ccCCeEEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILS--ALACPQIVAYKGCDIS-EENGKILYNLFL   78 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~--~l~hpnIv~~~~~~~~-~~~~~~~~~lv~   78 (385)
                      +|++++.||+|+||+||+|++  +++.||||++.......+.+|.+++.  .++||||+++++.+.. ...+...+++||
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~   91 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM   91 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred             HhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence            689999999999999999976  58999999998776666666666654  5899999999976543 223344467999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CceeccCCCCCEEeecCCCCCeEEeecCcee
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSN---------GIVHCDIKGQNILVSKDNEQGAKIADFGCAR  149 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~---------givHrDlKp~NILi~~~~~~~~kL~DFG~a~  149 (385)
                      ||+++|+|.++++... +++..+..++.||+.||.|||++         ||+||||||+|||++.++.  +||+|||+++
T Consensus        92 e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~--~kL~DFG~a~  168 (336)
T 3g2f_A           92 EYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT--CVISDFGLSM  168 (336)
T ss_dssp             CCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC--EEECCCTTCE
T ss_pred             ecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc--EEEeecccee
Confidence            9999999999998654 58999999999999999999999         9999999999999987765  9999999998


Q ss_pred             eecccCC-------CCCCccccCCcccChhhhcC-------CCCCCCCChHHHHHHHHHHHhCCCCCCCCCC--------
Q 040569          150 RARVNED-------DEGKPICGTPICMAPEVARG-------EEQGFPADVWALGCTVLEMATGRPPWPDVAD--------  207 (385)
Q Consensus       150 ~~~~~~~-------~~~~~~~Gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--------  207 (385)
                      .......       ......+||+.|+|||++.+       ..++.++|||||||++|||++|..||.....        
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~  248 (336)
T 3g2f_A          169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF  248 (336)
T ss_dssp             ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred             ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence            7643211       12234579999999999987       4566789999999999999999776632111        


Q ss_pred             ---------hHHHHHHhcCCCCCCCCCCc------CCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          208 ---------PISALHRIGFSSDTPEIPGY------MSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       208 ---------~~~~~~~~~~~~~~~~~~~~------~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                               ..............+.++..      .++++.+||.+||+.||.+|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          249 QTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             HHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence                     01111112222333444433      3458999999999999999999999965


No 228
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.1e-46  Score=362.48  Aligned_cols=248  Identities=19%  Similarity=0.264  Sum_probs=198.5

Q ss_pred             CceeeceeeccCceEEEEEEECCC--------CcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeee--------------
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS--------SEVFAVKSAELSNSEFLQREQRILSALACPQIVA--------------   59 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~--------~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~--------------   59 (385)
                      +|++.+.||+|+||+||+|+++.+        ++.||+|.+...  +.+.+|++++++++||||++              
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            589999999999999999999874        899999998754  46779999999999999998              


Q ss_pred             -eeeeeeeccCCeEEEEEEEeecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC
Q 040569           60 -YKGCDISEENGKILYNLFLEYAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN  136 (385)
Q Consensus        60 -~~~~~~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~  136 (385)
                       +++++.... .  .+++||||+ +++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus       121 ~~~~~~~~~~-~--~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          121 TCMGFGVHQD-K--YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CCCEEEEETT-T--EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             chhhccccCC-c--EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence             444443322 2  366999999 99999999864  6799999999999999999999999999999999999999766


Q ss_pred             CCCeEEeecCceeeecccCCC------CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-ChH
Q 040569          137 EQGAKIADFGCARRARVNEDD------EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVA-DPI  209 (385)
Q Consensus       137 ~~~~kL~DFG~a~~~~~~~~~------~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-~~~  209 (385)
                      ...+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... +..
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  276 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE  276 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence            224999999999876433221      1234579999999999999999999999999999999999999998654 222


Q ss_pred             HHHHHh-cCCCCCCCCC------CcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          210 SALHRI-GFSSDTPEIP------GYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       210 ~~~~~~-~~~~~~~~~~------~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ...... ......+.++      ..+++++.+||.+||..||.+|||+.++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          277 DIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            221111 0111111111      246899999999999999999999999987


No 229
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.9e-45  Score=353.30  Aligned_cols=247  Identities=21%  Similarity=0.274  Sum_probs=197.9

Q ss_pred             CceeeceeeccCceEEEEEEECCCC----cEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSS----EVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~----~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|.++.++    ..+|+|.+....    ...+.+|+.++++++||||+++++++.....    
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----  120 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP----  120 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS----
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC----
Confidence            5788999999999999999987553    459999987542    2457789999999999999999998765443    


Q ss_pred             EEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           74 YNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      +++||||+++|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus       121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV--CKVSDFGLSRVLE  198 (333)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCCCC-----
T ss_pred             cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCc--EEECCCCcchhhc
Confidence            6699999999999999984 467999999999999999999999999999999999999987665  9999999998764


Q ss_pred             ccCCC--CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCC
Q 040569          153 VNEDD--EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMS  229 (385)
Q Consensus       153 ~~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s  229 (385)
                      .....  ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||.... .......+.. ...+..+..++
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-~~~~~~~~~~-~~~~~~~~~~~  276 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-NHEVMKAIND-GFRLPTPMDCP  276 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-HHHHHHHHHT-TCCCCCCTTCB
T ss_pred             cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHC-CCcCCCcccCC
Confidence            32221  1122346789999999999999999999999999999999 999997653 3333333322 22344466789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          230 KQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      +.+.++|.+||+.||.+||++.+++++
T Consensus       277 ~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          277 SAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999999874


No 230
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=8.9e-46  Score=371.76  Aligned_cols=244  Identities=24%  Similarity=0.357  Sum_probs=199.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.++. +..||||.+...  ..+.+.+|+++|++++||||+++++++.. ..    +++|||
T Consensus       185 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~----~~iv~e  258 (452)
T 1fmk_A          185 SLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP----IYIVTE  258 (452)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS----CEEEEC
T ss_pred             HceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc----eEEEeh
Confidence            47889999999999999999975 467999998753  35778999999999999999999998754 22    568999


Q ss_pred             ecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           80 YAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        80 y~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |+++|+|.++++.  +..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++........
T Consensus       259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~~  336 (452)
T 1fmk_A          259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYT  336 (452)
T ss_dssp             CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCCCTTC--------
T ss_pred             hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCC--EEECCCccceecCCCcee
Confidence            9999999999973  456999999999999999999999999999999999999987665  999999999876433222


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFL  236 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  236 (385)
                      ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ....+..+. .......|..+++.+.+||
T Consensus       337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-~~~~~~~i~-~~~~~~~~~~~~~~l~~li  414 (452)
T 1fmk_A          337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQVE-RGYRMPCPPECPESLHDLM  414 (452)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHH-TTCCCCCCTTSCHHHHHHH
T ss_pred             cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-HHHHHHHHH-cCCCCCCCCCCCHHHHHHH
Confidence            2334457889999999999999999999999999999999 999998753 333333332 2333445667899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHh
Q 040569          237 SKCLIRNPGERWSASELLE  255 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~  255 (385)
                      .+||+.||.+|||+.++++
T Consensus       415 ~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          415 CQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHH
Confidence            9999999999999999986


No 231
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=9.1e-46  Score=354.23  Aligned_cols=248  Identities=22%  Similarity=0.343  Sum_probs=202.5

Q ss_pred             ceeeceeeccCceEEEEEE----ECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            3 WTRGQTIGRGSTATVSIGM----SNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~----~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      |++++.||+|+||+||++.    +..+++.||||++....    .+.+.+|+++|++++||||+++++++.......  +
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--~  110 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS--L  110 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE--E
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce--E
Confidence            4899999999999998775    44578999999987643    346789999999999999999999987654333  5


Q ss_pred             EEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeeccc
Q 040569           75 NLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVN  154 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~  154 (385)
                      ++||||+++|+|.+++.... +++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||++......
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~--~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          111 QLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEG  187 (318)
T ss_dssp             EEEECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC--EEECCGGGCEECCTT
T ss_pred             EEEEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCC--EEECCcccccccccc
Confidence            69999999999999998654 999999999999999999999999999999999999987765  999999999876432


Q ss_pred             CC--CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChH-------------HHHHHhcCCC
Q 040569          155 ED--DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPI-------------SALHRIGFSS  219 (385)
Q Consensus       155 ~~--~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-------------~~~~~~~~~~  219 (385)
                      ..  .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......             ..+.......
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG  267 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred             ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence            21  12234468889999999999899999999999999999999999996421110             0111112233


Q ss_pred             CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          220 DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       220 ~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      .....+..+++++.+||.+||+.||.+|||+.|+++
T Consensus       268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            445567778999999999999999999999999986


No 232
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-45  Score=361.74  Aligned_cols=248  Identities=25%  Similarity=0.300  Sum_probs=193.1

Q ss_pred             CceeeceeeccCceEEEEEEECCC---CcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS---SEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~---~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      .|++.+.||+|+||+||+|.+..+   +..+|+|.+....    .+.+.+|+.+|++++||||+++++++..... .  .
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~--~  166 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-S--P  166 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-C--C
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-C--e
Confidence            367889999999999999987543   3468999886432    3567899999999999999999998654432 1  4


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++|+|.++++. +..+++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT--VKVADFGLARDMYD  244 (373)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC--EEECCC--------
T ss_pred             EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCC--EEEeeccccccccc
Confidence            589999999999999985 456899999999999999999999999999999999999987765  99999999986532


Q ss_pred             cCCC---CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCC
Q 040569          154 NEDD---EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMS  229 (385)
Q Consensus       154 ~~~~---~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s  229 (385)
                      ....   ......||+.|+|||++.+..++.++|||||||++|+|++ |.+||......... ..+ .....+..|..++
T Consensus       245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-~~~-~~~~~~~~p~~~~  322 (373)
T 3c1x_A          245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYL-LQGRRLLQPEYCP  322 (373)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-HHH-HTTCCCCCCTTCC
T ss_pred             cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-HHH-HcCCCCCCCCCCC
Confidence            2211   1233457889999999999999999999999999999999 78888765433222 222 1223344566789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          230 KQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       230 ~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      +.+.++|.+||..||.+|||+.|++++
T Consensus       323 ~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          323 DPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999999874


No 233
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.1e-45  Score=353.77  Aligned_cols=250  Identities=25%  Similarity=0.288  Sum_probs=204.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHh--cCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSA--LACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~--l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.+.  ++.||||.+.......+.+|.++++.  ++||||+++++++.........+++|||
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  120 (342)
T 1b6c_B           43 TIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD  120 (342)
T ss_dssp             HCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEEC
T ss_pred             cEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEe
Confidence            4899999999999999999984  89999999987777788899999998  6999999999998766533233679999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLH--------SNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH--------~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      |+++|+|.+++.+. .+++..+..++.||+.||.|||        ++||+||||||+|||++.++.  +||+|||++...
T Consensus       121 ~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~  197 (342)
T 1b6c_B          121 YHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRH  197 (342)
T ss_dssp             CCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC--EEECCCTTCEEE
T ss_pred             ecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC--EEEEECCCceec
Confidence            99999999999865 5999999999999999999999        899999999999999987765  999999999876


Q ss_pred             cccCCC---CCCccccCCcccChhhhcCCC------CCCCCChHHHHHHHHHHHhC----------CCCCCCCC----Ch
Q 040569          152 RVNEDD---EGKPICGTPICMAPEVARGEE------QGFPADVWALGCTVLEMATG----------RPPWPDVA----DP  208 (385)
Q Consensus       152 ~~~~~~---~~~~~~Gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~elltG----------~~Pf~~~~----~~  208 (385)
                      ......   ......||+.|+|||++.+..      ++.++|||||||++|+|++|          +.||....    ..
T Consensus       198 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~  277 (342)
T 1b6c_B          198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  277 (342)
T ss_dssp             ETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccH
Confidence            433221   234557999999999998763      33689999999999999999          78886542    12


Q ss_pred             HHHHHHhcCCCCCCCCCC-----cCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          209 ISALHRIGFSSDTPEIPG-----YMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~-----~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ......+......+.++.     ..++.+.+||.+||+.||.+|||+.|+++|
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            222233322333344443     234679999999999999999999999986


No 234
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.5e-45  Score=346.76  Aligned_cols=247  Identities=24%  Similarity=0.365  Sum_probs=197.8

Q ss_pred             CceeeceeeccCceEEEEEEECC-CCc--EEEEEeccCCC------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNR-SSE--VFAVKSAELSN------SEFLQREQRILSALACPQIVAYKGCDISEENGKI   72 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~-~~~--~~AvK~~~~~~------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~   72 (385)
                      +|++++.||+|+||+||+|+++. +++  .||+|.+....      .+.+.+|++++++++||||+++++++....    
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----   94 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP----   94 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred             HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC----
Confidence            58999999999999999998643 333  68999886431      356789999999999999999999876532    


Q ss_pred             EEEEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           73 LYNLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        73 ~~~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                       .++||||+++++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++...
T Consensus        95 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~--~kl~Dfg~~~~~  171 (291)
T 1u46_A           95 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRAL  171 (291)
T ss_dssp             -CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE--EEECCCTTCEEC
T ss_pred             -ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCC--EEEccccccccc
Confidence             4589999999999999974 456999999999999999999999999999999999999987765  999999999876


Q ss_pred             cccCCC--CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcC
Q 040569          152 RVNEDD--EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYM  228 (385)
Q Consensus       152 ~~~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (385)
                      ......  ......||+.|+|||++.+..++.++|||||||++|+|++ |+.||... +.......+......+..+..+
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~  250 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLPRPEDC  250 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTSCCCCCCCTTC
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-CHHHHHHHHHccCCCCCCCcCc
Confidence            432211  1233457889999999998889999999999999999999 99999875 4444445554444445566778


Q ss_pred             CHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          229 SKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       229 s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ++++.++|.+||..||.+|||+.+++++
T Consensus       251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          251 PQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999999999999973


No 235
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.2e-45  Score=352.58  Aligned_cols=250  Identities=24%  Similarity=0.336  Sum_probs=202.9

Q ss_pred             CceeeceeeccCceEEEEEE----ECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGM----SNRSSEVFAVKSAELSN---SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~----~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+    +..+++.||||.+....   .+.+.+|+++|++++||||+++++++.......  +
T Consensus        42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--~  119 (326)
T 2w1i_A           42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN--L  119 (326)
T ss_dssp             GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C--C
T ss_pred             HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc--e
Confidence            48899999999999999998    46789999999987644   346789999999999999999999876544222  5


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||++.....
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~--~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQ  197 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE--EEECCCTTCEECCS
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCc--EEEecCcchhhccc
Confidence            689999999999999985 456999999999999999999999999999999999999987766  99999999987643


Q ss_pred             cCCC--CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChH--------------HHHHHhcC
Q 040569          154 NEDD--EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPI--------------SALHRIGF  217 (385)
Q Consensus       154 ~~~~--~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--------------~~~~~~~~  217 (385)
                      ....  ......|++.|+|||++.+..++.++|||||||++|+|++|..||.......              ..+.....
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK  277 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred             cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence            2211  1233457888999999998889999999999999999999999985321000              01111111


Q ss_pred             CCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          218 SSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       218 ~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ....+..+..+++++.+||.+||..||.+|||+.|+++
T Consensus       278 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          278 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            22234456778999999999999999999999999986


No 236
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.9e-45  Score=351.29  Aligned_cols=249  Identities=22%  Similarity=0.285  Sum_probs=185.7

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcC-CCCeeeeeeeeeec----cCCeEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALA-CPQIVAYKGCDISE----ENGKIL   73 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~-hpnIv~~~~~~~~~----~~~~~~   73 (385)
                      +|++.+.||+|+||+||+|+++.+++.||||.+....   .+.+.+|+.+++++. ||||+++++++...    ......
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~  108 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE  108 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence            5899999999999999999999999999999885544   346778999999995 99999999987432    123344


Q ss_pred             EEEEEeecCCCCHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCCEEeecCCCCCeEEeecCce
Q 040569           74 YNLFLEYAPGGTLTDAIRS---GTCLEEGRIRSHTRAVLLGLQYLHSNG--IVHCDIKGQNILVSKDNEQGAKIADFGCA  148 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~---~~~l~e~~~~~i~~qil~gL~yLH~~g--ivHrDlKp~NILi~~~~~~~~kL~DFG~a  148 (385)
                      ++++|||+. |+|.+++..   .+.+++..+..++.||+.||.|||++|  |+||||||+|||++.++.  +||+|||++
T Consensus       109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~--~kl~Dfg~~  185 (337)
T 3ll6_A          109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT--IKLCDFGSA  185 (337)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSC--EEBCCCTTC
T ss_pred             EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCC--EEEecCccc
Confidence            679999996 699998863   567999999999999999999999999  999999999999987765  999999999


Q ss_pred             eeecccCCC-----------CCCccccCCcccChhhh---cCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHH
Q 040569          149 RRARVNEDD-----------EGKPICGTPICMAPEVA---RGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHR  214 (385)
Q Consensus       149 ~~~~~~~~~-----------~~~~~~Gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~  214 (385)
                      +........           ......||+.|+|||++   .+..++.++|||||||++|+|++|+.||...... .....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~  264 (337)
T 3ll6_A          186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-RIVNG  264 (337)
T ss_dssp             BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred             eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-HhhcC
Confidence            876432211           11245699999999998   5667888999999999999999999999754221 11111


Q ss_pred             hcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCcc
Q 040569          215 IGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGF  258 (385)
Q Consensus       215 ~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~  258 (385)
                          ......+...++.+.+||.+||+.||.+|||+.|+++|..
T Consensus       265 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          265 ----KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             -----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ----cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence                1112223456788999999999999999999999998743


No 237
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=3.3e-47  Score=359.79  Aligned_cols=249  Identities=25%  Similarity=0.296  Sum_probs=187.6

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHh--cCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSA--LACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~--l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|+++  ++.||||.+.......+.+|.+++..  ++||||+++++++.........+++|||
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   81 (303)
T 3gxj_A            4 TIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             eeeehhhccCCCCeEEEEEEEc--CcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence            5899999999999999999864  89999999988778888889999988  7999999999998776654445779999


Q ss_pred             ecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569           80 YAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLH--------SNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus        80 y~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH--------~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      |+++|+|.++++.. .+++..+..++.|++.||.|||        ++||+||||||+|||++.++.  +||+|||+++..
T Consensus        82 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~--~kl~DFg~a~~~  158 (303)
T 3gxj_A           82 YHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRH  158 (303)
T ss_dssp             CCTTCCHHHHHHHC-CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCC--C-BCCCCC-CCE
T ss_pred             ccCCCCHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCC--EEEeecCcceec
Confidence            99999999999865 5899999999999999999999        999999999999999987765  999999999766


Q ss_pred             cccCCC---CCCccccCCcccChhhhcCC------CCCCCCChHHHHHHHHHHHhC----------CCCCCCCCC----h
Q 040569          152 RVNEDD---EGKPICGTPICMAPEVARGE------EQGFPADVWALGCTVLEMATG----------RPPWPDVAD----P  208 (385)
Q Consensus       152 ~~~~~~---~~~~~~Gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltG----------~~Pf~~~~~----~  208 (385)
                      ......   ......||+.|+|||++.+.      .++.++|||||||++|||++|          +.||.....    .
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~  238 (303)
T 3gxj_A          159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCC
T ss_pred             cCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccH
Confidence            433221   12344799999999999876      344689999999999999999          777754311    1


Q ss_pred             HHHHHHhcCCCCCCCCCC-----cCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          209 ISALHRIGFSSDTPEIPG-----YMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~-----~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ......+......+.++.     ..++.+.+|+.+||+.||.+|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             C-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            111122222223333333     23457999999999999999999999987


No 238
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=2.2e-44  Score=341.46  Aligned_cols=235  Identities=24%  Similarity=0.385  Sum_probs=189.9

Q ss_pred             Cceee-ceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHH-HhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRG-QTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRIL-SALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~-~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il-~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|.+. +.||+|+||+||+|.++.+++.||+|.+..  .....+|+.++ +.+.||||+++++++.....+...+++|||
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            46676 789999999999999999999999999864  45677899998 555999999999998764444555789999


Q ss_pred             ecCCCCHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCC-CCCeEEeecCceeeecccCC
Q 040569           80 YAPGGTLTDAIRSG--TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDN-EQGAKIADFGCARRARVNED  156 (385)
Q Consensus        80 y~~ggsL~~~l~~~--~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~-~~~~kL~DFG~a~~~~~~~~  156 (385)
                      |++||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++ ...+||+|||++....    
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~----  171 (299)
T 3m2w_A           96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT----  171 (299)
T ss_dssp             CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence            99999999999854  3699999999999999999999999999999999999998732 2348999999997642    


Q ss_pred             CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHh--cCCCCCCCCC----CcCCH
Q 040569          157 DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRI--GFSSDTPEIP----GYMSK  230 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~--~~~~~~~~~~----~~~s~  230 (385)
                                         +..++.++|||||||++|+|++|+.||....... .....  .........+    ..+++
T Consensus       172 -------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          172 -------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSE  231 (299)
T ss_dssp             -------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCH
T ss_pred             -------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCH
Confidence                               1346778999999999999999999997542211 11111  1111112222    45799


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHhCcccccc
Q 040569          231 QAQDFLSKCLIRNPGERWSASELLEHGFVKEQ  262 (385)
Q Consensus       231 ~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~  262 (385)
                      ++++||.+||+.||.+|||+.|+|+||||.+.
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence            99999999999999999999999999999764


No 239
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=7.2e-45  Score=345.19  Aligned_cols=245  Identities=24%  Similarity=0.357  Sum_probs=197.0

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-------CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-------NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-------~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      |..++.||+|+||+||+|.+  +++.+|+|.+...       ..+.+.+|+.++++++||||+++++++.....    ++
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~  106 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD----LC  106 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----CE
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCc----eE
Confidence            44569999999999999986  5889999987532       14678899999999999999999998766544    56


Q ss_pred             EEEeecCCCCHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeec
Q 040569           76 LFLEYAPGGTLTDAIR---SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRAR  152 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~---~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~  152 (385)
                      +||||+++|+|.+++.   ....+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~kl~Dfg~~~~~~  184 (307)
T 2nru_A          107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT--AKISDFGLARASE  184 (307)
T ss_dssp             EEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC--EEECCCTTCEECC
T ss_pred             EEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCc--EEEeecccccccc
Confidence            8999999999999997   3456999999999999999999999999999999999999987665  9999999998764


Q ss_pred             ccCCC-CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChH---HHHHHhc---------CCC
Q 040569          153 VNEDD-EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPI---SALHRIG---------FSS  219 (385)
Q Consensus       153 ~~~~~-~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~---------~~~  219 (385)
                      ..... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.......   .....+.         ...
T Consensus       185 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (307)
T 2nru_A          185 KFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK  263 (307)
T ss_dssp             SCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCS
T ss_pred             cccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccc
Confidence            32211 1234579999999999875 47899999999999999999999997543221   1111110         111


Q ss_pred             CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          220 DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       220 ~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      ..+..+...++.+.+++.+||..||.+|||+.+++++
T Consensus       264 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            2223344456789999999999999999999999874


No 240
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=6.6e-45  Score=379.83  Aligned_cols=241  Identities=22%  Similarity=0.332  Sum_probs=199.3

Q ss_pred             eceeeccCceEEEEEEE--CCCCcEEEEEeccCCC-----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEE
Q 040569            6 GQTIGRGSTATVSIGMS--NRSSEVFAVKSAELSN-----SEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFL   78 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~--~~~~~~~AvK~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~   78 (385)
                      .+.||+|+||+||+|.+  +.+++.||||++....     .+.+.+|+++|++++||||+++++++.. ..    +++||
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~----~~lv~  448 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ES----WMLVM  448 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS----EEEEE
T ss_pred             CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CC----EEEEE
Confidence            35799999999999954  5677899999886422     4678899999999999999999998743 22    56999


Q ss_pred             eecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCC--
Q 040569           79 EYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNED--  156 (385)
Q Consensus        79 Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~--  156 (385)
                      ||+++|+|.+++...+.+++..+..++.||+.||+|||++||+||||||+||||+.++.  +||+|||+++.......  
T Consensus       449 E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~--~kL~DFGla~~~~~~~~~~  526 (635)
T 4fl3_A          449 EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY--AKISDFGLSKALRADENYY  526 (635)
T ss_dssp             ECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCTTHHHHTTC-----
T ss_pred             EccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCC--EEEEEcCCccccccCcccc
Confidence            99999999999998888999999999999999999999999999999999999997765  99999999986543222  


Q ss_pred             CCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHH
Q 040569          157 DEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDF  235 (385)
Q Consensus       157 ~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  235 (385)
                      .......||+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+. .......+..+++++.+|
T Consensus       527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~~~~~~i~-~~~~~~~p~~~~~~l~~l  604 (635)
T 4fl3_A          527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-SEVTAMLE-KGERMGCPAGCPREMYDL  604 (635)
T ss_dssp             --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHH-TTCCCCCCTTCCHHHHHH
T ss_pred             ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-cCCCCCCCCCCCHHHHHH
Confidence            12233457889999999999999999999999999999998 9999987533 33333332 334455677899999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHh
Q 040569          236 LSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       236 l~~cL~~dP~~Rps~~elL~  255 (385)
                      |.+||..||.+|||+.++++
T Consensus       605 i~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          605 MNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHH
Confidence            99999999999999999976


No 241
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.3e-44  Score=374.45  Aligned_cols=239  Identities=23%  Similarity=0.337  Sum_probs=196.8

Q ss_pred             eeeccCceEEEEEEEC--CCCcEEEEEeccCC----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEeec
Q 040569            8 TIGRGSTATVSIGMSN--RSSEVFAVKSAELS----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEYA   81 (385)
Q Consensus         8 ~LG~G~~g~Vy~a~~~--~~~~~~AvK~~~~~----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey~   81 (385)
                      .||+|+||+||+|.++  .++..||||.+...    ..+.+.+|+++|++++||||+++++++.. +.    +++||||+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~----~~lv~E~~  417 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA----LMLVMEMA  417 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SS----EEEEEECC
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CC----eEEEEEeC
Confidence            7999999999999875  35677999998653    35778899999999999999999998754 22    66999999


Q ss_pred             CCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCC--
Q 040569           82 PGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDE--  158 (385)
Q Consensus        82 ~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~--  158 (385)
                      ++|+|.+++. ....+++..+..++.||+.||+|||++||+||||||+||||+.++.  +||+|||+++.........  
T Consensus       418 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~--vkL~DFGla~~~~~~~~~~~~  495 (613)
T 2ozo_A          418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY--AKISDFGLSKALGADDSYYTA  495 (613)
T ss_dssp             TTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCCSTTTTCC--------
T ss_pred             CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCc--EEEeeccCcccccCCCceeee
Confidence            9999999997 4456999999999999999999999999999999999999997765  9999999998653322211  


Q ss_pred             CCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHH
Q 040569          159 GKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLS  237 (385)
Q Consensus       159 ~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~  237 (385)
                      .....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+. .......|..+++++.+||.
T Consensus       496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-~~~~~i~-~~~~~~~p~~~~~~l~~li~  573 (613)
T 2ozo_A          496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFIE-QGKRMECPPECPPELYALMS  573 (613)
T ss_dssp             ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-HHHHHHH-TTCCCCCCTTCCHHHHHHHH
T ss_pred             ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHH-cCCCCCCCCcCCHHHHHHHH
Confidence            122346789999999999999999999999999999998 99999876543 3333332 23345567779999999999


Q ss_pred             HhhhcCCCCCCCHHHHHh
Q 040569          238 KCLIRNPGERWSASELLE  255 (385)
Q Consensus       238 ~cL~~dP~~Rps~~elL~  255 (385)
                      +||..||.+|||+.++++
T Consensus       574 ~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          574 DCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HTTCSSTTTSCCHHHHHH
T ss_pred             HHcCCChhHCcCHHHHHH
Confidence            999999999999999864


No 242
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=5.4e-45  Score=373.55  Aligned_cols=244  Identities=24%  Similarity=0.357  Sum_probs=203.8

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC--CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEe
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS--NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~--~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      +|++.+.||+|+||+||+|.++. +..||||.+...  ..+.+.+|+++|++++||||+++++++.. ..    ++||||
T Consensus       268 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~----~~lv~e  341 (535)
T 2h8h_A          268 SLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP----IYIVTE  341 (535)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS----CEEEEC
T ss_pred             hhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-cc----ceEeee
Confidence            47889999999999999999975 467999998753  35778899999999999999999998754 22    568999


Q ss_pred             ecCCCCHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCC
Q 040569           80 YAPGGTLTDAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDD  157 (385)
Q Consensus        80 y~~ggsL~~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~  157 (385)
                      |+++|+|.++++.  +..+++..+..++.||+.||+|||++||+||||||+||||+.++.  +||+|||+++........
T Consensus       342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~--~kl~DFG~a~~~~~~~~~  419 (535)
T 2h8h_A          342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYT  419 (535)
T ss_dssp             CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC--EEECCTTSTTTCCCHHHH
T ss_pred             hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCc--EEEcccccceecCCCcee
Confidence            9999999999973  456999999999999999999999999999999999999987665  999999999865322111


Q ss_pred             CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHH
Q 040569          158 EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFL  236 (385)
Q Consensus       158 ~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll  236 (385)
                      ......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ....+..+. .......+..+++++.+||
T Consensus       420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-~~~~~~~i~-~~~~~~~~~~~~~~l~~li  497 (535)
T 2h8h_A          420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQVE-RGYRMPCPPECPESLHDLM  497 (535)
T ss_dssp             TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-HHHHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred             cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHH-cCCCCCCCCCCCHHHHHHH
Confidence            2233457889999999999999999999999999999999 999998753 333333332 2233445667899999999


Q ss_pred             HHhhhcCCCCCCCHHHHHh
Q 040569          237 SKCLIRNPGERWSASELLE  255 (385)
Q Consensus       237 ~~cL~~dP~~Rps~~elL~  255 (385)
                      .+||+.||.+|||+.++++
T Consensus       498 ~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          498 CQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHH
Confidence            9999999999999999986


No 243
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=3.1e-44  Score=363.14  Aligned_cols=248  Identities=21%  Similarity=0.288  Sum_probs=198.2

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEEEEee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      +|++++.||+|+||+||+|++..+++.||||++... ....+.+|+++++.|.|++++..+..+.....   ..+|||||
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~---~~~lvme~   84 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGD---YNVLVMDL   84 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETT---EEEEEEEC
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC---EEEEEEEC
Confidence            599999999999999999999999999999987643 33567899999999987554444333333222   25699999


Q ss_pred             cCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEee---cCCCCCeEEeecCceeeecccCC
Q 040569           81 APGGTLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVS---KDNEQGAKIADFGCARRARVNED  156 (385)
Q Consensus        81 ~~ggsL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~---~~~~~~~kL~DFG~a~~~~~~~~  156 (385)
                      + +++|.+++. ..+.+++..+..++.||+.||+|||++||+||||||+||||+   .++.  +||+|||+++.......
T Consensus        85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~--vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTC--EEECCCTTCEECBCTTT
T ss_pred             C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCe--EEEEeCCcceeccCCcc
Confidence            9 899999998 366799999999999999999999999999999999999994   4444  99999999987653322


Q ss_pred             C------CCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHh---cCCCCCCCCC
Q 040569          157 D------EGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVAD--PISALHRI---GFSSDTPEIP  225 (385)
Q Consensus       157 ~------~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--~~~~~~~~---~~~~~~~~~~  225 (385)
                      .      .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.....  ....+..+   ........++
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~  241 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALC  241 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHH
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHh
Confidence            1      12356799999999999999999999999999999999999999986533  12222211   1111222233


Q ss_pred             CcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          226 GYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       226 ~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ..+++++.+||.+||..+|.+||++.++++
T Consensus       242 ~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          242 RGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             TTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            457899999999999999999999998765


No 244
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=345.14  Aligned_cols=243  Identities=23%  Similarity=0.335  Sum_probs=196.5

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCC-----CHHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-----NSEFLQREQRILSALACPQIVAYKGCDISEENGKILYNL   76 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-----~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~l   76 (385)
                      +|++++.||+|+||+||+|.++.   .+|+|.+...     ..+.+.+|+.++++++||||+++++++.....    +++
T Consensus        34 ~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~i  106 (319)
T 2y4i_B           34 QLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH----LAI  106 (319)
T ss_dssp             CEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC----EEE
T ss_pred             HeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc----eEE
Confidence            58899999999999999999864   4899987643     23456789999999999999999999876554    679


Q ss_pred             EEeecCCCCHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           77 FLEYAPGGTLTDAIRSG-TCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~-~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      ||||++|++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++ ++  .+||+|||+++......
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~--~~~l~Dfg~~~~~~~~~  183 (319)
T 2y4i_B          107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NG--KVVITDFGLFSISGVLQ  183 (319)
T ss_dssp             ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----CCEECCCSCCC------
T ss_pred             EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CC--CEEEeecCCcccccccc
Confidence            99999999999999854 4799999999999999999999999999999999999997 33  49999999987543211


Q ss_pred             ----CCCCCccccCCcccChhhhcC---------CCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCC
Q 040569          156 ----DDEGKPICGTPICMAPEVARG---------EEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTP  222 (385)
Q Consensus       156 ----~~~~~~~~Gt~~y~aPE~~~~---------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  222 (385)
                          ........||+.|+|||++.+         ..++.++|||||||++|+|++|+.||... ........+.......
T Consensus       184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~  262 (319)
T 2y4i_B          184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-PAEAIIWQMGTGMKPN  262 (319)
T ss_dssp             ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-CHHHHHHHHHTTCCCC
T ss_pred             ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHhccCCCCC
Confidence                122334569999999999975         34688999999999999999999999764 3334444443333333


Q ss_pred             CCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHh
Q 040569          223 EIPGYMSKQAQDFLSKCLIRNPGERWSASELLE  255 (385)
Q Consensus       223 ~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~  255 (385)
                      ..+..+++++.+||.+||..||.+|||+.++++
T Consensus       263 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          263 LSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            334468899999999999999999999999987


No 245
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.7e-46  Score=360.39  Aligned_cols=244  Identities=18%  Similarity=0.201  Sum_probs=188.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------HHHHHHHHHHHHhcC---------CCCeeeee
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------SEFLQREQRILSALA---------CPQIVAYK   61 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------~~~~~~E~~il~~l~---------hpnIv~~~   61 (385)
                      +|++++.||+|+||+||+|++  +|+.||||.+....           .+.+.+|+.+|+.++         ||||+++.
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           21 KLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            488899999999999999998  68999999986542           277889999999986         66666666


Q ss_pred             eeeeecc--------------------------CCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Q 040569           62 GCDISEE--------------------------NGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYL  115 (385)
Q Consensus        62 ~~~~~~~--------------------------~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yL  115 (385)
                      +++....                          .....++|||||+++|++.+.+.+ +.+++..++.++.||+.||+||
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~l  177 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVA  177 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHH
Confidence            5543110                          001126799999999987777654 5689999999999999999999


Q ss_pred             H-HCCceeccCCCCCEEeecCCC------------------CCeEEeecCceeeecccCCCCCCccccCCcccChhhhcC
Q 040569          116 H-SNGIVHCDIKGQNILVSKDNE------------------QGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARG  176 (385)
Q Consensus       116 H-~~givHrDlKp~NILi~~~~~------------------~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~  176 (385)
                      | ++||+||||||+|||++.++.                  ..+||+|||+|+....      ...+||+.|||||++.+
T Consensus       178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE~~~g  251 (336)
T 2vuw_A          178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMDEDLFTG  251 (336)
T ss_dssp             HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTCSGGGCC
T ss_pred             HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccChhhhcC
Confidence            9 999999999999999987751                  1489999999997642      24589999999999987


Q ss_pred             CCCCCCCChHHHHHH-HHHHHhCCCCCCCCCC---hHHHHH-HhcCCC-CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCH
Q 040569          177 EEQGFPADVWALGCT-VLEMATGRPPWPDVAD---PISALH-RIGFSS-DTPEIPGYMSKQAQDFLSKCLIRNPGERWSA  250 (385)
Q Consensus       177 ~~~~~~~DiwSlG~i-l~elltG~~Pf~~~~~---~~~~~~-~~~~~~-~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~  250 (385)
                      .. +.++||||||++ .+++++|..||.....   ....+. ...... ..+..+..+|+++++||.+||++|     |+
T Consensus       252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa  325 (336)
T 2vuw_A          252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SA  325 (336)
T ss_dssp             CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred             CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence            76 889999998877 7888899999953210   111111 111111 111123347889999999999987     99


Q ss_pred             HHHH-hCcccc
Q 040569          251 SELL-EHGFVK  260 (385)
Q Consensus       251 ~elL-~hp~~~  260 (385)
                      +|+| +||||+
T Consensus       326 ~e~l~~Hp~f~  336 (336)
T 2vuw_A          326 TDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHCGGGC
T ss_pred             HHHHhcCCCcC
Confidence            9999 999984


No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=2.8e-45  Score=380.91  Aligned_cols=260  Identities=24%  Similarity=0.354  Sum_probs=205.4

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC--CeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEEN--GKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|+++.+|+.||||.+....    .+.+.+|+++|++++||||+++++++.....  .....+
T Consensus        15 rY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~   94 (676)
T 3qa8_A           15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL   94 (676)
T ss_dssp             --CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred             CeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEE
Confidence            5899999999999999999999999999999886532    3567789999999999999999988644110  011256


Q ss_pred             EEEeecCCCCHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCC-eEEeecCceeee
Q 040569           76 LFLEYAPGGTLTDAIRSGT---CLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQG-AKIADFGCARRA  151 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~---~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~-~kL~DFG~a~~~  151 (385)
                      +||||++||+|.+++....   .+++..++.++.||+.||+|||++||+||||||+|||++.++... +||+|||++...
T Consensus        95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~  174 (676)
T 3qa8_A           95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL  174 (676)
T ss_dssp             CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred             EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence            8999999999999998533   599999999999999999999999999999999999998765433 699999999876


Q ss_pred             cccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHH--------Hh--------
Q 040569          152 RVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALH--------RI--------  215 (385)
Q Consensus       152 ~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~--------~~--------  215 (385)
                      ...  .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........        .+        
T Consensus       175 ~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g  252 (676)
T 3qa8_A          175 DQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG  252 (676)
T ss_dssp             TSC--CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSS
T ss_pred             ccc--cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcc
Confidence            422  233456799999999999999999999999999999999999999965322111000        00        


Q ss_pred             --cCCC---CCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          216 --GFSS---DTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       216 --~~~~---~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                        .+..   ....++..+++.+.+||.+||..||.+|||+.|+|+||||....
T Consensus       253 ~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             SCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred             ccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHH
Confidence              0000   01123334678999999999999999999999999999998754


No 247
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6.6e-44  Score=373.54  Aligned_cols=246  Identities=23%  Similarity=0.303  Sum_probs=201.5

Q ss_pred             CceeeceeeccCceEEEEEEECCC---CcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRS---SEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEENGKILY   74 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~---~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~   74 (385)
                      +|++++.||+|+||+||+|+++.+   +..+|+|.+....    .+.+.+|+.+|++++||||+++++++.. ..    +
T Consensus       391 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~----~  465 (656)
T 2j0j_A          391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP----V  465 (656)
T ss_dssp             GEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS----C
T ss_pred             cEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc----e
Confidence            478899999999999999998654   5679999886533    2567789999999999999999998733 22    5


Q ss_pred             EEEEeecCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           75 NLFLEYAPGGTLTDAIRS-GTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        75 ~lv~Ey~~ggsL~~~l~~-~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      ++||||+++|+|.++++. +..+++..+..++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus       466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~--vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMED  543 (656)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--EEECCCCCCCSCCC
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCC--EEEEecCCCeecCC
Confidence            689999999999999984 446999999999999999999999999999999999999998766  99999999987643


Q ss_pred             cCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHH
Q 040569          154 NEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMAT-GRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQA  232 (385)
Q Consensus       154 ~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  232 (385)
                      ..........||+.|||||++.+..++.++|||||||++|||++ |..||.... .......+.. ...+..+..+++.+
T Consensus       544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-~~~~~~~i~~-~~~~~~~~~~~~~l  621 (656)
T 2j0j_A          544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIEN-GERLPMPPNCPPTL  621 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-HHHHHHHHHH-TCCCCCCTTCCHHH
T ss_pred             CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHc-CCCCCCCccccHHH
Confidence            33323334467889999999998999999999999999999997 999998753 3333333322 23445677799999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          233 QDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       233 ~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      .+||.+||..||.+|||+.++++.
T Consensus       622 ~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          622 YSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999999999863


No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.7e-44  Score=358.41  Aligned_cols=246  Identities=17%  Similarity=0.154  Sum_probs=189.6

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCC------CHHHHHHHHHHHHhcCC-CCeeeee--------------
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS------NSEFLQREQRILSALAC-PQIVAYK--------------   61 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~------~~~~~~~E~~il~~l~h-pnIv~~~--------------   61 (385)
                      |+.++.||+|+||+||+|++..+|+.||||++...      ..+.+++|+.+++.+.| +|+....              
T Consensus        80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  159 (413)
T 3dzo_A           80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  159 (413)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred             EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence            67889999999999999999999999999988732      14678899999999977 3221111              


Q ss_pred             -------eeeeecc-CCeEEEEEEEeecCCCCHHHHHH-------cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 040569           62 -------GCDISEE-NGKILYNLFLEYAPGGTLTDAIR-------SGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIK  126 (385)
Q Consensus        62 -------~~~~~~~-~~~~~~~lv~Ey~~ggsL~~~l~-------~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlK  126 (385)
                             .++.... .....++++|+++ +++|.++++       .+..+++..+..++.||+.||+|||++||+|||||
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiK  238 (413)
T 3dzo_A          160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR  238 (413)
T ss_dssp             CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence                   1011100 0011245677766 579999985       13457888999999999999999999999999999


Q ss_pred             CCCEEeecCCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhh----------cCCCCCCCCChHHHHHHHHHHH
Q 040569          127 GQNILVSKDNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVA----------RGEEQGFPADVWALGCTVLEMA  196 (385)
Q Consensus       127 p~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~----------~~~~~~~~~DiwSlG~il~ell  196 (385)
                      |+||||+.++.  +||+|||+++.....    ....+| +.|||||++          .+..++.++|||||||++|+|+
T Consensus       239 p~NILl~~~~~--~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          239 PVDIVLDQRGG--VFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             GGGEEECTTCC--EEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             cceEEEecCCe--EEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            99999998776  999999999875432    344578 999999999          5556888999999999999999


Q ss_pred             hCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhcCCCCCCCHHHHHhCccccccc
Q 040569          197 TGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIRNPGERWSASELLEHGFVKEQN  263 (385)
Q Consensus       197 tG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~dP~~Rps~~elL~hp~~~~~~  263 (385)
                      +|+.||...... .....+ +.     ....+|+++++||.+||++||.+|||+.|+|+||||+...
T Consensus       312 tg~~Pf~~~~~~-~~~~~~-~~-----~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          312 CADLPNTDDAAL-GGSEWI-FR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  371 (413)
T ss_dssp             HSSCCCCTTGGG-SCSGGG-GS-----SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HCCCCCCCcchh-hhHHHH-Hh-----hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHH
Confidence            999999764221 111111 11     1124789999999999999999999999999999998653


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=7e-43  Score=367.63  Aligned_cols=238  Identities=20%  Similarity=0.296  Sum_probs=196.3

Q ss_pred             CceeeceeeccCceEEEEEEECC-CCcEEEEEeccCCC----HHHHHHHHHHHHhcCCCCeeeeeeeeeeccC-CeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNR-SSEVFAVKSAELSN----SEFLQREQRILSALACPQIVAYKGCDISEEN-GKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~-~~~~~AvK~~~~~~----~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|.++. +++.||||.+....    .+.+.+|+++|++++||||+++++++..... +...+|
T Consensus        81 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~  160 (681)
T 2pzi_A           81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY  160 (681)
T ss_dssp             TEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeE
Confidence            58999999999999999999976 78999999886432    2456789999999999999999999876543 344457


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      |||||++|++|.+++..  .+++..+..++.||+.||.|||++||+||||||+|||++.+   .+||+|||+++..... 
T Consensus       161 lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~---~~kl~DFG~a~~~~~~-  234 (681)
T 2pzi_A          161 IVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE---QLKLIDLGAVSRINSF-  234 (681)
T ss_dssp             EEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS---CEEECCCTTCEETTCC-
T ss_pred             EEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC---cEEEEecccchhcccC-
Confidence            99999999999998775  69999999999999999999999999999999999999864   4999999999876322 


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCC--CCCcCCHHHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPE--IPGYMSKQAQ  233 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~  233 (385)
                          ...+||+.|||||++.+.. +.++|||||||++|+|++|.+||.....           ...+.  .....++.+.
T Consensus       235 ----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~l~  298 (681)
T 2pzi_A          235 ----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV-----------DGLPEDDPVLKTYDSYG  298 (681)
T ss_dssp             ----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-----------SSCCTTCHHHHHCHHHH
T ss_pred             ----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-----------ccccccccccccCHHHH
Confidence                4457999999999997654 8899999999999999999999864210           01111  0112467899


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCccccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVKE  261 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~~  261 (385)
                      +||.+||++||.+||+..+.+.|+|...
T Consensus       299 ~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          299 RLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            9999999999999999999999998753


No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.7e-42  Score=325.18  Aligned_cols=218  Identities=14%  Similarity=0.098  Sum_probs=178.0

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN------SEFLQREQRILSALACPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      +|++.+.||+|+||+||+|++..+++.||||.+....      .+.+.+|+.++++++||||+++++++.....    ++
T Consensus        32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~----~~  107 (286)
T 3uqc_A           32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAG----GL  107 (286)
T ss_dssp             TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE----EE
T ss_pred             cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCc----EE
Confidence            4999999999999999999999999999999987542      1567899999999999999999998866533    67


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecccC
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNE  155 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~  155 (385)
                      +||||++|++|.++++.+  ..+..+..++.||+.||+|||++||+||||||+|||++.++.  +||+++          
T Consensus       108 lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~--~kl~~~----------  173 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGD--VVLAYP----------  173 (286)
T ss_dssp             EEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSC--EEECSC----------
T ss_pred             EEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCC--EEEEec----------
Confidence            999999999999999754  466678999999999999999999999999999999997766  888743          


Q ss_pred             CCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhc-CCCCCC---CCCCcCCHH
Q 040569          156 DDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIG-FSSDTP---EIPGYMSKQ  231 (385)
Q Consensus       156 ~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-~~~~~~---~~~~~~s~~  231 (385)
                                 .|++|       ++.++|||||||++|+|++|+.||.............. .....+   ..+..++++
T Consensus       174 -----------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T 3uqc_A          174 -----------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQ  235 (286)
T ss_dssp             -----------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred             -----------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHH
Confidence                       34443       67899999999999999999999986432110000000 011111   233568999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHhC
Q 040569          232 AQDFLSKCLIRNPGERWSASELLEH  256 (385)
Q Consensus       232 ~~~ll~~cL~~dP~~Rps~~elL~h  256 (385)
                      +++||.+||++||.+| |+.|+++.
T Consensus       236 l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          236 ISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHHHHHHHcccCCccC-CHHHHHHH
Confidence            9999999999999999 99999873


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=100.00  E-value=5.7e-35  Score=300.97  Aligned_cols=226  Identities=14%  Similarity=0.093  Sum_probs=154.7

Q ss_pred             eeeccCceEEEEEEECCCCcEEEEEeccCCC-------------HHHHHHHHHHHHhc-CCCCeeeeeeeeeeccCCeEE
Q 040569            8 TIGRGSTATVSIGMSNRSSEVFAVKSAELSN-------------SEFLQREQRILSAL-ACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         8 ~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-------------~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      .++.|+.|.+..++..-.|+.||+|.+.+..             .+.+++|+++|+++ .|+||+++++++.+...    
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~----  316 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS----  316 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE----
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE----
Confidence            3567888888888888889999999886431             24688999999999 79999999998866544    


Q ss_pred             EEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           74 YNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      +||||||++|++|.++|+.++++++.   .|++||+.||+|||++|||||||||+||||+.++.  +||+|||+|+....
T Consensus       317 ~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~--vKL~DFGlAr~~~~  391 (569)
T 4azs_A          317 GWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQH--ARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSC--EEECCCTTEESCC-
T ss_pred             EEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCC--EEEeecccCeeCCC
Confidence            77999999999999999988888875   47899999999999999999999999999988776  99999999987643


Q ss_pred             cCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHH
Q 040569          154 NEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQ  233 (385)
Q Consensus       154 ~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  233 (385)
                      .. ....+.+||+.|||||++.+. +..++|+||+|+++++|.++..|+.      ..+.    .....      ...+.
T Consensus       392 ~~-~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~~------~~l~----~~~~~------~~~~~  453 (569)
T 4azs_A          392 DC-SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNWL------YAVW----QEPVE------RWNFV  453 (569)
T ss_dssp             ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHHH------HHHH----TSCGG------GCSHH
T ss_pred             CC-ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchhH------HHhh----cCCCC------CCcHH
Confidence            32 234567899999999999764 6778999999999998877654431      1111    11000      01245


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHhCcccc
Q 040569          234 DFLSKCLIRNPGERWSASELLEHGFVK  260 (385)
Q Consensus       234 ~ll~~cL~~dP~~Rps~~elL~hp~~~  260 (385)
                      .+...+...+|..|+.......++|..
T Consensus       454 ~l~~~l~~~~~~~~~~~~~~~~~~~~~  480 (569)
T 4azs_A          454 LLLALFEKKAKLPSAEQQRGATEQWII  480 (569)
T ss_dssp             HHHHHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCChhhhccchhHH
Confidence            677777788888888776666666654


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.96  E-value=1.5e-30  Score=266.53  Aligned_cols=181  Identities=20%  Similarity=0.219  Sum_probs=141.0

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------HHHHHHHHHHHHhcCCCCeeeeeeeeeeccCCeEE
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------SEFLQREQRILSALACPQIVAYKGCDISEENGKIL   73 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~~   73 (385)
                      ..+.||+|+||+||+|.  ..++.+++|......           .+.+.+|+++|++++||||+++..++.....    
T Consensus       340 ~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~----  413 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN----  413 (540)
T ss_dssp             --------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT----
T ss_pred             CCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc----
Confidence            35789999999999994  457888988753221           2346899999999999999965555554444    


Q ss_pred             EEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeEEeecCceeeecc
Q 040569           74 YNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARV  153 (385)
Q Consensus        74 ~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~  153 (385)
                      .+|||||++|++|.++++.        +..++.||+.||+|||++||+||||||+|||++.    .+||+|||+++....
T Consensus       414 ~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~  481 (540)
T 3en9_A          414 KRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNL  481 (540)
T ss_dssp             TEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS----SEEECCCTTCEECCC
T ss_pred             cEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC----eEEEEECccCEECCC
Confidence            4689999999999999886        6689999999999999999999999999999986    499999999998643


Q ss_pred             cCCCC------CCccccCCcccChhhhcC--CCCCCCCChHHHHHHHHHHHhCCCCCC
Q 040569          154 NEDDE------GKPICGTPICMAPEVARG--EEQGFPADVWALGCTVLEMATGRPPWP  203 (385)
Q Consensus       154 ~~~~~------~~~~~Gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~Pf~  203 (385)
                      .....      ....+||+.|||||++..  ..|+..+|+||..+-..+.+.++.+|.
T Consensus       482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            21111      135689999999999987  567788999999999999988887763


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.94  E-value=1e-26  Score=219.12  Aligned_cols=153  Identities=20%  Similarity=0.156  Sum_probs=122.5

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---------------------HHHHHHHHHHHHhcCCCCeeeee
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---------------------SEFLQREQRILSALACPQIVAYK   61 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---------------------~~~~~~E~~il~~l~hpnIv~~~   61 (385)
                      |.+++.||+|+||.||+|.+ .+|+.+|+|.+....                     ...+.+|+.+|++++  | +++.
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~  167 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP  167 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred             EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence            55679999999999999999 889999999886422                     245789999999999  4 5555


Q ss_pred             eeeeeccCCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCCCCeE
Q 040569           62 GCDISEENGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNEQGAK  141 (385)
Q Consensus        62 ~~~~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~~~~k  141 (385)
                      +++.. ..    .++||||++||+|.+ +..      .....++.||+.||.|||++||+||||||+|||++ ++.  +|
T Consensus       168 ~~~~~-~~----~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~--vk  232 (282)
T 1zar_A          168 KVYAW-EG----NAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEG--IW  232 (282)
T ss_dssp             CEEEE-ET----TEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTE--EE
T ss_pred             eEEec-cc----eEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCc--EE
Confidence            54432 22    468999999999998 432      23557999999999999999999999999999999 555  99


Q ss_pred             EeecCceeeecccCCCCCCccccCCcccChhhhcC----------CCCCCCCChHHH
Q 040569          142 IADFGCARRARVNEDDEGKPICGTPICMAPEVARG----------EEQGFPADVWAL  188 (385)
Q Consensus       142 L~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~----------~~~~~~~DiwSl  188 (385)
                      |+|||+|+.              +..++|||++.+          ..++..+|+|.+
T Consensus       233 l~DFG~a~~--------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~  275 (282)
T 1zar_A          233 IIDFPQSVE--------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA  275 (282)
T ss_dssp             ECCCTTCEE--------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred             EEECCCCeE--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence            999999974              445899999864          346677777754


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.88  E-value=1.1e-22  Score=188.94  Aligned_cols=134  Identities=22%  Similarity=0.196  Sum_probs=106.5

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcE--EEEEeccCCCH---------------------------HHHHHHHHHHHhcC
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEV--FAVKSAELSNS---------------------------EFLQREQRILSALA   53 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~--~AvK~~~~~~~---------------------------~~~~~E~~il~~l~   53 (385)
                      |.+++.||+|+||.||+|.+..+|+.  ||||++.....                           ..+.+|+.+|+++.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56889999999999999999778999  99998643211                           25778999999998


Q ss_pred             CCCe--eeeeeeeeeccCCeEEEEEEEeecCC-C----CHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccC
Q 040569           54 CPQI--VAYKGCDISEENGKILYNLFLEYAPG-G----TLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLH-SNGIVHCDI  125 (385)
Q Consensus        54 hpnI--v~~~~~~~~~~~~~~~~~lv~Ey~~g-g----sL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH-~~givHrDl  125 (385)
                      |+++  +..+..    ..    .+|||||+.+ |    +|.+....   .++..+..++.||+.||.||| ++||+||||
T Consensus       129 ~~~i~~p~~~~~----~~----~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDl  197 (258)
T 1zth_A          129 EAGVSVPQPYTY----MK----NVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADL  197 (258)
T ss_dssp             HTTCCCCCEEEE----ET----TEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSC
T ss_pred             hCCCCCCeEEEc----CC----CEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence            8764  333321    12    4589999942 3    67776543   346678899999999999999 999999999


Q ss_pred             CCCCEEeecCCCCCeEEeecCceeee
Q 040569          126 KGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus       126 Kp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      ||+|||++.    .++|+|||+|...
T Consensus       198 kp~NILl~~----~~~liDFG~a~~~  219 (258)
T 1zth_A          198 SEYNIMYID----KVYFIDMGQAVTL  219 (258)
T ss_dssp             STTSEEESS----SEEECCCTTCEET
T ss_pred             CHHHEEEcC----cEEEEECcccccC
Confidence            999999985    4999999999764


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.76  E-value=5.2e-19  Score=172.46  Aligned_cols=135  Identities=15%  Similarity=0.170  Sum_probs=99.5

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-----------------HH--------HHHHHHHHHHhcCCCCe
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-----------------SE--------FLQREQRILSALACPQI   57 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-----------------~~--------~~~~E~~il~~l~hpnI   57 (385)
                      |.+++.||+|++|.||+|.+. +|+.+|||++....                 ..        ..++|...|.++.+..+
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            889999999999999999985 69999999764210                 01        12457777877755444


Q ss_pred             eeeeeeeeeccCCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEeecCCC
Q 040569           58 VAYKGCDISEENGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILVSKDNE  137 (385)
Q Consensus        58 v~~~~~~~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi~~~~~  137 (385)
                      ....-+ ....     .+|||||++|++|.++..      ...+..++.||+.+|.|||++|||||||||.|||++.++.
T Consensus       176 ~vp~p~-~~~~-----~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          176 PVPEPI-AQSR-----HTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             SCCCEE-EEET-----TEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred             CCCeee-eccC-----ceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence            221111 1112     248999999998876432      2345678899999999999999999999999999987653


Q ss_pred             C--------CeEEeecCceee
Q 040569          138 Q--------GAKIADFGCARR  150 (385)
Q Consensus       138 ~--------~~kL~DFG~a~~  150 (385)
                      .        .+.|+||+-+..
T Consensus       244 ~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          244 AEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SSCTTSEEEEEEECCCTTCEE
T ss_pred             cccccccccceEEEEeCCccc
Confidence            2        278999997654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.43  E-value=4.9e-13  Score=123.24  Aligned_cols=136  Identities=18%  Similarity=0.161  Sum_probs=105.1

Q ss_pred             CceeeceeeccCceEEEEEEECCCCcEEEEEeccC---CCHHHHHHHHHHHHhcC-CCCeeeeeeeeeeccCCeEEEEEE
Q 040569            2 DWTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAEL---SNSEFLQREQRILSALA-CPQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         2 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~---~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      .|+....++.|+.+.||++...  +..+++|....   .....+++|.++|+.+. +..+++++++....  +.  .++|
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--~~--~~lv   88 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD--GW--SNLL   88 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET--TE--EEEE
T ss_pred             cceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC--Cc--eEEE
Confidence            4777888888999999999754  68999998864   34456889999999994 66677787765543  22  5689


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHS----------------------------------------  117 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~----------------------------------------  117 (385)
                      |||++|.+|.+.+.     +......++.++..+|..||+                                        
T Consensus        89 ~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T 3tm0_A           89 MSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             EECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred             EEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence            99999999987632     222345788999999999998                                        


Q ss_pred             -------------------CCceeccCCCCCEEeecCCCCCeEEeecCceee
Q 040569          118 -------------------NGIVHCDIKGQNILVSKDNEQGAKIADFGCARR  150 (385)
Q Consensus       118 -------------------~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~  150 (385)
                                         ..++|+|++|.|||++.+.  .+.|+||+.+..
T Consensus       164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~--~~~lIDwe~a~~  213 (263)
T 3tm0_A          164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK--VSGFIDLGRSGR  213 (263)
T ss_dssp             SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTE--EEEECCCTTCEE
T ss_pred             CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCc--EEEEEEchhccc
Confidence                               4489999999999997432  146999998764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.31  E-value=3.6e-12  Score=116.54  Aligned_cols=127  Identities=24%  Similarity=0.121  Sum_probs=91.0

Q ss_pred             eccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCC--eeeeeeeeeeccCCeEEEEEEEeecCCCCHH
Q 040569           10 GRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQ--IVAYKGCDISEENGKILYNLFLEYAPGGTLT   87 (385)
Q Consensus        10 G~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpn--Iv~~~~~~~~~~~~~~~~~lv~Ey~~ggsL~   87 (385)
                      +.|..+.||++.. .+|..+++|.........+.+|+.+|+.+.+.+  +++++++......    .++||||++|.+|.
T Consensus        29 ~gg~~~~v~~~~~-~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~----~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSA-QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGR----DWLLLGEVPGQDLL  103 (264)
T ss_dssp             CTTSSCEEEEEEC-TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSC----EEEEEECCSSEETT
T ss_pred             cCCCCceEEEEec-CCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCC----CEEEEEecCCcccC
Confidence            4556699999964 467789999876554456789999999995434  4557666543322    56899999998884


Q ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC------------------------------------------------
Q 040569           88 DAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNG------------------------------------------------  119 (385)
Q Consensus        88 ~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~g------------------------------------------------  119 (385)
                        ...   .+   ...++.++...|..||+..                                                
T Consensus       104 --~~~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  175 (264)
T 1nd4_A          104 --SSH---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK  175 (264)
T ss_dssp             --TSC---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred             --cCc---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence              211   12   2356777778888888643                                                


Q ss_pred             ----------ceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569          120 ----------IVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus       120 ----------ivHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                                ++|+|++|.|||++.++  .+.|+|||.+...
T Consensus       176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~--~~~liD~~~a~~g  215 (264)
T 1nd4_A          176 ARMPDGEDLVVTHGDACLPNIMVENGR--FSGFIDCGRLGVA  215 (264)
T ss_dssp             HTCCSSCCEEEECSSCCGGGEEEETTE--EEEECCCTTCEEE
T ss_pred             HhcCCCCCeEEECCCCCCCcEEEECCc--EEEEEcchhcccC
Confidence                      99999999999997542  1469999988653


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.22  E-value=3.9e-11  Score=115.83  Aligned_cols=141  Identities=15%  Similarity=0.192  Sum_probs=104.0

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEecc--CCC----HHHHHHHHHHHHhcC--CCCeeeeeeeeeeccC-CeEEEE
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAE--LSN----SEFLQREQRILSALA--CPQIVAYKGCDISEEN-GKILYN   75 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~--~~~----~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~-~~~~~~   75 (385)
                      ..+.|+.|.++.||++...  +..+++|...  ...    ...+.+|..+|+.|.  +..+++++.++..... +.  .+
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~--~~  117 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR--AF  117 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS--CE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC--eE
Confidence            4678999999999998764  4678888776  322    356889999999996  3456777766543321 22  34


Q ss_pred             EEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 040569           76 LFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHS--------------------------------------  117 (385)
Q Consensus        76 lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~--------------------------------------  117 (385)
                      +||||++|..+.+..  -..+++.....++.++...|..||+                                      
T Consensus       118 ~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             EEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            799999998875421  2237888889999999999999997                                      


Q ss_pred             --------------------CCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569          118 --------------------NGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus       118 --------------------~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                                          ..++|+|++|.|||++.++...+.|+||+.+...
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                3689999999999998664332589999998753


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.12  E-value=6.8e-11  Score=111.51  Aligned_cols=184  Identities=18%  Similarity=0.136  Sum_probs=121.2

Q ss_pred             eceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhc-CCCC--eeeeeeeeeeccCCeEEEEEEEeec
Q 040569            6 GQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSAL-ACPQ--IVAYKGCDISEENGKILYNLFLEYA   81 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l-~hpn--Iv~~~~~~~~~~~~~~~~~lv~Ey~   81 (385)
                      .+.++.|....||++.     ..+++|..... ....+.+|.++|+.+ .+..  +++.+..... .....+.|+|||++
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~-~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP-SETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC-CSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCC-CCCCCcceEEEccc
Confidence            5678999999999863     46888976533 246788999999988 3322  2333332211 22122345799999


Q ss_pred             CCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------------
Q 040569           82 PGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHS--------------------------------------------  117 (385)
Q Consensus        82 ~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~--------------------------------------------  117 (385)
                      +|.+|.+....  .++..+...++.|+...|..||+                                            
T Consensus        99 ~G~~l~~~~~~--~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  176 (304)
T 3sg8_A           99 KGVPLTPLLLN--NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF  176 (304)
T ss_dssp             CCEECCHHHHH--TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred             CCeECCccccc--cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence            99988764432  37888888899999999999986                                            


Q ss_pred             --------------CCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCCCCccccCCcc---cChhhhcC--CC
Q 040569          118 --------------NGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDEGKPICGTPIC---MAPEVARG--EE  178 (385)
Q Consensus       118 --------------~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y---~aPE~~~~--~~  178 (385)
                                    ..++|+|++|.||+++.+....+.|+||+.+.......+.     .....+   ..|+....  ..
T Consensus       177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~l~~  251 (304)
T 3sg8_A          177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF-----ISLMEDDEEYGMEFVSKILNH  251 (304)
T ss_dssp             HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH-----HTTCCTTTSCCHHHHHHHHHH
T ss_pred             HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH-----HHHHhhccccCHHHHHHHHHH
Confidence                          1369999999999998642223689999998764211100     000111   23333211  01


Q ss_pred             CC------------CCCChHHHHHHHHHHHhCCCCC
Q 040569          179 QG------------FPADVWALGCTVLEMATGRPPW  202 (385)
Q Consensus       179 ~~------------~~~DiwSlG~il~elltG~~Pf  202 (385)
                      |+            ...+.|++|.+++.+.+|..+|
T Consensus       252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            11            1258999999999999998876


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.92  E-value=5.7e-09  Score=99.13  Aligned_cols=132  Identities=20%  Similarity=0.168  Sum_probs=98.3

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCC-HHHHHHHHHHHHhcCC----CCeeeeeeeeeeccCCeEEEEEE
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN-SEFLQREQRILSALAC----PQIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~-~~~~~~E~~il~~l~h----pnIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      ....+.++.|..+.||++     +..+++|...... ...+.+|..+|+.+.+    ..++++++.    ..    .++|
T Consensus        39 i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~----~~lv  105 (320)
T 3r70_A           39 INELRYLSSGDDSDTFLC-----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SD----RFNI  105 (320)
T ss_dssp             CSCEEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CS----SCEE
T ss_pred             eEEEEeCCCCCCceEEEE-----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CC----cEEE
Confidence            456778999999999998     6678999775433 4568899999999965    123344433    22    3489


Q ss_pred             EeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC--------------------------------------
Q 040569           78 LEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNG--------------------------------------  119 (385)
Q Consensus        78 ~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~g--------------------------------------  119 (385)
                      |||++|.++......  .++......++.++...|..||+..                                      
T Consensus       106 me~i~G~~l~~~~~~--~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (320)
T 3r70_A          106 MKYIKGERITYEQYH--KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD  183 (320)
T ss_dssp             EECCCCBCCCHHHHT--TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred             EeecCCccccccccc--cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence            999999998754332  3677778888888888888888532                                      


Q ss_pred             -------------------------ceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569          120 -------------------------IVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus       120 -------------------------ivHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                                               ++|+|++|.|||++.+..  +.|+||+.+...
T Consensus       184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~--~~~iD~~~~~~~  238 (320)
T 3r70_A          184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRL--FGVIDFGDFNVG  238 (320)
T ss_dssp             HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEE--EEECCCTTCEEE
T ss_pred             cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCce--EEEECCcccccC
Confidence                                     399999999999986322  589999998764


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.66  E-value=1.7e-07  Score=88.41  Aligned_cols=137  Identities=15%  Similarity=0.161  Sum_probs=92.5

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcCCC---CeeeeeeeeeeccCCeEEEEEEEee
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALACP---QIVAYKGCDISEENGKILYNLFLEY   80 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~hp---nIv~~~~~~~~~~~~~~~~~lv~Ey   80 (385)
                      ..+.++.|....||+.     +..+++|..... ....+.+|.++|+.|.+.   .+++.+.+... ..+.  .+++|||
T Consensus        23 ~v~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~-~~g~--~~~v~e~   94 (306)
T 3tdw_A           23 SVESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR-SDGN--PFVGYRK   94 (306)
T ss_dssp             CEEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-TTSC--EEEEEEC
T ss_pred             eeeecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-CCCc--eEEEEec
Confidence            3567888999999998     567888885432 235788999999999642   23444444322 2233  3489999


Q ss_pred             cCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC------------------------------------------
Q 040569           81 APGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSN------------------------------------------  118 (385)
Q Consensus        81 ~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~------------------------------------------  118 (385)
                      ++|.+|.+..-.  .+++.....++.++...|..||+.                                          
T Consensus        95 i~G~~l~~~~~~--~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           95 VQGQILGEDGMA--VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             CCSEECHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             cCCeECchhhhh--hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            999888764322  245555666666666666666642                                          


Q ss_pred             ------------------CceeccCCCCCEEeecCC-CCCe-EEeecCceeee
Q 040569          119 ------------------GIVHCDIKGQNILVSKDN-EQGA-KIADFGCARRA  151 (385)
Q Consensus       119 ------------------givHrDlKp~NILi~~~~-~~~~-kL~DFG~a~~~  151 (385)
                                        .++|+|++|.|||++.+. ...+ .|+||+.+...
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                              359999999999998621 1224 89999988764


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.64  E-value=1.9e-07  Score=85.87  Aligned_cols=134  Identities=17%  Similarity=0.092  Sum_probs=92.1

Q ss_pred             eeeccCce-EEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcC-CCCeeeeeeeeeeccCCeEEEEEEEeecCCCC
Q 040569            8 TIGRGSTA-TVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALA-CPQIVAYKGCDISEENGKILYNLFLEYAPGGT   85 (385)
Q Consensus         8 ~LG~G~~g-~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~~~~lv~Ey~~ggs   85 (385)
                      .+..|..+ .||+......+..+++|.........+.+|..+|+.|. +--+.+.+.+....+  .  .++|||+++|.+
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~--~~lvme~l~G~~  106 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--D--AWLLTTAIPGKT  106 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--E--EEEEEECCCSEE
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--e--EEEEEEeeCCcc
Confidence            45556555 79998887778889999887666778899999999884 222445555544332  2  458999999988


Q ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC-----------------------------------------------
Q 040569           86 LTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSN-----------------------------------------------  118 (385)
Q Consensus        86 L~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~-----------------------------------------------  118 (385)
                      +.+.....    ......+..++...|.-||+.                                               
T Consensus       107 ~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          107 AFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             HHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             ccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            87765432    122334555555666666531                                               


Q ss_pred             -----------CceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569          119 -----------GIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus       119 -----------givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                                 .++|+|+.|.|||++.++-  +-|+||+.+...
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~--~~viDwe~a~~g  224 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKL--IGCIDVGRVGIA  224 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETTEE--EEECCCTTCEEE
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECCeE--EEEEECcccccC
Confidence                       1689999999999985431  469999988653


No 263
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.45  E-value=1.8e-06  Score=80.71  Aligned_cols=74  Identities=14%  Similarity=0.052  Sum_probs=56.8

Q ss_pred             eeeceeeccCceEEEEEEECCCCcEEEEEeccCCC---HHHHHHHHHHHHhcCCC---CeeeeeeeeeeccCCeEEEEEE
Q 040569            4 TRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSN---SEFLQREQRILSALACP---QIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~---~~~~~~E~~il~~l~hp---nIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      ...+.||.|.++.||++... +|..++||......   ...+.+|++.|+.|.+.   .+++.+++.    .    .++|
T Consensus        18 ~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~----~~lv   88 (288)
T 3d1u_A           18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----D----RTLA   88 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----T----TEEE
T ss_pred             cceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----C----cEEE
Confidence            45678999999999999763 68889999865332   36789999999999764   466666542    1    3489


Q ss_pred             EeecCCCCH
Q 040569           78 LEYAPGGTL   86 (385)
Q Consensus        78 ~Ey~~ggsL   86 (385)
                      |||++|+++
T Consensus        89 me~l~g~~~   97 (288)
T 3d1u_A           89 MEWVDERPP   97 (288)
T ss_dssp             EECCCCCCC
T ss_pred             EEecccCCC
Confidence            999999874


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.41  E-value=1.4e-06  Score=84.14  Aligned_cols=76  Identities=11%  Similarity=0.033  Sum_probs=53.6

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCC--eeeeeeeeeeccCCeEEEEEEEeecC
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQ--IVAYKGCDISEENGKILYNLFLEYAP   82 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpn--Iv~~~~~~~~~~~~~~~~~lv~Ey~~   82 (385)
                      ..+.|+.|....+|+...  .+..+++|.....  ..+.+|..+|+.|....  +++++....... +.  .++||||++
T Consensus        45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~--~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-g~--~~lv~e~l~  117 (362)
T 3ovc_A           45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA--DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-SL--TYCISRRAQ  117 (362)
T ss_dssp             EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC--HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-SC--EEEEEECCC
T ss_pred             eEEECCCCCcceEEEEEE--CCcEEEEEeCCch--hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-CC--eEEEEEecC
Confidence            467789999999999875  4789999987543  46889999999985433  344544433322 22  458999999


Q ss_pred             CCCHH
Q 040569           83 GGTLT   87 (385)
Q Consensus        83 ggsL~   87 (385)
                      |.+|.
T Consensus       118 G~~l~  122 (362)
T 3ovc_A          118 GVTLQ  122 (362)
T ss_dssp             SEETT
T ss_pred             CCCcc
Confidence            86653


No 265
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.29  E-value=2.8e-06  Score=82.76  Aligned_cols=74  Identities=16%  Similarity=0.028  Sum_probs=48.0

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCC----------CHHHHHHHHHHHHhcCC--CC-eeeeeeeeeeccCCe
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS----------NSEFLQREQRILSALAC--PQ-IVAYKGCDISEENGK   71 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~----------~~~~~~~E~~il~~l~h--pn-Iv~~~~~~~~~~~~~   71 (385)
                      ..+.||.|..+.||++....+++.++||.....          ..+.+.+|.++|+.+..  |. +++++.+  +...  
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~--  109 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEM--  109 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTT--
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCc--
Confidence            356899999999999987666788999975421          12356789999998732  33 3455543  2222  


Q ss_pred             EEEEEEEeecCCC
Q 040569           72 ILYNLFLEYAPGG   84 (385)
Q Consensus        72 ~~~~lv~Ey~~gg   84 (385)
                        .++||||++|.
T Consensus       110 --~~lvmE~l~g~  120 (397)
T 2olc_A          110 --AVTVMEDLSHL  120 (397)
T ss_dssp             --TEEEECCCTTS
T ss_pred             --cEEEEEeCCCc
Confidence              24899999874


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.20  E-value=1.7e-05  Score=74.84  Aligned_cols=77  Identities=17%  Similarity=0.097  Sum_probs=43.6

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcC-----CCCeeeee-eeeeeccCCeEEEEEEE
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALA-----CPQIVAYK-GCDISEENGKILYNLFL   78 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~-----hpnIv~~~-~~~~~~~~~~~~~~lv~   78 (385)
                      ..+.|+.|..+.||++...  +..+++|.... ..+.+..|..+++.|.     .|.++... +.......+.  .+++|
T Consensus        36 ~~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~-~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~--~~~l~  110 (346)
T 2q83_A           36 KIDVIQGNQMALVWKVHTD--SGAVCLKRIHR-PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSF--LFVVY  110 (346)
T ss_dssp             EEEECC----CEEEEEEET--TEEEEEEEECS-CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTE--EEEEE
T ss_pred             EeeeccccccCcEEEEEeC--CCCEEEEecCC-CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCE--EEEEE
Confidence            3456666778999998764  34589998876 3455666777777663     24444311 1111111222  45899


Q ss_pred             eecCCCCH
Q 040569           79 EYAPGGTL   86 (385)
Q Consensus        79 Ey~~ggsL   86 (385)
                      ||++|.++
T Consensus       111 ~~i~G~~~  118 (346)
T 2q83_A          111 DWIEGRPF  118 (346)
T ss_dssp             ECCCCBCC
T ss_pred             EeecCccC
Confidence            99998654


No 267
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14  E-value=2.3e-06  Score=81.96  Aligned_cols=80  Identities=9%  Similarity=0.157  Sum_probs=51.8

Q ss_pred             ecee-eccCceEEEEEEEC--C----CCcEEEEEeccCCC------HHHHHHHHHHHHhcC-C--CCeeeeeeeeeeccC
Q 040569            6 GQTI-GRGSTATVSIGMSN--R----SSEVFAVKSAELSN------SEFLQREQRILSALA-C--PQIVAYKGCDISEEN   69 (385)
Q Consensus         6 ~~~L-G~G~~g~Vy~a~~~--~----~~~~~AvK~~~~~~------~~~~~~E~~il~~l~-h--pnIv~~~~~~~~~~~   69 (385)
                      .+.| +.|..+.+|+....  .    ++..+++|......      ...+.+|..+|+.|. +  -.+++++.+......
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4667 78888999988653  1    25678999765422      246788999999883 2  345666655433210


Q ss_pred             -CeEEEEEEEeecCCCCHH
Q 040569           70 -GKILYNLFLEYAPGGTLT   87 (385)
Q Consensus        70 -~~~~~~lv~Ey~~ggsL~   87 (385)
                       +.  .++||||++|.++.
T Consensus       105 ~g~--~~~v~e~l~G~~l~  121 (357)
T 3ats_A          105 LGT--PFFLMDYVEGVVPP  121 (357)
T ss_dssp             TSS--CEEEEECCCCBCCC
T ss_pred             cCC--ceEEEEecCCCChh
Confidence             22  34799999986653


No 268
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.85  E-value=7.6e-05  Score=66.31  Aligned_cols=121  Identities=12%  Similarity=0.067  Sum_probs=78.5

Q ss_pred             CHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCCEEeecCCCCCeEEeecCceeeecccCCCCCCcc
Q 040569           85 TLTDAIR-SGTCLEEGRIRSHTRAVLLGLQYLHS-NGIVHCDIKGQNILVSKDNEQGAKIADFGCARRARVNEDDEGKPI  162 (385)
Q Consensus        85 sL~~~l~-~~~~l~e~~~~~i~~qil~gL~yLH~-~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~  162 (385)
                      ||.++++ .+.+++|++++.++.|.+..|.-+-. +.-..+=+.|..|++..+|.  |-..+ +.+.             
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~--V~f~~-~~s~-------------   97 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA--VTLAP-AADD-------------   97 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC--EEECC-C----------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc--eeccc-cccc-------------
Confidence            6999998 68899999999999999999877622 22223445578899988776  44332 1110             


Q ss_pred             ccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCChHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHhhhc
Q 040569          163 CGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWPDVADPISALHRIGFSSDTPEIPGYMSKQAQDFLSKCLIR  242 (385)
Q Consensus       163 ~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ll~~cL~~  242 (385)
                      .....+.|||... ...+.+.=|||||+++|.-+--..                    .+.-+..+|+++.+||..|..-
T Consensus        98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL--------------------~e~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A           98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL--------------------KENEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC--------------------CTTEEECCCHHHHHHHHHHTTC
T ss_pred             ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC--------------------CcccchhhCHHHHHHHHHHHhc
Confidence            1233567888763 234456789999999999984221                    1222345899999999999865


No 269
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85  E-value=9.5e-05  Score=69.83  Aligned_cols=76  Identities=20%  Similarity=0.148  Sum_probs=56.7

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcC---CCCeeeeeeeeeeccCCeEEEEEEEeec
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALA---CPQIVAYKGCDISEENGKILYNLFLEYA   81 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~~~~~lv~Ey~   81 (385)
                      ..+.|+.|....+|+...  ++..+++|.........+.+|...|+.|.   ...+++.+.+....  +.  .++||||+
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--g~--~~lvme~l  113 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--GH--SFLLLEAL  113 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--SE--EEEEEECC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--Cc--eEEEEEec
Confidence            457789999999999875  46788899887666778899999999883   24556666554332  22  56899999


Q ss_pred             CCCCH
Q 040569           82 PGGTL   86 (385)
Q Consensus        82 ~ggsL   86 (385)
                      +|..+
T Consensus       114 ~G~~~  118 (312)
T 3jr1_A          114 NKSKN  118 (312)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            99764


No 270
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.83  E-value=8e-05  Score=69.53  Aligned_cols=72  Identities=15%  Similarity=0.057  Sum_probs=44.5

Q ss_pred             ceeeceeeccCceEEEEEEECCCCcEEEEEeccCCCHH--HHHHHHHHHHhcCCCCe-eeeeeeeeeccCCeEEEEEEEe
Q 040569            3 WTRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSE--FLQREQRILSALACPQI-VAYKGCDISEENGKILYNLFLE   79 (385)
Q Consensus         3 y~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~--~~~~E~~il~~l~hpnI-v~~~~~~~~~~~~~~~~~lv~E   79 (385)
                      |.-.+.|+.|....+|+.      ..+++|........  ..++|..+++.+..-.+ .++++.+  .+.+    ++++|
T Consensus        20 ~~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~----~~v~e   87 (301)
T 3dxq_A           20 YTGPLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD--PATG----VMVTR   87 (301)
T ss_dssp             CCSCEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTC----CEEEE
T ss_pred             ccceeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCC----EEEEe
Confidence            555788999999999998      46888877643222  23578888887732222 3444432  2222    26899


Q ss_pred             ec-CCCCH
Q 040569           80 YA-PGGTL   86 (385)
Q Consensus        80 y~-~ggsL   86 (385)
                      |+ +|.+|
T Consensus        88 ~i~~g~~l   95 (301)
T 3dxq_A           88 YIAGAQTM   95 (301)
T ss_dssp             CCTTCEEC
T ss_pred             ecCCCccC
Confidence            99 66544


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.78  E-value=0.0001  Score=72.23  Aligned_cols=32  Identities=16%  Similarity=0.390  Sum_probs=27.1

Q ss_pred             HCCceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569          117 SNGIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus       117 ~~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      ...++|+|++|.|||++.++   ++|+||+.+...
T Consensus       231 ~~~liHGDl~~~Nil~~~~~---~~lID~e~a~~G  262 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS---TQVIDPEFSFYG  262 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC---EEECCCTTCEEE
T ss_pred             CCeEEecCCCCCcEEEeCCC---CEEEeCcccccC
Confidence            45799999999999997542   999999988764


No 272
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.54  E-value=0.0003  Score=66.44  Aligned_cols=139  Identities=14%  Similarity=0.069  Sum_probs=72.6

Q ss_pred             eceeeccCceE-EEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCC--CCeeeeeeeeeeccCCeEEEEEEEeecC
Q 040569            6 GQTIGRGSTAT-VSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALAC--PQIVAYKGCDISEENGKILYNLFLEYAP   82 (385)
Q Consensus         6 ~~~LG~G~~g~-Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~h--pnIv~~~~~~~~~~~~~~~~~lv~Ey~~   82 (385)
                      .+.|+.|.... +|+... .++..+++|.......+.+..|+.+++.+..  -.+++++.+  +...+    +++||++.
T Consensus        23 ~~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~~~~~~e~~~l~~L~~~g~~vP~v~~~--d~~~g----~ll~e~l~   95 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAE--EHARG----LLLIEDLG   95 (333)
T ss_dssp             ECC--------CCEEEEC-TTCCEEEEEECCTTTTCCSHHHHHHHHHHHHTTCBCCCEEEE--ETTTT----EEEECCCC
T ss_pred             eeECCCCCCCceEEEEEc-CCCCeEEEEECCCCCCccccHHHHHHHHHHhCCCCCCceeee--cCCCC----EEEEeeCC
Confidence            45566665554 667653 2366788887654332455678888887732  224445543  22333    26899998


Q ss_pred             CCCHHHHHHcC--------------------------CCCCHHHHH-------H-HH------------HHHHHHHHHHH
Q 040569           83 GGTLTDAIRSG--------------------------TCLEEGRIR-------S-HT------------RAVLLGLQYLH  116 (385)
Q Consensus        83 ggsL~~~l~~~--------------------------~~l~e~~~~-------~-i~------------~qil~gL~yLH  116 (385)
                      +.++.+.+...                          ..++.....       . +.            ..+...++.+.
T Consensus        96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~  175 (333)
T 3csv_A           96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL  175 (333)
T ss_dssp             SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence            76665444211                          112221110       0 00            01111222221


Q ss_pred             ------HCCceeccCCCCCEEeecCC--CCCeEEeecCceeee
Q 040569          117 ------SNGIVHCDIKGQNILVSKDN--EQGAKIADFGCARRA  151 (385)
Q Consensus       117 ------~~givHrDlKp~NILi~~~~--~~~~kL~DFG~a~~~  151 (385)
                            ...++|||+.+.||+++.+.  ...+.|+||+.+...
T Consensus       176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence                  24699999999999997541  134899999988764


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.44  E-value=0.00033  Score=65.65  Aligned_cols=140  Identities=18%  Similarity=0.247  Sum_probs=76.4

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCC-CHHHHHHHHHHHHhcC-----CCCeeeee-eeeeeccCCeEEEEEE
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS-NSEFLQREQRILSALA-----CPQIVAYK-GCDISEENGKILYNLF   77 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~-~~~~~~~E~~il~~l~-----hpnIv~~~-~~~~~~~~~~~~~~lv   77 (385)
                      ..+.|+.|....+|+....  +..+++|..... ..+.+..|..+++.|.     .|.++... |.......+.  .+++
T Consensus        26 ~~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~--~~~l  101 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTT--KDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGR--PAAL  101 (322)
T ss_dssp             EEEEECC---EEEEEEEES--SCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTE--EEEE
T ss_pred             EeeccCCCcccceEEEEeC--CccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCE--EEEE
Confidence            3566777888999998764  336889988752 3456778899888773     23333211 1000011122  4579


Q ss_pred             EeecCCCCHH-----------HH---HH-cCCCC--------CHHHHHH---------------HHHHHHHHHHHHHH--
Q 040569           78 LEYAPGGTLT-----------DA---IR-SGTCL--------EEGRIRS---------------HTRAVLLGLQYLHS--  117 (385)
Q Consensus        78 ~Ey~~ggsL~-----------~~---l~-~~~~l--------~e~~~~~---------------i~~qil~gL~yLH~--  117 (385)
                      ++|++|..+.           ..   ++ ....+        ....-..               +...+...++.++.  
T Consensus       102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~  181 (322)
T 2ppq_A          102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW  181 (322)
T ss_dssp             EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred             EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence            9999986531           11   11 01011        1000000               00113444555553  


Q ss_pred             -----CCceeccCCCCCEEeecCCCCCeEEeecCceee
Q 040569          118 -----NGIVHCDIKGQNILVSKDNEQGAKIADFGCARR  150 (385)
Q Consensus       118 -----~givHrDlKp~NILi~~~~~~~~kL~DFG~a~~  150 (385)
                           .+++|+|+.+.|||++.++.  +.|+||+.+..
T Consensus       182 ~~~~~~~liHgDl~~~Nil~~~~~~--~~lIDf~~a~~  217 (322)
T 2ppq_A          182 PKDLPAGVIHADLFQDNVFFLGDEL--SGLIDFYFACN  217 (322)
T ss_dssp             CCSSCEEEECSCCCGGGEEEETTEE--EEECCCTTCEE
T ss_pred             cccCCcccCCCCCCccCEEEeCCce--EEEecchhccC
Confidence                 36999999999999985421  37999988764


No 274
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.38  E-value=0.0019  Score=59.54  Aligned_cols=74  Identities=12%  Similarity=0.031  Sum_probs=51.8

Q ss_pred             eeeceeeccCceEEEEEEECCCCcEEEEEeccCC---CHHHHHHHHHHHHhcCCC---CeeeeeeeeeeccCCeEEEEEE
Q 040569            4 TRGQTIGRGSTATVSIGMSNRSSEVFAVKSAELS---NSEFLQREQRILSALACP---QIVAYKGCDISEENGKILYNLF   77 (385)
Q Consensus         4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~---~~~~~~~E~~il~~l~hp---nIv~~~~~~~~~~~~~~~~~lv   77 (385)
                      ...+.+|.|..+.||+.... +|+.|.+|.....   ....+++|...|+.|..-   -+++.++.   . .    -++|
T Consensus        18 ~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---~-~----~~lv   88 (288)
T 3f7w_A           18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---D-D----RTLA   88 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---E-T----TEEE
T ss_pred             EEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---c-C----ceEE
Confidence            45678899999999999864 6889999986532   235788999999988321   23334332   1 1    1379


Q ss_pred             EeecCCCCH
Q 040569           78 LEYAPGGTL   86 (385)
Q Consensus        78 ~Ey~~ggsL   86 (385)
                      |||+.++..
T Consensus        89 ~e~l~~~~~   97 (288)
T 3f7w_A           89 MEWVDERPP   97 (288)
T ss_dssp             EECCCCCCC
T ss_pred             EEeecccCC
Confidence            999988653


No 275
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.37  E-value=0.00053  Score=67.56  Aligned_cols=73  Identities=16%  Similarity=0.153  Sum_probs=49.6

Q ss_pred             eeceeeccCceEEEEEEECC-------CCcEEEEEeccC-CCHHHHHHHHHHHHhcCCCCe-eeeeeeeeeccCCeEEEE
Q 040569            5 RGQTIGRGSTATVSIGMSNR-------SSEVFAVKSAEL-SNSEFLQREQRILSALACPQI-VAYKGCDISEENGKILYN   75 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~-------~~~~~AvK~~~~-~~~~~~~~E~~il~~l~hpnI-v~~~~~~~~~~~~~~~~~   75 (385)
                      ..+.|+.|-...||++....       .+..+++|+... ...+.+.+|..+++.|...++ +++++.+   .++     
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~---~~g-----  148 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIF---SGG-----  148 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEE---TTE-----
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEe---CCC-----
Confidence            35678888889999998653       257889998854 232666689999998843333 4555543   221     


Q ss_pred             EEEeecCCCC
Q 040569           76 LFLEYAPGGT   85 (385)
Q Consensus        76 lv~Ey~~ggs   85 (385)
                      +|+||++|-+
T Consensus       149 ~v~e~l~G~~  158 (429)
T 1nw1_A          149 RLEEYIPSRP  158 (429)
T ss_dssp             EEECCCCEEE
T ss_pred             EEEEEeCCcc
Confidence            6899998744


No 276
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.28  E-value=0.0011  Score=62.27  Aligned_cols=76  Identities=13%  Similarity=0.104  Sum_probs=47.3

Q ss_pred             eceeeccCceEEEEEEECCCCcEEEEEeccC--CCHHHHHHHHHHHHhcCCCC--eeeeeee---eeeccCCeEEEEEEE
Q 040569            6 GQTIGRGSTATVSIGMSNRSSEVFAVKSAEL--SNSEFLQREQRILSALACPQ--IVAYKGC---DISEENGKILYNLFL   78 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~--~~~~~~~~E~~il~~l~hpn--Iv~~~~~---~~~~~~~~~~~~lv~   78 (385)
                      ...|+ |....||++... +|+.+++|....  ...+.+.+|..+++.|....  +++.+..   ......+  ..++++
T Consensus        31 ~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g--~~~~l~  106 (328)
T 1zyl_A           31 LTPLN-SYENRVYQFQDE-DRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFAVF  106 (328)
T ss_dssp             CEEEC-CSSSEEEEECCT-TCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEEEE
T ss_pred             EEeec-CcccceEEEEcC-CCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC--EEEEEE
Confidence            34566 778899987543 466799998863  24677888999998883212  3333332   0001122  245799


Q ss_pred             eecCCCC
Q 040569           79 EYAPGGT   85 (385)
Q Consensus        79 Ey~~ggs   85 (385)
                      ||++|.+
T Consensus       107 ~~i~G~~  113 (328)
T 1zyl_A          107 PSVGGRQ  113 (328)
T ss_dssp             ECCCCEE
T ss_pred             EecCCCC
Confidence            9998854


No 277
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.23  E-value=0.00097  Score=64.60  Aligned_cols=137  Identities=16%  Similarity=0.146  Sum_probs=80.9

Q ss_pred             eceeeccCceEEEEEEECC-------CCcEEEEEeccC--CCHHHHHHHHHHHHhcC-CCCeeeeeeeeeeccCCeEEEE
Q 040569            6 GQTIGRGSTATVSIGMSNR-------SSEVFAVKSAEL--SNSEFLQREQRILSALA-CPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~~~-------~~~~~AvK~~~~--~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      .+.|..|-...+|++....       .++.+++|+...  .....+.+|.++++.|. +.-..++++.+   .++     
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~---~~g-----  126 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVF---PEG-----  126 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEE---TTE-----
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEc---CCc-----
Confidence            4566677788999987642       357899998643  23566779999999883 22234555443   221     


Q ss_pred             EEEeecCCCCHH--------------HHHH---c-----CCCCC--HHHHHHHHHHHHH-------------------HH
Q 040569           76 LFLEYAPGGTLT--------------DAIR---S-----GTCLE--EGRIRSHTRAVLL-------------------GL  112 (385)
Q Consensus        76 lv~Ey~~ggsL~--------------~~l~---~-----~~~l~--e~~~~~i~~qil~-------------------gL  112 (385)
                      +||||++|.+|.              +.++   .     +....  ...+..+..++-.                   .+
T Consensus       127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~  206 (379)
T 3feg_A          127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM  206 (379)
T ss_dssp             EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred             cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence            689999986542              1111   1     11111  3456666655422                   23


Q ss_pred             HHHH----HC----CceeccCCCCCEEeecC--CCCCeEEeecCceee
Q 040569          113 QYLH----SN----GIVHCDIKGQNILVSKD--NEQGAKIADFGCARR  150 (385)
Q Consensus       113 ~yLH----~~----givHrDlKp~NILi~~~--~~~~~kL~DFG~a~~  150 (385)
                      ..|.    ..    .++|+|+.+.||+++.+  ....+.|+||..|..
T Consensus       207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            3332    22    48999999999999865  123489999998865


No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.98  E-value=0.0022  Score=63.61  Aligned_cols=74  Identities=20%  Similarity=0.117  Sum_probs=48.5

Q ss_pred             eeceeeccCceEEEEEEECCCCcEEEEEeccCCCHH--HHHHHHHHHHhcCCCCe-eeeeeeeeeccCCeEEEEEEEeec
Q 040569            5 RGQTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSE--FLQREQRILSALACPQI-VAYKGCDISEENGKILYNLFLEYA   81 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~--~~~~E~~il~~l~hpnI-v~~~~~~~~~~~~~~~~~lv~Ey~   81 (385)
                      ..+.|+.|-...+|++.....+..+++|+.......  ...+|..+|+.|...++ +++++.+   .++     +|+||+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~---~~G-----~v~e~I  183 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF---TNG-----RIEEFM  183 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE---TTE-----EEEECC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe---CCe-----EEEEee
Confidence            456788888899999987644578889987543222  12689999999965444 4566554   221     489999


Q ss_pred             CCCCH
Q 040569           82 PGGTL   86 (385)
Q Consensus        82 ~ggsL   86 (385)
                      +|-+|
T Consensus       184 ~G~~l  188 (458)
T 2qg7_A          184 DGYAL  188 (458)
T ss_dssp             CSEEC
T ss_pred             CCccC
Confidence            88543


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.89  E-value=0.0019  Score=61.86  Aligned_cols=72  Identities=10%  Similarity=-0.081  Sum_probs=43.2

Q ss_pred             eceeeccCceEEEEEEECC--------CCcEEEEEeccCCCHH--HHHHHHHHHHhcCCCC-eeeeeeeeeeccCCeEEE
Q 040569            6 GQTIGRGSTATVSIGMSNR--------SSEVFAVKSAELSNSE--FLQREQRILSALACPQ-IVAYKGCDISEENGKILY   74 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~~~--------~~~~~AvK~~~~~~~~--~~~~E~~il~~l~hpn-Iv~~~~~~~~~~~~~~~~   74 (385)
                      .+.|+.|....+|++....        .+..+++|+.......  ...+|..+++.|...+ ++++++.+   ..     
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~---~~-----  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF---NG-----  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE---TT-----
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec---CC-----
Confidence            5677888888999997653        1367889987543221  2467899998884323 34555432   22     


Q ss_pred             EEEEeecCCCC
Q 040569           75 NLFLEYAPGGT   85 (385)
Q Consensus        75 ~lv~Ey~~ggs   85 (385)
                      ++||||++|.+
T Consensus       110 ~~v~e~i~G~~  120 (369)
T 3c5i_A          110 GRIEEWLYGDP  120 (369)
T ss_dssp             EEEEECCCSEE
T ss_pred             cEEEEEecCCc
Confidence            26899999854


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.88  E-value=0.0055  Score=58.14  Aligned_cols=31  Identities=29%  Similarity=0.412  Sum_probs=26.3

Q ss_pred             CceeccCCCCCEEeecCCCCCeEEeecCceeee
Q 040569          119 GIVHCDIKGQNILVSKDNEQGAKIADFGCARRA  151 (385)
Q Consensus       119 givHrDlKp~NILi~~~~~~~~kL~DFG~a~~~  151 (385)
                      .++|+|+.+.||+++.++.  +.|+||+.+...
T Consensus       207 ~~~HgD~~~~N~l~~~~~~--~~~iD~e~~~~~  237 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEES--IYIIDWDEPMLA  237 (339)
T ss_dssp             EEECSCCCGGGEEECGGGC--EEECCCSSCEEE
T ss_pred             eeEeCCCCcCCEEEeCCCe--EEEEECCCCeeC
Confidence            5899999999999976544  899999887754


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.86  E-value=0.039  Score=53.61  Aligned_cols=138  Identities=18%  Similarity=0.154  Sum_probs=78.6

Q ss_pred             eeceeeccCceEEEEEEECC-------CCcEEEEEeccCCCH---------------------HHHHHHHHHHHhcC-CC
Q 040569            5 RGQTIGRGSTATVSIGMSNR-------SSEVFAVKSAELSNS---------------------EFLQREQRILSALA-CP   55 (385)
Q Consensus         5 ~~~~LG~G~~g~Vy~a~~~~-------~~~~~AvK~~~~~~~---------------------~~~~~E~~il~~l~-hp   55 (385)
                      ..+.|..|-...+|++....       .+..|.+++......                     +.+..|..+++.+. +-
T Consensus        56 ~v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~G  135 (401)
T 3f2s_A           56 HISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERS  135 (401)
T ss_dssp             EEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcC
Confidence            34566667778999987642       136788887643211                     12234888888883 33


Q ss_pred             CeeeeeeeeeeccCCeEEEEEEEeecCCCCHH--------------HHHH---cC-CC----CC--HHHHHHHHHHHH--
Q 040569           56 QIVAYKGCDISEENGKILYNLFLEYAPGGTLT--------------DAIR---SG-TC----LE--EGRIRSHTRAVL--  109 (385)
Q Consensus        56 nIv~~~~~~~~~~~~~~~~~lv~Ey~~ggsL~--------------~~l~---~~-~~----l~--e~~~~~i~~qil--  109 (385)
                      -.+++++.+   .++     +|+||++|-+|.              ..++   .. .+    ..  ...+..+..++.  
T Consensus       136 i~Pkl~~~~---~~G-----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~  207 (401)
T 3f2s_A          136 LGPKLYGIF---PQG-----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRI  207 (401)
T ss_dssp             SSCCEEEEE---TTE-----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHC
T ss_pred             CCCeEEEEe---CCC-----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhc
Confidence            345565553   222     588999975541              1111   11 11    11  223444444332  


Q ss_pred             --------------------HHHH----HHHHC----CceeccCCCCCEEeecCC----CCCeEEeecCceee
Q 040569          110 --------------------LGLQ----YLHSN----GIVHCDIKGQNILVSKDN----EQGAKIADFGCARR  150 (385)
Q Consensus       110 --------------------~gL~----yLH~~----givHrDlKp~NILi~~~~----~~~~kL~DFG~a~~  150 (385)
                                          .-+.    +|...    .++|+|+.+.|||++.+.    ...+.|+||..|..
T Consensus       208 ~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          208 KFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             CCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             cCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence                                1122    23332    489999999999998651    12489999988764


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.28  E-value=0.024  Score=55.58  Aligned_cols=73  Identities=11%  Similarity=-0.065  Sum_probs=46.9

Q ss_pred             eceeeccCceEEEEEEECCC-------CcEEEEEeccCCCH--HHHHHHHHHHHhcC-CCCeeeeeeeeeeccCCeEEEE
Q 040569            6 GQTIGRGSTATVSIGMSNRS-------SEVFAVKSAELSNS--EFLQREQRILSALA-CPQIVAYKGCDISEENGKILYN   75 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~~~~-------~~~~AvK~~~~~~~--~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~~~~   75 (385)
                      .+.|..|-...+|+......       ++.+++|+......  -..++|.++++.|. +.-.+++++.+   .+     +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~---~~-----~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF---PE-----G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE---TT-----E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc---CC-----C
Confidence            56677777889999987521       57889998754322  13468999999884 22234444422   22     2


Q ss_pred             EEEeecCCCCH
Q 040569           76 LFLEYAPGGTL   86 (385)
Q Consensus        76 lv~Ey~~ggsL   86 (385)
                      +|+||++|.+|
T Consensus       147 ~I~efI~G~~l  157 (424)
T 3mes_A          147 RIEEFIDGEPL  157 (424)
T ss_dssp             EEEECCCSEEC
T ss_pred             EEEEEeCCccC
Confidence            68999998653


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.06  E-value=0.13  Score=49.64  Aligned_cols=31  Identities=26%  Similarity=0.366  Sum_probs=24.6

Q ss_pred             ceeccCCCCCEEeecC----CCCCeEEeecCceee
Q 040569          120 IVHCDIKGQNILVSKD----NEQGAKIADFGCARR  150 (385)
Q Consensus       120 ivHrDlKp~NILi~~~----~~~~~kL~DFG~a~~  150 (385)
                      ++|+|+.+.|||+..+    ....++++||..|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6899999999999542    233489999998875


No 284
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.28  E-value=0.11  Score=51.40  Aligned_cols=57  Identities=11%  Similarity=0.063  Sum_probs=17.1

Q ss_pred             eceeeccCceEEEEEEECCCCcEEEE------EeccC-----CCHHHHHHHHHHHHhcCCCCeeeeeeeee
Q 040569            6 GQTIGRGSTATVSIGMSNRSSEVFAV------KSAEL-----SNSEFLQREQRILSALACPQIVAYKGCDI   65 (385)
Q Consensus         6 ~~~LG~G~~g~Vy~a~~~~~~~~~Av------K~~~~-----~~~~~~~~E~~il~~l~hpnIv~~~~~~~   65 (385)
                      .+.||   ||.||+|..+.....||+      |....     .....+.+|..+++.++|||+++.+++..
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            45666   999999998765567888      65432     12235667999999999999999987754


No 285
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=70.21  E-value=9.8  Score=35.60  Aligned_cols=135  Identities=19%  Similarity=0.174  Sum_probs=68.7

Q ss_pred             ceeeccCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHHHHhcCCCCeeeeeee--------------ee-----ec
Q 040569            7 QTIGRGSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRILSALACPQIVAYKGC--------------DI-----SE   67 (385)
Q Consensus         7 ~~LG~G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~--------------~~-----~~   67 (385)
                      +..-.|+.| ||.+.-  ++..++||....-..|.+--++...-.+..|+..-+.-.              ..     ..
T Consensus        75 ~~s~~Gstg-vff~~t--d~~~~VVK~s~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~~  151 (342)
T 1cja_A           75 ERSEKGTEG-LFFVET--ESGVFIVKRSTNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVITT  151 (342)
T ss_dssp             EECCSTTSC-EEEEEE--SSCEEEEECCTTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHHH
T ss_pred             EeccCCCCC-eEEEEe--CCCEEEEeCcHHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHHH
Confidence            333455544 444444  477999996532123333344444445566664333211              00     00


Q ss_pred             cCCeEEEEEEEeecCCCCHHHHHHc--CCCCCHHHHHHHHHHH--HHHHHHHHHCC----c-eeccCCCCCEEeecCCCC
Q 040569           68 ENGKILYNLFLEYAPGGTLTDAIRS--GTCLEEGRIRSHTRAV--LLGLQYLHSNG----I-VHCDIKGQNILVSKDNEQ  138 (385)
Q Consensus        68 ~~~~~~~~lv~Ey~~ggsL~~~l~~--~~~l~e~~~~~i~~qi--l~gL~yLH~~g----i-vHrDlKp~NILi~~~~~~  138 (385)
                      ..... +.++|||.+|..|...-..  ...+.++.    ..++  +-+++.+..++    . -+.--.+.|||+..++. 
T Consensus       152 l~~~~-~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~-  225 (342)
T 1cja_A          152 LANQA-NILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA-  225 (342)
T ss_dssp             HTTCS-EEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT-
T ss_pred             hhccc-ceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC-
Confidence            00011 4589999998665532111  01133333    3333  33455555542    1 11235789999987653 


Q ss_pred             CeEEeecCceee
Q 040569          139 GAKIADFGCARR  150 (385)
Q Consensus       139 ~~kL~DFG~a~~  150 (385)
                      .+.++|-+++..
T Consensus       226 ~~~~IDhn~af~  237 (342)
T 1cja_A          226 TVVPIDSKIIPL  237 (342)
T ss_dssp             CEEECSCCCCCC
T ss_pred             eEEEEcCCcccc
Confidence            588899988854


No 286
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=55.29  E-value=18  Score=31.57  Aligned_cols=116  Identities=14%  Similarity=0.115  Sum_probs=68.1

Q ss_pred             CCCCeeeeeeeeeeccCCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEe
Q 040569           53 ACPQIVAYKGCDISEENGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILV  132 (385)
Q Consensus        53 ~hpnIv~~~~~~~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi  132 (385)
                      .||++ ..-   +....+.  +.+.++.-+++.=...+++   ++....++++.+|+.... -|...-+|--|.|+||++
T Consensus        48 ~~~~f-~~~---I~~~eD~--~~i~y~~~~~~~~f~~i~~---~~~~eKlrll~nl~~L~~-~~~~~r~tf~l~P~NL~f  117 (219)
T 4ano_A           48 VDPCI-VRD---IDVSEDE--VKVVIKPPSSFLTFAAIRK---TTLLSRIRAAIHLVSKVK-HHSARRLIFIVCPENLMF  117 (219)
T ss_dssp             SCSSS-EEE---EEECSSE--EEEEEECCTTCEEHHHHHT---SCHHHHHHHHHHHHHHHS-SCCSSSEECCCCGGGEEE
T ss_pred             cCCCC-CeE---EEEeCCE--EEEEEEcCcccCcHHHHHh---cCHHHHHHHHHHHHHHHH-HhhhCceeEEEeCceEEE
Confidence            78888 432   2222222  2234444333322333432   688888888888877554 023456888999999999


Q ss_pred             ecCCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCC
Q 040569          133 SKDNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWP  203 (385)
Q Consensus       133 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  203 (385)
                      +.++.  ++|.-.|+-.                  -|+|.-+..     .-=+-..=|++..++.++..|.
T Consensus       118 ~~~~~--p~i~hRGi~~------------------~lpP~e~~e-----e~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          118 NRALE--PFFLHVGVKE------------------SLPPDEWDD-----ERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             CTTCC--EEESCCEETT------------------TBSSCSCCH-----HHHHHHHHHHHHHHTTCSSCHH
T ss_pred             eCCCc--EEEEEcCCcc------------------cCCCCCCCH-----HHHHHHHHHHHHHHHcCCCCHH
Confidence            98776  8887666532                  223322110     1112346788899998887763


No 287
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=47.04  E-value=1.8e+02  Score=27.62  Aligned_cols=107  Identities=7%  Similarity=0.110  Sum_probs=65.3

Q ss_pred             cCceEEEEEEECCCCcEEEEEeccCCCHHHHHHHHHH----H-HhcCCCCeeeeeeeeeeccCCeEEEEEEEeecCCCCH
Q 040569           12 GSTATVSIGMSNRSSEVFAVKSAELSNSEFLQREQRI----L-SALACPQIVAYKGCDISEENGKILYNLFLEYAPGGTL   86 (385)
Q Consensus        12 G~~g~Vy~a~~~~~~~~~AvK~~~~~~~~~~~~E~~i----l-~~l~hpnIv~~~~~~~~~~~~~~~~~lv~Ey~~ggsL   86 (385)
                      |..|..+.-   .....|+||.+...+.+.+++-+.-    + +.-.+--+++++|++...-.+...+++|||.+-.+.+
T Consensus       117 GKSGs~F~~---T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TLL~k~~Gly~v~~~~~~~~fvVM~Nlf~~~~  193 (394)
T 2ybx_A          117 ARSGARFHT---SYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRL  193 (394)
T ss_dssp             ---CCCEEE---CTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTCCSSCCEEEEEEEEETTEEEEEEEEECSSCSSS
T ss_pred             CCccCEEEE---eCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCCcChhhhcEEEEEEECCeEEEEEEEecCCCCCc
Confidence            344444432   3457899999986655555432221    2 2223344678999886665666778899997533211


Q ss_pred             -----------------------------H--HHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 040569           87 -----------------------------T--DAIRS--GTCLEEGRIRSHTRAVLLGLQYLHSNGIV  121 (385)
Q Consensus        87 -----------------------------~--~~l~~--~~~l~e~~~~~i~~qil~gL~yLH~~giv  121 (385)
                                                   .  +++..  .-.+.+.....+..||-.=.++|.+.+|+
T Consensus       194 ~i~~~yDLKGS~~~R~~~~~~~~~~~~~LkD~df~~~~~~i~l~~~~k~~l~~qL~~D~~FL~~~~iM  261 (394)
T 2ybx_A          194 SVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLM  261 (394)
T ss_dssp             CCSEEEEECCSSSCCCCCHHHHTSSSCEECHHHHHHTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             ceeeeeeecccccCCccCccccccCcceecccchHhcCCeEEECHHHHHHHHHHHHHHHHHHHHCCCc
Confidence                                         1  12221  22356777888899999999999998853


No 288
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=44.67  E-value=19  Score=31.46  Aligned_cols=116  Identities=6%  Similarity=-0.045  Sum_probs=69.5

Q ss_pred             CCCCeeeeeeeeeeccCCeEEEEEEEeecCCCCHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCCEEe
Q 040569           53 ACPQIVAYKGCDISEENGKILYNLFLEYAPGGTLTDAIRSGTCLEEGRIRSHTRAVLLGLQYLHSNGIVHCDIKGQNILV  132 (385)
Q Consensus        53 ~hpnIv~~~~~~~~~~~~~~~~~lv~Ey~~ggsL~~~l~~~~~l~e~~~~~i~~qil~gL~yLH~~givHrDlKp~NILi  132 (385)
                      .||+.++.- +....  +.  +  +..|-...+...+-. -..++....++++.+|+....++  ..-+|--|.|+||++
T Consensus        43 ~~~~Fl~~~-I~e~e--D~--v--~~~y~~~~~~~~f~~-ik~~~~~eKlr~l~ni~~l~~~~--~~r~tf~L~P~NL~f  112 (215)
T 4ann_A           43 HSPYFIDAE-LTELR--DS--F--QIHYDINDNHTPFDN-IKSFTKNEKLRYLLNIKNLEEVN--RTRYTFVLAPDELFF  112 (215)
T ss_dssp             CCTTBCCEE-EEECS--SE--E--EEEECCCTTSEEGGG-GGGSCHHHHHHHHHHGGGGGGGG--GSSEECCCSGGGEEE
T ss_pred             cCCcccceE-EEEcc--cE--E--EEEEEcCcccCCHHH-HHhcCHHHHHHHHHHHHHHHHHh--cCceEEEEecceEEE
Confidence            689888762 22222  22  2  334443333222222 11268888899999988876443  445788999999999


Q ss_pred             ecCCCCCeEEeecCceeeecccCCCCCCccccCCcccChhhhcCCCCCCCCChHHHHHHHHHHHhCCCCCC
Q 040569          133 SKDNEQGAKIADFGCARRARVNEDDEGKPICGTPICMAPEVARGEEQGFPADVWALGCTVLEMATGRPPWP  203 (385)
Q Consensus       133 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~Gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  203 (385)
                      +.++.  +++.-.|+-...                  +|.-     .+...=+-..=|++..+++++..|.
T Consensus       113 ~~~~~--p~i~~RGik~~l------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          113 TRDGL--PIAKTRGLQNVV------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             CTTSC--EEESCCEETTTB------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             cCCCC--EEEEEccCccCC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            97766  788766653222                  2221     1111123346789999999988874


No 289
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=38.15  E-value=73  Score=32.81  Aligned_cols=67  Identities=18%  Similarity=0.269  Sum_probs=40.7

Q ss_pred             EEeecCCCCHHHHHHcCCC---------------C--CHHHHHHHHHHHH--HHHHHHHHCCceeccCCCCCEEeecCCC
Q 040569           77 FLEYAPGGTLTDAIRSGTC---------------L--EEGRIRSHTRAVL--LGLQYLHSNGIVHCDIKGQNILVSKDNE  137 (385)
Q Consensus        77 v~Ey~~ggsL~~~l~~~~~---------------l--~e~~~~~i~~qil--~gL~yLH~~givHrDlKp~NILi~~~~~  137 (385)
                      +.|++++.+|.+++++.+.               +  .......++++++  ..+.|+=.-    +|-.++||||+..|.
T Consensus       490 LIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGl----GDRH~~NILid~tG~  565 (696)
T 2x6h_A          490 FLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGV----GDRHLDNLLLTTNGK  565 (696)
T ss_dssp             EEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTC----CCCCTTTEEECTTSC
T ss_pred             eeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccC----CCCCCcceEEeCCCC
Confidence            3577777677777653321               1  1233344544443  333444333    588999999996554


Q ss_pred             CCeEEeecCcee
Q 040569          138 QGAKIADFGCAR  149 (385)
Q Consensus       138 ~~~kL~DFG~a~  149 (385)
                        +.-+|||.+-
T Consensus       566 --v~HIDFG~~f  575 (696)
T 2x6h_A          566 --LFHIDFGYIL  575 (696)
T ss_dssp             --EEECCCCSCT
T ss_pred             --EEEEeehhhh
Confidence              9999999874


No 290
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=29.26  E-value=4.9  Score=39.49  Aligned_cols=30  Identities=20%  Similarity=-0.119  Sum_probs=24.8

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeeeeeeecc
Q 040569           39 SEFLQREQRILSALACPQIVAYKGCDISEE   68 (385)
Q Consensus        39 ~~~~~~E~~il~~l~hpnIv~~~~~~~~~~   68 (385)
                      .+.|+.|++.+.+++|+|+|++.|++....
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            457889999999999999999999876543


Done!