Query 040572
Match_columns 142
No_of_seqs 102 out of 115
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 15:33:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040572.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040572hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1khda1 a.46.2.1 (A:12-80) Ant 66.8 10 0.00073 22.5 6.8 42 88-129 24-66 (69)
2 d1jr3a1 a.80.1.1 (A:243-368) g 66.2 6.9 0.0005 24.6 5.4 43 83-125 5-48 (126)
3 d1g2ya_ a.34.2.1 (A:) Hepatocy 65.8 1.6 0.00012 24.8 1.9 15 88-102 13-27 (31)
4 d2ezla_ a.4.1.2 (A:) Ibeta sub 62.7 15 0.0011 24.6 7.0 58 68-126 22-79 (99)
5 d1wgwa_ a.24.13.1 (A:) Signal 62.3 4.6 0.00034 26.6 4.1 42 89-130 19-66 (99)
6 d2a7wa1 a.204.1.4 (A:4-94) Pho 59.8 9.4 0.00069 25.0 5.3 31 83-121 56-86 (91)
7 d1jr3d1 a.80.1.1 (D:212-338) d 58.2 4.5 0.00033 25.0 3.3 42 85-126 3-45 (127)
8 d2d8da1 a.130.1.1 (A:3-82) Cho 51.0 12 0.00087 22.7 4.4 61 67-127 10-78 (80)
9 d2f2ab1 a.182.1.2 (B:294-400) 49.9 17 0.0012 23.2 5.2 44 85-128 52-104 (107)
10 d2tpta1 a.46.2.1 (A:1-70) Thym 48.3 23 0.0017 20.9 6.0 41 88-128 26-67 (70)
11 d1p2fa1 a.4.6.1 (A:121-217) Re 48.3 11 0.00083 22.9 4.0 49 80-130 29-77 (97)
12 d1yvwa1 a.204.1.4 (A:4-95) Pho 47.5 19 0.0014 23.5 5.3 29 83-119 55-83 (92)
13 d1o17a1 a.46.2.1 (A:1-70) Anth 45.7 25 0.0018 20.5 6.1 41 88-128 25-66 (70)
14 d1x91a_ a.29.6.1 (A:) Pectin m 45.4 19 0.0014 22.7 5.0 45 80-126 44-91 (149)
15 d3czha1 a.104.1.1 (A:40-502) V 44.6 5.1 0.00037 27.7 2.0 46 85-130 262-307 (463)
16 d1j8yf1 a.24.13.1 (F:3-86) Sig 42.2 14 0.001 23.5 3.8 30 101-130 28-57 (84)
17 d2ciba1 a.104.1.1 (A:5-449) Cy 41.6 5.9 0.00043 28.2 2.0 43 85-127 243-285 (445)
18 d1aora1 a.110.1.1 (A:211-605) 41.1 23 0.0017 27.5 5.7 44 82-125 117-180 (395)
19 d1sfxa_ a.4.5.50 (A:) Hypothet 40.9 19 0.0014 22.4 4.3 42 87-128 8-62 (109)
20 d1vgya2 d.58.19.1 (A:181-293) 40.6 13 0.00091 23.4 3.4 22 109-130 20-42 (113)
21 d3c1va1 a.39.1.2 (A:2-94) Calc 39.5 38 0.0028 20.8 6.6 33 93-125 24-62 (93)
22 d2cyya1 a.4.5.32 (A:5-64) Puta 39.4 14 0.001 21.3 3.2 17 111-127 28-44 (60)
23 d1khya_ a.174.1.1 (A:) N-termi 39.2 39 0.0028 20.8 6.6 17 107-123 123-139 (139)
24 d1ecma_ a.130.1.1 (A:) Chorism 38.7 29 0.0021 21.1 4.8 61 67-127 10-79 (91)
25 d1rxda_ c.45.1.1 (A:) Protein 38.6 11 0.00081 24.2 2.9 30 95-127 99-128 (152)
26 d1w98b2 a.74.1.1 (B:88-227) G1 38.3 21 0.0015 23.3 4.3 28 80-109 45-72 (140)
27 d2ivxa1 a.74.1.1 (A:7-149) Cyc 37.6 44 0.0032 21.1 5.9 58 49-110 3-61 (143)
28 d1wrka1 a.39.1.5 (A:4-85) Trop 36.2 25 0.0019 21.0 4.2 54 67-124 6-61 (82)
29 d1wpna_ c.107.1.1 (A:) Mangane 35.7 23 0.0017 23.4 4.2 25 96-120 157-182 (187)
30 d1yxba1 a.204.1.4 (A:4-91) Pho 34.7 33 0.0024 22.2 4.8 29 83-119 57-85 (88)
31 d1d4ca3 d.168.1.1 (A:360-505) 34.5 8.7 0.00064 25.3 1.8 13 111-123 95-107 (146)
32 d1ls1a1 a.24.13.1 (A:1-88) Sig 32.7 24 0.0018 22.5 3.8 34 95-128 21-59 (88)
33 d1ijwc_ a.4.1.2 (C:) HIN recom 31.8 35 0.0025 19.6 4.1 25 96-120 6-30 (47)
34 d1tqna_ a.104.1.1 (A:) Mammali 31.5 11 0.00079 26.5 2.0 47 84-130 268-314 (472)
35 d1gxqa_ a.4.6.1 (A:) PhoB {Esc 31.1 19 0.0014 22.4 3.0 52 79-130 33-84 (105)
36 d1n97a_ a.104.1.1 (A:) Cyp175a 30.1 20 0.0014 25.5 3.3 42 84-125 211-252 (385)
37 d2qw6a1 a.80.1.2 (A:241-328) U 29.7 54 0.0039 21.5 5.3 37 84-123 19-61 (88)
38 d2bgca1 a.4.5.4 (A:138-237) Li 29.2 52 0.0038 20.9 5.1 34 87-122 36-82 (100)
39 d1g3nc1 a.74.1.1 (C:16-147) Vi 29.1 41 0.003 21.7 4.6 36 79-116 37-77 (132)
40 d1ft9a1 a.4.5.4 (A:134-213) CO 29.0 19 0.0014 21.3 2.6 33 92-129 27-59 (80)
41 d2ij2a1 a.104.1.1 (A:3-455) Cy 28.7 13 0.00092 26.5 2.0 46 83-128 251-296 (453)
42 d1bu2a1 a.74.1.1 (A:22-148) Vi 28.7 27 0.0019 22.7 3.5 29 80-110 33-61 (127)
43 d1brwa1 a.46.2.1 (A:1-70) Pyri 28.1 53 0.0039 19.1 6.6 41 88-128 25-66 (70)
44 d1dtla_ a.39.1.5 (A:) Troponin 28.0 58 0.0043 20.0 5.1 60 65-128 3-64 (156)
45 d1y0pa3 d.168.1.1 (A:362-504) 27.7 15 0.0011 24.1 2.1 23 100-124 85-107 (143)
46 d1f5qb1 a.74.1.1 (B:6-146) Vir 27.5 28 0.002 22.9 3.5 29 79-109 45-73 (141)
47 d1q3qa1 a.129.1.2 (A:9-145,A:4 26.9 21 0.0016 25.7 3.0 25 96-120 95-119 (258)
48 d2cj4a1 a.29.6.1 (A:4-150) Inv 26.9 38 0.0027 21.3 4.0 46 79-125 45-93 (147)
49 d1gg4a4 c.72.2.1 (A:99-312) UD 26.7 16 0.0012 23.4 2.1 26 100-125 188-213 (214)
50 d2h9da1 a.130.1.1 (A:1-94) Sal 26.5 34 0.0025 21.3 3.6 60 67-126 17-84 (94)
51 d2f71a1 c.45.1.2 (A:2-298) Tyr 26.4 15 0.0011 26.5 2.1 36 95-130 217-258 (297)
52 d2gaua1 a.4.5.4 (A:152-232) Tr 25.7 25 0.0019 20.5 2.7 29 95-128 29-57 (81)
53 d1oyza_ a.118.1.16 (A:) Hypoth 25.6 37 0.0027 21.5 3.7 30 97-126 246-275 (276)
54 d3e5ua1 a.4.5.4 (A:148-227) Ch 25.4 25 0.0018 20.7 2.7 33 92-129 27-59 (80)
55 d3broa1 a.4.5.28 (A:3-137) Tra 25.0 72 0.0052 19.5 6.4 28 93-120 24-54 (135)
56 d1opca_ a.4.6.1 (A:) OmpR {Esc 25.0 14 0.001 22.5 1.5 52 80-131 28-79 (99)
57 d1fpza_ c.45.1.1 (A:) Kinase a 24.9 56 0.0041 21.7 4.8 32 95-126 119-152 (176)
58 d1b25a1 a.110.1.1 (A:211-619) 24.9 67 0.0049 24.8 5.9 43 82-124 112-167 (409)
59 d2bgxa1 a.20.1.1 (A:180-260) P 24.4 15 0.0011 23.5 1.6 24 86-109 54-77 (81)
60 d1zyba1 a.4.5.4 (A:148-220) Pr 23.1 28 0.0021 20.7 2.6 29 96-129 28-56 (73)
61 d1ys7a1 a.4.6.1 (A:128-233) Tr 22.7 39 0.0029 20.8 3.4 52 79-130 35-86 (106)
62 d2ev0a2 a.76.1.1 (A:63-136) Ma 22.2 78 0.0057 18.9 6.9 28 95-122 26-53 (74)
63 d1l9la_ a.64.1.1 (A:) Granulys 21.6 32 0.0023 20.3 2.6 18 101-118 53-70 (74)
64 d2a61a1 a.4.5.28 (A:5-143) Tra 21.5 76 0.0055 19.6 4.7 27 93-119 25-52 (139)
65 d1e8ca3 c.72.2.1 (A:104-337) U 21.2 22 0.0016 23.1 1.9 24 101-124 209-232 (234)
66 d1r9oa_ a.104.1.1 (A:) Mammali 21.1 22 0.0016 24.6 2.0 39 90-128 268-306 (467)
67 d2af7a1 a.152.1.2 (A:1-119) Ga 20.9 1E+02 0.0073 19.7 5.4 16 107-122 80-95 (119)
68 d1ztca1 d.157.1.11 (A:1-207) H 20.7 2.5 0.00018 27.0 -3.0 11 59-69 29-39 (207)
69 d1y14a_ a.60.8.2 (A:) RNA poly 20.4 1.1E+02 0.0083 21.8 6.0 62 65-126 105-171 (176)
70 d2q0ia1 d.157.1.14 (A:1-298) Q 20.4 2.5 0.00018 29.8 -3.3 22 93-114 38-59 (298)
71 d1b0nb_ a.34.1.1 (B:) SinI ant 20.2 70 0.0051 17.6 4.5 26 95-120 2-27 (31)
72 d1wjia_ a.5.2.1 (A:) Tudor dom 20.1 83 0.006 18.5 6.5 50 88-140 13-62 (63)
No 1
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=66.81 E-value=10 Score=22.49 Aligned_cols=42 Identities=24% Similarity=0.386 Sum_probs=33.8
Q ss_pred HHHHhcCCCCHHHH-HHHHHHHhCCCCHHHHHHHHHHHHhCCC
Q 040572 88 MSNILDTGLDRHTL-SVLIALCDLGVNPEALAAVVKELQREPS 129 (142)
Q Consensus 88 IS~LLNTGLDReTL-sICI~LcE~GVNPEALA~VIKELRrE~~ 129 (142)
|..|++=.++...+ ++++.|...|.+++.|+..++-+|+.+.
T Consensus 24 ~~~i~~g~~~d~qiaafL~al~~kg~t~dEi~g~~~am~~~~~ 66 (69)
T d1khda1 24 FAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQ 66 (69)
T ss_dssp HHHHTTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSC
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCC
Confidence 44566766666554 6788999999999999999999998775
No 2
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=66.17 E-value=6.9 Score=24.64 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHH-HHHHHHH
Q 040572 83 DLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALA-AVVKELQ 125 (142)
Q Consensus 83 DiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA-~VIKELR 125 (142)
+.++++.+-+-.|=-.+.|.++=++++.|++|+.+. .++..+|
T Consensus 5 ~~~~~L~~~I~~~d~~~~L~~l~~i~~~G~d~~~~l~~L~~~~r 48 (126)
T d1jr3a1 5 DQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLH 48 (126)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 345666666666777889999999999999999843 4444444
No 3
>d1g2ya_ a.34.2.1 (A:) Hepatocyte nuclear factor 1 (HNF-1), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.82 E-value=1.6 Score=24.83 Aligned_cols=15 Identities=27% Similarity=0.702 Sum_probs=12.7
Q ss_pred HHHHhcCCCCHHHHH
Q 040572 88 MSNILDTGLDRHTLS 102 (142)
Q Consensus 88 IS~LLNTGLDReTLs 102 (142)
++.||+.||++|+|.
T Consensus 13 laallesgl~ke~li 27 (31)
T d1g2ya_ 13 LAALLESGLSKEALI 27 (31)
T ss_dssp HHHHHHTTCCHHHHH
T ss_pred HHHHHHcCCcHHHHH
Confidence 577899999999875
No 4
>d2ezla_ a.4.1.2 (A:) Ibeta subdomain of the mu end DNA-binding domain of phage mu transposase {Bacteriophage mu [TaxId: 10677]}
Probab=62.75 E-value=15 Score=24.60 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 040572 68 DDMDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQR 126 (142)
Q Consensus 68 ~~md~d~~~aArEtLDiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRr 126 (142)
+.-.....+.|+.-|++|+.+-.|++.|+.+..---.|. -+.||.+..|-.=...+..
T Consensus 22 e~~s~k~k~~Ak~RL~~l~~V~~L~~~G~~~~~A~~~VA-~~~~vs~~TL~nW~~~V~g 79 (99)
T d2ezla_ 22 DNASDSQRRLAEKWLPAVQAADEMLNQGISTKTAFATVA-GHYQVSASTLRDKYYQVQK 79 (99)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH-HHSSSCHHHHHHHHHHHHT
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH-HHhCCCHHHHHHHHHHHCC
Confidence 344556778899999999999999999999865433333 2779999998776555443
No 5
>d1wgwa_ a.24.13.1 (A:) Signal recognition particle 54 kDa protein, SRP54 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=62.26 E-value=4.6 Score=26.61 Aligned_cols=42 Identities=12% Similarity=0.170 Sum_probs=32.8
Q ss_pred HHHhcCC-CCHHH-----HHHHHHHHhCCCCHHHHHHHHHHHHhCCCC
Q 040572 89 SNILDTG-LDRHT-----LSVLIALCDLGVNPEALAAVVKELQREPSP 130 (142)
Q Consensus 89 S~LLNTG-LDReT-----LsICI~LcE~GVNPEALA~VIKELRrE~~a 130 (142)
+.|-+.+ ||-+. -.||.+|+|+-||..-.-..++.|++....
T Consensus 19 ~~l~~~~~i~E~~I~~~l~eI~~ALLeADVn~~vV~~f~~~Ik~k~~~ 66 (99)
T d1wgwa_ 19 RSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDL 66 (99)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSCC
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc
Confidence 4444443 66554 468999999999999999999999988755
No 6
>d2a7wa1 a.204.1.4 (A:4-94) Phosphoribosyl-ATP pyrophosphatase HisE {Chromobacterium violaceum [TaxId: 536]}
Probab=59.84 E-value=9.4 Score=24.99 Aligned_cols=31 Identities=16% Similarity=0.374 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHH
Q 040572 83 DLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVV 121 (142)
Q Consensus 83 DiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VI 121 (142)
++++|.++|| .-++|-|-..||+|+.+....
T Consensus 56 ~vi~EaADLl--------yHllVlL~~~gi~~~dV~~eL 86 (91)
T d2a7wa1 56 HLVREVADLW--------FHTMVLLTYHGLRPEDVVMEL 86 (91)
T ss_dssp HHHHHHHHHH--------HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHH--------HHHHHHHHHCCCCHHHHHHHH
Confidence 4677777777 567889999999998765544
No 7
>d1jr3d1 a.80.1.1 (D:212-338) delta subunit {Escherichia coli [TaxId: 562]}
Probab=58.22 E-value=4.5 Score=25.04 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=30.2
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHH-HHHHHHHHHh
Q 040572 85 AFHMSNILDTGLDRHTLSVLIALCDLGVNPEA-LAAVVKELQR 126 (142)
Q Consensus 85 L~EIS~LLNTGLDReTLsICI~LcE~GVNPEA-LA~VIKELRr 126 (142)
+|++.+-+-.|=-..++.++=.|.+.|.+|-. |+.++.++|+
T Consensus 3 ~F~L~dai~~gd~~~a~~il~~l~~~g~~~~~il~~l~~~~~~ 45 (127)
T d1jr3d1 3 PFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLL 45 (127)
T ss_dssp HHHHHHHHTTSCHHHHHHHHTSSTTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 45666666667677888888888888888877 5555556554
No 8
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=51.03 E-value=12 Score=22.66 Aligned_cols=61 Identities=21% Similarity=0.191 Sum_probs=44.9
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhc---CC-CCH----HHHHHHHHHHhCCCCHHHHHHHHHHHHhC
Q 040572 67 VDDMDPEAARTARESLDLAFHMSNILD---TG-LDR----HTLSVLIALCDLGVNPEALAAVVKELQRE 127 (142)
Q Consensus 67 ~~~md~d~~~aArEtLDiL~EIS~LLN---TG-LDR----eTLsICI~LcE~GVNPEALA~VIKELRrE 127 (142)
+|.+|.+-+.--.+-++++.+|+.+=. .. +|. .-+.-+.+..+.|++|+.+..+.++|-.+
T Consensus 10 ID~iD~~i~~Ll~~R~~~~~~i~~~K~~~~~~i~~~~RE~~v~~~~~~~~~~~l~~~~i~~i~r~Ii~~ 78 (80)
T d2d8da1 10 VDRVNREILRLLSERGRLVQEIGRLQTELGLPHYDPKREEEMLAYLTAENPGPFPDETIRKLFKEIFKA 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 466777777778888899999998733 22 232 34555677778899999999999988653
No 9
>d2f2ab1 a.182.1.2 (B:294-400) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=49.94 E-value=17 Score=23.24 Aligned_cols=44 Identities=23% Similarity=0.259 Sum_probs=30.4
Q ss_pred HHHHHHHhc--------CCCCHHHHHHHHHHHhCC-CCHHHHHHHHHHHHhCC
Q 040572 85 AFHMSNILD--------TGLDRHTLSVLIALCDLG-VNPEALAAVVKELQREP 128 (142)
Q Consensus 85 L~EIS~LLN--------TGLDReTLsICI~LcE~G-VNPEALA~VIKELRrE~ 128 (142)
+.++..+|| +.++.+.|.-+|.|++.| ++...--.|+.+|-+..
T Consensus 52 ~~el~~~ln~~~~~i~~~~i~~~~la~Li~lv~~g~Is~~~aK~vl~~~~~~g 104 (107)
T d2f2ab1 52 MGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKG 104 (107)
T ss_dssp HTHHHHHHHTTTCCTTTSSCCHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCccccCCcCHHHHHHHHHHHHcCCccHHHHHHHHHHHHHcC
Confidence 455555554 458889999999999999 46666666666665543
No 10
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=48.30 E-value=23 Score=20.87 Aligned_cols=41 Identities=5% Similarity=0.104 Sum_probs=33.0
Q ss_pred HHHHhcCCCCHHH-HHHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 88 MSNILDTGLDRHT-LSVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 88 IS~LLNTGLDReT-LsICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
|..|++=.++... =+++++|..+|.+++.++..++-+|+-.
T Consensus 26 ~~~i~~g~~~d~qi~afL~al~~kGet~~Ei~~~~~aMr~sG 67 (70)
T d2tpta1 26 INGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSG 67 (70)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTS
T ss_pred HHHHHcCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 4566777777765 5688899999999999999999988643
No 11
>d1p2fa1 a.4.6.1 (A:121-217) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=48.30 E-value=11 Score=22.88 Aligned_cols=49 Identities=12% Similarity=0.247 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCC
Q 040572 80 ESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSP 130 (142)
Q Consensus 80 EtLDiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a 130 (142)
.-+++|.-+..=-+.=++++.|.-.|- +..+++.+|-..|..||+....
T Consensus 29 ~E~~lL~~L~~~~g~vvsr~~l~~~vw--~~~~~~~~l~~~I~rLR~kl~~ 77 (97)
T d1p2fa1 29 KEFEILLFLAENAGKVVTREKLLETFW--EDPVSPRVVDTVIKRIRKAIED 77 (97)
T ss_dssp HHHHHHHHHHHTTTSCEEHHHHHHHHC--SSCCCTHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHhhhhhhhhhhhhhheeee--ecccCCcccccHHHHHHHHHhh
Confidence 446777777776677899999866654 5668999999999999987655
No 12
>d1yvwa1 a.204.1.4 (A:4-95) Phosphoribosyl-ATP pyrophosphatase HisE {Bacillus cereus [TaxId: 1396]}
Probab=47.54 E-value=19 Score=23.51 Aligned_cols=29 Identities=10% Similarity=0.298 Sum_probs=21.3
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHH
Q 040572 83 DLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAA 119 (142)
Q Consensus 83 DiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~ 119 (142)
++++|+++|| .-++|-|...||+|+.+..
T Consensus 55 ~~i~E~ADLl--------yHllVll~~~gi~~~dV~~ 83 (92)
T d1yvwa1 55 EVVKEMVDVF--------YHCFVLLAEKNIALEDVMR 83 (92)
T ss_dssp HHHHHHHHHH--------HHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHH--------HHHHHHHHHCCCCHHHHHH
Confidence 4566777765 4578899999999876544
No 13
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=45.70 E-value=25 Score=20.51 Aligned_cols=41 Identities=12% Similarity=0.232 Sum_probs=30.1
Q ss_pred HHHHhcCCCCHHHH-HHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 88 MSNILDTGLDRHTL-SVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 88 IS~LLNTGLDReTL-sICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
|..|++=.++...+ ++++.|-..|..++.|+..++-+|+-+
T Consensus 25 ~~~i~~g~~s~~qiaafL~al~~kGet~~Ei~g~~~amr~~~ 66 (70)
T d1o17a1 25 AKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELA 66 (70)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 44556667766655 467778888888888888888888754
No 14
>d1x91a_ a.29.6.1 (A:) Pectin methylesterase inhibitor 1, PMEI1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=45.39 E-value=19 Score=22.69 Aligned_cols=45 Identities=13% Similarity=0.227 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhcCCCCH---HHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 040572 80 ESLDLAFHMSNILDTGLDR---HTLSVLIALCDLGVNPEALAAVVKELQR 126 (142)
Q Consensus 80 EtLDiL~EIS~LLNTGLDR---eTLsICI~LcE~GVNPEALA~VIKELRr 126 (142)
.+-+.+..|+.|++.+.|. ..|..|+++.+..| +.|...+..|+.
T Consensus 44 ~a~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~~a~--~~L~~a~~~l~~ 91 (149)
T d1x91a_ 44 RATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAI--GNLEEAFEHLAS 91 (149)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHc
Confidence 3344455567777776665 77999999999887 467777777765
No 15
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.57 E-value=5.1 Score=27.68 Aligned_cols=46 Identities=20% Similarity=0.273 Sum_probs=33.2
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCC
Q 040572 85 AFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSP 130 (142)
Q Consensus 85 L~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a 130 (142)
..++..++=.|.|-.+-.++..|...+-||+.+..+-.||+.....
T Consensus 262 ~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~ 307 (463)
T d3czha1 262 IFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGP 307 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHhhhhccchhhhhhHHHhhccCcHHHHHHHHHHHhhcCC
Confidence 3344445555666666667777888888999999999999876543
No 16
>d1j8yf1 a.24.13.1 (F:3-86) Signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=42.23 E-value=14 Score=23.47 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=25.2
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhCCCC
Q 040572 101 LSVLIALCDLGVNPEALAAVVKELQREPSP 130 (142)
Q Consensus 101 LsICI~LcE~GVNPEALA~VIKELRrE~~a 130 (142)
-.|+.+|+|+-||-+-.-..+..++++...
T Consensus 28 ~eIr~ALLeADVn~~vv~~f~~~ik~k~~~ 57 (84)
T d1j8yf1 28 KELQKSLISADVNVKLVFSLTNKIKERLKN 57 (84)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHhh
Confidence 468999999999999999998888876543
No 17
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=41.59 E-value=5.9 Score=28.22 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=32.2
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhC
Q 040572 85 AFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQRE 127 (142)
Q Consensus 85 L~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE 127 (142)
..++-.+|-.|.|-.+-.++..|....-||+.++.+..||..-
T Consensus 243 ~~~~~~ll~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~ 285 (445)
T d2ciba1 243 TGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDEL 285 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccchhhccccccccccccccccccccccccc
Confidence 3444555556666677777777778888999999999999863
No 18
>d1aora1 a.110.1.1 (A:211-605) Aldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=41.13 E-value=23 Score=27.49 Aligned_cols=44 Identities=27% Similarity=0.435 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcC-CCCH-H---HHHHHHHHHhCCC---------------CHHHHHHHHHHHH
Q 040572 82 LDLAFHMSNILDT-GLDR-H---TLSVLIALCDLGV---------------NPEALAAVVKELQ 125 (142)
Q Consensus 82 LDiL~EIS~LLNT-GLDR-e---TLsICI~LcE~GV---------------NPEALA~VIKELR 125 (142)
++.+..+..|.|- |||- + +|+.+++|.|.|+ |++++..+|..|=
T Consensus 117 ~~~v~~~n~l~d~~GlDtIs~G~~ia~amE~~e~Gll~~e~~gd~~~l~wGd~e~~~~li~~IA 180 (395)
T d1aora1 117 LASIIEANHMCDELGLDTISTGGTLATAMELYEKGHIKDEELGDAPPFRWGNTEVLHYYIEKIA 180 (395)
T ss_dssp HHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSCHHHHTTSCCCCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccHHHHhHHHHHHHHHHHCCCCChhhcccCCCCCCCCHHHHHHHHHHHH
Confidence 4556667777777 9997 3 4888899999985 5677777777664
No 19
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=40.92 E-value=19 Score=22.40 Aligned_cols=42 Identities=12% Similarity=0.203 Sum_probs=28.8
Q ss_pred HHHHHh-cCCCCHHHHHHHHHHHhCC-C-----------CHHHHHHHHHHHHhCC
Q 040572 87 HMSNIL-DTGLDRHTLSVLIALCDLG-V-----------NPEALAAVVKELQREP 128 (142)
Q Consensus 87 EIS~LL-NTGLDReTLsICI~LcE~G-V-----------NPEALA~VIKELRrE~ 128 (142)
+|.+.| .-||+.....++..|++.| . ++-.+..+++.|-+..
T Consensus 8 ~l~~~L~~lGlt~~e~~v~~~L~~~g~~t~~eia~~~~i~~~~v~~~l~~L~~~G 62 (109)
T d1sfxa_ 8 ELVKALEKLSFKPSDVRIYSLLLERGGMRVSEIARELDLSARFVRDRLKVLLKRG 62 (109)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhcCCCCHHHHHHHhCCCcchHHHHHHHHHhCC
Confidence 444444 4699999999999999976 3 4445555666665543
No 20
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]}
Probab=40.63 E-value=13 Score=23.44 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=17.9
Q ss_pred hCCCCH-HHHHHHHHHHHhCCCC
Q 040572 109 DLGVNP-EALAAVVKELQREPSP 130 (142)
Q Consensus 109 E~GVNP-EALA~VIKELRrE~~a 130 (142)
+.|+|| .+++.+|.+|......
T Consensus 20 ~~g~NpI~~~~~~i~~l~~~~~~ 42 (113)
T d1vgya2 20 HLAINPVHTFAPALLELTQEVWD 42 (113)
T ss_dssp GGCBCHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCcHHHHHHHHHHHHhhhcc
Confidence 579999 5899999999876544
No 21
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}
Probab=39.46 E-value=38 Score=20.82 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=26.4
Q ss_pred cCC-CCHHHHHHHHHH-----HhCCCCHHHHHHHHHHHH
Q 040572 93 DTG-LDRHTLSVLIAL-----CDLGVNPEALAAVVKELQ 125 (142)
Q Consensus 93 NTG-LDReTLsICI~L-----cE~GVNPEALA~VIKELR 125 (142)
|.| |+++-|.-++.- +...++++.+..+++++=
T Consensus 24 ~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D 62 (93)
T d3c1va1 24 DKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLD 62 (93)
T ss_dssp STTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHC
T ss_pred CCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHc
Confidence 456 999999988854 566789999999888864
No 22
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=39.42 E-value=14 Score=21.32 Aligned_cols=17 Identities=12% Similarity=0.423 Sum_probs=8.3
Q ss_pred CCCHHHHHHHHHHHHhC
Q 040572 111 GVNPEALAAVVKELQRE 127 (142)
Q Consensus 111 GVNPEALA~VIKELRrE 127 (142)
|+++.++..-|+.|.++
T Consensus 28 ~ls~~~v~~Ri~~L~~~ 44 (60)
T d2cyya1 28 GLAESTIHERIRKLRES 44 (60)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHC
Confidence 44455555555555443
No 23
>d1khya_ a.174.1.1 (A:) N-terminal domain of ClpB (heat shock protein F84.1) {Escherichia coli [TaxId: 562]}
Probab=39.22 E-value=39 Score=20.84 Aligned_cols=17 Identities=12% Similarity=0.315 Sum_probs=14.7
Q ss_pred HHhCCCCHHHHHHHHHH
Q 040572 107 LCDLGVNPEALAAVVKE 123 (142)
Q Consensus 107 LcE~GVNPEALA~VIKE 123 (142)
|-+.|||++.|.+.|++
T Consensus 123 L~~~gi~~~~l~~~i~~ 139 (139)
T d1khya_ 123 LKAAGATTANITQAIEQ 139 (139)
T ss_dssp HHHTTCCHHHHHHHHHC
T ss_pred HHHcCCCHHHHHHHhcC
Confidence 67799999999998874
No 24
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=38.67 E-value=29 Score=21.15 Aligned_cols=61 Identities=15% Similarity=0.169 Sum_probs=42.8
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHh-cCCC---CH----HHHHHHHHHH-hCCCCHHHHHHHHHHHHhC
Q 040572 67 VDDMDPEAARTARESLDLAFHMSNIL-DTGL---DR----HTLSVLIALC-DLGVNPEALAAVVKELQRE 127 (142)
Q Consensus 67 ~~~md~d~~~aArEtLDiL~EIS~LL-NTGL---DR----eTLsICI~Lc-E~GVNPEALA~VIKELRrE 127 (142)
+|..|..-+..-.+-++++.+|+.+= +.|+ |. +-+.-+.+.. +.|++|+.+..+.++|-.+
T Consensus 10 ID~iD~~i~~Ll~~R~~l~~~I~~~K~~~~~~i~d~~RE~~il~~~~~~~~~~~l~~~~i~~i~~~ii~~ 79 (91)
T d1ecma_ 10 ISALDEKLLALLAERRELAVEVGKAKLLSHRPVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIED 79 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHhhcCCcCHHHHHHHHHHHHHH
Confidence 46677778888888899999999884 4565 33 2333444443 4589999998888877543
No 25
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}
Probab=38.59 E-value=11 Score=24.19 Aligned_cols=30 Identities=30% Similarity=0.449 Sum_probs=24.5
Q ss_pred CCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhC
Q 040572 95 GLDRHTLSVLIALCDLGVNPEALAAVVKELQRE 127 (142)
Q Consensus 95 GLDReTLsICI~LcE~GVNPEALA~VIKELRrE 127 (142)
|+.|.-.-+|.-|+..|++++. .|+.+|+.
T Consensus 99 G~gRsg~~~a~~l~~~~~~~~~---av~~vr~~ 128 (152)
T d1rxda_ 99 GLGRAPVLVALALIEGGMKYED---AVQFIRQK 128 (152)
T ss_dssp SSTTHHHHHHHHHHHTTCCHHH---HHHHHHTT
T ss_pred CcccHHHHHHHHHHHhCcCHHH---HHHHHHHh
Confidence 9999999999999999999885 45555543
No 26
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.27 E-value=21 Score=23.31 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Q 040572 80 ESLDLAFHMSNILDTGLDRHTLSVLIALCD 109 (142)
Q Consensus 80 EtLDiL~EIS~LLNTGLDReTLsICI~LcE 109 (142)
..+|-+++++.-+ ||+++|+-+.|.++|
T Consensus 45 ~lidW~~~v~~~~--~l~~et~~lAv~llD 72 (140)
T d1w98b2 45 ILLDWLMEVCEVY--KLHRETFYLAQDFFD 72 (140)
T ss_dssp HHHHHHHHHHHHT--TCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--CCChHHHHHHHHHHH
Confidence 6889999999865 799999999999988
No 27
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.63 E-value=44 Score=21.08 Aligned_cols=58 Identities=19% Similarity=0.226 Sum_probs=39.8
Q ss_pred CCCCCchhhhcccccccccCCCCHHHHHH-HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhC
Q 040572 49 SRPTTSSRQLQQPRESRLVDDMDPEAART-ARESLDLAFHMSNILDTGLDRHTLSVLIALCDL 110 (142)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~md~d~~~a-ArEtLDiL~EIS~LLNTGLDReTLsICI~LcE~ 110 (142)
++.-.+..||++. -|+ -|.|+.+.-.. -.+..+.+++++..|+ |+.+|+..++.|++.
T Consensus 3 ~~w~~t~~~l~~~-pS~-~~gi~~~~E~~~R~~~~~~i~~~~~~l~--l~~~t~~~A~~l~~R 61 (143)
T d2ivxa1 3 SRWFFTREQLENT-PSR-RCGVEADKELSCRQQAANLIQEMGQRLN--VSQLTINTAIVYMHR 61 (143)
T ss_dssp GGGSCCHHHHHSC-HHH-HTTCCHHHHHHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHhC-ccc-ccCCCHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHH
Confidence 4455556666652 133 56677765333 3467789999998885 889999999988763
No 28
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=36.22 E-value=25 Score=21.00 Aligned_cols=54 Identities=17% Similarity=0.346 Sum_probs=37.7
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhc-CC-CCHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 040572 67 VDDMDPEAARTARESLDLAFHMSNILD-TG-LDRHTLSVLIALCDLGVNPEALAAVVKEL 124 (142)
Q Consensus 67 ~~~md~d~~~aArEtLDiL~EIS~LLN-TG-LDReTLsICI~LcE~GVNPEALA~VIKEL 124 (142)
++.+..+..+..+++|+.+.. =+ .| ||..-|..++.-+...++.+.|..+|+++
T Consensus 6 ~~~ls~eq~~~~~~~F~~fD~----d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~ 61 (82)
T d1wrka1 6 VEQLTEEQKNEFKAAFDIFVL----GAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEV 61 (82)
T ss_dssp HHHCCHHHHHHHHHHHHHHTT----TCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTT
T ss_pred HhhCCHHHHHHHHHHHHHHcC----cCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 455666777777776665532 22 34 89999999887766677777788877765
No 29
>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]}
Probab=35.71 E-value=23 Score=23.35 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHh-CCCCHHHHHHH
Q 040572 96 LDRHTLSVLIALCD-LGVNPEALAAV 120 (142)
Q Consensus 96 LDReTLsICI~LcE-~GVNPEALA~V 120 (142)
-+.+++.++-.|++ +||+++.++.-
T Consensus 157 tt~~~~~~a~~L~~~~g~d~~~~~~~ 182 (187)
T d1wpna_ 157 CTDQDVAAAKELAEIAGVDAEEYGLN 182 (187)
T ss_dssp CCHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 47899999999999 59999988654
No 30
>d1yxba1 a.204.1.4 (A:4-91) Phosphoribosyl-ATP pyrophosphatase HisE {Streptomyces coelicolor [TaxId: 1902]}
Probab=34.74 E-value=33 Score=22.22 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=21.9
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHH
Q 040572 83 DLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAA 119 (142)
Q Consensus 83 DiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~ 119 (142)
++++|+++|| .-++|-|...||+|+.+..
T Consensus 57 ~~i~EaADLl--------yHllVll~~~gi~~~dV~~ 85 (88)
T d1yxba1 57 AAAEEISQLL--------YHVQVMMVARGISLDDVYA 85 (88)
T ss_dssp HHHHHHHHHH--------HHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHH--------HHHHHHHHHCCCCHHHHHH
Confidence 3567777776 4578899999999987543
No 31
>d1d4ca3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}
Probab=34.49 E-value=8.7 Score=25.29 Aligned_cols=13 Identities=31% Similarity=0.319 Sum_probs=6.9
Q ss_pred CCCHHHHHHHHHH
Q 040572 111 GVNPEALAAVVKE 123 (142)
Q Consensus 111 GVNPEALA~VIKE 123 (142)
|+++++|.+-|.+
T Consensus 95 gid~~~L~~Tv~~ 107 (146)
T d1d4ca3 95 DVPAAELAKTVTA 107 (146)
T ss_dssp TCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5555555555543
No 32
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=32.72 E-value=24 Score=22.51 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=27.8
Q ss_pred CCCHHHH-----HHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 95 GLDRHTL-----SVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 95 GLDReTL-----sICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
-||.+.+ .|+.+|+|+-||-+.....+..+++.+
T Consensus 21 ~i~E~~i~~~l~eir~ALLeADV~l~vvk~f~~~ik~k~ 59 (88)
T d1ls1a1 21 RITEEDLKATLREIRRALMDADVNLEVARDFVERVREEA 59 (88)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHH
Confidence 3566655 578899999999999999999998764
No 33
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=31.81 E-value=35 Score=19.58 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=15.2
Q ss_pred CCHHHHHHHHHHHhCCCCHHHHHHH
Q 040572 96 LDRHTLSVLIALCDLGVNPEALAAV 120 (142)
Q Consensus 96 LDReTLsICI~LcE~GVNPEALA~V 120 (142)
|+.+.+.-.-+|+++|.....+|..
T Consensus 6 lt~~q~~~a~~l~~~G~s~~~iA~~ 30 (47)
T d1ijwc_ 6 INKHEQEQISRLLEKGHPRQQLAII 30 (47)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHH
Confidence 4555666666666666666655543
No 34
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.52 E-value=11 Score=26.52 Aligned_cols=47 Identities=11% Similarity=0.189 Sum_probs=34.6
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCC
Q 040572 84 LAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSP 130 (142)
Q Consensus 84 iL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a 130 (142)
+..++-.++-.|.|-.+-.++..|.....||+.+..+-.||+.....
T Consensus 268 i~~~~l~l~~Ag~~tta~~l~~~l~~L~~~Pe~~~klr~Ei~~~~~~ 314 (472)
T d1tqna_ 268 LVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 314 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSTT
T ss_pred HHhhhhhhhhcccccccccceeeccccccCccccccccceeheeccc
Confidence 34445555666777777777777888888999999999998875543
No 35
>d1gxqa_ a.4.6.1 (A:) PhoB {Escherichia coli [TaxId: 562]}
Probab=31.13 E-value=19 Score=22.40 Aligned_cols=52 Identities=12% Similarity=0.142 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCC
Q 040572 79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSP 130 (142)
Q Consensus 79 rEtLDiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a 130 (142)
..-+++|.-+..=-+--++++.|.-.|-=-+..++..+|-..|..||+....
T Consensus 33 ~~E~~lL~~L~~~~g~vvsr~~L~~~vw~~~~~~~~~~l~~~I~rLRkKl~~ 84 (105)
T d1gxqa_ 33 PTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEP 84 (105)
T ss_dssp HHHHHHHHHHHHSCSSEECHHHHHHHHTCSSSCCCTHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhCccccccHHHHhccccCCCCCCCCcchHHHHHHHHHHhcc
Confidence 3456777777777777899998876665446678999999999999997644
No 36
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Probab=30.15 E-value=20 Score=25.46 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 040572 84 LAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQ 125 (142)
Q Consensus 84 iL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELR 125 (142)
+...+-.+|-.|.|-.+..+...|...+-||+-.+++..|+.
T Consensus 211 i~~~~~~~l~ag~dTt~~~l~~~l~~L~~~P~v~~~l~~E~~ 252 (385)
T d1n97a_ 211 ALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEE 252 (385)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhhhccchhhhhhhhhHhhhhcccccccccccc
Confidence 444555667778888888888888999999998887766554
No 37
>d2qw6a1 a.80.1.2 (A:241-328) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=29.73 E-value=54 Score=21.48 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHH-----HhCC-CCHHHHHHHHHH
Q 040572 84 LAFHMSNILDTGLDRHTLSVLIAL-----CDLG-VNPEALAAVVKE 123 (142)
Q Consensus 84 iL~EIS~LLNTGLDReTLsICI~L-----cE~G-VNPEALA~VIKE 123 (142)
.||.++.+|+.| |... |+=.| =|-| .||.||..++.-
T Consensus 19 Alywlarml~~G-D~~~--i~RRLi~~AsEDIGlAdp~al~~~~~a 61 (88)
T d2qw6a1 19 ALHYLARLVEAG-DLAS--ICRRLMVIGYEDIGLGNPAAAARTVNA 61 (88)
T ss_dssp HHHHHHHHHHTT-CHHH--HHHHHHHHHHHTC---CHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-ChhH--HHHHHHHHHHHHhhccChHHHHHHHHH
Confidence 489999999999 9764 44444 3667 499999877654
No 38
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=29.18 E-value=52 Score=20.88 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=22.0
Q ss_pred HHHHHhcCCCC-HHHH-HHHHHHHhCCC-----------CHHHHHHHHH
Q 040572 87 HMSNILDTGLD-RHTL-SVLIALCDLGV-----------NPEALAAVVK 122 (142)
Q Consensus 87 EIS~LLNTGLD-ReTL-sICI~LcE~GV-----------NPEALA~VIK 122 (142)
+|++++ |++ |+|. .++=+|-+.|+ |++.|.+...
T Consensus 36 eLA~~l--G~s~ReTVsR~L~~L~~~GlI~~~~~~i~I~D~~~L~~~A~ 82 (100)
T d2bgca1 36 ELGYSS--GIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAP 82 (100)
T ss_dssp HHHHHT--TCCCHHHHHHHHHHHHHTTSEEEETTEEEESCHHHHHHHCH
T ss_pred HHHHHh--CCchHHHHHHHHHHHHHCCCEEEcCCEEEEeCHHHHHHHhc
Confidence 555553 664 7776 56667777776 7777766543
No 39
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=29.12 E-value=41 Score=21.69 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHh-----CCCCHHH
Q 040572 79 RESLDLAFHMSNILDTGLDRHTLSVLIALCD-----LGVNPEA 116 (142)
Q Consensus 79 rEtLDiL~EIS~LLNTGLDReTLsICI~LcE-----~GVNPEA 116 (142)
...+|-+++++.-+ ||+.+|+-+.|.++| ..|+++.
T Consensus 37 ~~lidWl~~v~~~~--~l~~et~~lAv~llDrfls~~~v~~~~ 77 (132)
T d1g3nc1 37 KLLGTWMFSVCQEY--NLEPNVVALALNLLDRLLLIKQVSKEH 77 (132)
T ss_dssp HHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHTTTCCCCHHH
T ss_pred HHHHHHHHHHHHHh--CCCcchHHHHHHHHHHHcCcccCcHHH
Confidence 36778888988755 789999999999998 3455554
No 40
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=28.97 E-value=19 Score=21.27 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=24.5
Q ss_pred hcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCC
Q 040572 92 LDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129 (142)
Q Consensus 92 LNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~ 129 (142)
++..++++.|+-.+ |++++.+..++++|+++.-
T Consensus 27 i~~~~t~~eiA~~l-----G~sretvsr~l~~l~~~g~ 59 (80)
T d1ft9a1 27 VSVDFTVEEIANLI-----GSSRQTTSTALNSLIKEGY 59 (80)
T ss_dssp CEECCCHHHHHHHH-----CSCHHHHHHHHHHHHHTTS
T ss_pred EecCCCHHHHHHHH-----CCCHHHHHHHHHHHHHCCC
Confidence 34566777777654 8888888888888888754
No 41
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=28.72 E-value=13 Score=26.55 Aligned_cols=46 Identities=22% Similarity=0.263 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 83 DLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 83 DiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
+++.++..++-.|.|-.+..++..|....-+|+.+..+..|+....
T Consensus 251 ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~ 296 (453)
T d2ij2a1 251 NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 296 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred HHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhhhh
Confidence 3555566666667777777777777777789998888888877643
No 42
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=28.71 E-value=27 Score=22.66 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhC
Q 040572 80 ESLDLAFHMSNILDTGLDRHTLSVLIALCDL 110 (142)
Q Consensus 80 EtLDiL~EIS~LLNTGLDReTLsICI~LcE~ 110 (142)
..+|-+++++.-+ ||+.+|+-+.|.|+|.
T Consensus 33 ~lidWl~~v~~~~--~l~~eTl~lAv~llDr 61 (127)
T d1bu2a1 33 ILLTWMHLLCESF--ELDKSVFPLSVSILDR 61 (127)
T ss_dssp HHHHHHHHHHHHT--TCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--CCChHHHHHHHHHHHH
Confidence 5689999998866 7999999999999984
No 43
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=28.13 E-value=53 Score=19.07 Aligned_cols=41 Identities=12% Similarity=0.147 Sum_probs=31.3
Q ss_pred HHHHhcCCCCHHH-HHHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 88 MSNILDTGLDRHT-LSVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 88 IS~LLNTGLDReT-LsICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
|..|++=.++... =+++++|...|.+++.++..++-+|.-.
T Consensus 25 ~~~i~~g~~s~~qi~afL~al~~kG~t~~Ei~~~~~aM~~sg 66 (70)
T d1brwa1 25 VRGYTNGDIPDYQMSALAMAIYFRGMTEEETAALTMAMVQSG 66 (70)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 4556777776644 4678888899999999999999888743
No 44
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=28.02 E-value=58 Score=19.95 Aligned_cols=60 Identities=15% Similarity=0.357 Sum_probs=41.2
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHh-cCC-CCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 65 RLVDDMDPEAARTARESLDLAFHMSNIL-DTG-LDRHTLSVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 65 ~~~~~md~d~~~aArEtLDiL~EIS~LL-NTG-LDReTLsICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
..|+.|..+..+.-+++|+.+- .= ++| |+.+-+..++.-+...+++..+-.++..+-...
T Consensus 3 ~~~~~Lt~~~~~~l~~~F~~~D----~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 64 (156)
T d1dtla_ 3 AAVEQLTEEQKNEFKAAFDIFV----LGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 64 (156)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHT----TTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTS
T ss_pred HHHHHCCHHHHHHHHHHHHHHc----CCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccC
Confidence 3577788887776666664432 22 344 899999999888777777777777777665443
No 45
>d1y0pa3 d.168.1.1 (A:362-504) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}
Probab=27.68 E-value=15 Score=24.11 Aligned_cols=23 Identities=26% Similarity=0.343 Sum_probs=13.1
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHH
Q 040572 100 TLSVLIALCDLGVNPEALAAVVKEL 124 (142)
Q Consensus 100 TLsICI~LcE~GVNPEALA~VIKEL 124 (142)
||.=+-+.| |++|++|.+-|.+-
T Consensus 85 tleeLA~~~--gid~~~L~~Tv~~y 107 (143)
T d1y0pa3 85 SLVKLGKME--GIDGKALTETVARY 107 (143)
T ss_dssp SHHHHHHHH--TSCHHHHHHHHHHH
T ss_pred cHHHHHHHh--CCCHHHHHHHHHHH
Confidence 444444433 67777777666654
No 46
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=27.46 E-value=28 Score=22.92 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Q 040572 79 RESLDLAFHMSNILDTGLDRHTLSVLIALCD 109 (142)
Q Consensus 79 rEtLDiL~EIS~LLNTGLDReTLsICI~LcE 109 (142)
...+|-+++++.-+ ||+++|+-+.|.++|
T Consensus 45 ~~lvdWm~~v~~~~--~l~~etl~lAv~llD 73 (141)
T d1f5qb1 45 KVLTTWMFCVCKDL--RQDNNVFPLAVALLD 73 (141)
T ss_dssp HHHHHHHHHHHHHT--TCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--CCChHHHHHHHHHHH
Confidence 35778888888877 699999999999988
No 47
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=26.95 E-value=21 Score=25.65 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHHhCCCCHHHHHHH
Q 040572 96 LDRHTLSVLIALCDLGVNPEALAAV 120 (142)
Q Consensus 96 LDReTLsICI~LcE~GVNPEALA~V 120 (142)
|-.+-|.-|.+|++.|+||..+...
T Consensus 95 La~~ll~~~~~li~~G~~p~~i~~g 119 (258)
T d1q3qa1 95 IAGELLRKAEELLDQNIHPSIITKG 119 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hHHHHHhhhHHHHhcCCChhHHHHH
Confidence 4456688899999999999877443
No 48
>d2cj4a1 a.29.6.1 (A:4-150) Invertase inhibitor {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=26.93 E-value=38 Score=21.33 Aligned_cols=46 Identities=11% Similarity=0.120 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 040572 79 RESLDLAFHMSNILDTGLD---RHTLSVLIALCDLGVNPEALAAVVKELQ 125 (142)
Q Consensus 79 rEtLDiL~EIS~LLNTGLD---ReTLsICI~LcE~GVNPEALA~VIKELR 125 (142)
..+-+.+..|+.|++.+.| +..|..|+++.+..|+- .|...+..|+
T Consensus 45 ~~a~~~~~~i~~l~~~~~~~~~~~al~~C~e~y~~av~~-~l~~a~~~l~ 93 (147)
T d2cj4a1 45 AKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTA-SLPEAIEALT 93 (147)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGHHHHHHHHHHHHHHHHT-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 3444556677777766555 57999999999876642 2444444443
No 49
>d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=26.71 E-value=16 Score=23.36 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=18.0
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHH
Q 040572 100 TLSVLIALCDLGVNPEALAAVVKELQ 125 (142)
Q Consensus 100 TLsICI~LcE~GVNPEALA~VIKELR 125 (142)
.|..+..+...|++++++...|++++
T Consensus 188 alaAia~~~~lgi~~~~i~~~l~~fk 213 (214)
T d1gg4a4 188 ALAAAALSMSVGATLDAIKAGLANLK 213 (214)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 34444445678999999988887653
No 50
>d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.52 E-value=34 Score=21.32 Aligned_cols=60 Identities=10% Similarity=0.145 Sum_probs=37.5
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcC-C--CC----HHHHHHHHHH-HhCCCCHHHHHHHHHHHHh
Q 040572 67 VDDMDPEAARTARESLDLAFHMSNILDT-G--LD----RHTLSVLIAL-CDLGVNPEALAAVVKELQR 126 (142)
Q Consensus 67 ~~~md~d~~~aArEtLDiL~EIS~LLNT-G--LD----ReTLsICI~L-cE~GVNPEALA~VIKELRr 126 (142)
+|..|.+-+.--.+-++++.+|+.+=.- | +| ++-+.-+.++ .+.|++|+.+..+.+.|-.
T Consensus 17 ID~ID~~i~~LL~~R~~l~~~i~~~K~~~~~v~d~~Re~~vl~~~~~~a~~~gl~~~~i~~i~~~ii~ 84 (94)
T d2h9da1 17 IDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIH 84 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTC----------CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcHHHHHHHHHHHHHHHhhCCcCHHHHHHHHHHHHH
Confidence 4566667777777777777777766321 1 11 2344455555 4568999998888887754
No 51
>d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]}
Probab=26.36 E-value=15 Score=26.53 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=28.2
Q ss_pred CCCHH----HHHHHHHHHhCCCCHHH--HHHHHHHHHhCCCC
Q 040572 95 GLDRH----TLSVLIALCDLGVNPEA--LAAVVKELQREPSP 130 (142)
Q Consensus 95 GLDRe----TLsICI~LcE~GVNPEA--LA~VIKELRrE~~a 130 (142)
|..|. +|.+|+.+++.+-++.. +..+|+.||+....
T Consensus 217 G~gRtGtf~ald~~~~~l~~~~~~~~vdV~~~v~~lR~qR~~ 258 (297)
T d2f71a1 217 GIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMG 258 (297)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHTTTSTT
T ss_pred ccCceehhHHHHHHHHHHHhhcCCCccCHHHHHHHHHhhccc
Confidence 88888 67778888887766553 88999999987644
No 52
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=25.71 E-value=25 Score=20.46 Aligned_cols=29 Identities=17% Similarity=0.178 Sum_probs=18.3
Q ss_pred CCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 95 GLDRHTLSVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 95 GLDReTLsICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
-|+++.|+-+ .|+.++.+..++++|+++.
T Consensus 29 ~lt~~eLA~~-----~G~sretvsr~L~~l~~~g 57 (81)
T d2gaua1 29 YLSREELATL-----SNMTVSNAIRTLSTFVSER 57 (81)
T ss_dssp CCCHHHHHHH-----TTSCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHH-----HCCCHHHHHHHHHHHHHCC
Confidence 3556665544 3677777777777777664
No 53
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=25.62 E-value=37 Score=21.54 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 040572 97 DRHTLSVLIALCDLGVNPEALAAVVKELQR 126 (142)
Q Consensus 97 DReTLsICI~LcE~GVNPEALA~VIKELRr 126 (142)
|++.+.++..++...=|.+-....|..|+|
T Consensus 246 ~~~~~~~L~~~l~~~~d~~vr~~A~~~L~k 275 (276)
T d1oyza_ 246 DKTLLPVLDTMLYKFDDNEIITSAIDKLKR 275 (276)
T ss_dssp CGGGHHHHHHHHTTSSCCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHccCCCHHHHHHHHHHHcc
Confidence 455666666666555566666666666554
No 54
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=25.38 E-value=25 Score=20.67 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=24.9
Q ss_pred hcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCC
Q 040572 92 LDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129 (142)
Q Consensus 92 LNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~ 129 (142)
++..|+++.|+-.+ |+.++.+..++++|+++.-
T Consensus 27 i~~~lt~~elA~~~-----g~sretvsr~l~~l~~~gl 59 (80)
T d3e5ua1 27 ITMPLSQKSIGEIT-----GVHHVTVSRVLASLKRENI 59 (80)
T ss_dssp CCSCCCHHHHHHHH-----TCCHHHHHHHHHHHHHTTS
T ss_pred EeeCCCHHHHHHHH-----CCCHHHHHHHHHHHHHCCc
Confidence 34567777777654 8888888888888888753
No 55
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=25.02 E-value=72 Score=19.52 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=21.8
Q ss_pred cCCCCHHHHHHHHHHHhC-C--CCHHHHHHH
Q 040572 93 DTGLDRHTLSVLIALCDL-G--VNPEALAAV 120 (142)
Q Consensus 93 NTGLDReTLsICI~LcE~-G--VNPEALA~V 120 (142)
..||+...+.++..|+++ | +++..|+..
T Consensus 24 ~~glt~~q~~vL~~l~~~~~~~it~~ela~~ 54 (135)
T d3broa1 24 KYDLTGTQMTIIDYLSRNKNKEVLQRDLESE 54 (135)
T ss_dssp TTTCCHHHHHHHHHHHHTTTSCCBHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHcCCCCCCHHHHHHH
Confidence 459999999999999975 3 776666654
No 56
>d1opca_ a.4.6.1 (A:) OmpR {Escherichia coli [TaxId: 562]}
Probab=25.00 E-value=14 Score=22.55 Aligned_cols=52 Identities=12% Similarity=0.087 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCCC
Q 040572 80 ESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSPS 131 (142)
Q Consensus 80 EtLDiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a~ 131 (142)
.-+++|.-+..=-+--++++.|.-.|-=-+..++..+|...|..||+.....
T Consensus 28 ~E~~lL~~L~~~~g~~vsr~~L~~~vwg~~~~~~~~~l~~~I~rLRkkl~~~ 79 (99)
T d1opca_ 28 GEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEED 79 (99)
T ss_dssp HHHHHHHHHHHSTTCCEEHHHHHHHHCCSSSCTTSSCHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHhccceeccHHHHHHHhcCCccccccccHHHHHHHHHHHHhhC
Confidence 3366777666666777888887555543355678889999999999977664
No 57
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.94 E-value=56 Score=21.73 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHh--CCCCHHHHHHHHHHHHh
Q 040572 95 GLDRHTLSVLIALCD--LGVNPEALAAVVKELQR 126 (142)
Q Consensus 95 GLDReTLsICI~LcE--~GVNPEALA~VIKELRr 126 (142)
|+.|.-+-+|.-|+. .|.+++.--+.|++.|.
T Consensus 119 G~gRtg~v~~~~Li~~~~~~~~~~Ai~~vr~~R~ 152 (176)
T d1fpza_ 119 GLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRG 152 (176)
T ss_dssp SSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHC
T ss_pred CCCchHHHHHHHHHHHhcCCCHHHHHHHHHHhCC
Confidence 999999998888886 58999887778888884
No 58
>d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.92 E-value=67 Score=24.80 Aligned_cols=43 Identities=14% Similarity=0.328 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcC-CCCHH----HHHHHHHHHhCCC--------CHHHHHHHHHHH
Q 040572 82 LDLAFHMSNILDT-GLDRH----TLSVLIALCDLGV--------NPEALAAVVKEL 124 (142)
Q Consensus 82 LDiL~EIS~LLNT-GLDRe----TLsICI~LcE~GV--------NPEALA~VIKEL 124 (142)
++.+..+..|.|- |||-= +++.+++|-|.|+ |++++.++|..|
T Consensus 112 ~~~v~~~n~lcd~~GlDtIs~G~~ia~amE~~e~Gll~~~~~~Gd~e~~~~ll~~I 167 (409)
T d1b25a1 112 LNEVSVLNRIADEMGMDTISLGVSIAHVMEAVERGILKEGPTFGDFKGAKQLALDI 167 (409)
T ss_dssp HHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSSSSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCchhhhhhHHHHHHHHHHCCCCCccccCCChHHHHHHHHHH
Confidence 3444555566666 99864 6778899999997 678888888776
No 59
>d2bgxa1 a.20.1.1 (A:180-260) Probable N-acetylmuramoyl-L-alanine amidase YbjR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.44 E-value=15 Score=23.47 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=20.5
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHh
Q 040572 86 FHMSNILDTGLDRHTLSVLIALCD 109 (142)
Q Consensus 86 ~EIS~LLNTGLDReTLsICI~LcE 109 (142)
|--.+++|=-+|.||+.|+-+|++
T Consensus 54 hFRp~~i~G~~D~Et~~Il~~L~~ 77 (81)
T d2bgxa1 54 HFRPTLYNGEADAETQAIAEALLE 77 (81)
T ss_dssp HHCTTCCSSCCBHHHHHHHHHHHH
T ss_pred HccccccCCcCCHHHHHHHHHHHH
Confidence 345677899999999999999987
No 60
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=23.14 E-value=28 Score=20.74 Aligned_cols=29 Identities=14% Similarity=0.145 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCC
Q 040572 96 LDRHTLSVLIALCDLGVNPEALAAVVKELQREPS 129 (142)
Q Consensus 96 LDReTLsICI~LcE~GVNPEALA~VIKELRrE~~ 129 (142)
++++.|+-++ |+.++.+..++++|+++.-
T Consensus 28 lt~~elA~~l-----g~sr~tvsr~l~~l~~~g~ 56 (73)
T d1zyba1 28 VKMDDLARCL-----DDTRLNISKTLNELQDNGL 56 (73)
T ss_dssp CCHHHHHHHH-----TSCHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHH-----CCCHHHHHHHHHHHHHCCC
Confidence 4455444433 6777777777777777653
No 61
>d1ys7a1 a.4.6.1 (A:128-233) Transcriptional regulatory protein PrrA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.69 E-value=39 Score=20.82 Aligned_cols=52 Identities=17% Similarity=0.223 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCC
Q 040572 79 RESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSP 130 (142)
Q Consensus 79 rEtLDiL~EIS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a 130 (142)
..-+++|.-+..=-+--++++.|.-.|-=-+.-++..+|-..|..||+..+.
T Consensus 35 ~~E~~lL~~L~~~~g~~vsr~~L~~~vw~~~~~~~~~~l~~~I~rLRkkl~~ 86 (106)
T d1ys7a1 35 KREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA 86 (106)
T ss_dssp HHHHHHHHHHHHTTTCCBCHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHC
T ss_pred HHHhHHHHHHhhhhhhhhhHHHHHhhhcCCCCCCCchhHHHHHHHHHHHhcc
Confidence 3557777777777788899998866664334446667899999999987643
No 62
>d2ev0a2 a.76.1.1 (A:63-136) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=22.17 E-value=78 Score=18.93 Aligned_cols=28 Identities=7% Similarity=0.093 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHHhCCCCHHHHHHHHH
Q 040572 95 GLDRHTLSVLIALCDLGVNPEALAAVVK 122 (142)
Q Consensus 95 GLDReTLsICI~LcE~GVNPEALA~VIK 122 (142)
|+|.+...--...+|..++|+.+..+.+
T Consensus 26 g~~~~~a~~~A~~iEH~is~~~~~~l~~ 53 (74)
T d2ev0a2 26 GVDEEKIYNDVEGIEHHLSWNSIDRIGD 53 (74)
T ss_dssp TCCHHHHHHHHHHHGGGCCHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHhcCCHHHHHHHHH
Confidence 8888888777778899998887555443
No 63
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.61 E-value=32 Score=20.26 Aligned_cols=18 Identities=17% Similarity=0.086 Sum_probs=13.3
Q ss_pred HHHHHHHHhCCCCHHHHH
Q 040572 101 LSVLIALCDLGVNPEALA 118 (142)
Q Consensus 101 LsICI~LcE~GVNPEALA 118 (142)
...+|.++++|++|+.+=
T Consensus 53 ~~~ii~~l~~~~~P~~IC 70 (74)
T d1l9la_ 53 QSRVIQGLVAGETAQQIC 70 (74)
T ss_dssp HHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHH
Confidence 445678888899988763
No 64
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=21.50 E-value=76 Score=19.65 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=18.8
Q ss_pred cCCCCHHHHHHHHHHHhCC-CCHHHHHH
Q 040572 93 DTGLDRHTLSVLIALCDLG-VNPEALAA 119 (142)
Q Consensus 93 NTGLDReTLsICI~LcE~G-VNPEALA~ 119 (142)
+.||......++..|.+.| +++..||.
T Consensus 25 ~~glt~~q~~iL~~i~~~~~~t~~~la~ 52 (139)
T d2a61a1 25 DFGITPAQFDILQKIYFEGPKRPGELSV 52 (139)
T ss_dssp HHTCCHHHHHHHHHHHHHCCBCHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHcCCCCHHHHHH
Confidence 3488888888888887774 55554443
No 65
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}
Probab=21.19 E-value=22 Score=23.15 Aligned_cols=24 Identities=29% Similarity=0.286 Sum_probs=16.4
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Q 040572 101 LSVLIALCDLGVNPEALAAVVKEL 124 (142)
Q Consensus 101 LsICI~LcE~GVNPEALA~VIKEL 124 (142)
|..+.-+.+.||+++.+.+.++.+
T Consensus 209 laAiava~~lGi~~~~i~~~l~~f 232 (234)
T d1e8ca3 209 LLALATLLALGYPLADLLKTAARL 232 (234)
T ss_dssp HHHHHHHHHTTCCHHHHHHHGGGC
T ss_pred HHHHHHHHHcCCCHHHHHHHHhhC
Confidence 334444557899999988877654
No 66
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.08 E-value=22 Score=24.59 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=29.1
Q ss_pred HHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 040572 90 NILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREP 128 (142)
Q Consensus 90 ~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~ 128 (142)
.++=.|.|-.+-.++..|.....||+.+..+-.||..-.
T Consensus 268 ~~~~Ag~dTTa~~l~~~l~~L~~~p~~~~~l~~Ei~~~~ 306 (467)
T d1r9oa_ 268 DLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVI 306 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHcccccchhHHHHHHHHhhcCchHHHHHHhhhhhhc
Confidence 344445555666777788888899999999999988654
No 67
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.86 E-value=1e+02 Score=19.67 Aligned_cols=16 Identities=13% Similarity=0.268 Sum_probs=9.3
Q ss_pred HHhCCCCHHHHHHHHH
Q 040572 107 LCDLGVNPEALAAVVK 122 (142)
Q Consensus 107 LcE~GVNPEALA~VIK 122 (142)
.+.+|+.++.|.++|.
T Consensus 80 Al~~G~t~eEi~e~~~ 95 (119)
T d2af7a1 80 ALNAGCSKDEIIEVMI 95 (119)
T ss_dssp HHHTTCCHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHH
Confidence 3456666666665554
No 68
>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]}
Probab=20.72 E-value=2.5 Score=26.98 Aligned_cols=11 Identities=9% Similarity=0.295 Sum_probs=5.9
Q ss_pred cccccccccCC
Q 040572 59 QQPRESRLVDD 69 (142)
Q Consensus 59 ~~~~~~~~~~~ 69 (142)
......-|+|+
T Consensus 29 ~~~~~~iliD~ 39 (207)
T d1ztca1 29 EHKDRRIIIDP 39 (207)
T ss_dssp EETTEEEEECC
T ss_pred EECCeEEEEeC
Confidence 44445556665
No 69
>d1y14a_ a.60.8.2 (A:) RNA polymerase II subunit RBP4 (RpoF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.41 E-value=1.1e+02 Score=21.83 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=44.3
Q ss_pred cccCCCCHHHHHHHHHHHHH----HHHHHHHhcCC-CCHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 040572 65 RLVDDMDPEAARTARESLDL----AFHMSNILDTG-LDRHTLSVLIALCDLGVNPEALAAVVKELQR 126 (142)
Q Consensus 65 ~~~~~md~d~~~aArEtLDi----L~EIS~LLNTG-LDReTLsICI~LcE~GVNPEALA~VIKELRr 126 (142)
++...-+++.+++.++.|.- =|||++|.|.+ =|.+-+..+|--++..++-+.|..++.+|++
T Consensus 105 ~Fsk~k~~es~~~vrelL~~~~L~~fE~a~L~NLcPet~eEAkaLiPSL~~k~~de~Lq~IL~~L~~ 171 (176)
T d1y14a_ 105 NFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSN 171 (176)
T ss_dssp HHCSCCSHHHHHHHHHHHHTTTCCHHHHHHHHHSCCSSHHHHHHHSGGGTTTSCHHHHHHHHHHHHH
T ss_pred HhccCCCHHHHHHHHHHHHhcCCCHHHHHHhhccCCCCHHHHHHHhhhhcccCCHHHHHHHHHHHHH
Confidence 34444577888888888873 46777777764 3456666666666777888999999998875
No 70
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.38 E-value=2.5 Score=29.83 Aligned_cols=22 Identities=27% Similarity=0.531 Sum_probs=8.4
Q ss_pred cCCCCHHHHHHHHHHHhCCCCH
Q 040572 93 DTGLDRHTLSVLIALCDLGVNP 114 (142)
Q Consensus 93 NTGLDReTLsICI~LcE~GVNP 114 (142)
|||....+=.+.-+|.+.|++|
T Consensus 38 D~G~~~~~~~~~~~l~~~~~~~ 59 (298)
T d2q0ia1 38 EGGISRDAELVWADLCRWVADP 59 (298)
T ss_dssp CCCCGGGHHHHHHHHHHHCSCG
T ss_pred cCCCCchHHHHHHHHHHcCCCc
Confidence 3443333333333344444433
No 71
>d1b0nb_ a.34.1.1 (B:) SinI anti-repressor {Bacillus subtilis [TaxId: 1423]}
Probab=20.18 E-value=70 Score=17.59 Aligned_cols=26 Identities=15% Similarity=0.383 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHHHHhCCCCHHHHHHH
Q 040572 95 GLDRHTLSVLIALCDLGVNPEALAAV 120 (142)
Q Consensus 95 GLDReTLsICI~LcE~GVNPEALA~V 120 (142)
.||.|=..+.++--|+.+.||.+.+.
T Consensus 2 eldqewvelmveakeanispeeirky 27 (31)
T d1b0nb_ 2 ELDQEWVELMVEAKEANISPEEIRKY 27 (31)
T ss_dssp CCCHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 47889999999999999999987654
No 72
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.14 E-value=83 Score=18.47 Aligned_cols=50 Identities=18% Similarity=0.193 Sum_probs=31.6
Q ss_pred HHHHhcCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 040572 88 MSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELQREPSPSPPMSTAPSS 140 (142)
Q Consensus 88 IS~LLNTGLDReTLsICI~LcE~GVNPEALA~VIKELRrE~~a~~~~~~~p~~ 140 (142)
|.+|++=|.+++.-...+..+. =|+|+=++.|.+=-.+..... ++..|+|
T Consensus 13 v~~L~~MGF~~~~a~~AL~~~~--~~~e~A~~wL~~~~~~~~~~~-p~~~pss 62 (63)
T d1wjia_ 13 LKHITEMGFSKEASRQALMDNG--NNLEAALNVLLTSNKQKPVMG-PPSGPSS 62 (63)
T ss_dssp HHHHHTTTCCHHHHHHHHHHTT--SCHHHHHHHHHHHSSCCCCCS-SCCCSSC
T ss_pred HHHHHHcCCCHHHHHHHHHHhC--CCHHHHHHHHHHCCCCCCccC-CCCCCCC
Confidence 6678888999998887766664 388876666655333332222 3445554
Done!