BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040576
(641 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/633 (66%), Positives = 513/633 (81%), Gaps = 6/633 (0%)
Query: 1 MSVRLKFTKTTE--ASLSLDKFIKSQKNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSH 58
M VR K + T +SLSL+KF+KS+KNL K PP+LW++ + D+Q LPI+ LSH
Sbjct: 1 MGVRFKPSHPTVRLSSLSLEKFLKSRKNLFKAPPRLWSDHGH-GLPEEDDQPLPILKLSH 59
Query: 59 PILQKLESC-STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
PIL+ LESC + KEF+QIHTQL+VSGL Q AA R +K LC+ SV +V F+G++
Sbjct: 60 PILRTLESCCGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFEGLE 119
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
EPDAF+CNTIM++++ +NDP+ AL FYYE+M+ K V NHYTFPLL KVC I S+ +G+
Sbjct: 120 EPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGE 179
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
K+HARI+K GFELDLFVRNSLIHMYSVCG + DAR +FE + DLVTWNSMIDGYVKN
Sbjct: 180 KIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNG 239
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
E+G ARELF+ MPERD+F+WNSMI+GYV GDM AA LF+ MPFRD+VSWNCMIDGYA+
Sbjct: 240 EIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQ 299
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
+ N+ A F+ M RNVVSWNI+LALYVR KDY ECLR+FD+M+ G+ PNEA+L+SV
Sbjct: 300 VQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMM-GETMPNEATLVSV 358
Query: 358 LTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
LTACA++G +D G+WIHSYI+ R I+PDVLLST+LLTMYAKCG MDLAR+VFD M+ ++
Sbjct: 359 LTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRS 418
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VVSWNSMIMGYGMHGQ +KALEMF++MEKRGP PNDATFICVLSAC H+GM+LEGWWYFD
Sbjct: 419 VVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFD 478
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
LM+R YKIEPKVEHYGCMVDLLGRAGLM+D EEL+ K+PME G ALWGALLSAC THSNS
Sbjct: 479 LMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNS 538
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
EL +IVA+ L+ELEPRD GPY+LLSNIYA+EGKWD+VE +R++MKE+ L K G S VH
Sbjct: 539 ELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHI 598
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
EF ++S VE HRK ++YS+L ++ QMK+
Sbjct: 599 EEFGTQSFVEKASVHRKSMMYSILSDMATQMKL 631
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/638 (62%), Positives = 481/638 (75%), Gaps = 30/638 (4%)
Query: 1 MSVRLKFTKTTEASLSLDKFIKSQKNLPKTPPKLWANEPKPKF---TDTDNQRLPIVDLS 57
M++ K+ K SLSL+KF+KS+KNL KTPPKL+ N+P P+ T +++ P +DL+
Sbjct: 1 MTINHKYYK---HSLSLNKFLKSKKNLSKTPPKLFPNDPTPQQITQTISNSSNAPTLDLN 57
Query: 58 HPILQKLE-SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
HPILQKLE SC+ +K+F+QIHTQL V GL Q FAASR +KKLC L+SVS V ++ I
Sbjct: 58 HPILQKLEQSCTNIKQFNQIHTQLTVLGLFQHPFAASRYIKKLCACLNSVSHCVSLYNHI 117
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+EPDAFMCNTIM+SF+ +NDPFGAL FYYEKM+AK+V NHYTFPL+ KVCA I SLREG
Sbjct: 118 EEPDAFMCNTIMRSFVNVNDPFGALRFYYEKMIAKWVLPNHYTFPLVAKVCADIGSLREG 177
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+KVHA +VK GFELDLFVRNS I YSVCG DAR VF++G V DLV+WNSMIDGYVKN
Sbjct: 178 QKVHALVVKFGFELDLFVRNSFIRFYSVCGRTSDARMVFDNGFVLDLVSWNSMIDGYVKN 237
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
E+G ARE+FD M ERDIFTWNSMISGYV VGDMEAA GLFD MP RDVVSWNCMIDG+A
Sbjct: 238 GELGLAREIFDEMYERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVVSWNCMIDGFA 297
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
+I +V+ A FD M +RNVVSWN++LALY+RCK Y +CLR FD M+ GD P+EASL+S
Sbjct: 298 RIKDVSMAAKFFDEMPLRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGDFVPDEASLVS 357
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VLTACA + ++D G+W+HSY++ IKPD+LLST+LLTMYAKCG MDLAR VFD M EK+
Sbjct: 358 VLTACAELKMLDQGKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLAREVFDKMPEKS 417
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VVSWNSMI+GYG+HG G+KALEMF EMEK GP PNDATF+ VLSAC+H+GMV GWWYFD
Sbjct: 418 VVSWNSMIIGYGIHGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGMVWNGWWYFD 477
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
LM R Y+I+PK EHYGC+VDLLG+AGL SE+L K E P LWG LLSAC H S
Sbjct: 478 LMHRKYRIQPKPEHYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLWGDLLSACRAHCIS 537
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE-KAVGSSLVH 595
E G+I+A+ L++L P PY+LLSN Y +EG+WD+VENLR +K K L K V +S H
Sbjct: 538 EPGEILAKQLIKLFPNHVVPYLLLSNTYVAEGRWDDVENLRMTLKNKTLNSKMVFTSRRH 597
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD 633
SML E AQ+K+ D
Sbjct: 598 ----------------------SMLSEAAAQIKLSNID 613
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/573 (60%), Positives = 441/573 (76%), Gaps = 4/573 (0%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+ LES + E +Q+ +QL+VSGLSQ A+ +KKLC+ + + FD + P
Sbjct: 10 LFAALESWKNLHELNQVLSQLIVSGLSQHPLFATSAIKKLCSHSVTFPRATFLFDHLHHP 69
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
DAF CNTI++++ D AL FYY KM+A+ V NHYTFPLL KVC I S REG K
Sbjct: 70 DAFHCNTIIRAYARKPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCTDIGSFREGLKG 129
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HARIVK GF DLF RNSLI MYSV G + +AR VF++ DLV++NSMIDGYVKN E+
Sbjct: 130 HARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNSMIDGYVKNGEI 189
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
G AR++F+ MP+RD+ +WN +I+GYV VGD++AAN LF+ +P RD VSWNCMIDG A++G
Sbjct: 190 GAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVSWNCMIDGCARVG 249
Query: 300 NVTSARNCFDRM--CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG-DAKPNEASLMS 356
NV+ A FDRM +RNVVSWN +LAL+ R K+Y ECL LF +M+ G +A PNEA+L+S
Sbjct: 250 NVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEGREAVPNEATLVS 309
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VLTACAN+G + +G W+HS+I+ IKPDVLL T LLTMYAKCG MDLA+ VFD M ++
Sbjct: 310 VLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDLAKGVFDEMPVRS 369
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VVSWNSMIMGYG+HG G+KALE+F+EMEK G PNDATFI VLSACTHAGMV+EGWWYFD
Sbjct: 370 VVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHAGMVMEGWWYFD 429
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
LMQR+YKIEPKVEHYGCMVDLL RAGL+ +SEEL+ +P++AG A+WGALLS CS H +S
Sbjct: 430 LMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLSGCSNHLDS 489
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
ELG+IVA+ +ELEP+D GPY+LLSN+YA++G+WD+VE++R ++KEK L+K SSLVH
Sbjct: 490 ELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIKEKGLQKEAASSLVHL 549
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+F S+ V+N +RK I+YSML E+G QMK+
Sbjct: 550 EDFESK-YVKNNSGYRKKIMYSMLSELGTQMKL 581
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/446 (72%), Positives = 380/446 (85%), Gaps = 2/446 (0%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M+ K V NHYTFPLL KVC I S+ +G+K+HARI+K GFELDLFVRNSLIHMYSVCG
Sbjct: 1 MVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGR 60
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
+ DAR +FE + DLVTWNSMIDGYVKN E+G ARELF+ MPERD+F+WNSMI+GYV
Sbjct: 61 IGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGN 120
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
GDM AA LF+ MPFRD+VSWNCMIDGYA++ N+ A F+ M RNVVSWNI+LALYV
Sbjct: 121 GDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYV 180
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDV 386
R KDY ECLR+FD+M+ G+ PNEA+L+SVLTACA++G +D G+WIHSYI+ R I+PDV
Sbjct: 181 RIKDYDECLRMFDKMM-GETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDV 239
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
LLST+LLTMYAKCG MDLAR+VFD M+ ++VVSWNSMIMGYGMHGQ +KALEMF++MEKR
Sbjct: 240 LLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR 299
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
GP PNDATFICVLSAC H+GM+LEGWWYFDLM+R YKIEPKVEHYGCMVDLLGRAGLM+D
Sbjct: 300 GPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKD 359
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
EEL+ K+PME G ALWGALLSAC THSNSEL +IVA+ L+ELEPRD GPY+LLSNIYA+
Sbjct: 360 LEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAA 419
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSS 592
EGKWD+VE +R++MKE+ L K G S
Sbjct: 420 EGKWDDVEIVRKMMKERGLTKTTGLS 445
>gi|255575758|ref|XP_002528778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531781|gb|EEF33600.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 518
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/503 (64%), Positives = 399/503 (79%), Gaps = 6/503 (1%)
Query: 11 TEASLSLDKFIKSQKNLPKTPPKLWANEPKP-KFTDTDNQRLPIVDLSHPILQKLE-SCS 68
+ +SL+L+KFIKSQKNL + PKL+ N+PKP + T T + ++ ++DL+H +LQKLE SC
Sbjct: 6 SRSSLALNKFIKSQKNLSEPSPKLFPNDPKPTQITPTLDPKVLVLDLNHQLLQKLELSCI 65
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC-TSLSSVSLSVLFFDGIQEPDAFMCNTI 127
+K+F+QIHTQL+V GL Q AA R +KKLC T + +S V +D I++PDAF+CNTI
Sbjct: 66 NIKQFNQIHTQLIVLGLFQHPLAAGRYIKKLCNTYFNLLSHCVYLYDYIEQPDAFICNTI 125
Query: 128 MKSFLMLN-DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC 186
++ F+ LN DPFGAL FYY+KM+AK+V N YTFPLL KVCA I SL+EG+K HA +VK
Sbjct: 126 IRCFVSLNNDPFGALRFYYDKMIAKWVLPNRYTFPLLVKVCADIGSLKEGQKAHACVVKF 185
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
GFE D +VRNSL+HMYS CG VLDAR +FE G V DLV+WNSMI GYVKN ++G ARELF
Sbjct: 186 GFEFDAYVRNSLLHMYSACGRVLDARLLFESGFVLDLVSWNSMIIGYVKNGDIGLARELF 245
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
D MPERD F+WNSMISGYV GD+EAA LFD MP RDVVSWNCMIDGYAKI NV+ AR
Sbjct: 246 DEMPERDAFSWNSMISGYVGAGDVEAAKKLFDNMPSRDVVSWNCMIDGYAKIRNVSVARW 305
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG-DAKPNEASLMSVLTACANMG 365
F++M RN+VSWNI+LALY++CK+Y ECL+LFDRMI + +PN+ASLMSVLTACAN
Sbjct: 306 LFNQMPFRNIVSWNIMLALYLKCKNYGECLKLFDRMIEERELRPNKASLMSVLTACANFR 365
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+D+G+WIHSYI+ ++ D LLST+LLTMYAKCG+MD AR++F M K+VVSWNSMIM
Sbjct: 366 RLDLGKWIHSYIKDNEVESDELLSTALLTMYAKCGMMDFARHIFTKMPHKSVVSWNSMIM 425
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY ++G EKALE F+EMEK PN ATF+ VLSAC+HA ++LEGWWYFDLMQR YKIE
Sbjct: 426 GYAINGHAEKALETFLEMEKSSMMPNAATFVSVLSACSHAELLLEGWWYFDLMQRKYKIE 485
Query: 486 PKVEHYGCMVDLLGRA-GLMRDS 507
PKVEH GCMVDLL +A ++ DS
Sbjct: 486 PKVEHCGCMVDLLRQAEAVLEDS 508
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 57/312 (18%)
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
+D+MI PN + ++ CA++G + GQ H+ + K + D + SLL MY+
Sbjct: 144 YDKMIAKWVLPNRYTFPLLVKVCADIGSLKEGQKAHACVVKFGFEFDAYVRNSLLHMYSA 203
Query: 399 CG-------------VMDL------------------ARNVFDNMTEKNVVSWNSMIMGY 427
CG V+DL AR +FD M E++ SWNSMI GY
Sbjct: 204 CGRVLDARLLFESGFVLDLVSWNSMIIGYVKNGDIGLARELFDEMPERDAFSWNSMISGY 263
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM--------Q 479
G E A ++F M P+ + ++ C++ V W F+ M
Sbjct: 264 VGAGDVEAAKKLFDNM----PSRDVVSWNCMIDGYAKIRNVSVARWLFNQMPFRNIVSWN 319
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ + K ++YG + L R ++ + + A ++L+AC+ +LG
Sbjct: 320 IMLALYLKCKNYGECLKLFDR---------MIEERELRPNKASLMSVLTACANFRRLDLG 370
Query: 540 KIVAQHLMELE-PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL----EKAVGSSLV 594
K + ++ + E D L +YA G D ++ M K + +G ++
Sbjct: 371 KWIHSYIKDNEVESDELLSTALLTMYAKCGMMDFARHIFTKMPHKSVVSWNSMIMGYAIN 430
Query: 595 HPGEFASESIVE 606
E A E+ +E
Sbjct: 431 GHAEKALETFLE 442
>gi|414884999|tpg|DAA61013.1| TPA: hypothetical protein ZEAMMB73_343744 [Zea mays]
Length = 557
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 230/407 (56%), Positives = 305/407 (74%), Gaps = 3/407 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ + G + AR++F++ P DLVT+NSM+ GY ++ ARELFD MP
Sbjct: 151 DTVTWNTLLRSFLRMGLLPAARRLFDEMPERDLVTYNSMLSGYAAEGDIANARELFDGMP 210
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ERD+ TWNSM++GY GDME+A LFD+MP RDVVSWN M+DGYA+ G++ R FD
Sbjct: 211 ERDVVTWNSMLAGYAQRGDMESAKRLFDVMPVRDVVSWNSMLDGYAQTGDIEMTRMVFDG 270
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDI 369
M R+ VSWN++LALY + KD+ ECL LFD M+ G +KPNE + +SVLTAC ++G ++
Sbjct: 271 MPRRSTVSWNVVLALYAKVKDWHECLNLFDAMMAVGGSKPNEKTFVSVLTACGHLGDLER 330
Query: 370 GQWIHSYIQKC--RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+W+H + + R+ PDVLL T+++TMYAKCGVM A+ +FD MTE++V SWNSMI+GY
Sbjct: 331 GRWVHHLVHESWERLLPDVLLLTAMMTMYAKCGVMGTAKEIFDLMTERSVASWNSMIIGY 390
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
G+HG EKALE+FMEMEK GP PN+ TFIC+LS+C H G+VLEGWW FD M R Y IEPK
Sbjct: 391 GLHGYSEKALELFMEMEKNGPQPNETTFICILSSCAHGGLVLEGWWCFDRMVRFYNIEPK 450
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
EH+GCM+DLLGRAGL+RDSE L++ L + PALWGAL+SA T +S+LG+ + L+
Sbjct: 451 AEHFGCMMDLLGRAGLLRDSENLINNLQAKVSPALWGALISASRTQDSSKLGEFIGTKLI 510
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
E++P + YVLLSNIYA+EG+WD+VE +R++MKEK +EK VG SLV
Sbjct: 511 EMKPTEFSSYVLLSNIYATEGRWDDVEKVRKVMKEKVVEKDVGMSLV 557
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 14/306 (4%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+ NS++S Y+ G +A L +P D V+WN ++ + ++G + +AR FD M
Sbjct: 120 DLRLANSLLSLYLSHGSTASARRLLADIPRPDTVTWNTLLRSFLRMGLLPAARRLFDEMP 179
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
R++V++N +L+ Y D LFD M D + S+L A G ++ +
Sbjct: 180 ERDLVTYNSMLSGYAAEGDIANARELFDGMPERDV----VTWNSMLAGYAQRGDMESAKR 235
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+ + R DV+ S+L YA+ G +++ R VFD M ++ VSWN ++ Y
Sbjct: 236 LFD-VMPVR---DVVSWNSMLDGYAQTGDIEMTRMVFDGMPRRSTVSWNVVLALYAKVKD 291
Query: 433 GEKALEMF-MEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY-KIEPKVEH 490
+ L +F M G PN+ TF+ VL+AC H G + G W L+ + ++ P V
Sbjct: 292 WHECLNLFDAMMAVGGSKPNEKTFVSVLTACGHLGDLERGRWVHHLVHESWERLLPDVLL 351
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
M+ + + G+M ++E+ L E A W +++ H SE + ME+E
Sbjct: 352 LTAMMTMYAKCGVMGTAKEIFD-LMTERSVASWNSMIIGYGLHGYSE---KALELFMEME 407
Query: 551 PRDPGP 556
P P
Sbjct: 408 KNGPQP 413
>gi|326530660|dbj|BAK01128.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 613
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/446 (53%), Positives = 317/446 (71%), Gaps = 17/446 (3%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ G + AR +F+ PV DLV++NSM+ G+ ++ AR+LFD MP
Sbjct: 166 DAVTWNTLLRACLRSGLLPSARHLFDQMPVRDLVSYNSMLSGHAAAGDMDGARQLFDGMP 225
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ERD+ +WNSM++G+ GDME A +FD MP RDVVSWN M+DGYA+ G+V +AR FD
Sbjct: 226 ERDVVSWNSMLAGHTRCGDMEEARRMFDAMPERDVVSWNSMLDGYAQAGDVLAARAVFDG 285
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDI 369
M R+ VSWN++LALY R K++ ECLRLFD M+ G A PNE + +SVLTAC ++G ++
Sbjct: 286 MPRRSTVSWNVVLALYARVKNWRECLRLFDAMMAVGAAVPNEKTFVSVLTACGSLGDLER 345
Query: 370 GQWIHSYIQKC--RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+ +H +++ + PDVLL T+LLTMYAKCGVM+ AR +FD+M E++V SWNSMI+GY
Sbjct: 346 GKRVHDLVRQRWETLVPDVLLLTALLTMYAKCGVMEAARVIFDSMGERSVPSWNSMIIGY 405
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
G+HGQ EKALE+F+EME+ GP PN+ TF+CVLS+C H G+VLEGWW FD M R+Y +EPK
Sbjct: 406 GLHGQSEKALELFLEMERTGPRPNETTFVCVLSSCAHGGLVLEGWWCFDRMVRLYGVEPK 465
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
EH+GCM+DLLGRAGL+ DS+ LV L +A PALWGA++SA + S LG+ V + L+
Sbjct: 466 AEHFGCMMDLLGRAGLLTDSDTLVQNLQEKASPALWGAMVSASRAQNGSRLGEFVGKKLI 525
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
E+ P++ GPYVLLSNIYA EG+W++VE +R +MK EK VG SLV E
Sbjct: 526 EMRPKEVGPYVLLSNIYAGEGRWNDVEKVREMMKGNGAEKDVGLSLVGSSE--------- 576
Query: 608 CPPHR----KCIVYSMLGEIGAQMKM 629
P HR +V SMLGEIGA +K+
Sbjct: 577 -PEHRIGTEDGVVLSMLGEIGAHLKL 601
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 154/337 (45%), Gaps = 45/337 (13%)
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
DL NS++ Y+ + AR LF +P D TWN+++ + G + +A LFD MP
Sbjct: 135 DLRLANSLLARYLAHGSHASARRLFADVPRPDAVTWNTLLRACLRSGLLPSARHLFDQMP 194
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
RD+VS+N M+ G+A G++ AR FD M R+VVSWN +LA + RC D E R+FD
Sbjct: 195 VRDLVSYNSMLSGHAAAGDMDGARQLFDGMPERDVVSWNSMLAGHTRCGDMEEARRMFDA 254
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M P D+ W S+L YA+ G
Sbjct: 255 M------PER----------------DVVSW-----------------NSMLDGYAQAGD 275
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLS 460
+ AR VFD M ++ VSWN ++ Y + L +F M G PN+ TF+ VL+
Sbjct: 276 VLAARAVFDGMPRRSTVSWNVVLALYARVKNWRECLRLFDAMMAVGAAVPNEKTFVSVLT 335
Query: 461 ACTHAGMVLEGWWYFDLM-QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
AC G + G DL+ QR + P V ++ + + G+M + + + +
Sbjct: 336 ACGSLGDLERGKRVHDLVRQRWETLVPDVLLLTALLTMYAKCGVMEAARVIFDSMGERSV 395
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
P+ W +++ H SE + +E+E P P
Sbjct: 396 PS-WNSMIIGYGLHGQSE---KALELFLEMERTGPRP 428
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 176/399 (44%), Gaps = 63/399 (15%)
Query: 75 QIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H + SG L D A+ +L + S S LF D + PDA NT++++ L
Sbjct: 121 SLHALAVRSGHLPADLRLANSLLARYLAHGSHASARRLFAD-VPRPDAVTWNTLLRACLR 179
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG----IRSLREGKKVHARIVKCGFE 189
A + + + V +N L G AG R L +G E
Sbjct: 180 SGLLPSARHLFDQMPVRDLVSYNSM---LSGHAAAGDMDGARQLFDGMP----------E 226
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
D+ NS++ ++ CG++ +AR++F+ P D+V+WNSM+DGY + +V AR +FD M
Sbjct: 227 RDVVSWNSMLAGHTRCGDMEEARRMFDAMPERDVVSWNSMLDGYAQAGDVLAARAVFDGM 286
Query: 250 PERDIFTWNSMISGYVDV------------------------------------GDMEAA 273
P R +WN +++ Y V GD+E
Sbjct: 287 PRRSTVSWNVVLALYARVKNWRECLRLFDAMMAVGAAVPNEKTFVSVLTACGSLGDLERG 346
Query: 274 NGLFDLMPFR------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
+ DL+ R DV+ ++ YAK G + +AR FD M R+V SWN ++ Y
Sbjct: 347 KRVHDLVRQRWETLVPDVLLLTALLTMYAKCGVMEAARVIFDSMGERSVPSWNSMIIGYG 406
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW-IHSYIQKCRIKPDV 386
+ L LF M R +PNE + + VL++CA+ G++ G W ++ ++P
Sbjct: 407 LHGQSEKALELFLEMERTGPRPNETTFVCVLSSCAHGGLVLEGWWCFDRMVRLYGVEPKA 466
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS-WNSMI 424
++ + + G++ + + N+ EK + W +M+
Sbjct: 467 EHFGCMMDLLGRAGLLTDSDTLVQNLQEKASPALWGAMV 505
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/548 (43%), Positives = 355/548 (64%), Gaps = 2/548 (0%)
Query: 49 QRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL 108
Q P + L +P+L L+ T + QIH QL+ + L D+FAASR+L + + +V+
Sbjct: 3 QSTPKLQLKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNY 62
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+ L F I +P++F+CNT++K + + P AL FY E M K + ++YT+P + K C
Sbjct: 63 AELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAE-MRRKGLLGDNYTYPFVLKACG 121
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ L EG V VK GF D+FV N LI MY CGE AR VF+ DLV+WNS
Sbjct: 122 AMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNS 181
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY-VDVGDMEAANGLFDLMPFRDVVS 287
M+ GYV E+ A+ +FD MPERD+ +W+ MI GY +G++ A FD MP RD+VS
Sbjct: 182 MLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVS 241
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
WN MIDGYAK+G + AR FD+M +NV+SW+I++ Y + +D E L LF +M+
Sbjct: 242 WNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGI 301
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP+ S++ ++AC+ +G +D G+WIH Y+++ R+ D+++ T+L+ MY KCG D AR
Sbjct: 302 KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARR 361
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F++M E+NVVSWN MI+G GM+G G++ALE F +ME +D F+ VL AC+HA +
Sbjct: 362 IFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANL 421
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG F+ M+ +Y++EPK+EHYGC+VDLLGRAG + + ++ +PM+ ALWG+LL
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H N L +IV + L EL+ D G YVL+SNIYA G W+ + +R++MKE++++K
Sbjct: 482 LACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKK 541
Query: 588 AVGSSLVH 595
+G S++
Sbjct: 542 DIGRSVIE 549
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/548 (43%), Positives = 354/548 (64%), Gaps = 2/548 (0%)
Query: 49 QRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL 108
Q P + L +P+L L+ T + QIH QL+ + L D+FAASR+L + + +V+
Sbjct: 3 QSTPKLQLKNPLLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNY 62
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+ L F I +P++F+CNT++K + + P AL FY E M K + ++YT+P + K C
Sbjct: 63 AELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAE-MRKKGLLGDNYTYPFVLKACG 121
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ L EG V VK GF D+FV N LI MY CGE AR VF+ DLV+WNS
Sbjct: 122 AMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNS 181
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY-VDVGDMEAANGLFDLMPFRDVVS 287
M+ GYV E+ A+ +FD MPERD+ +W+ MI GY +G++ A FD MP RD+VS
Sbjct: 182 MLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVS 241
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
WN MIDGYAK+G + AR FB+M +NV+SW+I++ Y +D E L LF +M+
Sbjct: 242 WNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGI 301
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP+ S++ ++AC+ +G +D G+WIH Y+++ R+ D+++ T+L+ MY KCG D AR
Sbjct: 302 KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARX 361
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F++M E+NVVSWN MI+G GM+G G++ALE F +ME +D F+ VL AC+HA +
Sbjct: 362 IFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANL 421
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG F+ M+ +Y++EPK+EHYGC+VDLLGRAG + + ++ +PM+ ALWG+LL
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H N L +IV + L EL+ D G YVL+SNIYA G W+ + +R++MKE++++K
Sbjct: 482 LACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKK 541
Query: 588 AVGSSLVH 595
+G S++
Sbjct: 542 DIGRSVIE 549
>gi|357118977|ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 604
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/448 (52%), Positives = 314/448 (70%), Gaps = 7/448 (1%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ G + AR++F+ P DLV++NSM+ Y ++ A LFD MP
Sbjct: 153 DTVTWNTLLRACLRSGLLPSARRLFDQMPHRDLVSYNSMLSSYAAVGDMAGAGRLFDEMP 212
Query: 251 ERDIFTWNSMISGYVDVG-DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
ERD+ TWN+M++GY G DM +A +FD MP RDVVSWN M+DGYA+ G+V A FD
Sbjct: 213 ERDVVTWNTMLAGYARGGADMASARAVFDAMPERDVVSWNSMLDGYAQAGDVVMAWAMFD 272
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVID 368
M R+ SWN++LALY R KD+ ECLRLFD M+ G + PNE + +SVLTAC ++G ++
Sbjct: 273 GMPRRSAASWNVVLALYARRKDWRECLRLFDAMMAVGVSVPNEKTFVSVLTACGSLGDLE 332
Query: 369 IGQWIHSYIQKC--RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
G+W+H +++ R+ PDVLL T+LLTMYAKCG M+ AR +FD+M+E++V SWNSMI+G
Sbjct: 333 RGKWVHGLVRERWDRLVPDVLLLTALLTMYAKCGAMETAREIFDSMSERSVPSWNSMIIG 392
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
YG+HGQ EKALE+F+EMEK GP PN+ TFICVLS+C H G+VLEGWW FD M R Y EP
Sbjct: 393 YGLHGQSEKALELFLEMEKSGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYGFEP 452
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
K EH+GCM+DLLGRAGL++DSE L+ L +A PALWG ++SA T +N +LG+ V + L
Sbjct: 453 KAEHFGCMMDLLGRAGLLKDSENLIQNLQGKASPALWGIMMSASQTQNNYKLGEFVGKKL 512
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
+E++P + GPY+LLSNIYASEG+W +VE +R +MKE EK VG SL+ E E
Sbjct: 513 IEMKPAEFGPYLLLSNIYASEGRWGDVEKVREVMKENGAEKYVGLSLIGSSESEPRPATE 572
Query: 607 N-CPPHRKCIVYSMLGEIGAQMKM--CR 631
+ R ++ SMLGE+ MK+ CR
Sbjct: 573 DGITVPRDDVMLSMLGEMSVHMKLPKCR 600
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V ++ FDG+ A N ++ + D L + M N TF +
Sbjct: 264 VVMAWAMFDGMPRRSAASWNVVLALYARRKDWRECLRLFDAMMAVGVSVPNEKTFVSVLT 323
Query: 166 VCAGIRSLREGKKVHARIVKCGFEL--DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
C + L GK VH + + L D+ + +L+ MY+ CG + AR++F+ +
Sbjct: 324 ACGSLGDLERGKWVHGLVRERWDRLVPDVLLLTALLTMYAKCGAMETAREIFDSMSERSV 383
Query: 224 VTWNSMIDGYVKNREVGFARELF 246
+WNSMI GY + + A ELF
Sbjct: 384 PSWNSMIIGYGLHGQSEKALELF 406
>gi|115479089|ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51091564|dbj|BAD36301.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631371|dbj|BAF25052.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|215740507|dbj|BAG97163.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 612
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/444 (54%), Positives = 316/444 (71%), Gaps = 9/444 (2%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ G + AR++F++ P D+V++NSM+ GYV ++ AR LFD M
Sbjct: 156 DAVTWNTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMA 215
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
RD+ TWNSMISGY GDME A +FD MP RDVVSWN M+DGYA+ G+V AR FD
Sbjct: 216 RRDVVTWNSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDG 275
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDI 369
M R++VSWN++LALY + +D+ ECL LFD MI G+ PNE + +SVLTACAN+G ++
Sbjct: 276 MPKRSIVSWNVILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEK 335
Query: 370 GQWIHSYIQKC--RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+W+H +Q+ R+ PDVLL T+LLTMYAKCGVM+ AR +F++M EK+V SWNSMI+GY
Sbjct: 336 GRWVHDLVQERWDRLVPDVLLLTTLLTMYAKCGVMETAREIFNSMGEKSVPSWNSMIIGY 395
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
G+HGQ EKALE+F+EME+ GP PN+ TFICVLS+C H G+VLEGWW FD M R Y IEPK
Sbjct: 396 GLHGQSEKALELFLEMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPK 455
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
EH+GCM+DLLGRAGL+ SE L+ L + ALWG L+SA T +N +LG+ V + L+
Sbjct: 456 SEHFGCMMDLLGRAGLLEQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLI 515
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV---HPGEFASESI 604
E+ P + GPY+LLSNIYA+EG+WD+VE +R++M+EK +EK G SLV G F +ES
Sbjct: 516 EMRPTEVGPYILLSNIYAAEGRWDDVEKVRKVMEEKGVEKDAGLSLVGSREGGHFINES- 574
Query: 605 VENCPPHRKCIVYSMLGEIGAQMK 628
R ++ MLGE+ MK
Sbjct: 575 --GASAPRNDVMLCMLGEMSVHMK 596
>gi|125605648|gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japonica Group]
Length = 612
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/444 (53%), Positives = 316/444 (71%), Gaps = 9/444 (2%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ G + AR++F++ P D+V++NSM+ GYV ++ AR LFD M
Sbjct: 156 DAVTWNTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMA 215
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
RD+ TWNSMISGY GDME A +FD MP RDVVSWN M+DGYA+ G+V AR FD
Sbjct: 216 RRDVVTWNSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDG 275
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDI 369
M R++VSWN++LALY + +D+ ECL LFD MI G+ PNE + +SVLTACAN+G ++
Sbjct: 276 MPKRSIVSWNVILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEK 335
Query: 370 GQWIHSYIQKC--RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+W+H +Q+ R+ PDVLL T+LLTMYAKCGVM+ AR +F++M EK+V SWNSMI+GY
Sbjct: 336 GRWVHDLVQERWDRLVPDVLLLTTLLTMYAKCGVMETAREIFNSMGEKSVPSWNSMIIGY 395
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
G+HGQ EKALE+F+EME+ GP PN+ TFICVLS+C H G+VLEGWW FD M R Y IEPK
Sbjct: 396 GLHGQSEKALELFLEMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPK 455
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
EH+GCM+DLLGRAGL+ SE L+ L + ALWG L+SA T +N +LG+ V + L+
Sbjct: 456 SEHFGCMMDLLGRAGLLEQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLI 515
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV---HPGEFASESI 604
E+ P + GPY+LLSNIYA+EG+WD+VE +R++M+EK +EK G SLV G F +ES
Sbjct: 516 EMRPTEVGPYILLSNIYAAEGRWDDVEKVRKVMEEKGVEKDAGLSLVGSREGGHFINES- 574
Query: 605 VENCPPHRKCIVYSMLGEIGAQMK 628
R ++ M+GE+ MK
Sbjct: 575 --GASAPRNDVMLCMVGEMSVHMK 596
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/638 (37%), Positives = 362/638 (56%), Gaps = 43/638 (6%)
Query: 27 LPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLS 86
L P L P F T + ++ +HP L L +C + + QIH+Q++ +GL
Sbjct: 3 LASFSPSLVMPPPTLHFQPTSDPPYKLLQ-NHPSLTLLSTCKSFQNLKQIHSQIIKTGLH 61
Query: 87 QDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
FA S++++ S ++S ++L F+ I++P+ F+ NT+++ + + P GA+ FY
Sbjct: 62 NTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYV 121
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+M+ VE N YTFP L K CA + + +EGK++H ++K G E D FV SLI+MY+
Sbjct: 122 -RMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQN 180
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
GE+ A VF + D V++ ++I GY + AR LF+ +P RD +WN+MI+GY
Sbjct: 181 GELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYA 240
Query: 266 DVGDMEAANGLFDLMPFRDVV--------------------------SW----------- 288
G E A F M +V SW
Sbjct: 241 QSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLR 300
Query: 289 --NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N +ID Y+K G++ AR+ F+ +C ++++SWN+++ Y Y E L LF +M + +
Sbjct: 301 LVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSN 360
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLA 405
+PN+ + +S+L ACA +G +D+G+WIH+YI K + + L TSL+ MYAKCG ++ A
Sbjct: 361 VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAA 420
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+ VF M K++ SWN+MI G MHG ALE+F +M G P+D TF+ VLSAC+HA
Sbjct: 421 KQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHA 480
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V G F M Y I PK++HYGCM+DLLGRAGL ++E L+ + M+ A+WG+
Sbjct: 481 GLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGS 540
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL AC H N ELG+ A+HL ELEP +PG YVLLSNIYA+ G+WD+V +R + +K +
Sbjct: 541 LLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGM 600
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
+K G S + E +V + + +Y ML EI
Sbjct: 601 KKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEI 638
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/612 (39%), Positives = 359/612 (58%), Gaps = 41/612 (6%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGI 116
HP L+ L C +++ F QIH ++ +GL FA S++++ S S +S ++ F+ I
Sbjct: 30 HPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI 89
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+EP+ F+ N++++ M P AL F+ +M+ VE N YTFP L K CA + S EG
Sbjct: 90 EEPNLFIWNSMIRGLSMSLSPALALVFFV-RMIYSGVEPNSYTFPFLLKSCAKLASAHEG 148
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
K++HA ++K GF D+F+ SLI+MY+ GE+ +A+ VF+ D +++ ++I GY
Sbjct: 149 KQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALW 208
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV----------- 285
+ AR+LFD MP +D+ +WN+MI+GY +G + A LF+ M +V
Sbjct: 209 GYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVL 268
Query: 286 ---------------VSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
SW N +ID Y+K G++ +AR FD M R+V+
Sbjct: 269 SACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVI 328
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SWN+++ Y Y E L LF M+ +P E + +S+L +CA++G ID+G+WIH+YI
Sbjct: 329 SWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYI 388
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K LSTSL+ +YAKCG + AR VFD M K++ SWN+MI G MHGQ +KA
Sbjct: 389 NKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAF 448
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
E+F +M G PN+ TF+ +LSAC HAG+V G +F M + YKI PK +HYGCM+DL
Sbjct: 449 ELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDL 508
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAGL ++E L+ + ++ A+WG+LL AC H ELG++VA+ L ELEP +PG Y
Sbjct: 509 LGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAY 568
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVY 617
VLLSNIYA GKWD+V +R + ++ ++K G + + E +V + + +Y
Sbjct: 569 VLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIY 628
Query: 618 SMLGEIGAQMKM 629
ML E+ Q+K+
Sbjct: 629 RMLEEVDEQLKV 640
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 337/552 (61%), Gaps = 7/552 (1%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L + L+SC T K+ HQI Q++ +G + + + L +C +L ++ + FD
Sbjct: 37 LEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPK-LVTICATLKRMTYARQLFDQ 95
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I +P+ + N++ + + ++ + + F + +M + N +TFP++ K C I +L E
Sbjct: 96 IPDPNIALWNSMFRGYAQ-SESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIE 154
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G++VH ++KCGF + FV +LI MYS G V DA K+F + ++V W SMI+GY+
Sbjct: 155 GEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 214
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
+ ++ AR LFD PERD+ WN M+SGY++ GDM A LF MP RDV+ WN ++ GY
Sbjct: 215 SADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGY 274
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASL 354
A GNV + F+ M RN+ SWN L+ Y + E L F RM+ D PN+A+L
Sbjct: 275 ATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATL 334
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
++VL+ACA +G +D+G+W+H Y + +K +V + +L+ MYAKCG+++ A +VF M
Sbjct: 335 VTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDT 394
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
K+++SWN++I G MH +G AL +F +M+ G P+ TFI +L ACTH G+V +G+ Y
Sbjct: 395 KDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAY 454
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M Y I P++EHYGCMVD+L RAG + + V K+P+EA +W LL AC +
Sbjct: 455 FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYK 514
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N EL ++ Q L+ELEP++P YV+LSNIY G+W++V L+ M++ +K G SL+
Sbjct: 515 NVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLI 574
Query: 595 HPGEFASESIVE 606
++++VE
Sbjct: 575 E----VNDAVVE 582
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/629 (36%), Positives = 365/629 (58%), Gaps = 34/629 (5%)
Query: 4 RLKFTKTTEASLSLDKFIKSQKNLPKTPPKLW----ANEPKPKFTDTDNQRLPIVDLSHP 59
++K+ +T+ S ++ F S +L + PK+W + +PK + + P+ SH
Sbjct: 25 QIKWKETSNYSQTIPVF--SLFHLSNSFPKIWFFSLSGQPKLQPIYIGLESHPLKQSSHG 82
Query: 60 I---------------------LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
+ + + SC T K+ HQI Q++ +G + + + L
Sbjct: 83 LNPCGRSPTGGGHLRLTALRCLRENMRSCKTSKQVHQIQAQIIANGFQYNEYITPK-LVT 141
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
+C +L ++ + FD I +P+ + N++ + + ++ + + F + +M + N +
Sbjct: 142 ICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQ-SESYREVVFLFFQMKGMDIRPNCF 200
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TFP++ K C I +L EG++VH ++KCGF + FV +LI MYS G V DA K+F +
Sbjct: 201 TFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM 260
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
++V W SMI+GY+ + ++ AR LFD PERD+ WN M+SGY++ GDM A LF
Sbjct: 261 FERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFX 320
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
MP RDV+ WN ++ GYA GNV + F+ M RN+ SWN L+ Y + E L
Sbjct: 321 EMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGS 380
Query: 339 FDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
F RM+ D PN+A+L++VL+ACA +G +D+G+W+H Y + +K +V + +L+ MYA
Sbjct: 381 FKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYA 440
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG+++ A +VF M K+++SWN++I G MH +G AL +F +M+ G P+ TFI
Sbjct: 441 KCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIG 500
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+L ACTH G+V +G+ YF M Y I P++EHYGCMVD+L RAG + + V K+P+E
Sbjct: 501 ILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVE 560
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A +W LL AC + N EL ++ Q L+ELEP++P YV+LSNIY G+W++V L+
Sbjct: 561 ADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLK 620
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVE 606
M++ +K G SL+ ++++VE
Sbjct: 621 VAMRDTGFKKLPGCSLIE----VNDAVVE 645
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/602 (38%), Positives = 348/602 (57%), Gaps = 43/602 (7%)
Query: 27 LPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLS 86
L P L P F T + ++ +HP L L +C + + QIH+Q++ +GL
Sbjct: 3 LASFSPSLVMPPPTLHFQPTSDPPYKLLQ-NHPSLTLLSTCKSFQNLKQIHSQIIKTGLH 61
Query: 87 QDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
FA S++++ S ++S ++L F+ I++P+ F+ NT+++ + + P GA+ FY
Sbjct: 62 NTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYV 121
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+M+ VE N YTFP L K CA + + +EGK++H ++K G E D FV SLI+MY+
Sbjct: 122 -RMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQN 180
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
GE+ A VF + D V++ ++I GY + AR LF+ +P RD +WN+MI+GY
Sbjct: 181 GELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYA 240
Query: 266 DVGDMEAANGLFDLMPFRDVV--------------------------SW----------- 288
G E A F M +V SW
Sbjct: 241 QSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLR 300
Query: 289 --NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N +ID Y+K G++ AR+ F+ +C ++++SWN+++ Y Y E L LF +M + +
Sbjct: 301 LVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSN 360
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLA 405
+PN+ + +S+L ACA +G +D+G+WIH+YI K + + L TSL+ MYAKCG ++ A
Sbjct: 361 VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAA 420
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+ VF M K++ SWN+MI G MHG ALE+F +M G P+D TF+ VLSAC+HA
Sbjct: 421 KQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHA 480
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V G F M Y I PK++HYGCM+DLLGRAGL ++E L+ + M+ A+WG+
Sbjct: 481 GLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGS 540
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL AC H N ELG+ A+HL ELEP +PG YVLLSNIYA+ G+WD+V +R + +K +
Sbjct: 541 LLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGM 600
Query: 586 EK 587
+K
Sbjct: 601 KK 602
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/582 (39%), Positives = 337/582 (57%), Gaps = 12/582 (2%)
Query: 31 PPKL-----WANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
PP L WA DT Q+ P L + L SC TV ++ Q++ G
Sbjct: 36 PPTLTFYSEWARNNTFFIDDTLTQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGF 95
Query: 86 SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
+ + A V+ L ++ + FD +P + N I + + N + + F +
Sbjct: 96 QYNGYVAPNVVTSW-VGLKQMAHARHLFDHFPDPKVELWNAISRGYFH-NAFYREVVFLF 153
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
KM + V N +TFPL+ K CA I + EG+++H ++K G E + FV +LI +YS
Sbjct: 154 GKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGG 213
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
+ A K+F ++V W SMI GY+ V AR LFD PERD+ WN M+SGY+
Sbjct: 214 RAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYI 273
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
++GDM+AA LFD MP+RD +SWN M++GYA G+V + F+ M RNV SWN L+
Sbjct: 274 EIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGG 333
Query: 326 YVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y + E LR F RM I G PN+A+L++VL+ACA +G +D+G+W+H Y K
Sbjct: 334 YAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKG 393
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
+ + +L+ MY+KCG+++ A VF++M K++++WNSMI G HG G AL +F +M+
Sbjct: 394 SIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMK 453
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
G P+ TFI VL +CTH G+V EG YF+ M Y I P++EHYGCMVDL GRAGL+
Sbjct: 454 INGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLL 513
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
+ E V ++PMEA +W ALL AC + N +L ++ Q L+ LEP++P YVLLSNIY
Sbjct: 514 DRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIY 573
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
G+W +V L+ +M++ +K G SL+ ++S+VE
Sbjct: 574 GDLGRWKDVARLKILMRDTGSKKLPGCSLIE----VNDSVVE 611
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/614 (37%), Positives = 349/614 (56%), Gaps = 44/614 (7%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGI 116
HP L L +C T++ QIH+Q++ +GL FA S++++ S +S ++ F I
Sbjct: 29 HPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+ P+ + N +++ PF AL YY M++ E N YTFP + K C IR EG
Sbjct: 89 RNPNHVIWNHMIRGLSSSESPFLALE-YYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEG 147
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
K+VHA ++K G E + FV SLI+MY+ GE+++AR VF+ + D V++ ++I GY
Sbjct: 148 KQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASK 207
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV---------- 286
+ ARELFD +P RD+ +WN+MISGY G +E A F+ M V
Sbjct: 208 GFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVL 267
Query: 287 -----------------SW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNV 316
SW N +ID Y K G++ A N F+++ +NV
Sbjct: 268 SACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNV 327
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSWN+++ Y Y E L LF RM++ + PN+ + +S+L ACAN+G +D+G+W+H+Y
Sbjct: 328 VSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY 387
Query: 377 IQKC--RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
+ K +K V L TSL+ MYAKCG + +A+ +FD M K++ +WN+MI G+ MHG +
Sbjct: 388 VDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTD 447
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
AL +F M G P+D TF+ VL+AC HAG++ G YF M + YK+ PK+ HYGCM
Sbjct: 448 TALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCM 507
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
+DL GRAGL ++E LV + M+ A+W +LL AC H EL + VA+HL ELEP +P
Sbjct: 508 IDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENP 567
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
YVLLSNIYA G+W++V +R + + ++K G S + E +V + +
Sbjct: 568 SAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSN 627
Query: 615 IVYSMLGEIGAQMK 628
+Y ML EI +++
Sbjct: 628 EIYKMLDEIDMRLE 641
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/571 (40%), Positives = 349/571 (61%), Gaps = 8/571 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQE 118
+ L CS++ + QIH Q+L + L ++SF +++ LC ++ L+V F+ IQ+
Sbjct: 21 ISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMT---LAVNVFNQIQD 77
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
PD + NT++++ + ++P A S ++E M V +++T+P L K C+G +R +
Sbjct: 78 PDVLLYNTLIRAHVRNSEPLLAFSVFFE-MQDSGVCADNFTYPFLLKACSGKVWVRVVEM 136
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCG--EVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+HA++ K GF LD+FV NSLI Y CG V ARKVFE D V+WNSMI G VK
Sbjct: 137 IHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKV 196
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
E+G AR LFD MPERD +WN+++ GYV G+M AA LF+ MP R+VVSW+ M+ GY+
Sbjct: 197 GELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYS 256
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G++ AR FD+M ++N+V W I+++ Y + + L+++M K ++ +++S
Sbjct: 257 KAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVIS 316
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L+ACA G++ +G+ +H+ I++ R K +S +L+ MYAKCG ++ A ++F M K+
Sbjct: 317 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKD 376
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VVSWN++I G MHG GEKAL++F M+ G P+ TF+ VL ACTHAG V EG YF
Sbjct: 377 VVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFH 436
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+R Y + P+VEHYGCMVDLLGR G ++++ LV +P+E +WG LL AC HS +
Sbjct: 437 AMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSAT 496
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
L + V L++ E D G +LSNIYA+ G WD N+R MK ++K G S +
Sbjct: 497 GLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEV 556
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
+ E V + + +Y + +G +
Sbjct: 557 DDEVHEFTVFDRSHPKSDRIYKTIDGLGQHI 587
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 340/569 (59%), Gaps = 1/569 (0%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL C T++ Q+H Q++ S +A L L + ++ + F +Q P
Sbjct: 99 ILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNP 158
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N+++++ P AL Y+ M+ ++ +H T+P + K C G V
Sbjct: 159 PPSLYNSLIRALSSSKTPLEALPLYH-TMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 217
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +VK GFE D ++ +SLIH+Y+ ++ A+++F D+V+WN+MIDGYVK+ E+
Sbjct: 218 HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 277
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
G AR +FD M RD+ +WN+MI+GY VG ++ A LFD MP R++VSWN M+ G+ K G
Sbjct: 278 GHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCG 337
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
NV A F M R+VVSWN +LA Y +C E L LFD+M KP EA+++S+L+
Sbjct: 338 NVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLS 397
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA++G +D G +H+YI RI+ + ++ T+L+ MYAKCG + LA VF+ M K+V++
Sbjct: 398 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLA 457
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN++I G +HG ++A ++F EM++ G PND TF+ +LSAC+HAGMV EG D M
Sbjct: 458 WNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMS 517
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y IEPKVEHYGC++DLL RAG + ++ EL+ +PME P+ GALL C H N ELG
Sbjct: 518 SSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELG 577
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
++V + L+ L+P G Y+LLSNIYA+ KWD+ +R +MK + K G S++
Sbjct: 578 EMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGM 637
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ + +Y L EI ++K
Sbjct: 638 VHRFVAGDWSHPESNKIYEKLNEIHTRLK 666
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 349/594 (58%), Gaps = 48/594 (8%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFD 114
+HP L L +C T++ IH +++ +GL ++A S++++ L ++ ++ FD
Sbjct: 2 NHPSLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFD 61
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
IQEP+ + NT+ + + +DP AL + Y M++ + N YTFP L K CA ++ R
Sbjct: 62 SIQEPNLLIWNTMFRGHALSSDPVSAL-YLYVCMISLGLVPNSYTFPFLLKACAKSKAFR 120
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG+++H ++K G +LDL+V SLI MY G DARKVF+ D+V++ ++I GY
Sbjct: 121 EGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYA 180
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------------- 281
N + A+++FD +P +D+ +WN++ISGY + G+ + A LF M
Sbjct: 181 SNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVT 240
Query: 282 -------------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
R V SW N +ID Y K G V +A F+ + ++
Sbjct: 241 VLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKD 300
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V+SWN L+ Y Y E L LF M+R PNE +++S+L ACA++G IDIG+WIH
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHV 360
Query: 376 YIQKCRIK----PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
YI K R+K P L TSL+ MYAKCG ++ A+ VFD+M +++ SWN+MI G+ MHG
Sbjct: 361 YIDK-RLKGVSNPSSL-RTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG 418
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ A ++F M K G P+D TF+ +LSAC+H+GM+ G F M YKI PK+EHY
Sbjct: 419 RANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHY 478
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCM+DLLG +GL +++EE+++ + M+ +W +LL AC H N ELG+ AQ+L+++EP
Sbjct: 479 GCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEP 538
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
++ G YVLLSNIYA+ G+W+EV R ++ +K ++K G S + E I+
Sbjct: 539 KNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/612 (37%), Positives = 359/612 (58%), Gaps = 48/612 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT---SLSSVSLSVLFF 113
+HP L L +C T++ IH Q++ +GL ++A S++L+ LC + ++ F
Sbjct: 33 NHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLE-LCVISPHFDGLPYAISVF 91
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+ IQEP+ + NT+ + + +DP AL Y M++ + N YTFP L K CA ++
Sbjct: 92 ETIQEPNLLIWNTMFRGHALSSDPVSALKLYV-CMISLGLLPNSYTFPFLLKSCAKSKAF 150
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
+EG+++H ++K G++LDLFV SLI +Y G + DARKVF+ P D+V++ ++I GY
Sbjct: 151 KEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGY 210
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------------ 281
+ A++LFD +P +D+ +WN+MISGY + G+ + A LF M
Sbjct: 211 ASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMV 270
Query: 282 --------------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMR 314
R V SW N ++D Y+K G + +A F+ + +
Sbjct: 271 TVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK 330
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+V+SWN L+ Y Y E L LF M+R +PN+ +++S+L ACA++G IDIG+WIH
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 375 SYIQKCRIKPDV---LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
YI K R+K L TSL+ MYAKCG ++ A VF+++ K++ SWN+MI G+ MHG
Sbjct: 391 VYIDK-RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ + A ++F M K G P+D TF+ +LSAC+ +GM+ G F M + YKI PK+EHY
Sbjct: 450 RADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHY 509
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCM+DLLG +GL +++EE+++ + ME +W +LL AC N ELG+ AQ+L+++EP
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEP 569
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH 611
+PG YVLLSNIYA+ G+W+EV +R ++ +K ++K G S + E I+ +
Sbjct: 570 ENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629
Query: 612 RKCIVYSMLGEI 623
R +Y ML E+
Sbjct: 630 RNREIYGMLEEM 641
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 330/559 (59%), Gaps = 7/559 (1%)
Query: 49 QRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL 108
Q+ P L + L SC TV ++ Q++ G + + A V+ L ++
Sbjct: 17 QKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSW-VGLKQMAH 75
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+ FD +P + N I + + N + + F + KM + V N +TFPL+ K CA
Sbjct: 76 ARHLFDHFPDPKVELWNAISRGYFH-NAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCA 134
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
I + EG+++H ++K G E + FV +LI +YS + A K+F ++V W S
Sbjct: 135 KIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTS 194
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
MI GY+ V AR LFD PERD+ WN M+SGY+++GDM+AA LFD MP+RD +SW
Sbjct: 195 MISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSW 254
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDA 347
N M++GYA G+V + F+ M RNV SWN L+ Y + E LR F RM I G
Sbjct: 255 NTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLV 314
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
PN+A+L++VL+ACA +G +D+G+W+H Y K + + +L+ MY+KCG+++ A
Sbjct: 315 VPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAME 374
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF++M K++++WNSMI G HG G AL +F +M+ G P+ TFI VL +CTH G+
Sbjct: 375 VFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGL 434
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG YF+ M Y I P++EHYGCMVDL GRAGL+ + E V ++PMEA +W ALL
Sbjct: 435 VEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 494
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC + N +L ++ Q L+ LEP++P YVLLSNIY G+W +V L+ +M++ +K
Sbjct: 495 GACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKK 554
Query: 588 AVGSSLVHPGEFASESIVE 606
G SL+ ++S+VE
Sbjct: 555 LPGCSLIE----VNDSVVE 569
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 351/593 (59%), Gaps = 46/593 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFD 114
+HP L L +C T++ IH Q++ +GL ++A S++++ L + ++ F+
Sbjct: 2 NHPSLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFE 61
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
IQEP+ + NT+ + + +DP AL + Y M++ + N YTFP L K CA ++ R
Sbjct: 62 TIQEPNLLIWNTMFRGHALSSDPVSAL-YLYVCMISLGLLPNCYTFPFLLKSCAKSKAFR 120
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG+++H ++K G++LDL+V SLI MY G + DARKVF+ D+V++ ++I GY
Sbjct: 121 EGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYA 180
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------------- 281
+ A+++FD +P +D+ +WN+MISGY + G+ + A LF M
Sbjct: 181 SKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVS 240
Query: 282 -------------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
R V SW N +ID Y K G V +A F+ + ++
Sbjct: 241 VVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKD 300
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V+SWN L+ Y Y E L LF M+R PN+ +++S+L ACA++G I+IG+WIH
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHV 360
Query: 376 YIQKCRIKPDVLLS---TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
YI K R+K S TSL+ MYAKCG ++ A+ VFD++ +++ SWN+MI G+ MHG+
Sbjct: 361 YINK-RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGR 419
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
A ++F M K P+D TF+ +LSAC+H+GM+ G F M+ YKI PK+EHYG
Sbjct: 420 ANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYG 479
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DLLG +GL +++EE+++ + ME +W +LL AC ++N ELG+ AQ+L+++EP+
Sbjct: 480 CMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPK 539
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
+PG YVLLSNIYA+ G+W+EV +R ++ +K ++K G S + E I+
Sbjct: 540 NPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 342/593 (57%), Gaps = 46/593 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFD 114
+HP L L +C T++ IH Q++ +GL ++A SR+L+ L + + ++ F+
Sbjct: 2 NHPSLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFE 61
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
IQEP+ + NT+ + + +DP A+ Y M++ + N YTFP L K CA ++ +
Sbjct: 62 TIQEPNLLIWNTMFRGHALSSDPVSAIKLYV-CMISLGLLPNSYTFPFLLKSCAKLKVSK 120
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG+++H ++K G+ELDL+V SLI MY G DA KVF+ D+V++ ++I GY
Sbjct: 121 EGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYA 180
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------------- 281
+ A+++FD +P +D+ +WN++ISGY D G+ + A LF M
Sbjct: 181 SRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVT 240
Query: 282 -------------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
R V SW N +ID Y+K G V +A F + ++
Sbjct: 241 VVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKD 300
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V+SWN ++ Y Y E L LF M+R PN+ +++S+L ACA +G ID G+WIH
Sbjct: 301 VISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHV 360
Query: 376 YIQKCRIKPDV---LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
YI K RIK L TSL+ MYAKCG ++ A VF++M + + + N+MI G+ MHG+
Sbjct: 361 YIDK-RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGR 419
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
A ++F M K G P+D TF+ +LSAC+H+GM+ G F M + YKI PK+EHYG
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYG 479
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DLLG GL +++EE+++ + ME +W +LL AC H N ELG+ AQ L+++EP
Sbjct: 480 CMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPE 539
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
+PG YVLLSNIYA+ G+W+EV N+R ++ +K ++K G S + E I+
Sbjct: 540 NPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 344/572 (60%), Gaps = 8/572 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQE 118
LQ L C+ ++H Q++ L D + A +++ LC ++ L+V F+ IQ+
Sbjct: 27 LQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMN---LAVNVFNQIQD 83
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P+ + NT++++ + + A + +++ M + +++T+P L K C G L +
Sbjct: 84 PNVHLYNTLIRAHVQNSQSLKAFATFFD-MQKNGLFADNFTYPFLLKACNGKGWLPTVQM 142
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCG--EVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+H + K GF DLFV NSLI YS CG V A K+F + DLV+WNSMI G VK
Sbjct: 143 IHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKA 202
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
++G AR+LFD M ERD +WN+++ GYV G+M A LF+ MP R+VVSW+ M+ GY
Sbjct: 203 GDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYC 262
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G++ AR FD+M +N+V+W I+++ + E L+++M KP++ +L+S
Sbjct: 263 KTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLIS 322
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L ACA G++ +G+ +H+ I+K RIK V +S +L+ MYAKCG +D A ++F+ M+ ++
Sbjct: 323 ILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRD 382
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+VSWN M+ G MHG GEKA+++F +M++ G P+ T I +L ACTHAG V +G YF+
Sbjct: 383 LVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFN 442
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+R + I P +EHYGCM+DLLGR G + ++ LV +PME +WG LL AC H+
Sbjct: 443 SMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAV 502
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
L + V L+ LE DPG Y +LSNI+A+ G W+ V N+R MK ++K G+S +
Sbjct: 503 PLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIEL 562
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ E V + +Y +L ++G +K
Sbjct: 563 DDEVHEFTVFDKSHPETDKIYQILVKLGQDLK 594
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 336/543 (61%), Gaps = 7/543 (1%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
D + I L++C+T Q+H +++ GL QD F S+ L LC SLS+ S + F+
Sbjct: 23 DTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLT-LCNSLSNFSYTTSVFN 81
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
G+ P + NT +K + +S + + V + +T+P L K C+ + ++
Sbjct: 82 GVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVP-DKFTYPSLIKACSKVCGVK 140
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG H V+CG D+FV SLI +Y CGE+L ARKVF++ ++V+W +MI GY
Sbjct: 141 EGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYA 200
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
++ AR+LFD MPE++ +WN++ISGYV GD+ +A +FD MP R+VVS+ MIDG
Sbjct: 201 SFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDG 260
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK G++ SAR F+ R+VV+W+ L++ YV+ E +++F M + KP+E +
Sbjct: 261 YAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIM 320
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRI---KPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+S+++AC+ MG +++ +W+ Y++K I + V+ +L+ M AKCG MD A +F+
Sbjct: 321 VSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVI--AALIDMNAKCGSMDRATKLFEE 378
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M +++++S+ SM+ G +HG G +A+ +F M G TP+D F +L+AC+ AG+V EG
Sbjct: 379 MPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEG 438
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+YF+ M+ Y I P +HY CMVDLLGRAG ++++ EL+ +P+E WGALL AC
Sbjct: 439 CYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACK 498
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H + ELG++VA L ELEP++ G YVLLSNIYA+ +W +V LR M+E+ + K G
Sbjct: 499 LHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGC 558
Query: 592 SLV 594
S +
Sbjct: 559 SWI 561
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/593 (37%), Positives = 343/593 (57%), Gaps = 46/593 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK--LCTSLSSVSLSVLFFD 114
+HP L L C T++ IH Q++ +GL ++A S++L+ L + ++ FD
Sbjct: 2 NHPSLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFD 61
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
IQEP + NT+ + + +DP AL Y M++ + N YTFP L K CA + +
Sbjct: 62 TIQEPXLLIWNTMFRGHALSSDPVSALKLYV-CMVSLGLLPNSYTFPFLLKSCAKSXAFK 120
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG+++H +++K GF+LDL++ SLI MY G + DA+KV + D+V++ ++I GY
Sbjct: 121 EGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYA 180
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------------- 281
+ A ++FD +P +D+ +WN+ ISGY + G+ + A LF M
Sbjct: 181 SRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVT 240
Query: 282 -------------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
R V SW N +ID Y+K G + +A F + ++
Sbjct: 241 VLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKD 300
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V+SWN L+ Y Y E L LF M+R KPN+ +++S+L+ACA++G IDIG+WIH
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHV 360
Query: 376 YIQKCRIKPDV---LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
YI K R+K L TSL+ MYAKCG ++ A+ VFD+M +++ SWN+MI G+ MHG+
Sbjct: 361 YIDK-RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGR 419
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
A ++F M K G P+D TF+ +LSAC+H+GM+ G F M R YK+ PK+EHYG
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYG 479
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DL G +GL +++E++++ + ME +W +LL AC H N ELG+ AQ+L+++EP
Sbjct: 480 CMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPE 539
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
+PG YVLLSNIYA+ +W+EV R ++ +K ++K G S + E I+
Sbjct: 540 NPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/580 (37%), Positives = 344/580 (59%), Gaps = 46/580 (7%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
++ IH Q++ +GL ++A S++++ L + ++ F+ IQEP+ + NT+
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ + +DP AL Y M++ + N YTFP L K CA ++ +EG+++H ++K G
Sbjct: 63 FRGHALSSDPVSALKLYV-CMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
+LDL+V SLI MY G + DA KVF++ P D+V++ ++I GY + A+++FD
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLF-DLMPF------------------------ 282
+P +D+ +WN+MISGY + G+ + A LF D+M
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241
Query: 283 -RDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
R V SW N +ID Y+K G + +A F+ + ++V+SWN L+ Y
Sbjct: 242 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH 301
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV-- 386
Y E L LF M+R PN+ +++S+L ACA++G IDIG+WIH YI K R+K
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-RLKGVANA 360
Query: 387 -LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
L TSL+ MYAKCG ++ A VF+++ K++ SWN+MI G+ MHG+ + + ++F M K
Sbjct: 361 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRK 420
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G P+D TF+ +LSAC+H+GM+ G F M + YK+ PK+EHYGCM+DLLG +GL +
Sbjct: 421 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 480
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++EE+++ + ME +W +LL AC H N ELG+ AQ+L+++EP +PG YVLLSNIYA
Sbjct: 481 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYA 540
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
+ G+W+EV N R ++ +K ++K G S + E I+
Sbjct: 541 TAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFII 580
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/567 (38%), Positives = 346/567 (61%), Gaps = 6/567 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
LQ L C+ + + Q+H Q++ L +D A +++ L + +L+V F+ +QEP+
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISAL-SLCRQTNLAVRVFNQVQEPN 81
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+CN+++++ + P+ A F + +M + +++T+P L K C+G L K +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAF-FVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGE--VLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
I K G D++V N+LI YS CG V DA K+FE D V+WNSM+ G VK E
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ AR LFD MP+RD+ +WN+M+ GY +M A LF+ MP R+ VSW+ M+ GY+K
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 299 GNVTSARNCFDRMCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
G++ AR FD+M + +NVV+W I++A Y E RL D+M+ K + A+++S
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L AC G++ +G IHS +++ + + + +LL MYAKCG + A +VF+++ +K+
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+VSWN+M+ G G+HG G++A+E+F M + G P+ TFI VL +C HAG++ EG YF
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+++Y + P+VEHYGC+VDLLGR G ++++ ++V +PME +WGALL AC H+
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
++ K V +L++L+P DPG Y LLSNIYA+ W+ V ++R MK +EK G+S V
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEI 623
+ E V + + +Y MLG +
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/574 (37%), Positives = 340/574 (59%), Gaps = 46/574 (8%)
Query: 76 IHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
IH Q++ +GL ++A S++++ L + ++ F+ IQEP+ + NT+ + +
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+DP AL + Y M++ + N YTFP L K CA ++ REG+++H ++K G++LDL+
Sbjct: 66 SSDPVSAL-YLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V SLI MY G + DARKVF+ D+V++ ++I GY + A+++FD +P +D
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMP--------------------------FRDVVS 287
+ +WN+MISGY + G+ + A LF M R V S
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244
Query: 288 W-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
W N +ID Y K G V +A F+ + ++V+SWN L+ Y Y E
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS---TS 391
L LF M+R PN+ +++S+L ACA++G I+IG+WIH YI K R+K S TS
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK-RLKGVANASSHRTS 363
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ MYAKCG ++ A+ VFD++ +++ SWN+MI G+ MHG+ A ++F M K P+
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 423
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
D TF+ +LSAC+H+GM+ G F M+ YKI PK+EHYGCM+DLLG +GL +++EE++
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+ + ME +W +LL AC H N ELG+ AQ+L+++EP++PG YVLLSNIYA+ G+W+
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 543
Query: 572 EVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
EV +R ++ +K ++K G S + E I+
Sbjct: 544 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 577
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/584 (38%), Positives = 341/584 (58%), Gaps = 46/584 (7%)
Query: 84 GLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGAL 141
GL ++A S++L L + ++ F IQEP+ NT+++ + +DP AL
Sbjct: 4 GLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISAL 63
Query: 142 SFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHM 201
+ Y M++ + N YTFP L K CA ++ +EGK++HA+I+K G +DL V SLI M
Sbjct: 64 NLYV-YMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISM 122
Query: 202 YSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMI 261
Y+ G V DA KVF+ D+V++ +MI GY + A+++FD +P +D+ +WN+MI
Sbjct: 123 YAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMI 182
Query: 262 SGYVDVGDMEAANGLF------DLMP--------------------FRDVVSW------- 288
SGY ++G + A LF D+ P R + SW
Sbjct: 183 SGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFG 242
Query: 289 ------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
N +ID Y+K G + A F+ + ++V+SWN L+ Y + E L +F M
Sbjct: 243 SNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEM 302
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC--RIKPDVLLSTSLLTMYAKCG 400
++ PN+ +++S+L ACA++G IDIG+WIH YI K I + L TSL+ MYAKCG
Sbjct: 303 LKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG 362
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++ A VFD + K++ S N+MI G+ MHG+ + A ++ M+K G P+D TF+ +LS
Sbjct: 363 NIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+HAG+ G F M Y+IEPK+EHYGCM+DLLGR+GL +++EEL++ + ME
Sbjct: 423 ACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDG 482
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+WG+LL AC H N ELG+++AQ LM++EP++PG YVLLSNIYA+ +WD+V +R ++
Sbjct: 483 VIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLL 542
Query: 581 KEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEI 623
+K L+K G S + E ++ + P K I Y ML EI
Sbjct: 543 NDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEI-YKMLEEI 585
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 336/561 (59%), Gaps = 49/561 (8%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTS--LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
IH Q++ +GL ++A S++L+ S ++ FD IQEP+ + NT+ + +
Sbjct: 7 IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+DP AL Y M++ + + YTFP L K CA + +EG+++H ++K GF+LD++
Sbjct: 67 SSDPVSALKLYL-VMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIY 125
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V SLI MY+ G + DARKVF+ D+V++ ++I GYV + A++LFD +P +D
Sbjct: 126 VHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKD 185
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPF---------------------------RDVV 286
+ +WN+MISGYV+ G+ + A LF M R V
Sbjct: 186 VVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVH 245
Query: 287 SW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
SW N +ID Y+K G V +A FD + ++V+SWN L+ Y Y
Sbjct: 246 SWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYK 305
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL----LS 389
E L LF M+R PN+ +++S+L ACA++G IDIG+WIH YI K ++K V L
Sbjct: 306 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINK-KLKGVVTNVSSLQ 364
Query: 390 TSLLTMYAKCGVMDLARNVFDN-MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
TSL+ MYAKCG +D A+ VFD+ M+ +++ +WN+MI G+ MHG+ A ++F M G
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P+D TF+ +LSAC+H+GM+ G F M R Y+I PK+EHYGCM+DLLG +GL +++E
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAE 484
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
E+++ +PME +W +LL AC H N ELG+ A+ L+++EP + G YVLLSNIYA+ G
Sbjct: 485 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAG 544
Query: 569 KWDEVENLRRIMKEKELEKAV 589
+W+EV +R ++ +K ++K V
Sbjct: 545 RWNEVAKIRALLNDKGMKKKV 565
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 319/538 (59%), Gaps = 34/538 (6%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS--LSSVSLSVLFFDGI 116
PIL E +++ E HQ H +L SGL +FAASR++ + T+ ++ + F I
Sbjct: 9 PILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRI 68
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P+++M NTI++++ P AL+ +++ + A + + YTF K C + EG
Sbjct: 69 PNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLP-DKYTFTFALKSCGSFSGVEEG 127
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+++H ++K G DLF++N+LIH+Y+ CG + DAR
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDAR------------------------ 163
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
L D M ERD+ +WN+++S Y + G ME A LFD M R+V SWN MI GY
Sbjct: 164 -------HLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYV 216
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
+G + AR F ++NVVSWN ++ Y + E L LF+ M KP+ +L+S
Sbjct: 217 GVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVS 276
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL+ACA++G + G+W+H+YI K I D ++T+L+ MY+KCG ++ A VF++ K+
Sbjct: 277 VLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKD 336
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+ +WNS+I G HG G+ AL++F EM G PN+ TF+CVLSAC+ AG++ EG F+
Sbjct: 337 ISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFN 396
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
LM ++ I+P +EHYGCMVDLLGR GL+ ++EELV K+P + +W +LL AC H N
Sbjct: 397 LMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNV 456
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EL + VAQ L+EL P++ +V LSN+YAS G+W +V +R+ M+ + + K G S++
Sbjct: 457 ELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMI 514
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/584 (39%), Positives = 351/584 (60%), Gaps = 45/584 (7%)
Query: 56 LSH-PILQKLESCSTVKEFH--QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLS--- 109
LSH IL L + T H Q H +L +G QDS+ A ++K ++ LS
Sbjct: 30 LSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFES 89
Query: 110 -VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+ FD +++P+ F+ N ++K + N+PF A+ YYE M+A F N YT+P + K C+
Sbjct: 90 SLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHF-RPNKYTYPAVLKACS 148
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ EG +VHA +VK G D + +S I MY+ G +++AR++ +D
Sbjct: 149 DAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD----------- 197
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
K EV D WN+MI GY+ G++EAA LF+ MP R ++S
Sbjct: 198 ------KGGEV-------------DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMIST 238
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
WN MI G+++ G V AR FD M R+ +SW+ ++ Y++ + E L +F +M +
Sbjct: 239 WNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKI 298
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P + L SVL+ACAN+G +D G+WIH+Y ++ I+ D +L TSL+ MYAKCG +DLA
Sbjct: 299 RPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWE 358
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ M+ K V SWN+MI G MHG+ E A+++F +M+ PN+ TF+ VL+AC H G+
Sbjct: 359 VFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGL 415
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V +G F+ M++ Y +EP++EHYGC+VDLLGRAGL+ ++E++VS +P E PA+WGALL
Sbjct: 416 VQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALL 475
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H N ELG+ V + L+ELEP++ G Y LLSNIYA G+W+EV +R++MKE+ ++
Sbjct: 476 GACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKT 535
Query: 588 AVGSSLVH--PGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
G+S++ GE I + P K I Y ML ++ +++M
Sbjct: 536 TPGTSIIDLGRGEVHKFIIGDGSHPQVKDI-YQMLDKVKERLQM 578
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/533 (38%), Positives = 319/533 (59%), Gaps = 32/533 (6%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
++ L L+SC + ++ +IH QL+++G +D+F A++ ++ S ++ + F GI
Sbjct: 27 NYKTLSALQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGI 86
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
PD++ T+++ F+ +P AL FY M + VE N +TF + K S +EG
Sbjct: 87 NYPDSYSWTTMIRGFVEAKNPEKALEFY-GLMRQRGVELNKFTFLFVLKAYGLRPSYQEG 145
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+ VH ++VK GF D+F RN+ +I Y+K
Sbjct: 146 RIVHGKLVKVGFCYDVFTRNA-------------------------------LIHMYLKC 174
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
+ A LFD MP ++ TWN+MI+G GD E A LF MP R+V SWN ++ GY+
Sbjct: 175 GSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYS 234
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K+G+V AR+ FD M R+VVSW +++ YV+ E L LF M+ + + S
Sbjct: 235 KLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITS 294
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L+ACA +G +D+G+WIH+Y+++ +++ DV L T+L+ MYAKCG +D A VF+ M KN
Sbjct: 295 ILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKN 354
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+ SWN+M+ G +HG G ALE+F +ME G PND TF+ VLSAC+H G V EGW F+
Sbjct: 355 LCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFN 414
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M + + I PKVEHYGCMVD+L R GL+ +++E++ +P+E +WGALL+AC H +
Sbjct: 415 QMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYT 474
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
+G+ V ++ +L D G YVLLSNI+A++ +W+EVE R++MK+ +EK +
Sbjct: 475 NVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKI 527
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/632 (36%), Positives = 350/632 (55%), Gaps = 46/632 (7%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P P +N R +HP L ++ CS K+ QIH Q+L +GL D F+ASR++
Sbjct: 20 PNPNSITLNNDRY---FANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITA 76
Query: 99 LCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
S S+ + FD I P+ + NT+++++ ++P +L + + +
Sbjct: 77 AALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDK 136
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
+TFP L K + + L GK H ++K D+F+ NSLIH Y+ CGE+ +VF +
Sbjct: 137 FTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVN 196
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI-------------------FTW- 257
P D+V+WNSMI +V+ A ELF M +++ F +
Sbjct: 197 IPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 258 -------------------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
N+M+ Y G +E A LFD MP +D+VSW M+ GYAKI
Sbjct: 257 RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSV 357
G +A+ FD M +++ +WN L++ Y +C E L LF + + AKP+E +L+S
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
L+ACA +G +D+G WIH YI+K +K + L+TSL+ MY KCG + A VF ++ K+V
Sbjct: 377 LSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDV 436
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
W++MI G MHG G+ A+ +F +M++ PN TF +L AC+H G+V EG +F+
Sbjct: 437 FVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 496
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M+ +Y + P V+HY CMVD+LGRAGL+ ++ EL+ K+PM ++WGALL AC+ H N
Sbjct: 497 MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVV 556
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
L + L+ELEP + G YVLLSNIYA GKWD V LR++M++ L+K G S +
Sbjct: 557 LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 616
Query: 598 EFASESIV-ENCPPHRKCIVYSMLGEIGAQMK 628
E +V +N P K I Y+ L EI A+++
Sbjct: 617 GIVHEFLVGDNSHPSAKKI-YAKLDEIVARLE 647
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/613 (35%), Positives = 357/613 (58%), Gaps = 41/613 (6%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK-KLCTSLSSVSLSVLFFDG 115
+H IL ++ CS+ K+ ++H ++L +GL D F+AS++ +S S++ + FD
Sbjct: 25 NHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQ 84
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I +P+ + NT+++++ +DPF + + + + N +TFP + K + +++ R
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRV 144
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G VH +K F +DL++ NSL+ Y CG++ A ++F+ D+V+WNSMI + +
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQ 204
Query: 236 NREVGFARELF------DFMP----------------------------ER-----DIFT 256
A ELF + MP ER D+
Sbjct: 205 GNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTL 264
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
N+M+ Y G ++ A LFD MP RDV SW M+DGYAK+G+ +AR F+ M ++ +
Sbjct: 265 CNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324
Query: 317 VSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+WN+L++ Y + E L +F+ + + AKP+E +L+S L+ACA +G ID+G WIH
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV 384
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
YI++ I + L +SL+ MYAKCG ++ A VF ++ E++V W++MI G GMHG+G+
Sbjct: 385 YIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKA 444
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+++F EM++ PN TF VL AC+HAG+V EG +F M+ +Y + P+++HY CMV
Sbjct: 445 AIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMV 504
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+LGRAG + ++ EL++++ ++WGALL ACS H N ELG++ + L++LEPR+ G
Sbjct: 505 DILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHG 564
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
VLLSNIYA G+W++V LR++M++ EL+K G S + E +V +
Sbjct: 565 AIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSN 624
Query: 616 VYSMLGEIGAQMK 628
+YS L EI ++K
Sbjct: 625 IYSKLEEIATKLK 637
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/574 (39%), Positives = 340/574 (59%), Gaps = 11/574 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS---SVSLSVLFFDGIQ 117
L L C+ + + Q+H Q+L S L D F V+ KL ++ S + L+ F+ +Q
Sbjct: 24 LSDLHKCTNLNQVKQLHAQILKSNLHVDLF----VVPKLISAFSLCRQMLLATNAFNQVQ 79
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ + NT++++ + P A + ++ N +TFP L KVC G L +
Sbjct: 80 YPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADN-FTFPFLLKVCTGNVWLPVIE 138
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGE--VLDARKVFED-GPVWDLVTWNSMIDGYV 234
VHA+I K GF D+FV NSLI YS CG + A+K+F G D+V+WNSMI G
Sbjct: 139 SVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLA 198
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
K AR++FD MPE+D +WN+M+ GYV VG M+ A LFD MP R+VVSW+ M+ G
Sbjct: 199 KGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLG 258
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y K G++ AR FD+M ++N+VSW I+++ + E + LFD+M + K + ++
Sbjct: 259 YCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTV 318
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
MS+L ACA G++ +G+ IH+ I+ K +S +L+ MYAKCG +++A +VF+++
Sbjct: 319 MSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKN 378
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
K+VVSWN+M+ G MHG G KALE+F M++ G +PN T I VL ACTHAG++ +G Y
Sbjct: 379 KDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRY 438
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M+R Y + P+VEHYGCMVDLLGR G + ++ L+ +PM +WG LL AC H+
Sbjct: 439 FSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHN 498
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EL + V HL+ELEP D G + +LSNIYA+ G W+ V N R M+ +K G+S +
Sbjct: 499 AVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSI 558
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E V + + +Y ++ + ++K
Sbjct: 559 EVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELK 592
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 356/611 (58%), Gaps = 46/611 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFD 114
+HP L L +C T++ IH Q++ GL ++A S++++ L + ++ F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
IQEP+ + NT+ + + +DP AL Y M++ + N YTFP + K CA ++ +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYV-CMISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG+++H ++K G +LDL+V SLI MY G + DA KVF+ P D+V++ ++I GY
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF-DLMPF----------- 282
+ A++LFD +P +D+ +WN+MISGY + G+ + A LF D+M
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 283 --------------RDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
R V W N +ID Y+K G + +A F+R+ ++
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V+SWN L+ Y Y E L LF M+R PN+ +++S+L ACA++G IDIG+WIH
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 376 YIQKCRIKPDV---LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
YI K R+K L TSL+ MYAKCG ++ A VF+++ K++ SWN+MI G+ MHG+
Sbjct: 392 YIDK-RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
+ + ++F M K G P+D TF+ +LSAC+H+GM+ G F M + YK+ PK+EHYG
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DLLG +GL +++EE+++ + ME +W +LL AC H N ELG+ A++L+++EP
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+PG YVLLSNIYAS G+W+EV R ++ +K ++K G S + E I+ + R
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 630
Query: 613 KCIVYSMLGEI 623
+Y ML E+
Sbjct: 631 NREIYGMLEEM 641
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/596 (38%), Positives = 353/596 (59%), Gaps = 44/596 (7%)
Query: 41 PKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC 100
PK T+ +L + H L + +++ Q H +L +G QDS+ A ++K
Sbjct: 21 PKGHSTETSKLSHKAILH--LLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYA 78
Query: 101 TSLSSVSLS----VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
++ LS + FD +++P+ F+ N ++K + N+PF A+ YYE M+ N
Sbjct: 79 NVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYE-MVVAHSRPN 137
Query: 157 HYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
YT+P + K C+ + EG +VHA +VK G D + +S I MY+ G +++AR++ +
Sbjct: 138 KYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILD 197
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL 276
D K EV D WN+MI GY+ G++EAA L
Sbjct: 198 D-----------------KGGEV-------------DAVCWNAMIDGYLRFGEVEAAREL 227
Query: 277 FDLMPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
F+ MP R ++S WN MI G+++ G V AR FD M R+ +SW+ ++ Y++ + E
Sbjct: 228 FEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEA 287
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L +F +M + +P + L SVL+ACAN+G +D G+WIH+Y ++ I+ D +L TSL+ M
Sbjct: 288 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 347
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAKCG +DLA VF+ M+ K V SWN+MI G MHG+ E A+++F +M+ PN+ TF
Sbjct: 348 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITF 404
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL+AC H G+V +G F+ M++ Y +EP++EHYGC+VDLLGRAGL+ ++E++VS +P
Sbjct: 405 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 464
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
E PA+WGALL AC H N ELG+ V + L+ELEP++ G Y LLSNIYA G+W+EV
Sbjct: 465 TEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGE 524
Query: 576 LRRIMKEKELEKAVGSSLVH--PGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+R++MKE+ ++ G+S++ GE I + P K I Y ML ++ +++M
Sbjct: 525 VRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDI-YQMLDKVKERLQM 579
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/550 (38%), Positives = 326/550 (59%), Gaps = 38/550 (6%)
Query: 49 QRLPIVDLSHPILQKL---ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLS 104
+ +P L + KL +S ++++ Q+H +L SG QD + + +LK S
Sbjct: 22 KNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFS 81
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
+ ++ F I P+ F+ N ++K L N F A+ FY M N +T+P L
Sbjct: 82 NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFY--GRMVIDARPNKFTYPTLF 139
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K C+ ++++EG+++H +VK G D+ ++++ IHMY+ G + DARK+F G
Sbjct: 140 KACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG------ 193
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
E D+ WN+MI GY+ G +EAA GLF MP ++
Sbjct: 194 --------------------------ESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKN 227
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+ SWN MI+G AK GN+ AR FD M R+ +SW+ ++ Y+ Y E L +F +M R
Sbjct: 228 IGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR 287
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ +P L SVL AC+N+G ID G+W+H+Y+++ IK D +L T+LL MYAKCG +D+
Sbjct: 288 EETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDM 347
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
VF+ M E+ + +WN+MI G +HG+ E ALE+F ++++ PN T + VL+AC H
Sbjct: 348 GWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAH 407
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG V +G F M+ Y ++P++EHYGCMVDLLGR+GL ++E+L++ +PM+ A+WG
Sbjct: 408 AGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWG 467
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
ALL AC H N +L + V + L+ELEP++ G YVLLSNIYA G++D+V +R++MK++
Sbjct: 468 ALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRG 527
Query: 585 LEKAVGSSLV 594
++ G S+V
Sbjct: 528 IKTVPGVSIV 537
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/491 (40%), Positives = 307/491 (62%), Gaps = 2/491 (0%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD I EP+A + N + + + N+ + + +M V N +TFP++ K C I +
Sbjct: 8 FDQIPEPNASIWNAMFRGYSQ-NESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINA 66
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L+EG++VH ++K GF + FV +LI MY+ G + A +VF + +++ W +MI+G
Sbjct: 67 LKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMING 126
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
Y+ ++ AR LFD PERDI WN+MISGY++ D+ A LFD MP +DV+SWN ++
Sbjct: 127 YITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVL 186
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNE 351
+GYA G+V + F+ M RNV SWN L+ Y R + E L F RM + G PN+
Sbjct: 187 NGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPND 246
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
A+L++VL+ACA +G +D+G+W+H Y + K +V + +L+ MYAKCGV++ A +VF +
Sbjct: 247 ATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKS 306
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M K+++SWN++I G +HG G AL +F M+ G P+ TFI +L ACTH G+V +G
Sbjct: 307 MDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDG 366
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+ YF M Y I P++EHYGC+VDLLGRAGL+ + + + K+P+EA +W ALL AC
Sbjct: 367 FSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACR 426
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
+ N EL ++ + L+E EP++P YV+LSNIY G+W +V L+ M++ +K G
Sbjct: 427 VYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKLPGC 486
Query: 592 SLVHPGEFASE 602
SL+ ++ E
Sbjct: 487 SLIEVNDYLVE 497
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 139/349 (39%), Gaps = 62/349 (17%)
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC----------- 290
A ++FD +PE + WN+M GY + LF M DV+ NC
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMP-NCFTFPVILKSCV 62
Query: 291 -----------------------------MIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ID YA G + +A F M RNV++W
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ Y+ C D RLFD D VL G I+ I + +
Sbjct: 123 MINGYITCCDLVTARRLFDLAPERDI---------VLWNTMISGYIEAKDVIRARELFDK 173
Query: 382 I-KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF 440
+ DV+ ++L YA G + +F+ M E+NV SWN++I GY +G + L F
Sbjct: 174 MPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAF 233
Query: 441 MEMEKRGP-TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
M G PNDAT + VLSAC G + G W + + + V ++D+
Sbjct: 234 KRMLVDGTVVPNDATLVNVLSACARLGALDLGKW-VHVYAESHGYKGNVYVRNALMDMYA 292
Query: 500 RAGLMR---------DSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ G++ D+++L+S + G A+ G A + S+ ++
Sbjct: 293 KCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIA 341
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%)
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+A FD++ N WN + Y + + + + + LF +M D PN + +L +C
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCV 62
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+ + G+ +H ++ K + + ++T+L+ MYA G + A VF M E+NV++W +
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 423 MIMGY 427
MI GY
Sbjct: 123 MINGY 127
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
M+ A VFD + E N WN+M GY + + + +F +M+ PN TF +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 462 CTHAGMVLEG-WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
C + EG + +++ ++ P V ++D+ G + + + ++ +E
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVAT--TLIDMYASGGAIHAAYRVFGEM-IERNV 117
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEP 551
W A+++ T + + A+ L +L P
Sbjct: 118 IAWTAMINGYITCCD----LVTARRLFDLAP 144
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 328/544 (60%), Gaps = 11/544 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAAS-RVLKKLCTSLSSVSLSVLFFDGIQ 117
+L +L +C + Q H LL SG L+ S +L L + S+ +L+ + F +
Sbjct: 13 LLSRLRACRSASHALQCHALLLTSGHLAASPLRLSNHLLLALASVPSAAALADVVFARLP 72
Query: 118 EP---DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
P D F NT ++ P AL Y+ +M V + YTFP + K C R
Sbjct: 73 LPAARDPFAWNTAIR-LHAPARPRAAL-LYFARMRRCGVRPDAYTFPAVLKACGCAPGCR 130
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED--GPVWDLVTWNSMIDG 232
G VHA V+ G DLF N+LI Y ++ RKVF++ G DLV+WNSM+ G
Sbjct: 131 AGLLVHAEAVRRGLAADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSMVAG 190
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD--MEAANGLFDLMPFRDVVSWNC 290
YV E+G A+E+FD MP++D F+W ++I GY G ++ A LFD MP RD+V WN
Sbjct: 191 YVGCGEMGLAQEMFDEMPQKDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDLVCWNS 250
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MIDGYA+ G + AR+ F+ M RNV+SW+I++ +V C + E L F M+R +P+
Sbjct: 251 MIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPD 310
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + ++ACA +G ++ G+W+HSY++K ++ DV++ T+L+ MY KCG +DLA +F+
Sbjct: 311 RIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFE 370
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+M E++VV+WN MI+G G HG G A+ +F ME +D + + +L+ACTHAG+V E
Sbjct: 371 SMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVSE 430
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F M++ + I+PKVEHYG +VDLLGRAG + + + +PME P LWG+LL+AC
Sbjct: 431 GLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAAC 490
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+HS EL ++ + L +L D G YVLLSNIYA EG W +V +R++M ++ + K +G
Sbjct: 491 RSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIG 550
Query: 591 SSLV 594
S++
Sbjct: 551 RSVI 554
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 326/544 (59%), Gaps = 11/544 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSG--LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
+L +L +C + Q H LL SG + ++ +L + + + L+ F +
Sbjct: 13 LLSRLRACRSASHAIQCHALLLTSGHLAASPLRLSNLLLLAIASVPGAAPLADAVFARLP 72
Query: 118 EP---DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
EP D F NT ++ P AL Y+ +M + V + YTFP + K C R
Sbjct: 73 EPAARDPFPWNTAIR-LHAPGRPRAAL-LYFARMRSCGVRPDAYTFPAVLKACGCAPGCR 130
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED--GPVWDLVTWNSMIDG 232
G VHA V+ G DLF N+LI Y + + RKVF++ G DLV+WNSM+ G
Sbjct: 131 AGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGVSRDLVSWNSMVAG 190
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD--MEAANGLFDLMPFRDVVSWNC 290
YV E+G A+ELFD MP+RD F+W ++I GY G ++ A LFD M RD+V WN
Sbjct: 191 YVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRARELFDQMTERDLVCWNS 250
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MIDGYA+ G + AR+ F+ M RNV+SW+I++ +VRC + E L F M+R +P+
Sbjct: 251 MIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPD 310
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + ++ACA +G ++ G+W+HSY++K ++ DV++ T+L+ MY KCG MDLA +F+
Sbjct: 311 RVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFE 370
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+M E++VV+WN MI+G G HG G A+ +F ME +D + + +L+ACTHAG+V E
Sbjct: 371 SMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAGLVSE 430
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F M++ + I+PKVEHYG +VDLLGRAG + + + +PME P LWG+LL+AC
Sbjct: 431 GLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAAC 490
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+HS EL ++ + L L D G YVLLSNIYA EG W +V +R++M ++ + K +G
Sbjct: 491 RSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIG 550
Query: 591 SSLV 594
S++
Sbjct: 551 RSVI 554
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/569 (40%), Positives = 341/569 (59%), Gaps = 10/569 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQE 118
L L C+ + +QIH Q+L + L QD F A +++ LC L+S +V F+ +
Sbjct: 25 LCDLHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLAS---AVNVFNHVPH 81
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ + N+I+++ N +L F + +M + +++T+P L K C+G SL +
Sbjct: 82 PNVHLYNSIIRAHAH-NSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVR 140
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEV-LD-ARKVFEDGPVWDLVTWNSMIDGYVK 235
+HA + K GF D+FV NSLI YS CG LD A +F D+VTWNSMI G V+
Sbjct: 141 MIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVR 200
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
E+ A +LFD MP+RD+ +WN+M+ GY G+M+ A LF+ MP+R++VSW+ M+ GY
Sbjct: 201 CGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGY 260
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
+K G++ AR FDR ++NVV W ++A Y E L+ +M +P++ L+
Sbjct: 261 SKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLL 320
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TE 414
S+L ACA G++ +G+ IH+ +++ R + + + + MYAKCG +D A +VF M +
Sbjct: 321 SILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAK 380
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
K+VVSWNSMI G+ MHG GEKALE+F M + G P+ TF+ +L ACTHAG+V EG Y
Sbjct: 381 KDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKY 440
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M+++Y I P+VEHYGCM+DLLGR G ++++ L+ +PME + G LL+AC H+
Sbjct: 441 FYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHN 500
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ +L + V + L +LEP DPG Y LLSNIYA G W V N+R MK EK G+S +
Sbjct: 501 DVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSI 560
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEI 623
E E V + + +Y M+ +
Sbjct: 561 EVEEEVHEFTVFDQSHPKSDDIYQMIDRL 589
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 324/550 (58%), Gaps = 38/550 (6%)
Query: 49 QRLPIVDLSHPILQKL---ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLS 104
+ +P L + KL +S ++++ Q+H +L SG QD + + +LK S
Sbjct: 22 KNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFS 81
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
+ ++ F I P+ F+ N ++K L N F A+ FY M N +T+P L
Sbjct: 82 NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFY--GRMVIDARPNKFTYPTLF 139
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K C+ ++++EG+++H +VK G D+ ++++ I MY+ G + DARK+F G
Sbjct: 140 KACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSG------ 193
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
E D+ WN+MI GY+ G +EAA GLF MP ++
Sbjct: 194 --------------------------ESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKN 227
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+ SWN MI+G AK GN+ AR FD M R+ +SW+ ++ Y+ Y E L +F +M R
Sbjct: 228 IGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR 287
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ +P L SVL AC+N+G ID G+W+H+Y+++ IK D +L T+LL MYAKCG +D+
Sbjct: 288 EETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDM 347
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
VF+ M E+ + +WN+MI G +HG+ E ALE+F ++++ PN T + VL+AC H
Sbjct: 348 GWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAH 407
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG V +G F M+ Y ++P++EHYGCMVDLLGR+GL ++E+L++ +PM+ A+WG
Sbjct: 408 AGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWG 467
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
ALL AC H N +L + V + L+ELEP++ G YVLLSNIYA G++D+V +R++MK +
Sbjct: 468 ALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRG 527
Query: 585 LEKAVGSSLV 594
++ G S+V
Sbjct: 528 IKTVPGVSIV 537
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/567 (38%), Positives = 346/567 (61%), Gaps = 6/567 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
LQ L C+ + + Q+H Q++ L QD A +++ L +L++ F+ +QEP+
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLC-RQTNLALRVFNQVQEPN 81
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+CN+++++ + + P+ A F + +M + +++T+P L K C+G+ L K +H
Sbjct: 82 VHLCNSLIRAHALNSQPYQAF-FVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMH 140
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGE--VLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
I K G D++V N+LI YS CG V DA K+FE D V+WNSM+ G VK E
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ AR+LFD MP+RD+ +WN+M+ GY +M A LF+ MP R+ VSW+ M+ GY+K
Sbjct: 201 LRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 299 GNVTSARNCFDRMCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
G++ AR FD+M +NVV+W I++A Y E +L D+M+ + + A+ +S
Sbjct: 261 GDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAIS 320
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L ACA G++ +G HS I+K + + + +LL MYAKCG + A +VF++M +K+
Sbjct: 321 ILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKD 380
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+VSWN+M+ G G+HG G++A+E+F M K G P+ TFI VL +C HAG++ EG YF
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+++Y + PKVEHYGC+VDLLGR G ++++ ++V +PME +WGALL AC H+
Sbjct: 441 SMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
++ K V +L++L+P DPG Y LLSNIYA+ W+ V ++R MK +EK G+S V
Sbjct: 501 DIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEI 623
+ E V + + +Y MLG +
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/542 (42%), Positives = 328/542 (60%), Gaps = 14/542 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSVSLSVLFF----D 114
+L +L +C++ Q H LL SG L+ S +L S S+VS + F
Sbjct: 12 LLSRLRACTSASHALQCHALLLTSGHLAASPLRLSNLLLLALASASAVSHADAVFARLLP 71
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA-GIRSL 173
G DAF NT+++ P AL+ Y+ M VE + YTFP + K CA G+ L
Sbjct: 72 GPASRDAFPWNTLIR-LHAPASPRNALA-YFACMRRAAVEPDAYTFPAVLKACACGVLGL 129
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
VHA V+ G + DLF RN+L+ Y G+ RKVF+ G DLV+WNSM+ GY
Sbjct: 130 ----PVHAEAVRTGMDGDLFTRNALVSFYCRIGDCRSGRKVFDHG-ARDLVSWNSMVAGY 184
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVD-VGDMEAANGLFDLMPFRDVVSWNCMI 292
V E+ A+ELFD MP RD F+W +MI Y G ++ A LFD P RD+V W MI
Sbjct: 185 VACGELELAQELFDGMPLRDAFSWATMIDAYGKRSGGVDRARELFDETPNRDLVCWCSMI 244
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
DGYA+ G + AR F+ M RNV+SW+I++ YVRC + E L LF RM+R KP+
Sbjct: 245 DGYARQGRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCGIKPDRV 304
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ + TACA +G ++ G+W+HSY++K ++ DV++ T+L+ MY KCG +DL + +F++M
Sbjct: 305 AAVGAFTACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKLIFESM 364
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+K+VV+WN MI+G G H G A+++F +ME G +D + + VL+ACTHAG++ EG
Sbjct: 365 PDKSVVTWNVMIIGLGTHSCGLHAVKLFYQMEAEGAPIDDLSVLAVLTACTHAGLISEGL 424
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M++ + ++PKVEHYG +VDLLGRAG + + + +PME P LWG+LL+AC +
Sbjct: 425 GIFHRMRKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPTPELWGSLLAACRS 484
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H EL ++ + L L D G YVLLSNIYA EG WD V +RR+M + ++K +G S
Sbjct: 485 HRCVELAELSVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKKDIGRS 544
Query: 593 LV 594
++
Sbjct: 545 VI 546
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/544 (37%), Positives = 319/544 (58%), Gaps = 15/544 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L +C T HQI Q++ GL + + + C L + + FD +P+
Sbjct: 29 LRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITA-CARLGGIRRARRVFDKTAQPNGAT 87
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N + + + N + + +M N +TFP++ K CA + +EG++VH +
Sbjct: 88 WNAMFRGYAQANCHLDVVVLF-ARMHRAGASPNCFTFPMVVKSCATANAAKEGEEVHCVV 146
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVL--DARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
K GF+ + FV +LIHMYS+ G V DA KVF + ++ W +++ +V R++
Sbjct: 147 AKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVS 206
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
AR LFD P+RD+ WN ++SGY+++GDM AA LFD MP RDV+SWN ++ GYA G V
Sbjct: 207 ARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEV 266
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM---IRGDAK--------PN 350
S F+ M +RNV SWN L+ YVR + E L F RM + G+ K PN
Sbjct: 267 ESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPN 326
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ ++++VLTAC+ +G +++G+W+H Y + K ++ + +L+ MYAKCGV++ A +VFD
Sbjct: 327 DYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFD 386
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+ K++++WN++I G MHG AL +F M++ G P+ TF+ +LSACTH G+V
Sbjct: 387 GLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRN 446
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G +F M Y I P++EHYGCMVDLLGRAGL+ + ++V K+PME +W ALL AC
Sbjct: 447 GLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGAC 506
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+ N E+ ++ Q L+ELEP +PG +V++SNIY G+ +V L+ M++ K G
Sbjct: 507 RMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPG 566
Query: 591 SSLV 594
S++
Sbjct: 567 CSVI 570
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/580 (36%), Positives = 345/580 (59%), Gaps = 12/580 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L +E+C+ +++ QIH + ++S LS F ++++ S + + + F+ QEP
Sbjct: 9 VLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSF-LSHACLDYATQVFNQTQEP 67
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D F+ N +++++ P A+S Y + + + + YT+P + K CA ++ +GK+V
Sbjct: 68 DGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEV 127
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H IV+ G+ELD F+++SL++ Y VCGE+ +A++VF++ D+V WN++I GY + V
Sbjct: 128 HGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMV 187
Query: 240 ----GFARELFDFMPER-DIFTWNSMISGYVDVGDMEAANGLFDLM----PFRDVVSWNC 290
G +E+ + R + T +I ++ +++ + M R+ V
Sbjct: 188 LDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEA 247
Query: 291 -MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
+I+ Y K G + AR FD + +N V WN L+ Y + E + L M + KP
Sbjct: 248 ALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKP 307
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ ++ VL+ACA MG ++G W+H + +K I DV + T+L+ MYAKCG + AR VF
Sbjct: 308 DRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVF 366
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D M E+NV +WN+++ GY HGQ E A+E+F EM + G P+ TF+ VL AC H+G+V
Sbjct: 367 DQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVE 426
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
G YFDLM + YKI P+VEHYGCMVDLLGRAGL++++ EL+ + +E +WGALLSA
Sbjct: 427 NGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSA 486
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
CS H N E+G+ A H+++L D G YV+L+N+YAS +++ V+ +R +M EK + K+
Sbjct: 487 CSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSH 546
Query: 590 GSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
G S++ G+ E +V + R +YS+L E+ ++KM
Sbjct: 547 GCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKM 586
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 345/591 (58%), Gaps = 43/591 (7%)
Query: 42 KFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT 101
KFT +Q+ I+DL + +S +++ Q+H L +G QD + + ++K
Sbjct: 21 KFTSQLSQK-TILDLLNT-----KSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYAN 74
Query: 102 -SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
S+++ ++ F+ + P+ F+ N I+K L N+P A+ YY KMM N +T+
Sbjct: 75 PHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYY-KMMIAHARPNKFTY 133
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF-EDGP 219
P L K C + EG +VHA ++K G D+ +R++ I MY GEV AR++ EDG
Sbjct: 134 PTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDG- 192
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
D+ +N+MI GY+ G++EAA LF
Sbjct: 193 -------------------------------NSDVICFNAMIDGYLKCGEVEAAKELFWS 221
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
M ++V SWN M+ G AK G + AR F+ M +N +SW+ ++ Y++ Y E L +F
Sbjct: 222 MEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVF 281
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+ M R + +P + L SVL ACAN+G +D G+WIH+Y+ D +L T+L+ MYAKC
Sbjct: 282 NVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKC 341
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +D+A +VF+ M +K V +WN+MI G GMHG+ E A+E+F +M+K+ PN T + VL
Sbjct: 342 GRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVL 401
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC H+GMV EG F+ M+ +Y IEP +EHYGC+VDLLGRAGL+ ++EE++ +PME
Sbjct: 402 SACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPS 461
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
A+WGALL AC H + ELG+ V + L+ELEP++ G Y LLSNIYA G+WD+V N+R++
Sbjct: 462 AAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKL 521
Query: 580 MKEKELEKAVGSSLVHPGEFASE-SIVENCPPHRKCIVYSMLGEIGAQMKM 629
MKE+ ++ + G S++ E + + P K I Y ML + ++KM
Sbjct: 522 MKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNI-YLMLKNMIKRLKM 571
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/532 (37%), Positives = 320/532 (60%), Gaps = 5/532 (0%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++SC T+ HQ H ++ GL QD F S L + +SVS S F+ + P F+
Sbjct: 16 IKSCKTIPHLHQFHAHIIHKGLEQDHFIISHFL----SISTSVSYSTSIFNRLLNPSTFL 71
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++K F + S +Y +++ + YT+PLL KVC+ L+EG+ VH
Sbjct: 72 YNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCSNELRLKEGEIVHGSA 131
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
++CG D++V +SLI Y C E+L ARKVF++ P ++V+W +M+ GY ++ A+
Sbjct: 132 IRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAK 191
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+F+ MPER++ +WN+MISG GD+ A +FD M R+VVS+ MIDGYAK+G++ S
Sbjct: 192 RVFERMPERNLPSWNAMISGLGKAGDLSGARKVFDEMVERNVVSFTVMIDGYAKVGDMAS 251
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FD ++VV+W+ L++ Y R + E +++F M+ + KP+E ++S+++AC+
Sbjct: 252 ARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQ 311
Query: 364 MGVIDIGQWIHSYIQKCRIKP-DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G D+ +W+ SY+ + I + +L+ M+AKCG M+ A +F +M ++++ S
Sbjct: 312 LGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCS 371
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I G +HG+G +A+E+F M G P+ F +L+AC+ G++ +GW +FD M+ Y
Sbjct: 372 LIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKY 431
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
+ P HY CMVDLL RAG +R + +L+ +P++ WGALL AC H + EL + V
Sbjct: 432 SVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEV 491
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A L+ELEP G YVLLSNIYAS +W +V +R MKE+ + K G S +
Sbjct: 492 ANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIRKIPGCSYI 543
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 330/543 (60%), Gaps = 22/543 (4%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
D + I L++C+T Q+H +++ GL QD F S+ L LC SLS+ S + F+
Sbjct: 23 DTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLT-LCNSLSNFSYTTSVFN 81
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
G+ P + NT +K + +S + + V + +T+P L K C+ + ++
Sbjct: 82 GVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVP-DKFTYPSLIKACSKVCGVK 140
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG H V+CG D+FV SLI +Y CGE+L ARKVF++ ++V+W +MI GY
Sbjct: 141 EGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYA 200
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
++ AR+LFD MPE++ +WN++ISGYV GD+ +A +FD MP R+VVS+ MIDG
Sbjct: 201 SFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDG 260
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK G++ SAR F+ R+VV+W+ L+ + C ++ + KP+E +
Sbjct: 261 YAKSGDMASARFVFEEAPERDVVAWSALI--FRVCAEW-------------NVKPDEFIM 305
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRI---KPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+S+++AC+ MG +++ +W+ Y++K I + V+ +L+ M AKCG MD A +F+
Sbjct: 306 VSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVI--AALIDMNAKCGSMDRATKLFEE 363
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M +++++S+ SM+ G +HG G +A+ +F M G TP+D F +L+AC+ AG+V EG
Sbjct: 364 MPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEG 423
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+YF+ M+ Y I P +HY CMVDLLGRAG ++++ EL+ +P+E WGALL AC
Sbjct: 424 CYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACK 483
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H + ELG++VA L ELEP++ G YVLLSNIYA+ +W +V LR M+E+ + K G
Sbjct: 484 LHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGC 543
Query: 592 SLV 594
S +
Sbjct: 544 SWI 546
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 339/572 (59%), Gaps = 35/572 (6%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQ 117
++ L++ + + + QIH ++ + L ++F +++L++L C+S + + + FD I
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
PD F+ NT+++++L +P ++S +++ + + + Y+ L+ + C ++ G+
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
K+H +++K G DLFV +LI MY+ G+
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGD------------------------------ 155
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
+ AR + D M D+ +N +++ YV VG++ A+ LFD MP RD+VSWN MI G+A
Sbjct: 156 -IEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHAS 214
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
+G+V +A+ FDR C R+++SW+ ++A Y + + E LRLF M + P++ +++SV
Sbjct: 215 LGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSV 274
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
L+AC ++G + +G+ IH I++ RI+ D+ L TSL+ MYAKCG +D + VF+ M ++V
Sbjct: 275 LSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDV 334
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
+W++MIMG HG GE AL+ F +M PND TFI VLSAC+H G+V EGW YF
Sbjct: 335 FAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTS 394
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M ++Y + PK+EHYGC+VD+LGRAG ++++ EL+ +P +W ALL AC + N E
Sbjct: 395 MSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVE 454
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ + +L+ELEP G YVLLSNIY+ +WD+V N+RR+MK ++K GSS +
Sbjct: 455 IAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVD 514
Query: 598 EFASESIV-ENCPPHRKCIVYSMLGEIGAQMK 628
E + + P K I+ ML EI A++K
Sbjct: 515 NAVHEFVAGDQSHPESKKIL-RMLSEITARLK 545
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/470 (43%), Positives = 294/470 (62%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+P + K C G VH +VK GFE D ++ NSLIH+Y+ ++ A+++F
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
D+V+WN+MIDGYVK E+G R +FD M RD+ +WN++I+GY VG ++ A LFD
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFD 121
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
MP R++VSWN M+ G+ K GNV A F M R+VVSWN +LA Y +C E L L
Sbjct: 122 EMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 181
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
FD+M KP EA+++S+L+ACA++G +D G +H+YI RI+ + ++ T+L+ MYAK
Sbjct: 182 FDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAK 241
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG + LA VF+ M K+V++WN++I G +HG ++A ++F EM++ PND TF+ +
Sbjct: 242 CGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAM 301
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
LSAC+HAGMV EG D M Y IEPKVEHY C++DLL RAGL+ ++ EL+ +PME
Sbjct: 302 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEP 361
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
P+ GALL C H N ELG++V + L+ L+P G Y+LLSNIYA+ KWD+ +R
Sbjct: 362 NPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRN 421
Query: 579 IMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+MK + K G S++ + + +Y L EI ++K
Sbjct: 422 LMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLK 471
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 128/312 (41%), Gaps = 52/312 (16%)
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D N+++ + P AL+ + ++M A V+ T L CA + +L +G +
Sbjct: 158 DVVSWNSMLACYAQCGKPNEALALF-DQMRAVGVKPTEATVVSLLSACAHLGALDKGLHL 216
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H I E++ V +L+ MY+ CG++ A +VF D++ WN++I G + V
Sbjct: 217 HTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHV 276
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNC 290
A++LF M E + T+ +M+S G ++ L D M V ++C
Sbjct: 277 KEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDC 336
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+ID A+ G + A M M +PN
Sbjct: 337 VIDLLARAGLLEEAMELIGTMPM----------------------------------EPN 362
Query: 351 EASLMSVLTACANMGVIDIGQWIHSY---IQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
++L ++L C G ++G+ + +Q C +LLS +YA D AR
Sbjct: 363 PSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS----NIYAAAKKWDDARK 418
Query: 408 VFDNMTEKNVVS 419
V N+ + N +S
Sbjct: 419 V-RNLMKVNGIS 429
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/537 (40%), Positives = 329/537 (61%), Gaps = 4/537 (0%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
I L++C + Q+H ++ GL QD F + + T LS++S + F + P
Sbjct: 32 ITTLLKACKKREHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASSVFHRVLAP 91
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ NT++KS N LS + +M A + +T+P + K C+G REGK +
Sbjct: 92 STVLWNTLIKSHCQKNLFSHTLS-AFARMKAHGALPDSFTYPSVIKACSGTCKAREGKSL 150
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +CG + DL+V SLI MY CGE+ DARKVF+ ++V+W +M+ GYV +V
Sbjct: 151 HGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDV 210
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR+LFD MP R++ +WNSM+ G+V +GD+ A G+FD MP ++VVS+ MIDGYAK G
Sbjct: 211 VEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAG 270
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
++ +AR FD ++VV+W+ L++ YV+ + LR+F M + KP+E L+S+++
Sbjct: 271 DMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMELMNVKPDEFILVSLMS 330
Query: 360 ACANMGVIDIGQWIHSYIQKCRI--KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
A A +G +++ QW+ SY+ K I + D +++ +LL M AKCG M+ A +FD ++V
Sbjct: 331 ASAQLGHLELAQWVDSYVSKICIDLQQDHVIA-ALLDMNAKCGNMERALKLFDEKPRRDV 389
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
V + SMI G +HG+GE+A+ +F M G TP++ F +L+AC+ AG+V EG YF
Sbjct: 390 VLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQS 449
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M++ Y I P +HY CMVDLL R+G +RD+ EL+ +P E WGALL AC + +SE
Sbjct: 450 MKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAWGALLGACKLYGDSE 509
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
LG+IVA L ELEP + YVLLS+IYA+ +W +V +R M+E+ + K GSS +
Sbjct: 510 LGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 316/544 (58%), Gaps = 7/544 (1%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L SC + HQI Q++ GL + F A + C+ + + FD I +P+
Sbjct: 19 LRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITT-CSRFKRIHHARKLFDKIPQPNTAT 77
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N + + +L + + E + N +TFP++ K C + +REG++VH
Sbjct: 78 WNAMFRGYLQNGHHRDTVVLFGELNRIAGMP-NCFTFPMIIKSCGKLEGVREGEEVHCCA 136
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
K GF+ + FV SLI MYS G V DA KVF + ++V W ++I+GY+ +V R
Sbjct: 137 TKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGR 196
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
LFD PERD+ W+ +ISGY++ +M AA LFD MP RD +SWN M++GYA G V
Sbjct: 197 RLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEM 256
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACA 362
FD M RNV SWN L+ YV+ + E L F RM + G PN+ +L++VL+AC+
Sbjct: 257 FEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACS 316
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G +D+G+W+H Y + K ++ + L+ MYAKCGV++ A VF+ + K+++SWN+
Sbjct: 317 RLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNT 376
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I G +HG AL MF M+ G P+ TF+ +LSACTH G+V +G+ YF M Y
Sbjct: 377 IINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHY 436
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
I P++EHYGCMVDLLGRAGL+ + + K+P+E +W ALL AC + N E+ ++
Sbjct: 437 SIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELA 496
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASE 602
Q L+ELEP +P +V++SNIY G+ ++V L+ M++ K G S++ ++
Sbjct: 497 LQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIE----CND 552
Query: 603 SIVE 606
S+VE
Sbjct: 553 SVVE 556
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/567 (38%), Positives = 325/567 (57%), Gaps = 44/567 (7%)
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
L + ++ F+ IQEP+ + NT+ + + DP AL Y M++ + N Y
Sbjct: 6 LSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYV-CMISLGLLPNSY 64
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TFP L K CA +++ +EG ++H ++K G+ELDL+V SLI MY + DA KVF+
Sbjct: 65 TFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRS 124
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
D+V++ +++ GY + AR +FD +P +D+ +WN+MISGYV+ G+ + A LF
Sbjct: 125 SHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFK 184
Query: 279 LMP--------------------------FRDVVSW-------------NCMIDGYAKIG 299
M R V SW N +ID Y+K G
Sbjct: 185 EMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCG 244
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ +A F + ++V+SWNIL+ Y Y E L LF M+R PN+ +++S+L
Sbjct: 245 EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILH 304
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDV---LLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
ACA++G IDIG+WIH YI K R+K L TSL+ MY+KCG ++ A VF++M K+
Sbjct: 305 ACAHLGAIDIGRWIHVYIDK-RLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKS 363
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+ +WN+MI G+ MHG+ A ++F M K P+D TF+ +LSAC+HAGM+ G F
Sbjct: 364 LPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFR 423
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M YKI PK+EHYGCM+DLLG +GL +++EE++S + ME +W +LL AC H N
Sbjct: 424 SMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNV 483
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
ELG+ AQ+L ++EP +PG YVLLSNIYA+ G+W+EV +R ++ +K ++K G S +
Sbjct: 484 ELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEI 543
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEI 623
E I+ + R +Y ML E+
Sbjct: 544 DSVVHEFIIGDKFHPRNREIYGMLEEM 570
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 339/578 (58%), Gaps = 41/578 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDG 115
+HP++ LE+C ++ + Q+H Q + GL+ + +RV+ CT + FD
Sbjct: 39 THPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 98
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I EP+ F+ NT+++ + L+ P +S Y E M+ + V+ + YTFP L K +L
Sbjct: 99 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLE-MLRRGVKPDRYTFPFLFKGFTRDIALEY 157
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++H ++K G + ++FV +L+ MY +CG++ AR VF+ P D++TWN +I Y K
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 236 NREVGFARELFDFMPERDIFTW-------------------------------------- 257
+ +R LF M ++ +
Sbjct: 218 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 277
Query: 258 -NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
N+MI Y D G+M++A G+F M RD++SW ++ G+ +G + ARN FD+M ++
Sbjct: 278 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 337
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSW ++ Y+R + E L LF M + KP+E +++SVLTACA++G +++G+WI +Y
Sbjct: 338 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 397
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I + +IK D+ + +L+ MY KCG +D A ++F M++++ +W +MI+G ++G GEKA
Sbjct: 398 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKA 457
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L+MF M K P++ T+I VLSACTH G+V +G YF M + IEP + HYGC+VD
Sbjct: 458 LDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVD 517
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LL RAG ++++ E++ +P++A +WGALL+ C + S++ ++V + ++ELEP +
Sbjct: 518 LLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAV 577
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLL NIYA+ +W+++ LR++M +K ++K G SL+
Sbjct: 578 YVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLI 615
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 339/578 (58%), Gaps = 41/578 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDG 115
+HP++ LE+C ++ + Q+H Q + GL+ + +RV+ CT + FD
Sbjct: 18 THPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 77
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I EP+ F+ NT+++ + L+ P +S Y E M+ + V+ + YTFP L K +L
Sbjct: 78 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLE-MLRRGVKPDRYTFPFLFKGFTRDIALEY 136
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++H ++K G + ++FV +L+ MY +CG++ AR VF+ P D++TWN +I Y K
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 236 NREVGFARELFDFMPERDIFTW-------------------------------------- 257
+ +R LF M ++ +
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 256
Query: 258 -NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
N+MI Y D G+M++A G+F M RD++SW ++ G+ +G + ARN FD+M ++
Sbjct: 257 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 316
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSW ++ Y+R + E L LF M + KP+E +++SVLTACA++G +++G+WI +Y
Sbjct: 317 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 376
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I + +IK D+ + +L+ MY KCG +D A ++F M++++ +W +MI+G ++G GEKA
Sbjct: 377 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKA 436
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L+MF M K P++ T+I VLSACTH G+V +G YF M + IEP + HYGC+VD
Sbjct: 437 LDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVD 496
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LL RAG ++++ E++ +P++A +WGALL+ C + S++ ++V + ++ELEP +
Sbjct: 497 LLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAV 556
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLL NIYA+ +W+++ LR++M +K ++K G SL+
Sbjct: 557 YVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLI 594
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 317/540 (58%), Gaps = 46/540 (8%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
++ F IQEP+ + NT+++ + + +DP AL Y M++ + N YTFP L K CA
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYV-VMISLGLLPNSYTFPFLLKSCA 77
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
++ EG+++H ++K G+E DL+V SLI MY+ G + DA KVF+ D+V++ +
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------- 281
+I GY + + A+E+FD +P +D+ +WN+MISGY + G + A LF M
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 282 -------------------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFD 309
R V SW N +ID Y+K G V +A F+
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
+ ++VVSWN L+ Y Y E L LF M+R PN+ +++S+L ACA++G IDI
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 370 GQWIHSYIQKCRIKPDVL----LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
G+WIH YI K ++K DV L TSL+ MYAKCG ++ A VF++M K++ SWN+MI
Sbjct: 318 GRWIHVYIDK-KLK-DVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
G+ MHG+ ++F M K G P+D TF+ +LSAC+H+G + G F M + Y I
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDIT 435
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
PK+EHYGCM+DLLG +GL ++++E++ +PME +W +LL AC H N EL + A++
Sbjct: 436 PKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARN 495
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
LM++EP +PG YVLLSNIYA+ G+WDEV +R ++ K ++K G S + E IV
Sbjct: 496 LMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIV 555
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/584 (37%), Positives = 341/584 (58%), Gaps = 20/584 (3%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDS-FAASRVLKKLCTSLSSVS--LSVLFFDGIQ 117
L L++C ++K QIH ++ + S D+ S L LC + ++ ++
Sbjct: 26 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 85
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ + N I++ N+ Y++M++K + ++YT P + K CA R++REG+
Sbjct: 86 TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGE 145
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH + +K G D++V N+L+ MY+VC + ARKVF+ P DLV+W +MI GYVK
Sbjct: 146 EVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVK-- 203
Query: 238 EVGFARE----LFDFMPER---DIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DV 285
+GFARE F+ E D T ++S +GD+ L + DV
Sbjct: 204 -MGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDV 262
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
N ++D Y K G+ AR F M ++NVVSWN +++ + + E L +F +M R
Sbjct: 263 FVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL 322
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
KP++ +L++VL +CAN+GV+++G+W+H+Y+ + +I+ D + +L+ MYAKCG +D A
Sbjct: 323 GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQA 382
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
VF M K+V S+ +MI+G MHGQG KAL++F EM K G P++ TF+ VL+AC+H
Sbjct: 383 CWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHV 442
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V EG YF+ M IY + P++EHYGCMVDLLGRAGL+ ++EE + +P+E + GA
Sbjct: 443 GLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGA 502
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL AC H ELG+ V + + ++EPR G YVL+SNIY+S +W + LR+ MKE+ L
Sbjct: 503 LLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNL 562
Query: 586 EKAVG-SSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
EK G SS+ G + P K I Y +L EI + +K
Sbjct: 563 EKTPGCSSIELDGVIHEFQKGDKSHPKIKEI-YKLLDEIMSHLK 605
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 200/420 (47%), Gaps = 23/420 (5%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLS 104
DN +P V L+ V+E ++H Q + GL+ D + ++ +++ +C +
Sbjct: 124 DNYTIPFV------LKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIR 177
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
S FD + D T+++ ++ + + ++E M + ++ + T ++
Sbjct: 178 SAR---KVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFE-MCGENLQADGMTLVIVL 233
Query: 165 KVCAGIRSLREGKKVHARIVK-CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
CA + LR G+K+H I++ LD+FV N+L+ MY CG+ ARKVF++ PV ++
Sbjct: 234 SSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNV 293
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAA---NGL 276
V+WNSMI G + + + +F M + D T ++++ ++G +E +
Sbjct: 294 VSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAY 353
Query: 277 FDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
D R D N ++D YAK G++ A F M ++V S+ ++ +
Sbjct: 354 LDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKA 413
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLT 394
L LF M + +P+E + + VLTAC+++G+++ G ++ ++P + ++
Sbjct: 414 LDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVD 473
Query: 395 MYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
+ + G+++ A NM E + +++ +HG+ E + ++EK P + A
Sbjct: 474 LLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGA 533
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 335/569 (58%), Gaps = 10/569 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQE 118
L L CS + +QIH Q+L + L QD F A +++ LC L+S +V F+ +
Sbjct: 25 LCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLAS---AVNVFNHVPH 81
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ + N+I+++ N +L F + +M + +++T+P L K C G SL +
Sbjct: 82 PNVHLYNSIIRAHAH-NTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVR 140
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEV-LD-ARKVFEDGPVWDLVTWNSMIDGYVK 235
+HA + K GF D+FV NSLI YS CG LD A +F D+VTWNSMI G V+
Sbjct: 141 MIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVR 200
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
E+ A +LFD MPERD+ +WN+M+ GY G+M+ A LF+ MP R++VSW+ M+ GY
Sbjct: 201 CGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGY 260
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
+K G++ AR FDR +NVV W ++A Y E L+ +M +P++ L+
Sbjct: 261 SKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLI 320
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TE 414
S+L ACA G++ +G+ IH+ +++ R + + + + MYAKCG +D A +VF M +
Sbjct: 321 SILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAK 380
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
K+VVSWNSMI G+ MHG GEKALE+F M G P+ TF+ +L ACTHAG+V EG Y
Sbjct: 381 KDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKY 440
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M+++Y I P+VEHYGCM+DLLGR G ++++ L+ +PME + G LL+AC H+
Sbjct: 441 FYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHN 500
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ + + V + L ++EP DPG Y LLSNIYA G W V N+R M +K G+S +
Sbjct: 501 DVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSI 560
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEI 623
E E V + + +Y M+ +
Sbjct: 561 EVEEEVHEFTVFDQSHPKSDDIYKMIDRL 589
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/549 (38%), Positives = 325/549 (59%), Gaps = 44/549 (8%)
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
L +S ++ F+ IQEP+ + NT+ + + +D AL Y M++ + N Y
Sbjct: 8 LSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYV-CMISLGLLPNSY 66
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
+FP L K CA ++L EG+++H ++K G++LD++V SLI MY+ G + DA KVF+
Sbjct: 67 SFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRS 126
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF- 277
+V++ ++I GY + AR+LFD + +D+ +WN+MISGYV+ + + A L+
Sbjct: 127 SHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYK 186
Query: 278 DLMPF-------------------------RDVVSW-------------NCMIDGYAKIG 299
D+M R + SW N +ID Y+K G
Sbjct: 187 DMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCG 246
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V +A F + ++V+SWN L+ + Y E L LF M+R PN+ +++SVL
Sbjct: 247 EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 306
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLS---TSLLTMYAKCGVMDLARNVFDNMTEKN 416
ACA++G IDIG+WIH YI K R+K S TSL+ MYAKCG ++ A+ VFD+M ++
Sbjct: 307 ACAHLGAIDIGRWIHVYINK-RLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRS 365
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+ SWN+MI G+ MHG+ A ++F +M K G P+D TF+ +LSAC+H+GM+ G F
Sbjct: 366 LSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR 425
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M + YKI PK+EHYGCM+DLLG GL ++++E++ +PME +W +LL AC H+N
Sbjct: 426 SMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNV 485
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
ELG+ AQ+L+++EP +PG YVLLSNIYA+ G+WD+V +R ++ +K ++KA G S +
Sbjct: 486 ELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEI 545
Query: 597 GEFASESIV 605
E I+
Sbjct: 546 DSVVHEFII 554
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/614 (36%), Positives = 339/614 (55%), Gaps = 49/614 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS---SVSLSVLFF 113
+HP L L C + QIH+ ++ SGL FA S++++ S S S +LS+
Sbjct: 25 NHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHS 84
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
Q P+ F+ NT++++ + P +L + +M+ + N +TFP L K CA ++
Sbjct: 85 IHHQPPNIFIWNTLIRAHSLTPTPTSSLHLF-SQMLHSGLYPNSHTFPSLFKSCAKSKAT 143
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
E K++HA +K L V SLIHMYS GE+ AR VF+ + D V++ ++I GY
Sbjct: 144 HEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGY 203
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV------- 286
V V AR LFD +P +D+ +WN+MI+GYV G E A F M DV
Sbjct: 204 VSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMV 263
Query: 287 -------------------SW-------------NCMIDGYAKIGNVTSARNCFDRMCMR 314
SW N ++D Y+K G + +AR FD M +
Sbjct: 264 SVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK 323
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+V+ WN ++ Y Y E L LF+ M+R + PN+ + ++VL ACA++G +D+G+W+H
Sbjct: 324 DVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVH 383
Query: 375 SYIQKCRIKP-----DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
+YI K +K +V L TS++ MYAKCG +++A VF +M +++ SWN+MI G M
Sbjct: 384 AYIDK-NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAM 442
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
+G E+AL +F EM G P+D TF+ VLSACT AG V G YF M + Y I PK++
Sbjct: 443 NGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQ 502
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HYGCM+DLL R+G +++ L+ + ME A+WG+LL+AC H E G+ VA+ L EL
Sbjct: 503 HYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFEL 562
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCP 609
EP + G YVLLSNIYA G+WD+V +R + +K ++K G + + E +V +
Sbjct: 563 EPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKF 622
Query: 610 PHRKCIVYSMLGEI 623
+ ++ ML E+
Sbjct: 623 HPQSENIFRMLDEV 636
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/536 (38%), Positives = 334/536 (62%), Gaps = 4/536 (0%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDGIQEPDAF 122
L++C T +E +Q+H + + +SR+L ++++ + FD IQEP
Sbjct: 22 LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N ++K ++ A++ + K++ FV + +T P + K CA + +L+EGK++H
Sbjct: 82 SWNLLIKCYIENQRSNDAIALFC-KLLCDFVP-DSFTLPCVLKGCARLGALQEGKQIHGL 139
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
++K GF +D FV +SL+ MYS CGE+ RKVF+ D+V+WNS+IDGY + E+ A
Sbjct: 140 VLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
E+F+ MPE+D F+W +I G G +EAA +FD MP R+ VSWN MI+GY K G+
Sbjct: 200 LEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSN 259
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+A+ FD+M R++V+WN ++ Y R K + + L+LF+ M+R D PN +++ ++A +
Sbjct: 260 TAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAAS 319
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
M + G+W+HSYI K K D +L T L+ MY+KCG + A VF ++ +K + W S
Sbjct: 320 GMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTS 379
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I+G GMHG E+ LE+F EM + G P+ TFI VL+AC+HAG + YF +M Y
Sbjct: 380 VIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDY 439
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
I+P +EHYGC++D+L RAG + ++++ + ++P++A +W +LLS H N +G+
Sbjct: 440 GIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYA 499
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPG 597
AQHL++L P G YV+LSN+YA+ G W++V +R +MK+K ++K G SS+ H G
Sbjct: 500 AQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQG 555
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 349/611 (57%), Gaps = 43/611 (7%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDGIQ 117
P L +++C ++ + QIH+Q + +GL + ++++ C L + + + FD +
Sbjct: 21 PPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ F+ N ++K + + P A+S Y E M+ + V + YT+P L K +++ G+
Sbjct: 81 GPNHFVWNNMIKGYSRVGCPNSAVSMYCE-MLERGVMPDEYTYPFLLKRFTRDTAVKCGR 139
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H IVK GF ++FV+N+LIH+YS+ GEV AR VF+ D+VTWN MI GY +++
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSK 199
Query: 238 EVGFARELFDFMPERDIFTW---------------------------------------N 258
+ + +LFD M + N
Sbjct: 200 QFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLEN 259
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
++I Y GDM+ A G+FD M RDV+SW ++ G+ +G V ARN FD+M R+ VS
Sbjct: 260 ALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVS 319
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W ++ Y++ + E L LF M + KP+E +++S+LTACA++G +++G+WI +YI
Sbjct: 320 WTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYID 379
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K IK D + +L+ MY CG ++ A +F+ M ++ +SW ++I G ++G GE+AL+
Sbjct: 380 KNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALD 439
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
MF +M K TP++ T I VL ACTH+GMV +G +F M + IEP V HYGCMVDLL
Sbjct: 440 MFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLL 499
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
GRAG ++++ E++ +P++ +WG+LL AC H + E+ ++ AQ ++ELEP + YV
Sbjct: 500 GRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYV 559
Query: 559 LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVY 617
LL NIYA+ +W+++ +R++M ++ ++K G SL+ E + + P K I Y
Sbjct: 560 LLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEI-Y 618
Query: 618 SMLGEIGAQMK 628
S L E+ +K
Sbjct: 619 SKLDEMSVDLK 629
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 334/553 (60%), Gaps = 5/553 (0%)
Query: 43 FTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS 102
F T N + + S L KL C T + HQ+H L+ GL QDSF ++ + S
Sbjct: 17 FAKTTNPKSNVSLYSISALLKL--CKTHIDLHQVHAHLIQKGLEQDSFLVTQFISA-SNS 73
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
++ +S S FD + P F+ N+++ + +S Y +M + + YTFP
Sbjct: 74 VAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLYV-RMKREDGAPDRYTFPS 132
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L KVCA + EG +H I++CG + D++V SL+++Y G + ARKVF+ +
Sbjct: 133 LLKVCASEGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERN 192
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
+V+W +MI GY + A+ LFD MPER++ +WN++I GY+ +GD+++A FD MP
Sbjct: 193 VVSWTAMIVGYSSIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPE 252
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
++VVS+ MIDGYAK G++ SARN F + R++++W+ L++ Y + E ++ F M
Sbjct: 253 KNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEM 312
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGV 401
+ KP++ L S++ AC+ +G +D+ +W+ SY +C + ++ +L+ M AKCG
Sbjct: 313 SSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGN 372
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
M+ A +F+ M +++++S+ S++ G +HG G++A+ +F M TP+D F +L+A
Sbjct: 373 MERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTA 432
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C+ AG+V EGW YF++M+ Y + P V+HY C+VDLL R+G ++++ EL+ +P+++
Sbjct: 433 CSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAG 492
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
WGALL AC + +SEL ++VA L+E+EP + G YVLLSNIYA+ +W +V +R M
Sbjct: 493 AWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMN 552
Query: 582 EKELEKAVGSSLV 594
E+ L K G S +
Sbjct: 553 ERGLRKIPGCSWI 565
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/613 (37%), Positives = 349/613 (56%), Gaps = 45/613 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFF- 113
+HP L L T+ + +QIH++L+ +G + +R++ +S V + F
Sbjct: 14 THPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFM 73
Query: 114 ------DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
++ + F+ N I+KSF DP A + M+ V + ++F L+ K C
Sbjct: 74 SRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIF-NLMLENGVCVDKFSFSLVLKAC 132
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
+ + ++EG ++H + + D+F++N L+ +Y CG + AR++F+ D V++N
Sbjct: 133 SRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFN 192
Query: 228 SMIDGYVKNREVGFARELFDFMP----------------------------------ERD 253
SMIDGYVK+ V ARELFD MP +RD
Sbjct: 193 SMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRD 252
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+ +WNSMI G V G ME A+ LF+ MP RDVVSW M+DGYAK+G + AR FD M
Sbjct: 253 LISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPE 312
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQW 372
R+V+S N ++A YV+ E L F M+ R + P+ A+L+ L+A A +G D G
Sbjct: 313 RDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVA 372
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H YI+ L +L+ MYAKCG +D A +VF+++ +K++ WN++I G +HG
Sbjct: 373 LHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGL 432
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
GE A E+FMEMEK P+D TFI VL+AC HAG+V EG F+LM+R++K+EPK++HYG
Sbjct: 433 GEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYG 492
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVD+LGRAG + ++++ V K+P+E +W LLSAC H N +G+ VA+HL+ ++
Sbjct: 493 CMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSY 552
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+P YVLLSNIYA G W++V +R +MK+++L+K G S + E V + +
Sbjct: 553 NPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 612
Query: 613 KCIVYSMLGEIGA 625
+YSML + A
Sbjct: 613 VREIYSMLDSLSA 625
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/593 (37%), Positives = 334/593 (56%), Gaps = 49/593 (8%)
Query: 77 HTQLLVSGLSQDSFAASRVLKKLCT---SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
H Q++ +GL ++A S++L+ LC + +V F+ QEP+ + NT+++
Sbjct: 2 HAQMVKTGLHNTNYALSKLLE-LCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+D L Y +M++ N YTFP L K CA ++ EG+++HA+++K G ELD +
Sbjct: 61 SSDLVSPLEMYV-RMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRY 119
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
SLI MY+ G + DARKVF+ D+V+ ++I GY +V AR++FD + ERD
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD 179
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDV-------VSW------------------ 288
+ +WN+MI+GYV+ E A LF M +V VS
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239
Query: 289 ---------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
N I Y+K G+V A F+ + ++VVSWN L+ Y Y
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP---DVLLST 390
E L LF M+R PN+ +++SVL ACA++G IDIG+WIH YI K R+K L T
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK-RLKGVTNGSALRT 358
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
SL+ MYAKCG ++ A VF++M K++ SWN+MI G+ MHG+ A ++F M K G P
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+D T + +LSAC+H+G++ G F + + Y I PK+EHYGCM+DLLG AGL +++EE+
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEI 478
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ +PME +W +LL AC H N EL + AQ LME+EP + G YVLLSNIYA+ G+W
Sbjct: 479 IHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRW 538
Query: 571 DEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
++V +R ++ K ++K G S + E I+ + + +Y ML E+
Sbjct: 539 EDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEM 591
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 344/569 (60%), Gaps = 6/569 (1%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDGIQEPD 120
Q++ C+ +E Q+H L + + F +SR+L ++ + + FD IQ
Sbjct: 19 QRMGLCAP-QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRS 77
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
NTI+K ++ + ++E ++ +++ N +T P + K CA + ++EGK++H
Sbjct: 78 LIHWNTIIKCYVENQFSHDGIVLFHE-LVHEYLPDN-FTLPCVIKGCARLGVVQEGKQIH 135
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+K GF D+FV+ SL++MYS CGE+ ARKVF+ D+V WNS+IDGY + E+
Sbjct: 136 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEID 195
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
A +LF+ MPERD F+W ++ G G +E+A LFD MP R++VSWN MI+GY K G+
Sbjct: 196 IALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGD 255
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
SA F +M + ++V+WN+++A Y + + +++F M++ ++P+ A+L+SVL+A
Sbjct: 256 FDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 315
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
+ + V+ G+WIHSY++K + D +L TSL+ MYAKCG ++ A VF + +K V W
Sbjct: 316 VSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 375
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
++I+G G+HG AL +F+EM K G PN FI VL+AC HAG+V +G YFD+M
Sbjct: 376 TAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMN 435
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
YKIEP +EHYGC+VD+L RAG + +++ + +P+ +W +LL H ++G+
Sbjct: 436 EYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGE 495
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGEF 599
AQ ++E+ P G Y+LLSN+YA+ G W++V ++R +M ++ K G SS+ H G
Sbjct: 496 YAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTL 555
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ + P K I Y+ + E+ ++K
Sbjct: 556 HEFIVGDISHPQTKEI-YAKMSEMKEKLK 583
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/544 (41%), Positives = 328/544 (60%), Gaps = 12/544 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV------LFF 113
+L +L +CS+ Q H LL SG S A L L + +S S S +F
Sbjct: 13 LLSRLRACSSASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAADHADSVFA 72
Query: 114 DGIQEPD--AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
+E AF NT+++ P +L Y+ +M V + YTFP + K C
Sbjct: 73 HLAEEASRHAFPWNTLVR-LHAAASPRRSL-LYFSRMRRAAVAPDAYTFPAVLKACGCAP 130
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
R G VH V+ G + DLF RN+LI Y G+ RKVF+ G V DLV+WNSM+
Sbjct: 131 GCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHG-VRDLVSWNSMVA 189
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV-GDMEAANGLFDLMPFRDVVSWNC 290
GYV EV A++LFD M +RD F+W +MI GY ++ G ++ A LFD MP RD+V WN
Sbjct: 190 GYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNS 249
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MIDGYA+ G + AR F+ M RNV+SW+I++ YVR + E L F RM+R KP+
Sbjct: 250 MIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPD 309
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + + ACA +G ++ G+W+HSY++K ++ DV++ T+L+ MY KCG +DLA+ +F+
Sbjct: 310 RVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFE 369
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+M +K+VV+WN MI+G G HG G A+++F +ME +D + + VL++CTHAG+V E
Sbjct: 370 SMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSE 429
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F M++ +EPKVEHYG ++DLLGRAG + + + +PME P LWG+LL++C
Sbjct: 430 GLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASC 489
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+H EL ++ + L L D G YVLLSNIYA EG WD+V +R++M + ++K +G
Sbjct: 490 RSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIG 549
Query: 591 SSLV 594
S++
Sbjct: 550 RSVI 553
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 334/566 (59%), Gaps = 35/566 (6%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+LQ + ++ + +H ++ + + L + L S+ + FD +
Sbjct: 70 LLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK 129
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ ++ ++ AL F+YE M ++ NH+TF + C + L E
Sbjct: 130 NVVSWTAMIAAYARHEHGQEALGFFYE-MQDVGIQPNHFTFASILPACTDLEVLGE---F 185
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN--- 236
H IVK GFE ++FV N L+ MY+ G + AR++F+ P D+V+WN+MI GYV+N
Sbjct: 186 HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLI 245
Query: 237 ------------REV--------GFAR--------ELFDFMPERDIFTWNSMISGYVDVG 268
R+V G+A+ ELF+ MPE+++ +WN+MI+GYV G
Sbjct: 246 EDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNG 305
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
++ A LF +MP R+V+SWN +I G+A+ G V A F M NVVSWN ++A Y +
Sbjct: 306 SVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQ 365
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
L+LF +M D KPN + VL ACA + V++ G H + + + DVL+
Sbjct: 366 NGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLV 425
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+L+ MYAKCG ++ AR VFD M +++ S ++MI+GY ++G +++LE+F +M+ G
Sbjct: 426 GNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGL 485
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P+ TF+ VLSAC HAG+V EG YFD+M R Y I P +EHYGCM+DLLGRAG ++
Sbjct: 486 KPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEAN 545
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+L++K+P++ +WG+LLSAC TH+N +LG+ VAQHL+ L P++P PYVLLSNIYA+ G
Sbjct: 546 DLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAG 605
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLV 594
+WD++ ++R MK+++++K +G S +
Sbjct: 606 RWDDIGSVRNRMKDRKVKKKLGCSWI 631
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSL 392
E L + M+ P+ ++ S+L C N + + +H+++ + + + D+ L L
Sbjct: 47 EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+++Y K G + AR VFD M KNVVSW +MI Y H G++AL F EM+ G PN
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNH 166
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF +L ACT ++ G ++ ++++ + E V +VD+ + G + + EL
Sbjct: 167 FTFASILPACTDLEVL--GEFHDEIVKGGF--ESNVFVGNGLVDMYAKRGCIEFARELFD 222
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
K+P + W A+++ + + L + + E+ RD + + YA G +
Sbjct: 223 KMP-QRDVVSWNAMIAG---YVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVEN 278
Query: 573 VENLRRIMKEKEL 585
L M E+ L
Sbjct: 279 AVELFEKMPEQNL 291
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/611 (37%), Positives = 350/611 (57%), Gaps = 51/611 (8%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV---LFF-- 113
P L L+ C + + +QIH +LL +G +++F ++++ TSL + + +FF
Sbjct: 17 PTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRH 76
Query: 114 --------DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
+ +E D F+ N I+K++ +DP A+ + M+ + +T L+ K
Sbjct: 77 HAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAM-WLVSLMLENGAFADKFTLSLVLK 135
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C+ + ++EG ++H + K F DLF++N LI Y CG ++ A +VF+ P D V+
Sbjct: 136 ACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVS 195
Query: 226 WNSMIDGYVKNREVGFARELFDF----------------------------------MPE 251
+NSMIDGYVK + AR +FD MPE
Sbjct: 196 YNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPE 255
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
RD+ +WNSMI G V G ME A GLFD MP RD+VSW MIDGYAK G V AR+ FD M
Sbjct: 256 RDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEM 315
Query: 312 CMRNVVSWNILLALYVRCKDYC-ECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDI 369
R+VV++N ++ YV+ YC E L +F M G+ + A+L+ L+A A +G ID
Sbjct: 316 PERDVVAYNAMMGGYVQ-NGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDK 374
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G IH +I++ D L +L+ MY+KCG ++ A VF+N+ EK+V WN++I G +
Sbjct: 375 GVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAI 434
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HG GE A + MEME+ P+D TFI +L+AC HAG+V EG F+LM+R++K+EPK++
Sbjct: 435 HGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQ 494
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HYGCMVD+LGRAG + +++ V ++P E +W +LLSAC TH + +G+ VA++LM L
Sbjct: 495 HYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRL 554
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCP 609
+ P YVL SN+YA GKW++V +R +MK+K L+K G S + V++
Sbjct: 555 DSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKS 614
Query: 610 PHRKCIVYSML 620
+ +YS+L
Sbjct: 615 HPQFSGIYSIL 625
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 324/565 (57%), Gaps = 46/565 (8%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
++ F+ IQEP+ + NT+++ +DP AL Y +M++ N Y+FP L K CA
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYV-RMVSLGHLPNSYSFPFLLKSCA 75
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
++ EG+++HA+++K G LD +V SLI MY+ G + DARKVF+ D+V+ +
Sbjct: 76 KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF------ 282
+I GY + AR++FD + ERD+ +WN+MI+GYV+ G E A LF M
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195
Query: 283 --------------------RDVVSW-----------------NCMIDGYAKIGNVTSAR 305
R V SW N +ID Y+K G+V +A
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
F+ + ++VVSWN L+ Y Y E L LF M+R PN+ +L+SVL ACA++G
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315
Query: 366 VIDIGQWIHSYIQKC--RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
IDIG+WIH YI K + + L TSL+ MYAKCG ++ A VF++M +++ SWN+M
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G+ MHG+ A ++F M P+D TF+ +LSAC+H+G++ G F M + Y
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYN 435
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+ PK+EHYGCM+DLLG +GL +++EE++ +PME +W +LL AC H N EL + A
Sbjct: 436 LTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFA 495
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
Q L+++EP + G YVLLSNIYA+ G+W++V +R ++ K ++K G S + E
Sbjct: 496 QKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEF 555
Query: 604 IVENCPPHRKCIVYSMLGEIGAQMK 628
I+ + R+ +Y ML E+ Q++
Sbjct: 556 IIGDKLHPRRREIYHMLEEMDVQLE 580
>gi|125573086|gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
Length = 616
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/544 (41%), Positives = 328/544 (60%), Gaps = 12/544 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV------LFF 113
+L +L +CS+ Q H LL SG S A L L + +S S S +F
Sbjct: 13 LLSRLRACSSASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAADHADSVFA 72
Query: 114 DGIQEPD--AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
+E AF NT+++ P +L Y+ +M V + YTFP + K C
Sbjct: 73 HLAEEASRHAFPWNTLVR-LHAAASPRRSL-LYFSRMRRAAVAPDAYTFPAVLKACGCAP 130
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
R G VH V+ G + DLF RN+LI Y G+ RKVF+ G V DLV+WNSM+
Sbjct: 131 GCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHG-VRDLVSWNSMVA 189
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV-GDMEAANGLFDLMPFRDVVSWNC 290
GYV EV A++LFD M +RD F+W +MI GY ++ G ++ A LFD MP RD+V WN
Sbjct: 190 GYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNS 249
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MIDGYA+ G + AR F+ M RNV+SW+I++ YVR + E L F RM+R KP+
Sbjct: 250 MIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPD 309
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + + ACA +G ++ G+W+HSY++K ++ DV++ T+L+ MY KCG +DLA+ +F+
Sbjct: 310 RVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFE 369
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+M +K+VV+WN MI+G G HG G A+++F +ME +D + + VL++CTHAG+V E
Sbjct: 370 SMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSE 429
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F M++ +EPKVEHYG ++DLLGRAG + + + +PME P LWG+LL++C
Sbjct: 430 GLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASC 489
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+H EL ++ + L L D G YVLLSNIYA EG WD+V +R++M + ++K +G
Sbjct: 490 RSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIG 549
Query: 591 SSLV 594
S++
Sbjct: 550 RSVI 553
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 333/567 (58%), Gaps = 5/567 (0%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+ L C+ QIH QL+ L QD + A +++ + +++S +V F+ + +P+
Sbjct: 26 ITDLHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLT-NNLSSAVNVFNQVPDPN 84
Query: 121 AFMCNTIMKSFLMLNDPFGALSFY--YEKMMAKFVEHNHYTFPLLGKVCAGIRS-LREGK 177
+ N +++++ + + +L + KM V +++T+P L K C G S L K
Sbjct: 85 VHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVK 144
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
VHA + K GF D+FV NSLI Y CG+V A KVF D+V+WNSM+ G VKN
Sbjct: 145 MVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNG 204
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
++ A ++FD MPERD +WN+M+ G+ G+M+ A LF+ M RD+VSW+ M+ GY+K
Sbjct: 205 DLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSK 264
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G++ AR FDR ++N+V W +++ Y E + L D M + + ++ +S+
Sbjct: 265 NGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISI 324
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKN 416
L ACA G++ +G+ +H + R + + S + MYAKCG +D A VF+ M TEK+
Sbjct: 325 LAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKD 384
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+VSWNSMI G+G+HG GEK++E+F M + G P+ TFI +L ACTHAG+V EG YF
Sbjct: 385 LVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFY 444
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
MQR+Y I P++EHYGCMVDLLGR G ++++ LV +P E + G LL AC H++
Sbjct: 445 SMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDV 504
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
+L V+++L +L P DPG + LLSNIYA G W V +R+ M ++ +K G S +
Sbjct: 505 KLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEV 564
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEI 623
E E V + + +Y+M+ +
Sbjct: 565 EEEVHEFTVRDWSHPKSGDIYNMIDRL 591
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/597 (36%), Positives = 339/597 (56%), Gaps = 49/597 (8%)
Query: 40 KPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL 99
KPK+ N V +++P L +ESCST+++ QI ++ ++G+ +F SRV+
Sbjct: 145 KPKWNSPTN-----VIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIA-F 198
Query: 100 CTSLSSVSLSV--LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
C S L F+ +++P+ FM NT+++ + P A SF+ M VE +
Sbjct: 199 CALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFV-YMFQLRVEMDS 257
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
+F K C ++ EG+ V+ + K GF+ +L VRN LIH Y+ G + +AR+VF++
Sbjct: 258 RSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDE 317
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEA- 272
D+VTW +MIDGY + A E+F+ M E + T +++S D+G++E
Sbjct: 318 SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMG 377
Query: 273 ----------------------------------ANGLFDLMPFRDVVSWNCMIDGYAKI 298
A LFD M +DV SW M++GYAK
Sbjct: 378 KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKC 437
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G++ SAR FD+ +N V W+ ++A Y + E L+LF M+ P E +L+SVL
Sbjct: 438 GDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVL 497
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKP-DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+AC + +++G WIH Y +I P V L +++ MYAKCG +D A VF M E+N+
Sbjct: 498 SACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNL 557
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
+SWN+MI GY +G+ ++A+ +F +M G PN+ TF+ +L+AC+H G++ EG YFD
Sbjct: 558 ISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDN 617
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M+R Y I+P+ HY CMVDLLGR GL+ ++ +L++ +PM+ A WGALL+AC H N E
Sbjct: 618 MERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVE 677
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L ++ A +L+ L+P D G YVLL+N A++ KW +V +R +MK+K ++K G SL+
Sbjct: 678 LARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLI 734
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/610 (35%), Positives = 343/610 (56%), Gaps = 46/610 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC-TSLSSVSLSVLFFDGIQEPDAF 122
+ C++ K+ QIH Q+L + D +AAS + +S S++ + FD I +P+ +
Sbjct: 146 FQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLY 205
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N ++++ +DP ++ + + N +TFP+L K A R GK VH
Sbjct: 206 SWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGM 265
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE--DGPVWDLVTWNSMIDGYV------ 234
+K F D+FV NSLIH Y+ CG + A VFE +G D+V+WNSM+ G+V
Sbjct: 266 AIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPD 325
Query: 235 -----------------------------KNREVGFARELFDFMPERDIF----TWNSMI 261
K + R++ D++ ++ N+ I
Sbjct: 326 KALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATI 385
Query: 262 SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+V G++E A GLFD M RDVVSW +IDGYAK+ AR+ FD M +++ +WN+
Sbjct: 386 DMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNV 445
Query: 322 LLALYVRCKDYCECLRLFD--RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
L++ Y + E L +F ++ + A+P++ +L+S L+ACA +G +DIG+WIH YI+K
Sbjct: 446 LISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKK 505
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
RI+ + L+TSL+ MY+K G ++ A VF ++ K+V W++MI G MHG+GE A+E+
Sbjct: 506 ERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIEL 565
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
F++M++ PN TF +L AC+H+G+V EG FD M+R+Y + PK +HY CMVD+LG
Sbjct: 566 FLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLG 625
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
RAG + ++ + + +P+ ++WGALL AC H N EL + L+E+EP + G YVL
Sbjct: 626 RAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVL 685
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYS 618
LSN+YA G W+ V LR+ M++ L+K G S + E IV +N P + I Y+
Sbjct: 686 LSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDI-YA 744
Query: 619 MLGEIGAQMK 628
L EI A+++
Sbjct: 745 KLDEIMARLR 754
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/615 (34%), Positives = 338/615 (54%), Gaps = 40/615 (6%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFD 114
LS+P+L LE+C + + QI Q++++GL D FA+SR++ S S ++ + +
Sbjct: 52 LSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILN 111
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+Q P+ F N +++ + +P L Y + ++YT+ L KVCA +
Sbjct: 112 NLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSY 171
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G ++ +++K GF+ D+++ N +IHM GE A KVF++G V DLV+WNS+I+GYV
Sbjct: 172 MGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYV 231
Query: 235 KNRE-----------------------------------VGFARELFDFMPER----DIF 255
+ R+ + RE+ ++ E I
Sbjct: 232 RRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKIS 291
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
N+++ YV GD+EA LFD M + VVSW MI GYAK G + A F M +N
Sbjct: 292 LVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKN 351
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+WN ++ V+ E L LF M + KP++ +++ L+AC+ +G +D G W H+
Sbjct: 352 VVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHN 411
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
YI+K + DV L T+L+ MYAKCG M A VF+ M +N ++W ++I G ++G
Sbjct: 412 YIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVND 471
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ F +M G P++ TF+ VL+AC H G+V EG YFD M+ + + P+ +HY CMV
Sbjct: 472 AIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMV 531
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
+LLGRAGL+ ++EEL+ +PMEA +WGAL AC H N +G+ A L++L+P D G
Sbjct: 532 NLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSG 591
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
YVLL+N+Y GKW+E +N+R++M E+ +EK GSS + +E IV + +
Sbjct: 592 IYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQ 651
Query: 616 VYSMLGEIGAQMKMC 630
+Y I + +C
Sbjct: 652 IYECFNLINKTIGVC 666
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/535 (38%), Positives = 317/535 (59%), Gaps = 44/535 (8%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ IQEP+ + NT+++ + +DP +L+ Y M++ + N YTFP L K CA ++
Sbjct: 21 FETIQEPNQLIWNTMIRGHALSSDPVSSLTLYV-CMVSLGLLPNSYTFPFLLKSCAKSKT 79
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
EG+++H +++K GF+LDL+V SLI MY + DA KVF+ D+V++ ++I G
Sbjct: 80 FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----------- 281
Y ++ A++LFD +P +D+ +WN+MISGY + G + A LF+ M
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199
Query: 282 ---------------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCM 313
R V SW N +ID Y+K G V +A F +
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
++V+SWN L+ Y Y E L LF M+R PN+ +++SVL ACA++G IDIG+WI
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWI 319
Query: 374 HSYIQKCRIKPDV---LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
H YI K R+K L TSL+ MYAKCG ++ A VF++M K++ SWN+MI G+ MH
Sbjct: 320 HVYIDK-RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMH 378
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+ + + ++F M K G P+D TF+ +LSAC+H+GM+ G F M + YK+ PK+EH
Sbjct: 379 GRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEH 438
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCM+DLLG +GL +++EE+++ + ME +W +LL AC H N EL + AQ+L+++E
Sbjct: 439 YGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIE 498
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
P +P Y+LLSNIYAS G+W++V +R ++ K ++K G S + E +V
Sbjct: 499 PENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVV 553
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A + F+ + N + WN ++ + D L L+ M+ PN + +L +CA
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
GQ IH + K D+ + TSL++MY + ++ A VFD + ++VVS+ ++
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 424 IMGYGMHGQ-------------------------------GEKALEMFMEMEKRGPTPND 452
I GY G ++ALE+F EM K P++
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 453 ATFICVLSACTHAGMVLEG 471
+T++ VLSAC H+G + G
Sbjct: 197 STYVTVLSACAHSGSIELG 215
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 327/544 (60%), Gaps = 12/544 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV------LFF 113
+L +L +CS+ Q H LL SG S A L L + +S S S +F
Sbjct: 13 LLSRLRACSSASHALQCHALLLTSGHLAASPARLSNLLLLALASASASPSAADHADSVFA 72
Query: 114 DGIQEPD--AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
+E AF NT+++ P +L Y+ +M V + YTFP + K C
Sbjct: 73 HLAEEASRHAFPWNTLVR-LHAAASPRRSL-LYFSRMRRVAVAPDAYTFPAVLKACGCAP 130
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
R G VH V+ G + DLF RN+LI Y G+ RKVF+ G V DLV+WNSM+
Sbjct: 131 GCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHG-VRDLVSWNSMVA 189
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV-GDMEAANGLFDLMPFRDVVSWNC 290
GYV EV A++LFD M +RD F+W +MI GY ++ G ++ A LFD MP RD+V WN
Sbjct: 190 GYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNS 249
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MIDGYA+ G + AR F+ M RNV+SW+I++ YVR + E L F RM+ KP+
Sbjct: 250 MIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLSCGIKPD 309
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + + ACA +G ++ G+W+HSY++K ++ DV++ T+L+ MY KCG +DLA+ +F+
Sbjct: 310 RVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFE 369
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+M +K+VV+WN MI+G G HG G A+++F +ME +D + + VL++CTHAG+V E
Sbjct: 370 SMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCTHAGLVSE 429
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F M++ +EPKVEHYG ++DLLGRAG + + + +PME P LWG+LL++C
Sbjct: 430 GLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASC 489
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+H EL ++ + L L D G YVLLSNIYA EG WD+V +R++M + ++K +G
Sbjct: 490 RSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIG 549
Query: 591 SSLV 594
S++
Sbjct: 550 RSVI 553
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/547 (37%), Positives = 323/547 (59%), Gaps = 49/547 (8%)
Query: 90 FAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEK 147
+A S++L+ L + ++ F+ I EP+ + N + + + +DP AL Y
Sbjct: 7 YAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYV-V 65
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M++ + N +TFP L K CA ++ +EG+++H ++K GF+LDL+V SLI MY+ G
Sbjct: 66 MISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGR 125
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
+ DA+KVF+ D+V++ ++I GY + A+++FD +P +D+ +WN+MISGY +
Sbjct: 126 LEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAET 185
Query: 268 GDMEAANGLFDLMP--------------------------FRDVVSW------------- 288
G+ + A LF M R V SW
Sbjct: 186 GNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIV 245
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N +ID Y+K G V +A + + ++V+SWN L+ Y Y E L LF M+R
Sbjct: 246 NALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL-----LSTSLLTMYAKCGVMD 403
PN+ +++S+L ACA++G IDIG+WIH YI K ++K V+ L TSL+ MYAKCG +D
Sbjct: 306 PNDVTMLSILPACAHLGAIDIGRWIHVYIDK-KLKGVVVTNASSLRTSLIDMYAKCGDID 364
Query: 404 LARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
A V D+ +++ +WN+MI G+ MHG+ A ++F M K G P+D TF+ +LSAC
Sbjct: 365 AAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSAC 424
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+H+GM+ G F M++ Y I PK+EHYGCM+DLLG +GL +++EE+++ +PME +
Sbjct: 425 SHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVI 484
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
W +LL AC H N ELG+ A+ L+++EP +PG YVLLSNIYA+ GKW+EV +R ++ +
Sbjct: 485 WCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLND 544
Query: 583 KELEKAV 589
K ++K V
Sbjct: 545 KGMKKKV 551
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 338/597 (56%), Gaps = 45/597 (7%)
Query: 42 KFTDTDNQR-----LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVL 96
+F+D + R IV + L S ++ ++H L+VSGL +A S+V+
Sbjct: 291 RFSDAEQARKLLDERKIVKVPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVI 350
Query: 97 KKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
+ S + + F+ I+ P F+ NT+++ + P A+ FY +K K ++ +
Sbjct: 351 RSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFY-KKAQEKGMKPD 409
Query: 157 HYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
+ TFP + K CA + +EG+++H+ ++K GF LD+FV NSLIH+Y+ CG+++ AR +F+
Sbjct: 410 NMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFD 469
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-------------------------- 250
+ V D+V+WNS+I GY + LF+ M
Sbjct: 470 EMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSM 529
Query: 251 -------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
E D++ N++I Y +G +++A +F M ++ V+ N MI YAK
Sbjct: 530 ADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAK 589
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
GN+ SA+ FD++ ++++SW+ ++ Y + + + L LF +M R KP+ + SV
Sbjct: 590 GGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASV 649
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
L+ACA++G +D+G+WIH Y+++ IK D ++ SL+ M+AKCG M A VF M EK+
Sbjct: 650 LSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDT 709
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
+SWNS+I+G +G ++AL +F M GP PN+ TF+ VL AC + +V EG +F+
Sbjct: 710 LSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFER 769
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M+ ++ +EP+++HYGC+V +L RAG + ++ ++++P+ P +W LL AC TH N
Sbjct: 770 MKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVA 829
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ ++ + L EL+P + G Y+LLSNIYAS +W + N+R+ M + + K+ S+V
Sbjct: 830 VAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVV 886
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 200/333 (60%), Gaps = 1/333 (0%)
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
MP ++VVSWN +I G+A G + AR FD+M RNVVSW L+ Y R Y E + LF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
M+ G P+E ++++V+ A +N+G I +G+ +H Y K I D + SL+ +YAK
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 400 GVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G + + VFD M ++ N+VSW S+I G+ MHG +ALE+F EM + G PN TF+ V
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSV 180
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
++AC+H G+V +G +F M Y I+P+++H+GC++D+LGRAG + ++E+++ LP+E
Sbjct: 181 INACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEV 240
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
+W LL CS + E+GK + + +LE G + +LSN+ G++ + E R+
Sbjct: 241 NVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARK 300
Query: 579 IMKEKELEKAVGSSLVHPGEFASESIVENCPPH 611
++ E+++ K G +LV F V+ H
Sbjct: 301 LLDERKIVKVPGLALVVTRSFVMMEAVKKLHAH 333
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 47/273 (17%)
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
P+ ++V+WN +I G+ E+ +AR LFD MP R++ +W +I GY A LF
Sbjct: 2 PMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFR 61
Query: 279 LM---------------------------------------PFRDVVSWNCMIDGYAKIG 299
M D N +ID YAKIG
Sbjct: 62 HMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIG 121
Query: 300 NVTSARNCFDRMC-MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
+V ++ FD M RN+VSW +++ + E L LF M R +PN + +SV+
Sbjct: 122 SVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVI 181
Query: 359 TACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKN 416
AC++ G+++ G + S + + I P++ ++ M + G + A + + + E N
Sbjct: 182 NACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVN 241
Query: 417 VVSWNSMIMG----YGMHGQGEKALEMFMEMEK 445
V+ W +++G YG G++A++M ++E+
Sbjct: 242 VIVWR-ILLGCCSKYGEVEMGKRAIKMISDLER 273
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 152/374 (40%), Gaps = 51/374 (13%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ MMA + + T + + + + G+ +H VK G D V NSLI +Y+
Sbjct: 60 FRHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAK 119
Query: 205 CGEVLDARKVFEDG-PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
G V ++ KVF++ +LV+W S+I G+ + A ELF M I T+ S
Sbjct: 120 IGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLS 179
Query: 260 MISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+I+ G +E F M + ++ + C+ID + G + A + + +
Sbjct: 180 VINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVE 239
Query: 315 -NVVSWNILLALYVRCKDYCECLRLFDRMIR--GDAKPNEASLMSVLTACAN-MGVIDIG 370
NV+ W ILL C Y E + + R I+ D + +VL+ N +G
Sbjct: 240 VNVIVWRILLGC---CSKYGE-VEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDA 295
Query: 371 QWIHSYIQKCRIKP----DVLLSTSLLTM-------------------YAKCGVM----- 402
+ + + +I ++++ S + M YA V+
Sbjct: 296 EQARKLLDERKIVKVPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYAL 355
Query: 403 ---DL--ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
DL A VF+ + WN+++ G + A+ + + +++G P++ TF
Sbjct: 356 QQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPF 415
Query: 458 VLSACTHAGMVLEG 471
VL AC EG
Sbjct: 416 VLKACAKTYAPKEG 429
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 325/571 (56%), Gaps = 41/571 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL-SVLFFDGIQEPDAF 122
LE C ++ + QIH+ + GLS D RV+ C S + + FD I +P F
Sbjct: 14 LEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLF 73
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ NT++K + +N P +S Y M+A ++ + +TFP L K +L+ GK +
Sbjct: 74 IWNTMIKGYSRINHPQNGVSMYL-LMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNH 132
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
VK GF+ +LFV+ + IHM+S+C V ARKVF+ G W++VTWN M+ GY + ++ +
Sbjct: 133 AVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKS 192
Query: 243 RELFDFMP---------------------------------------ERDIFTWNSMISG 263
+ LF M ER++ N +I
Sbjct: 193 KMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDM 252
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
+ G+M+ A +FD M RDV+SW ++ G+A IG + AR FD++ R+ VSW ++
Sbjct: 253 FAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMI 312
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
Y+R + E L LF M + KP+E +++S+LTACA++G +++G+W+ +YI K IK
Sbjct: 313 DGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIK 372
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
D + +L+ MY KCG + A+ VF M K+ +W +MI+G ++G GE+AL MF M
Sbjct: 373 NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNM 432
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
+ TP++ T+I VL ACTHAGMV +G +F M + I+P V HYGCMVDLLGRAG
Sbjct: 433 IEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGR 492
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
+ ++ E++ +P++ +WG+LL AC H N +L ++ A+ ++ELEP + YVLL NI
Sbjct: 493 LEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNI 552
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YA+ +W+ + +R++M E+ ++K G SL+
Sbjct: 553 YAACKRWENLRQVRKLMMERGIKKTPGCSLM 583
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/611 (36%), Positives = 332/611 (54%), Gaps = 43/611 (7%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC-TSLSSVSLSVLFFDGIQ 117
PIL ++ C+ K Q+H +L +GL D +A+++ +S SS+ + FD I
Sbjct: 34 PIL--IDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIP 91
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ + NT++++F P L + + + N YTFP + K + SL G+
Sbjct: 92 RPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQ 151
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+H ++K F DLF+ NSLIH YS G++ A VF D+V+WNSMI G+V+
Sbjct: 152 AIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGG 211
Query: 238 EVGFARELFDFM------PER---------------------------------DIFTWN 258
A +LF M P R ++ N
Sbjct: 212 SPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSN 271
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
+M+ YV G +E A LFD M +D+VSW MIDGYAK+G+ +AR FD M ++ +
Sbjct: 272 AMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITA 331
Query: 319 WNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN L++ Y + E L +F + + + KPNE +L S L ACA +G +D+G WIH YI
Sbjct: 332 WNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYI 391
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+K IK + ++TSL+ MY+KCG ++ A VF ++ ++V W++MI G MHG G A+
Sbjct: 392 KKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAI 451
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
++F +M++ PN TF +L AC+H+G+V EG +F+ M+ +Y + P +HY CMVD+
Sbjct: 452 DLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDI 511
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG + ++ EL+ K+P+ ++WGALL AC + N EL ++ L+E + + G Y
Sbjct: 512 LGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAY 571
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVY 617
VLLSNIYA GKWD V LR+ MK LEK G S + E +V + +Y
Sbjct: 572 VLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIY 631
Query: 618 SMLGEIGAQMK 628
S L EI A++K
Sbjct: 632 SKLDEIVARIK 642
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 209/427 (48%), Gaps = 56/427 (13%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG----EVLD- 210
N T P+L CA + L K++HA +++ G F S +++ C LD
Sbjct: 29 NPSTVPILIDKCANKKHL---KQLHAHMLRTGL---FFDPPSATKLFTACALSSPSSLDY 82
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNRE-----VGFARELFDFMPERDIFTWNSMISGYV 265
A KVF+ P +L TWN++I + + + + F + L + + +T+ +I
Sbjct: 83 ACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAAT 142
Query: 266 DVGDM---EAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+V + +A +G+ F D+ N +I Y+ +G++ SA F ++ +++VSWN
Sbjct: 143 EVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNS 202
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
+++ +V+ E L+LF RM +A+PN +++ VL+ACA ++ G+W YI++
Sbjct: 203 MISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNG 262
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG------------- 428
I +++LS ++L MY KCG ++ AR +FD M EK++VSW +MI GY
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD 322
Query: 429 ------------------MHGQGEKALEMFMEME-KRGPTPNDATFICVLSACTHAG-MV 468
+G+ ++AL +F E++ + PN+ T L+AC G M
Sbjct: 323 VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMD 382
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
L GW + + ++ K+ + ++D+ + G + + E+ + +W A+++
Sbjct: 383 LGGWIHVYIKKQGIKLNFHIT--TSLIDMYSKCGHLEKALEVFYSVERR-DVFVWSAMIA 439
Query: 529 ACSTHSN 535
+ H +
Sbjct: 440 GLAMHGH 446
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/471 (40%), Positives = 299/471 (63%), Gaps = 1/471 (0%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
+F L+ + CA + G+ H +I+K GFE D+ ++ L+ Y+ G++ A++VF
Sbjct: 12 SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGM 71
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
P D+V N+MI K+ V AR LFD M ER+ +WNSMI+ Y +GD+ +A +FD
Sbjct: 72 PRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMFD 131
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM-CMRNVVSWNILLALYVRCKDYCECLR 337
P +DVVSWN +IDGY K + +A+ F M RN V+WN +++ YV+C ++ +
Sbjct: 132 CNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAIS 191
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
+F +M + KP E +++S+L+ACA++G +D+G+WIH YI+ R+K DV+L +L+ MY
Sbjct: 192 MFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYC 251
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG ++ A +VF ++ KN+ WNS+I+G GM+G+GE+A+ F+ MEK G P+ TF+
Sbjct: 252 KCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVG 311
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+LS C+H+G++ G YF M +Y +EP VEHYGCMVDLLGRAG ++++ EL+ +PM+
Sbjct: 312 ILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
+ G+LL AC H +++LG+ V Q L+EL+P D G YV LSN+YAS +WD+V R
Sbjct: 372 PNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCR 431
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
++M ++ + K G S + E + + + + + L EI ++K
Sbjct: 432 KLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELK 482
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M+R D P++ S +L +CA G +G+ H I K + D++L T LL YAK G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
+ A+ VF M ++VV+ N+MI HG E+A +F M +R ++ C
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITC 116
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 14/239 (5%)
Query: 87 QDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYE 146
+D + + ++ C S V+ LF ++ NT++ +++ + FG ++
Sbjct: 136 KDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGE-FGTAISMFQ 194
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+M ++ V+ T L CA + +L G+ +H I ++D+ + N+LI MY CG
Sbjct: 195 QMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCG 254
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMIS 262
+ A VF ++ WNS+I G N A F M + I T+ ++S
Sbjct: 255 ALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILS 314
Query: 263 GYVDVGDMEAAN-------GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
G G + A G++ L P V + CM+D + G + A M M+
Sbjct: 315 GCSHSGLLSAGQRYFSEMLGVYGLEP--GVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/535 (38%), Positives = 305/535 (57%), Gaps = 34/535 (6%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGIQEPD 120
Q SC+T+ QIH ++V G + ++ A ++ ++S +++ + F I EPD
Sbjct: 18 QLWRSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPD 77
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
FM NT+++ P A+S Y +M V + +TFP + K C + ++ G VH
Sbjct: 78 TFMWNTMIRGSAQSPSPLNAISLY-SQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVH 136
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
R+ + GFE + FVRN+LI+ ++ CG++
Sbjct: 137 GRVFRLGFESNTFVRNTLIYFHANCGDL-------------------------------A 165
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
AR LFD +RD+ W+++ +GY G++ A LFD MP +D+VSWN MI GYAK G
Sbjct: 166 VARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGE 225
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ SAR FD + R+VV+WN ++A YV C + L +F+ M P+E +++S+L+A
Sbjct: 226 MESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSA 285
Query: 361 CANMGVIDIGQWIHSYIQKCRIKP-DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
C ++G +D GQ IH I + + VLL +L+ MYAKCG + A VF M EK+V +
Sbjct: 286 CTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVST 345
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WNS++ G HG EK++ +F EM K P++ TF+ VL AC+HAG V EG YFDLM+
Sbjct: 346 WNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMR 405
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y IEP + HYGCMVDLLGRAGL+ ++ + + + +E +W LL AC H N ELG
Sbjct: 406 DEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELG 465
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ L+++ + G YVLLSNIYAS G+WD VE +R++M + + K G SL+
Sbjct: 466 RRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLI 520
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 319/539 (59%), Gaps = 35/539 (6%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGIQEPDAFM 123
++C+ + QIH L++ G + + A ++ ++S +++ + F I EPD FM
Sbjct: 21 KNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDIFM 80
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
NT+M+ +P + Y +M + V+ + +TF L K C + + G VH ++
Sbjct: 81 WNTMMRGSSQSKNP-SKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKV 139
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K GFE++ FVRN+LI+ +S CG+++ AR +F D P +V+W+++ GY + E+G AR
Sbjct: 140 LKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVAR 199
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
++FD MP +D+ +WN MI+GYV G+ME A LFD P +DVV+WN MI GY G
Sbjct: 200 QIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQ 259
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F+ MRNV EC P+E +++S+L+ACA+
Sbjct: 260 ALEMFEE--MRNV----------------GEC-------------PDEVTMLSLLSACAD 288
Query: 364 MGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G + +G+ +H I + R VLL +L+ MYAKCG +++A VF M EK+V +WNS
Sbjct: 289 LGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNS 348
Query: 423 MIMGYGMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+I G HG E+++++F EM+ + PN+ TF+ V+ AC+HAG V EG YF LM+
Sbjct: 349 VIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRER 408
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y IEP + H+GCMVDLLGRAGL+ ++ EL++K+ +E +W LL AC H N ELG++
Sbjct: 409 YDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRL 468
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
+ L++L + G YVLLSNIYAS G+WD E +R++M + + K G SL+ + A
Sbjct: 469 ANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRA 527
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/575 (36%), Positives = 327/575 (56%), Gaps = 39/575 (6%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDS-FAASRVLKKLCTSLSSVS--LSVLFFDGIQ 117
L L++C ++K QIH ++ + S D+ S L LC + ++ ++
Sbjct: 41 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 100
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ + N I++ N+ Y++M++K + ++YT P + K CA R++REG+
Sbjct: 101 TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGE 160
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH + +K G D++V N+L+ MY+VC + ARKV
Sbjct: 161 EVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKV----------------------- 197
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR---DVVSWNCMIDG 294
FD P+RD+ +W +MI GYV +G GL+ + DV N ++D
Sbjct: 198 --------FDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDM 249
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y K G+ AR F M ++NVVSWN +++ + + E L +F +M R KP++ +L
Sbjct: 250 YLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTL 309
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
++VL +CAN+GV+++G+W+H+Y+ + +I+ D + +L+ MYAKCG +D A VF M
Sbjct: 310 VAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNR 369
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
K+V S+ +MI+G MHGQG KAL++F EM K G P++ TF+ VL+AC+H G+V EG Y
Sbjct: 370 KDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKY 429
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F+ M IY + P++EHYGCMVDLLGRAGL+ ++EE + +P+E + GALL AC H
Sbjct: 430 FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHG 489
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSL 593
ELG+ V + + ++EPR G YVL+SNIY+S +W + LR+ MKE+ LEK G SS+
Sbjct: 490 KVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSI 549
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G + P K I Y +L EI + +K
Sbjct: 550 ELDGVIHEFQKGDKSHPKIKEI-YKLLDEIMSHLK 583
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/612 (36%), Positives = 342/612 (55%), Gaps = 48/612 (7%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGI 116
HP L LE C + F QIH+ ++ +GL+ F S+++ S S +S ++ F+
Sbjct: 29 HPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEEN 88
Query: 117 QEP---DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
Q+ + F+ N++++ + + + P + + +M+ V+ N +TFP L K C ++
Sbjct: 89 QQHHKHNVFIWNSLIRGYSLSSSPL-SSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
EGK++HA +K + V S+IHMY+ GE+ AR VF+ + D V++ ++I GY
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF------DLMPFRDVV- 286
V + AR LFD +P +D+ +WN+MISGYV G E A F +++P + +
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 287 -------------------SW-------------NCMIDGYAKIGNVTSARNCFDRMCMR 314
SW N +ID Y K G AR FD + +
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK 327
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+V+SWN ++ Y Y E L LF+ M+R + KPN+ + + +L ACA +G +D+G+W+H
Sbjct: 328 DVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVH 387
Query: 375 SYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+YI K R + L TSL+ MYAKCG ++ A VF +M +N+ SWN+M+ G+ MHG
Sbjct: 388 AYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHA 447
Query: 434 EKALEMFMEMEKRGP-TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
E+AL +F EM +G P+D TF+ VLSACT AG+V G YF M + Y I PK++HYG
Sbjct: 448 ERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYG 507
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DLL RA ++E L+ + ME A+WG+LLSAC H E G+ VA+ L +LEP
Sbjct: 508 CMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPE 567
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+ G +VLLSNIYA G+WD+V +R + +K ++K G + + E +V + H
Sbjct: 568 NAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGD-KFHP 626
Query: 613 KC-IVYSMLGEI 623
+C +Y ML E+
Sbjct: 627 ECNNIYKMLNEV 638
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 337/607 (55%), Gaps = 61/607 (10%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
+ +L+ L+ C ++E Q H Q+ + GL F +L KL T S+ +L D
Sbjct: 1 MEQKMLRILQHCKNIRELKQTHLQIFIHGLQHSDF----MLPKLITVSSAFNL----LDY 52
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+A Y +M A VE N +TF L K ++L +
Sbjct: 53 ATHKEALRV--------------------YSRMKALMVEANSFTFTFLLKCFETSQALED 92
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL-DARKVFEDGPVWDLVTWNSMIDGYV 234
G+ +H I+K GF +FV+NSL+ Y+ C E L A +VFE+ P D+++WNSMI Y+
Sbjct: 93 GRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYM 152
Query: 235 KNREVGFARELFDFMPERDIFTWNS-------------------------------MISG 263
E+ A L D MPER+I TWNS MISG
Sbjct: 153 TRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISG 212
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
YV +GD+ AA +F MP + VVSW MI GYA G++ SA N F+ M ++NVVSWN ++
Sbjct: 213 YVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMI 272
Query: 324 ALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+ YV ++ + L +F M I G+ +P++ +L+S+L+ACA++G ++ G+WI+SYI+K ++
Sbjct: 273 SGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKL 332
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
+ L +L+ M+AKCG ++ A+ VF +M+++ +++W +M+ G ++G+ +A+ +F +
Sbjct: 333 HLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDK 392
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M G P+D FI VLSACTH G+V EG FD M + + I+P++EHYGCMVDLLGRAG
Sbjct: 393 MCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAG 452
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSN 562
+ ++ +++ ++ +W LL C H N +L K V + +M+ EP +P L+SN
Sbjct: 453 KLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSN 512
Query: 563 IYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGE 622
+ AS G+W++V + R M+++ +EK G S + G E + ++ ++ +Y L
Sbjct: 513 LSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRALSH 572
Query: 623 IGAQMKM 629
+M
Sbjct: 573 YKNATEM 579
>gi|215741011|dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/469 (42%), Positives = 297/469 (63%), Gaps = 3/469 (0%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
V + YTFP + K C R G VH V+ G + DLF RN+LI Y G+ R
Sbjct: 6 VAPDAYTFPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGR 65
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV-GDME 271
KVF+ G V DLV+WNSM+ GYV EV A++LFD M +RD F+W +MI GY ++ G ++
Sbjct: 66 KVFDHG-VRDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVD 124
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
A LFD MP RD+V WN MIDGYA+ G + AR F+ M RNV+SW+I++ YVR +
Sbjct: 125 RARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGE 184
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E L F RM+R KP+ + + + ACA +G ++ G+W+HSY++K ++ DV++ T+
Sbjct: 185 PNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTA 244
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ MY KCG +DLA+ +F++M +K+VV+WN MI+G G HG G A+++F +ME +
Sbjct: 245 LIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMD 304
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
D + + VL++CTHAG+V EG F M++ +EPKVEHYG ++DLLGRAG + + +
Sbjct: 305 DLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTI 364
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+PME P LWG+LL++C +H EL ++ + L L D G YVLLSNIYA EG WD
Sbjct: 365 ETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWD 424
Query: 572 EVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSM 619
+V +R++M + ++K +G S++ G+ + PH++ I ++
Sbjct: 425 DVFRIRKLMSAEGMKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTL 473
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M R P+ + +VL AC +G +H + + D+ +L++ Y + G
Sbjct: 1 MRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGD 60
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
R VFD+ +++VSWNSM+ GY G+ + A ++F EM +R
Sbjct: 61 CRSGRKVFDHGV-RDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQR 104
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/580 (37%), Positives = 327/580 (56%), Gaps = 45/580 (7%)
Query: 31 PPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSF 90
PP W + + + LP + L + V+E +H Q+L GL +
Sbjct: 338 PPPTWGAPSQRRLVEQHLASLP---------RGLPRAAHVRE---LHAQVLKQGLHLNPR 385
Query: 91 AASRVLKKLCTSLSSVSLSVLFFDGIQEP--DAFMCNTIMKSFLMLNDPFGALSFYYEKM 148
AA+R++ L + S FD I++P DAF+ NT+++++ + P AL+ +
Sbjct: 386 AAARLVSAYAL-LRLLPSSRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAF---- 440
Query: 149 MAKFVEHNHYTFPLLGKV--CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+ + +T+ L K AG+ +R VH+ +VK G D FV N+LI YS G
Sbjct: 441 -SAMPRRDSFTYSFLIKALSAAGVAPVR---AVHSHVVKLGSVEDTFVGNALIDAYSKNG 496
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD 266
DARKVF++ P D+V+WN+ + V+ E+ AR+LFD MPE+D +WN+++ GY
Sbjct: 497 GFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTK 556
Query: 267 VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALY 326
G++EAA LF MP R+VVSW+ M+ GY K G++ AR FD+M +N+V+W I+
Sbjct: 557 AGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIM---- 612
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
M + + A+++S+L ACA G + +G+ IH Y++K +
Sbjct: 613 ---------------MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRST 657
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+ +L+ M+ KCG ++ A VFD T +K+ VSWNS+I G+ MHG G+KALE+F +M++
Sbjct: 658 HVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQ 717
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
+G P+ T I VLSACTH G V EG YF M+R Y I P++EHYGCM+DLLGR GL++
Sbjct: 718 QGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIK 777
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ +L+ +P E +WG+LLSAC H N E +I L +L+P + G Y +LSNIYA
Sbjct: 778 EAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYA 837
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
G+W ++ R MK +K GSS V E E V
Sbjct: 838 EAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTV 877
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 325/567 (57%), Gaps = 4/567 (0%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG-IQEPDAF 122
L+ C T K QIH +L + + + ++ + C LSS + FD D F
Sbjct: 9 LQRCRTRKTLLQIHALILRNAIDANVNILTKFITT-CGQLSSTRHARHLFDNRSHRGDTF 67
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+CN+++KS +++ A + Y + +++TF +L K CA ++ EG + H
Sbjct: 68 LCNSMIKSHVVMRQLADAFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAVWEGLETHGH 127
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+VK GF D++V +L+ MY+ G + ARKVF D P LV+W ++I GYV+ ++G A
Sbjct: 128 VVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGNA 187
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
LF MP RD +N +I GYV VGDME+A LFD MP R+V+SW MI GY G+V
Sbjct: 188 WFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGYCNNGDVL 247
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTAC 361
SAR FD M +N+VSWN ++ Y + K E L+LF + +PNE +++S+L A
Sbjct: 248 SARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVTVVSILPAI 307
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A +G +++G+W+H ++Q+ ++ V + TSL+ MY KCG + AR VF + +K +WN
Sbjct: 308 ATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKARKVFSEIPKKETATWN 367
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
++I G+ M+G +ALE F EM++ G PND T VLSAC+H G+V EG F M
Sbjct: 368 ALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKGQFKAMIE- 426
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+ PK+EHYGC+VDLLGRAG + ++E L+ +P EA + + AC ++ +
Sbjct: 427 SGLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSFSFACGFSNDVTRAQR 486
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFAS 601
V + +EP + G YV++ N+YA E +W +V+ + +M+ + +K VGSS + S
Sbjct: 487 VLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRGAKKEVGSSAIEVDSRVS 546
Query: 602 ESIVENCPPHRKCIVYSMLGEIGAQMK 628
E I + ++ S++G++ M+
Sbjct: 547 EFISGGIAHPQLDVIESVIGQLWIHMR 573
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 334/582 (57%), Gaps = 47/582 (8%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFFD-- 114
P +Q L C T ++ +IH +L+ +GL ++S ++R++ S + L F
Sbjct: 17 PTIQLLGRCKTSEDVSKIHARLITTGLIKNSNLSTRIVLAFAASPRPYLAEFARLVFREY 76
Query: 115 -------GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
G + D F+ N ++KS DP AL + M+ V + ++ L+ K C
Sbjct: 77 HVCSSSPGGEVEDPFLWNAVIKSHSHGKDPKQAL-LLFCLMLENGVSVDKFSMSLVLKAC 135
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
+ + ++ G ++H + K G DLF++N LI +Y CG + AR++F+ P D V++N
Sbjct: 136 SRLGFVKGGLQIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFN 195
Query: 228 SMIDGYVKNREVGFARELFDFMP----------------------------------ERD 253
SMIDGYVK + ARELFD MP E+D
Sbjct: 196 SMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKD 255
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+ +WNSMI GYV G +E A LFD MP RDVV+W MIDGYAK+G V A+ FD+M
Sbjct: 256 LISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPH 315
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQW 372
R+VVS+N ++A YV+ K + E L +F M + P+E +L+ VL+A A +G +
Sbjct: 316 RDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMD 375
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H YI + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG
Sbjct: 376 MHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGL 435
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
GE A +M +++E+R P+D TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYG
Sbjct: 436 GESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 495
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVD+L R+G + ++ L+ ++P+E +W L+AC+ H E G++V +HL+
Sbjct: 496 CMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGY 555
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+P YVLLSN+YAS GKW +V +R +MKE+++EK G S +
Sbjct: 556 NPSSYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIPGCSWI 597
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/621 (33%), Positives = 338/621 (54%), Gaps = 50/621 (8%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL---SSVSLSV 110
+ L +P L LE C ++ + QI +Q++++GL +D FA+SR++ S ++
Sbjct: 3 LQLINPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNI 62
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
LF + P+ F N ++ FL +P A+ Y + + ++YT+PLL K CA +
Sbjct: 63 LF--NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARL 120
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+R G ++ ++ GF+ D+FV N++IH+ CG++ ARK+F+ V DLV+WNSMI
Sbjct: 121 SLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMI 180
Query: 231 DGYVKNREVGFARELFDFMPE-----------------------------RDIFTW---- 257
+GYV+ G+A E +F E R+ +
Sbjct: 181 NGYVRR---GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN 237
Query: 258 ---------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
N+++ Y+ G++E+A LFD M + +VSW M+ GYA+ G + A F
Sbjct: 238 GLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLF 297
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D M ++VV WN ++ YV E L LF+ M + P+E +++S L+AC+ +G +D
Sbjct: 298 DEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALD 357
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+G WIH YI+K + +V L T+L+ MYAKCG + A VF + +N ++W ++I G
Sbjct: 358 VGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLA 417
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
+HG A+ F EM P++ TF+ +LSAC H G+V EG YF M + + PK+
Sbjct: 418 LHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKL 477
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY CMVDLLGRAGL+ ++EEL+ +P+EA +WGAL AC H N +G+ A L++
Sbjct: 478 KHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQ 537
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
++P D G YVLL+N+Y W E R++M+++ +EK G S + E IV +
Sbjct: 538 MDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDK 597
Query: 609 PPHRKCIVYSMLGEIGAQMKM 629
+ +Y L ++ Q+++
Sbjct: 598 SHPQSEQIYECLIQLTRQLEL 618
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/614 (34%), Positives = 345/614 (56%), Gaps = 48/614 (7%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVLFFD 114
P L L C T + +Q+H +++ +G ++S ++++ +S L + V F
Sbjct: 16 PTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTR 75
Query: 115 -GIQ-------EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+Q + D F+ N ++KS+ N+P AL + + F + ++F L+ K
Sbjct: 76 YAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCV-DKFSFSLILKA 134
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA + + EGK++H ++K +LF+ N LI MY CG++ AR+VF+ P+ D V++
Sbjct: 135 CARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSY 194
Query: 227 NSMIDGYVKNREVGFARELFDFMP----------------------------------ER 252
NSMIDGYVK+ + ARELFD MP ER
Sbjct: 195 NSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPER 254
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+ +WN++I G+ G +E A+ LF+ MP RDV+SW+ MIDGYAK+G++ AR FD M
Sbjct: 255 DLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMP 314
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQ 371
++VV++N ++A Y + Y E L +F M R + P+E +L+ L+A + +G ++
Sbjct: 315 DKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAA 374
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+H+Y + I ++ +L+ MY+KCG ++ A +FD + +K + WN+MI G +G
Sbjct: 375 SMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNG 434
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
G+ A M +EM + P+ TFI VL+AC HAG+V EG F+LM++++K+EPK++HY
Sbjct: 435 LGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHY 494
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCMVD+LG+AGL+ + + + ++P+E +W LLSAC H N +G+++A+HLM ++
Sbjct: 495 GCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDS 554
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH 611
+ YVLLSNIYA G W +R +MK++ L K G S + E +V +
Sbjct: 555 CNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHP 614
Query: 612 RKCIVYSMLGEIGA 625
+YS+L GA
Sbjct: 615 YVSEIYSVLDGFGA 628
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/583 (36%), Positives = 331/583 (56%), Gaps = 48/583 (8%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF----- 113
P ++ L SC ++ ++IH +L+ +G ++ +R++ S + F
Sbjct: 16 PTIKLLGSCKNSEDVNKIHARLVTNGFIKNPNLTTRIVLAFAASRRPYXVEFARFVFHEY 75
Query: 114 -------DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
G D ++ N ++KS DP AL + M+ V + ++ L+ K
Sbjct: 76 XIRSFSPGGGDXEDXYLWNAVIKSHSHGTDPRRAL-LLFCLMLENGVSVDKFSLSLVLKA 134
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + ++EG ++H + K G DLF++N LI +Y CG + AR++F+ P D V++
Sbjct: 135 CSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSY 194
Query: 227 NSMIDGYVKNREVGFARELFDFMPE----------------------------------R 252
NSMIDGYVK ARELFD MPE +
Sbjct: 195 NSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDK 254
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+ +WNSMI GYV G +E A LFD+MP RDVV+W+ MIDGYAK+G V A+ FD+M
Sbjct: 255 DLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMP 314
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQ 371
R+VVS+N ++A YV+ + E L +F M + P+E +L+ VL+A A +G +
Sbjct: 315 HRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 374
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+H YI + + L +L+ MY+KCG + A VF + K++ WN+MI G +HG
Sbjct: 375 DMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHG 434
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
GE A +M +++E+R P+D TF+ +L+AC+H+G+V EG F+LM+R +KIEP+++HY
Sbjct: 435 LGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 494
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCMVD+L R+G + ++ L+ ++P+E +W L+AC+ H E G++VA+HL+
Sbjct: 495 GCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAG 554
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+P YVLLSN+YAS GKW +V +R IMKE+++EK G S +
Sbjct: 555 YNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWI 597
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/605 (35%), Positives = 331/605 (54%), Gaps = 72/605 (11%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAF 122
LE C T+++ ++IH L+ + L A +L+ L +S+ +V F I EPD+
Sbjct: 31 LEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSP 90
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N +++ F + P A+ + E M V+ + +TFP + KVC+ +++L EG+++HA
Sbjct: 91 AYNIMIRGFTLKQSPHEAILLFKE-MHENSVQPDEFTFPCILKVCSRLQALSEGEQIHAL 149
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
I+KCGF FV+N+LIHMY+ CGEV EV A
Sbjct: 150 IMKCGFGSHGFVKNTLIHMYANCGEV-----------------------------EV--A 178
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV---------------- 286
R +FD M ER++ TWNSM +GY G+ E LF M D+
Sbjct: 179 RRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRL 238
Query: 287 ------SW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
W ++D YAK G V +AR FD+M R+VV+W+ ++
Sbjct: 239 ADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMI 298
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
+ Y + E L LF M + + PNE +++S+L++CA +G ++ G+W+H +I+K R+K
Sbjct: 299 SGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMK 358
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
V L T+L+ YAKCG ++ + VF M KNV+SW +I G +GQG+KALE F M
Sbjct: 359 LTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLM 418
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
++ PND TFI VLSAC+HAG+V EG F M R + IEP++EHYGCMVD+LGRAGL
Sbjct: 419 LEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGL 478
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
+ ++ + + +P++ +W LL++C H N E+G+ + L+ LEP G Y+LLSNI
Sbjct: 479 IEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNI 538
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
YAS G+W++ +R MKEK ++K G SL+ E E+ + +Y+ + ++
Sbjct: 539 YASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDM 598
Query: 624 GAQMK 628
Q+K
Sbjct: 599 MKQIK 603
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 310/523 (59%), Gaps = 46/523 (8%)
Query: 76 IHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
IH Q++ +GL ++A S++++ L + ++ F+ IQEP+ + NT+ + +
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+DP AL + Y M++ + N YTFP L K CA ++ REG+++H ++K G++LDL+
Sbjct: 66 SSDPVSAL-YLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V SLI MY G + DARKVF+ D+V++ ++I GY + A++LFD +P +D
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 184
Query: 254 IFTWNSMISGYVDVGDMEAANGLF-DLMPF-------------------------RDVVS 287
+ +WN+MISGY + G+ + A LF D+M R V
Sbjct: 185 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 244
Query: 288 W-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
W N +ID Y+K G V +A F+ + ++V+SWN L+ Y Y E
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS---TS 391
L LF M+R PN+ +++S+L ACA++G IDIG+WIH YI K R+K S TS
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINK-RLKGVTNASSLLTS 363
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ MYAKCG ++ A+ VFD+M +++ SWN+MI G+ MHG+ A ++F +M K G P+
Sbjct: 364 LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPD 423
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
D TF+ +LSAC+H+GM+ G F M + YKI PK+EHYGCM+DLLG GL ++++E++
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMI 483
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
+PME +W +LL AC H+N ELG+ AQ+L+++EP P
Sbjct: 484 RTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPETP 526
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 326/563 (57%), Gaps = 38/563 (6%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQEP-D 120
L++C K+ Q+HT L+ + L ++ +A R+L + +L S++ + FD + P +
Sbjct: 38 LQNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTVDIPRN 97
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMM--AKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
+FM T++K++ +P A +FY +M+ ++V N +TF + C+ + EGK+
Sbjct: 98 SFMYTTMIKAYANFGNPREAFAFY-SRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQ 156
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
HA+++K FE + +WNS++D Y K E
Sbjct: 157 AHAQMIKFPFEFGVH-------------------------------SWNSLLDFYGKVGE 185
Query: 239 VGFA-RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
VG R +FD + D+ +WN +I+GYV GD++ A LFD MP RDVVSW M+ GYA
Sbjct: 186 VGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYAD 245
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G ++ A FD M RN+VSW+ L+ Y++ Y + L LF M K +E + ++
Sbjct: 246 AGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTL 305
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
L+ACA +G +D G+W+H YI K IK D LST+L+ MY+KCG +D+A VF +K V
Sbjct: 306 LSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKV 365
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
W+SMI G MH GEKA+E+F +M + G P++ T+I +L+ACTH+G+V G F+
Sbjct: 366 FVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNR 425
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M K +P+++HYGC+VDLLGRAGL+ D+ +V +P++A PA+W ALLSAC H N E
Sbjct: 426 MVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVE 485
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
LG+ V + L+++EP++ YVL SN+YA+ +WD LRR MK + ++K G S +
Sbjct: 486 LGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELN 545
Query: 598 EFASESIVENCPPHRKCIVYSML 620
E + + + ++Y +L
Sbjct: 546 GAVHEFVSRDHSHPQSQVIYELL 568
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/535 (37%), Positives = 319/535 (59%), Gaps = 17/535 (3%)
Query: 71 KEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKS 130
+ +QIH QL+VSGL + F ++ + ++ + + FD EP F+ N I++
Sbjct: 85 RHLNQIHAQLVVSGLVESGFLVTKFVNA-SWNIGEIGYARKVFDEFPEPSVFLWNAIIRG 143
Query: 131 FLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL 190
+ N FG Y +M A V + +T P + K C+G+ L GK+VH +I + GFE
Sbjct: 144 YSSHN-FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFES 202
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+FV+N L+ +Y+ CG V AR VFE ++V+W SMI GY +N A +F M
Sbjct: 203 DVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMR 262
Query: 251 ERDIF-TWNSMIS---GYVDVGDMEAANGLFDL-----MPFRD--VVSWNCMIDGYAKIG 299
+R++ W +++S Y DV D+E + + F ++S M YAK G
Sbjct: 263 QRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAM---YAKCG 319
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V AR+ FD+M + NV+ WN +++ Y + E + LF MI + + + ++ S +
Sbjct: 320 QVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAIL 379
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G +D+ +W+ YI K + DV ++T+L+ M+AKCG +DLAR VFD +K+VV
Sbjct: 380 ACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVV 439
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W++MI+GYG+HG+G+ A+++F M++ G PND TF+ +L+AC H+G+V EGW F M
Sbjct: 440 WSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM- 498
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ Y IE + +HY C+VDLLGR+G + ++ + ++ +P+E G ++WGALL AC + + LG
Sbjct: 499 KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLG 558
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ L L+P + G YV LSN+YAS WD V +R +M+EK L K +G SL+
Sbjct: 559 EYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLI 613
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 332/615 (53%), Gaps = 42/615 (6%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFD 114
L +P+L LE C + QI Q++++GL D FA+SR++ S S + SV
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH--NHYTFPLLGKVCAGIRS 172
GI+ P+ F N ++ F +P + Y + + E +H+T+P+L KVCA +R
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
G + ++K EL V N+ IHM++ CG++ +ARKVF++ PV DLV+WN +I+G
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 233 YVKNRE-----------------------VGF------------ARELFDFMPERDIFTW 257
Y K E +G +E ++++ E +
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 258 NSMISGYVDV----GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+++ +D+ GD+ A +FD + R +VSW MI GYA+ G + +R FD M
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
++VV WN ++ V+ K + L LF M + KP+E +++ L+AC+ +G +D+G WI
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H YI+K + +V L TSL+ MYAKCG + A +VF + +N +++ ++I G +HG
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
A+ F EM G P++ TFI +LSAC H GM+ G YF M+ + + P+++HY
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGRAGL+ +++ L+ +PMEA A+WGALL C H N ELG+ A+ L+EL+P D
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 591
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
G YVLL +Y W++ + RR+M E+ +EK G S + E IV +
Sbjct: 592 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 651
Query: 614 CIVYSMLGEIGAQMK 628
+Y L +G M+
Sbjct: 652 EKIYDRLHCLGRHMR 666
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/605 (34%), Positives = 336/605 (55%), Gaps = 46/605 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQEPDA 121
L++C +++ QI TQ+L +G Q ++ + CT S+ ++ + F+ I P
Sbjct: 39 LKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMV-CCTDPSIGNLHYAERIFNYIDIPGL 97
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
F+ N ++K+F N F + ++ + + +++T+P + K + +REG+KV+
Sbjct: 98 FIYNLVIKAFTK-NGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYG 156
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE--- 238
+VK G E D +V NSL+ MY+ G V + R+VFE+ P D+V+WN +I GYVK R
Sbjct: 157 FVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYED 216
Query: 239 ---------------------------------VGFARELFDFMPERDIFT---WNSMIS 262
+ +E+ ++ E+ FT N+++
Sbjct: 217 AVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVD 276
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
Y G + A +F+ MP + V+ W M+ GY G + AR F+R +R+VV W +
Sbjct: 277 MYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAM 336
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+ YV+ + + + LF M P+ +L+++LT CA +G ++ G+WIH YI + +I
Sbjct: 337 INGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKI 396
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
D ++ T+L+ MYAKCG ++ + +F+ + EK+ SW S+I G M+G+ KALE+F E
Sbjct: 397 MIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAE 456
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M + G P+D TFI VLSAC+H G+V EG +F M +Y+IEPK+EHYGC++DLLGRAG
Sbjct: 457 MVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAG 516
Query: 503 LMRDSEELVSKLP---MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
+ ++EEL+ K P E L+GALLSAC TH N E+G+ VA+ L+ +E D + L
Sbjct: 517 QLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTL 576
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSM 619
L+NIYAS +W++V +RR MK+ ++K G S V E +V + +YSM
Sbjct: 577 LANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSM 636
Query: 620 LGEIG 624
L I
Sbjct: 637 LDSIA 641
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 340/582 (58%), Gaps = 17/582 (2%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL--SVLFFDG 115
HP L LE C+T+ + QIH Q+L + L D F+AS+++ C S SL + L F+
Sbjct: 41 HPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVA-FCALHDSGSLPYARLVFNQ 99
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I P F CN+I++ + N P A+ FY + MM + ++ + +TFP L K C L E
Sbjct: 100 IPNPTTFTCNSIIRGYTNKNLPRQAILFY-QLMMLQGLDPDRFTFPSLFKSCG---VLCE 155
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK++H K GF D +++N+L++MYS CG ++ ARKVF+ +V+W +MI Y +
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 215
Query: 236 NREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP-----FRDVV 286
A +LF M + T ++++ D+E A + + F V+
Sbjct: 216 WDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVL 275
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
+ + ++D Y K G AR+ F++M +N+ WNI++ +V DY E L LF+ M
Sbjct: 276 T-SALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 334
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
K ++ ++ S+L AC ++G +++G+W+H YI+K +I+ DV L T+L+ MYAKCG ++ A
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
VF M EK+V++W ++I+G M GQG KALE+F EM+ P+ TF+ VL+AC+HAG
Sbjct: 395 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 454
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+V EG YF+ M Y I+P +EHYGCMVD+LGRAG + ++E+L+ +PM + L
Sbjct: 455 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 514
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
LSAC H N + + AQ L+EL+P++ G YVLLSNIY+S W+ + +R +M E+ ++
Sbjct: 515 LSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 574
Query: 587 KAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
K G S + G E + + + +Y L ++ ++K
Sbjct: 575 KPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLK 616
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/575 (36%), Positives = 325/575 (56%), Gaps = 18/575 (3%)
Query: 36 ANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRV 95
A P P++ +RL L+ + L+ V+E +H QLL GL D AAS++
Sbjct: 41 ALRPAPRWGAPSQRRLVEQHLA-SLPHGLQHLHHVQE---LHAQLLKHGLHLDPLAASKL 96
Query: 96 LKKLCTSLSSVSLSVLFFDGIQEPDA--FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
+ + S F P A F+ NT+++++ + P A+S + +
Sbjct: 97 ISSYALQ-RRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLF-----SAMP 150
Query: 154 EHNHYTFPLLGKV--CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA 211
+ + +T+ L K +G+ LR VH+ +VK G D +V N+LI YS G LDA
Sbjct: 151 QRDSFTYSFLIKALSSSGLTPLR---AVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDA 207
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
KVFE+ P D V+WNS + V+ EV AR +FD MP++D +WN+++ GY G ME
Sbjct: 208 SKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKME 267
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
A LF MP R+VVSW+ ++ GY K G++ AR FD+M +N+V+W I+++ +
Sbjct: 268 DAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGL 327
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E RLF +M + + A+++S+L ACA G + +G+ IH Y++ ++ + +
Sbjct: 328 VEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNA 387
Query: 392 LLTMYAKCGVMDLARNVFDN-MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
++ M+ KCG ++ A VFD + EK+ VSWN++I G+ MHG G+KAL+ F +M+ +G P
Sbjct: 388 MIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRP 447
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ T I VLSACTH G V EG +F M+R Y I P++EHYGCM+DLLGR GL+ ++ L
Sbjct: 448 DAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGL 507
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ +P + +WG+LLSAC H N E +I L +L+P + G Y +LSNIYA G+W
Sbjct: 508 IKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQW 567
Query: 571 DEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
++ R MK +K+ GSS + E E V
Sbjct: 568 SDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTV 602
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 348/618 (56%), Gaps = 54/618 (8%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAF 122
LE+C+T+ E +QIH+Q + +GLS + ++V+ CT S V + FD I +P F
Sbjct: 42 LETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVF 101
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ NT++K + +N +S Y + M+ ++ + +TFP L K +L+ GK +
Sbjct: 102 IWNTMIKGYSRINCSESGVSLY-KLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNH 160
Query: 183 IVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
V GF + +LFV+ IH++S+CG V ARK+F+ G W++VTWN ++ GY + +
Sbjct: 161 AVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEE 220
Query: 242 ARELFDFMPER------------------------------------------DIFTWNS 259
++ LF M ++ ++ N+
Sbjct: 221 SKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENA 280
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
+I + G+M+AA G+FD M RDV+SW ++ G+A + AR FD+M R+ VSW
Sbjct: 281 LIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSW 340
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
++ Y+R + E L LF M + KP+E +++S+LTACA++G +++G+W +YI K
Sbjct: 341 TAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDK 400
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
+IK D + +L+ MY KCG ++ A+ +F+ M +K+ +W +MI+G +G GE+AL M
Sbjct: 401 NKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTM 460
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
F M + TP++ T+I V+ ACTH G+V +G +F M + I+P + HYGCMVDLLG
Sbjct: 461 FSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLG 520
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
RAG ++++ E++ +P++ +WG+LL AC H N +L ++ A ++ELEP + YVL
Sbjct: 521 RAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVL 580
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYS 618
L NIYA+ KW + N+R++M E+ ++K G SL+ E + + P K
Sbjct: 581 LCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSK----- 635
Query: 619 MLGEIGAQMKMCRRDVAS 636
EI A+++ ++D+++
Sbjct: 636 ---EIYAKLENMKQDLSN 650
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/638 (32%), Positives = 338/638 (52%), Gaps = 46/638 (7%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P K T+ ++ S+P+L LE+C+++ + +IH Q++ +GL D FA SR++
Sbjct: 36 PHHKDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAF 95
Query: 99 LCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
S ++ + + F N ++ ++ +P A+ Y + ++
Sbjct: 96 CAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDN 155
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
YT+PLL KVCAG ++ +++ GF+ DLFV N++IH+ CGE+L ARK+F++
Sbjct: 156 YTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDE 215
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDF---------MPER---------------- 252
V DLV+WNS+I+GYV+ G A E FD MP+
Sbjct: 216 SCVRDLVSWNSIINGYVR---CGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENL 272
Query: 253 -----------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
+ N+++ Y+ ++EAA LF+ M + VVSW M+ GY
Sbjct: 273 ALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGY 332
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
AK G + SA F+ M ++VV WN L+ +V+ K E L LF M P++ +++
Sbjct: 333 AKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVV 392
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+ L+AC+ +G +D+G W+H Y+ K + +V L T+L+ MYAKCG + A VF+ M +
Sbjct: 393 NCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR 452
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
N ++W ++I G +HGQ A+ F EM G P++ TFI VLSAC H G+V +G YF
Sbjct: 453 NSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYF 512
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
M Y I PK++HY C+VDLLGRAG + ++EEL+ +P E +WGAL H N
Sbjct: 513 YQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 572
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+G+ A L+EL+P D G YVLL+N+Y W++ +R++M+E+ +EK G S +
Sbjct: 573 VHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIE 632
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD 633
+ I+ + + +Y L + Q+++ D
Sbjct: 633 MNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVD 670
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/638 (32%), Positives = 338/638 (52%), Gaps = 46/638 (7%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P K T+ ++ S+P+L LE+C+++ + +IH Q++ +GL D FA SR++
Sbjct: 36 PHHKDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAF 95
Query: 99 LCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
S ++ + + F N ++ ++ +P A+ Y + ++
Sbjct: 96 CAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDN 155
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
YT+PLL KVCAG ++ +++ GF+ DLFV N++IH+ CGE+L ARK+F++
Sbjct: 156 YTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDE 215
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDF---------MPER---------------- 252
V DLV+WNS+I+GYV+ G A E FD MP+
Sbjct: 216 SCVRDLVSWNSIINGYVR---CGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENL 272
Query: 253 -----------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
+ N+++ Y+ ++EAA LF+ M + VVSW M+ GY
Sbjct: 273 ALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGY 332
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
AK G + SA F+ M ++VV WN L+ +V+ K E L LF M P++ +++
Sbjct: 333 AKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVV 392
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+ L+AC+ +G +D+G W+H Y+ K + +V L T+L+ MYAKCG + A VF+ M +
Sbjct: 393 NCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR 452
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
N ++W ++I G +HGQ A+ F EM G P++ TFI VLSAC H G+V +G YF
Sbjct: 453 NSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYF 512
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
M Y I PK++HY C+VDLLGRAG + ++EEL+ +P E +WGAL H N
Sbjct: 513 YQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 572
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+G+ A L+EL+P D G YVLL+N+Y W++ +R++M+E+ +EK G S +
Sbjct: 573 VHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIE 632
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD 633
+ I+ + + +Y L + Q+++ D
Sbjct: 633 MNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVD 670
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/578 (36%), Positives = 334/578 (57%), Gaps = 46/578 (7%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVLFFDGI- 116
Q L SC T + ++IH +L+ +G+ ++S +R++ +S L+ + V +
Sbjct: 1 QLLGSCKTADDVNKIHARLITTGVIKNSNLTTRIVLAFASSRRQYLAEFARCVFEEHHVY 60
Query: 117 -----QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
+ D F+ N ++KS DP +L F + M+ V + ++ L+ K C+ +
Sbjct: 61 SLPYGETEDPFLWNAVIKSHSHGTDPRRSL-FLFCLMLENGVSVDKFSLSLVLKACSRLG 119
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++ G +H + K G DLF++N LI +Y CG + +R+VF+ P D V++NSMID
Sbjct: 120 FVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMID 179
Query: 232 GYVKNREVGFARELFDFMP----------------------------------ERDIFTW 257
GYVK + ARELFD MP E+D+ +W
Sbjct: 180 GYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDLISW 239
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
NSMI GYV G +E A LFD+MP RDV++W MIDGYAK+G + A+ FD++ R+VV
Sbjct: 240 NSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVV 299
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
++N ++A YV+ K + E L LF +M + P+E +L+ VL+A A +G + +H Y
Sbjct: 300 AYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHFY 359
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I K + L +L+ MY+KCG + A VF + KN+ WN++I G +HG G A
Sbjct: 360 IVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHGLGGPA 419
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+M +++E+ P+D TFI VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMVD
Sbjct: 420 FDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 479
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
+L R+G + ++ L+ K+P+E +W L+ACS H E+G++VA+HL+ +P
Sbjct: 480 ILSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQAGYNPSS 539
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+YAS G W +V +R +MKE++++K G S +
Sbjct: 540 YVLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWI 577
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 312/556 (56%), Gaps = 34/556 (6%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
++ ++ + +QD + ++ + L T + + +VL + ++ P+ F+ N ++K F+
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALST-FNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSY 59
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
P AL Y + + A V YTFP L K C + LR + VH + + GF+ +FV+
Sbjct: 60 QPVQALELYVQMLRAN-VSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQ 118
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
SL+ YS G + ++ +VF++ MPERD+F
Sbjct: 119 TSLVDFYSSMGRIEESVRVFDE-------------------------------MPERDVF 147
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
W +M+SG V VGDM +A LFD+MP R++ +WN +IDGYA++ V A F++M R+
Sbjct: 148 AWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARD 207
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
++SW ++ Y + K + E L +F+ M + P+E ++ +V++ACA++G +D+G+ IH
Sbjct: 208 IISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHY 267
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
YI + DV + ++L+ MYAKCG +D + +F + EKN+ WNS+I G +HG E+
Sbjct: 268 YIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEE 327
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL MF +ME+ PN TF+ VLSAC HAG++ EG F M R + I P VEHYGCMV
Sbjct: 328 ALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMV 387
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLL +AGL+ ++ +L+ + +E +WGALLS C H N E+ ++ A LM LEP + G
Sbjct: 388 DLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSG 447
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV-GSSLVHPGEFASESIVENCPPHRKC 614
Y LL N+ A +W E +R MKE+ +EK GSS + + +
Sbjct: 448 YYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQFAASDKSHAASD 507
Query: 615 IVYSMLGEIGAQMKMC 630
+YS+L E+ QMK+
Sbjct: 508 EIYSLLAELDGQMKLA 523
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/580 (36%), Positives = 331/580 (57%), Gaps = 46/580 (7%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF----- 113
P ++ L SC ++ ++IH +L+ +G ++ +R++ S S F
Sbjct: 16 PTIKLLGSCKNSEDVNKIHARLITNGFIKNPNLTTRIVLDFADSRRSYLAEFARFVFHEY 75
Query: 114 ----DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
+G E D F+ N ++KS DP AL + M+ V + ++ L+ K C+
Sbjct: 76 HVCSNGDFE-DPFLWNAVIKSHSHGLDPRKAL-LLFCLMLETGVSVDKFSLSLVLKACSR 133
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ ++EG ++H + K G DL+++N LI +Y CG + AR+VF+ P D V++NSM
Sbjct: 134 LGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSM 193
Query: 230 IDGYVK----------------------------------NREVGFARELFDFMPERDIF 255
IDGYVK V A++LFD MPE+D+
Sbjct: 194 IDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLI 253
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WNS+I GYV G ME A LF+ MP RDVV+W M+DGYAK+G V A++ FDRM +R+
Sbjct: 254 SWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRD 313
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIH 374
VV++N ++ YV+ + + E + +F+ M + P+E +L+ VL+A A +G + IH
Sbjct: 314 VVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIH 373
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
YI + + L +L+ Y+KCG + + VF+ + K++ WN+MI G +HG GE
Sbjct: 374 LYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGE 433
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
A +M +++EKR P+D TFI VL+AC+H+G+V EG F+LM+R +KIEPK++HYGCM
Sbjct: 434 SAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCM 493
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VD+L R+G + ++ L+ ++P+E +W L+ACS H E G++VA+HL +P
Sbjct: 494 VDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNP 553
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+VLLSN+YAS G W EV +R MKE++L K G S +
Sbjct: 554 SSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWI 593
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/540 (37%), Positives = 325/540 (60%), Gaps = 11/540 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L CS++ + +IH ++ +G Q+ +++++ C ++ + FD + + D F+
Sbjct: 36 LNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFL 95
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
NT+++ + AL+ Y A N YTFP + + CA + +LREGK+VH I
Sbjct: 96 WNTLIRGYADAGPCEEALALYSNMHGAGLFPDN-YTFPFVVRSCAVLSALREGKEVHCNI 154
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR----EV 239
VK GF+ D+FV++SL+ MYS GE L VF + V ++V+W ++I GYV+NR +
Sbjct: 155 VKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGL 214
Query: 240 GFARELFDFMPERDIFTWNSMISG-----YVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
G RE+ + + T S++ ++++G + G+ L DV N +I
Sbjct: 215 GVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGI-KLGVDPDVSLTNALIAL 273
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y K GNV +AR+ FD M ++N+VSWN ++A Y + ++LF RM + ++
Sbjct: 274 YGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITM 333
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+SV++ACA++G ++ G+W+H +++ ++ +V ++ +L+ MYAKCG +DLAR VF+ +
Sbjct: 334 VSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPC 393
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
++VVSW SMI HG GE AL++F M+ G PN TF V +AC H+G+V EG +
Sbjct: 394 RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKH 453
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F+ M R Y I P VEH CMVDLLGRAG + ++ E + K+P+E ++WGALL +C HS
Sbjct: 454 FESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHS 513
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N EL ++VA+ L L+P+ YVL+SNIYA G+W++ LR++M+E+EL+K G SLV
Sbjct: 514 NLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLV 573
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 316/545 (57%), Gaps = 40/545 (7%)
Query: 53 IVDLSHPIL-QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLS 109
I L HP L Q L + + HQ H L+VSGL+ F +R+L L S S + +
Sbjct: 6 IEQLHHPSLSQALTALTATSHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHA 65
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
F P FM NTI+ + + +++FY + A N +TFP L K +
Sbjct: 66 KTIFLHTHNPSPFMFNTII---MASSRTLDSVTFYVCMLHAGHFPDN-FTFPFLIKSSSA 121
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ G ++HA +VK G + D+FV N++I +YS
Sbjct: 122 SPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYS-------------------------- 155
Query: 230 IDGYVKNREVGFARELFD-FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
RE+ AR++FD D+ +W ++I+G+ + G ++ A +FDLMP ++ VSW
Sbjct: 156 -----SFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSW 210
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N MI GYA + AR FD M R+ SW+ +++ Y + E L LF M+ GD
Sbjct: 211 NAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKM 270
Query: 349 -PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
PNEA+L+S ++ACA + ++ G+W+HSYI++ +++ +V L T LL MY KCG + A
Sbjct: 271 IPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAG 330
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ M+E+NV SWNSMI G ++G G++AL +F +M+ GP+PN TFI +L+ C+H+G+
Sbjct: 331 VFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSGL 390
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ EG W F +M ++Y I+P+++HYGCMVDLLGRAGL++++ + V K+PM+ LWGAL+
Sbjct: 391 ITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGALV 450
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H ELG+ + + L++LEP G Y LL NI+A+ +WD+V +R + K +++ K
Sbjct: 451 GACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDVAMVRDLEKGRKVLK 510
Query: 588 AVGSS 592
G++
Sbjct: 511 NPGNN 515
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/606 (35%), Positives = 325/606 (53%), Gaps = 54/606 (8%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
++P PP +P F T +L ++++CST+ E H + ++ +
Sbjct: 27 SMPLQPPS------RPSFKQT-------------LLNRIKNCSTINELHGLCASMIKTNA 67
Query: 86 SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
QD F + + +L+SV V F ++ P+ F+ N ++K F+ PF AL Y
Sbjct: 68 IQDCFLVHQFISA-SFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYV 126
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+ V YTF L K C + ++ G+ VH I K GFE LFV+ +L+ YS
Sbjct: 127 HMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKL 186
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
E+L AR++FD M ERD F W +M+S
Sbjct: 187 -EILSE------------------------------ARKVFDEMCERDAFAWTAMLSALA 215
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
VGDM++A LF+ MP R+ +WN MIDGY ++GNV SA F++M ++++SW ++
Sbjct: 216 RVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITC 275
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y + K Y + L ++ M P+E ++ +V +ACA++G +++G+ IH Y+ + D
Sbjct: 276 YSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLD 335
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
V + ++L+ MYAKCG +DL+ +F +T+KN+ WN++I G +HG EKAL MF ME+
Sbjct: 336 VYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMER 395
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
PN TFI +LSACTHAG+V EG F M R Y I P + HYGCMVD+L ++G +
Sbjct: 396 EKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLN 455
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ EL+ + E +WGALL+ C H N E+ + + LM LEP + G Y LL ++YA
Sbjct: 456 EALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYA 515
Query: 566 SEGKWDEVENLRRIMKEKELEKAV-GSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEI 623
E W EV ++R +MKEK +EK GSS + G S + P I Y +L E+
Sbjct: 516 EEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKI-YFILTEL 574
Query: 624 GAQMKM 629
Q+K+
Sbjct: 575 DGQLKL 580
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 318/562 (56%), Gaps = 40/562 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
++H +VSGL +A S+VL+ + + FD I+ P F+ N +++
Sbjct: 6 RLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQS 65
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ P A++FY + V N TFP + K CA I +L EG+++H I K G D+FV
Sbjct: 66 DAPADAIAFYKKAQGGGMVPDN-LTFPFILKACARINALNEGEQMHNHITKLGLLSDIFV 124
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY--------------------V 234
NSLIH+Y+ CG + AR VF++ V D+V+WNS+I GY V
Sbjct: 125 SNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGV 184
Query: 235 KNREVG-------------------FARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
K +V R + D+ E D++ N+++ + G +++A
Sbjct: 185 KADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEK 244
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+F M R++V+ N MI YAK ++ SAR FD++ ++++SW+ +++ Y + + +
Sbjct: 245 VFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDA 304
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L +F +M R KP+ + SV+++CA++G +D+G+W+H Y+++ IK D ++ SL+ M
Sbjct: 305 LEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDM 364
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG A VF M EK+ +SWNS+I+G +G +++L +F M G PN TF
Sbjct: 365 YMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTF 424
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL AC +A +V EG +F+ M+R+Y +EP+++HYGC+VDLLGRAG + + ++++P
Sbjct: 425 LGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMP 484
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
++ P +W LL +C+TH + + +IV + L ELEP + G Y LLSN YAS +W E N
Sbjct: 485 IDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMN 544
Query: 576 LRRIMKEKELEKAVGSSLVHPG 597
+R+ M + ++ K+ G S V
Sbjct: 545 VRQCMADTDVRKSPGCSAVEAA 566
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 173/391 (44%), Gaps = 42/391 (10%)
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCG-EVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
K++HA + G + + ++ Y++ +++ A KVF+ WN +I G +
Sbjct: 5 KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 64
Query: 236 NRE----VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA----NGLFDLMPFRDVVS 287
+ + F ++ D T+ ++ + + N + L D+
Sbjct: 65 SDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFV 124
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
N +I YA GN+ AR+ FD M +++VVSWN L+ Y +C + + L LF M
Sbjct: 125 SNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGV 184
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL--------------- 392
K ++ +++ V++AC +G + ++ YI+ I+ DV L +L
Sbjct: 185 KADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEK 244
Query: 393 ----------------LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ YAK + AR +FD + +K+++SW+SMI GY A
Sbjct: 245 VFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDA 304
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
LE+F +M++ P+ V+S+C H G + G W + ++R I+ ++D
Sbjct: 305 LEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRR-NNIKADTIMENSLID 363
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ + G +++ ++ ++ E W +++
Sbjct: 364 MYMKCGSAKEALQVFKEMK-EKDTLSWNSII 393
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/580 (36%), Positives = 333/580 (57%), Gaps = 46/580 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVL---- 111
I+Q + SC + +IH +L+ +G ++S ++++ S L+ + V
Sbjct: 16 IIQLVGSCKNSNDVGKIHARLITTGFIKNSNLTTKIVVAFADSRRPYLAEFARYVFREYH 75
Query: 112 --FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
F D F+ N ++KS DP AL ++ M+ + + ++F L+ K C+
Sbjct: 76 VCSFAPGDVKDPFLWNLVIKSHSHGVDPRRAL-LWFCLMLENGISVDKFSFSLVLKACSR 134
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ L+ G ++H + K G DLF++N LI +Y CG + AR++F+ P D V++NSM
Sbjct: 135 LGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSM 194
Query: 230 IDGYVKNREVGFARELFDFMP----------------------------------ERDIF 255
IDGY+K + ARELFD MP E+D+
Sbjct: 195 IDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLI 254
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WNS+I GYV G ME A LF +MP RDVV+W MIDGYAK+G V A+ FD+M R+
Sbjct: 255 SWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRD 314
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIH 374
VV++N ++A YV+ + + E L +F M + P+E +L+ VL+A A +G + +H
Sbjct: 315 VVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMH 374
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
YI + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE
Sbjct: 375 LYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAIHGLGE 434
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
A + +E+E+R P+ TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCM
Sbjct: 435 SAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCM 494
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VDLL R G + ++ L+ ++P+E +W L+AC+ H E+G++VA+HL+ +P
Sbjct: 495 VDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKEFEIGELVAKHLILQAGYNP 554
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+YAS G+W +V N+R +MKE++L+K G S +
Sbjct: 555 SSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWI 594
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 334/599 (55%), Gaps = 58/599 (9%)
Query: 42 KFTDTDNQR-----LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVL 96
+F+D + R IV L +++ ++ ++H L+VSGL +A S+V+
Sbjct: 830 RFSDAEQARKLLDQRKIVKLQEAVMEAVK---------KLHAHLVVSGLHNCQYAMSKVI 880
Query: 97 KKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
+ S + + F I+ P F+ NT+++ + P A+ FY +K K ++ +
Sbjct: 881 RLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFY-KKAQEKGMKPD 939
Query: 157 HYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
+ TFP + K CA + +EG+++H ++K GF LD+FV NSLI++Y+ CG + AR VF
Sbjct: 940 NLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFN 999
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-------------------------- 250
+ V D+V+WNS+I GY ++ + LF M
Sbjct: 1000 EMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSM 1059
Query: 251 -------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
E D++ N++I Y +G +++A +F M ++ V+ N MI YAK
Sbjct: 1060 ADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAK 1119
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
GN+ SA+ FD++ ++++SW+ ++ Y + + + L LF +M R KP+ + SV
Sbjct: 1120 GGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASV 1179
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
L+ACA++G +D+G+WIH Y+++ IK D ++ SL+ M+AKCG + A VF +M EK+
Sbjct: 1180 LSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDT 1239
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
+SWNS+I+G +G ++AL++F M GP PN+ TF+ VL AC + +V EG +F+
Sbjct: 1240 LSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFER 1299
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M+ ++ +EP+++HYGC+VD+L RAG + + +S++P+ P +W LL AC TH N
Sbjct: 1300 MKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVA 1359
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
+ ++ + L EL+P + +LLSNIYAS +W + N+RR + AVG S + P
Sbjct: 1360 VAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAMNVRRWTA----DNAVGESELVP 1414
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 204/338 (60%), Gaps = 1/338 (0%)
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E + ++I+ YV + A +FD MP ++VVSWN MI G+A G V AR FD+
Sbjct: 511 EFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQ 570
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RNVVSW L+ Y R Y E L L M+ G P+E ++++V+ A +N+G I +G
Sbjct: 571 MPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMG 630
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGM 429
+ ++ Y +K I D + SL+ +YAK G + + VFD M ++ N+VSW S+I G+ M
Sbjct: 631 EMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAM 690
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HG +ALE+F EM + G PN TF+ V++AC+H G+V +G +F M Y I+P+++
Sbjct: 691 HGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIK 750
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
H+GC++D+LGRAG + ++E+++ LPME +W LL CS + +G+ + + +L
Sbjct: 751 HFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDL 810
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
E G + +LSN+ G++ + E R+++ ++++ K
Sbjct: 811 ERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVK 848
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 196/412 (47%), Gaps = 56/412 (13%)
Query: 83 SGLSQDSFAASRVLKKLCTSLSSVSLS---VLFFDGIQEPDAFMCNTIMKSFLMLNDPFG 139
SGL + + S T+ SS S + FD Q P + +K++ P
Sbjct: 408 SGLRHQALSYSSTAPVPATARSSTPPSRTALKVFD--QSPAPW--RAFLKAYSHGPFPLE 463
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
AL + K + + + + F + K CAG+ R G ++HA +V+ GFE +V +LI
Sbjct: 464 ALHLF--KHARQHLADDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALI 521
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNS 259
++Y + +++ARKVF++ PV ++V+WN MI G+ EV +AR LFD MP R++ +W
Sbjct: 522 NVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTG 581
Query: 260 MISGYV-----------------------------------DVGDM---EAANGLFDLMP 281
+I GY ++G + E NG +
Sbjct: 582 LIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKG 641
Query: 282 F-RDVVSWNCMIDGYAKIGNVTSARNCFDRMC-MRNVVSWNILLALYVRCKDYCECLRLF 339
D N +ID YAKIG+V ++ FD M RN+VSW +++ + E L LF
Sbjct: 642 IMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELF 701
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
M R KPN + +SV+ AC++ G+++ G + S + + I P++ ++ M +
Sbjct: 702 AEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGR 761
Query: 399 CGVMDLARNVFDNMT-EKNVVSWNSMIMG----YGMHGQGEKALEMFMEMEK 445
G + A + + + E NV W +++G YG GE+A++M ++E+
Sbjct: 762 AGRLCEAEQIIEGLPMEVNVTVWR-ILLGCCSKYGEVAMGERAIKMISDLER 812
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 317/572 (55%), Gaps = 35/572 (6%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L ++++CST+ E H + ++ + QD F + + +L+SV V F ++ P
Sbjct: 139 LLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISA-SFALNSVHYPVFAFTQMENP 197
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ F+ N ++K F+ PF AL Y + V YTF L K C + ++ G+ V
Sbjct: 198 NVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMV 257
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H I K GFE LFV+ +L+ YS E+L
Sbjct: 258 HCHIWKKGFESHLFVQTALVDFYSKL-EILSE---------------------------- 288
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR++FD M ERD F W +M+S VGDM++A LF+ MP R+ +WN MIDGYA++G
Sbjct: 289 --ARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLG 346
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
NV SA F++M ++++SW ++ Y + K Y + L ++ M P+E ++ +V +
Sbjct: 347 NVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVAS 406
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA++G +++G+ IH Y+ + DV + ++L+ MYAKCG +DL+ +F +T+KN+
Sbjct: 407 ACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYC 466
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN++I G +HG EKAL MF ME+ PN TFI +LSACTHAG+V EG F M
Sbjct: 467 WNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMT 526
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
R Y I P + HYGCMVD+L ++G + ++ EL+ + E +WGALL+ C H N E+
Sbjct: 527 RDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIA 586
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV-GSSLVH-PG 597
+ + LM LEP + G Y LL ++YA E W EV ++R +MKEK +EK GSS + G
Sbjct: 587 EDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEG 646
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
S + P I Y +L E+ Q+K+
Sbjct: 647 TIHQFSASADSHPDSDKI-YFVLTELDGQLKL 677
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/585 (36%), Positives = 333/585 (56%), Gaps = 50/585 (8%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI-- 116
P + L +C T + +++H +L+ +GL ++ +R++ ++ +S S F
Sbjct: 17 PTIHLLGTCKTSHDLNKLHARLITTGLIKNPDLTTRIVLAFASASASASSRRPFLAEFAR 76
Query: 117 ------------QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
+ D F+ N ++KS DP AL F M+ V + ++F L
Sbjct: 77 CVFHEHHVSSSGEVEDPFLWNVVIKSHSHGVDPRKAL-FLLCLMLENGVPVDKFSFSLAL 135
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K C+ + ++EG +VH ++K G DLF++N LI +Y CG + AR+VF+ P D V
Sbjct: 136 KACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSV 195
Query: 225 TWNSMIDGYVK--------------NRE--------------------VGFARELFDFMP 250
++NSMIDGY+K RE V A +LFD MP
Sbjct: 196 SYNSMIDGYLKCGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMP 255
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E+D+ +WNSMI GYV G +E A GLFD+MP RDVV+W MIDGY K+G V A+ FD+
Sbjct: 256 EKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQ 315
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDI 369
M R+VV +N +++ V+ + + E L +F+ M + P+E SL+ VL+A A +G +
Sbjct: 316 MPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSK 375
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
+H YI + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +
Sbjct: 376 AIDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAV 435
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HG GE A +M +++E+R P+ TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++
Sbjct: 436 HGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 495
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HYGCMVD+L R+G + ++ L+ +P+E +W L+ACS H E G++VA+HL+
Sbjct: 496 HYGCMVDILARSGSIELAKNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 555
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+P YVLLSN+YAS G W +V +R +MKEK +EK G S +
Sbjct: 556 AGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWI 600
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 319/549 (58%), Gaps = 29/549 (5%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++S + + QIH +LLV GL F ++++ +S ++ + FD + P F
Sbjct: 28 IDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHA-SSSYGDITFARQVFDDLPRPQVFP 86
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N I++ + N+ F Y KM V + +TFP L K C G+ L+ G+ VHA++
Sbjct: 87 WNAIIRGY-SRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQV 145
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD--LVTWNSMIDGYVKNREVGF 241
+ GFE D+FV+N LI +Y+ C + AR VFE P+ + +V+W +++ Y +N E
Sbjct: 146 FRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVE 205
Query: 242 ARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLF------------DLMPFRDV 285
A E+F M + D+ S+++ + + D+E + DL+
Sbjct: 206 ALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLL----- 260
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
+S N M YAK G V +A+ FD+M N++ WN +++ Y + + + LF MI
Sbjct: 261 ISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINK 317
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
D +P+ S+ S ++ACA +G ++ +W+ Y+ + + DV +S++L+ M+AKCG ++ A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECA 377
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
R+VFD +++VV W++MI+GYG+HGQ +A+ ++ ME+ G PND TF+ +L AC H+
Sbjct: 378 RSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHS 437
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
GMV EGWW+F+ M +KI P+ +HY C++DLLGRAG + + E++ +P++ G +WGA
Sbjct: 438 GMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LLSAC H + ELGK AQ L ++P + G YV LSN+YA+ WD V +R MKEK L
Sbjct: 497 LLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 586 EKAVGSSLV 594
K VG S V
Sbjct: 557 NKDVGCSWV 565
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/616 (33%), Positives = 335/616 (54%), Gaps = 47/616 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS------VSLSV 110
S +L+ L C +++ QIH L+V G S S AS+++ CT LS+ + +
Sbjct: 10 SRHVLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCT-LSAGDRDGGLCHAR 68
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD I EPD FM NT+++++ + P AL + ++ + + N +T P + K C +
Sbjct: 69 RLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLH-RGVLQRGILPNEFTLPFVLKACTTV 127
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
R++ H +VK GF +FV N+L+H ++ G + D+R+ F + ++V+WN+MI
Sbjct: 128 RAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMI 187
Query: 231 DGYVKNREVGFARELFDFMPER----DIFTW----------------------------- 257
GY + EV A LF M + D+FT
Sbjct: 188 GGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSR 247
Query: 258 ------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
N+++ Y GD+ A+ FD+MP ++VV+W M+ AK G+V + R+ F++M
Sbjct: 248 VDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQM 307
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
RN+VSWN +++ YV+C E L L++RM P+E +L VL+AC G + G+
Sbjct: 308 PERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGK 367
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
IH Y++ P V L SLL MYA+CG +D A +F M KNV+SWN +I MHG
Sbjct: 368 MIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHG 427
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ ++ + F M +P++ TF+ +LSAC+H G++ G +YF+ M R+Y +EP+VEHY
Sbjct: 428 RAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHY 487
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCMVDLLGR G + + L+ + ++ +WGALL AC H N E+GK+V + L+ELE
Sbjct: 488 GCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEG 547
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH 611
G +VL+ N++ +W++++ LR++MKE+ +K +G S + E VE+
Sbjct: 548 ITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRHE 607
Query: 612 RKCIVYSMLGEIGAQM 627
+Y+ + ++ +
Sbjct: 608 STNEIYAAVDQLSYHL 623
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 331/578 (57%), Gaps = 48/578 (8%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS--------LSSVSLSVLFFDG 115
L SC T + +++H +L+ +GL ++ +R++ ++ L+ + V
Sbjct: 2 LGSCKTSHDLNKLHARLITTGLIKNPDLTTRIVLAFASASASSRRPFLAEFARCVFHEHH 61
Query: 116 IQEP----DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
+ D F+ N ++KS DP AL F M+ V + ++ L K C+ +
Sbjct: 62 VSSSGEVEDPFLWNVVIKSHSHGVDPRKAL-FLLCLMLESSVPVDKFSLSLALKACSRLG 120
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++EG +VH ++K G DLF++N LI +Y CG + AR+VF+ P D V++NSMID
Sbjct: 121 FVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMID 180
Query: 232 GYVK------------------------NREVG----------FARELFDFMPERDIFTW 257
GYVK N +G A +LFD MPE+D+ +W
Sbjct: 181 GYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEKDLISW 240
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
NSMI GYV G +E A GLF++MP RDVV+W MIDGY K+G V A+ FD+M R+VV
Sbjct: 241 NSMIGGYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVV 300
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
++N +++ YV+ + + E L +F+ M + P+E SL+ VL+A A +G + +H Y
Sbjct: 301 AYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLY 360
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE A
Sbjct: 361 IVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESA 420
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+M ++E+R P+ TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMVD
Sbjct: 421 FDMLFQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 480
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
+L R+G ++ + L+ +P+E +W L+ACS H E G++VA+HL+ +P
Sbjct: 481 ILARSGSIKLARNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILXGGYNPSS 540
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+YAS G W +V +R +MKEK +EK G S +
Sbjct: 541 YVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWI 578
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 231/626 (36%), Positives = 342/626 (54%), Gaps = 50/626 (7%)
Query: 40 KPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL 99
KPK+ N V +S+P L L+SCS++ + QI + +GL F ASR+L
Sbjct: 40 KPKWNSLSN-----VFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFC 94
Query: 100 CTSLSS-VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
S S + + L FD + P+ F NT++K + N P SF+ +M+ E +
Sbjct: 95 ALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFF-RQMIRNRAEFDSG 153
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
+F K C G VH+ I K GF+ DLFV+N LI Y G + AR++F++
Sbjct: 154 SFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDES 213
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI------------------------ 254
V D+VTW +MI+GY +N + A LF+ M D+
Sbjct: 214 SVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGK 273
Query: 255 ---------------FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
N+M+ YV G + A +F+ M RDV SW +++GYAK G
Sbjct: 274 TLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNG 333
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG-DAKPNEASLMSVL 358
++ SAR FD M RN+VSWN ++A Y + E L LF M+ P E +L+ VL
Sbjct: 334 DLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVL 393
Query: 359 TACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+A +G +++GQ IH +++ K I+ ++L +++ MYAKCG +D A +F +M EKN+
Sbjct: 394 SASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNL 453
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
VSWNSMI Y +G +KAL +F +M G P+ TFI VLSAC++ G V EG +F+
Sbjct: 454 VSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFES 513
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M+ + +EPK EHY CMVDLL R GL++++ EL+S++PMEA WGALL AC H N E
Sbjct: 514 MENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVE 573
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-P 596
+ K+ + L+EL+P D G Y LL+NI A KW +V +RR+M+E+ ++K G SL+
Sbjct: 574 MAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIE 633
Query: 597 GEFASESIVENCPPHRKCIVYSMLGE 622
G+F E +V + R +Y ++ E
Sbjct: 634 GKF-HEFLVADTSHTRSSEIYRVVNE 658
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/613 (35%), Positives = 334/613 (54%), Gaps = 55/613 (8%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFF- 113
+HP L L T+ + +QIH++L+ +G + +R++ +S V + F
Sbjct: 70 THPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFM 129
Query: 114 ------DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
++ + F+ N I+KSF DP A + M+ V + ++F L+ K C
Sbjct: 130 SRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIF-NLMLENGVCVDKFSFSLVLKAC 188
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
+ + ++EG ++H + D+F++N L+ +Y CG + AR++F+ D V++N
Sbjct: 189 SRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFN 248
Query: 228 SMIDGYVKNREVGFARELFDFMP----------------------------------ERD 253
SMIDGYVK+ V ARELFD MP +RD
Sbjct: 249 SMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRD 308
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+ +WNSMI G V G ME A+ LF+ MP RDVVSW M+DGYAK+G + AR FD M
Sbjct: 309 LISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPE 368
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQW 372
R+V+S N ++A YV+ E L F M+ + P A+L+ L+A A +G D G
Sbjct: 369 RDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVA 428
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H YI+ L +L+ MYAKCG +D A + WN++J G +HG
Sbjct: 429 LHCYIEDNGFSLSEKLGXALIDMYAKCGSIDNAL----------IDHWNAIJXGLAIHGL 478
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
GE A E+FMEMEK PBD TFI VL+AC HAG+V EG F LM+ ++K+EPK++HYG
Sbjct: 479 GEVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYG 538
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVD+LGRAG + + ++ V K+P+E +W LLSAC H N +G+ VA+HL+ ++
Sbjct: 539 CMVDILGRAGHVEEXKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSY 598
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+P YVLLSNIYA G W++V +R +MK+++L+K G S + E V + +
Sbjct: 599 NPSSYVLLSNIYAXFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 658
Query: 613 KCIVYSMLGEIGA 625
+ + ++ E+G
Sbjct: 659 RLPIVNISAELGT 671
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/517 (38%), Positives = 296/517 (57%), Gaps = 34/517 (6%)
Query: 80 LLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPF 138
++V G + ++ A ++ ++S +++ + F I EPD FM NT+++ P
Sbjct: 1 MIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPL 60
Query: 139 GALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSL 198
A+S Y +M V + +TFP + K C + ++ G VH R+ + GFE + FVRN+L
Sbjct: 61 NAISLY-SQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTL 119
Query: 199 IHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWN 258
I+ ++ CG++ AR LFD +RD+ W+
Sbjct: 120 IYFHANCGDL-------------------------------AVARALFDGSAKRDVVAWS 148
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
++ +GY G++ A LFD MP +D+VSWN MI GYAK G + SAR FD + R+VV+
Sbjct: 149 ALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVT 208
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
WN ++A YV C + L +F+ M P+E +++S+L+AC ++G +D GQ IH I
Sbjct: 209 WNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCIS 268
Query: 379 KCRIKP-DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ + VLL +L+ MYAKCG + A VF M EK+V +WNS++ G HG EK++
Sbjct: 269 EMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSI 328
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
+F EM K P++ TF+ VL AC+HAG V EG YFDLM+ Y IEP + HYGCMVDL
Sbjct: 329 HLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDL 388
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAGL+ ++ + + + +E +W LL AC H N ELG+ L+++ + G Y
Sbjct: 389 LGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDY 448
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
VLLSNIYAS G+WD VE +R++M + + K G SL+
Sbjct: 449 VLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLI 485
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 333/592 (56%), Gaps = 42/592 (7%)
Query: 42 KFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT 101
+F+D + R +VD + + + + ++ ++H +VSGL +A S+VL+
Sbjct: 440 RFSDAEIVR-KLVDQRNSV-KSFFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAI 497
Query: 102 SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
+ + FD I+ P F+ N +++ + P A++FY + V N TFP
Sbjct: 498 LQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDN-LTFP 556
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
+ K CA I +L EG+++H I K G D+FV NSLIH+Y+ CG + AR VF++ V
Sbjct: 557 FILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK 616
Query: 222 DLVTWNSMIDGY--------------------VKNREVG-------------------FA 242
D+V+WNS+I GY VK +V
Sbjct: 617 DVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMV 676
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
R + D+ E D++ N+++ + G +++A +F M R++V+ N MI YAK ++
Sbjct: 677 RYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIV 736
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
SAR FD++ ++++SW+ +++ Y + + + L +F +M R KP+ + SV+++CA
Sbjct: 737 SARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCA 796
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
++G +D+G+W+H Y+++ IK D ++ SL+ MY KCG A VF M EK+ +SWNS
Sbjct: 797 HLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNS 856
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I+G +G +++L +F M G PN TF+ VL AC +A +V EG +F+ M+R+Y
Sbjct: 857 IIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLY 916
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
+EP+++HYGC+VDLLGRAG + + ++++P++ P +W LL +C+TH + + +IV
Sbjct: 917 SLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIV 976
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ L ELEP + G Y LLSN YAS +W E N+R+ M + ++ K+ G S V
Sbjct: 977 TKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAV 1028
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 207/347 (59%), Gaps = 5/347 (1%)
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
R+ F+F + ++++ Y+ G + + F+ MP ++ VSWN +I G+A G V
Sbjct: 117 RKGFEF----QTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVE 172
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR F+RM RNVVSW+ ++ Y R E + LF RM+ P+E ++++V+ A +
Sbjct: 173 YARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPALS 232
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWN 421
N+G I IG+ +H Y +K + DV + SL+ +YAK G + + VFD M ++ N+VSW
Sbjct: 233 NVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWT 292
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
S+I G+ MHG KA+E+F +M + G PN TF+ VL AC+H G+V +G +F M
Sbjct: 293 SIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYE 352
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y I P V+H+GC++D+LGRAG +R++E+++ P+E +W LL CS + E+G+
Sbjct: 353 YNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGER 412
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
+ ++ LE G +V+LSN+ ++ + E +R+++ ++ K+
Sbjct: 413 TMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKS 459
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 155/333 (46%), Gaps = 45/333 (13%)
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
Y F K CAG+ R ++H +V+ GFE +V +L+++Y +CG + D+R FE+
Sbjct: 90 YAFTFALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEE 149
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF 277
PV + V+WN +I G+ EV +AR LF+ MP R++ +W+ MI GY A LF
Sbjct: 150 MPVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALF 209
Query: 278 DLMPFR---------------------------------------DVVSWNCMIDGYAKI 298
M DV N +ID YAKI
Sbjct: 210 RRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKI 269
Query: 299 GNVTSARNCFDRMC-MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G++ ++ FD M RN+VSW +++ + + + LF M R +PN + +SV
Sbjct: 270 GSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSV 329
Query: 358 LTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF-DNMTEK 415
L AC++ G+++ G + S I + I PDV ++ M + G + A + D E
Sbjct: 330 LHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEV 389
Query: 416 NVVSWNSMI---MGYGMHGQGEKALEMFMEMEK 445
N W +++ YG GE+ ++ + +E+
Sbjct: 390 NATVWRTLLGCCSKYGEVEMGERTMKKILALER 422
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 140/370 (37%), Gaps = 50/370 (13%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ +MMA+ + + T + + + + G+ +H K G D+ V NSLI +Y+
Sbjct: 209 FRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAK 268
Query: 205 CGEVLDARKVFEDG-PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
G + ++ +VF++ +LV+W S+I G+ + A ELF M I T+ S
Sbjct: 269 IGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLS 328
Query: 260 MISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSARNCF-DRMCM 313
++ G +E F M + DV + C+ID + G + A D
Sbjct: 329 VLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVE 388
Query: 314 RNVVSWNILLALYVRCKDYCEC---------LRLFDRMIRGDAKPNEASLMSVLTACANM 364
N W LL C Y E + +R GD L ++LT
Sbjct: 389 VNATVWRTLLGC---CSKYGEVEMGERTMKKILALEREFGGDF----VVLSNMLTELRRF 441
Query: 365 G-------VIDIGQWIHSYIQKCRIKPDVLLSTSLLT------MYAKCGVM--------D 403
++D + S+ R++ L + YA V+ D
Sbjct: 442 SDAEIVRKLVDQRNSVKSFFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPD 501
Query: 404 L--ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
L A VFD + WN +I G A+ + + + G P++ TF +L A
Sbjct: 502 LVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKA 561
Query: 462 CTHAGMVLEG 471
C + EG
Sbjct: 562 CARINALNEG 571
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 105/264 (39%), Gaps = 37/264 (14%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A FDR W+ LL Y + L+LF R R A + + L ACA
Sbjct: 47 AHQVFDR----RPTPWHALLKAYSHGPHPQDALQLF-RHARWHAADDTYAFTFALKACAG 101
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G +H + + + + T+L+ +Y CG + +R F+ M KN VSWN +
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVV 161
Query: 424 IMGYGMHGQGE-------------------------------KALEMFMEMEKRGPTPND 452
I G+ G+ E +A+ +F M G +P++
Sbjct: 162 ITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSE 221
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
T + V+ A ++ G +L G ++ + V ++DL + G +++S +
Sbjct: 222 ITVLAVVPALSNVGKILIGEALHGYCEK-EGLVWDVRVGNSLIDLYAKIGSIQNSLRVFD 280
Query: 513 KLPMEAGPALWGALLSACSTHSNS 536
++ W +++S + H S
Sbjct: 281 EMLDRRNLVSWTSIISGFAMHGLS 304
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 333/583 (57%), Gaps = 50/583 (8%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV------------ 106
P +Q L +C T ++ +IH + +G +++ +R++ S S
Sbjct: 16 PTIQLLGTCKTSEDVSKIHARKGTTGFIKNTNLTTRIVLAFAASRRSYLAEFARCVFHEY 75
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+S +++P F+ N ++KS +P AL ++ M+ V + ++ L+ K
Sbjct: 76 HVSSXXSGNVEDP--FLWNAVIKSHSHGVEPRKALLLFF-LMLKNGVSVDKFSLSLVLKA 132
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + ++EG + H + K G DLF++N LI +Y CG + AR+VF+ D V++
Sbjct: 133 CSRLGFVKEGMQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSY 192
Query: 227 NSMIDGYVKNREVGFARELFDFMP----------------------------------ER 252
NSMIDGYVK + ARELFD MP E+
Sbjct: 193 NSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEK 252
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+ +WNS+I GYV G +E A LFD MP RDVV+W M+DGYAK+G V A++ FD+M
Sbjct: 253 DLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMP 312
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQ 371
R+VV++N ++A YV+ + + E + +F+ M + P+E +L+ VL+A A +G +
Sbjct: 313 QRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 372
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+H Y + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG
Sbjct: 373 DMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHG 432
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
GE A +M +++E+R P+D TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HY
Sbjct: 433 LGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHY 492
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCMVD+L R+G + ++ L+ ++P+E +W L+ACS H E G++VA+HL+
Sbjct: 493 GCMVDILSRSGRIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAG 552
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+P YVLLSN+YAS G W EV +R +MKE++++K G S +
Sbjct: 553 YNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKIQKIPGCSWI 595
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 332/615 (53%), Gaps = 48/615 (7%)
Query: 57 SHPILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
+H L L + CS++K +H Q+++ GL+ ++L LC + + L FD
Sbjct: 38 THQTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLS-LCVQEGDLRYAHLLFDQ 96
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I +P+ FM N +++ + NDP +L + +M++ N +TFP + K CA E
Sbjct: 97 IPQPNKFMYNHLIRGYSNSNDPMKSL-LLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWE 155
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
VHA+ +K G V+N+++ Y C +L AR+VF+D +V+WNSMI GY K
Sbjct: 156 AVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSK 215
Query: 236 ----NREVGFARELFDFMPERDIFTW---------------------------------- 257
+ + +E+ E D+FT
Sbjct: 216 MGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIV 275
Query: 258 -NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
N++I Y G ++ A +FD M +DVVSW M++ YA G V +A F+ M ++NV
Sbjct: 276 TNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNV 335
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSWN ++ V+ Y E + LF RM P++A+L+S+L+ C+N G + +G+ H Y
Sbjct: 336 VSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCY 395
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I I V L SL+ MYAKCG + A ++F M EKNVVSWN +I +HG GE+A
Sbjct: 396 ICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEA 455
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+EMF M+ G P++ TF +LSAC+H+G+V G +YFD+M ++I P VEHY CMVD
Sbjct: 456 IEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVD 515
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGR G + ++ L+ K+P++ +WGALL AC + N E+ K + + L+EL + G
Sbjct: 516 LLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGL 575
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI- 615
YVLLSN+Y+ +WD+++ +R+IM + ++K S + + +V++ R C
Sbjct: 576 YVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDD---KRHCAS 632
Query: 616 --VYSMLGEIGAQMK 628
+YS+L ++ +K
Sbjct: 633 TGIYSILDQLMDHLK 647
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/579 (36%), Positives = 334/579 (57%), Gaps = 46/579 (7%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVLF---- 112
+Q L SC T + ++IH L+ +G+ ++S +R++ S L+ + V
Sbjct: 9 IQVLGSCKTSYDVNKIHGGLIKTGIIKNSNLTTRIVLAFAASRRPYLAEFARCVFHEYHV 68
Query: 113 --FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
F + D F+ N ++KS DP AL + M+ V + ++ L+ K C+ +
Sbjct: 69 CSFSPGEMEDPFLWNAVIKSHSHGKDPRQAL-LLFCLMLENGVSVDKFSLSLVLKACSRL 127
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
++ G ++H + K G DLF++N LI +Y CG + AR++F+ P D V++NSMI
Sbjct: 128 GFVKGGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMI 187
Query: 231 DGYVKNREVGFARELFDFMP----------------------------------ERDIFT 256
+GYVK + ARELFD MP E+D+ +
Sbjct: 188 NGYVKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLIS 247
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WNSMI GYV G +E A GLFD+MP RDVV+ MIDGYAK+G V A+ FD+M +R+V
Sbjct: 248 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDV 307
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V++N ++A YV+ K + E L +F+ M + P+E +L+ +L+A A +G + +H
Sbjct: 308 VAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHL 367
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
YI + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE
Sbjct: 368 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVHGLGES 427
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A M +++E+ P+D TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMV
Sbjct: 428 AFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 487
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L R+G + ++ L+ ++P+E +W L+ACS H E G++VA+HL+ +P
Sbjct: 488 DILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS 547
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+YAS G W +V +R +MKE+++EK G S +
Sbjct: 548 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 312/536 (58%), Gaps = 42/536 (7%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL-----FFDGIQEP 119
+ C+ + Q+H L+V+GL+ + + VL++L + V + F I +P
Sbjct: 21 QKCTNFRSLKQLHAFLIVNGLN----STTSVLRELIFVSAIVVSGTMDYAHQLFAQISQP 76
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D FM NT+++ P A+S Y + M + V + +TF + K C + ++ G +
Sbjct: 77 DIFMWNTMIRGSAQTLKPATAVSLYTQ-MENRGVRPDKFTFSFVLKACTKLSWVKLGFGI 135
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +++K GF+ + FVRN+LI+ ++ CG DL T
Sbjct: 136 HGKVLKSGFQSNTFVRNTLIYFHANCG---------------DLAT-------------- 166
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR LFD +R++ W+++ +GY G ++ A LFD MP +D+VSWN MI YAK G
Sbjct: 167 --ARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHG 224
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR FD + ++VV+WN ++A YV + E L +FD M +P++ +++S+L+
Sbjct: 225 EMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILS 284
Query: 360 ACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
A A++G ++IG+ IH S C VLLS +L+ MYAKCG + A VF M +K+
Sbjct: 285 ASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTS 344
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SWNS+I G +HG E+++ +F EM + PN+ TF+ VL AC+HAG V EG YF+LM
Sbjct: 345 SWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLM 404
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ ++KIEP ++HYGCMVD+LGRAGL+ ++ + + + +E +W LL AC H + EL
Sbjct: 405 KNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVEL 464
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G+ + L+++ + G YVLLSNIYAS+G+WD V+ +R++M + ++K VG SL+
Sbjct: 465 GRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLI 520
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 341/586 (58%), Gaps = 20/586 (3%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD---GI- 116
L L+ T QIH +L + L + + K + SS++L +D GI
Sbjct: 156 LSLLQQSKTRANLLQIHAFMLRNALETNP----NLFTKFIATCSSIALLAPLYDPLAGIV 211
Query: 117 ----------QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
DAF+CN+++K+++ + + + Y + + +TF +L K
Sbjct: 212 HARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKS 271
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA ++ EG+++H+ +V GF LDL+ +L+ MY+ G++ ARK+F++ V+W
Sbjct: 272 CALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSW 331
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
++I GYV++ ++ A +LFD M E+D +N+MI YV +GDM +A LFD MP R VV
Sbjct: 332 TALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVV 391
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
SW MI GY+ GN+ SAR+ FD M +N+ SWN +++ Y + K E L+LF M
Sbjct: 392 SWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTT 451
Query: 347 A-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+ +P+E +++SVL A A++G +D+G W+H ++++ ++ + T+L+ MYAKCG + +
Sbjct: 452 SLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKS 511
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
R VFDNM EK SWN++I + ++G+ ++AL +FMEM +G PN+ T I VLSAC H+
Sbjct: 512 RGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHS 571
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V EG +F M+ + + PK+EHYGCMVDLLGRAG ++++E+L+ +P EA + +
Sbjct: 572 GLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSS 630
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
L AC + + V + +++E + G Y++L N+YA+E +W E + ++ +M+ +
Sbjct: 631 FLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGV 690
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCR 631
+K G S + E + + + ++S+LG++ MK R
Sbjct: 691 KKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVHMKGTR 736
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/611 (32%), Positives = 331/611 (54%), Gaps = 40/611 (6%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
H + L S +++ Q+H Q+L S L + + +++ C SS+ ++ F+ I
Sbjct: 24 HTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIP 83
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+P+ +CN ++ +P L YE+M + + + ++FP L K + ++SL EG
Sbjct: 84 KPETHLCNRFLRELSRSEEPEKTL-LVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGL 142
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY---- 233
++H K GF+ D FV+ L+ MY+ CG + +AR +F+ D+VTW+ MIDGY
Sbjct: 143 EIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSG 202
Query: 234 -----------VKNREV--------------------GFARELFDFMPERDIFT----WN 258
+KN V + + + DF+ E +I +
Sbjct: 203 LFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQS 262
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
++++ Y G M+ A LF+ M +++V+ M+ GY+K+G + +AR+ F++M +++V
Sbjct: 263 ALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVC 322
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W+ +++ Y E L LF+ M KP++ +++SV+TACA++G +D +WIH ++
Sbjct: 323 WSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVD 382
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K + ++ +L+ MYAKCG ++ AR +FD M KNV+SW MI + MHG AL
Sbjct: 383 KNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALR 442
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
F +ME PN TF+ VL AC+HAG+V EG F M + I PK HYGCMVDL
Sbjct: 443 FFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLF 502
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
GRA L+R++ ELV +P+ +WG+L++AC H ELG+ A+ L+EL+P G +V
Sbjct: 503 GRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHV 562
Query: 559 LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYS 618
LSNIYA +W++V +R++MK K + K G S E +V + +Y
Sbjct: 563 FLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYE 622
Query: 619 MLGEIGAQMKM 629
L E+ +++K+
Sbjct: 623 KLYEVVSKLKL 633
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 317/543 (58%), Gaps = 39/543 (7%)
Query: 89 SFAASR--VLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYE 146
+FAASR L + + S F G E D F+ N ++KS DP AL ++
Sbjct: 28 AFAASRRPYLAEFARCVFQNYHSCSFAHGEVE-DPFLWNAVIKSHSHGVDPKRAL-IWFC 85
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
M+ V + ++ L+ K C+ + ++EG ++H + K G DLF++N LI +Y CG
Sbjct: 86 LMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCG 145
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP---------------- 250
+ AR++F+ P D V++NSMIDGYVK +G ARELFD MP
Sbjct: 146 CLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGY 205
Query: 251 ------------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
E+D+ +WNS+I GYV G ME A LF +MP RDVV+W MI
Sbjct: 206 AQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMI 265
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNE 351
DGYAK+G V A+ FD+M R+VV++N ++A YV+ K E L +F M + P+E
Sbjct: 266 DGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDE 325
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+L+ VL+A A +G + +H YI + + L +L+ MY+KCG + A VF+
Sbjct: 326 TTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFER 385
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ K++ WN+MI G +HG GE A +M +E+E+R P+D TF+ +L+AC+H+G+V EG
Sbjct: 386 IENKSIDHWNAMIGGLAIHGLGESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEG 445
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F+LM+R +KIEP+++HYGCMVD+L R+G + ++ L+ ++PME +W L+ACS
Sbjct: 446 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACS 505
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H E G++VA+HL+ +P YVLLSN+YAS G W + +R +MKE+EL+K G
Sbjct: 506 HHKEFETGEVVAKHLILQAGYNPSSYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGC 565
Query: 592 SLV 594
S +
Sbjct: 566 SWI 568
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 332/583 (56%), Gaps = 49/583 (8%)
Query: 48 NQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSV 106
+Q P+ + +P L E+C ++ QIH++ + +G+ + +++L C+ +
Sbjct: 7 SQSSPVTE--NPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDM 64
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+ FD I EP F N + K + + P +S Y E M+ + V+ + YT+P L K
Sbjct: 65 CYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLE-MLERNVKPDCYTYPFLFKG 123
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
+L+ G+++H +VK G + ++F N+LI+MYS+CG + AR +F+ D+VTW
Sbjct: 124 FTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTW 183
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
N+MI GY NR ++D+ +W ++++G+V+ G ++AA F MP RD V
Sbjct: 184 NAMISGY--NR------------IKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHV 229
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
SW MIDGY ++ NC Y E L LF M
Sbjct: 230 SWTAMIDGYLRL-------NC------------------------YKEALMLFREMQTSK 258
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KP+E +++SVLTACA +G +++G+WI +YI K ++K D + +L+ MY KCG +++A
Sbjct: 259 IKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMAL 318
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
++F+ + +++ +W +M++G ++G GE+AL MF +M K TP++ T++ VLSACTH G
Sbjct: 319 SIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTG 378
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
MV EG +F M + IEP + HYGCMVDLLG+AG ++++ E++ +PM+ +WGAL
Sbjct: 379 MVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGAL 438
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
L AC H ++E+ + + ++ELEP + YVL NIYA+ KWD++ LR++M ++ ++
Sbjct: 439 LGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIK 498
Query: 587 KAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
K G SL+ E + + + +Y L ++ + +K+
Sbjct: 499 KTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKI 541
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 314/536 (58%), Gaps = 21/536 (3%)
Query: 77 HTQLLVSGLSQD-SFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
HT SG S+ S A VL++ ++ + +L+ LF + + + F N+++
Sbjct: 74 HTAFQFSGFSKRRSICAGAVLRRRYSN--NPNLTTLFNKYVDKTNVFSWNSVIAELARSG 131
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
D AL + M ++ N TFP K C+ + L G++ H + + GFE DLFV
Sbjct: 132 DSVEALR-AFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVS 190
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF-DFMPER-- 252
++L+ MYS CGE+ DAR +F++ ++V+W SMI GYV+N + A LF +F+ E
Sbjct: 191 SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESG 250
Query: 253 ---------DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIG 299
D S++S V + G+ + R D+ N ++D YAK G
Sbjct: 251 SEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCG 310
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVL 358
+ +R FD M R+V+SWN ++A+Y + E + +F RM++ G+ N +L +VL
Sbjct: 311 ELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 370
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
ACA+ G +G+ IH + K ++ +V + TS++ MY KCG +++AR FD M EKNV
Sbjct: 371 LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 430
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW++M+ GYGMHG ++ALE+F EM G PN TF+ VL+AC+HAG++ EGW +F M
Sbjct: 431 SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 490
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ +EP VEHYGCMVDLLGRAG ++++ +L+ + + +WGALL AC H N +L
Sbjct: 491 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDL 550
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G+I A+ L EL+P++ G YVLLSNIYA G+W++VE +R +MK L K G SLV
Sbjct: 551 GEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLV 606
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 325/577 (56%), Gaps = 28/577 (4%)
Query: 39 PKPKFTDTDNQRL---PIVDLSH--PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAAS 93
P P++ +RL + L H P L L+ ++H QLL GL D AAS
Sbjct: 10 PAPRWAAPSQRRLVEQHLASLPHGLPRLHHLQ---------ELHAQLLKHGLHLDPVAAS 60
Query: 94 RVLKKLCTSLSSVSLSVLFFDGIQEPDA--FMCNTIMKSFLMLNDPFGALSFYYEKMMAK 151
++L + S F P A F+ NT+++++ + P A++ + +
Sbjct: 61 KLLSSYALH-RRLPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVF-----SA 114
Query: 152 FVEHNHYTFPLLGKV--CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL 209
+ +T+ L K AG+ LR VH+ +VK G D +V N+LI YS G
Sbjct: 115 MPHRDSFTYSFLIKALSSAGVAPLR---AVHSHVVKLGSIEDTYVGNALIDAYSKNGGFS 171
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD 269
DA KVFE+ P D+V+WNS + V+ EV AR +FD M E+D +WN+++ GY GD
Sbjct: 172 DASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGD 231
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+E A LF MP R+VVSW+ ++ GY K G++ AR FD+M +N+V+W I+++ +
Sbjct: 232 VEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQN 291
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
E +LF +M + + A+++S+L ACA G + +G+ IH Y++ ++ +
Sbjct: 292 GLVEEAGKLFTQMKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVC 351
Query: 390 TSLLTMYAKCGVMDLARNVFDN-MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+L+ M+ KCG ++ A VFD + EK+ VSWN++I G+ MHG G+KAL+ F +M+ +G
Sbjct: 352 NALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGF 411
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P+ T I VLSACTH G V EG YF M+R Y + P++EHYGCM+DLLGR GL++++
Sbjct: 412 CPDAVTMINVLSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAV 471
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+L+ +P + +WG+LLSAC H N E +I L +L+P + G Y +LS+IYA G
Sbjct: 472 DLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAG 531
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
KW ++ R MK +K+ GSS + E E V
Sbjct: 532 KWSDMAKARMQMKGTGSQKSSGSSWIELDEAFHEFTV 568
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 316/574 (55%), Gaps = 35/574 (6%)
Query: 29 KTPPKLWANEPKPKFTDTDNQRLPIVD--LSHPILQKLESCSTVKEFHQIHTQLLVSGLS 86
K KL + P NQR ++ + I +K + C ++ QIH + SG+
Sbjct: 142 KAAEKLLIDSYGPTVITQTNQRRRRMNALFAWKITRKDQYCKNLRALTQIHGFFIKSGVD 201
Query: 87 QDSFAASRVLKKLCTSLS-SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
DS+ +++ S+S ++ + EPDAFM NT+++ + ++P +++ +
Sbjct: 202 TDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFV 261
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
E M F+ + ++F + K A RSLR G ++H + +K G + LFV +LI MY C
Sbjct: 262 EMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGEC 321
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G V GFAR++FD MP+ ++ WN++++
Sbjct: 322 GCV-------------------------------GFARKVFDEMPQPNLVAWNAVVTACF 350
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
D+ A +FD M R+ SWN M+ GY K G + A+ F M R+ VSW+ ++
Sbjct: 351 RGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVG 410
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ + E F ++R + +PNE SL VL+AC+ G + G+ +H +++K
Sbjct: 411 FSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWI 470
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEME 444
V ++ +L+ MY++CG + +AR VF+ M EK ++VSW SMI G MHG GE+A+ +F EM
Sbjct: 471 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMT 530
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
+ G P++ +FI +L AC+HAG++ EG YF M+R+Y IEP VEHYGCMVDL GR+G +
Sbjct: 531 ESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKL 590
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
+ + + ++P+ +W LL ACS+H N EL + V Q L EL+P + G VLLSN+Y
Sbjct: 591 QKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVY 650
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
A+ GKW +V ++R+ M + ++K SLV G+
Sbjct: 651 ATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGK 684
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 336/582 (57%), Gaps = 18/582 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L + C T++ QIH L+ SGL D F S+V + + V + FD + +
Sbjct: 8 LLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYA---FDFLNQT 64
Query: 120 DAFMC----NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
D + NT++ ++ P A Y + FV + YTFP++ K C ++E
Sbjct: 65 DLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVP-DMYTFPVVLKACTKFLGVQE 123
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G++VH VK GF DL+V+NSL+H YSVCG+ A +VF++ V D+V+W +I GYV+
Sbjct: 124 GEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVR 183
Query: 236 NREVGFARELF---DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSW 288
A LF D +P ++ T+ S++ +G + G+ L+ R +V
Sbjct: 184 TGLFDEAINLFLKMDVVP--NVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVG 241
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++D Y K + AR FD + R++VSW +++ V+CK + L LF M +
Sbjct: 242 NALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVE 301
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ L SVL+ACA++G +D G+W+ YI++ I+ D+ + T+L+ MYAKCG +++A ++
Sbjct: 302 PDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHI 361
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ + +N+ +WN+++ G MHG G +AL+ F M G PN+ TF+ +L+AC H+G+V
Sbjct: 362 FNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLV 421
Query: 469 LEGWWYF-DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
EG YF ++ + + P++EHYGCM+DLL RAGL+ ++ + + +P+ +WGALL
Sbjct: 422 AEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALL 481
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SAC + N EL + + HL+EL+ +D G YVLLSNIYA+ +WD+V +RR+MK+K + K
Sbjct: 482 SACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRK 541
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
GSS++ A E +V + R ++ +L + Q+ +
Sbjct: 542 FPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQVYL 583
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/643 (34%), Positives = 328/643 (51%), Gaps = 114/643 (17%)
Query: 63 KLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL-------SVLFFDG 115
+L C + + QIH Q L SGL D++AASR+L TS ++ L S+ F
Sbjct: 10 QLSRCCSARHLLQIHAQFLASGLLADAYAASRLLL-FTTSATAARLLPHPLHHSLQLFGL 68
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
++ P+AF CNT++K+ L P Y A + YT PLL CA +RE
Sbjct: 69 VRSPNAFTCNTLLKAALRQGFPHLCFPLYASMPAAP----DTYTHPLLAAACAARGDVRE 124
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G +VH+ VK GF +L++RN+L+HMYS CG V AR+VF+ GPVWD V+WN+++ YV+
Sbjct: 125 GLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVR 184
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
+ +V A ++F MPER ++M++ + G +E A G+FD RD +W M+ +
Sbjct: 185 DGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCF 244
Query: 296 AKIGNVTSARNCF----------DRMCMRNVVS--------------------------- 318
+ A F D M +VV+
Sbjct: 245 ERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRV 304
Query: 319 --WNILLALYVRCKDYCECLRLFDR----------------------------------- 341
N+L+ +Y C+D RLFD
Sbjct: 305 NVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDK 364
Query: 342 -------MIRGDAKPNEAS--------------------LMSVLTACANMGVIDIGQWIH 374
MI G N++S L+SV++AC+N+ ++ G+ +H
Sbjct: 365 DNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVH 424
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
YI+K + ++L TSL+ MY KCG M+ A VFD + EK WN++I+G M+G
Sbjct: 425 EYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGLVT 484
Query: 435 KALEMFMEMEKRG-PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
++L+MF EME G PN+ TF VLSAC H G+V EG +F LMQ Y+I P + HYGC
Sbjct: 485 RSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGC 544
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGRAG +R++E+++ +PM WGALL AC H +SE+G+ V + L++L+P
Sbjct: 545 MVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKLVKLDPDH 604
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
G +LSNIYASEG W V++LR MK++ + K G S+V P
Sbjct: 605 DGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSMVEP 647
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/646 (32%), Positives = 351/646 (54%), Gaps = 55/646 (8%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
+LP+ P N P T+N+R S + ++ CS++++ Q H ++ +G+
Sbjct: 11 SLPRHP-----NFSNPNQPTTNNER------SRHTISLIDRCSSLRQLKQTHAHMIRTGM 59
Query: 86 SQDSFAASRVLK-KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY 144
D ++AS++ +S +S+ + FD I +P++F NT+++++ DP ++ +
Sbjct: 60 FSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAF 119
Query: 145 YEKMMAKFVEH-NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
+ + ++ + N YTFP L K A + SL G+ +H +K D+FV NSLIH Y
Sbjct: 120 LDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYF 179
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT------- 256
CG++ A KVF D+V+WNSMI+G+V+ A ELF M D+
Sbjct: 180 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 239
Query: 257 --------------------------------WNSMISGYVDVGDMEAANGLFDLMPFRD 284
N+M+ Y G +E A LFD M +D
Sbjct: 240 VLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 299
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-I 343
V+W M+DGYA + +AR + M +++V+WN L++ Y + E L +F + +
Sbjct: 300 NVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQL 359
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ + K N+ +L+S L+ACA +G +++G+WIHSYI+K IK + ++++L+ MY+KCG ++
Sbjct: 360 QKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLE 419
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VF+++ +++V W++MI G MHG G +A++MF +M++ PN TF V AC+
Sbjct: 420 KAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACS 479
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V E F M+ Y I P+ +HY C+VD+LGR+G + + + + +P+ ++W
Sbjct: 480 HTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 539
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GALL AC H+N L ++ L+ELEPR+ G +VLLSNIYA GKWD V LR+ M+
Sbjct: 540 GALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVT 599
Query: 584 ELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQMK 628
L+K G S + E + +N P + VY L E+ ++K
Sbjct: 600 GLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE-KVYGKLHEVMEKLK 644
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 304/536 (56%), Gaps = 40/536 (7%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL----SVL 111
LS+P L LE C ++ + QI +Q++++GL +D FA+SR++ C L ++L
Sbjct: 49 LSNPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIA-FCAISEWRDLDYCTNIL 107
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F + P+ F N ++ FL +P A+ Y + + ++YT+PLL K CA +
Sbjct: 108 F--NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLS 165
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+R G ++ ++ GF+ D+FV N++IH+ CG++ ARK+F+ V
Sbjct: 166 LIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCV----------- 214
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
RD+ +WNSMI+GY G++E+A LFD M + +VSW M
Sbjct: 215 --------------------RDLVSWNSMINGYC--GNLESARKLFDSMTNKTMVSWTTM 252
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+ GYA+ G + A FD M ++VV WN ++ YV E L LF+ M + P+E
Sbjct: 253 VVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDE 312
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+++S L+AC+ +G +D+G WIH YI+K + +V L T+L+ MYAKCG + A VF
Sbjct: 313 VTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQE 372
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ +N ++W ++I G +HG A+ F EM P++ TF+ +LSAC H G+V EG
Sbjct: 373 LPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEG 432
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
YF M + + PK++HY CMVDLLGRAGL+ ++EEL+ +P+EA +WGAL AC
Sbjct: 433 RKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACR 492
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
H N +G+ A L++++P D G YVLL+N+Y W E R++M+++ +EK
Sbjct: 493 IHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEK 548
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/612 (35%), Positives = 337/612 (55%), Gaps = 57/612 (9%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK- 97
P+P + N + ++HP+L LESC++ + Q+H L V+GL+ F ASR+L
Sbjct: 22 PRPAWNTNRN-----LVVTHPLLSLLESCASFRRLLQLHALLTVTGLAAHRFPASRLLAF 76
Query: 98 -KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
L T + + P+A+M T+M+ FL P AL + +++ + +
Sbjct: 77 CALSTPPRLAHAAAILARASPGPNAYMLGTMMRGFLRARLPARALGL-FRRVVRDRLPAD 135
Query: 157 HYTFPLLGKVCAGIRSLRE------GKKVHARIVKCGFELD-LFVRNSLIHMYSVCGEVL 209
TF K A G+ +H +KCGF + + V N+L+H Y+ +
Sbjct: 136 ARTFVFAVKAAAAAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLD 195
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF----------------------- 246
DA KVF++ P D+V+W +++DGY + A LF
Sbjct: 196 DAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAI 255
Query: 247 -------------DFMPE----RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
++ E R + N+++ + G + A +FD M +DV SW
Sbjct: 256 GQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWT 315
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M++ YAK G++ SA F M RNVVSW+ ++A Y + E + LF MI P
Sbjct: 316 SMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDP 375
Query: 350 NEASLMSVLTACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
+A+L+SVL+ACA +G +D+G+WI+ +YI +I V L +L+ M+AKCG + A +
Sbjct: 376 IDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKL 435
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M E+NVVSWN+MIM + +HGQ E+A+ +F +++ P+ TF+ +L++C+H+G+V
Sbjct: 436 FDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLV 495
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M+ Y+IEP+VEHY CM+DLLG+ GL+ ++ E+ +PMEA A WGALL+
Sbjct: 496 SEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLN 555
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N E+G VA L+EL+P D G YVL+S IYAS+ KWD+V+ LR M+++ ++K
Sbjct: 556 ACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKN 615
Query: 589 VG-SSLVHPGEF 599
G SS+ G+F
Sbjct: 616 PGCSSIEVEGKF 627
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 301/538 (55%), Gaps = 43/538 (7%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFMCN 125
C ++++ Q+H +++ G D A ++ + + + L FD I PD FM N
Sbjct: 18 CRSLRQIKQVHALMVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPDRFMYN 77
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKF-------VEHNHYTFPLLGKVCAGIRSLREGKK 178
T+++ P A+S Y MA+ V + TFP + + CA + + G +
Sbjct: 78 TLIRGAAHSYAPRDAVSIYAR--MARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQ 135
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
VHA +VK G E D FVRN+LI M++ CG++
Sbjct: 136 VHAHVVKAGCESDAFVRNALIGMHATCGDL------------------------------ 165
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
G A LFD D W++MISG+ GD+ AA LFD P +D+VSWN MI YAK+
Sbjct: 166 -GAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKL 224
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G++ AR FD R+VVSWN +++ YVRC + + + LF++M KP+ +++S+L
Sbjct: 225 GDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLL 284
Query: 359 TACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+ACA+ G +D G+ +H ++ RI P +L +L+ MYAKCG M A VF M +KN
Sbjct: 285 SACADSGDMDAGRRLHRFLSGRFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKN 344
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
V +WNS+I G +HG +A+++F +M + P++ TF+ VL AC+H GMV +G YF+
Sbjct: 345 VSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFN 404
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
LMQ+ Y IEP V+HYGCMVD+L RAGL++++ E + + +E P +W LL AC H
Sbjct: 405 LMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEL 464
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EL + Q L++ G +VLLSNIYAS G+W EN+R++M + + K G ++V
Sbjct: 465 ELAEHANQELLKARSDASGDFVLLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVV 522
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/579 (36%), Positives = 333/579 (57%), Gaps = 46/579 (7%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVLF---- 112
+ L SC T + +QIH +L+ +G+ ++S +R++ +S L+ + V
Sbjct: 9 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 68
Query: 113 --FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
F + D F+ N ++KS DP AL M+ V + ++ L+ K C+ +
Sbjct: 69 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALL-LLCLMLENGVSVDKFSLSLVLKACSRL 127
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
++ G ++H + K G DLF++N LI +Y CG + +R++F+ P D V++NSMI
Sbjct: 128 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 187
Query: 231 DGYVKNREVGFARELFDFMP----------------------------------ERDIFT 256
DGYVK + ARELFD MP E+D+ +
Sbjct: 188 DGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS 247
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WNSMI GYV G +E A GLFD+MP RDVV+W MIDGYAK+G V A+ FD+M R+V
Sbjct: 248 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 307
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V++N ++A YV+ K + E L +F M + P++ +L+ VL A A +G + +H
Sbjct: 308 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 367
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
YI + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE
Sbjct: 368 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 427
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A +M +++E+ P+D TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMV
Sbjct: 428 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 487
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L R+G + ++ L+ ++P+E +W L+ACS H E G++VA+HL+ +P
Sbjct: 488 DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS 547
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+YAS G W +V +R +MKE+++EK G S +
Sbjct: 548 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/579 (36%), Positives = 333/579 (57%), Gaps = 46/579 (7%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVLF---- 112
+ L SC T + +QIH +L+ +G+ ++S +R++ +S L+ + V
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 113 --FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
F + D F+ N ++KS DP AL M+ V + ++ L+ K C+ +
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALL-LLCLMLENGVSVDKFSLSLVLKACSRL 134
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
++ G ++H + K G DLF++N LI +Y CG + +R++F+ P D V++NSMI
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 231 DGYVKNREVGFARELFDFMP----------------------------------ERDIFT 256
DGYVK + ARELFD MP E+D+ +
Sbjct: 195 DGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS 254
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WNSMI GYV G +E A GLFD+MP RDVV+W MIDGYAK+G V A+ FD+M R+V
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V++N ++A YV+ K + E L +F M + P++ +L+ VL A A +G + +H
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 374
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
YI + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A +M +++E+ P+D TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMV
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 494
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L R+G + ++ L+ ++P+E +W L+ACS H E G++VA+HL+ +P
Sbjct: 495 DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS 554
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+YAS G W +V +R +MKE+++EK G S +
Sbjct: 555 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/539 (36%), Positives = 309/539 (57%), Gaps = 35/539 (6%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS--SVSLSVLFFDGI 116
PIL E ++ E Q H +L +GL D+F+AS+++ T+ +VS + + I
Sbjct: 11 PILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI 70
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+ P+ F N++++++ + P AL+ + E ++ V + Y+F + K CA EG
Sbjct: 71 ESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEG 129
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+++H +K D+FV N+LI++Y G FE
Sbjct: 130 RQIHGLFMKSDLVTDVFVENTLINVYGRSG-------YFE-------------------- 162
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
AR++ D MP RD +WNS++S Y+D G +E A LFD M R+V SWN MI GYA
Sbjct: 163 ----IARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYA 218
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLM 355
G V AR FD M +++VVSWN ++ Y Y E L +F+ M+ A +P+ +L+
Sbjct: 219 AAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLV 278
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+VL+ACA++G + G+W+H YI K I+ + ++T+L+ MY+KCG +D A VF + +++
Sbjct: 279 NVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKR 338
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V +WNS+I G +HG G+ ALE+F EM G PN TFI VLSAC H G++ + F
Sbjct: 339 DVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLF 398
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
++M +Y IEP +EHYGCMVDLLGR G ++EELV+++P + L +LL AC
Sbjct: 399 EMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGK 458
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
E + +A L+E PR+ YV +SN+YAS G+WDE +R M+ + ++K G S++
Sbjct: 459 LEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMI 517
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/573 (37%), Positives = 328/573 (57%), Gaps = 48/573 (8%)
Query: 68 STVKEFHQIHTQLLVSGLSQDS---------FAASR--VLKKLCTSLSSVSLSVLFFDGI 116
+ ++ QIH +L+ +G Q+S FAASR L + + S F G
Sbjct: 1 TQIRRCEQIHARLIKTGFIQNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGE 60
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
E D F+ N ++KS DP AL ++ M+ V + ++ L+ K C+ + ++EG
Sbjct: 61 VE-DPFLWNAVIKSHSHGVDPKRAL-IWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEG 118
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
++H + K G DLF++N LI +Y CG + AR++F+ P D V++NSMIDGYVK
Sbjct: 119 MQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKC 178
Query: 237 REVGFARELFDFMP----------------------------------ERDIFTWNSMIS 262
+G ARELFD MP E+D+ +WNS+I
Sbjct: 179 GLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLID 238
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
GYV G ME A LF +MP RDVV+W MIDGYAK+G V A+ FD+M R+VV++N +
Sbjct: 239 GYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSM 298
Query: 323 LALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
+A YV+ K + E L +F+ M + P+E +L+ VL+A A +G + ++ YI +
Sbjct: 299 MAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKYIVEKS 358
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
L +L+ M++KCG + A +VF+ + K++ WN+MI G +HG GE A +M M
Sbjct: 359 FPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSIDHWNAMIGGLAIHGHGELAFDMLM 418
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
++E+ P+D TFI VL+AC+H+G+V EG F+LM+R +KIEP+++HYGC+VD+L R+
Sbjct: 419 QIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCIVDILSRS 478
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
G + ++ L+ +PME +W L AC E+G++VA+HL+ +P YVLLS
Sbjct: 479 GSIELAKHLIEDMPMEPNDVIWRTFLIACRNRKEFEIGELVAKHLILQAGYNPSSYVLLS 538
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N+YAS G W +V +R +MK+++L K G S +
Sbjct: 539 NMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWI 571
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 317/547 (57%), Gaps = 5/547 (0%)
Query: 53 IVDLSHPILQKLES----CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL 108
I LSHP L LE+ C + +QIH +++ GL QD S + +S SS+S
Sbjct: 2 IQRLSHPSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSY 61
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
S F+ + P ++ N ++K + F +S M + YTFPL+ KVC+
Sbjct: 62 SSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 121
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+R G VH +++ GF+ D+ V S + Y C ++ ARKVF + P + V+W +
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
++ YVK+ E+ A+ +FD MPER++ +WN+++ G V GD+ A LFD MP RD++S+
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
MIDGYAK G++ SAR+ F+ +V +W+ L+ Y + E ++F M + K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
P+E ++ +++AC+ MG ++ + + SY+ Q+ + +L+ M AKCG MD A
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F+ M ++++VS+ SM+ G +HG G +A+ +F +M G P++ F +L C + +
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG YF+LM++ Y I +HY C+V+LL R G ++++ EL+ +P EA + WG+LL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
CS H N+E+ ++VA+HL ELEP+ G YVLLSNIYA+ +W +V +LR M E + K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 588 AVGSSLV 594
G S +
Sbjct: 542 ICGRSWI 548
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/512 (39%), Positives = 300/512 (58%), Gaps = 36/512 (7%)
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
E D F+ N ++KSF DP AL + M+ V + ++ L+ K C+ + + G
Sbjct: 55 EEDPFLWNAVIKSFSHGVDPRNAL-LLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGM 113
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH + K G DLF++N LI +Y CG + AR+VF+ P D V++NSMIDGYVK
Sbjct: 114 QVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCG 173
Query: 238 EVGFARELFDFMP----------------------------------ERDIFTWNSMISG 263
+ ARELFD MP E+D+ +WNS+I G
Sbjct: 174 LIESARELFDLMPREKKNLISWNCMISGYTQSEDGVNVASKLFDEMPEKDLISWNSLIDG 233
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
YV +E A LFDLMP +DVV+W MIDGYAK+G V A+ FD M R+VV++N ++
Sbjct: 234 YVKHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMM 293
Query: 324 ALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
A YV+ K + E + +F+ M + P+E +L+ VL+A A +G + IH YI +
Sbjct: 294 AGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKF 353
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
+ L +L+ Y+KCG + + VF+ + K++ WN+MI G +HG GE A +M ++
Sbjct: 354 RLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 413
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
+EKR P+D TFI VL+AC+H+G+V EG F+LM+R +KIEPK++HYGCMVD+L R+G
Sbjct: 414 IEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSG 473
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSN 562
+ ++ L+ ++P+E +W L+ACS H E G++VA+HL +P +VLLSN
Sbjct: 474 SIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSN 533
Query: 563 IYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+YAS G W EV +R MKE++L K G S +
Sbjct: 534 MYASFGMWKEVRRVRTTMKERKLRKIPGCSWI 565
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 122/320 (38%), Gaps = 54/320 (16%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + D N++M ++ A+ + + + + T ++ A +
Sbjct: 277 LFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLG 336
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L + +H I+ F L + +LI YS CG + + +VFE+ + WN+MI
Sbjct: 337 RLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIG 396
Query: 232 GYVKNREVGFARELFDFMPE-------RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
G + G FD + + D T+ +++ G ++ F+LM +
Sbjct: 397 GLAIH---GLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKH 453
Query: 285 VVS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ + CM+D ++ G++ A+N + M +
Sbjct: 454 KIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPI-------------------------- 487
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI--HSYIQKCRIKPDVLLSTSLLTMYA 397
+PN+ + LTAC+N + G+ + H ++Q +L L MYA
Sbjct: 488 --------EPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVL---LSNMYA 536
Query: 398 KCGVMDLARNVFDNMTEKNV 417
G+ R V M E+ +
Sbjct: 537 SFGMWKEVRRVRTTMKERKL 556
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/649 (32%), Positives = 363/649 (55%), Gaps = 54/649 (8%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
N K+P + + KP F+ + L S ++ L +C ++ + QI +Q+ GL
Sbjct: 68 NHSKSPVYIPSFFFKPPFSSSSASNLQTNKKS--CIECLRNCKSMDQLKQIQSQIFRIGL 125
Query: 86 SQDSFAASRVLKKLC--TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF 143
D ++++ C +SL ++ + F+ +Q+P F+ N ++K + +
Sbjct: 126 EGDRDTINKLMA-FCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAK-RGILRKVLL 183
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
++++ + + +T+P + K +R +R+G+KV IVK G +LD +V NSLI MY
Sbjct: 184 LFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYY 243
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYV----------------------------- 234
V +A+K+F++ D V+WN MI GYV
Sbjct: 244 ELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVV 303
Query: 235 ---------KNREVGFARELFDFMPERDIFTW---NSMISGYVDVGDMEAANGLFDLMPF 282
KN E+G E+ +++ + FT N+++ Y G + A +FD M
Sbjct: 304 STLSACTALKNLELG--DEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSM 361
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
++V+ W MI GY G++ AR+ FD+ +R+VV W ++ YV+ + + + LF M
Sbjct: 362 KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 421
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
KP++ +++++LT CA +G ++ G+WIH Y+ + RI DV++ T+L+ MY+KCG +
Sbjct: 422 QIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCV 481
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
D + +F + +K+ SW S+I G M+G+ +AL +F EME+ G P+D TFI VLSAC
Sbjct: 482 DKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSAC 541
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP-- 520
+H G+V EG +F+ M+++++IEPKVEHYGC++DLLGRAGL+ ++EEL+ ++P+E
Sbjct: 542 SHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIV 601
Query: 521 -ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
L+GALLSAC H+N ++G+ +A+ L +E D + LL+NIYAS +W++ + +RR
Sbjct: 602 VPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRK 661
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI-VYSMLGEIGAQM 627
MKE ++K G SL+ E +V + P H + I + SML + Q+
Sbjct: 662 MKELGVKKMPGCSLIEVDGIVHEFLVGD-PSHPEMIEICSMLNRVTGQL 709
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 331/585 (56%), Gaps = 54/585 (9%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS---LSSVSLSVLFFDGI 116
+ ++ +C T+++ QIH + SG +D+ AA+ +L+ TS + + F+ +
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 117 QEPDAFMCNTIMKSFLMLND--PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ + F NTI++ F ++ A++ +YE M +FVE N +TFP + K CA ++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EGK++H +K GF D FV ++L+ MY +CG + DA
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDA----------------------- 182
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
R +F N + V + D +G ++V WN MIDG
Sbjct: 183 -----------------RVLFYKNIIEKDMVVMTDRRKRDG--------EIVLWNVMIDG 217
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y ++G+ +AR FD+M R+VVSWN +++ Y + + + +F M +GD +PN +L
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+SVL A + +G +++G+W+H Y + I+ D +L ++L+ MY+KCG+++ A +VF+ +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
+NV++W++MI G+ +HGQ A++ F +M + G P+D +I +L+AC+H G+V EG Y
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M + +EP++EHYGCMVDLLGR+GL+ ++EE + +P++ +W ALL AC
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N E+GK VA LM++ P D G YV LSN+YAS+G W EV +R MKEK++ K G SL+
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC-RRDVASQI 638
E +VE+ + + SML EI ++++ R + +Q+
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQV 562
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/576 (35%), Positives = 328/576 (56%), Gaps = 6/576 (1%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
+L +L ++ C ++ F QIH QL+ SGL D F S+V++ + + + +
Sbjct: 3 NLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLE 62
Query: 115 -GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
G +F N+++ ++ P A+S Y + FV + +TFP+L K C+
Sbjct: 63 QGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVP-DMFTFPVLLKACSNFSGS 121
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
REG++VH +VK G D +V+NSLI Y CG+ A KVF++ V D+V+WNS+I G+
Sbjct: 122 REGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGF 181
Query: 234 VKNREVGFARELFDFMP-ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR---DVVSWN 289
+K A +F M E + T S+++ GD+ G+ ++ R ++V N
Sbjct: 182 MKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGN 241
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M+D Y K G A+N FD + R++VSW I++ V+ + L LF M P
Sbjct: 242 AMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISP 301
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ L SVL+ACA++G +D G W+H YI + IK D+ + T+++ MYAKCG +++A +F
Sbjct: 302 DAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIF 361
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
+M+++N +WN+++ G MHG +AL +F M G PN+ TF+ +L+AC H G+V
Sbjct: 362 YSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVD 421
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG YFD M ++Y + PK+EHYGCM+DL RAGL+ ++ EL +PM+ +WG LL+A
Sbjct: 422 EGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNA 481
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C+T N EL + +++EL+ D G +VLLSNI A +W V LRR+MK++ + KA
Sbjct: 482 CTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAP 541
Query: 590 GSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGA 625
GSS++ A E +V + + +Y +L I +
Sbjct: 542 GSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINS 577
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 318/581 (54%), Gaps = 47/581 (8%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDA 121
LESC + K+ QIH Q +V+GL F+ SR++ L S + S L F I P+
Sbjct: 16 LESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNL 75
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
FM NT+++ + ++P A+ Y + N++TFP L CA + SL G +VH+
Sbjct: 76 FMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHS 135
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
I+K GFE DLFVRN+LIH+YSV G + AR +F++ V DLV++N+MI GY + +
Sbjct: 136 HIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPES 195
Query: 242 ARELFDFMPERDI----FTW-------------------------------------NSM 260
A LF M I FT+ +++
Sbjct: 196 ALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAI 255
Query: 261 ISGYVDVGDMEAANGLFDLM-PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
+ Y G + A +F M + +W+ M+ GYA+ G + AR F+ M R+V+SW
Sbjct: 256 VDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISW 315
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQ 378
+++ Y + E L LF M KP+E +L++VL+ACA +G D+G+ + H YI+
Sbjct: 316 TAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIE 375
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE--KNVVSWNSMIMGYGMHGQGEKA 436
+ +L+ +++ MYAKCG +D A +F + + K +NSMI G HG GE A
Sbjct: 376 NGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETA 435
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+ +F E+ G P++ TF+ VL AC H+G++ EG F+ M Y I+P++EHYGCMVD
Sbjct: 436 ITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVD 495
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGR G + ++ +LV K+P EA +W ALLSAC TH N ++G+I Q L+E+E +
Sbjct: 496 LLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGAR 555
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
YVLLSNI A +W+E +R++M++ + K G S + G
Sbjct: 556 YVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELG 596
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/568 (34%), Positives = 318/568 (55%), Gaps = 43/568 (7%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCN 125
S T KE +H L+ + L D F S V++ S +++ + L F+ I+ P + N
Sbjct: 29 STDTSKE---LHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWN 85
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
+++ + P A+ Y +M + + N+ T L K CA + + G+K+H +K
Sbjct: 86 HMIRGLSQSDHPVEAIHMY-TRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALK 144
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
GFE LFV N+LIHMY++CG++ A+K+F+ DLV+WN++I GY + + L
Sbjct: 145 LGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRL 204
Query: 246 FDFMP---------------------------------------ERDIFTWNSMISGYVD 266
FD M E D++ N++I Y
Sbjct: 205 FDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGR 264
Query: 267 VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALY 326
E A G+FD M R++VSWN ++ G+AK+GN+T+AR FD M R+V+SW ++ Y
Sbjct: 265 RSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGY 324
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ + + ++LF M+ KP++ ++ SVL+ACA++G +D+G +H YI++ ++ D+
Sbjct: 325 SQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADI 384
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
+ SL+ MY KCG+++ A VF M +K+ VSW S+I G ++G AL++F +M +
Sbjct: 385 YVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLRE 444
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G P TF+ +L AC HAG+V +G YF+ M+ ++ + P ++HYGC+VDLL R+G +
Sbjct: 445 GVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDK 504
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ E + K+P+ +W LLSAC H N L +I + L+EL+P D G YVLLSN YA
Sbjct: 505 AYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAG 564
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLV 594
+WD+ +R +M++ +++K GSS +
Sbjct: 565 VDRWDDAMKMRELMEDSDVQKPSGSSSI 592
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 202/446 (45%), Gaps = 57/446 (12%)
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL-DARKVFEDGP 219
P G+V S K++HA +++ D F+ + +I YS+ L A VF
Sbjct: 18 PKSGRVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIE 77
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
LV WN MI G ++ A ++ M + I T N++ ++ +A + D+
Sbjct: 78 CPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGI-TGNNLTLIFL----FKACARVSDI 132
Query: 280 MPFRDV--------------VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+ R + VS N +I YA G + A+ FD M R++VSWN L+
Sbjct: 133 VSGRKIHVHALKLGFESYLFVS-NALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICG 191
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y + Y E LRLFD M + K + +++ ++ AC+++G + + YI++ ++ D
Sbjct: 192 YSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEID 251
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN------------------------ 421
V L +L+ MY + + +LA+ VFD M E+N+VSWN
Sbjct: 252 VYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPK 311
Query: 422 -------SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
SMI GY Q A+++F EM P+ T VLSAC H G + GW
Sbjct: 312 RDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAV 371
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS--ACST 532
++R + ++ + ++D+ + G++ + E+ ++ + W +++S A +
Sbjct: 372 HHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-DKDSVSWTSVISGLAVNG 429
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYV 558
+NS L + +Q L E G +V
Sbjct: 430 FANSAL-DLFSQMLREGVQPTHGTFV 454
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/439 (41%), Positives = 275/439 (62%), Gaps = 2/439 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N++I Y+ G++ +AR++F++ PV D+ TW +M+ GY++NR V ARELFD MP
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ER+ +WN+M++GYV ME A LFD+MP R+V +WN MI GYA+ G ++ A+N FD+
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW ++A Y + E LRLF +M R + N +S S L+ CA++ +++G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H + K + + +LL MY KCG ++ A ++F M K++VSWN+MI GY H
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GE AL F M++ G P+DAT + VLSAC+H G+V +G YF M + Y + P +H
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH 548
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CMVDLLGRAGL+ D+ L+ +P E A+WG LL A H N+EL + A + +E
Sbjct: 549 YACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 608
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCP 609
P + G YVLLSN+YAS G+W +V LR M++K ++K G S + + + S+ +
Sbjct: 609 PENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFH 668
Query: 610 PHRKCIVYSMLGEIGAQMK 628
P + I ++ L E+ +MK
Sbjct: 669 PEKDEI-FAFLEELDLRMK 686
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 199/396 (50%), Gaps = 44/396 (11%)
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
++KCG + D+ N I Y G +A +VF+ P W V++N MI GY++N E A
Sbjct: 56 LLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELA 114
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
R+LFD MPERD+ +WN MI GYV ++ A LF++MP RDV SWN M+ GYA+ G V
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR-----------MIRGDAKPNE 351
AR+ FDRM +N VSWN LL+ YV+ E LF ++ G K +
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 352 ASLMSVLTACANMGVIDIGQW---IHSYIQKCRIK-----------PDVLLSTSLLTMYA 397
++ +M V D+ W I Y Q +I DV T++++ Y
Sbjct: 235 --IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
+ +++ AR +FD M E+N VSWN+M+ GY QGE+ +EM E+ P N +T+
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGY---VQGER-MEMAKELFDVMPCRNVSTWNT 348
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE--HYGCMVDLLGRAGLMRDSEELVSKLP 515
+++ G + E FD M PK + + M+ ++G ++ L ++
Sbjct: 349 MITGYAQCGKISEAKNLFDKM-------PKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 516 MEAG---PALWGALLSACSTHSNSELGKIVAQHLME 548
E G + + + LS C+ ELGK + L++
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
+S + FD + + D ++ + F AL + + M + N +F
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ-MEREGGRLNRSSFSSALS 417
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA + +L GK++H R+VK G+E FV N+L+ MY CG + +A +F++ D+V+
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 226 WNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMIS-----GYVDVGDMEAANGL 276
WN+MI GY ++ A F+ M D T +++S G VD G
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
D + + CM+D + G + A N M + W LL
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 329/552 (59%), Gaps = 16/552 (2%)
Query: 95 VLKKLCTSLSSVSLSVLFFD---GI-----------QEPDAFMCNTIMKSFLMLNDPFGA 140
+ K + SS++L +D GI DAF+CN+++K+++ + +
Sbjct: 12 LFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSES 71
Query: 141 LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
+ Y + + +TF +L K CA ++ EG+++H+ +V GF LDL+ +L+
Sbjct: 72 FALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVD 131
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSM 260
MY+ G++ ARK+F++ V+W ++I GYV++ ++ A +LFD M E+D +N+M
Sbjct: 132 MYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTM 191
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
I YV +GDM +A LFD MP R VVSW MI GY+ GN+ SAR+ FD M +N+ SWN
Sbjct: 192 IDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWN 251
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+++ Y + K E L+LF M + +P+E +++SVL A A++G +D+G W+H ++++
Sbjct: 252 AMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRR 311
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
++ + T+L+ MYAKCG + +R VFDNM EK SWN++I + ++G+ ++AL +
Sbjct: 312 KKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGL 371
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
FMEM +G PN+ T I VLSAC H+G+V EG +F M+ + + PK+EHYGCMVDLLG
Sbjct: 372 FMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLG 430
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
RAG ++++E+L+ +P EA + + L AC + + V + +++E + G Y++
Sbjct: 431 RAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIM 490
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSM 619
L N+YA+E +W E + ++ +M+ ++K G S + E + + + ++S+
Sbjct: 491 LRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSV 550
Query: 620 LGEIGAQMKMCR 631
LG++ MK R
Sbjct: 551 LGQLWVHMKGTR 562
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/536 (36%), Positives = 297/536 (55%), Gaps = 33/536 (6%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGIQEP 119
L L C ++ F QIH +L GL D F A ++L SLS S+ + F P
Sbjct: 9 LSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNP 68
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D FM NT+++ + P +L + E F + ++F + K A +RS+R G ++
Sbjct: 69 DVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQL 128
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H + + G + LFV +LI MY CG V
Sbjct: 129 HCQALVHGLDTHLFVGTTLISMYGECGFV------------------------------- 157
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
GFAR++FD MPE + WN+M++ GDM+ LFDLMP R+++SWN M+ GY K G
Sbjct: 158 GFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAG 217
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR F M M++ VSW+ ++ + + E F + R +PNE SL VL+
Sbjct: 218 ELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLS 277
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN-MTEKNVV 418
ACA G ++ G+ +H +I+K + V ++ +LL Y+KCG + +A+ VF+ M E+N+V
Sbjct: 278 ACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIV 337
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW SM+ MHG GE+A+ +F +ME+ G P++ FI +L AC+HAG+V +G YFD M
Sbjct: 338 SWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKM 397
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ +Y IEP +EHYGCMVDL GRAG ++ + E V ++P+ +W LL ACS H + +L
Sbjct: 398 KGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKL 457
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ V + L EL+P + +VLLSN YA GKW + ++RR M E+ + K G S++
Sbjct: 458 AEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMI 513
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 303/536 (56%), Gaps = 41/536 (7%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFMCN 125
C ++++ Q+H +++ G D A +L ++ +++ + L FD I PD FM N
Sbjct: 18 CRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFMYN 77
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKF-----VEHNHYTFPLLGKVCAGIRSLREGKKVH 180
T+++ P A+S Y MA+ V + TFP + + C + + G +VH
Sbjct: 78 TLIRGAAHTAAPRDAVSLYAR--MARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVH 135
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A +VK G E D FVRN+LI M++ CGE+ G
Sbjct: 136 AHVVKAGCESDAFVRNALIGMHASCGEL-------------------------------G 164
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
A LFD D W++MI+G GD+ AA LFD P +D VSWN MI YAK G
Sbjct: 165 VASALFDGRAREDAVAWSAMITGCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGE 224
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ AR F+R+ R+VVSWN +++ +VRC + + LF++M R KP+ +++S+L+A
Sbjct: 225 MAPARVLFNRIPERDVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSA 284
Query: 361 CANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
CA+ G ID+G+ +HS + + R V+L +L+ MYAKCG M A VF M +K+V
Sbjct: 285 CADSGDIDVGRRLHSSLSEMFLRTGFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVS 344
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+WNS+I G +HG +++++F +M K P++ TF+ VL AC+H GMV +G YF+LM
Sbjct: 345 TWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLM 404
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
Q Y+IEP V+HYGCMVD+LGRAGL++++ E + + +E +W LL AC H EL
Sbjct: 405 QHHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIEL 464
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ + L++ + G YVLLSNIYAS G+W E E +R++M + + K G ++V
Sbjct: 465 AEHANRQLLKARNDESGDYVLLSNIYASAGEWSESEKMRKLMDDSGVNKQAGRTVV 520
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 312/560 (55%), Gaps = 29/560 (5%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV-SLSVLFFDGIQ 117
P L L SC +V+E QIH ++ + ++ + + + LCT ++S+ V D IQ
Sbjct: 28 PQLLLLSSCKSVREIKQIHASIIKANTTRST--TTLPIISLCTKITSLLQQDVHLADSIQ 85
Query: 118 -------------EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
+ ++ N I++S N+ F + Y +M+ + + YT P L
Sbjct: 86 NLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLL 145
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K C+ + E ++HA +K G +LFV+N+L+ Y+V G + KVF+ GP WDL+
Sbjct: 146 KACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLI 205
Query: 225 TWNSMIDGYVKNREVGFARE----LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
+W ++I Y K +G+ E F D T ++S +GD + M
Sbjct: 206 SWTTLIQAYSK---MGYPSEAIAAFFRMNCTADRMTLVVVLSACSQLGDFTLGKKILAYM 262
Query: 281 PFR------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
DV N ++D Y K G AR F M ++N+VSWN +++ + E
Sbjct: 263 DHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKE 322
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L +F RM KP+ +L+ VL +CAN+G +++G+W+HSYI K +K D ++ +L+
Sbjct: 323 ALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVD 382
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAKCG +D A VF M K+V S+ +MI+G+ MHG+ ++AL +F EM + G P+ T
Sbjct: 383 MYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVT 442
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+ VLSAC+HAG++ EG +F M R+Y ++P+ EHYGCMVDLLGRAGL+ ++E +K+
Sbjct: 443 LVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKM 502
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
P+ ++WG+LL AC H+ ELG+ V Q L+E+EP G Y+L+SNIY+S +W +
Sbjct: 503 PIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDAL 562
Query: 575 NLRRIMKEKELEKAVGSSLV 594
R+ MK+ ++K G S +
Sbjct: 563 KWRKAMKQNNIKKTPGCSSI 582
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 306/534 (57%), Gaps = 40/534 (7%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-------SSVSLSVLFFDGIQEPDA 121
+K QIH ++++G + + ++ + TSL + + + F I +PD
Sbjct: 14 NLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDT 73
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
FM N +++ +P A+S Y E M FV+ + YTFP + K C + + G VH
Sbjct: 74 FMYNVMIRGSSQSPNPLRAISLYTE-MHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHG 132
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+++ GF + VRN+L+ ++ CG++
Sbjct: 133 MVLRLGFGSNAVVRNTLLVFHAKCGDL-------------------------------NV 161
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
A LFD + D+ W+S+I+GY GD++ A LF+ MP RD+VSWN MI GY K G +
Sbjct: 162 ATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEM 221
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
SAR FD +++VVSWN ++A YV C + L LF+ M R P+E +L+S+L+AC
Sbjct: 222 ESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSAC 281
Query: 362 ANMGVIDIGQWIHSYIQKCRI-KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
A++G ++ G+ +H+ + + + K LL +L+ MYAKCG + + +VF ++T+K+V+SW
Sbjct: 282 ADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISW 341
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
NS+I+G +HG G+++L +F M++ PN+ TF+ VL AC+HAG + EG+ YFDLM
Sbjct: 342 NSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSS 401
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
YKIEP + H GCMVD+LGRAGL++++ + + + +E +W LL+AC H + EL K
Sbjct: 402 EYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAK 461
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ + L + G YVL+SN+YAS G+WD E +R++M + + K GSS V
Sbjct: 462 VANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFV 515
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/472 (40%), Positives = 285/472 (60%), Gaps = 4/472 (0%)
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
Y+F + AG+ +R VH+ +VK G D FV N+LI YS G DARKVF++
Sbjct: 9 YSFLIKALSAAGVAPVR---AVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDE 65
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF 277
P D+V+WN+ + V+ E+ R+LFD MPE+D +WN+++ GY G++EAA LF
Sbjct: 66 MPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELF 125
Query: 278 DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
MP R+VVSW+ M+ GY K G++ AR FD+M +N+V+W I+++ + E +
Sbjct: 126 QRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGK 185
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LF +M + + A+++S+L ACA G + +G+ IH Y++K + + +L+ M+
Sbjct: 186 LFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFC 245
Query: 398 KCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
KCG ++ A VFD T +K+ VSWNS+I G+ MHG G+KALE+F +M+++G P+ T I
Sbjct: 246 KCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMI 305
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSACTH G V EG +F M+R Y I P++EHYGCM+DLLGR GL++++ +L+ +P
Sbjct: 306 NVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPW 365
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
E +WG+LLSAC H N E +I L +L+P + G Y +LSNIYA G+W ++
Sbjct: 366 EPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKA 425
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
R MK +K GSS V E E V + + M+ + + +K
Sbjct: 426 RMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 477
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 67/319 (21%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++KM +K N T+ ++ CA + E K+ A++ + ELD+ +++ + +
Sbjct: 156 FDKMPSK----NLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDV---AAVVSILAA 208
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
C E ++ I YV+ R +G R N++I +
Sbjct: 209 CAES-------------GSLSLGKRIHRYVRKRNLG-----------RSTHVCNALIDMF 244
Query: 265 VDVGDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
G + A+ +FD +D VSWN +I G+A G+ A F +M +
Sbjct: 245 CKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGF------- 297
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRI 382
P+ ++++VL+AC +MG +D G+ S +++ I
Sbjct: 298 ------------------------NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGI 333
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFM 441
P + ++ + + G++ A ++ +M E N V W S++ +H E A
Sbjct: 334 MPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVN 393
Query: 442 EMEKRGPTPNDATFICVLS 460
E+ K P++A VLS
Sbjct: 394 ELSKL--QPSNAGNYAVLS 410
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 325/559 (58%), Gaps = 42/559 (7%)
Query: 77 HTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVL--FFDGIQEPDAFMCNTIMKS 130
H +L+ +G+ ++S +R++ S L+ + V + G + D ++ N ++KS
Sbjct: 2 HARLIKTGIIKNSNLTTRIVLAFAASPRPYLAEFARFVFHEYHYGGEVEDPYLWNAMIKS 61
Query: 131 FLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL 190
DP AL + M+ V + ++ L+ K C+ + ++ G ++H + K G
Sbjct: 62 HSHGTDPRRAL-LLFCLMLEIGVPVDKFSLSLVMKACSRLGFVKGGLQIHGFLKKTGLWS 120
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
DLF++N LI +Y CG + AR++F+ P D V++NSMIDGYVK + A ELFD MP
Sbjct: 121 DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMP 180
Query: 251 ----------------------------------ERDIFTWNSMISGYVDVGDMEAANGL 276
E+D+ +WNSMI GYV G +E A L
Sbjct: 181 REMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDL 240
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
FD++P RDVV+W MIDGYAK+G V A+ FD+M R+VV++N ++A YV+ + + E L
Sbjct: 241 FDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEAL 300
Query: 337 RLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+F M + P+E +L+ VL+A A +G + +H YI + + L +L+ M
Sbjct: 301 EIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDM 360
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y+KCG + A VF+ + K++ WN+MI G +HG GE A +M +++E+R P+D TF
Sbjct: 361 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITF 420
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMVD+L R+G + ++ L+ ++P
Sbjct: 421 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 480
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+E +W L+ACS H E G++VA+HL+ +P YVLLSN+YAS G W +V
Sbjct: 481 IEPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYASFGMWKDVRR 540
Query: 576 LRRIMKEKELEKAVGSSLV 594
+R +MKE+++EK G S +
Sbjct: 541 VRTMMKERKIEKIPGCSWI 559
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/404 (43%), Positives = 259/404 (64%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N++I Y+ GE+ +AR++F++ PV D+ TW +M+ GY++NR V ARELFD MP
Sbjct: 244 DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP 303
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ER+ +WN+M++GYV +E A LFD+MP R+V +WN MI GYA+ G ++ A+N FD+
Sbjct: 304 ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDK 363
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW ++A Y + E LRLF M R + N +S S L+ CA++ +++G
Sbjct: 364 MPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELG 423
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H + K + + +LL MY KCG ++ A ++F M K++VSWN+MI GY H
Sbjct: 424 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 483
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GE+AL F M++ G P+DAT + VLSAC+H G+V +G YF M + Y + P +H
Sbjct: 484 GFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQH 543
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CMVDLLGRAGL+ ++ L+ +P E A+WG LL A H N+EL + A + +E
Sbjct: 544 YACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 603
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
P + G YVLLSN+YAS G+W +V LR M++K ++K G S +
Sbjct: 604 PENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 647
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 186/396 (46%), Gaps = 71/396 (17%)
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N+ A +F+ K + T PL + I+ + R +C L +F
Sbjct: 24 NNANSASNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFK 83
Query: 195 R---------NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
R N++I Y GE AR +F++ P DLV+WN MI GYV+NR +G AREL
Sbjct: 84 RMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKAREL 143
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD--------------------- 284
F+ MPERD+ +WN+++SGY G ++ A +FD MP ++
Sbjct: 144 FERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEAC 203
Query: 285 ----------VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+VSWNC++ G+ K + AR FD M +R+VVSWN ++ Y + + E
Sbjct: 204 VLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDE 263
Query: 335 CLRLFDR-----------MIRG--------------DAKP--NEASLMSVLTACANMGVI 367
+LFD M+ G D P NE S ++L +
Sbjct: 264 ARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERV 323
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
++ + + + CR +V +++T YA+CG + A+N+FD M +++ VSW +MI GY
Sbjct: 324 EMAKELFD-VMPCR---NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 379
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
G +AL +F+ ME+ G N ++F LS C
Sbjct: 380 SQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCA 415
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 177/345 (51%), Gaps = 26/345 (7%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N I Y G +A +VF+ P W V++N+MI GY++N E AR LFD MPERD+
Sbjct: 63 NVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLV 122
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN MI GYV ++ A LF+ MP RDV SWN ++ GYA+ G V AR FDRM +N
Sbjct: 123 SWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKN 182
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VSWN LL+ YV+ E LF ++ N A V C G + + + +
Sbjct: 183 DVSWNALLSAYVQNSKLEEACVLF------GSRENWA---LVSWNCLLGGFVKKKKIVEA 233
Query: 376 --YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+ +++ DV+ +++T YA+ G +D AR +FD +V +W +M+ GY +
Sbjct: 234 RQFFDSMKVR-DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMV 292
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP--KVEHY 491
E+A E+F M P N+ ++ +L+ V ++ + ++ + P V +
Sbjct: 293 EEARELFDRM----PERNEVSWNAMLAGYVQGERV-------EMAKELFDVMPCRNVSTW 341
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+ + G + +++ L K+P + P W A+++ S +S
Sbjct: 342 NTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS 385
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 16/182 (8%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N +F CA + +L GK++H R+VK G+E FV N+L+ MY CG + +A +F
Sbjct: 403 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 462
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-------ERDIFTWNSMISGYVDVG 268
++ D+V+WN+MI GY ++ GF E F + D T +++S G
Sbjct: 463 KEMAGKDIVSWNTMIAGYSRH---GFGEEALRFFESMKREGLKPDDATMVAVLSACSHTG 519
Query: 269 DMEAANGLFDLMPFRDVVSWN-----CMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNIL 322
++ F M V N CM+D + G + A N M + W L
Sbjct: 520 LVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTL 579
Query: 323 LA 324
L
Sbjct: 580 LG 581
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 308/534 (57%), Gaps = 35/534 (6%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS--SVSLSVLFFDGI 116
PIL E ++ E Q H +L +GL D+F+AS+++ T+ +VS + + I
Sbjct: 41 PILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI 100
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P+ F N++++++ + P AL+ + E ++ V + Y+F + K CA EG
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEG 159
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+++H +K G D+FV N+L+++Y G FE
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSG-------YFE-------------------- 192
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
AR++ D MP RD +WNS++S Y++ G ++ A LFD M R+V SWN MI GYA
Sbjct: 193 ----IARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYA 248
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLM 355
G V A+ FD M +R+VVSWN ++ Y Y E L +F++M+ KP+ +L+
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
SVL+ACA++G + G+W+H YI K I+ + L+T+L+ MY+KCG +D A VF +++
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR 368
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V +WNS+I +HG G+ ALE+F EM G PN TFI VLSAC H GM+ + F
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
++M +Y++EP +EHYGCMVDLLGR G + ++EELV+++P + L +LL AC
Sbjct: 429 EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQ 488
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
E + +A L+EL RD Y +SN+YAS+G+W++V + RR M+ + + +++
Sbjct: 489 LEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 213/581 (36%), Positives = 338/581 (58%), Gaps = 46/581 (7%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVLF------FDGIQEPDA 121
+ +++H +L+ +GL ++ +R++ S L+ + V + F + D
Sbjct: 7 DXNKMHARLITTGLIKNPNLTTRIVLAFVASRRSYLAEFARCVFYEYYLCSFSAGEGEDP 66
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
++ N ++KS+ DP AL + M+ V + ++ L+ K C+ + L+EG ++H
Sbjct: 67 YLWNAVIKSYSHGIDPRRAL-LLFCLMIENGVCVDKFSLSLVLKACSRLEFLKEGMQIHG 125
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK------ 235
+ K G DLF++N LI +Y CG + AR+VF+ P D V++NSMIDGYVK
Sbjct: 126 FLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKS 185
Query: 236 --------NREV-----------GFAR---------ELFDFMPERDIFTWNSMISGYVDV 267
RE+ G+A+ +LF MPE+D+ +WNSMI+G V
Sbjct: 186 AHKLFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLISWNSMINGCVKH 245
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
G +E A GLFD+MP RDVV+W MIDGYAK+G V A++ FD+M R+VV+ N ++A YV
Sbjct: 246 GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYV 305
Query: 328 RCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ K + E L +F+ M + P+E +L+ VL+A A +G + +H YI + R
Sbjct: 306 QNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPLGG 365
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
L +L+ M++KCG + A +VF+ + K++ WN+MI G +HG GE A +M M++E+
Sbjct: 366 KLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFDMLMQIERC 425
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
P+ TFI VL+AC+H+G+V EG F+LM+R + IEP+++HYGC+VD+L R+G +
Sbjct: 426 SIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDVLSRSGSIEL 485
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
++ L+ +PME +W + LSACSTH E G++VA+HL+ +P YVLLSN+YAS
Sbjct: 486 AKHLIEDMPMEPNDVIWRSFLSACSTHEEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 545
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
G W +V +R +MK+++L K G S + E V++
Sbjct: 546 LGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFFVQD 586
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 326/600 (54%), Gaps = 27/600 (4%)
Query: 36 ANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRV 95
A P PK+ +QR + + + L V+E +H Q+L GL +D AAS++
Sbjct: 86 ALRPAPKWGGAPSQRRLVEEHLASLPHGLPRLRHVQE---LHAQVLRQGLHRDPRAASKL 142
Query: 96 LKKLC----TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAK 151
+ S A + NT+++++ + + P AL+ + + M +
Sbjct: 143 IASYALLRRVPACRCVFSAAAAPPFAPSTALLANTLLRAYALNSLPHAALAVFVD-MPLR 201
Query: 152 FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA 211
+ Y+F + AG+ +R H + K G D FV N+LI YS + DA
Sbjct: 202 QRDTFTYSFLIKALATAGVTPVR---AAHTHVFKLGSVEDTFVGNALIDAYSKNDGLSDA 258
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
+KVF++ D+V+WN+ + V+ EV AR +FD MPE+D +WN+M+ GY G+ E
Sbjct: 259 KKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAE 318
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
A LF MP R+VVSW+ ++ Y K G++ AR FD+M +N+V+W I+++ +
Sbjct: 319 EAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGL 378
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E RLF M + + +++S+L ACA G + +G+ IH ++++ ++ L+ +
Sbjct: 379 VGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNA 438
Query: 392 LLTMYAKCGVMDLARNVFDN-MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
L+ M+ KCG ++ A +FD + EK+ VSWN +I G+ MHG GEKAL +F +M+++G P
Sbjct: 439 LMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHP 498
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ T I VLSACTH G+V EG +F M+ Y I+P++EHYGCMVDLLGR GL++++ ++
Sbjct: 499 DAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDM 558
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ +P E +WG+LLSAC H N E ++ A L L+P + G Y +LSNIYA GKW
Sbjct: 559 IKSMPWEPNEVIWGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKW 618
Query: 571 DEVENLRRIMKEKELEKAVGSSLV---------------HPGEFASESIVENCPPHRKCI 615
++ R MK +K GSS + HP +++ H KC+
Sbjct: 619 SDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFTVGDRKHPESDQISDMIDRLSSHVKCV 678
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/525 (35%), Positives = 315/525 (60%), Gaps = 8/525 (1%)
Query: 97 KKLCTSLSSVSLSV---LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
K L S S+V + LF D+F+CN+++K++L + +FY + +
Sbjct: 15 KFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYRDLRKETCL 74
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+++TF + K C + +G ++H++I + GF D++V ++ MY+ G++ AR
Sbjct: 75 APDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-RDIFTWNSMISGYVDVGDMEA 272
VF++ P V+W ++I GYV+ E+ A +LFD MP+ +D+ +N+M+ G+V GDM +
Sbjct: 135 VFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSGDMTS 194
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A LFD M + V++W MI GY ++ SAR FD M RN+VSWN ++ Y + K
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQP 254
Query: 333 CECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E +RLF M + P++ +++SVL A ++ G + +G+W H ++Q+ + V + T+
Sbjct: 255 QEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTA 314
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
+L MY+KCG ++ A+ +FD M EK V SWN+MI GY ++G AL++F+ M K P+
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKE-EKPD 373
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
+ T + V+SAC H G+V EG +F +M R + + K+EHYGCMVDLLGRAG ++ +E L+
Sbjct: 374 EITMLAVISACNHGGLVEEGRKWFQMM-RKFGLNAKIEHYGCMVDLLGRAGNLKQAEHLI 432
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+ +P + + + LSAC + + E + + + +ELEP++ G YVLL N+YA++ +WD
Sbjct: 433 TNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 572 EVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCI 615
+ ++ +M++ E +K VG SL+ SE I + PHR+ I
Sbjct: 493 DFGMVKNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHRQSI 537
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 337/628 (53%), Gaps = 45/628 (7%)
Query: 44 TDTDNQRLPIVDLSHPILQKL----ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL 99
T+T + + +L P Q L + C ++K+ +H Q+++ GL+ +++
Sbjct: 19 TETQISKTILQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSS- 77
Query: 100 CTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYT 159
L + + FD I +P+ FM N ++K + +DP +L Y +M+ + N +T
Sbjct: 78 SVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSL-LLYRRMVCDGILPNQFT 136
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
P + K CA G VHA+ K G V+N+++++Y CG + AR+VF+D
Sbjct: 137 IPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDIS 196
Query: 220 VWDLVTWNSMIDGYVK----NREVGFARELFDFMPERDIFTW------------------ 257
LV+WNSMI+GY K V RE+ + E D+FT
Sbjct: 197 ERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRF 256
Query: 258 -----------------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
N+++ Y G+++ A +FD M +DVVSW CMI+ YA G
Sbjct: 257 VHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGL 316
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ A F++M +NVVSWN ++ +V+ Y E + LF RM N+ +L+++L++
Sbjct: 317 IDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSS 376
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
C++MG + +G+ HSYI I L +++ MYAKCG + A +VF M EKN VSW
Sbjct: 377 CSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSW 436
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N +I +HG G++A+EMF +M+ G P++ TF +LSAC+H+G+V G YF++M
Sbjct: 437 NVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNL 496
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
+ I P VEHY CMVDLLGR GL+ ++ L+ K+P++ +W ALL AC T+ N +GK
Sbjct: 497 TFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGK 556
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
+ + L+EL + G YVLLSN+Y+ +WD+++N+ +I+ + ++K S +
Sbjct: 557 QIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCC 616
Query: 601 SESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ +V++ +YSMLG++ +K
Sbjct: 617 YQFMVDDKRHGASTSIYSMLGQLMDHLK 644
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 298/542 (54%), Gaps = 50/542 (9%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFMCN 125
C ++++ Q+H +++ G DS A ++ + + + L FD I PD FM N
Sbjct: 18 CRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYN 77
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEH-----------NHYTFPLLGKVCAGIRSLR 174
T+++ + P A+S Y A+ H + TFP + + CA + +
Sbjct: 78 TLIRGAAHSDAPRDAVSIY-----ARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGE 132
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G +VHA +VK G E D FVRN+LI M++ G++
Sbjct: 133 TGAQVHAHVVKAGCESDAFVRNALIGMHATLGDL-------------------------- 166
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
G A LFD D W++MISG+ GD+ AA LFD P +D+VSWN MI
Sbjct: 167 -----GAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITA 221
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK+G++ AR FD R+VVSWN +++ YVRC + + LF++M KP+ ++
Sbjct: 222 YAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTM 281
Query: 355 MSVLTACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+S+L+ACA+ G +D G+ +H ++ RI P L +L+ MYAKCG M A VF M
Sbjct: 282 LSLLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLM 341
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+KNV +WNS+I G +HG +++ +F +M + P++ TF+ VL+AC+H GMV +G
Sbjct: 342 QDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGH 401
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF LMQ+ Y+IEP ++HYGCMVD+L R GL++++ E + + +E P +W LL AC
Sbjct: 402 EYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRI 461
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H EL + + L++ G +VLLSNIYAS G+W EN+R++M + + K G +
Sbjct: 462 HGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRA 521
Query: 593 LV 594
++
Sbjct: 522 VI 523
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 298/542 (54%), Gaps = 50/542 (9%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFMCN 125
C ++++ Q+H +++ G DS A ++ + + + L FD I PD FM N
Sbjct: 18 CRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYN 77
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEH-----------NHYTFPLLGKVCAGIRSLR 174
T+++ + P A+S Y A+ H + TFP + + CA + +
Sbjct: 78 TLIRGAAHSDAPRDAVSIY-----ARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGE 132
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G +VHA +VK G E D FVRN+LI M++ G++
Sbjct: 133 TGAQVHAHVVKAGCESDAFVRNALIGMHATLGDL-------------------------- 166
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
G A LFD D W++MISG+ GD+ AA LFD P +D+VSWN MI
Sbjct: 167 -----GAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITA 221
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK+G++ AR FD R+VVSWN +++ YVRC + + LF++M KP+ ++
Sbjct: 222 YAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTM 281
Query: 355 MSVLTACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+S+L+ACA+ G +D G+ +H ++ RI P L +L+ MYAKCG M A VF M
Sbjct: 282 LSLLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLM 341
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+KNV +WNS+I G +HG +++ +F +M + P++ TF+ VL+AC+H GMV +G
Sbjct: 342 QDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGH 401
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF LMQ+ Y+IEP ++HYGCMVD+L R GL++++ E + + +E P +W LL AC
Sbjct: 402 EYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRI 461
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H EL + + L++ G +VLLSNIYAS G+W EN+R++M + + K G +
Sbjct: 462 HGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRA 521
Query: 593 LV 594
++
Sbjct: 522 VI 523
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 323/545 (59%), Gaps = 21/545 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++S + + QIH +LLV GL F ++++ +S ++ + FD + P F
Sbjct: 28 IDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHA-SSSFGDITFARQVFDDLPRPQIFP 86
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N I++ + N AL Y +A+ V + +TFP L K C+G+ L+ G+ VHA++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD--LVTWNSMIDGYVKNREVGF 241
+ GF+ D+FV+N LI +Y+ C + AR VFE P+ + +V+W +++ Y +N E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 242 ARELFDFMPERDIF-TWNSMIS---GYVDVGDMEAANGL--------FDLMPFRDVVSWN 289
A E+F M + D+ W +++S + + D++ + ++ P ++S N
Sbjct: 206 ALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP-DLLISLN 264
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M YAK G V +A+ FD+M N++ WN +++ Y + E + +F MI D +P
Sbjct: 265 TM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ S+ S ++ACA +G ++ + ++ Y+ + + DV +S++L+ M+AKCG ++ AR VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D +++VV W++MI+GYG+HG+ +A+ ++ ME+ G PND TF+ +L AC H+GMV
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EGWW+F+LM +KI P+ +HY C++DLLGRAG + + E++ +P++ G +WGALLSA
Sbjct: 442 EGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H + ELG+ AQ L ++P + G YV LSN+YA+ WD V +R MKEK L K V
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 590 GSSLV 594
G S V
Sbjct: 561 GCSWV 565
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 316/581 (54%), Gaps = 55/581 (9%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P + LS P SC T ++ Q+H + +G QD A+ V+K S + +
Sbjct: 18 PPLILSKP----FTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARA 73
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPF---GALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
F + EP+ F NTI++ ND AL + + V+ N +TFP + K CA
Sbjct: 74 VFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACA 133
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
LREGK++H IVK GF D FV ++L+ MY +C + DA +
Sbjct: 134 RASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSL-------------- 179
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVG-DMEAANGLFDLMPFRDVVS 287
F + + DF G + D +G +VV
Sbjct: 180 ------------FCKNVVDF-------------DGSCQMELDKRKQDG--------NVVL 206
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
WN MIDG ++G++ SA+N FD M R+VVSWN++++ Y + + E + LF M +
Sbjct: 207 WNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNI 266
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
PN +L+SVL A A +G +++G+WIH Y K +I+ D +L ++L+ MY+KCG +D A
Sbjct: 267 DPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQ 326
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ + ++N ++W+++I + MHG+ E A+ F M K G TPND +I +LSAC+HAG+
Sbjct: 327 VFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGL 386
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG +F M ++ ++P++EHYGCMVDLLGRAG + ++EEL+ +P+E +W ALL
Sbjct: 387 VEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALL 446
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H N ++G+ VA+ LMEL P D G YV LSN+YAS G W+ V +R MK ++ K
Sbjct: 447 GACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRK 506
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G S + E +VE+ + + +MLGE+ +++
Sbjct: 507 DPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLR 547
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/510 (39%), Positives = 305/510 (59%), Gaps = 36/510 (7%)
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D F+ N ++KS DP AL + M+ V + ++ L+ K C+ + +EG +V
Sbjct: 57 DPFLWNAVIKSHSHGADPRKAL-LLFCLMLENGVLVDKFSMSLVLKACSRLGFAKEGMQV 115
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK---- 235
H ++K DLF++N LI +Y CG + AR+VF+ P D V++NSMIDGYVK
Sbjct: 116 HGFLIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLV 175
Query: 236 ----------NRE--------------------VGFARELFDFMPERDIFTWNSMISGYV 265
RE V A +LFD MPE+D+ +WNSMI GYV
Sbjct: 176 ESAGELFDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSMIGGYV 235
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G +E A GLFD+MP RDVV+W MIDGY K+G V A+ FD+M R+VV++N +++
Sbjct: 236 KHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYNSMMSG 295
Query: 326 YVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+V+ + + E L +F+ M + P+E +L+ VL+A A +G + +H YI + R
Sbjct: 296 FVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLL 355
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE A +M +++E
Sbjct: 356 SGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIE 415
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
+R P+ TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMVD+L R+G +
Sbjct: 416 RRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSI 475
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ L+ ++P+E +W L+ACS H E G++VA+HL+ +P YVLLSN+Y
Sbjct: 476 ELAKNLIEEMPIEPNDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMY 535
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
AS G W +V +R +MKEK++EK G S +
Sbjct: 536 ASNGMWKDVRRVRTMMKEKKIEKLPGCSWI 565
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 125/330 (37%), Gaps = 56/330 (16%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L V + FD + D N++M F+ AL + + + T +
Sbjct: 268 LGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVI 327
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ A + L + +H IV+ F L + +LI MYS CG + A +VFE
Sbjct: 328 VLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKS 387
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM--PER-----DIFTWNSMISGYVDVGDMEAANG 275
+ WN+MI G + G FD + ER D T+ +++ G ++
Sbjct: 388 IDHWNAMIGGLAVH---GLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLL 444
Query: 276 LFDLMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
F+LM + + + CM+D A+ G++ A+N + M +
Sbjct: 445 CFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPI----------------- 487
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPD--VL 387
+PN+ + L AC++ + G+ + + I + P VL
Sbjct: 488 -----------------EPNDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSSYVL 530
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
LS MYA G+ R V M EK +
Sbjct: 531 LS----NMYASNGMWKDVRRVRTMMKEKKI 556
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 219/673 (32%), Positives = 353/673 (52%), Gaps = 108/673 (16%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDA 121
L+SC + F Q+ +Q +++GL D +AASR++ T+L S+ F+ ++ P+
Sbjct: 10 LQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNT 69
Query: 122 FMCNTIMKSFLML-NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F NTIM++ L L N P AL +Y+ +A + + YT+P+L + CA S EG+++H
Sbjct: 70 FTWNTIMRAHLYLQNSPHQAL-LHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLH 128
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVC-------------------------------GEVL 209
A V GF+ D++VRN+L+++Y+VC GEV
Sbjct: 129 AHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVE 188
Query: 210 DARKVFEDGPVW---------------------------------DLVTWNSMIDGYVKN 236
+A +VFE P D+V+W++M+ Y +N
Sbjct: 189 EAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQN 248
Query: 237 REVGFARELFDFMP---------------------------------------ERDIFTW 257
A LF M E +
Sbjct: 249 EMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLK 308
Query: 258 NSMISGYVDVGDMEAANGLFD-LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
N++I Y G++ A +FD D++SWN MI GY + G++ A F M ++V
Sbjct: 309 NALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDV 368
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSW+ +++ Y + + + E L LF M +P+E +L+S ++AC ++ +D+G+WIH+Y
Sbjct: 369 VSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAY 428
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I + +++ +V+LST+L+ MY KCG ++ A VF M EK V +WN++I+G M+G E++
Sbjct: 429 ISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQS 488
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L MF +M+K G PN+ TF+ VL AC H G+V +G YF+ M +KIE ++HYGCMVD
Sbjct: 489 LNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVD 548
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGRAGL++++EEL+ +PM A WGALL AC H ++E+G+ + + L++L+P G
Sbjct: 549 LLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGF 608
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIV 616
+VLLSNIYAS+G W V +R IM + + K G S++ E + + + +
Sbjct: 609 HVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDI 668
Query: 617 YSMLGEIGAQMKM 629
ML + A++K+
Sbjct: 669 EHMLDVVAAKLKI 681
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/449 (41%), Positives = 277/449 (61%), Gaps = 4/449 (0%)
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
Y+F + AG+ +R VH+ +VK G D FV N+LI YS G DARKVF++
Sbjct: 132 YSFLIKALSAAGVAPVR---AVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDE 188
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF 277
P D+V+WN+ + V+ E+ R+LFD MPE+D +WN+++ GY G++EAA LF
Sbjct: 189 MPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELF 248
Query: 278 DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
MP R+VVSW+ M+ GY K G++ AR FD+M +N+V+W I+++ + E +
Sbjct: 249 QRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGK 308
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LF +M + + A+++S+L ACA G + +G+ IH Y++K + + +L+ M+
Sbjct: 309 LFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFC 368
Query: 398 KCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
KCG ++ A VFD T +K+ VSWNS+I G+ MHG G+KALE+F +M+++G P+ T I
Sbjct: 369 KCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMI 428
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSACTH G V EG +F M+R Y I P++EHYGCM+DLLGR GL++++ +L+ +P
Sbjct: 429 NVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPW 488
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
E +WG+LLSAC H N E +I L +L+P + G Y +LSNIYA G+W ++
Sbjct: 489 EPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKA 548
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIV 605
R MK +K GSS V E E V
Sbjct: 549 RMQMKGTGSQKTAGSSWVELNETFHEFTV 577
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 143/363 (39%), Gaps = 68/363 (18%)
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
T V + F + E + +T++ + D ++KM +K N T+
Sbjct: 236 TKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGD-LEMARVIFDKMPSK----NLVTW 290
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
++ CA + E K+ A++ + ELD+ +++ + + C E
Sbjct: 291 TIMVSACAQKGLVDEAGKLFAQMKEASVELDV---AAVVSILAACAES------------ 335
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
++ I YV+ R +G R N++I + G + A+ +FD
Sbjct: 336 -GSLSLGKRIHRYVRKRNLG-----------RSTHVCNALIDMFCKCGCVNRADYVFDTE 383
Query: 281 PF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+D VSWN +I G+A G+ A F +M +
Sbjct: 384 TVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGF----------------------- 420
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAK 398
P+ ++++VL+AC +MG +D G+ S +++ I P + ++ + +
Sbjct: 421 --------NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGR 472
Query: 399 CGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
G++ A ++ +M E N V W S++ +H E A E+ K P++A
Sbjct: 473 GGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKL--QPSNAGNYA 530
Query: 458 VLS 460
VLS
Sbjct: 531 VLS 533
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 322/578 (55%), Gaps = 21/578 (3%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P PK+ + R + + + L V+E +H QLL GL +D AS+++
Sbjct: 83 PAPKWGGAPSHRRLVEEHLASLPHGLPRLRHVQE---LHAQLLKQGLHRDPHTASKLIAS 139
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIM-------KSFLMLNDPFGALSFYYE---KM 148
+ +F + P++ ++ +++ + + P AL+ + + +
Sbjct: 140 YALLRRVPACRCVFSAAVALPNSPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDVPLRQ 199
Query: 149 MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
F Y+F + AG+ +R HA +VK G D FV N+LI YS +
Sbjct: 200 RGTFT----YSFLIKALAAAGLTPVR---GAHAHVVKLGSAEDTFVGNALIDAYSKNQGL 252
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVG 268
DA+KVF++ D+V+WN+ + V+ EV AR +FD MPE+D +WN+M+ GY G
Sbjct: 253 SDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAG 312
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+ E A LF MP R+VVSW+ ++ Y K G++ AR FD+M +N+V+W I+++ +
Sbjct: 313 EAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQ 372
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
E RLF M+ + + +++S+L ACA G + +G+ IH ++++ ++ L+
Sbjct: 373 KGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLV 432
Query: 389 STSLLTMYAKCGVMDLARNVFDN-MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+L+ M+ KCG ++ A +FD + EK++VSWN +I G+ MHG GEKALE+F +M+++G
Sbjct: 433 CNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQG 492
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P+ T I VLSACTH G+V EG +F M+ Y I+P++EHYGCMVDLLGR GL++++
Sbjct: 493 FHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEA 552
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+++ ++P E +WG+LLSAC H N E ++ L L+P G Y +LSNIYA
Sbjct: 553 VDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEA 612
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
GKW ++ R MK +K GSS + E E V
Sbjct: 613 GKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTV 650
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/438 (42%), Positives = 274/438 (62%), Gaps = 4/438 (0%)
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
Y+F + AG+ +R VH+ +VK G D FV N+LI YS G DARKVF++
Sbjct: 439 YSFLIKALSAAGVAPVR---AVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDE 495
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF 277
P D+V+WN+ + V+ E+ R+LFD MPE+D +WN+++ GY G++EAA LF
Sbjct: 496 MPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELF 555
Query: 278 DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
MP R+VVSW+ M+ GY K G++ AR FD+M +N+V+W I+++ + E +
Sbjct: 556 QRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGK 615
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LF +M + + A+++S+L ACA G + +G+ IH Y++K + + +L+ M+
Sbjct: 616 LFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFC 675
Query: 398 KCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
KCG ++ A VFD T +K+ VSWNS+I G+ MHG G+KALE+F +M+++G P+ T I
Sbjct: 676 KCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMI 735
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSACTH G V EG +F M+R Y I P++EHYGCM+DLLGR GL++++ +L+ +P
Sbjct: 736 NVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPW 795
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
E +WG+LLSAC H N E +I L +L+P + G Y +LSNIYA G+W ++
Sbjct: 796 EPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKA 855
Query: 577 RRIMKEKELEKAVGSSLV 594
R MK +K GSS V
Sbjct: 856 RMQMKGTGSQKTAGSSWV 873
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 143/363 (39%), Gaps = 68/363 (18%)
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
T V + F + E + +T++ + D ++KM +K N T+
Sbjct: 543 TKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGD-LEMARVIFDKMPSK----NLVTW 597
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
++ CA + E K+ A++ + ELD+ +++ + + C E
Sbjct: 598 TIMVSACAQKGLVDEAGKLFAQMKEASVELDVA---AVVSILAACAES------------ 642
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
++ I YV+ R +G R N++I + G + A+ +FD
Sbjct: 643 -GSLSLGKRIHRYVRKRNLG-----------RSTHVCNALIDMFCKCGCVNRADYVFDTE 690
Query: 281 PF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+D VSWN +I G+A G+ A F +M +
Sbjct: 691 TVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGF----------------------- 727
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAK 398
P+ ++++VL+AC +MG +D G+ S +++ I P + ++ + +
Sbjct: 728 --------NPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGR 779
Query: 399 CGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
G++ A ++ +M E N V W S++ +H E A E+ K P++A
Sbjct: 780 GGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKL--QPSNAGNYA 837
Query: 458 VLS 460
VLS
Sbjct: 838 VLS 840
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/614 (33%), Positives = 350/614 (57%), Gaps = 52/614 (8%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC--TSLSSVSLSVLFFDGIQE 118
++ L +C ++ + QI +Q+ GL D ++++ C +SL ++ + F+ +Q+
Sbjct: 147 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMA-FCADSSLGNLRYAEKIFNYVQD 205
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P F+ N ++K + + ++++ + + +T+P + K +R +R+G+K
Sbjct: 206 PSLFVYNVMVKMYAK-RGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEK 264
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV---- 234
V IVK G +LD +V NSLI MY V +A+K+F++ D V+WN MI GYV
Sbjct: 265 VRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRR 324
Query: 235 ----------------------------------KNREVGFARELFDFMPERDIFTW--- 257
KN E+G E+ +++ + FT
Sbjct: 325 FEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELG--DEIHNYVRKELGFTTRID 382
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
N+++ Y G + A +FD M ++V+ W MI GY G++ AR+ FD+ +R+VV
Sbjct: 383 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 442
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
W ++ YV+ + + + LF M KP++ +++++LT CA +G ++ G+WIH Y+
Sbjct: 443 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 502
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ RI DV++ T+L+ MY+KCG +D + +F + +K+ SW S+I G M+G+ +AL
Sbjct: 503 DENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEAL 562
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
+F EME+ G P+D TFI VLSAC+H G+V EG +F+ M+++++IEPKVEHYGC++DL
Sbjct: 563 RLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDL 622
Query: 498 LGRAGLMRDSEELVSKLPMEAGP---ALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
LGRAGL+ ++EEL+ ++P+E L+GALLSAC H+N ++G+ +A+ L +E D
Sbjct: 623 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS 682
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
+ LL+NIYAS +W++ + +RR MKE ++K G SL+ E +V + P H +
Sbjct: 683 SIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGD-PSHPEM 741
Query: 615 I-VYSMLGEIGAQM 627
+ + SML + Q+
Sbjct: 742 MEICSMLNRVTGQL 755
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 322/578 (55%), Gaps = 21/578 (3%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P PK+ + R + + + L V+E +H QLL GL +D AS+++
Sbjct: 11 PAPKWGGAPSHRRLVEEHLASLPHGLPRLRHVQE---LHAQLLKQGLHRDPHTASKLIAS 67
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIM-------KSFLMLNDPFGALSFYYE---KM 148
+ +F + P++ ++ +++ + + P AL+ + + +
Sbjct: 68 YALLRRVPACRCVFSAAVALPNSPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDVPLRQ 127
Query: 149 MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
F Y+F + AG+ +R HA +VK G D FV N+LI YS +
Sbjct: 128 RGTFT----YSFLIKALAAAGLTPVR---GAHAHVVKLGSAEDTFVGNALIDAYSKNQGL 180
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVG 268
DA+KVF++ D+V+WN+ + V+ EV AR +FD MPE+D +WN+M+ GY G
Sbjct: 181 SDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAG 240
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+ E A LF MP R+VVSW+ ++ Y K G++ AR FD+M +N+V+W I+++ +
Sbjct: 241 EAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQ 300
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
E RLF M+ + + +++S+L ACA G + +G+ IH ++++ ++ L+
Sbjct: 301 KGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLV 360
Query: 389 STSLLTMYAKCGVMDLARNVFDN-MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+L+ M+ KCG ++ A +FD + EK++VSWN +I G+ MHG GEKALE+F +M+++G
Sbjct: 361 CNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQG 420
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P+ T I VLSACTH G+V EG +F M+ Y I+P++EHYGCMVDLLGR GL++++
Sbjct: 421 FHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEA 480
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+++ ++P E +WG+LLSAC H N E ++ L L+P G Y +LSNIYA
Sbjct: 481 VDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEA 540
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
GKW ++ R MK +K GSS + E E V
Sbjct: 541 GKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFTV 578
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/565 (35%), Positives = 327/565 (57%), Gaps = 35/565 (6%)
Query: 69 TVKEFHQIHTQLLVSGL-SQDSFAASRVLKKLCTSLSSVSLSVLFFDG-IQEPDAFMCNT 126
++++ +I Q++ S + S D + + +S ++ SVL F+ + P+ F N
Sbjct: 36 SMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNA 95
Query: 127 IMKSFLMLNDPFGALSFYYEKMMAKFVEH-NHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
++K+F N +S++ +++ + + YTF + K CAG+ + EG+KVH + K
Sbjct: 96 LLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTK 155
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
G E +LFVRNSL+ D Y K A++L
Sbjct: 156 YGCESNLFVRNSLV-------------------------------DLYFKVGCNCIAQKL 184
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
FD M RD+ +WN++ISGY G ++ A +FD M +++VSW+ MI GYA++GN+ AR
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEAR 244
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANM 364
F+ M MRNVVSWN ++A Y + + Y + + LF +M G PN+ +L+SVL+ACA++
Sbjct: 245 QLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHL 304
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G +D+G+WIH +I++ +I+ + L +L MYAKCG + A+ VF M E++V+SW+ +I
Sbjct: 305 GALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIII 364
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
MG M+G +A F EM + G PND +F+ +L+ACTHAG+V +G YFD+M ++Y I
Sbjct: 365 MGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGI 424
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
PK+EHYGC+VDLL RAG + +E L++ +PM+ +WGALL C + ++E G+ V
Sbjct: 425 TPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVW 484
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESI 604
++EL+ G V L+N+YAS G+ D+ + R M++ + K G S + E
Sbjct: 485 RILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFF 544
Query: 605 VENCPPHRKCIVYSMLGEIGAQMKM 629
+ + + +YSM+ E+ +MK+
Sbjct: 545 MGDSSHPQSLRIYSMIRELKWKMKV 569
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 329/585 (56%), Gaps = 11/585 (1%)
Query: 53 IVDLSHPILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
IV S I +L + S +K IH LL GL +D++ ++VL+ + + + S
Sbjct: 5 IVTKSAGIKNRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLR-FSFNFGNTNYSFR 63
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
D +EP+ F+ NT+++ L+LND F Y M + + + +TFP + K CA +
Sbjct: 64 ILDQTKEPNIFLFNTMIRG-LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVL 122
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
G K+H+ +VK G E D FV+ SLI++Y+ CG + +A KVF+D P + +W + I
Sbjct: 123 DSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATIS 182
Query: 232 GYV---KNRE-VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----FR 283
GYV K RE + R L + D F+ ++S GD+ + + + + R
Sbjct: 183 GYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVR 242
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+V ++D Y K GN+ AR+ FD M +N+VSW+ ++ Y E L LF +M+
Sbjct: 243 NVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKML 302
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
KP+ +++ VL +CA +G +++G W + I + +L T+L+ MYAKCG MD
Sbjct: 303 NEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMD 362
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A VF M +K+ V WN+ I G M G + AL +F +MEK G P+ TF+ +L ACT
Sbjct: 363 RAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACT 422
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HAG+V EG YF+ M+ ++ + P++EHYGCMVDLLGRAG + ++ +L+ +PMEA +W
Sbjct: 423 HAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVW 482
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GALL C H +++L ++V + L+ LEP G YVLLSNIYA+ KW+E +R IM E+
Sbjct: 483 GALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSER 542
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
++K G S + + +V + +Y+ LGE+ +K
Sbjct: 543 GVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLK 587
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 181/434 (41%), Gaps = 49/434 (11%)
Query: 43 FTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS 102
F D + P + L + +++ L +E +I+ + GLS DSF VLK
Sbjct: 62 FRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARV 121
Query: 103 LSS---VSLSVLFFDGIQEPDAFM----------CNTIMKSFLMLNDP--------FGAL 141
L S V + L E DAF+ C I +F + +D +
Sbjct: 122 LDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATI 181
Query: 142 SFY------------YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
S Y + +++ + + ++ + C LR G+ + I + G
Sbjct: 182 SGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV 241
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
++FV +L+ Y CG + AR VF+ ++V+W+SMI GY N G +E D
Sbjct: 242 RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASN---GLPKEALDLF 298
Query: 250 PER-------DIFTWNSMISGYVDVGDMEA---ANGLFDLMPFRD-VVSWNCMIDGYAKI 298
+ D + ++ +G +E A+ L + F D V +ID YAK
Sbjct: 299 FKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKC 358
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A F M ++ V WN ++ + L LF +M + KP+ + + +L
Sbjct: 359 GRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLL 418
Query: 359 TACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKN 416
AC + G+++ G ++ +S + P++ ++ + + G +D A + +M E N
Sbjct: 419 CACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEAN 478
Query: 417 VVSWNSMIMGYGMH 430
+ W +++ G +H
Sbjct: 479 AIVWGALLGGCRLH 492
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/555 (36%), Positives = 326/555 (58%), Gaps = 12/555 (2%)
Query: 84 GLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALS 142
GL D++ + +L+ C+ S + + F I++P+ F+ NT+++ L+ ND F
Sbjct: 41 GLCHDNYLLNMILR--CSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRG-LVSNDCFDDAI 97
Query: 143 FYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMY 202
+Y M ++ N++TFP + K CA + L+ G K+H +VK GF+ D+FV+ SL+ +Y
Sbjct: 98 EFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLY 157
Query: 203 SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV---KNRE-VGFARELFDFMPERDIFTWN 258
+ CG + DA KVF+D P ++V+W ++I GY+ K RE + R L + D FT
Sbjct: 158 AKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIV 217
Query: 259 SMISGYVDVGDMEAA----NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
++S +GD+ + + ++ R+V ++D YAK GN+ AR+ FD M +
Sbjct: 218 RVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEK 277
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
++VSW ++ Y E + LF +M R + KP+ +++ VL+ACA +G +++G+W+
Sbjct: 278 DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVS 337
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
+ + + +L T+L+ +YAKCG M A VF M EK+ V WN++I G M+G +
Sbjct: 338 GLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVK 397
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+ +F ++EK G P+ TFI +L CTHAG+V EG YF+ M R + + P +EHYGCM
Sbjct: 398 ISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCM 457
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VDLLGRAGL+ ++ +L+ +PMEA +WGALL AC H +++L ++ + L+ELEP +
Sbjct: 458 VDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNS 517
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
G YVLLSNIY++ KWDE +R M EK ++K G S + E +V +
Sbjct: 518 GNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSE 577
Query: 615 IVYSMLGEIGAQMKM 629
+Y+ L E+ +MK+
Sbjct: 578 KIYAKLDELTKKMKV 592
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 211/645 (32%), Positives = 346/645 (53%), Gaps = 55/645 (8%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
+LP+ P N P T+N+R + L +E C ++++ Q H ++ +G
Sbjct: 11 SLPRHP-----NFSNPNQPTTNNERSRHISL-------IERCVSLRQLKQTHGHMIRTGT 58
Query: 86 SQDSFAASRVLK-KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY 144
D ++AS++ +S +S+ + FD I +P++F NT+++++ DP ++ +
Sbjct: 59 FSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAF 118
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ + N YTFP L K A + SL G+ +H VK D+FV NSLIH Y
Sbjct: 119 LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS 178
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT-------- 256
CG++ A KVF D+V+WNSMI+G+V+ A ELF M D+
Sbjct: 179 CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 257 -------------------------------WNSMISGYVDVGDMEAANGLFDLMPFRDV 285
N+M+ Y G +E A LFD M +D
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IR 344
V+W M+DGYA + +AR + M +++V+WN L++ Y + E L +F + ++
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ K N+ +L+S L+ACA +G +++G+WIHSYI+K I+ + ++++L+ MY+KCG ++
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
+R VF+++ +++V W++MI G MHG G +A++MF +M++ PN TF V AC+H
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
G+V E F M+ Y I P+ +HY C+VD+LGR+G + + + + +P+ ++WG
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWG 538
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
ALL AC H+N L ++ L+ELEPR+ G +VLLSNIYA GKW+ V LR+ M+
Sbjct: 539 ALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTG 598
Query: 585 LEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQMK 628
L+K G S + E + +N P + VY L E+ ++K
Sbjct: 599 LKKEPGCSSIEIDGMIHEFLSGDNAHPMSE-KVYGKLHEVMEKLK 642
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 316/581 (54%), Gaps = 55/581 (9%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P + LS P SC T ++ Q+H + +G QD A+ V+K S + +
Sbjct: 18 PPLILSKP----FTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARA 73
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPF---GALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
F + EP+ F NTI++ ND AL + + V+ N +TFP + K CA
Sbjct: 74 VFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACA 133
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
LREGK++H IVK GF D FV ++L+ MY +C + DA +
Sbjct: 134 RASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSL-------------- 179
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVG-DMEAANGLFDLMPFRDVVS 287
F + + DF G + D +G +VV
Sbjct: 180 ------------FCKNVVDF-------------DGSCQMELDKRKQDG--------NVVL 206
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
WN MIDG ++G++ SA+N FD M R+VVSWN++++ Y + + E + LF M +
Sbjct: 207 WNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNI 266
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
PN +L+SVL A A +G +++G+WIH Y K +++ D +L ++L+ MY+KCG +D A
Sbjct: 267 DPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQ 326
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ + ++N ++W+++I + MHG+ E A+ F M K G TPND +I +LSAC+HAG+
Sbjct: 327 VFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGL 386
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG +F M ++ ++P++EHYGCMVDLLGRAG + ++EEL+ +P+E +W ALL
Sbjct: 387 VEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALL 446
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H N ++G+ VA+ LMEL P D G YV LSN+YAS G W+ V +R MK ++ K
Sbjct: 447 GACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRK 506
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G S + E +VE+ + + +MLGE+ +++
Sbjct: 507 DPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLR 547
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 207/605 (34%), Positives = 317/605 (52%), Gaps = 72/605 (11%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAF 122
L+ C T K+ Q+H LL + D VL+ L ++ ++ F+ I +P++
Sbjct: 28 LQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESS 87
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N +++ P AL ++KM K V+H+ +TF + K C+ +++LREG++VHA
Sbjct: 88 AYNVMIRGLAFKRSPDNAL-LLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHAL 146
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
I+K GF+ + FV N+LI MY+ CG++ G A
Sbjct: 147 ILKSGFKSNEFVENTLIQMYANCGQI-------------------------------GVA 175
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD-----LMPFRDV----VSWNC--- 290
R +FD MPER I WNSM+SGY G + LF + F DV V C
Sbjct: 176 RHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRL 235
Query: 291 ---------------------------MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
+ID YAK G V +AR FD M R+VV+W+ ++
Sbjct: 236 ANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMI 295
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
+ Y + E L LF M +G+ PNE +++SVL +CA +G + G+W+H YI+K ++K
Sbjct: 296 SGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK 355
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
V L T L+ YAKCG +D + VF M+ KNV +W ++I G +G+G+ ALE F M
Sbjct: 356 LTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSM 415
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
+ PND TFI VLSAC+HA +V +G F+ M+R + IEP++EHYGCMVD+LGRAG
Sbjct: 416 LENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGF 475
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
+ ++ + + +P +W LL++C H N E+ + +H+ LEP G Y+LLSN
Sbjct: 476 LEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNT 535
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
YA G+ ++ +R ++KEKE++K G SL+ E E+ ++ L ++
Sbjct: 536 YALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKM 595
Query: 624 GAQMK 628
Q+K
Sbjct: 596 MKQIK 600
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 322/545 (59%), Gaps = 21/545 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++S + + QIH +LLV GL F ++++ +S ++ + FD + P F
Sbjct: 28 IDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHA-SSSFGDITFARQVFDDLPRPQIFP 86
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N I++ + N AL Y +A+ V + +TFP L K C+G+ L+ G+ VHA++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD--LVTWNSMIDGYVKNREVGF 241
+ GF+ D+FV+N LI +Y+ C + AR VFE P+ + +V+W +++ Y +N E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 242 ARELFDFMPERDIF-TWNSMIS---GYVDVGDMEAANGL--------FDLMPFRDVVSWN 289
A E+F M + D+ W +++S + + D++ + ++ P ++S N
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP-DLLISLN 264
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M YAK G V +A+ FD+M N++ WN +++ Y + E + +F MI D +P
Sbjct: 265 TM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ S+ S ++ACA +G ++ + ++ Y+ + + DV +S++L+ M+AKCG ++ AR VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D +++VV W++MI+GYG+HG+ +A+ ++ ME+ G PND TF+ +L AC H+GMV
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EGWW+F+ M +KI P+ +HY C++DLLGRAG + + E++ +P++ G +WGALLSA
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H + ELG+ AQ L ++P + G YV LSN+YA+ WD V +R MKEK L K V
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 590 GSSLV 594
G S V
Sbjct: 561 GCSWV 565
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/516 (38%), Positives = 294/516 (56%), Gaps = 34/516 (6%)
Query: 80 LLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFG 139
++ + +QD F ++ + C++LS ++L+ F +Q P+ + N +++ +
Sbjct: 1 MIKTNTTQDCFLVNQFISA-CSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQ 59
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
AL +Y M+ V Y+F L K C + G+ VH + K GF+ +FV+ +LI
Sbjct: 60 AL-VHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLI 118
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNS 259
YS G+V G +R +FD MPERD+F W +
Sbjct: 119 EFYSTFGDV-------------------------------GGSRRVFDDMPERDVFAWTT 147
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
MIS +V GDM +A LFD MP ++V +WN MIDGY K+GN SA F++M R+++SW
Sbjct: 148 MISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISW 207
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
++ Y R K Y E + LF +I P+E ++ +V++ACA++G + +G+ +H Y+
Sbjct: 208 TTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVL 267
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
DV + +SL+ MYAKCG +D+A VF + KN+ WN +I G HG E+AL M
Sbjct: 268 QGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRM 327
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
F EME++ PN TFI +L+ACTHAG + EG +F M + Y I P+VEHYGCMVDLL
Sbjct: 328 FGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLS 387
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
+AGL+ D+ E++ + +E +WGALL+ C H N E+ I Q+LM LEP + G Y L
Sbjct: 388 KAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSL 447
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAV-GSSLV 594
L N+YA E +W+EV +R MK+ +EK GSS V
Sbjct: 448 LVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWV 483
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/544 (36%), Positives = 316/544 (58%), Gaps = 42/544 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF---- 112
++P++ L+ C ++ E QIH Q++ + L F SR++ C SLS VS + +
Sbjct: 6 TNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLI-AFC-SLSGVSGGLDYASSV 63
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMA--KFVEHNHYTFPLLGKVCAGI 170
F IQ P++F+ ++K F ++P +L Y +M++ + ++ P + K C +
Sbjct: 64 FSRIQHPNSFIFFALIKGFSDTSNPVESL-ILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+ EG++VH +++K D FV NS++ MY GE+ AR+VF+ P D+V+WNSMI
Sbjct: 123 LAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMI 182
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
GY+K E+ A ELFD MPERD+ + N+MI GY G E A +F+ M +DVV+W
Sbjct: 183 AGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTS 242
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MI Y + RC + L LF M+ +P+
Sbjct: 243 MISAYVQ-----------------------------NRCP--MKALDLFREMLSLGLRPD 271
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVF 409
+++SVL+A A++G ++ G+W+H+Y+ +I+ + ++L+ MY+KCG ++ A +VF
Sbjct: 272 GPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVF 331
Query: 410 DNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
+++ +N+ WNSMI G +HG +AL++F+EME+ PN+ TF+ +LS C+H G+V
Sbjct: 332 RSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLV 391
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG +YF+ M YKI P+++HYGCM+DL GRAG + D+ ++ +P EA W A+LS
Sbjct: 392 EEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILS 451
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
A H + E+GK A +EL P D YVLLSNIYA G+WD+V +R +M+++ ++K
Sbjct: 452 ASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKI 511
Query: 589 VGSS 592
G S
Sbjct: 512 AGCS 515
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/615 (34%), Positives = 330/615 (53%), Gaps = 45/615 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC-TSLSSVSLSVLFFDG 115
S IL+ ++ C+ + QIH +L + D + AS++L +S S + + F+
Sbjct: 72 STNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQ 131
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I +P+ + NT+++ + +DP + + + + N +TFP L K + ++ L
Sbjct: 132 IPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHL 191
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV- 234
G +H ++K DLF+ NSLI+ Y G A +VF + P D+V+WN+MI+ +
Sbjct: 192 GSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFAL 251
Query: 235 ----------------------------------KNREVGFARELFDFMPERDIFTW--- 257
K ++ F R + ++ E + FT
Sbjct: 252 GGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYI-ENNGFTEHLI 310
Query: 258 --NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
N+M+ YV G + A LF+ M +D+VSW M+DG+AK+GN A FD M +
Sbjct: 311 LNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW 370
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+WN L++ Y + L LF M + DAKP+E +L+ L A A +G ID G WIH
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIH 430
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
YI+K I + L+TSLL MYAKCG ++ A VF + K+V W++MI M+GQG+
Sbjct: 431 VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGK 490
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
AL++F M + PN TF +L AC HAG+V EG F+ M+ +Y I P+++HY C+
Sbjct: 491 AALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCV 550
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VD+ GRAGL+ + + K+P+ A+WGALL ACS H N EL ++ Q+L+ELEP +
Sbjct: 551 VDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNH 610
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRK 613
G +VLLSNIYA G W++V NLR++M++ +++K S + E +V +N P +
Sbjct: 611 GAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQ 670
Query: 614 CIVYSMLGEIGAQMK 628
I YS L EI + K
Sbjct: 671 KI-YSKLDEISEKFK 684
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 333/578 (57%), Gaps = 10/578 (1%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ-E 118
+L + C+ ++ F QIH LL S L + ++ L ++ V F
Sbjct: 12 LLDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWS 71
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
+F CN ++ + P+ A+ Y + FV + YTFP + K CA + E ++
Sbjct: 72 LSSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVP-DVYTFPAVLKSCAKFSGIGEVRQ 130
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
H+ VK G D++V+N+L+H+YS+CG+ + A KVFED V D+V+W +I GYVK
Sbjct: 131 FHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGL 190
Query: 239 VGFARELFDFMP-ERDIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMID 293
A LF M E ++ T+ S++ +G + G+ F + ++V N ++D
Sbjct: 191 FNEAISLFLRMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLD 250
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
Y K +VT AR FD M ++++SW ++ V+C+ E L LF +M +P+
Sbjct: 251 MYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVI 310
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
L SVL+ACA++G++D G+W+H YI RIK DV + T+L+ MYAKCG +D+A+ +F+ M
Sbjct: 311 LTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMP 370
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
KN+ +WN+ I G ++G G++AL+ F ++ + G PN+ TF+ V +AC H G+V EG
Sbjct: 371 SKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRK 430
Query: 474 YFDLMQR-IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF+ M +Y + P +EHYGCMVDLL RAGL+ ++ EL+ +PM + GALLS+ +T
Sbjct: 431 YFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNT 490
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+ N + + + L +E +D G YVLLSN+YA+ KW EV ++RR+MK+K + KA GSS
Sbjct: 491 YGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSS 550
Query: 593 LVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQMKM 629
++ + E +V +N P + I Y +L + Q+ +
Sbjct: 551 IIRVDGMSHEFLVGDNSHPQSEEI-YVLLNILANQIYL 587
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 298/534 (55%), Gaps = 37/534 (6%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFMCN 125
C +++ Q+H + + G D +L ++ +++ + L FD I PD FM N
Sbjct: 18 CRSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYN 77
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKF---VEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
T+++ P A+S Y + V + TFP + + C + + G +VHA
Sbjct: 78 TLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAH 137
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+VK G E D FV+N+LI M++ CG + G A
Sbjct: 138 VVKAGCESDAFVKNALIGMHASCGNL-------------------------------GIA 166
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
LFD D W++MI+G GD+ AA LFD P +D+VSWN MI YAK G++
Sbjct: 167 AALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMA 226
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR FD++ R+VVSWN++++ YVRC + L LF++M R KP+ +++S+L+ACA
Sbjct: 227 LARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACA 286
Query: 363 NMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
+ G +D+GQ +HS + R V+L +L+ MYAKCG M A VF +M +K+V +W
Sbjct: 287 DSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTW 346
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
NS++ G +HG ++++MF +M K P++ TF+ VL AC+H GMV +G +F+LMQ
Sbjct: 347 NSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQH 406
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y++EP ++HYGCMVD+LGRAGL++++ E + + E +W LLSAC H EL K
Sbjct: 407 KYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAK 466
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ L++ + G YVLLSNIYAS G+W E +R++M + + K G + V
Sbjct: 467 HANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFV 520
>gi|147846621|emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
Length = 496
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/461 (43%), Positives = 284/461 (61%), Gaps = 8/461 (1%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+P + K C G VH VK GFE D ++ +SLIH+Y+ ++ A+++F
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTH-VKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 60
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
DLV+WN+MIDGYVK E+G AR +FD M RD+ +WN+MI+GY VG ++ A LFD
Sbjct: 61 SDRDLVSWNAMIDGYVKRGEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFD 120
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
MP R++VS N M+ G+ K GNV A F M R+VVSWN +LA Y +C E L L
Sbjct: 121 EMPERNLVSXNSMLXGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 180
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
FD+M KP+EA+++S+L+ACA++G +D G +H+YI RI+ + ++ T+L+ MYAK
Sbjct: 181 FDQMXAVGVKPSEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAK 240
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG + LA VF+ M K+V++WN++I G + G ++A ++F EM++ G PND TF+ +
Sbjct: 241 CGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAM 300
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
LSAC+HAGMV EG D M Y IEPKVEHYGC++DLL RAGL+ ++ EL+ +PME
Sbjct: 301 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEP 360
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
P GALL C H N ELG++V + L+ L+P G L S I S + + ++
Sbjct: 361 NPCALGALLGGCRIHGNFELGEMVGKRLINLQPCQSGR--LKSAIGXSADTGNXLLDMEE 418
Query: 579 IMKEKEL----EK-AVGSSLVHPGEFASESIVENCPPHRKC 614
KE L EK A+ L+H + IV+N R C
Sbjct: 419 EDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDC 459
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N+++ + P AL+ + ++M A V+ + T L CA + +L +G +H I
Sbjct: 162 NSMLACYAQCGKPNEALALF-DQMXAVGVKPSEATVVSLLSACAHLGALDKGLHLHTYIN 220
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
E++ V +L+ MY+ CG++ A +VF D++ WN++I G V A++
Sbjct: 221 DNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQ 280
Query: 245 LFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGY 295
LF M E + T+ +M+S G ++ L D M V + C+ID
Sbjct: 281 LFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLL 340
Query: 296 AKIGNVTSARNCFDRMCMR 314
A+ G + A M M
Sbjct: 341 ARAGLLEEAMELIGTMPME 359
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 209/600 (34%), Positives = 327/600 (54%), Gaps = 48/600 (8%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L L + +++ + HQIH Q L+ GL + +++ L S+ + D P
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLI-----DLHSIDYARFVLDQTPSP 56
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
F N++++++ + P +L F Y KM+ + +++TFP + K C+ + S+ EG+++
Sbjct: 57 TDFSWNSLIRAYTVHGSPQNSL-FLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQI 115
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +++ GF DLFV NSLI MY C + AR ++D D V+WNS+I GYV+ +V
Sbjct: 116 HTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQV 175
Query: 240 GFARELFDFMP-ERDIFTWNSMISGYVDVGDMEAANGLFDLM------------------ 280
AR+LF+ MP R++ W +MI+GY GD LF M
Sbjct: 176 EKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLL 235
Query: 281 ----------------PFRDV-------VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
F DV + +ID Y+K G+V A FD + +N+
Sbjct: 236 SACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLP 295
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SWN ++ V+ E + L+ M KPNE +L++VL+ACA +G +++G+ +H Y+
Sbjct: 296 SWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYL 355
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ + +V+L+T+L+ MYAKCG +D A +F +EK+V WN+MI+G HG G +L
Sbjct: 356 GRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSL 415
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
+F +M + G PND TFI VLSAC H+G+V EG F M + + PK+EHY CMVDL
Sbjct: 416 AVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDL 475
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG ++++ ELV + + +WGALLSAC H N EL +++ +M + + G
Sbjct: 476 LGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFC 535
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVY 617
+LLSNIYAS G+W +V +RR +KEK ++K G S V +VE+ + +Y
Sbjct: 536 ILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIY 595
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/615 (33%), Positives = 331/615 (53%), Gaps = 40/615 (6%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGI 116
+P+L LE C ++ + QI Q++ +GL ++ FAASR++ S S + I
Sbjct: 58 NPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRI 117
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+E + F N ++ ++ D G Y ++ ++ +++T+PLL K C G S G
Sbjct: 118 KELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLG 177
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
V ++K GFE D+FV N+ I M CGE+ A VF V DLVTWNSMI G VK
Sbjct: 178 LGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 237 -----------------------------------REVGFARELFDFMPERDI-FT---W 257
+++ +E ++ E + FT
Sbjct: 238 GLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
N+++ YV G++ A LFD M + +VSW M+ GYA+ G + AR ++ ++VV
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN +++ V+ K E L LF M +P++ ++++ L+AC+ +G +D+G WIH YI
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
++ ++ DV L T+L+ MYAKCG + A VF+ + ++N ++W ++I G +HG + AL
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
F +M G P++ TF+ VLSAC H G+V EG YF M + + PK++HY CMVDL
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG + ++EELV +PM A A+ GAL AC + N ++G+ A L+E++P+D G Y
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVY 617
VLL+++Y+ W E + R++M +K +EK G SLV E +V + + +Y
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIY 657
Query: 618 SMLGEIGAQMKMCRR 632
L + Q+ + R
Sbjct: 658 ECLVTLTKQLDVIVR 672
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 266/405 (65%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ R ++I Y G + +AR++F++ P ++++W +MI GYV+N +V AR+LF+ MP
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP 229
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E++ +W +M+ GY G +E A+ LFD MP + VV+ N MI G+ + G V AR FD+
Sbjct: 230 EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQ 289
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+ ++ +W+ ++ +Y R E L LF M R + N SL+SVL+ CA++ +D G
Sbjct: 290 IREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHG 349
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H+ + K + DV +++ L+TMY KCG + AR +FD + K++V WNS+I GY H
Sbjct: 350 RQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQH 409
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G E+AL++F EM G + TF+ VLSAC++ G V EG F+ M+ Y +EPK EH
Sbjct: 410 GLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEH 469
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CMVDLLGRAGL+ D+ +L+ K+P+EA +WGALL AC TH N L ++ A+ L++LE
Sbjct: 470 YACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLE 529
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
P++ GPY+LLSNIYAS+G+W +V LRR M+ K++ K+ G S +
Sbjct: 530 PKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIE 574
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 184/369 (49%), Gaps = 46/369 (12%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
NS I Y+ G++ AR+VF++ P +V+WNSM+ GY +N AR LFD MPER+
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN +ISGYV + A FD MP R+VVSW M+ GY + G V+ A F +M +N
Sbjct: 80 SWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKN 139
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VVSW ++L ++ + E LFD M D + A NM I
Sbjct: 140 VVSWTVMLGGLIQVRRIDEARGLFDIMPVKD-----------VVARTNM--------ISG 180
Query: 376 YIQKCRI-----------KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
Y Q+ R+ + +V+ T++++ Y + G +D+AR +F+ M EKN VSW +M+
Sbjct: 181 YCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAML 240
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC--VLSACTHAGMVLEGWWYFDLMQRIY 482
MGY G+ E+A E+F M P A C ++ G V + FD ++
Sbjct: 241 MGYTQGGRIEEASELFDAM------PVKAVVACNAMILGFGQNGEVAKARQVFDQIR--- 291
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL---LSACSTHSNSELG 539
E + M+ + R G ++ L + + E + + +L LS C++ ++ + G
Sbjct: 292 --EKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHG 349
Query: 540 KIVAQHLME 548
+ V L++
Sbjct: 350 RQVHAELVK 358
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 16/257 (6%)
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
+ +NS I Y + ++ AR +FD MP++ I +WNSM++GY A LFD MP R
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+ VSWN +I GY K V+ AR FD M RNVVSW ++ YV+ E LF +M
Sbjct: 77 NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM- 135
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCGV 401
+ N S +L + ID + + I P DV+ T++++ Y + G
Sbjct: 136 ---PEKNVVSWTVMLGGLIQVRRIDEARGLFD------IMPVKDVVARTNMISGYCQEGR 186
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+ AR +FD M +NV+SW +MI GY +GQ + A ++F M P N+ ++ +L
Sbjct: 187 LAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM----PEKNEVSWTAMLMG 242
Query: 462 CTHAGMVLEGWWYFDLM 478
T G + E FD M
Sbjct: 243 YTQGGRIEEASELFDAM 259
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD I+E D + ++K + AL+ + M + V+ N + + VCA + S
Sbjct: 287 FDQIREKDDGTWSAMIKVYERKGFEVEALNLF-ALMQREGVQSNFPSLISVLSVCASLAS 345
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G++VHA +VK F+ D+FV + LI MY CG+++ AR++F+ D+V WNS+I G
Sbjct: 346 LDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITG 405
Query: 233 YVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
Y ++ V A ++F M D T+ ++S G ++ +F+ M + +V
Sbjct: 406 YAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEP 465
Query: 288 ----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ CM+D + G V A + +M + + + W LL
Sbjct: 466 KTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLG 507
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 109/279 (39%), Gaps = 45/279 (16%)
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
R C +++N +A Y R R+FD M P++ G++
Sbjct: 10 RYCTSVAIAYNSQIARYARIGQIESARRVFDEM------PDK-------------GIVSW 50
Query: 370 GQWIHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+ Y Q R + + + L++ Y K ++ AR FD M E+NVV
Sbjct: 51 NSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVV 110
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW +M+ GY G +A +F +M P N ++ +L + E FD+M
Sbjct: 111 SWTAMVRGYVQEGLVSEAETLFWQM----PEKNVVSWTVMLGGLIQVRRIDEARGLFDIM 166
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ + + M+ + G + ++ EL ++P W ++S + +
Sbjct: 167 P-VKDVVARTN----MISGYCQEGRLAEARELFDEMP-RRNVISWTTMISGYVQNGQVD- 219
Query: 539 GKIVAQHLMELEP-RDPGPYVLLSNIYASEGKWDEVENL 576
VA+ L E+ P ++ + + Y G+ +E L
Sbjct: 220 ---VARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASEL 255
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 219/620 (35%), Positives = 337/620 (54%), Gaps = 49/620 (7%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFD 114
++HP+L LESC++ F Q+H L VSGL+ F ASR+L S V +
Sbjct: 36 VTHPLLALLESCASFPRFLQLHALLTVSGLAAHRFPASRLLAFCALSTPPRVDHAAAILA 95
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG---IR 171
P+A+M T+M++FL P A S + +++ + + + T K A
Sbjct: 96 RASAPNAYMLATMMRAFLRARLPSRA-SALFRRVIRESLPADARTLVFAIKAAASEHEHH 154
Query: 172 SLREGKKVHARIVKCG-FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
S G+ VH +K G + V N+L+H Y+ + AR +F++ P D+V+W +++
Sbjct: 155 SPSGGEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLV 214
Query: 231 DGYVKN---------------------REV---------------GFARELFDFMPE--- 251
DGY + EV F R ++ ++ +
Sbjct: 215 DGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGV 274
Query: 252 -RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
R + N++I + G +A +FD M +DV SW M++ YAK G++ SA FD
Sbjct: 275 GRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDD 334
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RN VSW+ ++A Y + E +RLF MI +P A L+SVL+ACA +G +D+G
Sbjct: 335 MPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLG 394
Query: 371 QWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
+WI+ +Y+ + V L + + +YAKCG D A +F M E+NVVSWNSMIM + +
Sbjct: 395 RWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAV 454
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HGQ E+ L +F +++ P++ TF+ +LSAC+H+G+V EG YF M+ IY IEPK E
Sbjct: 455 HGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSE 514
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HY CM+DLLG+ GL+ ++ E+ +PME A WGALL+AC + N E+G+ A L++L
Sbjct: 515 HYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQL 574
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGEFASESIVENC 608
P D G YVL+S IYAS+ KWD+V+ LR +M+E+ ++K G SS+ G+F + +
Sbjct: 575 NPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVS 634
Query: 609 PPHRKCIVYSMLGEIGAQMK 628
H + I Y+ L I +K
Sbjct: 635 HVHSEDI-YAALKNIYFHLK 653
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 206/604 (34%), Positives = 326/604 (53%), Gaps = 43/604 (7%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGI 116
+P+L LE C ++ + QI Q++ +GL ++ FAASR++ S S + I
Sbjct: 58 NPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRI 117
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+E + F N ++ ++ D G Y ++ ++ +++T+PLL K C G S G
Sbjct: 118 KELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLG 177
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
V ++K GFE D+FV N+ I M CGE+ A VF V DLVTWNSMI G VK
Sbjct: 178 LGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 237 -----------------------------------REVGFARELFDFMPERDI-FT---W 257
+++ +E ++ E + FT
Sbjct: 238 GLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
N+++ YV G++ A LFD M + +VSW M+ GYA+ G + AR ++ ++VV
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN +++ V+ K E L LF M +P++ ++++ L+AC+ +G +D+G WIH YI
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
++ ++ DV L T+L+ MYAKCG + A VF+ + ++N ++W ++I G +HG + AL
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
F +M G P++ TF+ VLSAC H G+V EG YF M + + PK++HY CMVDL
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG + ++EELV +PM A A+ GAL AC + N ++G+ A L+E++P+D G Y
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVY 617
VLL+++Y+ W E + R++M +K +EK G SLV E ++ PP+ Y
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVL---PPYDGQFFY 654
Query: 618 SMLG 621
G
Sbjct: 655 PTYG 658
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 339/630 (53%), Gaps = 54/630 (8%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK- 97
P+P + N + ++HP+L LESC++ + Q+ L VSGL+ + F ASR+L
Sbjct: 18 PRPAWNTNCN-----LVVTHPLLSVLESCASFRRLLQLQALLTVSGLASNRFPASRLLAF 72
Query: 98 -KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF-VEH 155
L + + + P+A+M T+M+ FL P AL+ + + + V+
Sbjct: 73 CALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDA 132
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKV 214
F V A S + +H K GF + N+L+HMY+ + DARK+
Sbjct: 133 RTIVF----AVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKL 188
Query: 215 FEDGPVWDLVTWNSMIDGYVKN---------------------REV-------------- 239
F++ D+V+W ++IDGY + EV
Sbjct: 189 FDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGL 248
Query: 240 -GFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
G R + + E + N+++ + G + AA +FD MP +DV SW M+
Sbjct: 249 LGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSA 308
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK G++ +A F + RNVVSW+ ++A Y E +R+F+ MI +P +A+L
Sbjct: 309 YAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATL 368
Query: 355 MSVLTACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+SVL+ACA + +D+G W++ +YI +++ LS + + M+AKCG + A +F NM
Sbjct: 369 VSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNME 428
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+KNVVSWN+MIM +G+HGQ E+AL +F E + G P++AT+I VLSAC+H G+V EG
Sbjct: 429 DKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRC 488
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+F M+ +Y IEP+ EHY CM+DLLG+ GL++++ E+ +P+ A A WGALL+AC H
Sbjct: 489 HFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMH 548
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N E+GK A L L+P D G YVL+S IYAS+ KW +V+ LR +M+++ ++K G S
Sbjct: 549 GNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSS 608
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEI 623
+ E +V + +Y+ LG I
Sbjct: 609 IEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 345/649 (53%), Gaps = 52/649 (8%)
Query: 23 SQKNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESC----STVKEFHQIHT 78
S +N PKT L TD D + I +H + +S +++ I
Sbjct: 32 STRNQPKTTSSL--------ATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISW 83
Query: 79 QLLVSG-LSQDSFAASR---------------VLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
++SG LS D F +R V+ C ++ + L FD + E D
Sbjct: 84 NAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVV 143
Query: 123 MCNTIMKSFLM------LNDPFGAL----SFYYEKMMAKFVEHNHYT-----------FP 161
N ++ + + F + S + M+A +V++ +
Sbjct: 144 SWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWE 203
Query: 162 LLGKVCAGIRSLREGKKVHAR-IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
L+ C ++ + V AR I E D N++I Y+ GE+L+A+++FE+ PV
Sbjct: 204 LISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPV 263
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
D+ TW +M+ GYV+N + AR +FD MPE++ +WN++I+GYV M+ A LF+ M
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM 323
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P ++V SWN MI GYA+ G++ ARN FDRM R+ +SW ++A Y + E L LF
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M R + N ++ S L+ CA + +++G+ +H + K ++ + +LL MY KCG
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+D A VF+ + EK VVSWN+MI GY HG G++AL +F M+K G P+D T + VLS
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H G+V +G YF M + Y I +HY CM+DLLGRAG + D++ L+ +P E
Sbjct: 504 ACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA 563
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
A WGALL A H N+ELG+ A+ + E+EP + G YVLLSN+YA+ G+W +V +R M
Sbjct: 564 ATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRM 623
Query: 581 KEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+++ ++K G S V + + ++ ++ P R I Y+ L E+ +MK
Sbjct: 624 RDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRI-YTFLEELDLKMK 671
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 338/630 (53%), Gaps = 52/630 (8%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK- 97
P P+ N L + +HP+L LESC++ + Q+ L VSGL+ + F ASR+L
Sbjct: 16 PSPRPAWNTNCNLVV---THPLLSVLESCASFRRLLQLQALLTVSGLASNRFPASRLLAF 72
Query: 98 -KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF-VEH 155
L + + + P+A+M T+M+ FL P AL+ + + + V+
Sbjct: 73 CALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDA 132
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKV 214
F V A S + +H K GF + N+L+HMY+ + DARK+
Sbjct: 133 RTIVF----AVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKL 188
Query: 215 FEDGPVWDLVTWNSMIDGYVKN---------------------REV-------------- 239
F++ D+V+W ++IDGY + EV
Sbjct: 189 FDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGL 248
Query: 240 -GFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
G R + + E + N+++ + G + AA +FD MP +DV SW M+
Sbjct: 249 LGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSA 308
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK G++ +A F + RNVVSW+ ++A Y E +R+F+ MI +P +A+L
Sbjct: 309 YAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATL 368
Query: 355 MSVLTACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+SVL+ACA + +D+G W++ +YI +++ LS + + M+AKCG + A +F NM
Sbjct: 369 VSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNME 428
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+KNVVSWN+MIM +G+HGQ E+AL +F E + G P++AT+I VLSAC+H G+V EG
Sbjct: 429 DKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRC 488
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+F M+ +Y IEP+ EHY CM+DLLG+ GL++++ E+ +P+ A A WGALL+AC H
Sbjct: 489 HFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMH 548
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N E+GK A L L+P D G YVL+S IYAS+ KW +V+ LR +M+++ ++K G S
Sbjct: 549 GNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSS 608
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEI 623
+ E +V + +Y+ LG I
Sbjct: 609 IEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/595 (35%), Positives = 325/595 (54%), Gaps = 56/595 (9%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK- 97
P+P + N + ++HP+L LESC++ + Q+H L V+GL+ + F A L
Sbjct: 22 PRPAWNTNRN-----LVVTHPLLSLLESCASFRRLLQLHALLTVTGLAGNGFPAFGFLAF 76
Query: 98 -KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
L T + + P+A+M T+M+ FL P AL + +++ + +
Sbjct: 77 CALSTPPRLAHAAAILARASPGPNAYMLGTMMRGFLRARLPARALGL-FRRVVRDRLPAD 135
Query: 157 HYTFPLLGKVCAGIRSLRE------GKKVHARIVKCGFELD-LFVRNSLIHMYSVCGEVL 209
TF K A G+ +H +KCGF + + V N+L+H Y+ +
Sbjct: 136 ARTFVFAVKAAAAAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLD 195
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF----------------------- 246
DA KVF++ P D+V+W +++DGY + A LF
Sbjct: 196 DAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAI 255
Query: 247 -------------DFMPE----RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
++ E R + N+++ + G + A +FD M +DV SW
Sbjct: 256 GQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWT 315
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M++ YAK G++ SA F M RNVVSW+ ++A Y + E + LF MI P
Sbjct: 316 SMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDP 375
Query: 350 NEASLMSVLTACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
+A+L+SVL+ACA +G +D+G+WI+ +YI +I V L +L+ M+AKCG + A +
Sbjct: 376 IDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKL 435
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M E+NVVSWN+MIM + +HGQ E+A+ +F +++ P+ TF+ +L++C+H+G+V
Sbjct: 436 FDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLV 495
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M+ Y+IEP+VEHY CM+DLLG+ GL+ ++ E+ +PMEA A WGALL+
Sbjct: 496 SEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLN 555
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
AC H N E+G VA L+EL+P D G YVL+S IYAS+ KWD+V+ LR M+++
Sbjct: 556 ACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDR 610
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 300/533 (56%), Gaps = 33/533 (6%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGIQEPDAF 122
L CS++K QIH Q+ +GL D ++L ++S ++ ++ F PD F
Sbjct: 9 LSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDTF 68
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
M NT+++S + P +L + + + + +TF K A R LR G ++H++
Sbjct: 69 MHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQ 128
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+ GF+ +FV +LI MY+ CG+ AR+VF++ ++VTWN+++ + +V A
Sbjct: 129 AFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGA 188
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
+++F MP R++ +WN M++GY G++ A +F MP RD VSW+ MI G+A G
Sbjct: 189 QDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNG--- 245
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
CFD E F ++R + + NE SL VL+ACA
Sbjct: 246 ----CFD------------------------EAFGFFRELLREEIRTNEVSLTGVLSACA 277
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWN 421
G + G+ +H +++K ++ +L+ Y+KCG + +AR VF NM +++VSW
Sbjct: 278 QAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWT 337
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
S+I G MHG GE+A+++F EME+ G P+ TFI +L AC+H+G+V EG F M+ +
Sbjct: 338 SIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNL 397
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y IEP +EHYGCMVDL GRA ++ + E + ++P+ +W LL ACS H N E+ ++
Sbjct: 398 YGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAEL 457
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
V L E++P + G +VLLSN+YA GKW +V ++RR M E ++K G S++
Sbjct: 458 VKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMI 510
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/576 (35%), Positives = 326/576 (56%), Gaps = 46/576 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK-KLCTSLSSVSLSVLFFDGIQEPDAF 122
L+SC ++ + QI + GL QD ++++ + +SL + + F+ I +P F
Sbjct: 15 LKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDPSLF 74
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ N ++K+F+ A+S + +++ V ++YT+P + K I +REG+KVHA
Sbjct: 75 IYNLMIKAFVKSGSFRSAISLF-QQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAF 133
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN------ 236
+VK G E D +V NS + MY+ G V +VFE+ P D V+WN MI GYV+
Sbjct: 134 VVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEA 193
Query: 237 ------------------------------REVGFARELFDFMP-ERDIFT--WNSMISG 263
R + +E+ D++ E D+ T N+++
Sbjct: 194 VDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIASELDLTTIMGNALLDM 253
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
Y G + A +FD M ++V W M+ GY G + ARN F+R R++V W ++
Sbjct: 254 YCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMI 313
Query: 324 ALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
YV+ + E + LF M IRG KP++ ++++LT CA G ++ G+WIH+YI + RI
Sbjct: 314 NGYVQFNRFEETIALFGEMQIRG-VKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRI 372
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
K D ++ T+L+ MYAKCG ++ + +F+ + EK+ SW S+I G M+G+ +ALE+F
Sbjct: 373 KVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKA 432
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M+ G P+D TF+ VLSAC+HAG+V EG F M +Y IEP +EHYGC +DLLGRAG
Sbjct: 433 MQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAG 492
Query: 503 LMRDSEELVSKLPMEAGP---ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
L++++EELV KLP + L+GALLSAC T+ N ++G+ +A L +++ D + L
Sbjct: 493 LLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTL 552
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
L++IYAS +W++V +R MK+ ++K G S +
Sbjct: 553 LASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIE 588
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/617 (33%), Positives = 333/617 (53%), Gaps = 49/617 (7%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS----LSVL 111
+ +L+ L + + Q H +L+ +GLS A+ R+L L + S S
Sbjct: 1 MEQELLRILRTLGSPHHLRQAHARLVAAGLS----ASPRLLPALVAAAFSAHSPRHASAA 56
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLND----PFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
+ NT+++ P AL+ Y M+A V N +TF L + C
Sbjct: 57 LRAAGPAASSVSHNTLIERLAGARGHRPVPADALA-AYTAMLAAGVPPNGFTFTFLLRAC 115
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG---EVLDARKVFEDGPVWDLV 224
A + R + VH +IV+ GF ++FV+N+L+ +Y CG V AR+VF++ D+V
Sbjct: 116 ALLGFPRPCRCVHGQIVRWGFGSEVFVQNTLLDVYYRCGGPGRVAAARQVFDEMVDRDVV 175
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+WNS+I Y+ + + A ELF+ MPER++ +WN++++G+ VGDM A +FD MP R+
Sbjct: 176 SWNSIIGVYMSSGDYTGAMELFEAMPERNVVSWNTLVAGFARVGDMVTAQTVFDRMPSRN 235
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRM--------------------------------C 312
+SWN MI GYA G+V +AR+ FDRM
Sbjct: 236 AISWNLMISGYASSGDVEAARSMFDRMDQKKDVVSWTAMVSAYAKIGDLDTAKELFDHMP 295
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFD-RMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
++N+VSWN ++ Y Y E LR F M+ G +P+EA+L+SV++ACA +G ++
Sbjct: 296 LKNLVSWNAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCN 355
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
WI S+I+K + + L +L+ M+AKCG + A+++F M + +++W +MI G+ +G
Sbjct: 356 WISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNG 415
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+AL ++ M + G +D FI L+AC H G++ EGW F+ M Y I+P++EHY
Sbjct: 416 LCREALLVYNNMCREGVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQYNIQPRMEHY 475
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GC+VDLLGRAG ++++ + +P+E +W LLS+C H N+E V++ + ELEP
Sbjct: 476 GCVVDLLGRAGNLQEAVLFIESMPLEPSVVIWATLLSSCVAHGNAEFIDYVSKKITELEP 535
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH 611
+ VL+SN A EG+WD V R IM+ +EK GSS + G E + ++
Sbjct: 536 FNSSYQVLVSNSSALEGRWDGVIGARTIMRNWGIEKVPGSSSIQVGSEVHEFLAKDTMHE 595
Query: 612 RKCIVYSMLGEIGAQMK 628
R+ +Y + + A M+
Sbjct: 596 RRKEIYETVDGLMALMR 612
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/570 (36%), Positives = 321/570 (56%), Gaps = 16/570 (2%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV--LFFDGIQEPDAFMCNTI 127
+ + QIH Q+L +GL D F AS+++ C+ S SL L F I P ++ CN+I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVA-FCSLQESGSLQYARLVFSQIPNPTSYTCNSI 59
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
++ N AL FY E M+ + + YTFP L K C R+ EGK++H K G
Sbjct: 60 IRGCTDKNLHQEALLFYQEMMVQGLIP-DRYTFPSLFKSC---RNSSEGKQIHCHSTKLG 115
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
F D + +N+L++MYS CG ++ ARKVF+ +V+W +MI + + + A LFD
Sbjct: 116 FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFD 175
Query: 248 FMPERDIFTWNSMISGYV--------DVGDMEAANGLFDLMPF-RDVVSWNCMIDGYAKI 298
M + + N + V D+ ++ + D F R VV ++D Y K
Sbjct: 176 RMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKC 235
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G V AR+ FD+ +N+ SWNI++ +V +Y E L LF M K ++ ++ S+L
Sbjct: 236 GCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLL 295
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
AC ++G +++G+W+H+YI+K RI DV L T+L+ MYAKCG ++ A VF M EK+V+
Sbjct: 296 LACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVM 355
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+W ++I+G M GQ E AL+ F EM +G P+ TF+ VL+AC+HAG V EG +F+ M
Sbjct: 356 TWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSM 415
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
Y I+P +EHYG +VD+LGRAG + ++EEL+ +PM + G LL AC H N E
Sbjct: 416 SDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEA 475
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
+ A+ L+E++P G YVLLSNIY S KW+E + R +M E+ + K G S +
Sbjct: 476 AERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHG 535
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E + + + + ML ++ +++K
Sbjct: 536 VVHEFVKGDSSHRQSSEINEMLEDMISKLK 565
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 156/358 (43%), Gaps = 10/358 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+SC E QIH G + D++A + ++ VS + FD +++
Sbjct: 95 FKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKV-FDKMEDKTVVS 153
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
T++ + P A+ + M ++ V+ N T + CA R L K++H I
Sbjct: 154 WATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYI 213
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+ GF + + L+ +Y CG V AR +F+ +L +WN MI+G+V++ A
Sbjct: 214 DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEAL 273
Query: 244 ELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGY 295
LF M + D T S++ +G +E L + + DV ++D Y
Sbjct: 274 LLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMY 333
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
AK G++ +A F M ++V++W L+ C L+ FD M KP+ + +
Sbjct: 334 AKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFV 393
Query: 356 SVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
VL AC++ G +D G +S I+P + L+ + + G + A + +M
Sbjct: 394 GVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSM 451
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 213/581 (36%), Positives = 329/581 (56%), Gaps = 59/581 (10%)
Query: 60 ILQKLESCS-TVKEFHQIHTQLLVSGLSQ-DSFAASRVLKKLCTSLSSVSL---SVLFFD 114
+ KL + S +VK+ Q+H +L+ GLS + A ++L ++V+ SVL
Sbjct: 6 LFSKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHS 65
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY-----TFPLLG--KVC 167
+ PD+F ++ F +++ A +V+ + TF L K C
Sbjct: 66 --KSPDSFSWACAIR--------FSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKAC 115
Query: 168 AGIRSLREGKKVHARIVKCGFELD---LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
A I G +H ++ K GF ++V +L+ Y G++ ARK+F++ ++V
Sbjct: 116 ARIAYRMGGLSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVV 175
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+WNSM+ GY+K+ ++ A+ +FD +P++D+ +WNSMISGY GDME A LF MP R+
Sbjct: 176 SWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERN 235
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY---C-------- 333
SWN MI GY + G++ SAR+ FD M RN VSW +++ Y +C D C
Sbjct: 236 FASWNAMISGYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGG 295
Query: 334 --------------------ECLRLFDRMIRGD--AKPNEASLMSVLTACANMGVIDIGQ 371
E L+LF+ M+ D +P+E +L SV++AC+ +G + G
Sbjct: 296 KDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGP 355
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
WI SY+++ I+ D L+T+LL +YAKCG +D A +F + +K++V++ +MI+G G++G
Sbjct: 356 WIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGING 415
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ A+++F EM PN TFI +L+A HAG+V EG+ F M++ Y + P V+HY
Sbjct: 416 KAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKK-YNLVPSVDHY 474
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
G MVDL GRAG ++++ EL+ +PM+ +WGALL AC H+N E G+I AQH ELEP
Sbjct: 475 GIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEP 534
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
G LLSNIYAS +WD+V+ LR++ KEK K G S
Sbjct: 535 DTTGYCSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCS 575
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 325/595 (54%), Gaps = 14/595 (2%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
+ L H IL C T +Q + L+ SGL+ +F S +L+ ++ + ++L
Sbjct: 4 LATLRHSILCCFHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLR---SATKDLGYTLLL 60
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + P F+ NTI++SF + P L Y ++ V + +TFPLL K + +R+
Sbjct: 61 FDRLATPYIFLWNTIVRSFSASSQPQMVL-VAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ +A IVK G + D FV+NSL+ ++ CG V +R++F + D+V+W ++I+G
Sbjct: 120 -ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALING 178
Query: 233 YVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
++N A E F M E D T S++ + D+ + V W
Sbjct: 179 CLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW 238
Query: 289 N-----CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+ ++D Y+K G A F+ M RN+VSW L+A YV+C Y E L++F MI
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+PN++++ S LTACA +G +D G+W+H Y+ + ++ + L T+L+ MY+KCG +D
Sbjct: 299 IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A VF+ + K+V W +MI G M G +L +F +M + PN TF+ VLSAC
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V EG F LM Y++EP V+HYGCMVDLLGRAG + ++ + + +PME P +W
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GAL S C H ELG+ + HL++L+P G Y+LL+N+Y+ KW+ N+RR+MK K
Sbjct: 479 GALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGK 538
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQI 638
++K+ S + E I + VY MLG + AQ+K+ + S +
Sbjct: 539 GVDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQLKLATYALDSNL 593
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/511 (39%), Positives = 302/511 (59%), Gaps = 37/511 (7%)
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D F+ N ++KS DP AL F M+ V + ++ L+ K C+ + +EG ++
Sbjct: 49 DPFLWNAVIKSHSHGVDPRQAL-FLLCSMIENNVPVDKFSLSLVTKACSRLGFAKEGMQI 107
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H + K DLF++N LI +Y C + AR+VF+ P D V++NSMIDGYVK +
Sbjct: 108 HGFLTKTVICSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLI 167
Query: 240 GFARELFDFMP----------------------------------ERDIFTWNSMISGYV 265
ARELFD MP E+D+ +WNS+I GYV
Sbjct: 168 ESARELFDLMPKEKKNLISWNSMIGGYAQREDGVDIASKLFAEMPEKDLISWNSLIDGYV 227
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G +E A GLFD+MP RDVV+W MIDGYAK+G V A++ FD M R+VV++N ++
Sbjct: 228 KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPHRDVVAYNSMMGG 287
Query: 326 YVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
YV+ K + E L +F M + P+E +L+ VL+A A +G + IH YI + R
Sbjct: 288 YVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIVEKRFLL 347
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
D L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE A +M ME+E
Sbjct: 348 DGKLGVALIDMYSKCGSIQQAMAVFEGIENKSIDHWNAMIGGLAVHGLGEAAFDMLMEIE 407
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
KR P+ TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMVDLL R+G +
Sbjct: 408 KRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLARSGSI 467
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK-IVAQHLMELEPRDPGPYVLLSNI 563
++ L+S++P+E +W L+ACS H E + +VA++L+ +P YVLLSN+
Sbjct: 468 ELAKHLISEMPIEPNDVIWRTFLNACSHHKEFETRELVVAENLILQAGYNPSSYVLLSNM 527
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YAS W++V +R +MKE+++EK G S +
Sbjct: 528 YASFEMWEDVRRVRTMMKERKIEKVPGCSWI 558
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 16/225 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + D N++M ++ AL +Y+ + + T ++ A +
Sbjct: 269 LFDVMPHRDVVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLG 328
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L + +H IV+ F LD + +LI MYS CG + A VFE + WN+MI
Sbjct: 329 RLSKAVDIHLYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKSIDHWNAMIG 388
Query: 232 GYVKNREVGFARELFDFMPE-------RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
G + G FD + E D T+ +++ G ++ F+LM +
Sbjct: 389 GLAVH---GLGEAAFDMLMEIEKRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRKH 445
Query: 285 VVS-----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILL 323
+ + CM+D A+ G++ A++ M + N V W L
Sbjct: 446 KIEPRLQHYGCMVDLLARSGSIELAKHLISEMPIEPNDVIWRTFL 490
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 309/571 (54%), Gaps = 60/571 (10%)
Query: 27 LPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLS 86
LP T + + P + T L D + I L++C+T Q+H +++ GL
Sbjct: 47 LPMTFIRRYTALTFPDYLPT----LRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLH 102
Query: 87 QDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYE 146
QD F S+ L LC SLS+ S + F+G+ P + NT +K + +S +
Sbjct: 103 QDHFIISQFLT-LCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIR 161
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+ V + +T+P L K C+ + ++EG H V+CG D+FV SLI +Y CG
Sbjct: 162 MKRSDAVP-DKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG 220
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD 266
E+ AR++FD M ER++ +W +MI+GY
Sbjct: 221 -------------------------------EILCARKVFDEMGERNVVSWTAMIAGYAS 249
Query: 267 VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN--VVSWNILLA 324
D+ A LFD MP ++ VSWN +I GY K G++ SAR FD M RN VV+W+ L
Sbjct: 250 FSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSAL-- 307
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
I G+ KP+E ++S+++AC+ MG +++ +W+ Y++K I
Sbjct: 308 ------------------ISGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDV 349
Query: 385 D-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
+ +L+ M AKCG MD A +F+ M +++++S+ SM+ G +HG G +A+ +F M
Sbjct: 350 HRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRM 409
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
G TP+D F +L+AC+ AG+V EG +YF+ M+ Y I P +HY CMVDLLGRAG
Sbjct: 410 LNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGR 469
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
++++ EL+ +P+E WGALL AC H + ELG++VA L ELEP++ G YVLLSNI
Sbjct: 470 LKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNI 529
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YA+ +W +V LR M+E+ + K G S +
Sbjct: 530 YAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 119/286 (41%), Gaps = 29/286 (10%)
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
DY LR FD +S+ ++L AC + + +H+ I + + D + +
Sbjct: 62 DYLPTLRSFD---------TTSSISTLLKACTTTSTL---EQVHARIIRKGLHQDHFIIS 109
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
LT+ +VF+ ++ + V WN+ I GY + + +F+ M++ P
Sbjct: 110 QFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVP 169
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ T+ ++ AC+ V EG + R + V ++DL G+ G + + ++
Sbjct: 170 DKFTYPSLIKACSKVCGVKEGVAFHGSAVRC-GVGGDVFVMTSLIDLYGKCGEILCARKV 228
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG--------PYVLLSN 562
++ E W A+++ ++ S+ + A+ L + P YV +
Sbjct: 229 FDEMG-ERNVVSWTAMIAGYASFSD----LVEARKLFDEMPEKNAVSWNAIISGYVKCGD 283
Query: 563 IYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+ ++ +DE+ + R + A+ S V P EF S++ C
Sbjct: 284 LRSARKMFDEMPHRNR---DVVAWSALISGNVKPDEFIMVSLMSAC 326
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 319/613 (52%), Gaps = 64/613 (10%)
Query: 56 LSHPILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
++H ++ KL + C ++K IH LL+SG S L +L + +VS + FD
Sbjct: 1 MNHSLISKLLKQCRSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFD 60
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
EP++F+ ++ F N A +F+ + V N +T + K + + ++
Sbjct: 61 ETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLN-FTIASVLKAVSRLGRIK 119
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
+G V+ V+CG+E DL V+N +I ++ CGE+ AR++F++ D V+WNSMI GY
Sbjct: 120 DGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYG 179
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYV----------------------------- 265
N V AR+LFD M ER++ +W SMI GYV
Sbjct: 180 NNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSA 239
Query: 266 --DVGDMEAANGLFDLMPFRDVVSWNCMI------------------------------- 292
VG++ AA LF+LMP DV +WN MI
Sbjct: 240 YMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMII 299
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
DGY K+G+V +AR+ FD+M +N+V+W+ ++ Y + L+L+ KP+E
Sbjct: 300 DGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDET 359
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +++AC+ +GV D + + + P++ + TSL+ MYAKCG ++ A VF+ +
Sbjct: 360 FALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMV 419
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+K++ ++++I + HG E A+ +F EM+K P+ F+ VL+AC H G+V EG
Sbjct: 420 DQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGR 479
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M Y I+P +HY CMVD+LGRAG + ++ L+ +P+ +WGALLSAC
Sbjct: 480 RLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRV 539
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N +L + A L ++EP + G YVLL NIYA G+WD+ +R +++E + K GSS
Sbjct: 540 HLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSS 599
Query: 593 LVHPGEFASESIV 605
+ G E ++
Sbjct: 600 WIELGSVIHEFVM 612
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 14/267 (5%)
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQ-KCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
N + + +L C ++ + IH+++ I L LL +Y+K G + A +
Sbjct: 2 NHSLISKLLKQCRSLKTLTT---IHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKL 58
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD E N W ++I G+ + Q E A F++M + P + T VL A + G +
Sbjct: 59 FDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRI 118
Query: 469 LEGWWYFDLMQRI-YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+G + L R Y+ + V++ M++L R G M + ++ ++ E W +++
Sbjct: 119 KDGDLVYGLAVRCGYEFDLVVKN--VMIELFMRCGEMGSARQMFDEME-ERDAVSWNSMI 175
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE- 586
+ + N+ I + +E R+ + + Y G E L M EK+L
Sbjct: 176 TG---YGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLAS 232
Query: 587 -KAVGSSLVHPGEF-ASESIVENCPPH 611
K + S+ + G A+ ++ E P H
Sbjct: 233 WKVMVSAYMSVGNLVAARNLFELMPIH 259
>gi|414587316|tpg|DAA37887.1| TPA: hypothetical protein ZEAMMB73_488455 [Zea mays]
Length = 622
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/535 (35%), Positives = 300/535 (56%), Gaps = 7/535 (1%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAF- 122
L C TV+ Q+H ++++ GL +R C +L S++ F + + A
Sbjct: 89 LGRCCTVRCLAQLHARIILLGLHNHHALLAR-FTTACDALECPSVAASFIAALTDSHAAP 147
Query: 123 --MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N ++ S AL+ + ++ + + ++FP L + CA + L G+ +H
Sbjct: 148 LRLRNAVLASLARHAPLHAALTEF--NLLRQAALPDSFSFPCLLRACARVSCLPAGRALH 205
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A ++ G DLF+R +LI Y CG AR +F + V+W ++I YV N +
Sbjct: 206 AAAIRLGVHADLFIRTALIQFYGRCGVADAARALFYQIDIPSEVSWTAIIVAYVNNGGII 265
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
AR LFD MP+R++ WN M+ GYV GD+E A LFD MP R + +I GYAK GN
Sbjct: 266 DARALFDTMPQRNVVHWNVMVDGYVKCGDLEGARRLFDEMPERTATACTSLIGGYAKAGN 325
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ +AR FD++ R+V SW+ +++ Y + E LR FD P+E ++ +++A
Sbjct: 326 MEAARLLFDKLEDRDVFSWSAMISGYAQNGYPGEALRTFDEFQGQGIHPDELVVVGLMSA 385
Query: 361 CANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
C+ +G I + WI YI K I + + L+ M AKCG ++ A +F++M ++V S
Sbjct: 386 CSQLGNIRLASWIEDYITKYSIDMNNAHVLAGLVNMNAKCGNLERATFLFESMPVRDVFS 445
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
+ S++ GY +HG +KA+++F M G TP++A F VL+AC HAG+V EG +FD+M+
Sbjct: 446 YCSLMQGYCLHGSADKAVKLFSRMLLEGLTPDNAVFTIVLTACCHAGLVEEGKKFFDIMK 505
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+Y + P EHY C+V+LLGR G++ D+ L+ +P + P WGALL C H N ELG
Sbjct: 506 NVYLMVPSGEHYACLVNLLGRCGMLEDAYWLIMSMPGKPHPGAWGALLGGCKLHCNIELG 565
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
KI A+ L E+EP + G YV LSN+YA+ +W +V +R M K + K G +LV
Sbjct: 566 KIAAKKLFEIEPDNAGNYVSLSNMYANIDRWGDVSEVRAEMTGKRITKIAGRTLV 620
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 323/595 (54%), Gaps = 14/595 (2%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
+ L H IL C T Q + L+ SGL+ +F S +L+ ++ + ++L
Sbjct: 4 LATLRHSILCCFHKCGTFDHLKQTTSILITSGLAHHTFFLSDILR---SATKDLGYTLLL 60
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + P F+ NTI++ F + P L Y ++ V + +TFPLL K + +R+
Sbjct: 61 FDRLATPYIFLWNTIIRGFSASSQPQMVL-VAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ +A IVK G + D FV+NSL+ ++ CG V +R++F + D+V+W ++I+G
Sbjct: 120 -ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALING 178
Query: 233 YVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
++N A E F M E D T S++ + D+ + V W
Sbjct: 179 CLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW 238
Query: 289 N-----CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+ ++D Y+K G A F+ M RN+VSW L+A YV+C Y E L++F MI
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+PN++++ S LTACA +G +D G+W+H Y+ + ++ + L T+L+ MY+KCG +D
Sbjct: 299 IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVD 358
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A VF+ + K+V W +MI G M G +L +F +M + PN TF+ VLSAC
Sbjct: 359 EALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA 418
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V EG F LM Y++EP V+HYGCMVDLLGRAG + ++ + + +PME P +W
Sbjct: 419 HGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVW 478
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GAL S C H ELG+ + HL++L+P G Y+LL+N+Y+ KW+ N+RR+MK K
Sbjct: 479 GALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGK 538
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQI 638
++K+ G S + E I + VY ML + AQ+K+ + S +
Sbjct: 539 GVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLATYALDSNL 593
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 322/578 (55%), Gaps = 12/578 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+++ S S ++ ++H ++ G D + L + T S+ + FD + +
Sbjct: 126 VIKACGSQSDLQAGRKVHEDIIARGFESDVIVGT-ALASMYTKCGSLENARQVFDRMPKR 184
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D N I+ + P+ AL+ + E M ++ N T + VCA + +L +GK++
Sbjct: 185 DVVSWNAIIAGYSQNGQPYEALALFSE-MQVNGIKPNSSTLVSVMPVCAHLLALEQGKQI 243
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H ++ G E D+ V N L++MY+ CG V A K+FE P+ D+ +WN++I GY N +
Sbjct: 244 HCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH 303
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDL-----MPFRDVVSWNC 290
A F+ M R I T S++ + +E + DVV N
Sbjct: 304 HEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG-NA 362
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+++ YAK GNV SA F+RM +NVV+WN +++ Y + E L LF M KP+
Sbjct: 363 LVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPD 422
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+++SVL ACA+ ++ G+ IH Y + + +V++ T L+ +YAKCG ++ A+ +F+
Sbjct: 423 SFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFE 482
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M E++VVSW +MI+ YG+HG GE AL +F +M++ G + F +L+AC+HAG+V +
Sbjct: 483 RMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQ 542
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G YF M+ Y + PK+EHY C+VDLLGRAG + ++ ++ + +E +WGALL AC
Sbjct: 543 GLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N ELG+ A+HL EL+P + G YVLLSNIYA +W++V LR++MKEK ++K G
Sbjct: 603 RIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPG 662
Query: 591 SSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
S+V +V + + +Y+ML + QM+
Sbjct: 663 CSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMR 700
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 157/359 (43%), Gaps = 84/359 (23%)
Query: 222 DLVTWNSMIDGYVKN-------------REVGFARELFDFMP------------------ 250
+ V W I GYVKN + G + F+
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 251 --------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
E D+ ++ S Y G +E A +FD MP RDVVSWN +I GY++ G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG--- 200
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+ Y E L LF M KPN ++L+SV+ CA
Sbjct: 201 ---------------------------QPY-EALALFSEMQVNGIKPNSSTLVSVMPVCA 232
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
++ ++ G+ IH Y + I+ DVL+ L+ MYAKCG ++ A +F+ M ++V SWN+
Sbjct: 233 HLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNA 292
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI- 481
+I GY ++ Q +AL F M+ RG PN T + VL AC H + +G Q+I
Sbjct: 293 IIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQG-------QQIH 345
Query: 482 -YKIEPKVEHY----GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
Y I E +V++ + G + + +L ++P + A W A++S S H +
Sbjct: 346 GYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVA-WNAIISGYSQHGH 403
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 319/547 (58%), Gaps = 8/547 (1%)
Query: 53 IVDLSHP----ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL 108
I LSHP + L+ C + +QIH +++ GL QD + + + +S SS+S
Sbjct: 2 IQRLSHPSLLSLETLLKLCKSEIHLNQIHARIIRKGLEQDQ---NLISIFISSSSSSLSY 58
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
S F+ + P ++ N ++K + F +S M F + YTFPL+ KVC+
Sbjct: 59 SSSVFERVPYPGTYLWNHLIKGYSNKFLFFETVSLLMRMMRTGFARPDEYTFPLVMKVCS 118
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
R G VH +++ GF+ D+ + S + Y C ++ ARKVF + P ++V+W +
Sbjct: 119 NNAEFRVGSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTA 178
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
+I YVK+ E+ A+ +FD MPER++ TWN+++ G V GD+ A LFD MP RD++S+
Sbjct: 179 LIVAYVKSGELEEAKRMFDLMPERNLGTWNALVDGLVKSGDLVNARKLFDEMPKRDIISY 238
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
MIDGYAK G++ SAR+ F+ +V +W+ L+ Y + E ++F M + K
Sbjct: 239 TSMIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 298
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLARN 407
P+E ++ +++AC+ MG ++ + + SY+ + K + +L+ M AKCG MD A
Sbjct: 299 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVIPALIDMNAKCGHMDRAAK 358
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F+ M ++++VS+ SM+ G +HG G +A+ +F +M G P++ F +L C+ + +
Sbjct: 359 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIVPDEVAFTVILKVCSQSRL 418
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG YF+LM++ Y I +HY C+V+LL R G ++++ EL+ +P EA + WG+LL
Sbjct: 419 VEEGLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 478
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
CS H N+E+ ++VA+ L ELEP+ G YVLLSNIYA+ +W ++ +LR M E ++K
Sbjct: 479 GGCSLHGNTEIAEVVARQLFELEPQSAGSYVLLSNIYAALDRWADLAHLRDKMNENGIKK 538
Query: 588 AVGSSLV 594
G S +
Sbjct: 539 ICGRSWI 545
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 319/534 (59%), Gaps = 17/534 (3%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF 131
+QI+ +LLV+GL F ++++ K +++ VS + FD +PD F+ N I++ +
Sbjct: 90 HLNQIYAKLLVTGLQYGGFLIAKLVNK-ASNIGEVSCARKLFDKFPDPDVFLWNAIVRCY 148
Query: 132 LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD 191
+ FG Y +M V + ++FP + K C+ + +L G++VH +I + GFE D
Sbjct: 149 -SRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESD 207
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+FV+N L+ +Y+ CGE++ A VF +V+W S+I GY +N + A +F M +
Sbjct: 208 VFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRK 267
Query: 252 RDIFT-WNSMIS---GYVDVGDMEAANGLFDLM-------PFRDVVSWNCMIDGYAKIGN 300
++ W +++S Y DV D+E + + F ++S + YAK G+
Sbjct: 268 TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSL---YAKCGH 324
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
V AR F+++ +++ WN +++ YV+ E + LF M + +P+ ++ S + A
Sbjct: 325 VMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAA 384
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
CA +G +++ +W+ YI + DV+++TSL+ YAKCG +D+AR VFD + +K+VV W
Sbjct: 385 CAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVW 444
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
++M++GYG+HGQG +++ +F M + G +PND TF+ +L+AC ++G+V EGW F M R
Sbjct: 445 SAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-R 503
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y IEP+ +HY C+VDLLGRAG + + V +P+E G ++WGALLSAC H + LG+
Sbjct: 504 DYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGE 563
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A+ L L+P + G YV LSN+YAS WD V +R +M+EK L K +G S++
Sbjct: 564 YAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVI 617
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/543 (35%), Positives = 298/543 (54%), Gaps = 33/543 (6%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGI 116
H L L SC ++ QIH + G+ DS+ +++ S+S ++ +
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
EPDAFM NT+++ + ++P +++ + E M FV + ++F + K RSLR G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
++H + +K G E LFV +LI MY CG V
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCV---------------------------- 157
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
FAR++FD M + ++ WN++I+ D+ A +FD M R+ SWN M+ GY
Sbjct: 158 ---EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G + SA+ F M R+ VSW+ ++ + E F + R PNE SL
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL+AC+ G + G+ +H +++K V ++ +L+ MY++CG + +AR VF+ M EK
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 417 -VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VSW SMI G MHGQGE+A+ +F EM G TP+ +FI +L AC+HAG++ EG YF
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
M+R+Y IEP++EHYGCMVDL GR+G ++ + + + ++P+ +W LL ACS+H N
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
EL + V Q L EL+P + G VLLSN YA+ GKW +V ++R+ M + ++K SLV
Sbjct: 455 IELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
Query: 596 PGE 598
G+
Sbjct: 515 VGK 517
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 322/537 (59%), Gaps = 9/537 (1%)
Query: 97 KKLCTSLSSVSLSV---LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
K L S S+V + LF Q D+F+ N+++K++L + + Y +
Sbjct: 15 KFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCF 74
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+++TF L K C+ + +G ++H++I + GF D++V ++ MY+ G++ AR
Sbjct: 75 APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-RDIFTWNSMISGYVDVGDMEA 272
F++ P V+W ++I GY++ E+ A +LFD MP +D+ +N+M+ G+V GDM +
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTS 194
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A LFD M + V++W MI GY I ++ +AR FD M RN+VSWN ++ Y + K
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQP 254
Query: 333 CECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E +RLF M + P++ +++SVL A ++ G + +G+W H ++Q+ ++ V + T+
Sbjct: 255 QEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
+L MY+KCG ++ A+ +FD M EK V SWN+MI GY ++G AL++F+ M P+
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPD 373
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
+ T + V++AC H G+V EG +F +M+ + + K+EHYGCMVDLLGRAG ++++E+L+
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+ +P E + + LSAC + + E + + + +ELEP++ G YVLL N+YA++ +WD
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 572 EVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQM 627
+ ++ +M++ + +K VG SL+ SE I + PHR+ I + +LG++ M
Sbjct: 493 DFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI-HLVLGDLLMHM 548
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 200/577 (34%), Positives = 333/577 (57%), Gaps = 19/577 (3%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVL 111
V+ SH + E CS+++ +H Q+++ GL+ ++ +++ C + +
Sbjct: 111 VNGSHCPARLCEKCSSMRGLKLLHAQIILHGLTNETLTLGKLIS-FCAVDDAGDLQYAQR 169
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I +P+ FM N++++ + +DP A+ + +M+ + N +T P + K C
Sbjct: 170 MFDQIPQPNKFMYNSLIRGYSNSDDPIDAV-LLFRRMICSGLSPNEFTLPFVLKACGCKS 228
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+ E VH +K G +FV+N+LI +Y VCG + ARK+F+D LV+WNSMI+
Sbjct: 229 AYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIE 288
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
+ ++ DI N++ Y G++ +A +FD ++VVSW M
Sbjct: 289 --ITGVKI-------------DIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSM 333
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I YA+ G++ AR FD+M +NVVSWN +++ Y+R Y E L LF++M P+E
Sbjct: 334 ISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDE 393
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
A+L+S+L AC+ +G + +G+ IH+YI + V L SL+ MYAKCG + A ++F
Sbjct: 394 ATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLE 453
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M KN+VSWN +I +HG G +A+++F EM+ G P++ T +LSAC+H+G+V G
Sbjct: 454 MPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 513
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+YFD M IY++ ++EHY CMVDLLGR GL+ ++ EL+ ++PM+ +WGALL AC
Sbjct: 514 LYYFDRMGVIYRVXREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACR 573
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H N E+GK + + L+ELEP G YVL+SNIY +W++V+ +R++M ++ ++K
Sbjct: 574 IHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAI 633
Query: 592 SLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
S + E +V++ +Y+ML ++ ++
Sbjct: 634 SSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLR 670
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 275/441 (62%), Gaps = 2/441 (0%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D N++I Y+ GE+L+A+++FE+ PV D+ TW +M+ GYV+N + AR +FD
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPE++ +WN++I+GYV M+ A LF+ MP ++V SWN MI GYA+ G++ ARN F
Sbjct: 211 MPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFF 270
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
DRM R+ +SW ++A Y + E L LF M R + N ++ S L+ CA + ++
Sbjct: 271 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 330
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+G+ +H + K ++ + +LL MY KCG +D A VF+ + EK VVSWN+MI GY
Sbjct: 331 LGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYA 390
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG G++AL +F M+K G P+D T + VLSAC+H G+V +G YF M + Y I
Sbjct: 391 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANS 450
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY CM+DLLGRAG + D++ L+ +P E A WGALL A H N+ELG+ A+ + E
Sbjct: 451 KHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 510
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVEN 607
+EP + G YVLLSN+YA+ G+W +V +R M+++ ++K G S V + + ++ ++
Sbjct: 511 MEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDS 570
Query: 608 CPPHRKCIVYSMLGEIGAQMK 628
P R I Y+ L E+ +MK
Sbjct: 571 VHPERDRI-YTFLEELDLKMK 590
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 164/316 (51%), Gaps = 20/316 (6%)
Query: 230 IDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
+ G V+ R + AR LFD MPERD+ +WN+M+SGY G ++ A +FD MP ++ +SWN
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWN 96
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M+ Y + G + AR F+ ++SWN ++ YV+ + +FDRM D
Sbjct: 97 GMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERD--- 153
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
E S ++++ A G + Q + ++ ++ DV T++++ Y + G++D AR VF
Sbjct: 154 -EVSWNTMISGYAQNGELLEAQRL---FEESPVR-DVFTWTAMVSGYVQNGMLDEARRVF 208
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D M EKN VSWN++I GY + ++A E+F M P N +++ +++ G +
Sbjct: 209 DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM----PCQNVSSWNTMITGYAQNGDIA 264
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA---GPALWGAL 526
+ +FD M + I + ++ ++G ++ L ++ + + + +
Sbjct: 265 QARNFFDRMPQRDSIS-----WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTST 319
Query: 527 LSACSTHSNSELGKIV 542
LS C+ + ELGK V
Sbjct: 320 LSTCAEIAALELGKQV 335
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 104/233 (44%), Gaps = 31/233 (13%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-------NHYTFPLLG 164
FFD + + D+ I+ + A S Y E+ + FVE N TF
Sbjct: 269 FFDRMPQRDSISWAAIIAGY--------AQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 320
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
CA I +L GK+VH R+VK G E +V N+L+ MY CG + DA VFE ++V
Sbjct: 321 STCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVV 380
Query: 225 TWNSMIDGYVKNREVGFARE---LFDFMPERDIFTWNSMI---------SGYVDVGDMEA 272
+WN+MI GY ++ GF +E LF+ M + I + + +G VD G
Sbjct: 381 SWNTMIAGYARH---GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF 437
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ D + + CMID + G + A+N M + +W LL
Sbjct: 438 YSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/496 (37%), Positives = 283/496 (57%), Gaps = 36/496 (7%)
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF---VEHNHYTFP 161
+++ + L FD I PD FM NT+++ P A+S Y + V + TFP
Sbjct: 27 AIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFP 86
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
+ + C + + G +VHA +VK G E D FV+N+LI M++ CG +
Sbjct: 87 FVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNL------------- 133
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
G A LFD D W++MI+G GD+ AA LFD P
Sbjct: 134 ------------------GIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECP 175
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
+D+VSWN MI YAK G++ AR FD++ R+VVSWN++++ YVRC + L LF++
Sbjct: 176 VKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQ 235
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKC 399
M R KP+ +++S+L+ACA+ G +D+GQ +HS + R V+L +L+ MYAKC
Sbjct: 236 MQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKC 295
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G M A VF +M +K+V +WNS++ G +HG ++++MF +M K P++ TF+ VL
Sbjct: 296 GSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVL 355
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
AC+H GMV +G +F+LMQ Y++EP ++HYGCMVD+LGRAGL++++ E + + E
Sbjct: 356 IACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPN 415
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+W LLSAC H EL K + L++ + G YVLLSNIYAS G+W E +R++
Sbjct: 416 SVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKL 475
Query: 580 MKEKELEKAVGSSLVH 595
M + + K S +H
Sbjct: 476 MDDSGVNKEADSERLH 491
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 297/540 (55%), Gaps = 33/540 (6%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGIQEP 119
L L SC ++ QIH + G+ DS+ +++ S+S ++ + EP
Sbjct: 1 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 60
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
DAFM NT+++ + ++P +++ + E M FV + ++F + K RSLR G ++
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H + +K G E LFV +LI MY CG V
Sbjct: 121 HCQALKHGLESHLFVGTTLIGMYGGCGCV------------------------------- 149
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
FAR++FD M + ++ WN++I+ D+ A +FD M R+ SWN M+ GY K G
Sbjct: 150 EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAG 209
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ SA+ F M R+ VSW+ ++ + E F + R PNE SL VL+
Sbjct: 210 ELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLS 269
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN-VV 418
AC+ G + G+ +H +++K V ++ +L+ MY++CG + +AR VF+ M EK +V
Sbjct: 270 ACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 329
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW SMI G MHGQGE+A+ +F EM G TP+ +FI +L AC+HAG++ EG YF M
Sbjct: 330 SWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM 389
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+R+Y IEP++EHYGCMVDL GR+G ++ + + + ++P+ +W LL ACS+H N EL
Sbjct: 390 KRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIEL 449
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
+ V Q L EL+P + G VLLSN YA+ GKW +V ++R+ M + ++K SLV G+
Sbjct: 450 AEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGK 509
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 328/581 (56%), Gaps = 59/581 (10%)
Query: 60 ILQKLESCS-TVKEFHQIHTQLLVSGLSQ-DSFAASRVLKKLCTSLSSVSL---SVLFFD 114
+ KL + S +VK+ Q+H +L+ GLS + A ++L ++V+ SVL
Sbjct: 6 LFSKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILISASNYSATVAQYVHSVLHHS 65
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY-----TFPLLG--KVC 167
+ PD+F ++ F +++ A +V+ + TF L K C
Sbjct: 66 --KSPDSFSWACAIR--------FSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKAC 115
Query: 168 AGIRSLREGKKVHARIVKCGFELD---LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
A I G +H ++ K GF ++V +L+ Y G++ ARK+F++ ++V
Sbjct: 116 ARIAYRMGGISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVV 175
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+WNSM+ GY+K+ ++ A+ +FD +P++D+ +WNSMISGY GDME A+ LF MP R+
Sbjct: 176 SWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERN 235
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
SWN MI G+ + G++ SAR+ FD M +N VSW +++ Y +C D LFD++
Sbjct: 236 FASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGG 295
Query: 345 GD--------------AKPNEA-------------------SLMSVLTACANMGVIDIGQ 371
D ++PNEA +L SV++AC+ +G + G
Sbjct: 296 KDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGP 355
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
WI SY+++ I+ D L+T+LL +YAKCG +D A +F + +K++V++ +MI+G G++G
Sbjct: 356 WIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGING 415
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ A+++F EM PN TFI +L+A HAG+V EG+ F M++ Y + P V+HY
Sbjct: 416 KAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSVDHY 474
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
G MVDL GRAG ++++ EL+ +PM+ +WGALL AC H+N E G+I AQH ELEP
Sbjct: 475 GIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEP 534
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
G LLSNIYAS +WD+V+ LR++ KEK K G S
Sbjct: 535 DTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCS 575
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/481 (39%), Positives = 285/481 (59%), Gaps = 13/481 (2%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N +++ + N PF +++M + ++ +++T+P + C + GK+VH IV
Sbjct: 23 NAMIRGY-AFNGPFQECIRMFDEMPQRGLKPHNFTYPYVINSCCELEWYGRGKRVHCEIV 81
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLD-----------ARKVFEDGPVWDLVTWNSMIDGY 233
K GFE V NSL +MY D ARK+F+D V + WN MI Y
Sbjct: 82 KSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKIFDDMCVRPVELWNQMIGKY 141
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
V +V ARELFD MPERDI +WNSMI GY G + A GLF+ MP ++V+SW MI
Sbjct: 142 VNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVANARGLFEKMPEKNVISWTSMIG 201
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
YA ++ +AR+ F+ M RNVVSWN +++ Y + + E L LF +M P+ +
Sbjct: 202 AYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYT 261
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+SVL+AC+N+G ++ G++IH Y+ + +V++ T+L MYA+CG +D A VF +
Sbjct: 262 FVSVLSACSNLGDLEFGKYIH-YLSGDLSQSEVMVGTALTEMYAQCGDVDKAFAVFIKIG 320
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+++V WN +I +HG+ E+A+++F+ M K G PND TF L AC+H G+V EG
Sbjct: 321 KRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHI 380
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
F+ M++ YKI PK+ HYGC++D+L R G + ++ LV +P + A+WGALL C
Sbjct: 381 IFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGGCRVT 440
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
+ +L + V + E+E + G YVLLSNI+AS G+W E + R+ M EK++ K GSS+
Sbjct: 441 GDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWIEAADARKKMDEKKISKKTGSSV 500
Query: 594 V 594
V
Sbjct: 501 V 501
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 118/302 (39%), Gaps = 54/302 (17%)
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+V WN ++ Y + EC+R+FD M + KP+ + V+ +C + G+ +H
Sbjct: 19 IVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYVINSCCELEWYGRGKRVHC 78
Query: 376 YIQKCRIKPDVLLSTSLLTMYAK------------------------------------- 398
I K + ++ SL MY K
Sbjct: 79 EIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKIFDDMCVRPVELWNQMI 138
Query: 399 -----CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
G + AR +FD M E+++VSWNSMI+GY G+ A +F +M P N
Sbjct: 139 GKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVANARGLFEKM----PEKNVI 194
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
++ ++ A + +F+ M + V + M+ + G +S L +
Sbjct: 195 SWTSMIGAYADTDDLETARSFFETMP-----QRNVVSWNSMISSYAKHGKFVESLNLFVQ 249
Query: 514 LPMEA---GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ E + ++LSACS + E GK + +L + L+ +YA G
Sbjct: 250 MQSEGVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLSQSEVMVGTALTEMYAQCGDV 309
Query: 571 DE 572
D+
Sbjct: 310 DK 311
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 402 MDLARNVFDNM---TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
MD + +F M + +V WN+MI GY +G ++ + MF EM +RG P++ T+ V
Sbjct: 1 MDYSNLIFSQMGHDSSAEIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYV 60
Query: 459 LSAC 462
+++C
Sbjct: 61 INSC 64
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 275/423 (65%), Gaps = 1/423 (0%)
Query: 173 LREGKKVHA-RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L+EG+ A R+ E D+ R ++I Y G +++AR +F++ P ++V+W +MI
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
GYV+N++V AR+LF+ MPE++ +W +M+ GY + G ++ A+ LF+ MP + VV+ N M
Sbjct: 293 GYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAM 352
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I + + G V AR FD+M ++ +W+ ++ +Y R + L LF M R +PN
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
SL+SVL+ CA + +D G+ IH+ + + + DV +++ LL+MY KCG + A+ VFD
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
K+VV WNS+I GY HG G +AL +F +M G P+D TF+ VLSAC++ G V +G
Sbjct: 473 FAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKG 532
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F+ M+ Y++E K+EHY CMVDLLGRAG + ++ +L+ K+PMEA +WGALL AC
Sbjct: 533 LEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACR 592
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
TH +L ++ A+ L+ LEP++ GP++LLSNIYAS+G+WD+V LRR M+++ + K G
Sbjct: 593 THMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGC 652
Query: 592 SLV 594
S +
Sbjct: 653 SWI 655
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 188/363 (51%), Gaps = 28/363 (7%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+ RNSLI YS G++ AR VF++ ++++WNS++ GY +N+ A+ +FD M E
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R+ +WN ++SGY++ G + A +FD MP R+VVSW M+ GY K G ++ A F +M
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM--GVIDI 369
+NVVSW ++L ++ E RLFD M D + NM G +
Sbjct: 218 PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD-----------VVTRTNMIGGYCQV 266
Query: 370 GQWIHSYIQKCRI-KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ + + + + + +V+ T+++T Y + +D+AR +F+ M EKN VSW +M+ GY
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
G+ ++A E+F M + +A +C G V + FD M+ E
Sbjct: 327 NCGRLDEASELFNAMPIKSVVACNAMILCF----GQNGEVPKARQVFDQMR-----EKDE 377
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEA----GPALWGALLSACSTHSNSELGKIVAQ 544
+ M+ + R GL D+ EL + E P+L ++LS C+ +N + G+ +
Sbjct: 378 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLI-SVLSVCAGLANLDHGREIHA 436
Query: 545 HLM 547
L+
Sbjct: 437 QLV 439
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV---CAG 169
FD ++E D + ++K + AL + +MM + E FP L V CAG
Sbjct: 369 FDQMREKDEGTWSAMIKVYERKGLELDALELF--RMMQR--EGIRPNFPSLISVLSVCAG 424
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ +L G+++HA++V+ F+LD++V + L+ MY CG + A++VF+ V D+V WNS+
Sbjct: 425 LANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI 484
Query: 230 IDGYVKNREVGFARELFD------FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
I GY ++ A +F MP D T+ ++S G+++ +F+ M +
Sbjct: 485 ITGYAQHGLGVEALRVFHDMHFSGIMP--DDVTFVGVLSACSYTGNVKKGLEIFNSMETK 542
Query: 284 -----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ + CM+D + G + A + ++M M + + W LL
Sbjct: 543 YQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLG 589
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 275/423 (65%), Gaps = 1/423 (0%)
Query: 173 LREGKKVHA-RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L+EG+ A R+ E D+ R ++I Y G +++AR +F++ P ++V+W +MI
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
GYV+N++V AR+LF+ MPE++ +W +M+ GY + G ++ A+ LF+ MP + VV+ N M
Sbjct: 293 GYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAM 352
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I + + G V AR FD+M ++ +W+ ++ +Y R + L LF M R +PN
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
SL+SVL+ CA + +D G+ IH+ + + + DV +++ LL+MY KCG + A+ VFD
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
K+VV WNS+I GY HG G +AL +F +M G P+D TF+ VLSAC++ G V +G
Sbjct: 473 FAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKG 532
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F+ M+ Y++E K+EHY CMVDLLGRAG + ++ +L+ K+PMEA +WGALL AC
Sbjct: 533 LEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACR 592
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
TH +L ++ A+ L+ LEP++ GP++LLSNIYAS+G+WD+V LRR M+++ + K G
Sbjct: 593 THMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGC 652
Query: 592 SLV 594
S +
Sbjct: 653 SWI 655
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 188/363 (51%), Gaps = 28/363 (7%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+ RNSLI YS G++ AR VF++ ++++WNS++ GY +N+ A+ +FD M E
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R+ +WN ++SGY++ G + A +FD MP R+VVSW M+ GY K G ++ A F +M
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM--GVIDI 369
+NVVSW ++L ++ E RLFD M D + NM G +
Sbjct: 218 PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD-----------VVTRTNMIGGYCQV 266
Query: 370 GQWIHSYIQKCRI-KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ + + + + + +V+ T+++T Y + +D+AR +F+ M EKN VSW +M+ GY
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
G+ ++A E+F M + +A +C G V + FD M+ E
Sbjct: 327 NCGRLDEASELFNAMPIKSVVACNAMILCF----GQNGEVPKARQVFDQMR-----EKDE 377
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEA----GPALWGALLSACSTHSNSELGKIVAQ 544
+ M+ + R GL D+ EL + E P+L ++LS C+ +N + G+ +
Sbjct: 378 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLI-SVLSVCAGLANLDHGREIHA 436
Query: 545 HLM 547
L+
Sbjct: 437 QLV 439
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV---CAG 169
FD ++E D + ++K + AL + +MM + E FP L V CAG
Sbjct: 369 FDQMREKDEGTWSAMIKVYERKGLELDALELF--RMMQR--EGIRPNFPSLISVLSVCAG 424
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ +L G+++HA++V+ F+LD++V + L+ MY CG + A++VF+ V D+V WNS+
Sbjct: 425 LANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI 484
Query: 230 IDGYVKNREVGFARELFD------FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
I GY ++ A +F MP D T+ ++S G+++ +F+ M +
Sbjct: 485 ITGYAQHGLGVEALRVFHDMHFSGIMP--DDVTFVGVLSACSYTGNVKKGLEIFNSMETK 542
Query: 284 -----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ + CM+D + G + A + ++M M + + W LL
Sbjct: 543 YQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLG 589
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/529 (36%), Positives = 287/529 (54%), Gaps = 41/529 (7%)
Query: 141 LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
L Y + + +H TFP L K CA +R G A +++ G + D+FV N+ H
Sbjct: 109 LPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATH 168
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPERDI 254
S+ G + DAR++F+ PV DLV+WN++I GYV+ A ELF D + D
Sbjct: 169 FLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDE 228
Query: 255 FTWNSMISG-----------------------------------YVDVGDMEAANGLFDL 279
T + +SG Y+ G +E A +F+
Sbjct: 229 VTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFER 288
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ R VVSW MI G+AK G + AR FD M R+V WN L+ YV+CK E L LF
Sbjct: 289 IEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLF 348
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
M P+E +++++LTAC+ +G +++G W+H YI+K R+ V L TSL+ MYAKC
Sbjct: 349 HEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKC 408
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G ++ A ++F + EKN ++W +MI G HG +A+E F M + G P++ TFI VL
Sbjct: 409 GNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVL 468
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC HAG+V EG +F LM+ Y +E K++HY CM+DLLGRAG + ++E+LV+ +PME
Sbjct: 469 SACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPD 528
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+WGA+ AC N LG+ A L+E++P D G YVLL+N+YA + + +R +
Sbjct: 529 AVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAM 588
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
M+ +EK G S + E IV++ +Y L EI Q+K
Sbjct: 589 MRHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIK 637
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 58/454 (12%)
Query: 56 LSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
L+ P L L++C+ ++E+ +L GL D F + L + +
Sbjct: 126 LTFPFL--LKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIR-GPMEDARRL 182
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAK--FVEHNHYTFPLLGKVCAGI 170
FD D NT++ ++ +P AL ++ +M+A+ V + T C +
Sbjct: 183 FDRSPVRDLVSWNTLIGGYVRRGNPAEALELFW-RMVAEDAVVRPDEVTMIAAVSGCGQM 241
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
R L G+++H + G + + N+L+ MY CG + A+ VFE +V+W +MI
Sbjct: 242 RDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMI 301
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS--- 287
G+ K + AR++FD MPERD+F WN++++GYV + A LF M VV
Sbjct: 302 VGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEI 361
Query: 288 -------------------W-----------------NCMIDGYAKIGNVTSARNCFDRM 311
W +ID YAK GN+ A + F +
Sbjct: 362 TMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEI 421
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
+N ++W ++ E + F MI KP+E + + VL+AC + G++ G+
Sbjct: 422 PEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGR 481
Query: 372 WIHSYIQ-KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGM 429
S ++ K ++ + + ++ + + G +D A + + M E + V W ++ M
Sbjct: 482 EFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRM 541
Query: 430 HGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
G GEKA +E++ P+D+ +L+
Sbjct: 542 QGNISLGEKAAMKLVEID-----PSDSGIYVLLA 570
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 306/549 (55%), Gaps = 40/549 (7%)
Query: 85 LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY 144
L D ++K S S++ + F I P N +++ + + + P A+ Y
Sbjct: 6 LRTDPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMY 65
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
M + + N+ T+ L K CA + + G +HAR++K GFE L+V N+LI+MY
Sbjct: 66 -NLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGS 124
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGY---VKNREV---------------------- 239
CG + A+KVF++ P DLV+WNS++ GY + REV
Sbjct: 125 CGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKV 184
Query: 240 ----------GFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
G A + D++ E D++ N++I Y G + A G+FD M +R++
Sbjct: 185 VLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNL 244
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
VSWN MI GY K GN+ +AR FD M R+V+SW ++ Y + + E LRLF M+
Sbjct: 245 VSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMES 304
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
KP+E ++ SVL+ACA+ G +D+G+ H YIQK +K D+ + +L+ MY KCGV++ A
Sbjct: 305 KVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKA 364
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
VF M +K+ VSW S+I G ++G + AL+ F M + P+ F+ +L AC HA
Sbjct: 365 LEVFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHA 424
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V +G YF+ M+++Y ++P+++HYGC+VDLL R+G ++ + E + ++P+ +W
Sbjct: 425 GLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRI 484
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LLSA H N L +I + L+EL+P + G YVL SN YA +W++ +R +M++ +
Sbjct: 485 LLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNV 544
Query: 586 EKAVGSSLV 594
+K GSS +
Sbjct: 545 QKPSGSSCI 553
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 321/537 (59%), Gaps = 9/537 (1%)
Query: 97 KKLCTSLSSVSLSV---LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
K L S S+V + LF Q D+F+ N+++K++L + + Y +
Sbjct: 15 KFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCF 74
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+++TF L K C+ + +G ++H++I + GF D++V ++ MY+ G++ AR
Sbjct: 75 APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-RDIFTWNSMISGYVDVGDMEA 272
F++ P V+W ++I GY++ E+ A +LFD MP +D+ +N+M+ G+V GDM +
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTS 194
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A LFD M + V++W MI GY I ++ +AR FD M RN+VSWN ++ Y + K
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQP 254
Query: 333 CECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E + LF M + P++ +++SVL A ++ G + +G+W H ++Q+ ++ V + T+
Sbjct: 255 QEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
+L MY+KCG ++ A+ +FD M EK V SWN+MI GY ++G AL++F+ M P+
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPD 373
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
+ T + V++AC H G+V EG +F +M+ + + K+EHYGCMVDLLGRAG ++++E+L+
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+ +P E + + LSAC + + E + + + +ELEP++ G YVLL N+YA++ +WD
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 572 EVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQM 627
+ ++ +M++ + +K VG SL+ SE I + PHR+ I + +LG++ M
Sbjct: 493 DFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI-HLVLGDLLMHM 548
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 216/605 (35%), Positives = 337/605 (55%), Gaps = 36/605 (5%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG--LSQDSFAASRVLKKLCTSLSSVSL 108
L + L H L+ C+++ IH+ L G L F A ++ L + L +
Sbjct: 19 LALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLII--LYSKLGDLHS 76
Query: 109 SVLFFDG--------IQEPDAFMCNTIMKSFLMLNDPFGALSFY-YEKMMAKFVEHNHYT 159
+ FD Q P++F+CNT+++++ + A+ Y Y + M V N++T
Sbjct: 77 ARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGV--NNFT 134
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+P + KVCA G+ VH ++V+ GF DLFV +L+ MY+ CGE+ DA +VF+
Sbjct: 135 YPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRML 194
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAA-- 273
+ D+V W +MI Y + A LF M E D T S+ S +GD A
Sbjct: 195 IRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAIS 254
Query: 274 -NGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+G L F DV N ++ YAK GNV AR FDRM RN +SWN +L+ Y +
Sbjct: 255 VHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGR 314
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
+ L LF++M + PN + + +++AC+ +G +G+ +H+++ ++ D L +
Sbjct: 315 PTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNA 374
Query: 392 LLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
++ MY KCG +D A +F+N + E++V SWN +I GYG+HG G++ALE+F M+ G
Sbjct: 375 IMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVE 434
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
PND TF +LSAC+HAG++ EG F M ++ + P+++HY CMVD+LGRAG + ++
Sbjct: 435 PNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFR 493
Query: 510 LVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGK 569
L+ K+P +WGALL AC H N+ELG+I A +L +LEP G YVL+SNIYA+ K
Sbjct: 494 LIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNK 553
Query: 570 WDEVENLRRIMKEKELEKAVGSSLVHPGEFASE-----SIVENCPPHRKCIVYSMLGEIG 624
W EVE +R+ MK + L+K S++ EF +E + ++ P +R+ VY + +
Sbjct: 554 WKEVEMVRQNMKSRGLKKPAAFSVI---EFGTEVHGFHTADQSSPYYRE--VYRKVESLA 608
Query: 625 AQMKM 629
+MKM
Sbjct: 609 IEMKM 613
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 326/576 (56%), Gaps = 17/576 (2%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAFMCN 125
C+++ + Q H LL + L + +S+++ L S S ++ + F +Q PD F+CN
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
T+++ + +P+ A+S YY M+ + V ++YT+P + CA + +++ G++ H ++K
Sbjct: 81 TMIRGYARSQNPYEAVSLYY-FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
GF DLFV N+LI Y CG A VF++ V D+VTWN MI+ ++ G + +
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNK---GLSEKA 196
Query: 246 FDFMPER--------DIFTWNSMISGYVDVGDMEAANGLF----DLMPFRDVVSWNCMID 293
FD + E D T S++ +G++E L +L ++ N ++D
Sbjct: 197 FDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILD 256
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
Y K ++ SA+ F+R+ ++V+SW +L+ + + E L LF +M + +E +
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
L+ VL+ACA G +D G++IH I K I D++L T+L+ MYAKCG +DLA VF M
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 376
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+NV +WN++I G MHG GE A+ +F +ME P+D TFI +L AC+HAG+V EG
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLA 436
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
F M+ ++IEP++EHYGC+VDLL RA + D+ + +P++A LW LL AC +
Sbjct: 437 MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSG 496
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
+ +L + + + ++ELEP G YV+LSN+YA +WD LR+ MK K +EK G S
Sbjct: 497 GHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSW 556
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+ + + + + +Y+M+ E+ ++ +
Sbjct: 557 IELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNL 592
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/611 (32%), Positives = 324/611 (53%), Gaps = 67/611 (10%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLV-SGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
PIL + +C T+K IH +LL+ S ++ F +++L+ L + + + FD I
Sbjct: 4 PILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLR-LYSRFGATDYAHKVFDEIT 62
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+P+A++ +++ ++ A S + + M + + ++T + K A + + G+
Sbjct: 63 QPNAYLWTSLIHGYVENRQYDEAFSLFIQ-MRREPISVLNFTISSVLKALARLTRFKGGQ 121
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
V+ ++K GF DL V+NS++ ++ C +V AR+ F++ D+V+WN MI GY N
Sbjct: 122 AVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNND 181
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
V AR+ FD MPER++ +W SMI GYV GDM A LFD MP +D+ SWN M+ GY
Sbjct: 182 RVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMD 241
Query: 298 IGN-------------------------------VTSARNCFDRMCMRNVVSWNILLALY 326
IG+ + SA++ FDRM +NV+SW I+L Y
Sbjct: 242 IGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGY 301
Query: 327 VRCKDY-------------------------------CECLRLFDRMIRGDAKPNEASLM 355
++ D + L LF+R D KP+E ++
Sbjct: 302 IKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFIL 361
Query: 356 SVLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+++AC+ +G+ID + IH+Y+ + D+ + TSL+ MYAKCG ++ A +F+
Sbjct: 362 GIISACSQLGIIDAAESIIHNYVGPSLLS-DLRVFTSLIDMYAKCGSIEKALQMFEMAHP 420
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
K+++ +++MI HG G A+ +F +M++ P+ TF+ VL+AC H G+V EG Y
Sbjct: 421 KDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKY 480
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M + I+P +HY C+VDLLGR G + ++ L+ +P+ +WGALL+AC H
Sbjct: 481 FKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHC 540
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N +L ++ A L ++EP + G Y+LLSNIYA+ G+W V +R ++E + K GSS +
Sbjct: 541 NVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWI 600
Query: 595 HPGEFASESIV 605
E ++
Sbjct: 601 ELSHVVHEFVM 611
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 202/564 (35%), Positives = 318/564 (56%), Gaps = 24/564 (4%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL--FFDG 115
+ IL LE C T+ E ++H ++ + + QD SR L C S +L+ F+
Sbjct: 6 NSILSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSR-LVDFCAYSDSGNLNYAKSVFNQ 64
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I P ++ N+++K + + P AL+ Y E M K +H+TFP + K C+ +
Sbjct: 65 IDRPSLYIWNSMIKGYSISESPDEALTMYRE-MRQKGYAPDHFTFPFVLKACSLVNGYNL 123
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+ VH IVK GFE+D++ +L+ MY+ CG++ A KVF+D P W++V W S+I G +
Sbjct: 124 GQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCIS 183
Query: 236 NR------EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA------NGLFDLMPFR 283
N V EL+ P T +++ D+ A G L PF+
Sbjct: 184 NDCPSEAVRVYKDMELWSVAPNE--ITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQ 241
Query: 284 -----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
+V+ ++D YAK G++ +AR+ F++M RN+V+WN ++ Y + E L L
Sbjct: 242 SNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDL 301
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F M P++A+ + V+ ACA++G + GQ +H+Y+ K + D + T+L+ MYAK
Sbjct: 302 FSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAK 361
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDATFIC 457
G + A+ VF + +K+V +W S+I+G MHG GE+AL F +M E P++ T+I
Sbjct: 362 SGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIG 421
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
VLSAC+H G V +G +F M+ ++ IEP +HYGCMVDLL RAG + ++E LV K+P+E
Sbjct: 422 VLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVE 481
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A+W ALL+ C + N ++ V + + ELE G YVLLSNIYA +W+EV+ R
Sbjct: 482 PNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMAR 541
Query: 578 RIMKEKELEKAVGSSLVHPGEFAS 601
+MKE++++K++G S V AS
Sbjct: 542 ELMKERKIQKSLGHSSVEMKMLAS 565
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 337/605 (55%), Gaps = 44/605 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAF 122
L C T +F Q+H+Q + G++ + ++ C+ L VS + F I EPD
Sbjct: 41 LGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVV 100
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP-LLGKVCAGIRSLREGKKVHA 181
+ N ++K + + D G Y M+ + V + +TFP LL + +L GKK+H
Sbjct: 101 VWNNMIKGWSKV-DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+VK G +L+V+N+L+ MYS+CG + AR VF+ D+ +WN MI GY + +E
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 219
Query: 242 ARELFDFMPERDIFT----------------------------------------WNSMI 261
+ EL M ER++ + N+++
Sbjct: 220 SIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV 278
Query: 262 SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ Y G+M+ A +F M RDV+SW ++ GY + GN+ AR FD+M +R+ +SW I
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ Y+R + E L +F M P+E +++SVLTACA++G ++IG+WI +YI K +
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK 398
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
IK DV++ +L+ MY KCG + A+ VF +M +++ +W +M++G +GQG++A+++F
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFF 458
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M+ P+D T++ VLSAC H+GMV + +F M+ ++IEP + HYGCMVD+LGRA
Sbjct: 459 QMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
GL++++ E++ K+PM +WGALL A H++ + ++ A+ ++ELEP + Y LL
Sbjct: 519 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLG 621
NIYA +W ++ +RR + + ++K G SL+ FA E + + + +Y L
Sbjct: 579 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLE 638
Query: 622 EIGAQ 626
E+ +
Sbjct: 639 ELAQE 643
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 227/509 (44%), Gaps = 51/509 (10%)
Query: 134 LNDPFGA-LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
L PF + LS + +M+ E + + ++ + K++H++ + G +
Sbjct: 7 LKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNP 66
Query: 193 FVRNSLIHMY--SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+ L + + G V A K+F P D+V WN+MI G+ K G L+ M
Sbjct: 67 TFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNML 126
Query: 251 ER----DIFTWNSMISGYV-DVGDMEAANGLF-DLMPF---RDVVSWNCMIDGYAKIGNV 301
+ D T+ +++G D G + L ++ F ++ N ++ Y+ G +
Sbjct: 127 KEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLM 186
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDR C +V SWN++++ Y R K+Y E + L M R P +L+ VL+AC
Sbjct: 187 DMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSAC 246
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+ + D+ + +H Y+ +C+ +P + L +L+ YA CG MD+A +F +M ++V+SW
Sbjct: 247 SKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWT 306
Query: 422 SMIMGYGMHGQGE-------------------------------KALEMFMEMEKRGPTP 450
S++ GY G + ++LE+F EM+ G P
Sbjct: 307 SIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
++ T + VL+AC H G + G W + + KI+ V ++D+ + G ++++
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 511 VSKLPMEAGPALWGALLSACSTHSN-SELGKIVAQ-HLMELEPRDPGPYVLLSNIYASEG 568
+ + W A++ + + E K+ Q M ++P D +LS S
Sbjct: 426 FHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS-- 482
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPG 597
V+ R+ + + + SLVH G
Sbjct: 483 --GMVDQARKFFAKMRSDHRIEPSLVHYG 509
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 283/497 (56%), Gaps = 36/497 (7%)
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF---VEHNHYTF 160
+++ + L FD I PD FM NT+++ P A+S Y + V + TF
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
P + + C + + G +VHA +VK G E D FV+N+LI M++ CG +
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNL------------ 133
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
G A LFD D W++MI+G GD+ AA LFD
Sbjct: 134 -------------------GIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDEC 174
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P +D+VSWN MI YAK G++ AR FD++ R+VVSWN++++ YVRC + L LF+
Sbjct: 175 PVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFE 234
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAK 398
+M R KP+ +++S+L+ACA+ G +D+GQ +HS + R V+L +L+ MYAK
Sbjct: 235 QMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAK 294
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG M A VF +M +K+V +WNS++ G +HG ++++MF +M K P++ TF+ V
Sbjct: 295 CGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAV 354
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
L AC+H GMV +G +F+LMQ Y++EP ++HYGCMVD+LGRAGL++++ E + + E
Sbjct: 355 LIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEP 414
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
+W LLSAC H EL K + L++ + G YVLLSNIYAS G+W E +R+
Sbjct: 415 NSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRK 474
Query: 579 IMKEKELEKAVGSSLVH 595
+M + + K S +H
Sbjct: 475 LMDDSGVNKEADSERLH 491
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 337/605 (55%), Gaps = 44/605 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAF 122
L C T +F Q+H+Q + G++ + ++ C+ L VS + F I EPD
Sbjct: 41 LGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVV 100
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP-LLGKVCAGIRSLREGKKVHA 181
+ N ++K + + D G Y M+ + V + +TFP LL + +L GKK+H
Sbjct: 101 VWNNMIKGWSKV-DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+VK G +L+V+N+L+ MYS+CG + AR VF+ D+ +WN MI GY + +E
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 219
Query: 242 ARELFDFMPERDIFT----------------------------------------WNSMI 261
+ EL M ER++ + N+++
Sbjct: 220 SIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV 278
Query: 262 SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ Y G+M+ A +F M RDV+SW ++ GY + GN+ AR FD+M +R+ +SW I
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ Y+R + E L +F M P+E +++SVLTACA++G ++IG+WI +YI K +
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK 398
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
IK DV++ +L+ MY KCG + A+ VF +M +++ +W +M++G +GQG++A+++F
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFF 458
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M+ P+D T++ VLSAC H+GMV + +F M+ ++IEP + HYGCMVD+LGRA
Sbjct: 459 QMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
GL++++ E++ K+PM +WGALL A H++ + ++ A+ ++ELEP + Y LL
Sbjct: 519 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLG 621
NIYA +W ++ +RR + + ++K G SL+ FA E + + + +Y L
Sbjct: 579 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLE 638
Query: 622 EIGAQ 626
E+ +
Sbjct: 639 ELAQE 643
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 227/509 (44%), Gaps = 51/509 (10%)
Query: 134 LNDPFGA-LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
L PF + LS + +M+ E + + ++ + K++H++ + G +
Sbjct: 7 LKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNP 66
Query: 193 FVRNSLIHMY--SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+ L + + G V A K+F P D+V WN+MI G+ K G L+ M
Sbjct: 67 TFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNML 126
Query: 251 ER----DIFTWNSMISGYV-DVGDMEAANGLF-DLMPF---RDVVSWNCMIDGYAKIGNV 301
+ D T+ +++G D G + L ++ F ++ N ++ Y+ G +
Sbjct: 127 KEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLM 186
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDR C +V SWN++++ Y R K+Y E + L M R P +L+ VL+AC
Sbjct: 187 DMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSAC 246
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+ + D+ + +H Y+ +C+ +P + L +L+ YA CG MD+A +F +M ++V+SW
Sbjct: 247 SKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWT 306
Query: 422 SMIMGYGMHGQGE-------------------------------KALEMFMEMEKRGPTP 450
S++ GY G + ++LE+F EM+ G P
Sbjct: 307 SIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
++ T + VL+AC H G + G W + + KI+ V ++D+ + G ++++
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 511 VSKLPMEAGPALWGALLSACSTHSN-SELGKIVAQ-HLMELEPRDPGPYVLLSNIYASEG 568
+ + W A++ + + E K+ Q M ++P D +LS S
Sbjct: 426 FHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS-- 482
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPG 597
V+ R+ + + + SLVH G
Sbjct: 483 --GMVDQARKFFAKMRSDHRIEPSLVHYG 509
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 293/521 (56%), Gaps = 37/521 (7%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y M A+ V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y
Sbjct: 98 YVAMRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYR 157
Query: 205 C------------------------------------GEVLDARKVFEDGPVWDLVTWNS 228
C G+ A +FE P ++V+WN+
Sbjct: 158 CGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNT 217
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
++ G+ + ++ AR +FD MP R+ +WN MISGY GD+EAA +FD M +DVVSW
Sbjct: 218 VVAGFARTGDMVTARTVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSW 277
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD-RMIRGDA 347
M+ YAKIG++ +A+ FD M ++N+VSWN ++ Y Y E LR F M+ G
Sbjct: 278 TAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRF 337
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P+EA+L+SV++ACA +G ++ WI S+I K V L +L+ M+AKCG + A++
Sbjct: 338 RPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQS 397
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F M + +++W +MI G+ +G +AL ++ M + G + FI L+ACTH G+
Sbjct: 398 IFYKMETRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDGTVFIAALAACTHGGL 457
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ EGW F+ M Y I+P++EHYGC+VDLLGRAG ++++ + +P+E +W LL
Sbjct: 458 LQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLL 517
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
S+C H N+EL + V++ + ELEP + VL+SN A EG+WD V R M+ +EK
Sbjct: 518 SSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIGARTSMRNWGIEK 577
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
GSSL+ G E + ++ R+ +Y + + A M+
Sbjct: 578 VPGSSLIQVGSEVHEFLAKDTRHERRKEIYETVDGLMALMR 618
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 308/539 (57%), Gaps = 44/539 (8%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS---------LSVLFFDGI 116
+ + V QIH ++V+GL+ + +++ L T++S V ++ F I
Sbjct: 10 TITNVGTLKQIHALMIVNGLTSNVGFLRKLV--LTTAMSMVGPNATSAVIRYALQMFAQI 67
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+PD FM NT ++ +DP A++ Y + M + V+ +++TFP + K C + + G
Sbjct: 68 PQPDTFMWNTYIRGSSQSHDPVHAVALYAQ-MDQRSVKPDNFTFPFVLKACTKLFWVNTG 126
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
VH R+++ GF ++ VRN+L+ ++ CG++ KV
Sbjct: 127 SAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDL----KV---------------------- 160
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
A ++FD + D+ W+++I+GY GD+ A LFD MP RD+VSWN MI Y
Sbjct: 161 -----ATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYT 215
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G + SAR FD M+++VSWN L+ YV E L LFD M P+E +++S
Sbjct: 216 KHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLS 275
Query: 357 VLTACANMGVIDIGQWIHS-YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+L+ACA++G ++ G+ +H+ I+ + K LL +L+ MYAKCG + A VF + +K
Sbjct: 276 LLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDK 335
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VVSWNS+I G HG E++L +F EM+ P++ TF+ VL+AC+HAG V EG YF
Sbjct: 336 DVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYF 395
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
LM+ YKIEP + H GC+VD+LGRAGL++++ ++ + +E +W +LL AC H +
Sbjct: 396 HLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGD 455
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EL K + L+ + G YVLLSN+YAS+G+WD EN+R++M + + K GSS V
Sbjct: 456 VELAKRANEQLLRMRGDQSGDYVLLSNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFV 514
>gi|449443185|ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 308/560 (55%), Gaps = 30/560 (5%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGI 116
+ ++ LE C T+KE QIH+ ++ + + ++ SR++ S L + + FD I
Sbjct: 6 YTVMSFLEKCKTMKELKQIHSLMITTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQI 65
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+ ++ N+++K + D FGAL F YE+M K +H+TFP + KVC+ I L G
Sbjct: 66 NQRTVYIWNSMIKGYCNGGDKFGAL-FMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLVYG 124
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+ VH RIVK GFELD++ + L++MY CG++ KVFE P W++V W S+I G+V N
Sbjct: 125 QSVHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNN 184
Query: 237 REVGFARELFDFMPE--------------------RDIFTWNSMISGYVDVG-DMEAANG 275
+ A LF M RDI T + +G D N
Sbjct: 185 DQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPFDTNS 244
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
F+ V+ ++D YAK G + +ARN FD+M RN+V WN +++ Y + E
Sbjct: 245 CFN------VILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEA 298
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
LRLF M PN+A+ +SV++AC +MG G+ +H+ + V + T+L+ M
Sbjct: 299 LRLFVDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRASFHEFVAIGTALMDM 358
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP-TPNDAT 454
YAK G D A +F + +K+V++W +MI G + G+G++AL +F ME+ P+ T
Sbjct: 359 YAKAGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQIT 418
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+I VL AC+H G+V EG F M +Y IEP +EHYGCM+DLL RAG +++EEL+ K+
Sbjct: 419 YIAVLWACSHLGLVEEGQKQFTSMTEVYGIEPTMEHYGCMIDLLSRAGHSKEAEELLMKM 478
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
P + + ++L+ C + N L V H++ELE G YVLLSNI+A W E++
Sbjct: 479 PTQPNATILSSILNGCEMYGNVGLANRVKSHIVELENSSSGVYVLLSNIHAKACNWQEMK 538
Query: 575 NLRRIMKEKELEKAVGSSLV 594
R ++K K + K +G+S V
Sbjct: 539 LARDMLKHKNIGKTLGNSFV 558
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 312/542 (57%), Gaps = 17/542 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+++ + + QIH +L++SGL + F ++++ ++L + + FD PD FM
Sbjct: 63 IDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNG-SSNLGQICYARKLFDEFCYPDVFM 121
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N I++S+ N+ + Y M V + +TFP + K C + +H +I
Sbjct: 122 WNAIIRSY-SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQI 180
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K GF D+FV+N L+ +Y+ CG + A+ VF+ +V+W S+I GY +N + A
Sbjct: 181 IKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEAL 240
Query: 244 ELFDFMPER----DIFTWNSMISGYVDVGDME---AANGLFDLMPFRD----VVSWNCMI 292
+F M D S++ Y DV D+E + +G M D ++S
Sbjct: 241 RMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAF- 299
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YAK G VT A++ FD+M NV+ WN +++ Y + E + LF MI + KP+
Sbjct: 300 --YAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSV 357
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++ S + A A +G +++ QW+ Y+ K D+ ++TSL+ MYAKCG ++ AR VFD
Sbjct: 358 TVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRN 417
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++K+VV W++MIMGYG+HGQG +A+ ++ M++ G PND TFI +L+AC H+G+V EGW
Sbjct: 418 SDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGW 477
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M+ ++I P+ EHY C+VDLLGRAG + ++ + K+P+E G ++WGALLSAC
Sbjct: 478 ELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKI 536
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+ LG+ A L L+P + G YV LSN+YAS WD V ++R +M+EK L K +G S
Sbjct: 537 YRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYS 596
Query: 593 LV 594
++
Sbjct: 597 VI 598
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/497 (37%), Positives = 283/497 (56%), Gaps = 36/497 (7%)
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF---VEHNHYTF 160
+++ + L FD I PD FM NT+++ P A+S Y + V + TF
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
P + + C + + G +VHA +VK G E D FV+N+LI M++ CG +
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNL------------ 133
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
G A LFD D W++MI+G GD+ AA LFD
Sbjct: 134 -------------------GIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDEC 174
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P +D+VSWN MI YAK G++ AR FD++ R+VVSWN++++ YVRC + L LF+
Sbjct: 175 PVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFE 234
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAK 398
+M R KP+ +++S+L+ACA+ G +D+GQ +HS + R V+L +L+ MYAK
Sbjct: 235 QMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAK 294
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG M A VF +M +K+V +WNS++ G +HG ++++MF +M K P++ TF+ V
Sbjct: 295 CGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAV 354
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
L AC+H GMV +G +F+LMQ Y++EP ++HYGC+VD+LGRAGL++++ E + + E
Sbjct: 355 LIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEP 414
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
+W LLSAC H EL K + L++ + G YVLLSNIYAS G+W E +R+
Sbjct: 415 NSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRK 474
Query: 579 IMKEKELEKAVGSSLVH 595
+M + + K S +H
Sbjct: 475 LMDDSGVNKEADSERLH 491
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/407 (42%), Positives = 259/407 (63%)
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
D+V+WNSMI G +K E+ A +LFD MP +D +WN+++ GYV G+M A GLF+ MP
Sbjct: 11 DVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESMP 70
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
R+VVSW+ M+ GY K G++ AR FDRM ++N+VSW I+++ Y + +R F++
Sbjct: 71 ERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQ 130
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M KP++ +++S+L +CA G++ +G+ +H+ I++ R K V +S +L+ MYAKCG
Sbjct: 131 MEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQ 190
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+D A +VF+ M++K++VSWN M+ G MHG GEKAL++F M + G P+ T + VL A
Sbjct: 191 VDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCA 250
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C HAG V EG YF+ M+R Y I P +EHYGCMVDLLGR G ++++ LV +P+E
Sbjct: 251 CVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVV 310
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+WG LL AC H+ L + V L +LEP DPG Y LLSNI+AS G W V N+R MK
Sbjct: 311 IWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMK 370
Query: 582 EKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
++K G+S + + E V + + +Y M+ +G +K
Sbjct: 371 NFGIQKPSGASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDLK 417
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
++++ Y G++ AR +F+ PV +LV+W ++ GY A F+ M E +
Sbjct: 78 STMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLK 137
Query: 256 TWNSMI---------SGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSAR 305
+ + SG + +G + + + + ++ V N ++D YAK G V A
Sbjct: 138 PDDGTVISILASCAESGLLGLG--KRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRAL 195
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
+ F+ M +++VSWN +L + L+LF M + +P++ +L++VL AC + G
Sbjct: 196 SVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAG 255
Query: 366 VIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSM 423
+D G ++ ++ + I P + ++ + + G + A + +M E NVV W ++
Sbjct: 256 FVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTL 315
Query: 424 IMGYGMH---GQGEKALEMFMEMEKRGP 448
+ MH G E+ L+ ++E P
Sbjct: 316 LGACRMHNAVGLAEEVLDCLFKLEPSDP 343
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+E+M ++ + T + CA L GK+VH I + ++ + V N+L+ MY+
Sbjct: 128 FEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAK 187
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSM 260
CG+V A VF DLV+WN M+ G + A +LF M + D T ++
Sbjct: 188 CGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAV 247
Query: 261 I-----SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR- 314
+ +G+VD G N D + + CM+D + G + A M +
Sbjct: 248 LCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEP 307
Query: 315 NVVSWNILLA 324
NVV W LL
Sbjct: 308 NVVIWGTLLG 317
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 310/575 (53%), Gaps = 41/575 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL + + + ++H L+ + L+ D S L + + V + F + E
Sbjct: 383 ILMASAGLADIGKGRELHGHLVRNLLNSDIILGS-ALVDMYSKCGMVEEAHQVFRSLLER 441
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N ++ ++ AL Y++ ++ + +TF L +CA R+ +G+++
Sbjct: 442 NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 501
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA +++ ++ V L+HMYS CG + A+++F + +WNSMI+GY +N E
Sbjct: 502 HAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGET 561
Query: 240 GFARELFDFMP----ERDIFTWNSMISG-------------------------------- 263
A LF M + D F+ +SM+S
Sbjct: 562 QEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVL 621
Query: 264 ---YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
Y G M+ A ++D +DV+ N M+ + G A+N FD+M RN WN
Sbjct: 622 VDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWN 681
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI-QK 379
+LA Y E F M+ D + + ++++++ C+++ ++ G +HS I +K
Sbjct: 682 SILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKK 741
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
+ V+L T+L+ MY+KCG + AR VFDNM KN+VSWN+MI GY HG ++AL +
Sbjct: 742 GFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALIL 801
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
+ EM K+G PN+ TF+ +LSAC+H G+V EG F MQ Y IE K EHY CMVDLLG
Sbjct: 802 YEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLG 861
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
RAG + D++E V K+P+E + WGALL AC H + ++G++ AQ L EL+P++PGPYV+
Sbjct: 862 RAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVI 921
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+SNIYA+ G+W EVE++R++MK K ++K G S +
Sbjct: 922 MSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 956
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 218/443 (49%), Gaps = 20/443 (4%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSH-PILQKLESCSTVKEFHQ---IHTQLLVSGLSQDSFAA 92
+ PKP T P D++ P ++ C F + IHTQ++ +G + D++
Sbjct: 54 DSPKPTSIHTK----PASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLM 109
Query: 93 SRVLKKLCTS--LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMA 150
+++L S L + + F+ + E + NT++ ++ ++D L Y +M
Sbjct: 110 TKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLY-GRMRG 168
Query: 151 KFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD 210
+ +TFP + K C + + +++ + +VK G +LFV +L+ Y+ G + D
Sbjct: 169 SGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDD 228
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PERDIFTWNSMISGY 264
A ++ +VTWN++I GYVK A +FD M P+ F + G
Sbjct: 229 AVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGA 288
Query: 265 VDV--GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
+ G + + L D N +ID YAK + S FD M RN V+WN +
Sbjct: 289 LRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSI 348
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
++ + + + L LF RM K N +L S+L A A + I G+ +H ++ + +
Sbjct: 349 ISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLL 408
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
D++L ++L+ MY+KCG+++ A VF ++ E+N VS+N+++ GY G+ E+ALE++ +
Sbjct: 409 NSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHD 468
Query: 443 MEKR-GPTPNDATFICVLSACTH 464
M+ G P+ TF +L+ C +
Sbjct: 469 MQSEDGIQPDQFTFTTLLTLCAN 491
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 330/594 (55%), Gaps = 43/594 (7%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H Q+++ GL+ ++ +++ C + + FD I +P+ FM N++++ +
Sbjct: 7 LHAQIILHGLTNETLTLGKLIS-FCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSN 65
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+DP A+ + +M+ + N +T P + K C + E VH +K G +F
Sbjct: 66 SDDPIDAV-LLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVF 124
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV-------------KNREVG 240
V+N+LI +Y VCG + ARK+F+D LV+WNSMI GY K RE G
Sbjct: 125 VQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWG 184
Query: 241 FARELFDFMP--------------------------ERDIFTWNSMISGYVDVGDMEAAN 274
+ F F+ + DI N+++ Y G++ +A
Sbjct: 185 MEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQ 244
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+FD ++VVSW MI YA+ G++ AR FD+M +NVVSWN +++ Y+R Y E
Sbjct: 245 AIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYRE 304
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L LF++M P+EA+L+S+L AC+ +G + +G+ IH+YI + V L SL+
Sbjct: 305 ALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLID 364
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAKCG + A ++F M KN+VSWN +I +HG G +A+++F EM+ G P++ T
Sbjct: 365 MYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEIT 424
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+LSAC+H+G+V G +YFD M IY++ ++EHY CMVDLLGR GL+ ++ EL+ ++
Sbjct: 425 LTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRM 484
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
PM+ +WGALL AC H N E+GK + + L+ELEP G YVL+SNIY +W++V+
Sbjct: 485 PMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVK 544
Query: 575 NLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+R++M ++ ++K S + E +V++ +Y+ML ++ ++
Sbjct: 545 KIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLR 598
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/575 (34%), Positives = 325/575 (56%), Gaps = 46/575 (8%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK-KLCTSLSSVSLSVLFFDGIQEPDAF 122
L+SC ++ + QI + GL QD ++++ + +SL + + F+ I P F
Sbjct: 15 LKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHPSLF 74
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ N ++K+F+ A+S + +++ + V ++YT+P + K I +REG+K+HA
Sbjct: 75 IYNLMIKAFVKRGSLRSAISLF-QQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAF 133
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN------ 236
+VK G E D +V NSL+ MY+ G V +VFE+ P D V+WN MI GYV+
Sbjct: 134 VVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFEEA 193
Query: 237 ------------------------------REVGFARELFDFMP-ERDI--FTWNSMISG 263
R + +E+ D++ E D+ N+++
Sbjct: 194 VDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANELDLTPIMGNALLDM 253
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
Y G + A +FD M ++V W M+ GY G + AR F+R R+VV W ++
Sbjct: 254 YCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMI 313
Query: 324 ALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
YV+ + + + LF M IRG +P++ ++++LT CA +G ++ G+WIH+YI + RI
Sbjct: 314 NGYVQFNHFEDAIALFGEMQIRG-VEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRI 372
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
K D ++ST+L+ MYAKCG ++ + +F+ + + + SW S+I G M+G+ +ALE+F
Sbjct: 373 KMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEA 432
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M+ G P+D TF+ VLSAC HAG+V EG F M IY IEP +EHYGC +DLLGRAG
Sbjct: 433 MQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAG 492
Query: 503 LMRDSEELVSKLPMEAGP---ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
L++++EELV KLP + L+GALLSAC T+ N ++G+ +A L +++ D + L
Sbjct: 493 LLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTL 552
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L++IYAS +W++V +R MK+ ++K G S +
Sbjct: 553 LASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAI 587
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 312/544 (57%), Gaps = 15/544 (2%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGI 116
PIL +LE+C ++ E +Q+H ++ S + ++ SR++ C ++S + F+ I
Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P ++ N++++ + +P AL FY E M+ K +++TFP + K C+G+R ++ G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQE-MLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
VH +VK GFE++++V L+HMY CGEV +VFED P W++V W S+I G+V N
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC-----M 291
A E F M + +++ VD+ + A FD F+ V +N +
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIM---VDL--LVACGRCFDPY-FQSKVGFNVILATSL 240
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
ID YAK G++ +AR FD M R +VSWN ++ Y + D E L +F M+ P++
Sbjct: 241 IDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK 300
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ +SV+ A G +GQ IH+Y+ K D + +L+ MYAK G + A+ F++
Sbjct: 301 VTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED 360
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG-PTPNDATFICVLSACTHAGMVLE 470
+ +K+ ++W +I+G HG G +AL +F M+++G TP+ T++ VL AC+H G+V E
Sbjct: 361 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 420
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G YF M+ ++ +EP VEHYGCMVD+L RAG ++E LV +P++ +WGALL+ C
Sbjct: 421 GQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 480
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N EL + + E E G YVLLSNIYA G+W +V+ +R MK K ++K +G
Sbjct: 481 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 540
Query: 591 SSLV 594
S V
Sbjct: 541 HSSV 544
>gi|357445603|ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360447|gb|ABN08457.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355482127|gb|AES63330.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 318/548 (58%), Gaps = 16/548 (2%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDS---FAASRVLKKLCTSL--SSVSLSVLFF 113
P+ Q L + + QIH L + L Q++ F + + L S S++ + F
Sbjct: 12 PLNQFLNNAKNISHLKQIHA-LFLKHLPQNAPHHFFNRLLFRVLHFSAEKSNLYYAHKLF 70
Query: 114 DGIQE-PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
D + + F+ +++++FL + F + +M K + + +TF L+ C + +
Sbjct: 71 DTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPA 130
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
EGK+VHAR+V+ GF + V+ +L+ MY+ CG V DAR VF+ D+V W +MI G
Sbjct: 131 GFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICG 190
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
Y K + AR LFD M ER+ FTW +M++GY + GDM+AA L+D+M +D V+W MI
Sbjct: 191 YAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMI 250
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWN-----ILLALYVRCKDYCECLRLFDRMIRGDA 347
GY K+GNV+ AR FD + V WN LLA Y + E + ++++M R
Sbjct: 251 AGYGKLGNVSEARRIFDEI----TVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKI 306
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
K + +++ ++ACA + I + + I++ + ++S +L+ M +KCG +DLA
Sbjct: 307 KVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWR 366
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
F+ M +++ ++++MI + HG+ + A+++F++M++ G PN TF+ VL+AC+ +G+
Sbjct: 367 EFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGL 426
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ EG +F +M +Y IEP EHY CMVDLLGRAG + + L+ + A WG+LL
Sbjct: 427 IEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLL 486
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+AC + N ELG+I A+HL E++P D G YVLL+N YAS KW+ E ++++M +K ++K
Sbjct: 487 AACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWECAEEVKKLMSKKGMKK 546
Query: 588 AVGSSLVH 595
G S +
Sbjct: 547 PSGYSWIQ 554
>gi|449446173|ref|XP_004140846.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 488
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 282/461 (61%), Gaps = 12/461 (2%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMY-- 202
Y ++ + ++ + +T+P + K CA + +GKKVH RI+K GF L+ V ++L H+Y
Sbjct: 18 YGDLLQRGLKPHSFTYPFVLKSCADLGWFWDGKKVHCRILKTGFSLNSSVSDALFHLYVN 77
Query: 203 ---------SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
+ G DARKVF++ V + WN MI Y +V A++LF+ M +RD
Sbjct: 78 FSKFTGPKDAADGMASDARKVFDEMCVRSVEVWNRMILRYTSTGDVSGAQKLFNTMEDRD 137
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+WN+MISGY+ VG++ A LF+ MP ++VVSW MI YAK G++ +AR F++M
Sbjct: 138 TVSWNTMISGYIKVGEVMKARELFEKMPEKNVVSWTSMISAYAKAGDLATARMFFNKMPQ 197
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RNVVSWN +++ YV+ D+ E L LF++M+ P+ + +SV +AC+++G + +G I
Sbjct: 198 RNVVSWNSMISSYVQHGDFQEALDLFNQMLSEGITPDGYTFVSVFSACSHLGNLMLGTKI 257
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H I + V+ +T+L+ MYAKCG ++ A N+F + +K+V WN M+ +HGQ
Sbjct: 258 HYAIDDFS-QLGVIAATALIEMYAKCGDINRAFNLFIKIGKKDVFFWNVMLKSLALHGQA 316
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
+ AL++F M+K+G PND TF+ L AC+H GMV EG FD+M++ YKI P++EH+GC
Sbjct: 317 QDALKLFSLMQKQGLKPNDFTFLGALFACSHGGMVEEGQTIFDMMEKEYKIRPRIEHFGC 376
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
+VDLL R G + ++ ++V K+P EA A+WGALL C + + + + +L ++
Sbjct: 377 IVDLLSRNGRLEEALDVVDKMPFEADVAIWGALLGGCKLRGDFKRAGEIVERARKLRSKE 436
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G +V SN+YAS +W E N R M+ + + K G S V
Sbjct: 437 GGIHVSFSNMYASVEQWAEAVNAREKMENENILKKTGQSSV 477
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 22/239 (9%)
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ + L+ +++ KP+ + VL +CA++G G+ +H I K + +S +L
Sbjct: 13 QSVSLYGDLLQRGLKPHSFTYPFVLKSCADLGWFWDGKKVHCRILKTGFSLNSSVSDALF 72
Query: 394 TMY-----------AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
+Y A G+ AR VFD M ++V WN MI+ Y G A ++F
Sbjct: 73 HLYVNFSKFTGPKDAADGMASDARKVFDEMCVRSVEVWNRMILRYTSTGDVSGAQKLFNT 132
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
ME R + ++ ++S G V++ F+ M E V + M+ +AG
Sbjct: 133 MEDR----DTVSWNTMISGYIKVGEVMKARELFEKMP-----EKNVVSWTSMISAYAKAG 183
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
+ + +K+P + W +++S+ H + + + ++ E P Y +S
Sbjct: 184 DLATARMFFNKMP-QRNVVSWNSMISSYVQHGDFQEALDLFNQMLS-EGITPDGYTFVS 240
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 195/510 (38%), Positives = 296/510 (58%), Gaps = 19/510 (3%)
Query: 102 SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
SLSS +L+ F+ + + + N+++ D AL + + +FP
Sbjct: 1089 SLSS-NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIP-TRSSFP 1146
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
K C+ + L G+ H + GFE DLFV ++LI MYS CG++ DAR +F++ P+
Sbjct: 1147 CTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 1206
Query: 222 DLVTWNSMIDGYVKNREVGFARELF-DFMPER-----------DIFTWNSMISGYVDV-- 267
++V+W SMI GYV+N + A LF DF+ E D S++S V
Sbjct: 1207 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 1266
Query: 268 -GDMEAANGLFDLMPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G E +G F + N ++D YAK G ++ FD M ++ +SWN ++A+
Sbjct: 1267 KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 1326
Query: 326 YVRCKDYCECLRLFDRMIRG-DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y + E L +F M+R + N +L +VL ACA+ G + G+ IH + K ++
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
+V + TS++ MY KCG +++A+ FD M EKNV SW +M+ GYGMHG+ ++AL++F +M
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
+ G PN TF+ VL+AC+HAG+V EGW +F+ M+ Y IEP +EHYGCMVDL GRAG +
Sbjct: 1447 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 1506
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ L+ ++ M+ +WG+LL AC H N +LG+I AQ L EL+P + G YVLLSN+Y
Sbjct: 1507 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 1566
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A G+W +VE +R +MK ++L K G SLV
Sbjct: 1567 ADAGRWADVERMRMLMKNRQLVKPPGFSLV 1596
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 188/375 (50%), Gaps = 44/375 (11%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED--GP---VW 221
C + LR+ +HA+I++ G D + LIH+YS G + A +F P W
Sbjct: 37 CKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTW 93
Query: 222 DLVTWNSMIDGYVKNREV--------GFARELFDFMP----------------------- 250
+L+ + I+G + + G A + F F P
Sbjct: 94 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTF-PFVIKACTNFLSIDLGKVVHGSLI 152
Query: 251 ----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
D+F N++I Y G A +F+ M R+VVSW +I G G++ AR
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
FD + +NVVSW ++ Y+R + E L LF RM + PNE +++S++ AC MG+
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ +G+ IH Y K I+ V L T+L+ MY+KCG + A VF+ M K++ +WNSMI
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
G+HG G++AL +F EME+ P+ TFI VL AC H V EG YF M + Y I P
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392
Query: 487 KVEHYGCMVDLLGRA 501
EHY CM +L R+
Sbjct: 393 IPEHYECMTELYARS 407
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 175/382 (45%), Gaps = 42/382 (10%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C K QIH +++ SGLS D +R L L ++ ++ ++L F IQ P F
Sbjct: 34 LQNCKNFKHLRQIHAKIIRSGLSNDQLL-TRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N I+++ + AL Y+ M+ + + + +TFP + K C S+ GK VH +
Sbjct: 93 WNLIIRANTINGLSEQAL-MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K GF D+FV+N+LI Y CG A KVFE V ++V+W ++I G + ++ AR
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP---------------------- 281
+FD +P +++ +W +MI+GY+ E A LF M
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 282 -------FRDVVSWNC----------MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
D NC +ID Y+K G++ A F+ M +++ +WN ++
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIK 383
E L LF M R + KP+ + + VL AC ++ + G + Q I
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 384 PDVLLSTSLLTMYAKCGVMDLA 405
P + +YA+ +D A
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 312/544 (57%), Gaps = 12/544 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ-E 118
+L ++ C+ ++ F QIH QLL S L + ++ ++ + F
Sbjct: 87 LLDFIQRCNDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCNFLKQFDWS 146
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
+F CN I+ + N P+ A+ Y + FV + YT P + K CA + E K+
Sbjct: 147 FSSFPCNLIISGYGAGNFPWAAIRIYRWVVGNGFVP-DVYTVPAVLKSCARFSGIAEVKQ 205
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H VK D+FV+NS +H+YS+CG+ + A KVF+ PV D+V+W +I GY+K
Sbjct: 206 IHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGL 265
Query: 239 VGFARELF---DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCM 291
A LF D P F S++ +G + G+ L+ +++V N +
Sbjct: 266 FNDAVALFLRMDVAPNAATFV--SILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTL 323
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+D Y K +VT A+ FD + +++VSW +++ V+ + E L LF M+ +P+
Sbjct: 324 MDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDG 383
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
L SVL+ACA++G++D G+W+H YI RIK DV + TSL+ MYAKCG +++A+ +F+
Sbjct: 384 VILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNL 443
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ KN+ +WN+ I G ++G G++AL+ F + + G PN+ TF+ V SAC H+G+V EG
Sbjct: 444 LPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEG 503
Query: 472 WWYFDLMQR-IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
YF M Y + P +EHYGCMVDLL RA L+ ++ EL++K+PM + GALLSA
Sbjct: 504 RSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSAS 563
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
ST+ N EL + + + E ++ G YVLLSN YA+ KW EV ++RR+MKEK + KA G
Sbjct: 564 STYGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPG 623
Query: 591 SSLV 594
SSL+
Sbjct: 624 SSLI 627
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 252/396 (63%), Gaps = 5/396 (1%)
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
R++F + ++V W SMI+GY+ + ++ AR LFD PERD+ WN M+SGY++ GDM
Sbjct: 33 REIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMV 92
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
A LF MP RDV+ WN ++ GYA GNV + F+ M RN+ SWN L+ Y
Sbjct: 93 EARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGL 152
Query: 332 YCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
+ E L F RM+ D PN+A+L++VL+ACA +G +D+G+W+H Y + +K +V +
Sbjct: 153 FFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGN 212
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
+L+ MYAKCG+++ A +VF M K+++SWN++I G MH +G AL +F +M+ G P
Sbjct: 213 ALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKP 272
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ TFI +L ACTH G+V +G+ YF M Y I P++EHYGCMVD+L RAG + +
Sbjct: 273 DGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAF 332
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
V K+P+EA +W LL AC + N EL ++ Q L+ELEP++P YV+LSNIY G+W
Sbjct: 333 VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRW 392
Query: 571 DEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
++V L+ M++ +K G SL+ ++++VE
Sbjct: 393 EDVARLKVAMRDTGFKKLPGCSLIE----VNDAVVE 424
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 122/276 (44%), Gaps = 34/276 (12%)
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
M A LFD +P ++ WN M GYA+ S R F M RNVV+W ++ Y+
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQ---SESYREIFCEMFERNVVAWTSMINGYILS 57
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI-KPDVLL 388
D RLFD A + L +++ + G I+ G + + + DV+
Sbjct: 58 ADLVSARRLFDL-----APERDVVLWNIMVS----GYIEGGDMVEARKLFHEMPNRDVMF 108
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
++L YA G ++ +F+ M E+N+ SWN++I GY +G + L F M
Sbjct: 109 WNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESD 168
Query: 449 T-PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR-- 505
PNDAT + VLSAC G + G W + ++ V ++D+ + G++
Sbjct: 169 VPPNDATLVTVLSACARLGALDLGKW-VHVYAESSGLKGNVYVGNALMDMYAKCGIIENA 227
Query: 506 -------DSEELVSKLPMEAGPALWGALLSACSTHS 534
D+++L+S W L+ + HS
Sbjct: 228 ISVFRGMDTKDLIS----------WNTLIGGLAMHS 253
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 10/228 (4%)
Query: 86 SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
++D + VLK T+ + +L LF + + E + F N ++ + F L +
Sbjct: 103 NRDVMFWNTVLKGYATNGNVEALEGLF-EEMPERNIFSWNALIGGYAHNGLFFEVLGSFK 161
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+ V N T + CA + +L GK VH G + +++V N+L+ MY+ C
Sbjct: 162 RMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKC 221
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMI 261
G + +A VF DL++WN++I G + A LF M D T+ ++
Sbjct: 222 GIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGIL 281
Query: 262 SGYVDVGDMEAANGLF-----DLMPFRDVVSWNCMIDGYAKIGNVTSA 304
+G +E F D + + + CM+D A+ G + A
Sbjct: 282 CACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQA 329
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 19/186 (10%)
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
M AR +FD + + N+ WNSM GY Q E E+F EM +R N + +++
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGY---AQSESYREIFCEMFER----NVVAWTSMING 53
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
+ ++ FDL E V + MV G M ++ +L ++P
Sbjct: 54 YILSADLVSARRLFDLAP-----ERDVVLWNIMVSGYIEGGDMVEARKLFHEMP-NRDVM 107
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEP-RDPGPYVLLSNIYASEGKWDEV-ENLRRI 579
W +L +T+ N E + L E P R+ + L YA G + EV + +R+
Sbjct: 108 FWNTVLKGYATNGNVE----ALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 163
Query: 580 MKEKEL 585
+ E ++
Sbjct: 164 LSESDV 169
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 316/585 (54%), Gaps = 45/585 (7%)
Query: 80 LLVSGLSQDSFAASRVLKKLCTSL---SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLND 136
++++GL +D FA+SR++ S ++LF + P+ F N ++ FL +
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILF--NTRNPNTFSWNVAIRGFLDSEN 58
Query: 137 PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRN 196
P A+ Y + + ++YT+PLL K CA + +R G ++ ++ GF+ D+FV N
Sbjct: 59 PREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSN 118
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER---- 252
++IH+ CG++ ARK+F+ V DLV+WNSMI+GYV+ G+A E +F E
Sbjct: 119 AVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR---GWAYEALNFYREMKVEG 175
Query: 253 ---DIFTWNSMISGYVDVGDMEAA---------NGLFDLMPFRDVVSWNCMIDGYAKIGN 300
D T ++S + D++ NGL +P N ++D Y K GN
Sbjct: 176 IKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA-----NALMDMYMKCGN 230
Query: 301 VTSARNCFDRMCMRNVVS----------------WNILLALYVRCKDYCECLRLFDRMIR 344
+ SAR FD M + +VS WN ++ YV E L LF+ M
Sbjct: 231 LESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQA 290
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ P+E +++S L+AC+ +G +D+G WIH YI+K + +V L T+L+ MYAKCG +
Sbjct: 291 MNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITK 350
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A VF + +N ++W ++I G +HG A+ F EM P++ TF+ +LSAC H
Sbjct: 351 AIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCH 410
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
G+V EG YF M + + PK++HY CMVDLLGRAGL+ ++EEL+ +P+EA +WG
Sbjct: 411 GGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWG 470
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
AL AC H N +G+ A L++++P D G YVLL+N+Y W E R++M+++
Sbjct: 471 ALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRG 530
Query: 585 LEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+EK G S + E IV + + +Y L ++ Q+++
Sbjct: 531 VEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLEL 575
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/547 (35%), Positives = 310/547 (56%), Gaps = 17/547 (3%)
Query: 59 PILQKLES-CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
P+L +L S CS+++ F QI TQL+ + +D ++V+ L S + S + I+
Sbjct: 7 PVLLELISRCSSLRVFKQIQTQLISRDILRDELFINKVVTFLGKSADFATYSSVILHSIR 66
Query: 118 EP-DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+F NT++ S+ + + P + F Y ++ + +TFP + K C +REG
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRMTI-FVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
K++H + K GF D++V+NSL+H Y VCGE +A KVF+ PV D+V+W +I G+ +
Sbjct: 126 KQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRT 185
Query: 237 REVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSW 288
G +E D + D+ T+ + VG + G+ L+ R + +
Sbjct: 186 ---GLYKEALDTFSKMDVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA- 347
N +ID Y K ++ A F + ++ VSWN +++ V C+ E + LF M
Sbjct: 243 NALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGI 302
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP+ L SVL+ACA++G +D G+W+H Y+ IK D + T+++ MYAKCG ++ A
Sbjct: 303 KPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALK 362
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F+ + KNV +WN+++ G +HG G ++L F EM K G PN TF+ +L+AC H G+
Sbjct: 363 IFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGL 422
Query: 468 VLEGWWYFDLMQ-RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
V EG YF M+ R Y + PK+EHYGC++DL RAGL+ ++ EL+ +P++ + GA+
Sbjct: 423 VDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVKPDVRICGAV 482
Query: 527 LSACSTHSN-SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LSAC + EL K + +E+E D G YVLLSNI+A+ +WD+V +RR+MK K +
Sbjct: 483 LSACKSRGTLMELPKEILDSFLEMEFEDSGVYVLLSNIFAANRRWDDVSRIRRLMKVKGI 542
Query: 586 EKAVGSS 592
K GSS
Sbjct: 543 SKVPGSS 549
>gi|147828480|emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 323/567 (56%), Gaps = 59/567 (10%)
Query: 60 ILQKLESCS-TVKEFHQIHTQLLVSGLSQ-DSFAASRVLKKLCTSLSSVSL---SVLFFD 114
++ KL + S +VK+ Q+H +L+ GLS + A ++L ++V+ SVL
Sbjct: 2 LISKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILJSASNYSATVAQYVHSVLHHS 61
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY-----TFPLLG--KVC 167
+ PD+F ++ F +++ A +V+ + TF L K C
Sbjct: 62 --KSPDSFSWACAIR--------FSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKAC 111
Query: 168 AGIRSLREGKKVHARIVKCGFELD---LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
A I G +H ++ K GF ++V +L+ Y G++ ARK+F++ ++V
Sbjct: 112 ARIAYRMGGLSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVV 171
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+WNSM+ GY+K+ ++ A+ +FD +P++D+ +WNSMISGY GDME A LF MP R+
Sbjct: 172 SWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERN 231
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY---C-------- 333
SWN MI GY + G++ SAR+ FD M N VSW +++ Y +C D C
Sbjct: 232 FASWNAMISGYVEFGDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVGG 291
Query: 334 --------------------ECLRLFDRMIRGD--AKPNEASLMSVLTACANMGVIDIGQ 371
E L+LF+ M+ D +P+E +L SV++AC+ +G + G
Sbjct: 292 KDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGP 351
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
WI SY+++ I+ D L+T+LL +YAKCG +D A +F + +K++V++ +MI+G G++G
Sbjct: 352 WIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGING 411
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ A+++F EM PN TFI +L+A HAG+V EG+ F M++ Y + P V+HY
Sbjct: 412 KAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSVDHY 470
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
G MVDLLGRAG ++++ EL+ +PM+ +WGALL AC H+N E G+I AQH ELEP
Sbjct: 471 GIMVDLLGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEP 530
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRR 578
G LLSNIYAS +WD+V+ LR+
Sbjct: 531 DTTGYXSLLSNIYASGERWDDVKRLRK 557
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 312/544 (57%), Gaps = 25/544 (4%)
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+L +F + + + N+I+ F D AL + + M + N TFP K
Sbjct: 37 NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQAL-YAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + L GK++H + G+ D+FV ++LI MYS CG + DARK+F++ P ++V+W
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155
Query: 227 NSMIDGYV---KNREVGFARELFDFMPERD-------IFTWNSMISGYVDVG-------- 268
SMI GYV + RE F + F + E D +S++ G V
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 269 DMEAANGLFDLMPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
E +GL F ++ N ++D YAK G ++ +R FD M +V SWN L+A+Y
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 328 RCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ E LF M+ RG+ + N +L +VL ACA+ G + IG+ IH + K ++ ++
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNL 335
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
++ TS++ MY KCG +++AR FD + KNV SW M+ GYGMHG G++A+++F EM +
Sbjct: 336 VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC 395
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G PN TF+ VL+AC+HAG++ EGW +F+ M+ + +EP +EHY CMVDLLGRAG +++
Sbjct: 396 GIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKE 455
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ L+ ++ ++ +WG+LL AC H N ELG+I A+ L +L+P + G YVLLSNIYA
Sbjct: 456 AYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYAD 515
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLV-HPGEFASESIVEN-CPPHRKCIVYSMLGEIG 624
G+WD+VE +R +MK L K G S+V H G + + P H K +Y L E+
Sbjct: 516 AGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEK--IYEYLDELN 573
Query: 625 AQMK 628
+++
Sbjct: 574 VKLQ 577
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
+S+S FDG++E D N+++ + A S + + + V +N T +
Sbjct: 249 ISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLL 308
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA +L+ GK +H ++VK E +L V S++ MY CG V ARK F+ ++ +
Sbjct: 309 ACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS 368
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAA----NGL- 276
W M+ GY + A ++F M I T+ S+++ G ++ N +
Sbjct: 369 WTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428
Query: 277 --FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
FD+ P + ++CM+D + G + A M ++ + + W LL
Sbjct: 429 CEFDVEP--GIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLG 477
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 292/505 (57%), Gaps = 18/505 (3%)
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+L+ F+ + + + N+++ D AL + + +FP K
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIP-TRSSFPCTIKS 2024
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + L G+ H + GFE DLFV ++LI MYS CG++ DAR +F++ P+ ++V+W
Sbjct: 2025 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSW 2084
Query: 227 NSMIDGYVKNREVGFARELF-DFMPER-----------DIFTWNSMISGYVDV---GDME 271
SMI GYV+N + A LF DF+ E D S++S V G E
Sbjct: 2085 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 2144
Query: 272 AANGLFDLMPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+G F + N ++D YAK G ++ FD M ++ +SWN ++A+Y +
Sbjct: 2145 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204
Query: 331 DYCECLRLFDRMIRG-DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
E L +F M+R + N +L +VL ACA+ G + G+ IH + K ++ +V +
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
TS++ MY KCG +++A+ FD M EKNV SW +M+ GYGMHG+ ++AL++F +M + G
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
PN TF+ VL+AC+HAG+V EGW +F+ M+ Y IEP +EHYGCMVDL GRAG + ++
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384
Query: 510 LVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGK 569
L+ ++ M+ +WG+LL AC H N +LG+I AQ L EL+P + G YVLLSN+YA G+
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444
Query: 570 WDEVENLRRIMKEKELEKAVGSSLV 594
W +VE +R +MK ++L K G SLV
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFSLV 2469
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 188/375 (50%), Gaps = 44/375 (11%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED--GP---VW 221
C + LR+ +HA+I++ G D + LIH+YS G + A +F P W
Sbjct: 37 CKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTW 93
Query: 222 DLVTWNSMIDGYVKNREV--------GFARELFDFMP----------------------- 250
+L+ + I+G + + G A + F F P
Sbjct: 94 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTF-PFVIKACTNFLSIDLGKVVHGSLI 152
Query: 251 ----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
D+F N++I Y G A +F+ M R+VVSW +I G G++ AR
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
FD + +NVVSW ++ Y+R + E L LF RM + PNE +++S++ AC MG+
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ +G+ IH Y K I+ V L T+L+ MY+KCG + A VF+ M K++ +WNSMI
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
G+HG G++AL +F EME+ P+ TFI VL AC H V EG YF M + Y I P
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392
Query: 487 KVEHYGCMVDLLGRA 501
EHY CM +L R+
Sbjct: 393 IPEHYECMTELYARS 407
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 175/382 (45%), Gaps = 42/382 (10%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C K QIH +++ SGLS D +R L L ++ ++ ++L F IQ P F
Sbjct: 34 LQNCKNFKHLRQIHAKIIRSGLSNDQLL-TRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N I+++ + AL Y+ M+ + + + +TFP + K C S+ GK VH +
Sbjct: 93 WNLIIRANTINGLSEQAL-MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K GF D+FV+N+LI Y CG A KVFE V ++V+W ++I G + ++ AR
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP---------------------- 281
+FD +P +++ +W +MI+GY+ E A LF M
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 282 -------FRDVVSWNC----------MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
D NC +ID Y+K G++ A F+ M +++ +WN ++
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIK 383
E L LF M R + KP+ + + VL AC ++ + G + Q I
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 384 PDVLLSTSLLTMYAKCGVMDLA 405
P + +YA+ +D A
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 290/535 (54%), Gaps = 71/535 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC-TSLSSVSLSVLFFDGIQEPDAF 122
LE CS +KE QIH QLL G ++ S +L L +++ + + FD I P+
Sbjct: 17 LERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTV 76
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ NT+++++ NDP AL Y++ M+ V HN YTFP L K C+
Sbjct: 77 IWNTMLRAYSNSNDPEAALLLYHQ-MLHNSVPHNSYTFPFLLKACS-------------- 121
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
A FE+ I ++ R G
Sbjct: 122 ----------------------------ALSAFEE---------TQQIHAHIIKRGFGL- 143
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
+++ NS++ Y G++++A+ LF+ +P RD+VSWN MIDGY K GN+
Sbjct: 144 ----------EVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLD 193
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
A F M +NV+SW ++ +VR + E L L +M+ KP+ +L L+ACA
Sbjct: 194 MAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACA 253
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G ++ G+WIH+YI+K IK D +L L MY KCG M+ A VF + +K V +W +
Sbjct: 254 GLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTA 313
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I G +HG+G +AL+ F +M+K G PN TF +L+AC+HAG+ EG F+ M +Y
Sbjct: 314 IIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVY 373
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
I+P +EHYGCMVDL+GRAGL++++ E + +P++ A+WGALL+AC H + ELGK +
Sbjct: 374 NIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEI 433
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ L+EL+P G Y+ L++IYA+ G+W++V +R +K + L L HPG
Sbjct: 434 GKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGL-------LNHPG 481
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA--R 406
PN ++L C+NM ++ Q ++K I+ + +ST LL YA+ +++LA R
Sbjct: 8 PNTEQTQALLERCSNMK--ELMQIHGQLLKKGTIRNQLTVST-LLVSYARIELVNLAYTR 64
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT--- 463
VFD+++ N V WN+M+ Y E AL ++ +M N TF +L AC+
Sbjct: 65 VVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALS 124
Query: 464 --------HAGMVLEGW----WYFDLMQRIYKIEPKVE 489
HA ++ G+ + + + R+Y I ++
Sbjct: 125 AFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQ 162
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 305/575 (53%), Gaps = 45/575 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL----CTSLSSVSLSVLFFDGIQEP 119
L SC T++ QIH Q+L S + + +++ S S++ ++ F I P
Sbjct: 19 LASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNP 78
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
N +++ F P LS Y F + ++FP L K + + +L G ++
Sbjct: 79 PTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGF-PLDRFSFPPLLKAVSKLSALNLGLEI 137
Query: 180 HARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
H K GF D F++++LI MY+ CG ++DAR +F+ D+VTWN MIDGY +N
Sbjct: 138 HGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAH 197
Query: 239 VGFARELFDFM------PERDIF---------------------------------TWNS 259
+L++ M P+ I S
Sbjct: 198 YDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTS 257
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
+++ Y + G M A ++D +P + +V M+ GYAK+G V AR FDRM +++V W
Sbjct: 258 LVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCW 317
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+ +++ Y E L+LF+ M R P++ +++SV++ACAN+G + +WIH+Y K
Sbjct: 318 SAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADK 377
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
+ ++ +L+ MYAKCG + AR VF+NM KNV+SW+SMI + MHG + A+ +
Sbjct: 378 NGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIAL 437
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
F M+++ PN TFI VL AC+HAG+V EG +F M ++I P+ EHYGCMVDL
Sbjct: 438 FHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYC 497
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
RA +R + EL+ +P +WG+L+SAC H ELG+ A L+ELEP G V+
Sbjct: 498 RANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVV 557
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
LSNIYA E +WD+V +R++MK K + K S +
Sbjct: 558 LSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRI 592
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 271/483 (56%), Gaps = 32/483 (6%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M+ V +TF L K C+ + L G+ VH I K GF+ +FV+ +L+ Y G+
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
+++AR+V FD M ERD+F W +MIS +
Sbjct: 61 IVEARRV-------------------------------FDEMSERDVFAWTTMISVHART 89
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
GDM +A LFD MP R+ SWN MIDGY+++ NV SA F +M R+++SW ++A Y
Sbjct: 90 GDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYS 149
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ K + E L +F+ M P+E ++ ++++ACA++G +D+G+ IH Y + DV
Sbjct: 150 QNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVY 209
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+ ++L+ MYAKCG +D + VF + +KN+ WNS+I G +HG E+AL MF M++
Sbjct: 210 IGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREK 269
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN TFI VL ACTHAG+V EG F M R + I P++EHYGCMVDLLG+AGL+ D+
Sbjct: 270 IKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDA 329
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
ELV + ME +WGALL C H N ++ ++ LEP + G Y LL N+YA
Sbjct: 330 LELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEV 389
Query: 568 GKWDEVENLRRIMKEKELEK-AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQ 626
+W EV N+R MKE +EK + GSS + + + +Y++L E+ Q
Sbjct: 390 NRWSEVANIRATMKELGVEKTSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQ 449
Query: 627 MKM 629
+K+
Sbjct: 450 LKL 452
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 11/234 (4%)
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
+ L +V + L F + D T++ + N F + +M ++ + T
Sbjct: 118 SRLRNVESAELLFSQMPNRDIISWTTMIACYSQ-NKQFREALAVFNEMQTNGIDPDEVTM 176
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
+ CA + +L GK++H ++ GF+LD+++ ++LI MY+ CG + + VF
Sbjct: 177 ATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRK 236
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL 276
+L WNS+I+G + A +F M I T+ S++ G +E
Sbjct: 237 KNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKR 296
Query: 277 F-----DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
F D ++ + CM+D K G + A M M N V W LL
Sbjct: 297 FLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLG 350
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/549 (36%), Positives = 315/549 (57%), Gaps = 25/549 (4%)
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF-VEHNHYT 159
+ ++ +L+ LF D + N+++ D +L + M K ++ N T
Sbjct: 27 AAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAF--SWMRKLDIKPNRST 84
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
FP K C+ + L GK+ H + + GFE DLFV ++LI MYS CG++ +AR +F++ P
Sbjct: 85 FPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP 144
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELF-DFMPER------------DIFTWNSMISGYVD 266
++VTW S+I GYV+N + A +F +F+ E+ D S++S
Sbjct: 145 RRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSR 204
Query: 267 VGDMEAANGLFDL---MPFRDVVSW-NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
V + + G+ + + V+ N ++D YAK G V+ +R FD M ++VVSWN +
Sbjct: 205 VSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSM 264
Query: 323 LALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
+A+Y + + +F M++ G K NE +L ++L ACA+ G + +G +H + K
Sbjct: 265 IAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMG 324
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
+V+++TS++ MY KCG ++ARN FD M EKNV SW +MI GYGMHG +AL++F
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFY 384
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M G PN TFI VL+AC+HAG + EGW +F+ M Y +EP VEHYGCMVDLLGRA
Sbjct: 385 QMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRA 444
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
G ++++ L+ + + LWG+LL+AC H + EL +I A+ L +L+P + G YVLL+
Sbjct: 445 GYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLA 504
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV--ENCPPHRKCIVYSM 619
NIYA G+W +VE +R ++K++ L K G SLV +V + P H K +Y
Sbjct: 505 NIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEK--IYKY 562
Query: 620 LGEIGAQMK 628
L E+ +++
Sbjct: 563 LEELSVKLQ 571
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 188/409 (45%), Gaps = 25/409 (6%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
++SCS + + + Q H Q LV G D F +S ++ + + +S + + FD I +
Sbjct: 89 IKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALI-DMYSKCGKLSNARVLFDEIPRRN 147
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV--------CAGIRS 172
+++ ++ +D AL + E + K + + V C+ + +
Sbjct: 148 IVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSN 207
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ VH +K G + + V N+L+ Y+ CGEV +RKVF+D D+V+WNSMI
Sbjct: 208 KAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAV 267
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMI----------SGYVDVGDMEAANGLFDLMPF 282
Y +N A E+F M + +N + G + VG M + + +
Sbjct: 268 YAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVG-MCLHDQVIKMGYV 326
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+V+ +ID Y K G ARN FD M +NV SW ++A Y E L +F +M
Sbjct: 327 NNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQM 386
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
I KPN + +SVL AC++ G ++ G +W ++ + ++P V ++ + + G
Sbjct: 387 IWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGY 446
Query: 402 MDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
+ A N+ +M ++ V W S++ +H E A E+ K P+
Sbjct: 447 IKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPS 495
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 311/565 (55%), Gaps = 39/565 (6%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDA 121
Q ++S ++K + H L+ + ++ + S V+K S S ++ + F I +P
Sbjct: 62 QIIKSGFSIKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLNKANFAFIQIGQPTL 121
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
+ N +++ +P A+ Y + M + + ++ TF L K C+ ++ + G+ H
Sbjct: 122 LIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHV 181
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+++K GF LF+ NSLI MY GE+ A+KVF+ DLV+WNS+I GY +
Sbjct: 182 QVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKE 241
Query: 242 ARELFDFMPER---------------------------------------DIFTWNSMIS 262
+LF+ M E D++ NS+I
Sbjct: 242 VLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLID 301
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
Y G ++ A +FD M +++VSWN M+ GYA G++ +A+ F+ M +RNV+SW +
Sbjct: 302 MYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCM 361
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
++ + + L+LF M+ + KP+E ++ SVL+AC+++G++D GQ +H Y+ + I
Sbjct: 362 ISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDI 421
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
K DV + +L+ MY KCGV+D A VF +M +K+ VSW SMI+G ++G + E+F +
Sbjct: 422 KSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQ 481
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M + G P +FI +L ACTHAG+V +G YF+ M+ +Y + P+++HYGC+VDLL R+G
Sbjct: 482 MLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSG 541
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSN 562
+ + E + ++P+ LW LLSAC H N L +I L+EL+P + G YVLLSN
Sbjct: 542 ELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSN 601
Query: 563 IYASEGKWDEVENLRRIMKEKELEK 587
YA +WD+ +R +M +++K
Sbjct: 602 TYAGSDRWDDASRMRDLMVVGDVQK 626
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/577 (34%), Positives = 326/577 (56%), Gaps = 21/577 (3%)
Query: 32 PKLWANEPKPKFTDT--DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDS 89
PK ++ FT +QR L+ +L L+ C++ K QIHTQ++++ + + +
Sbjct: 4 PKASSHLISRHFTKALAKSQRHAQQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPN 63
Query: 90 FAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFG-ALSFYYEKM 148
F R + L + + L F I P+ + N +++ F + FYY+
Sbjct: 64 FLLHRFI-----DLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQ-- 116
Query: 149 MAKF-VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M F + N++T+P + CA + L G+ H+ ++K G D VR+SLI MYS CGE
Sbjct: 117 MKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGE 176
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVK----NREVGFARELFDFMPERDIFTWNSMISG 263
+ AR+VF++ DLV+WNSMI GY + VG E+ D E D T S++
Sbjct: 177 LGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGA 236
Query: 264 YVDVGDMEAANGL--FDLMPFRDVVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
D+GD+ + + F + D+ S+ + +I Y K G+++SAR FDRM ++VV+W
Sbjct: 237 CGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTW 296
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
N ++ Y + E + LF M P++ +L+ VL+ACA++G +D G+W+ +Y +
Sbjct: 297 NAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASE 356
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
++ D+ +ST+L+ MYAKCG +D A VF++M +KN VSWN+MI HG+ +++L +
Sbjct: 357 RGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSL 416
Query: 440 FMEMEKRGPT--PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
F M K G PND +FI VLSAC HAG+V EG FDLM + + PK+EH+ CMVDL
Sbjct: 417 FKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDL 476
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
L RAG + ++ + + K+P + + GALL AC N ++ + V L+E+EP + G Y
Sbjct: 477 LARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNY 536
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ S I+A+ +WD+ +R +M+++ + K G S +
Sbjct: 537 IISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWI 573
>gi|115458312|ref|NP_001052756.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|32479728|emb|CAE01515.1| OJ991214_12.4 [Oryza sativa Japonica Group]
gi|113564327|dbj|BAF14670.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|125590342|gb|EAZ30692.1| hypothetical protein OsJ_14749 [Oryza sativa Japonica Group]
Length = 545
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/539 (35%), Positives = 301/539 (55%), Gaps = 5/539 (0%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P+ L C T + Q+H +++ GL +R C +LS S++ +
Sbjct: 9 SPPVATLLGRCRTARCLAQLHARIVRLGLHNHHALLAR-FAAACDALSCPSVAASLLS-V 66
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P + N ++ S L + P + + + ++FP L CA SL G
Sbjct: 67 AVP-VRLRNAVLAS-LARHAPLRDALAQFNLLRGGASRPDAFSFPPLLCACARASSLPTG 124
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+HA ++ G + DLFVR +LI Y CG AR +F+ V+W +++ YV +
Sbjct: 125 ASLHAAAIRLGVDADLFVRTALIQFYGRCGAAAAARALFDSLTNPSEVSWTAIVTAYVNS 184
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
++ ARELFD +P R++ WN+M+ GYV GD+E A LFD MP R ++ +I GY
Sbjct: 185 GDILTARELFDQIPHRNVVHWNAMVDGYVKCGDLEGARKLFDEMPERTPAAYTSLIGGYL 244
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
GN+ +AR FD++ R++ +W+ +++ + E LR+F+ + + P+E ++
Sbjct: 245 NAGNMGAARTLFDKLEDRDLFAWSTMISGCAQNGYPGEALRIFNEFQKQEICPDELVIVG 304
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+++AC+ +G I + +WI YI I +V + L+ M AKCG M+ A +F++M+ +
Sbjct: 305 LMSACSQLGNITLARWIEGYIMIYPIDMNNVHVMAGLINMNAKCGNMERATLLFESMSVR 364
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V S+ SM+ G+ +HG KA+E+F +M G TP++A F VL+AC+HAG+V EG YF
Sbjct: 365 DVFSYCSMMQGHCLHGSASKAVELFSQMLLEGITPDNAAFTVVLTACSHAGLVEEGKRYF 424
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
D+M+ Y I P +HY C+V LLGR G++RD+ EL+ +P E P WGALL C H +
Sbjct: 425 DMMKNEYMIVPSGDHYACLVSLLGRFGMLRDAYELIKSMPGEPHPGAWGALLGGCKFHCD 484
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
ELGKI A+ L E+EP + G YV LSNIYA+ +W V R M + + K G +LV
Sbjct: 485 IELGKIAAKKLFEIEPENAGNYVSLSNIYANIDRWGNVSETRAEMTGRGITKIAGCTLV 543
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 310/584 (53%), Gaps = 72/584 (12%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L L++C T+K+ QIHTQ++V+G SQ +F ++L TS + ++ +F +
Sbjct: 17 LQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVF-ER 75
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I+ P + N +++ P + Y +M+ E N +T+ L CA R LRE
Sbjct: 76 IENPSTTVWNQMIRGHSQSETPHKLVELY-NRMVEAEAEPNEFTYSFLIGGCARSRLLRE 134
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G++VH R+V G+ ++FVR SL+++Y++ G RK
Sbjct: 135 GEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRK---------------------- 172
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
AR +FD + +R+I +WNS+++GYV GD++ A +FD MP R+VVSW MI G
Sbjct: 173 ------ARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGC 226
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
A+IG RCK + L LF M R K ++ +L+
Sbjct: 227 AQIG----------------------------RCK---QALHLFHEMRRAGVKLDQVALV 255
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPD-----VLLSTSLLTMYAKCGVMDLARNVFD 410
+ L+ACA +G + +G WIHSYI + R+ V L+ SL+ MYA CGV+D A VF
Sbjct: 256 AALSACAELGDLKLGTWIHSYIDE-RLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFI 314
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP---TPNDATFICVLSACTHAGM 467
M +++ +SW SMI G+ G E+AL +F M++ G P+ TFI VL AC+HAG
Sbjct: 315 GMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGF 374
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V +G +F+ M + + I P++EHYGCMVDLL RAG + ++ L+ +PM+ A+WGALL
Sbjct: 375 VDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALL 434
Query: 528 SACSTHSNSELGKIVAQHL-MELEPRDPGPY-VLLSNIYASEGKWDEVENLRRIMKEKEL 585
C H N+EL VAQ L +EL+P Y VLLSN+YA+ +W +V +R+ M E +
Sbjct: 435 GGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGV 494
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
K G S V + + + VY ML +I Q K+
Sbjct: 495 RKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKITRQAKL 538
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/539 (35%), Positives = 293/539 (54%), Gaps = 36/539 (6%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC--TSLSSVSLSVLFFDGIQ 117
+++K + + + QIH L+V G++ R L C T + + FDGI
Sbjct: 1 MIRKGSARLSPRAVRQIHGHLVVGGIAAARLQHLRELLLSCVATFRGRMGYARKVFDGIP 60
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
PD FM N +++ + P A + Y A + + +TF L + CAG+ R G+
Sbjct: 61 RPDLFMHNAMVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGR 120
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH +VK GF D +VRN+LI+M++ CG++ A + ++ D+V W+++I G+
Sbjct: 121 QVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAARG 180
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
++ AR++FD +DI WN M+ Y G+ME A LFD P +DVVSWN +I GYA
Sbjct: 181 DMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAA 240
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G + A FD M W P+EA+++S+
Sbjct: 241 QGMLKHALEVFDEM---RAAGWT----------------------------PDEATIVSL 269
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
L+ CAN G++D G+ IH + R +P +++ +L++MYAKCG + A F+ M +
Sbjct: 270 LSCCANTGLLDAGRMIHHQLHLER-RPWISIVVGNALVSMYAKCGDLHTAVEGFNTMKDT 328
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V +WNS+I G HGQ E+++ F +M ++ PN+ +F+CVL AC+HAG+V +G +F
Sbjct: 329 DVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFF 388
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
LM+ Y IEP HY C+VD+LGRAGL+ ++ +VS + E +W LL AC TH N
Sbjct: 389 YLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGN 448
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
LGK+V + L+ + YVLLS IYAS G+W VE RR M + + KA G + +
Sbjct: 449 MTLGKLVREKLLNMNEDASADYVLLSGIYASSGEWLGVETERRSMDRRGIRKAAGYAQI 507
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 228/693 (32%), Positives = 357/693 (51%), Gaps = 113/693 (16%)
Query: 40 KPKFTDTDNQRLPIVDLSHPILQ-KLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
KP F P + LS IL+ L +C +K+F++I +Q++++G D+FAASR+LK
Sbjct: 32 KPTFK-------PTITLS--ILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKF 82
Query: 99 LCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
S + S+ FD I+ + FM NT+M++++ N AL Y+ M+ V ++
Sbjct: 83 STDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKAL-LLYKLMVKNNVGPDN 141
Query: 158 YTFPLL------------GK--------------------------VCAGIRSLRE---- 175
YT+PL+ GK VC +R R+
Sbjct: 142 YTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE 201
Query: 176 --------GKKVHARIVKCGF------------ELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ A VK G + ++ NS+I + G+V++A K+F
Sbjct: 202 SPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLF 261
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP------------------------- 250
+ D+V+W+++I GY +N A +F M
Sbjct: 262 NEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVK 321
Query: 251 --------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
E + N++I Y G++ A LF+ D +SWN MI G
Sbjct: 322 TGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCM 381
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G+V AR FD M +++VSW+ +++ Y + + E L LF M G +P+E L+S
Sbjct: 382 KCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVS 441
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
V++AC ++ +D G+W+H+YI+K +K +V+L T+LL MY KCG ++ A VF+ M EK
Sbjct: 442 VISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKG 501
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
V SWN++I+G ++G E++L+MF EM+ G PN+ TF+ VL AC H G+V EG +F
Sbjct: 502 VSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFA 561
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M + IEP V+HYGCMVDLLGRAGL+ ++E+L+ +PM A WGALL AC H ++
Sbjct: 562 SMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDT 621
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
E+G+ V + L+EL+P G +VLLSNI+AS+G W++V +R +MK++ + K G SL+
Sbjct: 622 EMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEA 681
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
E + + V ML E+ ++KM
Sbjct: 682 NGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKM 714
>gi|28558786|gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo subsp. melo]
Length = 565
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 308/560 (55%), Gaps = 30/560 (5%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGI 116
+ IL LE C T+KE QIH+ ++ + + ++ SR++ S L + + FD
Sbjct: 6 YTILSFLEKCKTMKELKQIHSLMIKTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQT 65
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+ ++ N+++K + D FGAL F YE+M K +H+TFP + KVC+ I L G
Sbjct: 66 DQLTVYVWNSMIKGYCNGGDKFGAL-FMYEEMQRKGFYPDHFTFPFVLKVCSAIDLLVYG 124
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+ VH RIVK GFELD++ + L++MY CG++ KVFE P W++V W S+I G+V N
Sbjct: 125 QSVHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNN 184
Query: 237 REVGFARELFDFMPE--------------------RDIFTWNSMISGYVDVG-DMEAANG 275
+ A LF M RDI T + +G D N
Sbjct: 185 DQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLRQLGLDPFHTNS 244
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
F+ V+ ++D YAK G + +ARN FD+M RN+V WN +++ + + E
Sbjct: 245 RFN------VILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYGRGAEA 298
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
LRLF M PN+A+ +SV+ AC ++ GQ +H+ + K V + T+L+ M
Sbjct: 299 LRLFVDMELAGFVPNKATFLSVIRACTHLRFRSTGQSLHARVLKANFHEFVAIGTALMDM 358
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP-TPNDAT 454
YAK G D A +F + +K+V++W +MI G + G+G++AL +F ME+ P+ T
Sbjct: 359 YAKSGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQIT 418
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+I VL AC+H G+V EG +F M +Y IEP +EHYGCM+DLL RAG ++EEL+ K+
Sbjct: 419 YIAVLWACSHLGLVEEGQKHFTSMMEVYGIEPTMEHYGCMIDLLSRAGHSEEAEELLVKM 478
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
P + + ++L+ C + N L V H++EL+ G YVLLSNI+A W+E++
Sbjct: 479 PTQPNATILSSILNGCEMYGNVGLANRVKSHIVELKNSSSGVYVLLSNIHAKACNWEEMK 538
Query: 575 NLRRIMKEKELEKAVGSSLV 594
R I+K K++ K +G+S V
Sbjct: 539 LARDILKHKKIGKTLGNSFV 558
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/547 (36%), Positives = 310/547 (56%), Gaps = 16/547 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ + CS+++ F QI TQL+ L +D ++V+ L S S S + I+
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 120 -DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
+F NT++ S+ + + P + F Y+ ++ + +TFP + K C +REGK+
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTI-FAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H + K GF D++V+NSL+H Y VCGE +A KVF + PV D+V+W +I G+ +
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT-- 185
Query: 239 VGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNC 290
G +E D + D+ T+ ++ VG + G+ L+ R + + N
Sbjct: 186 -GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA 244
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKP 349
+ID Y K ++ A F + ++ VSWN +++ V C+ E + LF M KP
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ L SVL+ACA++G +D G+W+H YI IK D + T+++ MYAKCG ++ A +F
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
+ + KNV +WN+++ G +HG G ++L F EM K G PN TF+ L+AC H G+V
Sbjct: 365 NGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 470 EGWWYFDLMQ-RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M+ R Y + PK+EHYGCM+DLL RAGL+ ++ ELV +P++ + GA+LS
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILS 484
Query: 529 ACSTHSN-SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC EL K + +++E D G YVLLSNI+A+ +WD+V +RR+MK K + K
Sbjct: 485 ACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISK 544
Query: 588 AVGSSLV 594
GSS +
Sbjct: 545 VPGSSYI 551
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 301/551 (54%), Gaps = 48/551 (8%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQE 118
+L KL+ S+VKE Q + SGL F S+++ L S L S+ + F+
Sbjct: 115 LLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAM 174
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG-- 176
+ F+CNT+++++ P A+ + Y M K ++ +H+T+P K CA + EG
Sbjct: 175 DNPFVCNTMIRAYAKSVFPIKAI-YLYNFMHRKDIKSDHFTYPFGLKACARVLWCNEGDI 233
Query: 177 -----------KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
++H R+ + G + D F++NSL+++YS CG F D
Sbjct: 234 KCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCG--------FLD-------- 277
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
AR +FD M E+ I +WN MIS Y + D ++A+ L MP ++V
Sbjct: 278 ---------------LARCVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNV 322
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
VSWN +I Y ++G + A+ F M R+ VSWN ++A YV+ KDY L LF M
Sbjct: 323 VSWNMLIARYIRLGKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIA 382
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+ + + +L+SVL ACA G ++IG+ IH +++ K + LS +L+ MYAKCG ++LA
Sbjct: 383 NVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLA 442
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF--MEMEKRGPTPNDATFICVLSACT 463
VF + K++ WN+MI+ +HG E+AL +F MEM G PN TFI VL AC+
Sbjct: 443 WEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACS 502
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V EG +F+ M YKI P ++HYGCMVDLL R GL++++ ++ +P EA LW
Sbjct: 503 HKGLVDEGRTFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLW 562
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
LL AC H + +L + Q L ++EP G YVLLSNIYA +W++VE +R M
Sbjct: 563 RTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGS 622
Query: 584 ELEKAVGSSLV 594
+ K GSS +
Sbjct: 623 GVPKKPGSSHI 633
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/577 (35%), Positives = 313/577 (54%), Gaps = 34/577 (5%)
Query: 80 LLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPF 138
++++GL D FA+SR++ S S ++ V GI+ P+AF N ++ F +P
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPK 60
Query: 139 GALSFYYEKMMAKFVEH--NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRN 196
A+ Y + + E +H+T+P+L KVCA +R G + + K EL V N
Sbjct: 61 DAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHN 120
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER---- 252
+ IHM++ CGE+ +ARKVF++ PV DLV+WN +I+GY K E A E++ M
Sbjct: 121 ASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKP 180
Query: 253 DIFTWNSMISGYVDVGDME---------AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
D T ++S +GD+ ANGL +P N ++D ++K G++
Sbjct: 181 DDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLA-----NALMDMFSKCGDIHE 235
Query: 304 ARNCFDRMCMRNVVS-------------WNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
AR FD + R +VS WN ++ V+ K + L LF M + P+
Sbjct: 236 ARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPD 295
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
E +++ L+AC+ +G +D+G WIH YI+K + +V L TSL+ MYAKCG + A VF
Sbjct: 296 EITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFH 355
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+ +N +++ ++I G +HG A+ F EM G P++ TFI +LSAC H GM+
Sbjct: 356 GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 415
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G YF M+ + + P+++HY MVDLLGRAGL+ ++++L+ +PMEA A+WGALL C
Sbjct: 416 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGC 475
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N +LG+ A+ L+EL+P D G YVLL +Y W++ + RR+M E+ +EK G
Sbjct: 476 RMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPG 535
Query: 591 SSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
S + SE IV + +Y L +G M
Sbjct: 536 CSSIEVNGIVSEFIVRDKSRPESEKIYDCLHCLGTHM 572
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 311/565 (55%), Gaps = 40/565 (7%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDA 121
+ + + +++ ++H QL+ + + D + S V+K S S+ + F+ IQ P
Sbjct: 19 RAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTL 78
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
+ N ++ + P A+ FY M K ++ +H TF L K CA + +R+G+ V
Sbjct: 79 LVWNHMIHGLSKSDRPNDAIHFY-NTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRV 137
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+K GFE LFV N+LIHMY GE+ A+KVF+ D+V+WNS+I GY +
Sbjct: 138 HSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKK 197
Query: 242 ARELFD----------------------FMPE-----------------RDIFTWNSMIS 262
+LF F+ E D++ N++I
Sbjct: 198 VLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLID 257
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
Y G ++ A +F M +++VSWN MI GYAK+GN+ +A+ F+ M R+V+SW +
Sbjct: 258 MYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSM 317
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+ Y K + E ++LF M+ KP+E ++ + L+ACA++G +D G+ +H YI+K I
Sbjct: 318 IIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDI 377
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
K DV + SL+ MY KCGV++ A VF++M ++ VSW S+I G ++G E AL +F +
Sbjct: 378 KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQ 437
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M K G P TF+ VL AC H G+V +G +F M+ Y++ P+++HYGC+VDLL R+G
Sbjct: 438 MLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSG 497
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSN 562
+ + + K+P+ +W LLSAC H N L +IV++ L+ L+P + G YVL S+
Sbjct: 498 YLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSS 557
Query: 563 IYASEGKWDEVENLRRIMKEKELEK 587
YA +WD+V +R++M+ L+K
Sbjct: 558 TYAGSDRWDDVIKIRKLMEVTNLQK 582
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 184/423 (43%), Gaps = 50/423 (11%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL-DARKVFED 217
TF + + SL K++HA++V+ +D + +I Y++ + L A VF
Sbjct: 13 TFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQ 72
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAA 273
L+ WN MI G K+ A ++ M + I T+ + V D+
Sbjct: 73 IQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQG 132
Query: 274 NGL--------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+ F+ F N +I Y G + A+ FD M R+VVSWN ++
Sbjct: 133 QMVRVHSMKLGFESYLFVS----NALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICG 188
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y + + + L LF M + + + ++M ++A + ++G ++ YI + + D
Sbjct: 189 YYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVD 248
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG-------------- 431
+ L +L+ MY + G++D A VF M EKN+VSWN+MIMGY G
Sbjct: 249 LYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPS 308
Query: 432 -----------------QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
Q +A+++F EM P++ T LSAC H G + G
Sbjct: 309 RDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAV 368
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
D +++ + I+ V ++D+ + G++ + ++ + + + W +++S + +
Sbjct: 369 HDYIRK-HDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVS-WTSIISGLAVNG 426
Query: 535 NSE 537
+E
Sbjct: 427 FAE 429
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 344/615 (55%), Gaps = 36/615 (5%)
Query: 32 PKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFA 91
+LW+N + F ILQ ++ T K +IH +L + L +
Sbjct: 2 SQLWSNTERKCFN---------------ILQSSKT-KTFKTLLEIHAFILRNSLHNNLHL 45
Query: 92 ASRVLK----------KLCTSLSSVSLSVLFFDGI--QEPDAFMCNTIMKSFLMLNDPFG 139
++ + + ++S V + LFF+ + D F+CNTI+ + L
Sbjct: 46 LTKFISSSTSLALSTPRRNDAVSIVQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNH 105
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
+ Y + F + YTF L+ K C+ + R+G ++H ++K F LDL+V SL+
Sbjct: 106 GFTLYNQFSKDCFFRPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLV 165
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNS 259
MY G+V ARKVF++ V LV+W ++I GY + ++ AR+LFD M +RD+ +N
Sbjct: 166 DMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNV 225
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
MI GYV +G M+ A LFD M ++V+SW M+ GY++ G+V AR FD M +NV+SW
Sbjct: 226 MIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSW 285
Query: 320 NILLALYVRCKDYCECLRLFDRMIRG--DAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
N ++ Y + + L+LF M RG D + NE +++SVL A A++ +D+G W+H ++
Sbjct: 286 NAMIRGYCQNGRSHDALKLFCEM-RGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFV 344
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
Q+ ++ V + +L+ MYAKCG + A+ VF+ MTEK+ SWN++I GYG++G ++AL
Sbjct: 345 QRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEAL 404
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
E+F M + G PN T VLSAC H G+V EG F+ M+R + I P++EHYGCM+DL
Sbjct: 405 EVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-FGIVPQIEHYGCMIDL 463
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG + ++E+L+ +P + + + L AC + + + + +++E G Y
Sbjct: 464 LGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERILKVAVKMEKEGAGDY 523
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFAS--ESIVENCPPHRKC 614
V+L N+YA+E +W +VE+++ +MK++ K V S++ G F + H +
Sbjct: 524 VMLRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEVDGRFREFVAGYYSHSHSHLEA 583
Query: 615 IVYSMLGEIGAQMKM 629
I S LG++ MK+
Sbjct: 584 I-QSTLGQLWKHMKV 597
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 325/559 (58%), Gaps = 11/559 (1%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDS---FAASRVLKKLCTSL--SSVSLSVLFF 113
P+ Q L + + QIH L + L Q++ F + + L S S++ + F
Sbjct: 12 PLNQFLNNAKNISHLKQIHA-LFLKHLPQNAPHHFFDRLLFRVLHFSAEKSNLYYAHKLF 70
Query: 114 DGIQE-PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
D + + F+ +++++FL + F + M K + + +TF + C + +
Sbjct: 71 DTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPA 130
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ EGK+VHAR+V+ GF + V+ +L+ MY+ CG V DAR VF+ D+V W +MI G
Sbjct: 131 VFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICG 190
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
Y K + AR LFD M ER+ FTW +M++GY + GDM+AA L+D+M ++ V+W MI
Sbjct: 191 YAKAGRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMI 250
Query: 293 DGYAKIGNVTSARNCFDRMCM-RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
GY K+GNV+ AR FD + + N + LLA Y + E + ++++M R K +
Sbjct: 251 AGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTD 310
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+++ ++ACA + I + + I++ + ++S +L+ M +KCG +DLA F+
Sbjct: 311 VAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNI 370
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M +++ ++++MI + HG+ + A+++F++M++ G TPN TF+ VL+AC+ +G++ EG
Sbjct: 371 MRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEG 430
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+F +M +Y IEP EHY CMVDLLGRAG + + L+ + A WG+LL+AC
Sbjct: 431 CRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACR 490
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
+ N ELG+I A+HL E++P D G YVLL+N YAS KW+ E ++++M +K ++K G
Sbjct: 491 VYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSGY 550
Query: 592 SLVH---PGEFASESIVEN 607
S + G++ E+ + N
Sbjct: 551 SWIQRETKGQYQEEARLLN 569
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 264/438 (60%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N++I Y+ G++ A+++F + P+ D+ TW +M+ GYV+N V AR+ FD MP
Sbjct: 231 DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP 290
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
++ ++N+M++GYV M A LF+ MP R++ SWN MI GY + G + AR FD
Sbjct: 291 VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDM 350
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW +++ Y + Y E L +F M R N ++ L+ CA++ +++G
Sbjct: 351 MPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELG 410
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H + K + + +LL MY KCG D A +VF+ + EK+VVSWN+MI GY H
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARH 470
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G G +AL +F M+K G P++ T + VLSAC+H+G++ G YF M R Y ++P +H
Sbjct: 471 GFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKH 530
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CM+DLLGRAG + ++E L+ +P + G A WGALL A H N+ELG+ A+ + ++E
Sbjct: 531 YTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKME 590
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P++ G YVLLSN+YA+ G+W +V +R M+E ++K G S V V +C
Sbjct: 591 PQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFH 650
Query: 611 HRKCIVYSMLGEIGAQMK 628
K +Y+ L E+ +M+
Sbjct: 651 PEKDRIYAFLEELDLKMR 668
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 185/396 (46%), Gaps = 62/396 (15%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N I + G A +VF P V++N+MI GY++N + AR+LFD MP
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ERD+F+WN M++GYV + A+ LFDLMP +DVVSWN M+ GYA+ G V AR F++
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNK 164
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RN +SWN LLA YV E RLF+
Sbjct: 165 MPHRNSISWNGLLAAYVHNGRLKEARRLFESQ---------------------------S 197
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
W +++ L+ Y K ++ AR +FD M ++V+SWN+MI GY
Sbjct: 198 NW------------ELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQV 245
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G +A +F E P + T+ ++S GMV E YFD M +I
Sbjct: 246 GDLSQAKRLFNE----SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEIS----- 296
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGP----ALWGALLSACSTHSNSELGKIVAQHL 546
Y M+ AG ++ + +++ EA P + W +++ + G A+ L
Sbjct: 297 YNAML-----AGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNG----GIAQARKL 347
Query: 547 MELEP-RDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
++ P RD + + + YA G ++E N+ MK
Sbjct: 348 FDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMK 383
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 62/326 (19%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I Y + AR +F+ P DL +WN M+ GYV+NR +G A +LFD MP++D+
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV 140
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFR-------------------------------D 284
+WN+M+SGY G ++ A +F+ MP R +
Sbjct: 141 SWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWE 200
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR--- 341
++SWNC++ GY K + AR FDRM +R+V+SWN +++ Y + D + RLF+
Sbjct: 201 LISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPI 260
Query: 342 --------MIRG--------------DAKP--NEASLMSVLTACANMGVIDIGQWIHSYI 377
M+ G D P NE S ++L + I + +
Sbjct: 261 RDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAM 320
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
CR ++ +++T Y + G + AR +FD M +++ VSW ++I GY +G E+AL
Sbjct: 321 -PCR---NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEAL 376
Query: 438 EMFMEMEKRGPTPNDATFICVLSACT 463
MF+EM++ G + N +TF C LS C
Sbjct: 377 NMFVEMKRDGESSNRSTFSCALSTCA 402
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 140 ALSFYYEKMMAKFVE-------HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
A + +YE+ + FVE N TF CA I +L GK+VH ++VK GFE
Sbjct: 367 AQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGC 426
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE---LFDFM 249
FV N+L+ MY CG +A VFE D+V+WN+MI GY ++ GF R+ LF+ M
Sbjct: 427 FVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARH---GFGRQALVLFESM 483
Query: 250 PER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV------VSWNCMIDGYAKIG 299
+ D T ++S G ++ F M RD + CMID + G
Sbjct: 484 KKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMD-RDYNVKPTSKHYTCMIDLLGRAG 542
Query: 300 NVTSARNCFDRMCMR-NVVSWNILLA 324
+ A N M SW LL
Sbjct: 543 RLEEAENLMRNMPFDPGAASWGALLG 568
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
PD++ ++ + + G D A VF++M ++ VS+N+MI GY + + A ++F +M
Sbjct: 44 PDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM 103
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
P + ++ +L+ + E FDLM + V + M+ + G
Sbjct: 104 ----PERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPK-----KDVVSWNAMLSGYAQNGF 154
Query: 504 MRDSEELVSKLPMEAGPALWGALLSA 529
+ ++ E+ +K+P + W LL+A
Sbjct: 155 VDEAREVFNKMPHRNSIS-WNGLLAA 179
>gi|116309337|emb|CAH66421.1| H0622F05.4 [Oryza sativa Indica Group]
gi|116309402|emb|CAH66479.1| OSIGBa0137L20.8 [Oryza sativa Indica Group]
Length = 545
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/539 (35%), Positives = 300/539 (55%), Gaps = 5/539 (0%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P+ L C T + Q+H +++ GL +R C +LS S+ +
Sbjct: 9 SPPVATLLGRCRTARCLAQLHARIVRLGLHNHHALLAR-FAAACDTLSCPSVVASLLS-V 66
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P + N ++ S L + P + + + ++FP L CA SL G
Sbjct: 67 AVP-VRLRNAVLAS-LARHAPLRDALAQFNLLRGGASRPDAFSFPPLLCACARASSLPTG 124
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+HA ++ G + DLFVR +LI Y CG AR +F+ V+W +++ YV +
Sbjct: 125 ASLHAAAIRLGVDADLFVRTALIQFYGRCGAAAAARALFDSLTNPSEVSWTAIVTAYVNS 184
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
++ ARELFD +P R++ WN+M+ GYV GD+E A LFD MP R ++ +I GY
Sbjct: 185 GDILTARELFDQIPHRNVVHWNAMVDGYVKCGDLEGARKLFDEMPERTPAAYTSLIGGYL 244
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
GN+ +AR FD++ R++ +W+ +++ + E LR+F+ + + P+E ++
Sbjct: 245 NAGNMGAARTLFDKLEDRDLFAWSTMISGCAQNGYPGEALRIFNEFQKQEICPDELVIVG 304
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+++AC+ +G I + +WI YI I +V + L+ M AKCG M+ A +F++M+ +
Sbjct: 305 LMSACSQLGNITLARWIEGYIMIYPIDMNNVHVMAGLINMNAKCGNMERATLLFESMSVR 364
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V S+ SM+ G+ +HG KA+E+F +M G TP++A F VL+AC+HAG+V EG YF
Sbjct: 365 DVFSYCSMMQGHCLHGSASKAVELFSQMLLEGITPDNAAFTVVLTACSHAGLVEEGKRYF 424
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
D+M+ Y I P +HY C+V LLGR G++RD+ EL+ +P E P WGALL C H +
Sbjct: 425 DMMKNEYMIVPSGDHYACLVSLLGRFGMLRDAYELIKSMPGEPHPGAWGALLGGCKFHCD 484
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
ELGKI A+ L E+EP + G YV LSNIYA+ +W V R M + + K G +LV
Sbjct: 485 IELGKIAAKKLFEIEPENAGNYVSLSNIYANIDRWGNVSETRAEMTGRGITKIAGCTLV 543
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 202/589 (34%), Positives = 328/589 (55%), Gaps = 48/589 (8%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFF 113
++HP+L LESC++ + Q+ L VSGL+ F ASR+L L + +
Sbjct: 30 VTHPLLSLLESCASFRRLLQLQALLTVSGLAAHRFPASRLLAFCALSDPPRLAHAAAVLA 89
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+ P+A+M T+M+ FL P AL+ + + + ++ V A S
Sbjct: 90 QCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADAR---TIVFAVKAATTSS 146
Query: 174 REGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ +H K GF + V N+L+HMY+ + DARK+F++ D+V+W +++DG
Sbjct: 147 SPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDG 206
Query: 233 YVKN---------------------REV---------------GFARELFDFMPERDIFT 256
Y + EV G R + + E +
Sbjct: 207 YARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRM 266
Query: 257 W----NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
N+++ + G + +A +FD MP +DV SW M+ YAK G++ +A F +
Sbjct: 267 SVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIP 326
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RN VSW+ ++A Y + E +R+F+ MI +P +A+L+SVL+ACA +G +D+G+
Sbjct: 327 NRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRC 386
Query: 373 IH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
++ +YI +++ V LS + + M+AKCG + A +F NM +KNVVSWN+MI+ + +HG
Sbjct: 387 LYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHG 446
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
Q E+AL +F + + G P++ T+I VLSAC+H+G+V EG ++F M+ +Y IEP+ EHY
Sbjct: 447 QSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHY 506
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
CM+DLLG+ GL+ ++ E+ +P+ A A WGALL+AC H N E+GK A L+ L+P
Sbjct: 507 ACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDP 566
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGEF 599
D G YVL+S IYAS+ KW +V+ +R +M+++ ++K G SS+ G+F
Sbjct: 567 SDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKF 615
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 293/533 (54%), Gaps = 33/533 (6%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAF 122
L +C ++K Q+H + +GL D A ++L S+ ++ + F PD F
Sbjct: 12 LTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVF 71
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
M NT+++ + P +L + E + ++F L K A RSL G ++H +
Sbjct: 72 MHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQ 131
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+ G + LFV +L+ MYS CG V FA
Sbjct: 132 AIVHGLDTHLFVGTTLVSMYSECGFV-------------------------------AFA 160
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
+++F+ M E ++ WN++++ GD++ A+ +F+ MPFR++ SWN M+ GY K G +
Sbjct: 161 KKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELE 220
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR F M +++ VSW+ ++ + + E F + + +PNE SL L+ACA
Sbjct: 221 LARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACA 280
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWN 421
+ G I+ G+ +H +I+K V ++ +LL Y+KCG + +AR VF+ M EK ++VSW
Sbjct: 281 DAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWT 340
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
SMI G MHG GE+A+++F EME+ G P+ FI +L AC+HAG++ +G+ YF M+ I
Sbjct: 341 SMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDI 400
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y IEP +EHYGCMVDL GRAG + + E + +P+ +W LL ACS H N +L +
Sbjct: 401 YNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAER 460
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
V + L EL+P + G +VLLSNIYA GKW +V +RR M ++ + K G S++
Sbjct: 461 VKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMI 513
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 275/436 (63%), Gaps = 3/436 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ M + CG + +AR++F+ P D+++W +MI G KN + AR LFD MPER++
Sbjct: 181 NTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVV 240
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MI+GY ++ A LF+ MP RD+ SWN MI G + G++ AR F+ M +N
Sbjct: 241 SWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKN 300
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVIDIGQWIH 374
V+SW ++ V+ + E L++F RM+ + AKPN+ + +SVL AC+N+ + GQ +H
Sbjct: 301 VISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVH 360
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQ 432
I K + + ++L+ MY+KCG + AR +FD+ +++++VSWN +I Y HG
Sbjct: 361 QIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGY 420
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G++A+ F EM K G P+D T++ +LSAC+HAG+V EG YFD + + I + +HY
Sbjct: 421 GKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYA 480
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VDL GRAG ++++ + +L + +WGALL+ C+ H+N ++GK A+ L+E+EP
Sbjct: 481 CLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPE 540
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+ G Y+LLSNIYAS GKW E +R MK+K L+K G S + G +V + +
Sbjct: 541 NAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQ 600
Query: 613 KCIVYSMLGEIGAQMK 628
++YS+L ++ ++MK
Sbjct: 601 SKLIYSLLRDLHSKMK 616
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 170/322 (52%), Gaps = 40/322 (12%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM-PERDI 254
N +I S G +++AR++F++ D++TW ++I GY+K + AR LFD + ++++
Sbjct: 56 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 115
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
TW +M+ GY+ + A LF+ MP ++VVSWN MIDGYA+ G + SA F++M R
Sbjct: 116 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPER 175
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID------ 368
NVVSWN ++++ +C E RLFDRM D S +++ + G ID
Sbjct: 176 NVVSWNTVMSMLAQCGRIEEARRLFDRMPERDV----ISWTAMIAGLSKNGRIDEARLLF 231
Query: 369 -------IGQW---IHSYIQKCRI-----------KPDVLLSTSLLTMYAKCGVMDLARN 407
+ W I Y Q R+ + D+ +++T + G + AR
Sbjct: 232 DRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARK 291
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDATFICVLSACTHAG 466
+F+ M +KNV+SW +MI G G+ E+AL++F M G PN TF+ VL AC++
Sbjct: 292 LFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLA 351
Query: 467 MVLEGWWYFDLMQRIYKIEPKV 488
+ EG Q++++I K
Sbjct: 352 GLGEG-------QQVHQIISKT 366
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 178/392 (45%), Gaps = 35/392 (8%)
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
DF + ++ N MI+ G + A LFD M DV++W +I GY K G + AR
Sbjct: 45 DFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARR 104
Query: 307 CFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FDR+ +NVV+W ++ Y+R + +LF+ M N S +++ A G
Sbjct: 105 LFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM----PNKNVVSWNTMIDGYAQNG 160
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
ID ++ + + +V+ ++++M A+CG ++ AR +FD M E++V+SW +MI
Sbjct: 161 RIDSAMYLFEKMP----ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIA 216
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
G +G+ ++A +F M P N ++ +++ + E DL +R+ E
Sbjct: 217 GLSKNGRIDEARLLFDRM----PERNVVSWNAMITGYAQNLRLDEA---LDLFERM--PE 267
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
+ + M+ L + G +R + +L +++P + W +++ C SE +
Sbjct: 268 RDLPSWNTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTMITGCVQEGESEEALKIFSR 326
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
++ P +S + A NL + + +++ + + ++ F +++
Sbjct: 327 MLSTNGAKPNQGTFVSVLGA-------CSNLAGLGEGQQVHQIISKTVYQDSTFVVSALI 379
Query: 606 ENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQ 637
+YS GE+G KM + SQ
Sbjct: 380 N---------MYSKCGELGTARKMFDDGMTSQ 402
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
AL + + + N TF + C+ + L EG++VH I K ++ FV ++LI
Sbjct: 320 ALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALI 379
Query: 200 HMYSVCGEVLDARKVFEDGPV--WDLVTWNSMIDGYVKNREVGFARELFDFMPER----- 252
+MYS CGE+ ARK+F+DG DLV+WN +I Y + G+ +E +F E
Sbjct: 380 NMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHH---GYGKEAINFFKEMRKSGF 436
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFD-LMPFRDVV----SWNCMIDGYAKIGNVTSAR 305
D T+ ++S G +E FD L+ R ++ + C++D + G + A
Sbjct: 437 KPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAF 496
Query: 306 NCFDRMCMR-NVVSWNILLA 324
+R+ + + W LLA
Sbjct: 497 GFIERLETKPSARVWGALLA 516
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 181/491 (36%), Positives = 284/491 (57%), Gaps = 52/491 (10%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y M +E + + P + K C+ I R GK++H VK G D+FV N+L+ MYS
Sbjct: 97 YTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSE 156
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
CG ++ AR +F+ D+V+W++MI Y+ LF +R I +W +MI+GY
Sbjct: 157 CGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWTAMIAGY 207
Query: 265 VDVGDMEAANGLF-----------DLMPFRDVVS-------------------------- 287
+ D+E LF D+ ++S
Sbjct: 208 IRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267
Query: 288 --WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR--CKDYCECLRLFDRMI 343
++D Y K G + SAR FD M ++V++W +++ Y + C DY +LF +M
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYA--FQLFVQMR 325
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+PNE +++S+L+ CA G +D+G+W H+YI K ++ DV+L T+L+ MYAKCG +
Sbjct: 326 DNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDIS 385
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A+ +F ++++ +WN M+ GYGMHG GEKAL++F EME G PND TFI L AC+
Sbjct: 386 GAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACS 445
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HAG+V+EG F+ M + + PKVEHYGCMVDLLGRAGL+ ++ +++ +P+ A+W
Sbjct: 446 HAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIW 505
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GA+L+AC H NS +G++ A+ L+ LEP++ G VL+SNIYA+ +W++V +R+ +K+
Sbjct: 506 GAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDT 565
Query: 584 ELEKAVGSSLV 594
++K G S +
Sbjct: 566 GIKKEPGMSSI 576
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 209/458 (45%), Gaps = 59/458 (12%)
Query: 38 EPKPKF---TDTDNQRLPIVDLSHPILQKLESCSTV---KEFHQIHTQLLVSGLSQDSFA 91
E P++ T T ++L I S I L++CS + + +IH + +GL D F
Sbjct: 87 ESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFV 146
Query: 92 ASRVLKKL--CTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY---- 145
+ +++ C SL S L FD + E D +T++++++ L F S
Sbjct: 147 VNALMQMYSECGSLVSAR---LLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAM 203
Query: 146 -------------EKMMAKFVEHNHY----TFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
E++ + +E N + T L C + +++ GK++HA I++ GF
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGF 263
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
+ L + +L+ MY CGE+ AR +F+ D++TW +MI Y + + +A +LF
Sbjct: 264 GMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQ 323
Query: 249 MPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPF-----------RDVVSWNCMID 293
M + + T S++S + A NG D+ + DV+ +ID
Sbjct: 324 MRDNGVRPNELTMVSLLS-------LCAVNGALDMGKWFHAYIDKQGVEVDVILKTALID 376
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
YAK G+++ A+ F R++ +WN+++A Y + L+LF M KPN+ +
Sbjct: 377 MYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDIT 436
Query: 354 LMSVLTACANMGVIDIGQWI-HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ L AC++ G++ G+ + I + P V ++ + + G++D A + ++M
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496
Query: 413 -TEKNVVSWNSMIMGYGMH---GQGEKALEMFMEMEKR 446
N+ W +M+ +H GE A + +E +
Sbjct: 497 PVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQ 534
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L + M + D + + + SVL AC+ + V +G+ IH + K + DV + +L+ M
Sbjct: 94 LNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQM 153
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG---------------------- 433
Y++CG + AR +FD M+E++VVSW++MI Y G
Sbjct: 154 YSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDL 213
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
E+ +F+ M + PND T + ++ +C G V G + R +
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILR-NGFGMSLALATA 272
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+VD+ G+ G +R + + + W A++SA
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 299/554 (53%), Gaps = 61/554 (11%)
Query: 80 LLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI-QEPDAFMCNTIMKSFLMLNDPF 138
+L+ L D+ SR + C+SL S + F I PD ++ N I+K+
Sbjct: 1 MLLRALDTDNLLLSRFIHA-CSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHP 59
Query: 139 GALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSL 198
A F Y + + + Y+FP K S++ G+++H++ ++ G DL V +
Sbjct: 60 KASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAF 119
Query: 199 IHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWN 258
+ MYS F G + D AR++FD M
Sbjct: 120 VQMYSS----------FGSGCICD-------------------ARKMFDGM--------- 141
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
SM +G DV WN M++GYAK G++ +AR+ F+RM RNV+S
Sbjct: 142 SMSTG--------------------DVALWNAMLNGYAKHGDLCNARDLFERMPQRNVIS 181
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W L+ Y + + + LF RM + +P+E +++ LTACA +G +++G+WI YI
Sbjct: 182 WTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYID 241
Query: 379 KCRI-KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ + ++ L+ +L+ MYAK G + A VF+NM K +++W +MI G +HG G +AL
Sbjct: 242 RLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEAL 301
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
EMF ME+ PND TFI +LSAC+H G+V G WYF+ M Y IEPK+EHYGCM+DL
Sbjct: 302 EMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDL 361
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG +++++ L++++P E +WG+LL+AC+TH + ELG++ QHL+ELEP + G Y
Sbjct: 362 LGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNY 421
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVY 617
LLSNIYAS G+W+E +R++M + ++K G SL+ E I + +
Sbjct: 422 ALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISHSQFDRIQ 481
Query: 618 SMLGEIGAQMKMCR 631
+L +I Q+ + +
Sbjct: 482 EVLSKINRQLGLSQ 495
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 308/529 (58%), Gaps = 12/529 (2%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H + G + D F S ++ S SV + F+ + E D ++ +F
Sbjct: 144 VHALVQRIGFASDLFVMSGLINFYGAS-KSVEDARKVFEEMHERDVVSWTLMISAFAQCG 202
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
L ++M ++ + N T L C +R++ +G V+AR+ + G E D+ +R
Sbjct: 203 QWDNVLR-SLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIR 261
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER--- 252
N+LI MY CG + DA K F+ P+ + +WN++IDG+V+N + A +F+ M
Sbjct: 262 NALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVI 321
Query: 253 -DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARNC 307
D+ T S++S Y +GD++ L + + D++ N +I+ YAK G++ +A
Sbjct: 322 PDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEII 381
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+ M R++VSW ++ YV+ + LFD M D +E +L+S+L+AC+ +G +
Sbjct: 382 FENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGAL 441
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D G+ IHSYI++ ++ D+ L ++L+ MYAKCG +D A +F M K ++WN+MI G
Sbjct: 442 DKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGL 501
Query: 428 GMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
GQG++A+ +F ++ K R P P+ T VL ACTH GMV EG YF+LM + I P
Sbjct: 502 ASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTL-GIVP 560
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
EHYGC+VDLLGRAGL+ ++ + K+P++ P +WG+LL+AC H ELGKI+ QH+
Sbjct: 561 DNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHI 620
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
++L P D G +VL+SN++A EG+WD+VE +R +M + +EK+ G S +
Sbjct: 621 IDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQ 669
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 6/287 (2%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FDRM + WN ++ Y C + L LF M R P+ ++ +V + A
Sbjct: 72 ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAA 131
Query: 364 MGVID---IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
G +H+ +Q+ D+ + + L+ Y ++ AR VF+ M E++VVSW
Sbjct: 132 FASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSW 191
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
MI + GQ + L EM+ G PN T I +LSAC V +G W + +
Sbjct: 192 TLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDE 251
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA-CSTHSNSELG 539
Y IE V+ ++ + + G M D+ + +P+ + W L+ + E
Sbjct: 252 -YGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKS-WNTLIDGFVQNGKHKEAL 309
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
+ + L + D V + + YA G + L +K+ E+
Sbjct: 310 TMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIH 356
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 294/537 (54%), Gaps = 48/537 (8%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQE 118
+L KL+ S+VKE Q + SGL F S+++ L S L S+ + F+
Sbjct: 9 LLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTTM 68
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG-- 176
+ F+CNT+++++ P A+ + Y M K ++ +H+ +P K CA + EG
Sbjct: 69 DNPFVCNTMIRAYAKSVFPIKAI-YLYNFMHRKDIKSDHFMYPFGLKACARVLWCNEGDI 127
Query: 177 -----------KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
++H R+ + G + D F++NSL+++YS CG F D
Sbjct: 128 KCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCG--------FLD-------- 171
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
AR +FD M E+ I +WN MIS Y + D ++A+ L MP ++V
Sbjct: 172 ---------------LARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNV 216
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
VSWN +I Y ++G + A+ F M R+ VSWN ++A YV+ KDY L LF M
Sbjct: 217 VSWNMLIARYIRLGKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIA 276
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+ + + +L+SVL ACA G ++IG+ IH +++ K + LS +L+ MYAKCG ++LA
Sbjct: 277 NVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLA 336
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF--MEMEKRGPTPNDATFICVLSACT 463
VF + K++ WN+MI+ +HG E+AL +F MEM G PN TFI VL AC+
Sbjct: 337 WEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACS 396
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V EG +F+ M YKI P ++HYGCMVDLL R GL++++ ++ +P EA LW
Sbjct: 397 HKGLVDEGRKFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLW 456
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
LL AC H + +L + Q L ++EP G YVLLSNIYA +W++VE +I+
Sbjct: 457 RTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERASKIL 513
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 206/610 (33%), Positives = 332/610 (54%), Gaps = 31/610 (5%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
++P+ P WA + + + L +LSHP + F+QI + + SG+
Sbjct: 10 SIPRRRPWGWAWGYRQSYHNFSLSLLQ--NLSHP-----------RSFNQILSHAIASGV 56
Query: 86 SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
+D +S++L + + S F I +P+ F N + +++ + P ++ Y
Sbjct: 57 FRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALY- 115
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
M+ ++Y+FP + K CA + L +G+++H+ +K G LD+FV+N+LI +S C
Sbjct: 116 NLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSC 175
Query: 206 GEVLDARKVFEDGP--VWDLVTWNSMIDGYVKNREVGFARELF-----DFMPERDIFTWN 258
G V AR VF+ P V D+V+WNSMI GY+++ A ++F D D T
Sbjct: 176 GAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLV 235
Query: 259 SMIS-----GYVDVGDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
S +S G +D+G + +GLF F DV + +ID Y+K G + AR FDR+
Sbjct: 236 SALSVCGRLGLLDLG--KKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIP 293
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RN V W ++A Y + + E + LF M G + A++ VL+AC + G + G+W
Sbjct: 294 HRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRW 353
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IH Y ++ I+ D+ +L+ MY+KCG + A +F +T+ ++ SW+++I G M+G+
Sbjct: 354 IHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGE 413
Query: 433 GEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+KAL +F +ME PN+ TF+ VL AC H G V +G +YF+ M +IY + P +EHY
Sbjct: 414 SDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHY 473
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCMVDLLGRA L+ ++E+ + LP++ +W +LL AC H N EL + A+ + ELEP
Sbjct: 474 GCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEP 533
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPP 610
R G VLLSN+YAS +W +V+ +R+ M + ++K G S V E V + P
Sbjct: 534 RRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHP 593
Query: 611 HRKCIVYSML 620
I +M+
Sbjct: 594 EMGAIYETMI 603
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 311/555 (56%), Gaps = 20/555 (3%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGI 116
PIL +LE+C ++ E +Q+H ++ S + ++ SR++ C ++S + F+ I
Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P ++ N++++ + +P AL FY E M+ K +++TFP + K C+G+R ++ G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQE-MLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
VH +VK GFE++++V L+HMY CGEV +VFED P W++V W S+I G+V N
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYV-------DVGDMEAANGLFDLMPFR------ 283
A E F M + +++ + D+ + +G + F
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 284 ---DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
+V+ +ID YAK G++ +AR FD M R +VSWN ++ Y + D E L +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M+ P++ + +SV+ A G +GQ IH+Y+ K D + +L+ MYAK G
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTG 366
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG-PTPNDATFICVL 459
+ A+ F+++ +K+ ++W +I+G HG G +AL +F M+++G TP+ T++ VL
Sbjct: 367 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
AC+H G+V EG YF M+ ++ +EP VEHYGCMVD+L RAG ++E LV +P++
Sbjct: 427 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPN 486
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+WGALL+ C H N EL + + E E G YVLLSNIYA G+W +V+ +R
Sbjct: 487 VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRES 546
Query: 580 MKEKELEKAVGSSLV 594
MK K ++K +G S V
Sbjct: 547 MKSKRVDKVLGHSSV 561
>gi|345505224|gb|AEN99836.1| chlororespiratory reduction 4, partial [Lepidium virginicum]
Length = 594
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 318/574 (55%), Gaps = 46/574 (8%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVL------FFDG 115
SC T + ++IH QL+ +G +++ +R++ +S L+ + V F
Sbjct: 2 SCKTSDDVNKIHAQLITTGFIKNTNLTTRIVLAFASSRHQHLAEFARCVFEEHYVYSFPY 61
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ D F+ N +MKS DP AL + M+ V + ++ L+ K C+ + ++
Sbjct: 62 GETEDPFLWNAVMKSHSHGTDPRRAL-LLFCLMLENGVSVDKFSSSLVLKACSRLGFVKG 120
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G ++H + K G DLF++N LI +Y CG + AR++F+ P D V++N +G VK
Sbjct: 121 GMQIHGFLRKTGLWSDLFLQNCLIALYLKCGCLGFARQIFDRMPKRDSVSYNPXXEGXVK 180
Query: 236 NREVGFARELFDF----------------------------------MPERDIFTWNSMI 261
+ ARELF MPE+D+ +WNS+I
Sbjct: 181 CGLIESARELFXLXXXEXKNXXSXXCMXSGYAQTSDGLXIASKLFSEMPEKDLISWNSII 240
Query: 262 SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
GYV G E A L+D+MP RDV++W MIDGY K+G V A+ D + R+VV++N
Sbjct: 241 DGYVKHGRXEDAKDLYDVMPRRDVITWATMIDGYVKLGFVHQAKTLLDXIPHRDVVAYNS 300
Query: 322 LLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC 380
++A YV+ K + E L LF M + P+E +L+ VL+A A +G + ++ Y+ K
Sbjct: 301 MMAGYVQNKYHMEALELFGDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDMYLYVVKK 360
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF 440
+ L SL+ MY+KCG + A VF+ + K + WN++I G +HG+G A M
Sbjct: 361 QFFLGGKLWVSLIDMYSKCGSIQHAMLVFEGLENKTIDHWNAIIGGLAIHGRGGPAFNML 420
Query: 441 MEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGR 500
+++E+ P+D TF VL+AC+H+G V EG F+LM+R +KIEP+++HYGCMVD+L R
Sbjct: 421 LQIERSSIKPDDITFTGVLNACSHSGFVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 480
Query: 501 AGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLL 560
+G + ++ L+ K+P+E +W L+ACS H E+G++VA+HL+ +P YVLL
Sbjct: 481 SGSIELAKNLIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQADYNPSSYVLL 540
Query: 561 SNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
SN+YAS G W +V +R +MKE+++ K G S +
Sbjct: 541 SNMYASFGMWKDVRGVRTMMKERKIPKIPGCSSI 574
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/530 (34%), Positives = 298/530 (56%), Gaps = 36/530 (6%)
Query: 59 PIL-QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
PIL Q ++ CST K ++ + +Q+ + ++ + C+S + + L+V F +Q
Sbjct: 781 PILKQIIKQCSTPKLLESALAAMIKTSQTQNCYLMNQFITA-CSSFNRLDLAVSFMTQMQ 839
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+P+ F+ N ++K F+ + P +L FY +M+ V + YT+ L + A G+
Sbjct: 840 KPNVFVYNALIKGFVTCSHPIRSLEFYV-RMLRDSVSPSSYTYSSLVQASAFASGF--GE 896
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+ A I K GF + ++ +LI YS G + +ARKVF
Sbjct: 897 SLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVF---------------------- 934
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
D MPERD TW +M+S Y V DM++AN L + MP ++ +WNC+IDGY +
Sbjct: 935 ---------DEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTR 985
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
+GN+ A + F++M +++++SW ++ Y R K Y E + +F +M+ P+E ++ +V
Sbjct: 986 LGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1045
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
++ACA++GV++IG+ +H Y + DV + ++L+ MY+KCG ++ A VF N+ +KN+
Sbjct: 1046 ISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1105
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
WNS+I G HG ++AL+MF +ME PN TF+ V +ACTHAG+V EG +
Sbjct: 1106 FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRS 1165
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M Y I VEHYGCMV L +AGL+ ++ EL+ + E +WGALL C H N E
Sbjct: 1166 MIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLE 1225
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+ +I LM LEP + G Y LL ++YA + +W +V +R M+E +EK
Sbjct: 1226 IAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1275
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 310/526 (58%), Gaps = 9/526 (1%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F +E D N+++++F+ N P AL Y E + + +TFP L K CA +
Sbjct: 35 FAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLE 94
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ GK +H ++VK DL++ +L++MY+ CG++ AR +FE + V W SMI G
Sbjct: 95 FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISG 154
Query: 233 YVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV--- 285
Y+KN A L+ M E D T +++S ++ D+ L + D+
Sbjct: 155 YMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKIC 214
Query: 286 -VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V + +++ YAK G++ +AR FD++ ++V +W+ L+ YV+ E L+LF +
Sbjct: 215 AVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAG 274
Query: 345 G-DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
G + +PNE ++++V++ACA +G ++ G+W+H YI + + V L+ SL+ M++KCG +D
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDID 334
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A+ +FD+M+ K+++SWNSM+ G+ +HG G +AL F M+ P++ TFI VL+AC+
Sbjct: 335 AAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACS 394
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HAG+V EG F ++ +Y + K EHYGCMVDLL RAGL+ ++ E + +P++ A+W
Sbjct: 395 HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIW 454
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
G++L AC ++N ELG+ A+ L++LEP + G Y+LLSNIYA W+EV+ +R +M EK
Sbjct: 455 GSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEK 514
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
++K G S V A + +C + ML ++ ++K+
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKL 560
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 282/513 (54%), Gaps = 40/513 (7%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+H TFP L K CA ++ G V ++ GF D+FV N+ +H +VC + +ARK+F
Sbjct: 119 DHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLF 178
Query: 216 EDGPVWDLVTWNSMIDGYVKN------------------------------------REV 239
+ V DLV+WN++I GYV+ R++
Sbjct: 179 DGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDL 238
Query: 240 GFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
R L ++ + N ++ Y+ GD+E A +F+ + + +VSW MI GY
Sbjct: 239 ELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGY 298
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
A+ G + AR FD M R+V WN L+ YV+CK E LRLF M +P++ +++
Sbjct: 299 AQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMV 358
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
++L+AC+ +G +++G W+H YI + R+ V+L T+L+ MY+KCG ++ A VF + EK
Sbjct: 359 NLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEK 418
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
N ++W +MI G HG + A++ F M + G P++ TFI VLSAC HAG+V EG +F
Sbjct: 419 NALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFF 478
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
LM Y +E K++HY CMVDLLGRAG + ++E LV+ +PME +WGAL AC H N
Sbjct: 479 SLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGN 538
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
LG+ A L+EL+P D G YVLL+N+YA + + +R +M+ +EK G S +
Sbjct: 539 ITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIE 598
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E IV++ +Y L EI Q++
Sbjct: 599 LNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIE 631
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 201/452 (44%), Gaps = 55/452 (12%)
Query: 56 LSHPILQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
L+ P L L++C+ ++E + + +L G D F + + L SS++ +
Sbjct: 121 LTFPFL--LKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVC-SSMAEARKL 177
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FDG D NT++ ++ P AL ++ + V + T + A +R
Sbjct: 178 FDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRD 237
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G+++H + G + + N ++ MY CG++ A+ VFE +V+W +MI G
Sbjct: 238 LELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVG 297
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF---------- 282
Y + + AR++FD MPERD+F WN++++GYV + A LF M
Sbjct: 298 YAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITM 357
Query: 283 ------------------------RDVVSWNCM-----IDGYAKIGNVTSARNCFDRMCM 313
R VS + M +D Y+K GN+ A F +
Sbjct: 358 VNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPE 417
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
+N ++W +++ ++ F RMI +P+E + + VL+AC + G++ GQ
Sbjct: 418 KNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEF 477
Query: 374 HSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHG 431
S + K ++ + + ++ + + G +D A ++ + M E + V W ++ MHG
Sbjct: 478 FSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHG 537
Query: 432 Q---GEKALEMFMEMEKRGPTPNDATFICVLS 460
GEKA +E++ P D+ +L+
Sbjct: 538 NITLGEKAAMKLVELD-----PGDSGIYVLLA 564
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Query: 319 WNILLALYVRCKD---YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+N L C D CL L+ ++R A+P+ + +L ACA + + G +
Sbjct: 86 YNAALRALSLCTDRGLVTRCLPLYCSLLR-SARPDHLTFPFLLKACARLQERNYGNAVLG 144
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ DV + + + A C M AR +FD +++VSWN++I GY G +
Sbjct: 145 NVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPRE 204
Query: 436 ALEMFMEMEKRGP-TPNDATFICVLSA 461
ALEMF M G TP++ T I V+S
Sbjct: 205 ALEMFWRMVGDGAVTPDEVTMIGVVSG 231
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 288/482 (59%), Gaps = 11/482 (2%)
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+CN I++S + + F E M+ +E + +T PL+ K A I+ +REG+++HAR
Sbjct: 77 LCNAIIRSISRNSINLSPMEFLNE-MLVVGLEPDGFTIPLVLKALALIQGIREGQQIHAR 135
Query: 183 IVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK----NR 237
+K G +++V N+L+ +YSVCG + D +KVF++ P DLV+W ++I + K +R
Sbjct: 136 SIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSR 195
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF-----RDVVSWNCMI 292
V E+ D D T ++S ++GD+ + + DV N ++
Sbjct: 196 AVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALL 255
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
D Y K ++ SA FD M ++NVV+WN +++ Y E L F M KP+E
Sbjct: 256 DMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEV 315
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+ VL +CAN+GV++IG+W+H+Y+++ I D + +LL MYAKCG +D A VF++M
Sbjct: 316 TLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESM 375
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++V S+ +MI G +HG+ A ++F EM + G PN+ TF+ +L AC+H G+V EG
Sbjct: 376 KRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGK 435
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M YK+ P+ EHYGCM+DLLGRAGL++++EE++ K+ + GALL AC
Sbjct: 436 KYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRI 495
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N ++G+ V Q L EL+P + G Y+L++N+Y+S +W + +R+ MK K++ K G S
Sbjct: 496 HGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCS 555
Query: 593 LV 594
L+
Sbjct: 556 LI 557
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/471 (38%), Positives = 280/471 (59%), Gaps = 22/471 (4%)
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
RE +K+ ++ E + N L+ Y G + +ARKVF+ P ++V+W +MI GY
Sbjct: 11 REARKLFDKMP----ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGY 66
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
V+ + A LF MPER++ +W M+ G ++ G ++ A LFD+MP +DVV+ MID
Sbjct: 67 VQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMID 126
Query: 294 GYAKIGNVTSARNCFDRMCMRNVV-------------SWNILLALYVRCKDYCECLRLFD 340
G G + AR FD M RNVV +W+ ++ +Y R E L LF
Sbjct: 127 GLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFS 186
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M R +P+ S++SVL+ C ++ +D G+ +HS + + + D+ +S+ L+TMY KCG
Sbjct: 187 LMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCG 246
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ A+ VFD + K++V WNS+I GY HG GEKALE+F +M P++ TFI VLS
Sbjct: 247 DLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLS 306
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC++ G V EG F+ M+ Y+++PK EHY CMVDLLGRAG + ++ L+ +P+EA
Sbjct: 307 ACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADA 366
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+WGALL AC TH N +L +I A+ L++LEP + GPY+LLSN+Y+S+ +W +V LR+ M
Sbjct: 367 IVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTM 426
Query: 581 KEKELEKAVGSSLVHPGE---FASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ K L K+ G S + + S + P H ++ LG++GA ++
Sbjct: 427 RAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHE--MILKKLGKLGALLR 475
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
VC + SL G++VH+++V+ F++D++V + LI MY CG+++ A++VF+ D+V
Sbjct: 206 VCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVM 265
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP 281
WNS+I GY ++ A E+F M I T+ ++S G ++ +F+ M
Sbjct: 266 WNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMK 325
Query: 282 FRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ V + CM+D + G + A N + M + + + W LL
Sbjct: 326 SKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLG 374
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 316/589 (53%), Gaps = 45/589 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQ 117
+ + L C +V +Q+H L+V G+ S++L C + V + FD I
Sbjct: 15 VRELLRRCGSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFDRIP 71
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+PD F+ N++++++ + P AL M+ + + N +T P L K CA +++
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLL-RGMIRRGILPNEFTLPFLLKACARVQAWEHVM 130
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
H +VK GF +FV N+L+H Y+ G + D+R+ F++ ++V+WNSMI+GY +
Sbjct: 131 VTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAG 190
Query: 238 EVGFARELFDFMPER---------------------------------------DIFTWN 258
A LF+ M + D+ N
Sbjct: 191 NTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILAN 250
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
+++ Y GD+ A+ FD+MPF++ VSW M+ AK ++ +AR+ F+++ ++++S
Sbjct: 251 ALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIIS 310
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
WN +++ YV+ + E L L++RM P+E +L +VL+AC +G + G+ IH I+
Sbjct: 311 WNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIR 370
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
P V L SLL MYA+CG +D A ++F M KNV+SWN++I MHG+ + AL
Sbjct: 371 DNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALM 430
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
F M P++ TF+ +LSAC H G++ G +YF M+ +Y ++P VEHY CMVDLL
Sbjct: 431 FFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLL 490
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
GR G + + +L+ +PM +WGALL AC H + ++GK V + L+ELE G +V
Sbjct: 491 GRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFV 550
Query: 559 LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
L+SN+ +W++++ LR++M+E ++K +G S + ES E
Sbjct: 551 LISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHESGAEG 599
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 17/319 (5%)
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMS 356
G V AR FDR+ + +N L+ Y C +C E L L MIR PNE +L
Sbjct: 58 GGVWYARQLFDRIPDPDRFVYNSLIRAY--CNSHCPQEALPLLRGMIRRGILPNEFTLPF 115
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L ACA + + H + K V + +LL YA G + +R FD M ++N
Sbjct: 116 LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRN 175
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG-WWYF 475
VVSWNSMI GY G +A +F M ++G ++ T + +L AC+ G + G +
Sbjct: 176 VVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHS 235
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
L+ R +I+ + + +VD+ G+ G + + +P + + W ++L A + ++
Sbjct: 236 HLLVRGCRIDLILAN--ALVDMYGKCGDLLMAHTCFDMMPFKNAVS-WTSMLCALAKRAS 292
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE------KAV 589
+ + + + E + + + + Y G++ E +L MK L AV
Sbjct: 293 IDAARDWFEQIPE---KSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAV 349
Query: 590 GSSLVHPGEFASESIVENC 608
S+ G+ AS ++ +C
Sbjct: 350 LSACGQLGDLASGKMIHDC 368
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 326/601 (54%), Gaps = 50/601 (8%)
Query: 40 KPKFTDTDNQRLPIVDLSH-PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
+ KF+ N P LS + L+SC ++ QIH Q+ GL QD + ++++
Sbjct: 22 RSKFSTFTN---PTTGLSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMA- 77
Query: 99 LCTSLSSVSLSVL--FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
CT + +L+ F I+ P + N I+K+F + L + K+ + +
Sbjct: 78 FCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLF-SKLREDGLWPD 136
Query: 157 HYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
++T+P + K + + + +K+ + K G E D +VRNSLI MY+ + +F+
Sbjct: 137 NFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFD 196
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELF-------DFMPE------------------ 251
+ P D+++WN MI GYVK R A +F MP+
Sbjct: 197 EMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLE 256
Query: 252 ---------RDIFTW-----NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
RD + N+++ Y G + A +F+ MP ++V+ W M+ GYA
Sbjct: 257 LGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYAN 316
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G + AR F+ +R+VV W ++ YV+ + E + LF M KP++ ++S+
Sbjct: 317 CGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSL 376
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
LT CA G I+ G+WIH +I + RI D ++ T+L+ MYAKCG ++ A +F + K+
Sbjct: 377 LTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDT 436
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
SW S+I G M+G+ KALE+F +M++ G P+D TFI VLSAC+H G+V EG +F+
Sbjct: 437 ASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNS 496
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP---ALWGALLSACSTHS 534
M+ Y+I+PKVEHYGC+VDLLGRAGL+ ++EEL+ K+P E L+G+LLSAC +
Sbjct: 497 MRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYG 556
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N E+G+ VA+ L++ E D + LL+NIYA +W++V +RR MK+ ++K G S +
Sbjct: 557 NVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSI 616
Query: 595 H 595
Sbjct: 617 E 617
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 154/339 (45%), Gaps = 24/339 (7%)
Query: 276 LFDLMPFRDVVSWNCMI----DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+F + +D+VS N ++ D + GN+ A F + ++ +N+++ + + +
Sbjct: 60 IFRVGLHQDIVSLNKLMAFCTDPFN--GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGN 117
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
Y L LF ++ P+ + V A +G + + + + K ++ D + S
Sbjct: 118 YKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNS 177
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTP 450
L+ MYA+ + D+ + +FD M +++V+SWN MI GY + E A+ +F M E+ G P
Sbjct: 178 LIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMP 237
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
++AT + LSACT + G ++ K P + + ++D+ + G + + +
Sbjct: 238 DEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGN--ALLDMYCKCGCLSIARAV 295
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP-RDPGPYVLLSNIYASEGK 569
++P W ++S + E A+ L E P RD + + N Y +
Sbjct: 296 FEEMP-SKNVICWTTMVSGYANCGELE----EARELFEGSPIRDVVIWTAMINGYVQFNR 350
Query: 570 WDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+DE L R M+ ++ V P +F S++ C
Sbjct: 351 FDEAVALFREMQIRK---------VKPDKFIVVSLLTGC 380
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 310/545 (56%), Gaps = 17/545 (3%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGI 116
PIL +LE+C ++ E +Q+H ++ S + ++ SR++ C ++S + F+ I
Sbjct: 7 PILSQLENCRSMVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 66
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P ++ N++++ + +P AL FY E M+ K +++TFP + K C+G+R ++ G
Sbjct: 67 DCPSVYIWNSMIRGYSNSPNPDKALIFYQE-MLRKGYSPDYFTFPYVLKACSGLRDIQFG 125
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
VH +VK GFE++++V L+HMY CGEV +VFED P ++V W S+I G+V N
Sbjct: 126 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWGSLISGFVNN 185
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF------RDVVSWNC 290
A E F M + +++ VD+ + A FD P+ +V+
Sbjct: 186 NRFSDAIEAFREMQSIGVKPNETIM---VDL--LVACGRCFD--PYCQSKFEFNVILATS 238
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+ID YAK G++ +AR FD M RN+VSWN ++ Y + D E + +F M+ P+
Sbjct: 239 LIDMYAKCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGIAPD 298
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + SV+ A G +GQ IH+Y+ K D + +L+ MYAK G + A+ +F+
Sbjct: 299 KVTFFSVIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKTGNAESAKKMFE 358
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG-PTPNDATFICVLSACTHAGMVL 469
++ +K+ ++W +I+G HG G KAL +F M++ G TP+ T++ VL AC+H G+V
Sbjct: 359 DLEKKDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHIGLVE 418
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG YF M+ +Y +EP VEHYGCMVD+L RAG ++E LV +P++ +WGALL+
Sbjct: 419 EGQRYFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPTANIWGALLNG 478
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H N +L + + E E G YVLLSNIYA G+W +V+ +R MK K ++K +
Sbjct: 479 CEIHENLDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKLL 538
Query: 590 GSSLV 594
S V
Sbjct: 539 AHSSV 543
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 304/549 (55%), Gaps = 41/549 (7%)
Query: 85 LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY 144
L D + +LK S +++ + F I P N +++ + N P A+
Sbjct: 725 LPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIR-N 783
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y M ++ + N+ T+P L K CA I ++ VHAR++K GF+ DLFV N+LIH Y+
Sbjct: 784 YNLMYSQALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHGYAG 842
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR--------------------------- 237
E+ ARKVF++ DLV+WNS+I GY + R
Sbjct: 843 FCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKV 902
Query: 238 --------EVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
E G + +++ E D++ N++I Y ++ A +FD M R++
Sbjct: 903 VLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNM 962
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
VSWN MI GY K GN+ +AR FD M R+V+SW +++ Y + + + +RLF M+
Sbjct: 963 VSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVT 1022
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
KP+E ++ SVL+ACA++G +D+G+ +H YI+K + D+ + +L+ MY KCG ++
Sbjct: 1023 KVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKG 1082
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+VF+ M +++ VSW S+I G ++G + AL +F M + G P TF+ VL AC HA
Sbjct: 1083 LSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHA 1142
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V +G YF+ M+R+Y + P+++HYGC+VDLL R+G + + E + ++PM+ +W
Sbjct: 1143 GVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRI 1202
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LLSA H N L +I + L+E +P + G Y+L SN YA +W++V +RR+M+E +
Sbjct: 1203 LLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNV 1262
Query: 586 EKAVGSSLV 594
K SS V
Sbjct: 1263 HKPSASSSV 1271
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 148/340 (43%), Gaps = 23/340 (6%)
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
+N + +L+P + +N + N+ A F ++ + WNI++ + +
Sbjct: 718 SNMIKELLPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQP 777
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
E +R ++ M N + +L ACA + + +H+ + K D+ +S +L
Sbjct: 778 IEAIRNYNLMYSQALFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFDSDLFVSNAL 836
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ YA + AR VFD M+E+++VSWNS+I GYG + + L +F EM +
Sbjct: 837 IHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDA 896
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIY---KIEPKVEHYGCMVDLLGRAGLMRDSEE 509
T + V+ ACT VL W D M K+E V ++D+ GR ++ +
Sbjct: 897 VTMVKVVLACT----VLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARR 952
Query: 510 LVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP-RDPGPYVLLSNIYASEG 568
+ ++ + W A++ N + A+ L + P RD + + + Y+ G
Sbjct: 953 VFDRM-RDRNMVSWNAMIMGYGKAGN----LVAARKLFDDMPHRDVISWTSMISSYSQAG 1007
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
++ + R+ +E + K V P E S++ C
Sbjct: 1008 QFGKAV---RLFQEMMVTK------VKPDEITVASVLSAC 1038
>gi|357163369|ref|XP_003579710.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 548
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 302/540 (55%), Gaps = 6/540 (1%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P+ L C T + Q+H +++ GL +R C +L+S S++ F +
Sbjct: 9 SPPVATLLGRCRTARCLAQLHARIVRLGLHNHHSLLAR-FAAACDALASPSVADSFLSAL 67
Query: 117 QEPDAFMC--NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ NT++ S + AL+ + M+ + + ++FP L + CA +
Sbjct: 68 PSHAVPLSIRNTVLASLSRHSSLRAALAQF--NMIRRTAGPDAFSFPPLLRACAHVPCTS 125
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G +HA ++ G + DLFVR +LI Y C AR +F+ + V+W ++I YV
Sbjct: 126 TGTALHAAAIRLGLDADLFVRTALIQFYGRCRAAGAARALFDSMTIPSDVSWTAIIIVYV 185
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
+ E+ ARELFD +P R++ WN+M+ GYV GD+E+A LF+ MP + + +I G
Sbjct: 186 NSGEIVAARELFDRIPHRNLVHWNAMVDGYVKCGDLESAGRLFEEMPRKTAAAHTSLIGG 245
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK GN+ A+ FD++ R+V +W+ +++ Y + E R+F+ + D P+E +
Sbjct: 246 YAKAGNMEGAKLLFDKLQDRDVFAWSAMISGYAQNGYPGEAFRIFNEFHKQDICPDEPVI 305
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
++++ AC+ +G I + +WI YI I + + L+ M AKCG M+ A +F++M
Sbjct: 306 VALMAACSQLGNIMLARWIEGYIGSYSIDINNAHVLAGLINMNAKCGNMERATVLFESMP 365
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
++V S+ SM+ G+ +HG KA+E+F M G +P++A F VL+AC HAG+V E
Sbjct: 366 VRDVFSYCSMMQGHCLHGSANKAVELFSRMLLEGLSPDNAVFTVVLTACNHAGLVEEAKK 425
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
YF +M+ +Y I P +HY C+V LLGR G++RD+ E++ +P E WGALL C
Sbjct: 426 YFGMMKNVYSIVPSGDHYACLVSLLGRFGILRDAYEIIKSMPGEPHAGSWGALLGGCILQ 485
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
++ELGKI A+ L E+EP + G YV LSNIYA+ +W +V +R M K L K G +L
Sbjct: 486 CDTELGKIAAKKLFEIEPDNAGNYVTLSNIYANIDRWTDVSKIRAEMSRKGLTKIAGRTL 545
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 302/534 (56%), Gaps = 31/534 (5%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH 155
VSL+ +FD E DA N ++ +++ A + + +MA +V+
Sbjct: 216 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQR 275
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ + E +K+ ++ + D+ N+++ Y+ G++ +AR++F
Sbjct: 276 SQ---------------IEEAQKMFNKMP----QRDVVSWNTMVSGYARRGDMAEARRLF 316
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
+ P+ D+ TW +++ GY +N + A+ +FD MP+++ +WN+M++ YV ME A
Sbjct: 317 DVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKE 376
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
LFD MP R+V SWN M+ GYA+ G + AR F M ++ VSW +LA Y + E
Sbjct: 377 LFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEET 436
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L+LF M R N ++ VL+ CA++ ++ G +HS + K + +LL M
Sbjct: 437 LQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAM 496
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG M+ A + F+ M E++VVSWN+MI GY HG G++ALE+F M K P+D T
Sbjct: 497 YFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITL 556
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL+AC+H+G+V +G YF M R + + K EHY CM+DLLGRAG + ++ L+ +P
Sbjct: 557 VGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMP 616
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
E +WGALL A H NSELG+ A+ + ELEP + G YVLLSNIYAS GKW +V+
Sbjct: 617 FEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDK 676
Query: 576 LRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+R IM E+ ++K G S + + + S+ ++ P R+ I Y+ L ++ +MK
Sbjct: 677 MRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDI-YAFLEDLDIRMK 729
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 173/352 (49%), Gaps = 48/352 (13%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FF I PD+F NT++ + L ++ + +++M K + Y + G+
Sbjct: 160 FFRSIPRPDSFSYNTLLHA-LGVSSSLADVRALFDEMPVK--DSVSYNVMISSHANHGLV 216
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SL E D N ++ Y G + +AR++F+ WD ++WN+++
Sbjct: 217 SLAR------HYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMA 270
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
GYV+ ++ A+++F+ MP+RD+ +WN+M+SGY GDM A LFD+ P RDV +W +
Sbjct: 271 GYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAI 330
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+ GYA+ G + A+ FD M +N VSWN ++A YV+ + E LFD M
Sbjct: 331 VSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAM--------- 381
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
C N + W ++LT YA+ G++D AR +F
Sbjct: 382 --------PCRN-----VASW-----------------NTMLTGYAQAGMLDEARAIFGM 411
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
M +K+ VSW +M+ Y G E+ L++F EM + G N + F CVLS C
Sbjct: 412 MPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCA 463
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 146/313 (46%), Gaps = 27/313 (8%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
++++ RN I + G V DA ++F P T+N+M+ GY N + A F
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+P D F++N+++ + LFD MP +D VS+N MI +A G V+ AR+ F
Sbjct: 164 IPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF 223
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA------ 362
D ++ VSWN +LA YVR E LFD DA A + +
Sbjct: 224 DLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQK 283
Query: 363 ---NMGVIDIGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLA 405
M D+ W + Y ++ + DV T++++ YA+ G+++ A
Sbjct: 284 MFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEA 343
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+ VFD M +KN VSWN+M+ Y E+A E+F M P N A++ +L+ A
Sbjct: 344 KRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAM----PCRNVASWNTMLTGYAQA 399
Query: 466 GMVLEGWWYFDLM 478
GM+ E F +M
Sbjct: 400 GMLDEARAIFGMM 412
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 316/589 (53%), Gaps = 45/589 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQ 117
+ + L C +V +Q+H L+V G+ S++L C + V + FD I
Sbjct: 15 VRELLRRCGSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFDRIP 71
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+PD F+ N++++++ + P AL M+ + + N +T P L K CA +++
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLL-RGMIRRGILPNEFTLPFLLKACARVQAWEHVM 130
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
H +VK GF +FV N+L+H Y+ G + D+R+ F++ ++V+WNSMI+GY +
Sbjct: 131 VTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAG 190
Query: 238 EVGFARELFDFMPER---------------------------------------DIFTWN 258
A LF+ M + D+ N
Sbjct: 191 NTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILAN 250
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
+++ Y GD+ A+ FD+MPF++ VSW M+ AK ++ +AR+ F+++ ++++S
Sbjct: 251 ALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIIS 310
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
WN +++ YV+ + E L L++RM P+E +L +VL+AC +G + G+ IH I+
Sbjct: 311 WNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIR 370
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
P V L SLL MYA+CG +D A ++F M KNV+SWN++I MHG+ + AL
Sbjct: 371 DNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALM 430
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
F M P++ TF+ +LSAC H G++ G +YF M+ +Y ++P VEHY CMVDLL
Sbjct: 431 FFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLL 490
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
GR G + + +L+ +PM +WGALL AC H + ++GK V + L+ELE G +V
Sbjct: 491 GRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFV 550
Query: 559 LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
L+SN+ +W++++ LR++M+E ++K +G S + ES E
Sbjct: 551 LISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHESGAEG 599
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 17/319 (5%)
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMS 356
G V AR FDR+ + +N L+ Y C +C E L L MIR PNE +L
Sbjct: 58 GGVWYARQLFDRIPDPDRFVYNSLIRAY--CNSHCPQEALPLLRGMIRRGILPNEFTLPF 115
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L ACA + + H + K V + +LL YA G + +R FD M ++N
Sbjct: 116 LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRN 175
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG-WWYF 475
VVSWNSMI GY G +A +F M ++G ++ T + +L AC+ G + G +
Sbjct: 176 VVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHS 235
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
L+ R +I+ + + +VD+ G+ G + + +P + + W ++L A + ++
Sbjct: 236 HLLVRGCRIDLILAN--ALVDMYGKCGDLLMAHTCFDMMPFKNAVS-WTSMLCALAKRAS 292
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE------KAV 589
+ + + + E + + + + Y G++ E +L MK L AV
Sbjct: 293 IDAARDWFEQIPE---KSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAV 349
Query: 590 GSSLVHPGEFASESIVENC 608
S+ G+ AS ++ +C
Sbjct: 350 LSACGQLGDLASGKMIHDC 368
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 319/586 (54%), Gaps = 60/586 (10%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS---------LSVLFFDGI 116
+ + + QIH ++V+G + + +++ L T++S V +V F I
Sbjct: 10 TITNLGTLRQIHALMIVNGFTSNVGFLRKLV--LTTAMSMVGPAATTAVTQYAVQMFAQI 67
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+PD FM NT ++ +DP A++ Y +M + V+ +++TFPL+ K C + + G
Sbjct: 68 PQPDTFMWNTYIRGSSQSHDPVHAVALY-AQMTHRSVKPDNFTFPLVLKACTKLFWVNTG 126
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
VH R+ + GF ++ VRN+L+ ++ CG++ KV
Sbjct: 127 SVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDL----KV---------------------- 160
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
A ++FD + D+ W+++I+GY GD+ A LFD MP RD+VSWN MI Y
Sbjct: 161 -----ANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYT 215
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G + AR FD M++VVSWN ++ YV E L LFD M P+E +++S
Sbjct: 216 KHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLS 275
Query: 357 VLTACANMGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+L+ACA++G D G+ +H+ I + + K LL +L+ MYAKCG + VF + +K
Sbjct: 276 LLSACADLG--DXGEKVHAKIMELNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDK 333
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
++VSWNS+I G HG E++L +F EM++ P++ TF+ VL+AC+H G V EG YF
Sbjct: 334 DMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYF 393
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
LM+ YKIEP + H GC+VD+L RAGL++++ + ++ + +E +W +LL AC H +
Sbjct: 394 YLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGD 453
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
EL K + L+ + G YVLLSN+YAS G+WD EN+R++M + + K GSS
Sbjct: 454 VELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWDGAENVRKLMDDNGVTKTRGSS--- 510
Query: 596 PGEFASESIVENCPPHRK-----CIVYS---MLGEIGAQMKMCRRD 633
F +E P + + CIVY + + ++ RRD
Sbjct: 511 ---FVEAYRIEPNPVNGRTLLGACIVYGDVELAKRVNEELLRLRRD 553
>gi|22293716|dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 631
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 290/513 (56%), Gaps = 37/513 (7%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD-- 210
V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y CG
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGG 166
Query: 211 ---ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
AR+VF++ D+V+WNS++ Y+ + + A F+ MPER++ +WN++++G+ +
Sbjct: 167 VGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARM 226
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
GDM A +FD MP R+ VSWN MI GYA G+V +AR+ FDRM ++VVSW +++ Y
Sbjct: 227 GDMVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYA 286
Query: 328 RCKD-------------------------------YCECLRLFD-RMIRGDAKPNEASLM 355
+ D Y E LR F M+ G +P+EA+L+
Sbjct: 287 KIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLV 346
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
SV++ACA +G ++ WI S+I K I V L +L+ M+AKCG + A ++F M +
Sbjct: 347 SVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETR 406
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+++W +MI G+ +G AL ++ M + G +D FI L+AC H G++ EGW F
Sbjct: 407 CIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIF 466
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ M Y I+P++EHYGCMVDLLGRAG ++++ + +P+E +W LL +C H N
Sbjct: 467 NEMVERYNIQPRMEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLCSCVAHGN 526
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+EL + V++ + ELEP + VL+SN A EG+WD V + R M+ +EK GSS +
Sbjct: 527 AELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQ 586
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G E + ++ R+ +Y + + A M+
Sbjct: 587 VGSEVHEFLAKDTRHKRRKEIYETVDGLMALMR 619
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 294/541 (54%), Gaps = 45/541 (8%)
Query: 141 LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
L Y + + +H TFP L K CA ++ G V + K GF D+FV N+ +H
Sbjct: 105 LPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMH 164
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---RE------------------- 238
+SV G + AR++F++ PV D+V+WN++I GYV++ RE
Sbjct: 165 FWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDE 224
Query: 239 ---------------VGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDL 279
+ + L +F+ + + N+++ YV G +E AN +F+
Sbjct: 225 VTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFER 284
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ R VSW MI G+A++G + AR FD M R+V WN L+A YV+ K E + LF
Sbjct: 285 ISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALF 344
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
M + PNE +++++L+AC+ +G +++G W+H YI + ++ V L TSL+ MYAKC
Sbjct: 345 HEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKC 404
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + A VF+ + +N ++W SMI G HG ++A+E F M G P++ TFI VL
Sbjct: 405 GNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVL 464
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC HAG+V G +F LM Y +E K++HY CM+DLLGRAG + ++E+LV+ +PM+
Sbjct: 465 SACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPD 524
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+WGAL AC H N LG+ A L+EL+P D G YVLL+N+YA + + +R +
Sbjct: 525 AVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVM 584
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQIS 639
M+ +EK G S + E IV++ +Y L EI QM R +A+ I
Sbjct: 585 MRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQM----RHIANLID 640
Query: 640 I 640
I
Sbjct: 641 I 641
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 14/230 (6%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FD + E D F N +M ++ A++ ++E +K V+ N T L C+ +
Sbjct: 311 MLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSK-VDPNEITMVNLLSACSQL 369
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+L G VH I + L + + SL+ MY+ CG + A VF + PV + +TW SMI
Sbjct: 370 GALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMI 429
Query: 231 DGYVKNREVGFARELF----DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF---- 282
G + A E F D + D T+ ++S G +EA F LM
Sbjct: 430 CGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHL 489
Query: 283 -RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLALYVRCK 330
R + ++CMID + G++ A + M M + V W AL+ C+
Sbjct: 490 ERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWG---ALFFACR 536
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 334 ECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
CL L+ ++ G A+P+ + ++ ACA + G + ++QK DV + +
Sbjct: 103 HCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAA 162
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT--P 450
+ ++ G M AR +FD ++VVSWN++I GY G +ALE+F + + G P
Sbjct: 163 MHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRP 222
Query: 451 NDATFICVLSACTHAG 466
++ T I +S C G
Sbjct: 223 DEVTVIGAVSGCAQMG 238
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 328/583 (56%), Gaps = 12/583 (2%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
D+ +LQ+ ++++ ++H +L SG+ + + + +L + S++ + FD
Sbjct: 97 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLS-MYAKCGSLTDARRVFD 155
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
GI++ + ++++F+ N A Y E M + + TF L L+
Sbjct: 156 GIRDRNIVSWTAMIEAFVAGNQNLEAYKCY-ETMKLAGCKPDKVTFVSLLNAFTNPELLQ 214
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+KVH I K G EL+ V SL+ MY+ CG++ A+ +F+ P ++VTW +I GY
Sbjct: 215 VGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYA 274
Query: 235 KNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP----FRDVV 286
+ +V A EL + M + ++ T+ S++ G +E + + R++
Sbjct: 275 QQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIW 334
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N +I Y K G + AR F + R+VV+W ++ Y + + E + LF RM +
Sbjct: 335 VVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG 394
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KP++ + S LT+C++ + G+ IH + DV L ++L++MYAKCG MD AR
Sbjct: 395 IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDAR 454
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
VF+ M+E+NVV+W +MI G HG+ +ALE F +M+K+G P+ TF VLSACTH G
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+V EG +F M Y I+P VEHY C VDLLGRAG + ++E ++ +P + GP++WGAL
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
LSAC HS+ E G+ A+++++L+P D G YV LSNIYA+ G++++ E +R++M+++++
Sbjct: 575 LSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
Query: 587 KAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
K G S + G+ + + P K I Y+ LG++ Q+K
Sbjct: 635 KEPGQSWIEVDGKVHVFHVEDKSHPEAKEI-YAELGKLTEQIK 676
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
E L + + MI + +L CA + ++ G+ +H+ I K I+P+ L +LL
Sbjct: 79 EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
+MYAKCG + AR VFD + ++N+VSW +MI + Q +A + + M+ G P+
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198
Query: 454 TFICVLSACTHAGMVLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF+ +L+A T+ ++ G + ++ + ++EP+V +V + + G + ++ +
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFD 256
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
KLP E W L++ + ++ + + + + E
Sbjct: 257 KLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/645 (30%), Positives = 330/645 (51%), Gaps = 56/645 (8%)
Query: 31 PPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSF 90
P K + + K + + R+ + IL+ + S +++ +IHT + SG+ D
Sbjct: 160 PAKAFDTFERMKDANIEPNRITFL----SILKACNNYSMLEKAREIHTVVKASGMETD-V 214
Query: 91 AASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKS---FLMLNDPFGALSFYYEK 147
A + L + + +SL+ F ++E + I+++ LN+ F YEK
Sbjct: 215 AVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFE----LYEK 270
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M+ + N TF L C +L G+++H+ I + G E D+ V N+LI MY C
Sbjct: 271 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNC 330
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKN------------------REVGFARELFDFM 249
+ DAR+ F+ D+++W++MI GY ++ R G FM
Sbjct: 331 IQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFM 390
Query: 250 P--------------------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
E D ++ + Y G + A +F M +
Sbjct: 391 SILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK 450
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+VV+W ++ Y K G++TSA F M RNVVSWN+++A Y + D + L M
Sbjct: 451 NVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK 510
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+P+ +++S+L AC + ++ G+ +H+ K ++ D +++TSL+ MY+KCG +
Sbjct: 511 VEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVT 570
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD ++ ++ V+WN+M+ GYG HG G +A+++F M K PN+ TF V+SAC
Sbjct: 571 EARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACG 630
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
AG+V EG F +MQ ++++P +HYGCMVDLLGRAG ++++EE + ++P E ++W
Sbjct: 631 RAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVW 690
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
ALL AC +H N +L + A H++ LEP + YV LSNIYA G+WD+ +R++M +K
Sbjct: 691 HALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDK 750
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
L+K G S + + E+C +++ L + +MK
Sbjct: 751 GLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMK 795
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 222/442 (50%), Gaps = 24/442 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N T+ + + CA +R +GK VH ++ + G +D+++ NSLI+ YS G+V +VF
Sbjct: 77 NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDME 271
+ D+VTW+SMI Y N A + F+ M + +I T+ S++ + +E
Sbjct: 137 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLE 196
Query: 272 AANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
A + ++ DV +I Y+K G ++ A F +M RNVVSW ++
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ + E L+++M++ PN + +S+L +C ++ G+ IHS+I + ++ DV+
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK-----ALEMFME 442
++ +L+TMY KC + AR FD M++++V+SW++MI GY G +K ++
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M + G PN TF+ +L AC+ G + +G + ++ E + ++ + G
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCG 435
Query: 503 LMRDSEELVSKLPMEAGPALWGALLS---ACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
+ ++E++ SK+ + A W +LL+ C +++E + E+ R+ + L
Sbjct: 436 SIYEAEQVFSKMENKNVVA-WASLLTMYIKCGDLTSAE------KVFSEMSTRNVVSWNL 488
Query: 560 LSNIYASEGKWDEVENLRRIMK 581
+ YA G +V L MK
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMK 510
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/567 (25%), Positives = 247/567 (43%), Gaps = 52/567 (9%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+E C+ ++ F +H QL GL+ D + + ++ + V+ F + D
Sbjct: 85 IEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLIN-FYSKFGDVASVEQVFRRMTLRD 143
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
++++ ++ N P A +E+M +E N TF + K C L + +++H
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFD-TFERMKDANIEPNRITFLSILKACNNYSMLEKAREIH 202
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ G E D+ V +LI MYS CGE+ A ++F+ ++V+W ++I ++R++
Sbjct: 203 TVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLN 262
Query: 241 FARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
A EL++ M + I T+ S+++ + + + R DVV N +I
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC-----KDYCECLRLFDRMIRGDA 347
Y K + AR FDRM R+V+SW+ ++A Y + + E +L +RM R
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST----------------- 390
PN+ + MS+L AC+ G ++ G+ IH+ I K + D L T
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQ 442
Query: 391 --------------SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
SLLTMY KCG + A VF M+ +NVVSWN MI GY G K
Sbjct: 443 VFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKV 502
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
E+ M+ G P+ T I +L AC + G ++ +E ++
Sbjct: 503 FELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKL-GLESDTVVATSLIG 561
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS-NSELGKIVAQHLMELEPRDPG 555
+ + G + ++ + K+ A W A+L+ H E + + L E P +
Sbjct: 562 MYSKCGEVTEARTVFDKISNRDTVA-WNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEI 620
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKE 582
+ + + G E + RIM+E
Sbjct: 621 TFTAVISACGRAGLVQEGREIFRIMQE 647
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/630 (30%), Positives = 329/630 (52%), Gaps = 49/630 (7%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P+P F V ++ IL+KL C ++ Q+H +L + ++ + L
Sbjct: 6 PRPSFA---------VSAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSF 56
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
+S++ LF P++ + N++++ +P + FY +++ +
Sbjct: 57 SSSSINLSYALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFY-QRIRHVGGRFDRI 115
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
+FP + K + + +L EG ++H K D FV L+ MY+ CG + AR VF++
Sbjct: 116 SFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEM 175
Query: 219 PVWDLVTWNSMIDGYV-----------------------------------KNREVGFAR 243
D+VTWN+MI+ Y + + + R
Sbjct: 176 SQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 235
Query: 244 ELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
++DF+ E D+ ++++ Y G M+ A F M R++ M+ GY+K G
Sbjct: 236 AIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAG 295
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR FD+ M+++V W +++ Y E LR+F+ M KP+ +++SV++
Sbjct: 296 RLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVIS 355
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
AC N+G +D +W+H Y ++ + + +L+ MYAKCG +D AR+VF+ M +NVVS
Sbjct: 356 ACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVS 415
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W+SMI + MHG+ +L +F +M++ PN+ TF+ VL C+H+G+V EG F M
Sbjct: 416 WSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT 475
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y I PK+EHYGCMVDL GRA L+R++ E++ +PM +WG+L+SAC H ELG
Sbjct: 476 DEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELG 535
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
++ A+ +++LEP G VL+SNIYA E +WD V +R IM++K++ K G S +
Sbjct: 536 ELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGK 595
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+ E ++ + + +Y+ L E+ +++K+
Sbjct: 596 SHEFLIGDKRHKQSNEIYTKLYEVVSKLKL 625
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/614 (33%), Positives = 324/614 (52%), Gaps = 49/614 (7%)
Query: 59 PILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL-----F 112
P LQKL C +++ +Q+H LLV G S A+ +L C +L+ VL
Sbjct: 12 PSLQKLLRQCRSIQRLNQLHAHLLVHG--SLSAASDLLLASYC-ALAKAGHGVLCHARRL 68
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FDGI PD M NTI++++ + P AL + M+ + + N +T P + K C ++
Sbjct: 69 FDGIPGPDRVMYNTIIRAYCNSSCPREALRLH-RGMLRRGILPNEFTLPFVVKACTIAQA 127
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
VH ++ G +FV N+L+H Y+ G + D+R+ F++ ++V+WNSMI G
Sbjct: 128 REHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGG 187
Query: 233 YVK---NREV----------GFARELFDFMP--------------------------ERD 253
Y + REV GF + F + D
Sbjct: 188 YAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVD 247
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+ ++++ Y GD+ A F++MP + VVSW M+ K G+V +AR FD M
Sbjct: 248 LILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPE 307
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RN+VSWN +++ YV+ E L L+++M P+E +L++VL+A +G + +G+ +
Sbjct: 308 RNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMV 367
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H YI+ PDV L SLL MYAKCG +D A ++F M +NVVSWN +I G MHG+
Sbjct: 368 HLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRA 427
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
+ F M P+ TF+ +LSAC+H G++ G YF+ M+ +Y ++ +VEHY C
Sbjct: 428 LDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYAC 487
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGR G + + L+ ++PM+ +WGALL AC H N ++G+ V + L+ELE
Sbjct: 488 MVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGIS 547
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
G +VL+SN+ +W++++ LR++MKE K +G S + E VE+ R
Sbjct: 548 GGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERS 607
Query: 614 CIVYSMLGEIGAQM 627
+Y+++ ++ +
Sbjct: 608 SEIYAVVDQLSYHL 621
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 306/519 (58%), Gaps = 9/519 (1%)
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D N+++++F+ N P AL Y E + + +TFP L K CA + + GK +
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H ++VK DL++ +L++MY+ CG++ AR +FE + V W SMI GY+KN
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161
Query: 240 GFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV----VSWNCM 291
A L+ M E D T +++S ++ D+ L + D+ V + +
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG-DAKPN 350
++ YAK G++ +AR FD++ ++V +W+ L+ YV+ E L+LF + G + +PN
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
E ++++V++ACA +G ++ G+W+H YI + + V L+ SL+ M++KCG +D A+ +FD
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+M+ K+++SWNSM+ G +HG G +AL F M+ P++ TFI VL+AC+HAG+V E
Sbjct: 342 SMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQE 401
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F ++ +Y + K EHYGCMVDLL RAGL+ ++ E + +P++ A+WG++L AC
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
++N ELG+ A+ L+ELEP + G Y+LLSNIYA W+EV+ +R +M EK ++K G
Sbjct: 462 RVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPG 521
Query: 591 SSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
S V A + +C + ML ++ ++K+
Sbjct: 522 CSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKL 560
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 191/369 (51%), Gaps = 21/369 (5%)
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-----DIFTWNSMISGYV 265
A VF V D++TWNSM+ +V + A + + M ER D FT+ S++ G
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 266 DVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ + + L M D+ +++ YA G++ SAR F+RM RN V W
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 322 LLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+++ Y+ K++C E L L+ +M P+E ++ ++++ACA + + +G +HS+I++
Sbjct: 151 MISGYM--KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
+K +L ++L+ MYAKCG + AR VFD +++K+V +W+++I GY + + +AL++
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 440 FMEME-KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
F E+ PN+ T + V+SAC G + G W D + R K V ++D+
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMF 327
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK-IVAQ-HLMELEPRDPGP 556
+ G + ++ + + + + W ++++ + H LG+ +AQ HLM+ P
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLIS-WNSMVNGLALHG---LGREALAQFHLMQTTDLQPDE 383
Query: 557 YVLLSNIYA 565
+ + A
Sbjct: 384 ITFIGVLTA 392
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + + D + + ++ ++ N AL + E + N T + CA +
Sbjct: 238 FDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGD 297
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G+ VH I + + + NSLI M+S CG++ A+++F+ DL++WNSM++G
Sbjct: 298 LETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357
Query: 233 YVKNREVGFAREL---FDFMPERDI----FTWNSMISGYVDVGDMEAANGLF-DLMPFRD 284
+ G RE F M D+ T+ +++ G ++ LF ++
Sbjct: 358 LALH---GLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYG 414
Query: 285 VV----SWNCMIDGYAKIGNVTSAR 305
V + CM+D + G + AR
Sbjct: 415 VRLKSEHYGCMVDLLCRAGLLAEAR 439
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 323/568 (56%), Gaps = 22/568 (3%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH QL+V+G + + FA + V+ + V + FD + E D NTI+ +
Sbjct: 196 EIHCQLIVNGFASNVFAMTGVVN-MYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYA-- 252
Query: 135 NDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+ FG + +M + + T + A + SLR G+ +H ++ GFE +
Sbjct: 253 QNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVN 312
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V +L+ MYS CG V AR +F+ +V+WNSMIDGYV+N + G A E+F M +
Sbjct: 313 VSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQ 372
Query: 254 IFTWNSMISGYV----DVGDMEAA---NGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSAR 305
+ N + G + D+GD+E + L D + DV N +I Y+K V A
Sbjct: 373 VEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAA 432
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
F+ + + +VSWN ++ Y + E + F +M + KP+ +++SV+ A A +
Sbjct: 433 EIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELS 492
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
V+ +WIH + + + +V ++T+L+ MYAKCG + AR +FD M E++V +WN+MI
Sbjct: 493 VLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMID 552
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GYG HG G+ ALE+F +M+K PN+ TF+CVLSAC+H+G+V EG+ YF M++ Y +E
Sbjct: 553 GYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLE 612
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P ++HYG MVDLLGRA + ++ + + K+P+E +++GA+L AC H N ELG+ A
Sbjct: 613 PAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANR 672
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASE--- 602
+ +L+P D G +VLL+NIYA+ WD+V +R M++K ++K G S+V E +E
Sbjct: 673 IFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVV---ELQNEVHT 729
Query: 603 --SIVENCPPHRKCIVYSMLGEIGAQMK 628
S + P +K +Y+ L +G ++K
Sbjct: 730 FYSGTTSHPQAKK--IYAFLETLGNRIK 755
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 258/505 (51%), Gaps = 15/505 (2%)
Query: 44 TDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL 103
T + +P HP LE C+++KE HQ ++ +GL + ++++ C
Sbjct: 64 TPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFC-KF 122
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLL 163
S+ + F I++ + +T++K + + A+SF+ +M V Y F L
Sbjct: 123 GSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFC-RMRYDGVRPVVYNFTYL 181
Query: 164 GKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
KVC LR+GK++H +++ GF ++F +++MY+ C V +A K+F+ P DL
Sbjct: 182 LKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDL 241
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDM---EAANGL 276
V WN++I GY +N A EL M E D T S++ DVG + + +G
Sbjct: 242 VCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGY 301
Query: 277 FDLMPFRDVVSWN-CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
F V+ + ++D Y+K G+V +AR FDRM + VVSWN ++ YV+ D
Sbjct: 302 SMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAA 361
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+ +F +M+ + ++M L ACA++G ++ G+++H + + + DV + SL++M
Sbjct: 362 MEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISM 421
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y+KC +D+A +F+N+ K +VSWN+MI+GY +G+ +A++ F +M+ + P+ T
Sbjct: 422 YSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTM 481
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ V+ A ++ + W L+ R ++ V +VD+ + G + + +L +
Sbjct: 482 VSVIPALAELSVLPQAKWIHGLVIRTC-LDKNVFVATALVDMYAKCGAVHTARKLFDMMD 540
Query: 516 MEAGPALWGALLSACSTHSNSELGK 540
E W A++ TH LGK
Sbjct: 541 -ERHVTTWNAMIDGYGTHG---LGK 561
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 323/564 (57%), Gaps = 18/564 (3%)
Query: 74 HQIHTQL-LVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFL 132
H +H+ L L++ + + K+ L+ ++ + FF+ D F+CN+++ +
Sbjct: 43 HSLHSNLNLLTAFVTTCASLAASAKR---PLAIINHARRFFNATHTRDTFLCNSMIAAHF 99
Query: 133 ---MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+ PF F + A + YTF L K CA + EG +H ++K G
Sbjct: 100 AARQFSQPFTL--FRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGTLLHGMVLKNGVC 157
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
DL+V +L+ MY G + ARKVF++ V V+W ++I GY + ++ AR LFD M
Sbjct: 158 FDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEM 217
Query: 250 PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+RDI +N+MI GYV +G + A LF+ M R+VVSW M+ GY G+V +A+ FD
Sbjct: 218 EDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFD 277
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
M +NV +WN ++ Y + + + L LF M +PNE +++ VL A A++G +D+
Sbjct: 278 LMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDL 337
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G+WIH + + ++ + T+L+ MYAKCG + A+ F+ MTE+ SWN++I G+ +
Sbjct: 338 GRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAV 397
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
+G ++ALE+F M + G PN+ T I VLSAC H G+V EG +F+ M+R + I P+VE
Sbjct: 398 NGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAMER-FGIAPQVE 456
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HYGCMVDLLGRAG + ++E L+ +P +A + + L AC ++ + V + ++++
Sbjct: 457 HYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLRAERVLKEVVKM 516
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG----EFASESIV 605
+ G YV+L N+YA+ +W +VE+++++MK++ K V S++ G EFA+ +
Sbjct: 517 DEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEIGGSFIEFAAGDYL 576
Query: 606 ENCPPHRKCIVYSMLGEIGAQMKM 629
+ H + I + LG++ MK+
Sbjct: 577 HS---HLEVIQLT-LGQLSKHMKV 596
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 305/574 (53%), Gaps = 72/574 (12%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCN 125
+C T+K+ QIHTQ++V+G SQ +F ++L TS + ++ +F + I+ P + N
Sbjct: 43 TCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVF-ERIENPSTTVWN 101
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
+++ P + Y +M+ E N +T+ L CA LREG++VH R+V
Sbjct: 102 QMIRGHSQSETPHKLVELY-NRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVA 160
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
G+ ++FVR SL+++Y++ G RK AR +
Sbjct: 161 NGYCTNVFVRTSLVNLYAIAGGYDGVRK----------------------------ARRV 192
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
FD + +R+I +WNS+++GYV GD++ A +FD MP R+VVSW MI G A+IG
Sbjct: 193 FDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIG------ 246
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
RCK + L LF M R K ++ +L++ L+ACA +G
Sbjct: 247 ----------------------RCK---QALHLFHEMRRAGVKLDQVALVAALSACAELG 281
Query: 366 VIDIGQWIHSYIQKCRIKPD-----VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
+ +G WIHSYI + R+ V L+ SL+ MYA CGV+D A VF M +++ +SW
Sbjct: 282 DLKLGTWIHSYIDE-RLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISW 340
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGP---TPNDATFICVLSACTHAGMVLEGWWYFDL 477
SMI G+ G E+AL +F M++ G P+ TFI VL AC+HAG V +G +F+
Sbjct: 341 TSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFEC 400
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M + + I P++EHYGCMVDLL RAG + ++ L +PM+ A+WGALL C H N+E
Sbjct: 401 MNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNAE 460
Query: 538 LGKIVAQHL-MELEPRDPGPY-VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
L VAQ L +EL+P Y VLLSN+YA+ +W +V +R+ M E + K G S V
Sbjct: 461 LASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQ 520
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+ + + VY ML +I Q K+
Sbjct: 521 INGVVHDFVAGDWTHKHASSVYEMLSKITRQAKL 554
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 259/427 (60%)
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
AG + R KV ++ E D+F N ++ Y +V AR F+ PV D +WN
Sbjct: 44 AGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWN 103
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
+MI G+ +N + ARELF MP R+ +WN+MISGYV+ GD++ A LF++ P R VV+
Sbjct: 104 TMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVA 163
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
W MI G+ K G + A F+ M M+N+V+WN ++A Y+ L+LF RM+
Sbjct: 164 WTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGF 223
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+PN +SL SVL C+N+ + +G+ +H I K + ++ TSLL+MY KCG ++ A
Sbjct: 224 RPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWK 283
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F M +K+VV+WN+MI GY HG GEKAL +F +M G P+ TF+ VLSAC HAG
Sbjct: 284 LFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGF 343
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V G YF+ M R Y +E K +HY C+VDLLGR G + ++ +L+ K+P + A++G LL
Sbjct: 344 VDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLL 403
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H N EL + A++L+ L+P YV L+N+YA+ +WD V +RR MK+ ++ K
Sbjct: 404 GACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIK 463
Query: 588 AVGSSLV 594
G S +
Sbjct: 464 TPGYSWI 470
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 149/313 (47%), Gaps = 34/313 (10%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA-KIGNVTSARNCFDRM 311
++ + N +I+ ++ GD+ +A +F+ M + V+WN M+ GY+ + G + AR FDR+
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
++ S+NI+LA Y+ D FD+M D AS ++++ + G++D +
Sbjct: 64 PEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDT----ASWNTMISGFSQNGMMDQAR 119
Query: 372 -------------W---IHSYI---------QKCRIKP--DVLLSTSLLTMYAKCGVMDL 404
W I Y+ Q + P V+ T+++T + K G ++L
Sbjct: 120 ELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIEL 179
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A F+ M KN+V+WN+MI GY + Q E L++F M + G PN ++ VL C++
Sbjct: 180 AEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSN 239
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
+ G L+ + + + ++ + + G + D+ +L +P + W
Sbjct: 240 LSALKLGKQVHQLICK-SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP-QKDVVTWN 297
Query: 525 ALLSACSTHSNSE 537
A++S + H E
Sbjct: 298 AMISGYAQHGAGE 310
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
LLG C+ + +L+ GK+VH I K ++ SL+ MY CG++ DA K+F P
Sbjct: 234 LLG--CSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQK 291
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMIS-----GYVDVGDMEA 272
D+VTWN+MI GY ++ A LFD M + D T+ +++S G+VD+G +E
Sbjct: 292 DVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLG-IEY 350
Query: 273 ANGLF-DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
N + D + C++D + G + A + +M
Sbjct: 351 FNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM 390
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY-GMHGQGEKALEMFMEM 443
+V+ S ++T + + G ++ A VF++MT K V+WNSM+ GY G+ + A ++F
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLF--- 60
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
R P P+ ++ +L+ H V +FD M + M+ + G+
Sbjct: 61 -DRIPEPDIFSYNIMLACYLHNADVESARLFFDQMP-----VKDTASWNTMISGFSQNGM 114
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
M + EL +P+ + W A++S + +L A+ L E+ P
Sbjct: 115 MDQARELFLVMPVRNSVS-WNAMISGYVESGDLDL----AKQLFEVAP 157
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 184/550 (33%), Positives = 303/550 (55%), Gaps = 37/550 (6%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLV-SGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
PIL + +C T+K IH +LL+ S ++ F +++L+ L + + + FD I
Sbjct: 4 PILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLR-LYSRFGATDYAHKVFDEIT 62
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+P+A++ +++ ++ A S + + M + + ++T + K A + + G+
Sbjct: 63 QPNAYLWTSLIHGYVENRQYDEAFSLFIQ-MRREPISVLNFTISSVLKALARLTRFKGGQ 121
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
V+ GF D +C + D+V+WN MI GY N
Sbjct: 122 AVY------GFAFD-----------EMCEK--------------DIVSWNMMISGYGNND 150
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
V AR+ FD MPER++ +W SMI GYV GDM A LFD MP +D+ SWN M+ GY
Sbjct: 151 RVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMD 210
Query: 298 IGNVTSARNC-FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
IG+ T+ C FD+M M+N+V+W+ ++ Y R + L LF+R D KP+E ++
Sbjct: 211 IGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILG 270
Query: 357 VLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+++AC+ +G+ID + IH+Y+ + D+ + TSL+ MYAKCG ++ A +F+ K
Sbjct: 271 IISACSQLGIIDAAESIIHNYVGPSLLS-DLRVFTSLIDMYAKCGSIEKALQMFEMAHPK 329
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+++ +++MI HG G A+ +F +M++ P+ TF+ VL+AC H G+V EG YF
Sbjct: 330 DLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYF 389
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
M + I+P +HY C+VDLLGR G + ++ L+ +P+ +WGALL+AC H N
Sbjct: 390 KQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCN 449
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+L ++ A L ++EP + G Y+LLSNIYA+ G+W V +R ++E + K GSS +
Sbjct: 450 VQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIE 509
Query: 596 PGEFASESIV 605
E ++
Sbjct: 510 LSHVVHEFVM 519
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 207/604 (34%), Positives = 334/604 (55%), Gaps = 23/604 (3%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAASRVLK 97
PKP T T + +LQ L + ++ + Q+H + G L ++++ A++ L
Sbjct: 12 PKPSSTSTFDSLQ-----CGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATK-LA 65
Query: 98 KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
+ + FD I ++F+ N++++ + N P AL F Y KM+ + ++
Sbjct: 66 ACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRAL-FLYLKMLHFGQKPDN 124
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
+T+P + K C + G+KVHA +V G E D++V NS++ MY G+V AR VF+
Sbjct: 125 FTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDR 184
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF-----TWNSMISGYVDVGDMEA 272
V DL +WN+M+ G+VKN E A E+F M RD F T +++S DV D++
Sbjct: 185 MLVRDLTSWNTMMSGFVKNGEARGAFEVFGDM-RRDGFVGDRTTLLALLSACGDVMDLKV 243
Query: 273 ANGLFDLMPFRDVVS--------WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ + R+ S N +ID Y +V+ AR F+ + +++VVSWN L++
Sbjct: 244 GKEIHGYV-VRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLIS 302
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y +C D + L LF RM+ A P+E +++SVL AC + + +G + SY+ K
Sbjct: 303 GYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV 362
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
+V++ T+L+ MYA CG + A VFD M EKN+ + M+ G+G+HG+G +A+ +F EM
Sbjct: 363 NVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEML 422
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
+G TP++ F VLSAC+H+G+V EG F M R Y +EP+ HY C+VDLLGRAG +
Sbjct: 423 GKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYL 482
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ ++ + ++ +W ALLSAC H N +L I AQ L EL P YV LSNIY
Sbjct: 483 DEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIY 542
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIG 624
A+E +W++VEN+R ++ ++ L K S V + + V + + +Y+ L ++
Sbjct: 543 AAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLN 602
Query: 625 AQMK 628
Q+K
Sbjct: 603 EQLK 606
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 251/404 (62%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ ++I G + +AR++F++ P ++V W SMI GY N +V AR+LF+ MP
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP 229
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+++ TW +M+ GY G + A LF MP + V + N MI G+ G V AR FD+
Sbjct: 230 DKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQ 289
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M ++ +W+ L+ +Y R E L LF M R +PN S++S+L+ C ++ +D G
Sbjct: 290 MKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHG 349
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +HS + + D+ +S+ L+TMY KCG + + VFD + K++V WNS+I GY H
Sbjct: 350 RQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQH 409
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GEKALE+F EM G P++ TFI VLSAC + G V EG F+ M+ Y+++ K EH
Sbjct: 410 GFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEH 469
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CMVDLLGRAG + ++ L+ +P+EA +WGALLSAC TH N +L +I A+ L++LE
Sbjct: 470 YACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLE 529
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
P GPY+LLSN+YAS+ +W +V LR+ M+ + + K+ G S +
Sbjct: 530 PSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWI 573
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 22/353 (6%)
Query: 199 IHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWN 258
I ++ G++ AR +F+D + +WN+++ GY N+ A++LFD MPER+ +WN
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
++SGYV G + A +FD MP R+VVSW M+ GY + G + A F RM +NVVS
Sbjct: 83 GLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVS 142
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W ++L + E RLFD + K AS + C+ + + + Q
Sbjct: 143 WTVMLGGLIEDGRVDEARRLFDMI---PVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQ 199
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
+ +V+ TS+++ YA +D+AR +F+ M +KN V+W +M+ GY G+ +A E
Sbjct: 200 R-----NVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAE 254
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
+F M P A ++ G V + W FD M+ E + ++ +
Sbjct: 255 LFKAM----PVKPVAACNGMIMGFGLNGEVGKARWVFDQMK-----EKDDGTWSALIKIY 305
Query: 499 GRAGLMRDSEELVSKLPMEA----GPALWGALLSACSTHSNSELGKIVAQHLM 547
R G ++ L S + E P++ ++LS C + ++ + G+ V L+
Sbjct: 306 ERKGFELEALALFSLMQREGVRPNFPSII-SILSVCGSLASLDHGRQVHSQLV 357
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 151/287 (52%), Gaps = 16/287 (5%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ Y +A+K+F+ P + ++WN ++ GYVKN + AR++FD MPER++
Sbjct: 51 NAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVV 110
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W SM+ GYV G ++ A LF MP ++VVSW M+ G + G V AR FD + +++
Sbjct: 111 SWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD 170
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+ ++ E +FD M + N + S+++ A +D+ + +
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEM----PQRNVVAWTSMISGYAMNNKVDVARKLFE 226
Query: 376 YIQKCRIKPDV--LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+ PD + T++L Y + G ++ A +F M K V + N MIMG+G++G+
Sbjct: 227 ------VMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEV 280
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
KA +F +M+++ +D T+ ++ G LE F LMQR
Sbjct: 281 GKARWVFDQMKEK----DDGTWSALIKIYERKGFELEALALFSLMQR 323
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 137/267 (51%), Gaps = 8/267 (2%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N L+ Y G + +ARKVF+ P ++V+W SM+ GYV+ + A LF MPE+++
Sbjct: 82 NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVV 141
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W M+ G ++ G ++ A LFD++P +DVV+ MI G G ++ AR FD M RN
Sbjct: 142 SWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRN 201
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+W +++ Y +LF+ M NE + ++L G I+
Sbjct: 202 VVAWTSMISGYAMNNKVDVARKLFEVM----PDKNEVTWTAMLKGYTRSGRINEAA---E 254
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ +KP V ++ + G + AR VFD M EK+ +W+++I Y G +
Sbjct: 255 LFKAMPVKP-VAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELE 313
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSAC 462
AL +F M++ G PN + I +LS C
Sbjct: 314 ALALFSLMQREGVRPNFPSIISILSVC 340
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 131/313 (41%), Gaps = 59/313 (18%)
Query: 277 FDLMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
F L+P+R S C I +A++G + ARN FD + + V SWN ++A Y K
Sbjct: 3 FRLIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKR 62
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E +LFD+M P ++ W
Sbjct: 63 PAEAQKLFDKM------PERNTI----------------SW-----------------NG 83
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L++ Y K G++ AR VFD M E+NVVSW SM+ GY G ++A +F M P N
Sbjct: 84 LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRM----PEKN 139
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
++ +L G V E FD++ V M+ L G + ++ E+
Sbjct: 140 VVSWTVMLGGLIEDGRVDEARRLFDMIP-----VKDVVASTNMIGGLCSEGRLSEAREIF 194
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP-RDPGPYVLLSNIYASEGKW 570
++P A W +++S + ++ + VA+ L E+ P ++ + + Y G+
Sbjct: 195 DEMPQRNVVA-WTSMISGYAMNNKVD----VARKLFEVMPDKNEVTWTAMLKGYTRSGRI 249
Query: 571 DEVENLRRIMKEK 583
+E L + M K
Sbjct: 250 NEAAELFKAMPVK 262
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 11/222 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD ++E D + ++K + AL+ + M + V N + + VC + S
Sbjct: 287 FDQMKEKDDGTWSALIKIYERKGFELEALALF-SLMQREGVRPNFPSIISILSVCGSLAS 345
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G++VH+++V+ F+LD++V + LI MY CG+++ ++VF+ D+V WNS+I G
Sbjct: 346 LDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAG 405
Query: 233 YVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
Y ++ + + E+F D T+ ++S G ++ +F+ M + V
Sbjct: 406 YAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQ 465
Query: 288 ----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ CM+D + G + A N + M + + + W LL+
Sbjct: 466 KTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLS 507
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/553 (35%), Positives = 305/553 (55%), Gaps = 20/553 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC--TSLSSVSLSVLFFDGIQ 117
IL L C +++E ++H L+V+ + S L C + ++ + L I
Sbjct: 7 ILSLLAKCKSMRELKKLHG-LIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIH 65
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P ++ N++++ F+ ++P ++ Y +M+ +H+TFP + K C I GK
Sbjct: 66 NPSVYIWNSMIRGFVNSHNPRMSM-LLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGK 124
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+H+ IVK GFE D + L+HMY C ++ KVF++ P W++V W +I GYVKN
Sbjct: 125 CIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNN 184
Query: 238 EVGFARELFDFMPE-----RDIFTWNSMI----SGYVDVGD------MEAANGLFDLMPF 282
+ A ++F+ M +I N++I S +D G +A F
Sbjct: 185 QPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSN 244
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+++ +++ YAK G + AR+ F++M RN+VSWN ++ Y + + + E L LF M
Sbjct: 245 SNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDM 304
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
P++A+ +SVL+ CA+ + +GQ +H+Y+ K I D+ L+T+LL MYAK G +
Sbjct: 305 WTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGEL 364
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDATFICVLSA 461
A+ +F ++ +K+VV W SMI G MHG G +AL MF M E P+ T+I VL A
Sbjct: 365 GNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFA 424
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C+H G+V E +F LM +Y + P EHYGCMVDLL RAG R++E L+ + ++ A
Sbjct: 425 CSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPNIA 484
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+WGALL+ C H N + V L ELEP G ++LLSNIYA G+W+EV R++MK
Sbjct: 485 IWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNVTRKVMK 544
Query: 582 EKELEKAVGSSLV 594
K + K +G S V
Sbjct: 545 HKRITKTIGHSSV 557
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 271/450 (60%), Gaps = 8/450 (1%)
Query: 147 KMMAKFVEHNH--YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ + E NH YT L G + AG + E +++ + + D+ +++ Y
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAG--RVNEARRLFDEMP----DRDVVAWTAMLSGYCQ 186
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G + +AR +F++ P ++V+W +MI GY +N EV AR+LF+ MPER+ +W +M+ GY
Sbjct: 187 AGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGY 246
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ G +E A LF+ MP V + N M+ G+ + G V +A+ F++MC R+ +W+ ++
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIK 306
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y + + E L F M+ +PN S++S+LT CA + V+D G+ +H+ + +C
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
DV ++L+TMY KCG +D A+ VF K++V WNSMI GY HG GE+AL +F +M
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
G +P+ T+I L+AC++ G V EG F+ M I P EHY CMVDLLGR+GL+
Sbjct: 427 LAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLV 486
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ +L+ +P+E +WGAL+ AC H N+E+ + A+ L+ELEP + GPYVLLS+IY
Sbjct: 487 EEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIY 546
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
S G+W++ +R+ + + L K+ G S +
Sbjct: 547 TSVGRWEDASKMRKFISSRNLNKSPGCSWI 576
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 142/275 (51%), Gaps = 10/275 (3%)
Query: 191 DLFVRNSLIHMYSVCGEVL-DARKVFEDGPVW-DLVTWNSMIDGYVKNREVGFARELFDF 248
DL N+LI S+ + L DA P +V++ S++ GYV++ + A LF
Sbjct: 78 DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+ ++ ++ G +D G + A LFD MP RDVV+W M+ GY + G +T AR F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D M RNVVSW +++ Y + + +LF+ M + NE S ++L G ++
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVM----PERNEVSWTAMLVGYIQAGHVE 253
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+ + + + V +++ + + G++D A+ VF+ M E++ +W++MI Y
Sbjct: 254 DAAELFNAMP----EHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYE 309
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
+ +AL F EM RG PN + I +L+ C
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 20/305 (6%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
N+ I + + AR F+ MP R ++N++++GY +AA GLF MP RD+
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 287 SWNCMIDGYA-KIGNVTSARNCFDRMCM-RNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
S+N +I G + + + A + +VVS+ LL YVR + +RLF +M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ N S +L + G ++ + + + DV+ T++L+ Y + G +
Sbjct: 139 --PERNHVSYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR +FD M ++NVVSW +MI GY +G+ A ++F M +R N+ ++ +L
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQ 248
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG V + F+ M E V M+ G+ G++ ++ + K+ E W
Sbjct: 249 AGHVEDAAELFNAMP-----EHPVAACNAMMVGFGQRGMVDAAKTVFEKM-CERDDGTWS 302
Query: 525 ALLSA 529
A++ A
Sbjct: 303 AMIKA 307
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ + E D + ++K++ ALS + E M+ + V N+ + + VCA +
Sbjct: 290 FEKMCERDDGTWSAMIKAYEQNEFLMEALSTFRE-MLWRGVRPNYPSVISILTVCAALAV 348
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G++VHA +++C F++D+F ++LI MY CG + A++VF D+V WNSMI G
Sbjct: 349 LDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITG 408
Query: 233 YVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
Y ++ + +G ++ D T+ ++ G ++ +F+ M +
Sbjct: 409 YAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRP 468
Query: 288 ----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
++CM+D + G V A + M + + V W L+
Sbjct: 469 GAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMG 510
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 271/450 (60%), Gaps = 8/450 (1%)
Query: 147 KMMAKFVEHNH--YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ + E NH YT L G + AG + E +++ + + D+ +++ Y
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAG--RVNEARRLFDEMP----DRDVVAWTAMLSGYCQ 186
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G + +AR +F++ P ++V+W +MI GY +N EV AR+LF+ MPER+ +W +M+ GY
Sbjct: 187 AGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGY 246
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ G +E A LF+ MP V + N M+ G+ + G V +A+ F++MC R+ +W+ ++
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIK 306
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y + + E L F M+ +PN S++S+LT CA + V+D G+ +H+ + +C
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
DV ++L+TMY KCG +D A+ VF K++V WNSMI GY HG GE+AL +F +M
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
G +P+ T+I L+AC++ G V EG F+ M I P EHY CMVDLLGR+GL+
Sbjct: 427 LAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLV 486
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ +L+ +P+E +WGAL+ AC H N+E+ + A+ L+ELEP + GPYVLLS+IY
Sbjct: 487 EEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIY 546
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
S G+W++ +R+ + + L K+ G S +
Sbjct: 547 TSVGRWEDASKMRKFISSRNLNKSPGCSWI 576
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 12/276 (4%)
Query: 191 DLFVRNSLIHMYSVCGEVL-DARKVFEDGPVW-DLVTWNSMIDGYVKNREVGFARELFDF 248
DL N+LI S+ + L DA P +V++ S++ GYV++ + A LF
Sbjct: 78 DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+ ++ ++ G +D G + A LFD MP RDVV+W M+ GY + G +T AR F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG-VI 367
D M RNVVSW +++ Y + + +LF+ M + NE S ++L G V
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVM----PERNEVSWTAMLVGYIQAGHVE 253
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D + ++ + V +++ + + G++D A+ VF+ M E++ +W++MI Y
Sbjct: 254 DAAELFNAMPEH-----PVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAY 308
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
+ +AL F EM RG PN + I +L+ C
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 20/305 (6%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
N+ I + + AR F+ MP R ++N++++GY +AA GLF MP RD+
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 287 SWNCMIDGYA-KIGNVTSARNCFDRMCM-RNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
S+N +I G + + + A + +VVS+ LL YVR + +RLF +M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ N S +L + G ++ + + + DV+ T++L+ Y + G +
Sbjct: 139 --PERNHVSYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR +FD M ++NVVSW +MI GY +G+ A ++F M +R N+ ++ +L
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQ 248
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG V + F+ M E V M+ G+ G++ ++ + K+ E W
Sbjct: 249 AGHVEDAAELFNAMP-----EHPVAACNAMMVGFGQRGMVDAAKTVFEKM-CERDDGTWS 302
Query: 525 ALLSA 529
A++ A
Sbjct: 303 AMIKA 307
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ + E D + ++K++ ALS + E M+ + V N+ + + VCA +
Sbjct: 290 FEKMCERDDGTWSAMIKAYEQNEFLMEALSTFRE-MLWRGVRPNYPSVISILTVCAALAV 348
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G++VHA +++C F++D+F ++LI MY CG + A++VF D+V WNSMI G
Sbjct: 349 LDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITG 408
Query: 233 YVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
Y ++ + +G ++ D T+ ++ G ++ +F+ M +
Sbjct: 409 YAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRP 468
Query: 288 ----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
++CM+D + G V A + M + + V W L+
Sbjct: 469 GAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMG 510
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 306/532 (57%), Gaps = 12/532 (2%)
Query: 75 QIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSVSLSV-LFFDGIQEPDAFMC-NTIMKSF 131
Q+H L+ SG L+ + + +L+ S + + +V LF G + P + C N +M++F
Sbjct: 34 QLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAF 93
Query: 132 LMLNDPFGALSFYYEKM-MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL 190
L P AL + E + A + +T K C+ + +L G+ V A VK G
Sbjct: 94 LHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVA 153
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D FV +SLIHMY+ CG+V AR VF+ +V WN+++ Y+KN + E+F M
Sbjct: 154 DRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGML 213
Query: 251 ER----DIFTWNSMISGYVDVGDME----AANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
E D T S+++ +GD + A + + R+ ++D YAK G +
Sbjct: 214 EVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIG 273
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR FD M R+VV+W+ +++ Y + E L LF M +PN+ +++SVL+ACA
Sbjct: 274 KARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACA 333
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G ++ G+W+HSY+++ R+ +L T+L+ YAKCG +D A F++M KN +W +
Sbjct: 334 VLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTA 393
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I G +G+G +ALE+F M + G P D TFI VL AC+H+ +V EG +FD M R Y
Sbjct: 394 LIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDY 453
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
I+P+VEHYGCMVDLLGRAGL+ ++ + + +P+E +W ALLS+C+ H N +G+
Sbjct: 454 GIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEA 513
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ ++ L P G YVLLSNIYAS G+W + +R+ MK++ +EK G SL+
Sbjct: 514 LKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLI 565
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 212/598 (35%), Positives = 327/598 (54%), Gaps = 21/598 (3%)
Query: 50 RLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG---LSQDSFAASRVLKKLC---TSL 103
RLP + P Q + +++ Q+H LL SG S DSF + L TS
Sbjct: 57 RLPAPGMPSPARQTPRR-AALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSS 115
Query: 104 SSVSLSV-LFFDGIQEP-DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
+ +S ++ LF G P A N +++SFL P AL + E + V + +T
Sbjct: 116 AHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVA 175
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
K C+ + L G+ V A K GF +D FV NSLIHMY+ CG+V+ A +F V
Sbjct: 176 NTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVK 235
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPE-RDIFTWNSMISGYVDVGDMEAAN-GLF-- 277
++ WN+MI GYVKN + E+F M E R F +++S G + AN G +
Sbjct: 236 GVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIA 295
Query: 278 ------DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
++ R++ + ++D YAK G + AR FDRM R+VV+W+ +++ Y +
Sbjct: 296 EYAEEKGMLRSRNLAT--ALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDR 353
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E L +F+ M + PN+ +++SVL+ACA +G ++ G+W+HSYI++ + V+L T+
Sbjct: 354 CREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTA 413
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ YAKCG + A F++M +N +W ++I G +G+ +ALE+F M + P
Sbjct: 414 LVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPT 473
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
D TFI VL AC+H +V EG +F M + Y I P++EHYGCMVDLLGRAGL+ ++ + +
Sbjct: 474 DVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFI 533
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+P+E +W ALLSAC+ H N E+G+ + ++ L+P G Y+LLSN YAS G+W
Sbjct: 534 RNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWK 593
Query: 572 EVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+R+ MKEK +EK G SL+ E E+ + +Y + E+ +KM
Sbjct: 594 NAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKM 651
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 273/450 (60%), Gaps = 8/450 (1%)
Query: 147 KMMAKFVEHNH--YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ + E NH YT L G + AG + E +K+ + D+ +++ Y
Sbjct: 133 QLFRQMPERNHISYTVLLGGFLDAG--RVDEARKLFDEMPAK----DVVAWTAMLSGYCQ 186
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G V +AR +F++ P ++V+W +M+ GY +N +V AR+LF+ MPER+ +W +M+ GY
Sbjct: 187 VGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGY 246
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ G +E A LF+ MP + + N MI G+ + G V +A++ FDRMC R+ +W+ ++
Sbjct: 247 IQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIK 306
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y + + E L F M+ +PN S++S+LT CA + V+D G+ +H + +
Sbjct: 307 AYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDM 366
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
D+ ++L+TMY KCG +D A+ VF K+VV WNSMI GY HG GE+AL +F +M
Sbjct: 367 DIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMR 426
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
G P+ T+I L+AC++ G V EG F+ M+ I+P +EHY CMVDLLGRAGL+
Sbjct: 427 LAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLV 486
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ L+ +P+E +WGAL+ AC H N+E+ +I A+ L+ELEP + GPYVLLS+IY
Sbjct: 487 DEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYVLLSHIY 546
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
S G+W++ N+R+ + + L K++G S +
Sbjct: 547 TSSGRWEDASNMRKFISSRHLNKSLGCSWI 576
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 145/277 (52%), Gaps = 14/277 (5%)
Query: 191 DLFVRNSLIHMYSVCGEVL-DARKVFEDGPVW-DLVTWNSMIDGYVKNREVGFARELFDF 248
DL N+LI S+ L DA P +V++ S++ GYV++ + A +LF
Sbjct: 78 DLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQ 137
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+ ++ ++ G++D G ++ A LFD MP +DVV+W M+ GY ++G V AR F
Sbjct: 138 MPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLF 197
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D M RNVVSW +++ Y + +LF+ M + NE S ++L G I+
Sbjct: 198 DEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVM----PERNEVSWTAMLFGYIQAGRIE 253
Query: 369 IGQWIHSYIQKCRIKPDVLLST--SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ + + + PD L+ ++ + + G++D A++VFD M E++ +W+++I
Sbjct: 254 DAEELFNAM------PDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKA 307
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
Y + +AL F EM G PN + I +L+ C
Sbjct: 308 YEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCA 344
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 24/311 (7%)
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
+V N+ I + + AR F+ MP R ++N++++GY +AA +F MP
Sbjct: 17 VVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPT 76
Query: 283 RDVVSWNCMIDGYA-KIGNVTSARNCFDRMCM-RNVVSWNILLALYVRCKDYCECLRLFD 340
RD+ S+N +I G + + + A + +VVS+ LL YVR + ++LF
Sbjct: 77 RDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFR 136
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+M + N S +L + G +D + + + DV+ T++L+ Y + G
Sbjct: 137 QM----PERNHISYTVLLGGFLDAGRVDEARKLFDEMP----AKDVVAWTAMLSGYCQVG 188
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+D AR +FD M ++NVVSW +M+ GY +GQ A ++F M +R N+ ++ +L
Sbjct: 189 RVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPER----NEVSWTAMLF 244
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVSKLPMEA 518
AG + + F+ M P C M+ G+ G++ ++ + ++ E
Sbjct: 245 GYIQAGRIEDAEELFNAM-------PDHPLAACNGMIVGFGQQGMVDAAKSVFDRM-CER 296
Query: 519 GPALWGALLSA 529
W A++ A
Sbjct: 297 DDGTWSAIIKA 307
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E D + I+K++ ALS + E M+ + N+ + + VCA +
Sbjct: 290 FDRMCERDDGTWSAIIKAYEQNEFLMEALSTFRE-MLHIGIRPNYPSVISILTVCAALAV 348
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G++VH +++ F++D++ ++LI MY CG + A++VF D+V WNSMI G
Sbjct: 349 LDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITG 408
Query: 233 YVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
Y ++ A +FD M D T+ ++ G ++ +F+ M + +
Sbjct: 409 YAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKP 468
Query: 288 ----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ CM+D + G V A M + + V W L+
Sbjct: 469 GLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMG 510
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 278/501 (55%), Gaps = 46/501 (9%)
Query: 120 DAFMCNTIMK----SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ F+ NT+++ + L+ DP L +Y + + A + H TF L K + ++E
Sbjct: 53 NVFVWNTMIRKQVENGLITRDP--PLLYYMQGLRAGLRPNGH-TFMYLLKALVSGQEVKE 109
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV- 234
G++VHA +V+ GF FV +L+ Y CG V R+VF++ LV W +I YV
Sbjct: 110 GEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVC 169
Query: 235 ------------KNREVGF----------------------ARELFDFMP----ERDIFT 256
REVG A+ + F+ E D F
Sbjct: 170 VTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFV 229
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
+++IS Y + G ++ A F P +++V WN MI + N+ + F M R+V
Sbjct: 230 SSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDV 289
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSWN ++ + R Y E L F M PN +L+S L+ACA+ G +D G WIH+Y
Sbjct: 290 VSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAY 349
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ K + D L +SL+ MY+KCG +D A +F+ T +++ +W S++ G MHG+GEKA
Sbjct: 350 VDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKA 409
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L F +M++ P+D T + VLSAC HAG++ +GWWYF M++++ + PKVEHYGCMVD
Sbjct: 410 LHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVD 469
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGR G ++++ +L+ +PMEA +WGA LSAC H+N ELG++ A+ L+ L+PRDP
Sbjct: 470 LLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWA 529
Query: 557 YVLLSNIYASEGKWDEVENLR 577
V+LSN+YA E KWD LR
Sbjct: 530 RVMLSNMYAEEAKWDRSMGLR 550
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 195/436 (44%), Gaps = 52/436 (11%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ L S VKE ++H ++ +G + F + +L + V FD +++P
Sbjct: 97 LLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLG-FYVACGLVGKGRQVFDEMRQP 155
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ I+++++ + P AL + M + + + C + L K +
Sbjct: 156 GLVLWTLIIRAYVCVTFPEKALELF-RTMREVGLTPDMVAISTVVSACGLLGDLGVAKAM 214
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H I K G E+D FV ++LI Y CG + A + F++ P+ ++V WN+MI V++ +
Sbjct: 215 HCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNL 274
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR---------------- 283
++LF MP+RD+ +WNSMI G+ +G + A F M F
Sbjct: 275 ELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSAC 334
Query: 284 ------DVVSW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
D +W + +ID Y+K G++ A F+ R++ +W
Sbjct: 335 ASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWT 394
Query: 321 IL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
+ LA++ R + + L F +M +P++ +++ VL+ACA+ G++D G W +
Sbjct: 395 SIVCGLAMHGRGE---KALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSM 451
Query: 378 QKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ--- 432
+K + P V ++ + + G + A ++ M E N + W + + +H
Sbjct: 452 EKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVEL 511
Query: 433 GEKALEMFMEMEKRGP 448
GE A + ++ R P
Sbjct: 512 GEVAARRLLGLDPRDP 527
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 113/267 (42%), Gaps = 11/267 (4%)
Query: 310 RMCMRNVVSWNILLALYVR----CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
R+ NV WN ++ V +D L + + +R +PN + M +L A +
Sbjct: 48 RLDCANVFVWNTMIRKQVENGLITRD--PPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQ 105
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+ +H+ + + +S +LL Y CG++ R VFD M + +V W +I
Sbjct: 106 EVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIR 165
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
Y EKALE+F M + G TP+ V+SAC G + +++ IE
Sbjct: 166 AYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEK-SGIE 224
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
++ G G + + + PM+ +W ++ H+N ELGK Q
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGK---QL 280
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDE 572
+ RD + + +A G++ E
Sbjct: 281 FQSMPDRDVVSWNSMIGGFARIGQYQE 307
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/387 (43%), Positives = 239/387 (61%)
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
V DAR F+ P+ D+ +WN+MI + +G AR LF MPE++ +W++M+SGYV
Sbjct: 120 VHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVAC 179
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
GD++AA F P R V++W MI GY K G V A F M MR +V+WN ++A YV
Sbjct: 180 GDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYV 239
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ LRLF M+ KPN SL SVL C+N+ + +G+ +H + KC + D
Sbjct: 240 ENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTT 299
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
TSL++MY+KCG + A +F + K+VV WN+MI GY HG G+KAL +F EM+K G
Sbjct: 300 AGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEG 359
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P+ TF+ VL AC HAG+V G YF+ M+R + IE K EHY CMVDLLGRAG + ++
Sbjct: 360 LKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEA 419
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+L+ +P + PA++G LL AC H N L + A++L+EL+P YV L+N+YA++
Sbjct: 420 VDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQ 479
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLV 594
+WD V ++RR MK+ + K G S +
Sbjct: 480 NRWDHVASIRRSMKDNNVVKIPGYSWI 506
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T LLG C+ + +L+ GK+VH + KC D SL+ MYS CG++ DA ++F
Sbjct: 267 TSVLLG--CSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQI 324
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMI-----SGYVDVGD 269
P D+V WN+MI GY ++ A LFD M + D T+ +++ +G VD+G
Sbjct: 325 PRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGV 384
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
D + CM+D + G ++ A + M
Sbjct: 385 QYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSM 426
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 26/197 (13%)
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD-VLLSTSLL 393
CLRL R R +LT+ + + +++ S+ + + V+ S L+
Sbjct: 3 CLRLLRRKKRS----------PLLTS----SFVTLSKYVSSHTHQHEFNNNNVIASNKLI 48
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKALEMFMEMEKRGPTPND 452
Y +CG +D A VF++M K+ V+WNS++ + G E A ++F ++ P PN
Sbjct: 49 ASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI----PQPNT 104
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
++ +L+ H V + +FD M V + M+ L + GLM ++ L S
Sbjct: 105 VSYNIMLACHWHHLGVHDARGFFDSMPL-----KDVASWNTMISALAQVGLMGEARRLFS 159
Query: 513 KLPMEAGPALWGALLSA 529
+P E W A++S
Sbjct: 160 AMP-EKNCVSWSAMVSG 175
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 298/499 (59%), Gaps = 25/499 (5%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+ + E +A N ++ FL+ D A+ F+ + M + HY+ L + +R
Sbjct: 157 LFNAMPERNAVSSNALITGFLLNGDVDSAVDFF--RTMPE-----HYSTSLSALISGLVR 209
Query: 172 SLREGKKVHARIVKCGFELDLFVR--NSLIHMYSVCGEVLDARKVFEDGP---------- 219
+ E + +CG D V N+LI Y G V +AR++F+ P
Sbjct: 210 N-GELDMAAGILCECGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQ 268
Query: 220 ---VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL 276
++V+WNSM+ YVK ++ ARELFD M E+D +WN+MISGYV + +ME A+ L
Sbjct: 269 RRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKL 328
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
F MP DV+SWN ++ G+A+ G++ A++ F+RM ++N++SWN ++A Y + +DY +
Sbjct: 329 FREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAI 388
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
+LF RM +P+ +L SV++ C + + +G+ IH + K I PD ++ SL+TMY
Sbjct: 389 QLFSRMQFEGERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVI-PDSPINNSLITMY 447
Query: 397 AKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
++CG + A VF+ + K+V++WN+MI GY HG +ALE+F M++ P TF
Sbjct: 448 SRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITF 507
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
I V++AC HAG+V EG F M Y IE +VEH+ +VD+LGR G ++++ +L++ +P
Sbjct: 508 ISVMNACAHAGLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMP 567
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+ A+WGALLSAC H+N EL + A L+ LEP PYVLL NIYA+ G+WD+ E+
Sbjct: 568 FKPDKAVWGALLSACRVHNNVELALVAADALIRLEPESSAPYVLLYNIYANLGQWDDAES 627
Query: 576 LRRIMKEKELEKAVGSSLV 594
+R +M+EK ++K G S V
Sbjct: 628 VRVLMEEKNVKKQAGYSWV 646
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 222/489 (45%), Gaps = 48/489 (9%)
Query: 73 FHQI------HTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLS--VLFFDGIQEPDAFMC 124
FHQ+ H + +S +R KK+ + S LS FD ++ D
Sbjct: 14 FHQLPRIRYCHASASPTHKYNNSSPLNRSNKKISNLIRSGRLSEARALFDSMKHRDTVTW 73
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N+++ ++ + A + E V N C G R + EG+++
Sbjct: 74 NSMITGYVHRREIARARQLFDEMPRRDVVSWNLIVSGYFS--CRGSRFVEEGRRL----- 126
Query: 185 KCGFEL----DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
FEL D N++I Y+ G + A K+F P + V+ N++I G++ N +V
Sbjct: 127 ---FELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVD 183
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD---VVSWNCMIDGYAK 297
A + F MPE + +++ISG V G+++ A G+ D V ++N +I GY +
Sbjct: 184 SAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIAGYGQ 243
Query: 298 IGNVTSARNCFD-------------RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
G+V AR FD R RNVVSWN ++ YV+ D LFDRM+
Sbjct: 244 RGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVE 303
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
D + +++S +NM + ++ I PDVL +++ +A+ G ++L
Sbjct: 304 QDT-CSWNTMISGYVQISNM------EEASKLFREMPI-PDVLSWNLIVSGFAQKGDLNL 355
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A++ F+ M KN++SWNS+I GY + + A+++F M+ G P+ T V+S CT
Sbjct: 356 AKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTG 415
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
+ G L+ +I + P ++ + R G + D+ + +++ + W
Sbjct: 416 LVNLYLGKQIHQLVTKI--VIPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWN 473
Query: 525 ALLSACSTH 533
A++ ++H
Sbjct: 474 AMIGGYASH 482
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 288/529 (54%), Gaps = 41/529 (7%)
Query: 141 LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
L Y + + +H TFP L K CA ++ G V + K GF D+FV N+ +H
Sbjct: 105 LPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVH 164
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---RE------------------- 238
+SV G ++ AR++F++ P D+V+WN++I GYV++ RE
Sbjct: 165 FWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDE 224
Query: 239 ---------------VGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDL 279
+ + L +F+ + + N+++ YV G +E A +F+
Sbjct: 225 VTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFER 284
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ + VVSW MI G+A++G + AR FD M R+V WN L+A YV+ K E + LF
Sbjct: 285 IDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALF 344
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
M PNE +++++L+AC+ +G +++G W+H YI + ++ V L TSL+ MYAKC
Sbjct: 345 HEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKC 404
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + A +F + +KN ++W +MI G HG ++A+E F M G P++ TFI VL
Sbjct: 405 GNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVL 464
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC HAG+V EG +F LM Y +E K++HY CM+DLLGRAG + ++E+LV+ +PM+
Sbjct: 465 SACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPD 524
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+WGAL AC H N LG+ A L+EL+P D G YVLL+N+YA + + +R +
Sbjct: 525 AVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVM 584
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
M+ +EK G S + E IV++ +Y L I QMK
Sbjct: 585 MRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMK 633
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FD + E D F N +M ++ A++ ++E +K V+ N T L C+ +
Sbjct: 311 MLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESK-VDPNEITMVNLLSACSQL 369
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+L G VH I + L + + SL+ MY+ CG + A +F++ P + +TW +MI
Sbjct: 370 GALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMI 429
Query: 231 DGYVKNREVGFARELF----DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----- 281
G + A E F D + D T+ ++S G ++ F LM
Sbjct: 430 CGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHL 489
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLALYVRCK 330
R + ++CMID + G++ A + M M + V W AL+ C+
Sbjct: 490 ERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWG---ALFFACR 536
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 285/506 (56%), Gaps = 31/506 (6%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
++ FD +QE + N ++ FL D A+ F+ + E + + L + A
Sbjct: 4 ALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFM-----RMPERDSAS---LSALVA 55
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC-------GEVLDARKVFEDGPVW 221
G+ ++ G+ A+ + + L+H Y++ G V AR++F+ P +
Sbjct: 56 GL--IQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFY 113
Query: 222 D------------LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD 269
D +V+WNSMI YVK R++ AR LFD M ERD +WN+MISGYV + D
Sbjct: 114 DGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSD 173
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
ME A LF MP D ++WN MI G+A+ GN+ AR F + +N+VSWN ++A Y
Sbjct: 174 MEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENN 233
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
DY L+ +M+ KP+ +L SVL+ C+ + +G IH I K I PD+ ++
Sbjct: 234 GDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPIN 292
Query: 390 TSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
SL+TMY++CG + AR +FD + +K V+SWN+MI GY HG ALE+F M++
Sbjct: 293 NSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKV 352
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P TFI VL+AC HAG V EG +F M + IEP++EH+ +VD++GR G + ++
Sbjct: 353 RPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAM 412
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+L++ +P E A+WGALL AC H+N EL ++ A+ LM+LEP PYVLL N+YA G
Sbjct: 413 DLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVG 472
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLV 594
+WD +R +M+ + K G S V
Sbjct: 473 QWDNATEMRMMMERNNIRKQPGYSWV 498
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 168/379 (44%), Gaps = 102/379 (26%)
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD---------------- 253
+A ++F+ ++V+WN+M+ G+++N +V A E F MPERD
Sbjct: 3 EALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGE 62
Query: 254 ---------------------IFTWNSMISGYVDVGDMEAANGLFDLMPF---------- 282
+ +N +++GY G ++ A LFD +PF
Sbjct: 63 LDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGR 122
Query: 283 --RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
R+VVSWN MI Y K ++ SAR FD+M R+ +SWN +++ YVR D E LF
Sbjct: 123 FERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQ 182
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M PN PD L S+++ +A+ G
Sbjct: 183 EM------PN---------------------------------PDTLTWNSMISGFAQKG 203
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++LAR +F + +KN+VSWNSMI GY +G + A E++ +M +G P+ T VLS
Sbjct: 204 NLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLS 263
Query: 461 ACT-----HAGMVLEGWWYFDLMQRIYK-IEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
C+ H GM + Q+I K + P + ++ + R G + ++ + ++
Sbjct: 264 VCSGFAALHLGM--------QIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDEV 315
Query: 515 PMEAGPALWGALLSACSTH 533
++ W A++ + H
Sbjct: 316 KLQKEVISWNAMIGGYAFH 334
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 150/346 (43%), Gaps = 29/346 (8%)
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
M+ A LFD M R+VVSWN M+ G+ + G+V A F RM R+ S + L+A ++
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 60
Query: 330 KDYCECLRLFDRMIRGDAKPNE--ASLMSVLTACANMGVIDIGQWIHSYI------QK-- 379
+ E R+ R D + + +L G +D + + I QK
Sbjct: 61 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
R + +V+ S++ Y K + AR +FD M E++ +SWN+MI GY E+A +
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWML 180
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK--VEHYGCMVDL 497
F EM P P+ T+ ++S G +L + ++ P+ + + M+
Sbjct: 181 FQEM----PNPDTLTWNSMISGFAQKG-------NLELARALFATIPQKNLVSWNSMIAG 229
Query: 498 LGRAGLMRDSEELVSKLPMEAGPA---LWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
G + + EL ++ ++ ++LS CS + LG + Q + + D
Sbjct: 230 YENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDI 289
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
L +Y+ G E R I E +L+K V S G +A
Sbjct: 290 PINNSLITMYSRCGAIVEA---RTIFDEVKLQKEVISWNAMIGGYA 332
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 285/506 (56%), Gaps = 31/506 (6%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
++ FD +QE + N ++ FL D A+ F+ + E + + L + A
Sbjct: 181 ALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFM-----RMPERDSAS---LSALVA 232
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC-------GEVLDARKVFEDGPVW 221
G+ ++ G+ A+ + + L+H Y++ G V AR++F+ P +
Sbjct: 233 GL--IQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFY 290
Query: 222 D------------LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD 269
D +V+WNSMI YVK R++ AR LFD M ERD +WN+MISGYV + D
Sbjct: 291 DGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSD 350
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
ME A LF MP D ++WN MI G+A+ GN+ AR F + +N+VSWN ++A Y
Sbjct: 351 MEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENN 410
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
DY L+ +M+ KP+ +L SVL+ C+ + +G IH I K I PD+ ++
Sbjct: 411 GDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPIN 469
Query: 390 TSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
SL+TMY++CG + AR +FD + +K V+SWN+MI GY HG ALE+F M++
Sbjct: 470 NSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKV 529
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P TFI VL+AC HAG V EG +F M + IEP++EH+ +VD++GR G + ++
Sbjct: 530 RPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAM 589
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+L++ +P E A+WGALL AC H+N EL ++ A+ LM+LEP PYVLL N+YA G
Sbjct: 590 DLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVG 649
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLV 594
+WD +R +M+ + K G S V
Sbjct: 650 QWDNATEMRMMMERNNIRKQPGYSWV 675
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 209/468 (44%), Gaps = 70/468 (14%)
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K LDL+ N I G + +AR +F+ P ++VTWNSMI GYV+ RE+ AR+
Sbjct: 60 KNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARK 119
Query: 245 LFDFMPERDIFTWNSMISGYVDVGD--MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
LFD MP+RD+ +WN MISGYV +E LFD MP RD VSWN MI GY + G +
Sbjct: 120 LFDEMPDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMD 179
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
A FD M RNVVSWN ++ +++ D + F RM D+ ASL +++
Sbjct: 180 EALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDS----ASLSALVAGLI 235
Query: 363 NMGVI---------------DIGQWIHSY------------IQKC--------------- 380
G + D G +H+Y + K
Sbjct: 236 QNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQK 295
Query: 381 ---RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
R + +V+ S++ Y K + AR +FD M E++ +SWN+MI GY E+A
Sbjct: 296 DGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAW 355
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK--VEHYGCMV 495
+F EM P P+ T+ ++S G +L + ++ P+ + + M+
Sbjct: 356 MLFQEM----PNPDTLTWNSMISGFAQKG-------NLELARALFATIPQKNLVSWNSMI 404
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPA---LWGALLSACSTHSNSELGKIVAQHLMELEPR 552
G + + EL ++ ++ ++LS CS + LG + Q + +
Sbjct: 405 AGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIP 464
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
D L +Y+ G E R I E +L+K V S G +A
Sbjct: 465 DIPINNSLITMYSRCGAIVEA---RTIFDEVKLQKEVISWNAMIGGYA 509
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/501 (36%), Positives = 295/501 (58%), Gaps = 27/501 (5%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS- 203
YE+M V + + +P+L K AG G HA ++K G D FVRN++I MY+
Sbjct: 18 YEQMQGCGVRPDAFVYPILIK-SAGT----GGIGFHAHVLKLGHGSDAFVRNAVIDMYAR 72
Query: 204 --------VCG-----EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
V G A+ +F+ P +++TW +M+ GY K +++ AR FD MP
Sbjct: 73 KVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMP 132
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLM--PFRDVVSWNCMIDGYAKIGNVTSARNCF 308
ER + +WN+M+SGY G E A LFD M +R+ V+WN MI Y ++G++ SAR F
Sbjct: 133 ERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLF 192
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVI 367
+ M RNVV+WN ++A Y + + LF MI P+E +++SV++AC ++G +
Sbjct: 193 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 252
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
++G W+ ++ + +IK + +++ MY++CG M+ A+ VF M ++VVS+N++I G+
Sbjct: 253 ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 312
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG G +A+ + M++ G P+ TFI VL+AC+HAG++ EG F+ ++ +P
Sbjct: 313 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPA 367
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
++HY CMVDLLGR G + D++ + ++PME ++G+LL+A H ELG++ A L
Sbjct: 368 IDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLF 427
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
ELEP + G ++LLSNIYAS G+W +VE +R MK+ ++K G S V G + IV +
Sbjct: 428 ELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVAD 487
Query: 608 CPPHRKCIVYSMLGEIGAQMK 628
R +Y +L E+ +M+
Sbjct: 488 RSHERSDDIYQLLIELRKKMR 508
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 95/209 (45%), Gaps = 10/209 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+ + + N+++ + A+ + E + AK + + T + C +
Sbjct: 191 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 250
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L G V + + +L + N++I MYS CG + DA++VF++ D+V++N++I
Sbjct: 251 ALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLIS 310
Query: 232 GYVKNREVGFARELFDFMP-------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
G+ + G E + M E D T+ +++ G +E +F+ +
Sbjct: 311 GFAAH---GHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPA 367
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+ + CM+D ++G + A+ +RM M
Sbjct: 368 IDHYACMVDLLGRVGELEDAKRTMERMPM 396
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 319/567 (56%), Gaps = 14/567 (2%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL--SSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ IH +LL L QD++ + +L C +L S + S L F ++EP+ F+ NT+++
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLIL---CCALDFGSTNYSKLVFSQVKEPNIFLWNTMIR 87
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
L+ D F Y M N++T P + K CA +R G K+H+ +VK G++
Sbjct: 88 G-LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYD 146
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---RE-VGFAREL 245
D+FV+ SL+ +Y C DA KVF+D P ++V+W ++I GY+ + RE +G ++L
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNV 301
+ + D F+ +++ +GD + + D R+V ++D Y K GN+
Sbjct: 207 LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
A F M +++VSW+ ++ Y + L LF +M + KP+ +++ VL+AC
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A +G +D+G W S + + + +L T+L+ MY+KCG + A +F M +K+ V WN
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWN 386
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+M++G M+G + +F +EK G P++ TFI +L CTH G V EG +F+ M+R+
Sbjct: 387 AMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+ + P +EHYGCMVDLLGRAGL+ ++ +L++ +PM+ +WGALL C H ++ L +
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQ 506
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFAS 601
V + L+ELEP + G YV LSNIY+ +W+E E +R MKE++++K S +
Sbjct: 507 VLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVH 566
Query: 602 ESIVENCPPHRKCIVYSMLGEIGAQMK 628
E +V + +Y+ L E+G ++K
Sbjct: 567 EFLVGDKSHWLSEKIYAKLDELGRELK 593
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 318/567 (56%), Gaps = 14/567 (2%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL--SSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ IH +LL L QD++ + +L C +L S + S L F ++EP+ F+ NT+++
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLIL---CCALDFGSTNYSKLVFSQVKEPNIFLWNTMIR 87
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
L+ D F Y M N++T P + K CA +R G K+H+ +VK G++
Sbjct: 88 G-LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYD 146
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---RE-VGFAREL 245
D+FV+ SL+ +Y C DA KVF+D P ++V+W ++I GY+ + RE +G ++L
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNV 301
+ + D F+ +++ +GD + + D R+V ++D Y K GN+
Sbjct: 207 LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
A F M +++VSW+ ++ Y + L LF +M + KP+ +++ VL+AC
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A +G +D+G W S + + + +L T+L+ MY+KCG + A +F M K+ V WN
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWN 386
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+M++G M+G + +F +EK G P++ TFI +L CTH G V EG +F+ M+R+
Sbjct: 387 AMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRV 446
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+ + P +EHYGCMVDLLGRAGL+ ++ +L++ +PM+ +WGALL C H ++ L +
Sbjct: 447 FSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQ 506
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFAS 601
V + L+ELEP + G YV LSNIY+ +W+E E +R MKE++++K S +
Sbjct: 507 VLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVH 566
Query: 602 ESIVENCPPHRKCIVYSMLGEIGAQMK 628
E +V + +Y+ L E+G ++K
Sbjct: 567 EFLVGDKSHWLSEKIYAKLDELGRELK 593
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 293/523 (56%), Gaps = 9/523 (1%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
VSL+ +FD E DA N ++ +++ A + + + N + G
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNAL---MSGY 203
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
V G + E +++ R+ D+ N ++ Y+ G++++AR++F+ PV D+ T
Sbjct: 204 VQWG--KMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
W +++ GY +N + AR +FD MPER+ +WN+M++ Y+ M+ A LF++MP R+V
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 317
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
SWN M+ GYA+ G + A+ FD M ++ VSW +LA Y + E L+LF M R
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
N ++ VL+ CA++ ++ G +H + + + +LL MY KCG M+ A
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
RN F+ M E++VVSWN+MI GY HG G++ALE+F M P+D T + VL+AC+H+
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V +G YF M + + K EHY CM+DLLGRAG + ++ +L+ +P E +WGA
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL A H N ELG+ A+ + ELEP + G YVLLSNIYAS GKW + +R +M+E+ +
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+K G S + +C K +Y+ L ++ +MK
Sbjct: 618 KKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 173/369 (46%), Gaps = 53/369 (14%)
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
L+ F I PD + NT++ + + + A + E + V +N +
Sbjct: 87 LAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYN---VMISSHAN 143
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
G+ SL E D N ++ Y G V +AR +F WD+++WN
Sbjct: 144 HGLVSLAR------HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN 197
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
+++ GYV+ ++ ARELFD MP RD+ +WN M+SGY GDM A LFD P RDV +
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
W ++ GYA+ G + AR FD M RN VSWN ++A Y++ + E LF+ M
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM----- 312
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
C N + W ++LT YA+ G+++ A+
Sbjct: 313 ------------PCRN-----VASW-----------------NTMLTGYAQAGMLEEAKA 338
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT---- 463
VFD M +K+ VSW +M+ Y G E+ L++F+EM + G N + F CVLS C
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 464 -HAGMVLEG 471
GM L G
Sbjct: 399 LECGMQLHG 407
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 29/315 (9%)
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
E ++ N I + G V DA ++F P T+N+M+ GY N + A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
+P D +++N+++ + A GLFD MP RD V++N MI +A G V+ AR+
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD ++ VSWN +LA YVR E LF+ D A LMS M
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNA-LMSGYVQWGKMSEA 212
Query: 368 ----------DIGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMD 403
D+ W + Y ++ + DV T++++ YA+ G+++
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE 272
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD M E+N VSWN+M+ Y ++A E+F M P N A++ +L+
Sbjct: 273 EARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM----PCRNVASWNTMLTGYA 328
Query: 464 HAGMVLEGWWYFDLM 478
AGM+ E FD M
Sbjct: 329 QAGMLEEAKAVFDTM 343
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF 440
R++P+V+ S +T + + G + A +F M ++ ++N+M+ GY +G+ A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 441 MEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+ P P++ ++ +L A + + + FD M
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEM 126
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 289/511 (56%), Gaps = 42/511 (8%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N ++ S+ N P AL+ Y + F E +++ P + K C + + GK++H ++
Sbjct: 93 NFVITSYTKRNQPRNALNVYAQLRKMDF-EVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K G + D+FV N+L+ MY C V AR VF+ D+V+W++MI +N+E A E
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 245 LF---DFMPER----------DIF----------------------------TWNSMISG 263
L +FM R ++F T +++
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
Y G + A LF+ + + VVSW MI G + + AR FD R+V+ W +L
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
+ Y + + LFD+M +P + +++S+L+ CA G +D+G+W+HSYI K R++
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
D +L+T+L+ MYAKCG ++ A +F +++ WN++I G+ MHG GE+AL++F EM
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
E++G PND TFI +L AC+HAG+V EG F+ M + + P++EHYGCMVDLLGRAGL
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
+ ++ E++ +P++ +WGAL++AC H N +LG++ A L+E+EP + G VL+SNI
Sbjct: 512 LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 571
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YA+ +W + +R+ MK ++K G S++
Sbjct: 572 YAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 602
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 169/423 (39%), Gaps = 88/423 (20%)
Query: 170 IRSLREGKKVHARIVKCGFELDLFVR--------------NSLIHMYSVCGEVLDARKVF 215
+ +L + K++HA I+K F L + N +I Y+ + +A V+
Sbjct: 53 LSTLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVY 112
Query: 216 EDGPVWDLVTWNSMIDGYVKN----REVGFARELFDFM----PERDIFTWNSMISGYVDV 267
D N M +K +E+ F+ +RD+F N+++ Y +
Sbjct: 113 AQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGEC 172
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
+E A +FD M RDVVSW+ MI +
Sbjct: 173 ACVEYARLVFDKMMERDVVSWSTMIRSLS------------------------------- 201
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD-- 385
R K++ L L M +P+E +++S++ A+ + +G+ +H+Y+ +
Sbjct: 202 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 261
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG------------------- 426
V +T+LL MYAKCG + LAR +F+ +T+K VVSW +MI G
Sbjct: 262 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQN 321
Query: 427 ------------YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
Y ++A +F +M G P T + +LS C AG + G W
Sbjct: 322 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWV 381
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
+ + ++E +VD+ + G + + L + + +W A+++ + H
Sbjct: 382 HSYIDK-ERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHG 439
Query: 535 NSE 537
E
Sbjct: 440 YGE 442
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 13/263 (4%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
WN ++ Y + L ++ ++ + D + + SVL AC + +G+ IH ++
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K + DV + +L+ MY +C ++ AR VFD M E++VVSW++MI + + + ALE
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG-----C 493
+ EM P++ + +++ + G M EH G
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMG----KAMHAYVIRNSNNEHMGVPTTTA 267
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
++D+ + G + + +L + L + + W A+++ C + E + + + RD
Sbjct: 268 LLDMYAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCIRSNRLEEARALFD---STQNRD 323
Query: 554 PGPYVLLSNIYASEGKWDEVENL 576
+ + + YA D+ NL
Sbjct: 324 VMIWTAMLSAYAQANCIDQAFNL 346
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 330/615 (53%), Gaps = 46/615 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQ--DSFAASRVLKKLCTSLSSVSLSVLFFD 114
++ IL+KL C ++ Q+H +L + ++ +SF + + + S +L+V F
Sbjct: 12 ANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSS-SINLSYALNV--FS 68
Query: 115 GI-QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
I P++ + N ++ ++P + FY +++ + ++F + K + + +L
Sbjct: 69 SIPSPPESIVFNPFLRDLSRSSEPRATILFY-QRIRHVGGRLDQFSFLPILKAVSKVSAL 127
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
EG ++H K D FV + MY+ CG + AR VF++ D+VTWN+MI+ Y
Sbjct: 128 FEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERY 187
Query: 234 VK-----------------------------------NREVGFARELFDFMPERDI---- 254
+ + + R +++F+ E D+
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
++++ Y G M+ A F M R++ M+ GY+K G + A+ FD+ +
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
++V W +++ YV E LR+F+ M KP+ S+ SV++ACAN+G++D +W+H
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S I ++ ++ ++ +L+ MYAKCG +D R+VF+ M +NVVSW+SMI MHG+
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEAS 427
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
AL +F M++ PN+ TF+ VL C+H+G+V EG F M Y I PK+EHYGCM
Sbjct: 428 DALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VDL GRA L+R++ E++ +P+ + +WG+L+SAC H ELGK A+ ++ELEP
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
G VL+SNIYA E +W++V N+RR+M+EK + K G S + + E ++ + +
Sbjct: 548 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 607
Query: 615 IVYSMLGEIGAQMKM 629
+Y+ L E+ +++K+
Sbjct: 608 EIYAKLDEVVSKLKL 622
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 276/451 (61%), Gaps = 14/451 (3%)
Query: 191 DLFVRNSLIHMYSVCGEVLDA----RKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL- 245
DL + N+ I S ++A ++ DG D + S++ VK V R++
Sbjct: 86 DLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIH 145
Query: 246 ---FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
+ D+ S+I Y G + A LFD + F+DV WN M+ GY K+G +
Sbjct: 146 TQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELK 205
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
SAR F+ M RNV+SW L+A Y + E + LF +M + +P+E ++++VL+ACA
Sbjct: 206 SARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACA 265
Query: 363 NMGVIDIGQWIHSYIQK---CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
++G +++G+WIH+YI+K CRI V L +L+ MYAK G + A VF+NM +K+V++
Sbjct: 266 DLGALELGEWIHNYIEKHGLCRI---VSLYNALIDMYAKSGNIRRALEVFENMKQKSVIT 322
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W+++I +HG G +A++MF+ MEK PN+ TF+ +LSAC+H GMV G +YFD MQ
Sbjct: 323 WSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQ 382
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+YKIEPK+EHYGCM+DLL RAG ++++++L+ +P EA +WG+LL+A +TH ++EL
Sbjct: 383 SMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELA 442
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
++ +HL +LEP + G YVLLSN YA+ GKW+E +R++M+ ++KA G S++
Sbjct: 443 QLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNI 502
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMKMC 630
E + + + +Y +L +I Q+KM
Sbjct: 503 VYEFLAGDMSDSQVHEIYHVLCKIILQLKMA 533
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 214/445 (48%), Gaps = 46/445 (10%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L +C +QIH +L L QD+ S+ + CTSL S + F PD +
Sbjct: 31 LSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDA-CTSLGLSSYAFSIFSNKTHPDLRL 89
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
NT +K+ + P A+ + Y ++ + + Y+ P + K + ++ G+++H +
Sbjct: 90 YNTAIKALSKTSSPINAI-WLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQT 148
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
V ++D+ V SLI MYS CG V DARK+F+ D+ WN+M+ GYVK E+ AR
Sbjct: 149 VSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSAR 208
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV------------------ 285
++F+ MP+R++ +W ++I+GY A LF M +V
Sbjct: 209 KVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLG 268
Query: 286 --------------------VS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
VS +N +ID YAK GN+ A F+ M ++V++W+ ++A
Sbjct: 269 ALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIA 328
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC-RIK 383
E + +F RM + +PNE + +++L+AC+++G++D+G++ +Q +I+
Sbjct: 329 ALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIE 388
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFME 442
P + ++ + A+ G + A+ + +M E N + W S++ H E A
Sbjct: 389 PKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKH 448
Query: 443 MEKRGPTPNDATFICVLSACTHAGM 467
+ K P N + VL + T+A +
Sbjct: 449 LAKLEP-GNSGNY--VLLSNTYAAL 470
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/586 (33%), Positives = 334/586 (56%), Gaps = 55/586 (9%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS---LSSVSLSVLFFDGI 116
+ ++ +C T+++ QIH + SG +D+ AA+ +L+ TS + + F+ +
Sbjct: 19 LFPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 78
Query: 117 QEPDAFMCNTIMKSFLMLND--PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ + F NTI++ F ++ A++ + E M +F+E N +TFP + K CA ++
Sbjct: 79 PQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQ 138
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
+GK++H +K GF D FV ++L+ MY +CG + DA +F + ++I+
Sbjct: 139 QGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLF----------YKNIIE--- 185
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
RE+ V + D +G +VV WN MIDG
Sbjct: 186 --------REM-------------------VMMIDRRKRDG--------EVVLWNVMIDG 210
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG-DAKPNEAS 353
Y ++G+ +AR FD+M R+VVSWN +++ Y + + + + +F M +G D +PN +
Sbjct: 211 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVT 270
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
L+SVL A + +G +++G+W+H Y + I+ D +L ++L+ MY+KCG+++ A VF+ +
Sbjct: 271 LVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLP 330
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+NV++W++MI G+ +HGQ A++ F +M + G P+D +I +L+AC+HAG+V EG
Sbjct: 331 RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRR 390
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
YF M + +EP++EHYGCMVDLLGR GL+ ++EE + +P++ +W ALL AC H
Sbjct: 391 YFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMH 450
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N E+GK VA LM++ P D G YV LSN+YAS+G W EV +R MKE ++ K G S
Sbjct: 451 RNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSW 510
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC-RRDVASQI 638
+ E +VE+ R + SML EI ++++ R + +Q+
Sbjct: 511 IDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQV 556
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV----MDLARN 407
+SL + C + D+ Q +I+ +I+ D L + +L A + +D A
Sbjct: 17 SSLFPQINTCRT--IRDLSQIHAVFIKSGQIR-DTLAAAEILRFCATSDLHHRDLDYAHK 73
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEK--ALEMFMEM-EKRGPTPNDATFICVLSACTH 464
+F+ M ++N SWN++I G+ + + A+ +F EM PN TF VL AC
Sbjct: 74 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAK 133
Query: 465 AGMVLEG 471
G + +G
Sbjct: 134 TGKIQQG 140
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 293/523 (56%), Gaps = 9/523 (1%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
VSL+ +FD E DA N ++ +++ A + + + N + G
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNAL---MSGY 203
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
V G + E +++ R+ D+ N ++ Y+ G++++AR++F+ PV D+ T
Sbjct: 204 VQWG--KMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
W +++ GY +N + AR +FD MPER+ +WN+M++ Y+ M+ A LF++MP R+V
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 317
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
SWN M+ GYA+ G + A+ FD M ++ VSW +LA Y + E L+LF M R
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
N ++ VL+ CA++ ++ G +H + + + +LL MY KCG M+ A
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
RN F+ M E++VVSWN+MI GY HG G++ALE+F M P+D T + VL+AC+H+
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V +G YF M + + K EHY CM+DLLGRAG + ++ +L+ +P E +WGA
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL A H N ELG+ A+ + ELEP + G YVLLSNIYAS GKW + +R +M+E+ +
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+K G S + +C K +Y+ L ++ +MK
Sbjct: 618 KKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 173/369 (46%), Gaps = 53/369 (14%)
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
L+ F I PD + NT++ + + + A + E + V +N +
Sbjct: 87 LAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYN---VMISSHAN 143
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
G+ SL E D N ++ Y G V +AR +F WD+++WN
Sbjct: 144 HGLVSLAR------HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN 197
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
+++ GYV+ ++ ARELFD MP RD+ +WN M+SGY GDM A LFD P RDV +
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
W ++ GYA+ G + AR FD M RN VSWN ++A Y++ + E LF+ M
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM----- 312
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
C N + W ++LT YA+ G+++ A+
Sbjct: 313 ------------PCRN-----VASW-----------------NTMLTGYAQAGMLEEAKA 338
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT---- 463
VFD M +K+ VSW +M+ Y G E+ L++F+EM + G N + F CVLS C
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 464 -HAGMVLEG 471
GM L G
Sbjct: 399 LECGMQLHG 407
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 29/315 (9%)
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
E ++ N I + G V DA ++F P T+N+M+ GY N + A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
+P D +++N+++ + A GLFD MP RD V++N MI +A G V+ AR+
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD ++ VSWN +LA YVR E LF+ D A LMS M
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNA-LMSGYVQWGKMSEA 212
Query: 368 ----------DIGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMD 403
D+ W + Y ++ + DV T++++ YA+ G+++
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE 272
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD M E+N VSWN+M+ Y ++A E+F M P N A++ +L+
Sbjct: 273 EARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM----PCRNVASWNTMLTGYA 328
Query: 464 HAGMVLEGWWYFDLM 478
AGM+ E FD M
Sbjct: 329 QAGMLEEAKAVFDTM 343
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF 440
R++P+V+ S +T + + G + A +F M ++ ++N+M+ GY +G+ A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 441 MEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGR 500
+ P P++ ++ +L A + + + FD M + V Y M+
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEM----PVRDSVT-YNVMISSHAN 143
Query: 501 AGLMRDSEELVSKLPMEAGPALWGALLSA 529
GL+ + P E W +L+A
Sbjct: 144 HGLVSLARHYFDLAP-EKDAVSWNGMLAA 171
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 311/572 (54%), Gaps = 43/572 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL---CTSLSSVSLSVLFFDGIQEPD 120
+ + ++ + QIH QL + F++SRV+ + C+SL+SV ++ F + +
Sbjct: 49 IHASNSTHKLRQIHGQLYRCNV----FSSSRVVTQFISSCSSLNSVDYAISIFQRFELKN 104
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+++ N +++ L N F + ++ M+ + + TFP + K A + + G+ +H
Sbjct: 105 SYLFNALIRG-LAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALH 163
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
I+K G E D FVR SL+ MY VK E+G
Sbjct: 164 CGILKFGLEFDSFVRVSLVDMY-------------------------------VKVEELG 192
Query: 241 FARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
A ++FD PE + WN +I GY +GD+ A LFD MP +D SWN +I+G+
Sbjct: 193 SALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFM 252
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K+G++ A+ F +M +NVVSW ++ + + D + L F M+ A+PN+ +++S
Sbjct: 253 KMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVS 312
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
L+ACA +G +D G IH+Y+ K ++++ T+L+ MYAKCG ++ A VF EK
Sbjct: 313 ALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKG 372
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
++ W+ MI G+ +HG KAL+ F M+ G P+ F+ VL+AC+H+G V EG +FD
Sbjct: 373 LLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFD 432
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+R Y IEP ++HY +VD+LGRAG + ++ + + +P+ +WGAL AC TH N
Sbjct: 433 NMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNV 492
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
E+ ++ ++ L++LEP+ PG YV LSN YAS G+WD+ E +R M++ K G S +
Sbjct: 493 EMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEV 552
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ + +R +YS L EI A +
Sbjct: 553 DHKLHRFVAGDNTHNRAVEIYSKLDEISASAR 584
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 294/536 (54%), Gaps = 39/536 (7%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFM 123
++C ++ QIH ++V+GL + ++ S+ ++ + FD I +PD +
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CN +++ P +S Y E M + V + YTF + K C+ + G H ++
Sbjct: 80 CNHVLRGSAQSMKPEKTVSLYTE-MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
V+ GF L+ +V+N+LI ++ CG++ G A
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDL-------------------------------GIAS 167
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
ELFD + W+SM SGY G ++ A LFD MP++D V+WN MI G K + S
Sbjct: 168 ELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDS 227
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FDR ++VV+WN +++ YV C E L +F M P+ +++S+L+ACA
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 364 MGVIDIGQWIHSYI-QKCRIKPDVLLST----SLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+G ++ G+ +H YI + + + + T +L+ MYAKCG +D A VF + ++++
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+WN++I+G +H E ++EMF EM++ PN+ TFI V+ AC+H+G V EG YF LM
Sbjct: 348 TWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ +Y IEP ++HYGCMVD+LGRAG + ++ V + +E +W LL AC + N EL
Sbjct: 407 RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
GK + L+ + + G YVLLSNIYAS G+WD V+ +R++ + ++K G SL+
Sbjct: 467 GKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 132/320 (41%), Gaps = 42/320 (13%)
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A FD + +V N +L + + + L+ M + P+ + VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
AC+ + G H + + + + +L+ +A CG + +A +FD+ + + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+W+SM GY G+ ++A+ +F EM P + + +++ C + FD
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 479 QRIYKIEPKVEHYGCMV----------DLLGRAGLMRDSEE---LVSKLPMEAGPALWGA 525
E V + M+ + LG MRD+ E +V+ L +
Sbjct: 236 -----TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL----------S 280
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYV------LLSNIYASEGKWDEVENLRRI 579
LLSAC+ + E GK + +++E YV L ++YA G D + R
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 580 MKEKELEK----AVGSSLVH 595
+K+++L VG +L H
Sbjct: 341 VKDRDLSTWNTLIVGLALHH 360
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 280/443 (63%), Gaps = 3/443 (0%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++ N++I CG V +AR+ F++ P D+++W +M+ G ++ V AR++FD
Sbjct: 97 ERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDR 156
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER++ +WN+M++GY ++ A LF+ MP R++ SWN MI G+ + G + AR F
Sbjct: 157 MPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVF 216
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVI 367
+ M +NVVSW ++ YV+ + L++F MI+ G A+PNE + ++VL AC++M +
Sbjct: 217 NEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGL 276
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIM 425
GQ +H I K + ++++LL MY+KCG + +AR +FD+ ++++++V WN MI
Sbjct: 277 GEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIA 336
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
Y HG G +A+E+F +M+ G PND +++ +LSAC+HAG+V EG YFD + R I+
Sbjct: 337 AYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQ 396
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
+ +H+ C+VDL GRAG ++++ + + +L +A ++WG LL+ C+ H + E+G++ A+
Sbjct: 397 LREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKE 456
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
L + +P + G Y+LLSNIYAS KW E +R MKEK L+K G S + G +
Sbjct: 457 LEKEDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFLA 516
Query: 606 ENCPPHRKCIVYSMLGEIGAQMK 628
+ ++ ++YS++ +I A+MK
Sbjct: 517 RDKSHYQSNLIYSLVHDIHAEMK 539
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 187/369 (50%), Gaps = 61/369 (16%)
Query: 184 VKCGFELD---LFVR----------NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+KCG +D LF R +++ Y + +A ++FE PV ++V+WN+MI
Sbjct: 17 IKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMI 76
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
DGY KNREV A E+F+ M ER++ +WN++I+ V G +E A FD MP RDV+SW
Sbjct: 77 DGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTT 136
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
M+ G A+ G V AR FDRM RNVVSWN ++ Y + E LF+RM
Sbjct: 137 MVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERM-------- 188
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST--SLLTMYAKCGVMDLARNV 408
P+ LS+ +++T + + G + AR V
Sbjct: 189 ---------------------------------PERNLSSWNTMITGFIQNGELAWARKV 215
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR-GPTPNDATFICVLSACTHAGM 467
F+ M EKNVVSW +MI GY G+ E AL++F+EM K G PN+ TF+ VL AC+
Sbjct: 216 FNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAG 275
Query: 468 VLEGWWYFDLMQR-IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM-EAGPALWGA 525
+ EG L+ + +Y+ V ++++ + G + + ++ + + + LW
Sbjct: 276 LGEGQQVHLLISKSVYQDRTFVA--SALLNMYSKCGELSIARKIFDDVVISQRDLVLWNG 333
Query: 526 LLSACSTHS 534
+++A + H
Sbjct: 334 MIAAYAHHG 342
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ + E + T++ ++ + AL + E + N TF + C+ +
Sbjct: 216 FNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAG 275
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV--WDLVTWNSMI 230
L EG++VH I K ++ FV ++L++MYS CGE+ ARK+F+D + DLV WN MI
Sbjct: 276 LGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMI 335
Query: 231 DGYVKNREVGFARELFDFM 249
Y + A ELF+ M
Sbjct: 336 AAYAHHGCGMEAIELFEDM 354
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 188/614 (30%), Positives = 329/614 (53%), Gaps = 48/614 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF------F 113
+L+ L+ C +++ Q+H LL G S + +++ C +LS + V F
Sbjct: 6 VLELLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYC-ALSGRAGDVALCHARRMF 64
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
D + +PD F N++++++ P AL + + ++ + + N +T P + K C+ R+
Sbjct: 65 DRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRD-VLRRGILPNEFTLPFVLKACSRARAA 123
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF-EDGPVWDLVTWNSMIDG 232
H +K G+ +FV N+L+H + G + D+R++F E P ++V+WN+MI G
Sbjct: 124 EHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGG 183
Query: 233 YVKNREVGFARELFDFMPER----DIFTW------------------------------- 257
+ E A LF M + D+FT+
Sbjct: 184 CAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVD 243
Query: 258 ----NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
N+++ Y GD+ A+ FD+MP ++VVSW M+ AK G+V +AR+ F++M
Sbjct: 244 LILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPE 303
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RN++SWN +++ YV+ + E L L++RM P+E +L VL+ G + G+ I
Sbjct: 304 RNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMI 363
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H YIQ P V + SL+ MYA+CG +D + ++F M KN +SWN +I MHG+
Sbjct: 364 HCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRA 423
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
++A+ F M +P++ TF+ +LSAC+H G++ +G +YF M+ IY ++P+VEHY C
Sbjct: 424 QEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYAC 483
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGR G + + +L+ +PM+ +WGAL+ AC H + E+GK+ + L+ELE +
Sbjct: 484 MVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGIN 543
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
G +VL+SN+ +W++++ LR++M+++ +K +G S + E VE+
Sbjct: 544 GGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESS 603
Query: 614 CIVYSMLGEIGAQM 627
+Y+ + ++ +
Sbjct: 604 SQIYAAVDQLAYHL 617
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 316/555 (56%), Gaps = 32/555 (5%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H Q+++ GL+ ++ +++ C + + FD I +P+ FM N++++ +
Sbjct: 7 LHAQIILHGLTNETLTLGKLIS-FCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSN 65
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+DP A+ + +M+ + N +T P + K C + E VH +K G +F
Sbjct: 66 SDDPIDAV-LLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVF 124
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V+N+LI +Y VCG + ARK+F+D +T ++ID
Sbjct: 125 VQNALIAVYVVCGLIHCARKLFDD------ITDKTLID---------------------- 156
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
I N+++ Y G++ +A +FD ++VVSW MI YA+ G++ AR FD+M
Sbjct: 157 IIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPG 216
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
+NVVSWN +++ Y+R Y E L LF++M P+EA+L+S+L AC+ +G + +G+ I
Sbjct: 217 KNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKI 276
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H+YI + V L SL+ MYAKCG + A ++F M KN+VSWN +I +HG G
Sbjct: 277 HNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCG 336
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
+A+++F EM+ G P++ T +LSAC+H+G+V G +YFD M IY++ ++EHY C
Sbjct: 337 LEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYAC 396
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGR GL+ ++ EL+ ++PM+ +WGALL AC H N E+GK + + L+ELEP
Sbjct: 397 MVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHS 456
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
G YVL+SNIY +W++V+ +R++M ++ ++K S + E +V++
Sbjct: 457 GGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKIS 516
Query: 614 CIVYSMLGEIGAQMK 628
+Y+ML ++ ++
Sbjct: 517 SSIYAMLDQLTDHLR 531
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 274/479 (57%), Gaps = 38/479 (7%)
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
PL+ K CA + ++ GK +HA +K G + D+ + SL+ MY+ CG V+D+RKVF+ P
Sbjct: 98 PLVLKACASLSIVKHGKALHAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPE 157
Query: 221 WDLVTWNSMIDGYVKNREV-----------------------GFAR--------ELFDFM 249
+ VTWN+MI GY+ N + GFAR FD +
Sbjct: 158 RNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDV 217
Query: 250 PE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
P R++ TW M+ GY +MEAA +F+ MP R+ +W+ MI GY K GNV AR+
Sbjct: 218 PSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSI 277
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FDR+ +RN+V+WN L++ Y + E L F +M +P+E ++ SVL+AC+ +G++
Sbjct: 278 FDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLL 337
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D G+ IH + IK + + L+ MYAKCG + AR +F+ M +N WNSMI G+
Sbjct: 338 DAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSMISGF 397
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+HGQ ++ALE F ME P++ TF+ VLSAC H G V G F M++ Y +
Sbjct: 398 AIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRMEK-YGLTTG 456
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
++HYGC++DLLGRAG ++++ +L+ ++P++ +WGALL AC H + E+ V + ++
Sbjct: 457 IKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDMEMADRVVEEIV 516
Query: 548 ELEPRDPGP----YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASE 602
+++ YVLLSNIYA+ +W++ E +R M K +K G S + PG E
Sbjct: 517 KVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSSIMPGNNTHE 575
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 16/270 (5%)
Query: 84 GLSQDSFAA-SRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALS 142
G+ Q +F A S ++ C +V + FD I + N+++ + AL
Sbjct: 249 GMPQRNFFAWSSMISGYCKK-GNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALE 307
Query: 143 FYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMY 202
+ KM A+ E + T + C+ + L GKK+H + G +L+ FV N L+ MY
Sbjct: 308 -AFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMY 366
Query: 203 SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWN 258
+ CG++ +AR +FE + WNSMI G+ + + A E F M + D T+
Sbjct: 367 AKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFL 426
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVS----WNCMIDGYAKIGNVTSARNCFDRMCMR 314
S++S G + A +F M + + + C+ID + G + A + RM ++
Sbjct: 427 SVLSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVK 486
Query: 315 -NVVSWNILLALYVRCKDYCECLRLFDRMI 343
N V W LL C+ + + + + DR++
Sbjct: 487 PNDVVWGALLGA---CRVHLD-MEMADRVV 512
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 293/523 (56%), Gaps = 9/523 (1%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
VSL+ +FD E DA N ++ +++ A + + + N + G
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNAL---MSGY 203
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
V G + E +++ R+ D+ N ++ Y+ G++++AR++F+ PV D+ T
Sbjct: 204 VQWG--KMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
W +++ GY +N + AR +FD MPER+ +WN+M++ Y+ M+ A LF++MP R+V
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 317
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
SWN M+ GYA+ G + A+ FD M ++ VSW +LA Y + E L+LF M R
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
N ++ VL+ CA++ ++ G +H + + + +LL MY KCG M+ A
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
RN F+ M E++VVSWN+MI GY HG G++ALE+F M P+D T + VL+AC+H+
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V +G YF M + + K EHY CM+DLLGRAG + ++ +L+ +P E +WGA
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL A H N ELG+ A+ + ELEP + G YVLLSNIYAS GKW + +R +M+E+ +
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+K G S + +C K +Y+ L ++ +MK
Sbjct: 618 KKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 660
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 172/369 (46%), Gaps = 53/369 (14%)
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
L+ F I PD + NT++ + + + A + E + V +N +
Sbjct: 87 LAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYN---VMISSHAN 143
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
G+ SL E D N ++ Y G V +AR +F WD ++WN
Sbjct: 144 HGLVSLAR------HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWN 197
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
+++ GYV+ ++ ARELFD MP RD+ +WN M+SGY GDM A LFD P RDV +
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
W ++ GYA+ G + AR FD M RN VSWN ++A Y++ + E LF+ M
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM----- 312
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
C N + W ++LT YA+ G+++ A+
Sbjct: 313 ------------PCRN-----VASW-----------------NTMLTGYAQAGMLEEAKA 338
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT---- 463
VFD M +K+ VSW +M+ Y G E+ L++F+EM + G N + F CVLS C
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 464 -HAGMVLEG 471
GM L G
Sbjct: 399 LECGMQLHG 407
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 148/315 (46%), Gaps = 29/315 (9%)
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
E ++ N I + G V DA ++F P T+N+M+ GY N + A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
+P D +++N+++ + A GLFD MP RD V++N MI +A G V+ AR+
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD ++ VSWN +LA YVR E LF+ DA A LMS M
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNA-LMSGYVQWGKMSEA 212
Query: 368 ----------DIGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMD 403
D+ W + Y ++ + DV T++++ YA+ G+++
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE 272
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD M E+N VSWN+M+ Y ++A E+F M P N A++ +L+
Sbjct: 273 EARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM----PCRNVASWNTMLTGYA 328
Query: 464 HAGMVLEGWWYFDLM 478
AGM+ E FD M
Sbjct: 329 QAGMLEEAKAVFDTM 343
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF 440
R++P+V+ S +T + + G + A +F M ++ ++N+M+ GY +G+ A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 441 MEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGR 500
+ P P++ ++ +L A + + + FD M + V Y M+
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEM----PVRDSVT-YNVMISSHAN 143
Query: 501 AGLMRDSEELVSKLPMEAGPALWGALLSA 529
GL+ + P E W +L+A
Sbjct: 144 HGLVSLARHYFDLAP-EKDAVSWNGMLAA 171
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 334/645 (51%), Gaps = 60/645 (9%)
Query: 37 NEPKPKF------TDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSF 90
N P F TD + + I LS IL+ + S +++ +IHT + G+ D
Sbjct: 136 NHPAKAFDTFERMTDANIEPNRITFLS--ILKACNNYSILEKGRKIHTIVKAMGMETD-V 192
Query: 91 AASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKS---FLMLNDPFGALSFYYEK 147
A + L + + +S++ F + E + I+++ LN+ F YE+
Sbjct: 193 AVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFE----LYEQ 248
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M+ + N TF L C +L G+++H+ I + G E D+ V N+LI MY C
Sbjct: 249 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNS 308
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYV----KNRE-VGFARELFDFMPERDIF----TWN 258
V +AR++F+ D+++W++MI GY K++E + +L + M +F T+
Sbjct: 309 VQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFM 368
Query: 259 SMISG-----------------------------------YVDVGDMEAANGLFDLMPFR 283
S++ Y G + A +F M +
Sbjct: 369 SILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK 428
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+VV+W + Y K G+++SA F M RNVVSWN+++A Y + D + L M
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+P+ +++++L AC + ++ G+ +H+ K ++ D +++TSL+ MY+KCG +
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD M+ ++ V+WN+M+ GYG HG G +A+++F M K +PN+ T V+SAC+
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACS 608
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
AG+V EG F +MQ +K+ P+ +HYGCMVDLLGRAG ++++EE + +P E ++W
Sbjct: 609 RAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVW 668
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
ALL AC +H+N +L + A H++ELEP Y+ LSNIYA G+WD+ +RR+M ++
Sbjct: 669 HALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDR 728
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
L+K G S + + E+C +++ L + +MK
Sbjct: 729 GLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMK 773
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 235/470 (50%), Gaps = 35/470 (7%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N T+ + + CA R +GK VH ++ + G E+D+++ NSLI+ YS +V A +VF
Sbjct: 55 NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDME 271
+ D+VTW+SMI Y N A + F+ M + +I T+ S++ + +E
Sbjct: 115 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILE 174
Query: 272 AANGLFDLMPF----RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
+ ++ DV +I Y+K G ++ A F +M RNVVSW ++
Sbjct: 175 KGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANA 234
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ + E L+++M++ PN + +S+L +C ++ G+ IHS+I + ++ D++
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK-----ALEMFME 442
++ +L+TMY KC + AR +FD M++++V+SW++MI GY G +K ++
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLER 354
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI-YKIEPKVEHYGCMVDLLGRA 501
M + G PN TF+ +L ACT G + +G + ++ ++++ ++ + ++ +
Sbjct: 355 MRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKC 412
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLS---ACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
G + ++E++ SK+ + A W + LS C S++E + E+ R+ +
Sbjct: 413 GSIYEAEQVFSKMANKNVVA-WTSFLSMYIKCGDLSSAE------KVFSEMPTRNVVSWN 465
Query: 559 LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
L+ YA G I+K EL ++ + P +I+E C
Sbjct: 466 LMIAGYAQNGD---------IVKVFELLSSMKAEGFQPDRVTVITILEAC 506
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 205/446 (45%), Gaps = 49/446 (10%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+E C+ + F +H QL G+ D + + ++ + V+ + F + D
Sbjct: 63 IEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLIN-FYSKFEDVASAEQVFRRMTLRD 121
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
++++ ++ N P A +E+M +E N TF + K C L +G+K+H
Sbjct: 122 VVTWSSMIAAYAGNNHPAKAFD-TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH 180
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ G E D+ V +LI MYS CGE+ A +VF ++V+W ++I ++R++
Sbjct: 181 TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLN 240
Query: 241 FARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
A EL++ M + I T+ S+++ + + + R D++ N +I
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC-----KDYCECLRLFDRMIRGDA 347
Y K +V AR FDRM R+V+SW+ ++A Y + + E +L +RM R
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM----- 402
PN+ + MS+L AC G ++ G+ IH+ + K + D L T++ MYAKCG +
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQ 420
Query: 403 ------------------------DL--ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
DL A VF M +NVVSWN MI GY +G K
Sbjct: 421 VFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKV 480
Query: 437 LEMFMEMEKRGPTPNDATFICVLSAC 462
E+ M+ G P+ T I +L AC
Sbjct: 481 FELLSSMKAEGFQPDRVTVITILEAC 506
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 319/549 (58%), Gaps = 25/549 (4%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L+SC+ + + Q+H+ ++ G S + + ++ ++F+D E +
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 121 AFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
F N I+ F+ ++ + F +Y+KM + V + YTFP + + C + E KK+
Sbjct: 78 VFAYNAIISGFV--SNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCC---EVMEVKKI 132
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H ++K G ELD+FV ++L++ Y G + DA+KVF + + D+V WN+MI+GY K +
Sbjct: 133 HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCL 192
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDME---AANGLFDLMPFRDVVSW-NCM 291
A E+F M + + FT ++S + GD++ +G+ M + VS N +
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNAL 252
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
ID Y K ++ A F+ + +++ SWN +++++ +C D+ LRLFD+M+ P+
Sbjct: 253 IDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDL 312
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD--------VLLSTSLLTMYAKCGVMD 403
++ +VL AC+++ + G+ IH Y+ + D +L+S +++ MYAKCG M+
Sbjct: 313 VTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMN 372
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A +FD+M++K+V SWN MIMGYGMHG +AL MF +M + PN+ T + VLSAC
Sbjct: 373 NALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACN 432
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HAG V G + M+ + + P +EHY C++D+LGRAG + D+ E+V K+P++A P +W
Sbjct: 433 HAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVW 492
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
ALL AC H N+EL +I A+ +++LEP G YVL+SN+Y G+++EV +R+ MKE+
Sbjct: 493 RALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQ 552
Query: 584 ELEKAVGSS 592
++K G S
Sbjct: 553 NVKKTPGCS 561
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
N ++ L +CA+ ++ G+ +HS + P TSL+ MY+KCG M A VF
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 410 -DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
D E+NV ++N++I G+ +G K + + +M G P+ TF CV+ C V
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE---V 126
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
+E + ++ +E V +V+ + G M D++++ +L + LW A+++
Sbjct: 127 MEVKKIHGCLLKM-GLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIR-DVVLWNAMIN 184
Query: 529 ACSTHS--NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
+ + L H+ + P +LS ++AS G D + + I+ + +
Sbjct: 185 GYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILS-VFASRGDLDNGKTVHGIVMKMGYD 243
Query: 587 KAVGSS 592
V S
Sbjct: 244 SGVSVS 249
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 261/438 (59%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N++I Y+ G + AR++F++ P D+ TW +M+ GYV+N + A+ FD MP
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E++ ++N+MI+GYV M+ A LF+ MP R++ SWN MI GY +IG++ AR FD
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW ++A Y + Y E L +F + + N A+ L+ CA++ +++G
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ IH K + +LL MY KCG +D A + F+ + EK+VVSWN+M+ GY H
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G G +AL +F M+ G P++ T + VLSAC+H G++ G YF M + Y + P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CM+DLLGRAG + ++++L+ +P + G A WGALL A H N+ELG+ A+ + ++E
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P++ G YVLLSN+YA+ G+W + + +R M++ ++K G S V V +C
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSH 653
Query: 611 HRKCIVYSMLGEIGAQMK 628
K +Y+ L E+ +M+
Sbjct: 654 PEKERIYAYLEELDLKMR 671
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 160/302 (52%), Gaps = 31/302 (10%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E DLF N ++ Y + DAR++F+ P D+V+WNS++ GY +N V ARE+FD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPE++ +WN +++ YV G +E A LF+ D++SWNC++ G+ + + AR F
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDR-----------MIRG------------ 345
D+M +R+ +SWN +++ Y + + RLFD M+ G
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 346 --DAKP--NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
D P NE S +++ +DI + + + CR ++ +++T Y + G
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM-PCR---NISSWNTMITGYGQIGD 343
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+ AR FD M +++ VSW ++I GY G E+AL MF+E+++ G + N ATF C LS
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 462 CT 463
C
Sbjct: 404 CA 405
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 197/428 (46%), Gaps = 48/428 (11%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N I + G A VF P V++N+MI GY++N + AR LFD MP
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ERD+F+WN M++GYV + A LFDLMP +DVVSWN ++ GYA+ G V AR FD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD---------AKPNEASLMSVLTAC 361
M +N +SWN LLA YV E LF+ D + L
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 362 ANMGVIDIGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARN 407
M V D W I Y Q + DV T++++ Y + G++D A+
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
FD M EKN VS+N+MI GY + + A E+F M P N +++ +++ G
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM----PCRNISSWNTMITGYGQIGD 343
Query: 468 VLEGWWYFDLM-QR-------IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
+ + +FD+M QR I + HY +++ + +D E L
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF--VEIKQDGESL--------N 393
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV--LLSNIYASEGKWDEVENLR 577
A +G LS C+ + ELGK + +++ G +V L +Y G DE +
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKM-GYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 578 RIMKEKEL 585
++EK++
Sbjct: 453 EGIEEKDV 460
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE-------H 155
+ ++ + FFD + + D I+ + A S +YE+ + FVE
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGY--------AQSGHYEEALNMFVEIKQDGESL 392
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N TF CA I +L GK++H + VK G+ FV N+L+ MY CG + +A F
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARE---LFDFMP----ERDIFTWNSMISGYVDVG 268
E D+V+WN+M+ GY ++ GF R+ +F+ M + D T ++S G
Sbjct: 453 EGIEEKDVVSWNTMLAGYARH---GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
Query: 269 DMEAANGLF-----DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNIL 322
++ F D + CMID + G + A++ M + SW L
Sbjct: 510 LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGAL 569
Query: 323 LA 324
L
Sbjct: 570 LG 571
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
+ G++ G YF M Y + P +HY CM+DLLGR + +
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
GALL A H N+ELG+ AQ ++ P++ G
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG 850
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 378 QKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
K R+K PD+L ++ + + G D A +VF+ M ++ VS+N+MI GY + + A
Sbjct: 40 NKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLA 99
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+F +M +R + + C + + FDLM E V + ++
Sbjct: 100 RNLFDQMPERDLFSWNVMLTGYVRNCR----LGDARRLFDLMP-----EKDVVSWNSLLS 150
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ G + ++ E+ +P E W LL+A
Sbjct: 151 GYAQNGYVDEAREVFDNMP-EKNSISWNGLLAA 182
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 271/450 (60%), Gaps = 8/450 (1%)
Query: 147 KMMAKFVEHNH--YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ + E NH YT L G + AG + E +++ + + D+ +++ Y
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAG--RVNEARRLFDEMP----DRDVVAWTAMLSGYCQ 186
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G + +AR +F++ P ++V+W +MI GY +N EV AR+LF+ MPER+ +W +M+ GY
Sbjct: 187 AGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGY 246
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ G +E A LF+ MP V + N M+ G+ + G V +A+ F++M R+ +W+ ++
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIK 306
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y + + E L F M+ +PN S++S+LT CA + V+D G+ +H+ + +C
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
DV ++L+TMY KCG +D A+ VF K++V WNSMI GY HG GE+AL +F +M
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
G +P+ T+I L+AC++ G V EG F+ M I P EHY CMVDLLGR+GL+
Sbjct: 427 LAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLV 486
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ +L+ +P+E +WGAL+ AC H N+E+ ++ A+ L+ELEP + GPYVLLS+IY
Sbjct: 487 EEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIY 546
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
S G+W++ +R+ + + L K+ G S +
Sbjct: 547 TSVGRWEDASKMRKFISSRNLNKSPGCSWI 576
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 12/276 (4%)
Query: 191 DLFVRNSLIHMYSVCGEVL-DARKVFEDGPVW-DLVTWNSMIDGYVKNREVGFARELFDF 248
DL N+LI S+ + L DA P +V++ S++ GYV++ + A LF
Sbjct: 78 DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+ ++ ++ G +D G + A LFD MP RDVV+W M+ GY + G +T AR F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG-VI 367
D M RNVVSW +++ Y + + +LF+ M + NE S ++L G V
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVM----PERNEVSWTAMLVGYIQAGHVE 253
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D + ++ + V +++ + + G++D A+ VF+ M E++ +W++MI Y
Sbjct: 254 DAAELFNAMPEH-----PVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAY 308
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
+ +AL F EM RG PN + I +L+ C
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCA 344
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 20/305 (6%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
N+ I + + AR F+ MP R ++N++++GY +AA GLF MP RD+
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 287 SWNCMIDGYA-KIGNVTSARNCFDRMCM-RNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
S+N +I G + + + A + +VVS+ LL YVR + +RLF +M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ N S +L + G ++ + + + DV+ T++L+ Y + G +
Sbjct: 139 --PERNHVSYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR +FD M ++NVVSW +MI GY +G+ A ++F M +R N+ ++ +L
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQ 248
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG V + F+ M E V M+ G+ G++ ++ + K+ E W
Sbjct: 249 AGHVEDAAELFNAMP-----EHPVAACNAMMVGFGQRGMVDAAKTVFEKM-RERDDGTWS 302
Query: 525 ALLSA 529
A++ A
Sbjct: 303 AMIKA 307
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ ++E D + ++K++ ALS + E M+ + V N+ + + VCA +
Sbjct: 290 FEKMRERDDGTWSAMIKAYEQNEFLMEALSTFRE-MLWRGVRPNYPSVISILTVCAALAV 348
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G++VHA +++C F++D+F ++LI MY CG + A++VF D+V WNSMI G
Sbjct: 349 LDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITG 408
Query: 233 YVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
Y ++ + +G ++ D T+ ++ G ++ +F+ M +
Sbjct: 409 YAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRP 468
Query: 288 ----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
++CM+D + G V A + M + + V W L+
Sbjct: 469 GAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMG 510
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 296/539 (54%), Gaps = 40/539 (7%)
Query: 88 DSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEK 147
D + S V+K S S+ + F+ IQ P + N ++ + P A+ FY
Sbjct: 4 DPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFY-NT 62
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M K ++ +H TF L K CA + +R+G+ V +K GFE FV N+LIHMY GE
Sbjct: 63 MYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGE 122
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD-------------------- 247
+ A+KVF+ D+V+WNS+I GY + +LF
Sbjct: 123 LAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISA 182
Query: 248 --FMPE-----------------RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
F+ E D++ N++I Y G ++ A +F M +++VSW
Sbjct: 183 TCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSW 242
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N MI GYAK+GN+ +A+ F+ M R+V+SW ++ Y K + E ++LF M+ K
Sbjct: 243 NAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVK 302
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+E ++ + L+ACA++G +D G+ +H YI+K IK DV + SL+ MY KCGV++ A V
Sbjct: 303 PDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQV 362
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F++M ++ VSW S+I G ++G E AL +F +M K G P TF+ VL AC H G+V
Sbjct: 363 FNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLV 422
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
+G +F M+ Y++ P+++HYGC+VDLL R+G + + + K+P+ +W LLS
Sbjct: 423 DKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLS 482
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H N L +IV++ L+ L+P + G YVL S+ YA +WD+V +R++M+ L+K
Sbjct: 483 ACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQK 541
>gi|296082839|emb|CBI22140.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 272/422 (64%), Gaps = 6/422 (1%)
Query: 176 GKKVHARIVKCGFELD---LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
G +H ++ K GF ++V +L+ Y G++ ARK+F++ ++V+WNSM+ G
Sbjct: 3 GISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAG 62
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
Y+K ++ A LF MPER+ +WN+MISG+V+ GD+++A FD MP ++ VSW MI
Sbjct: 63 YLKAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMI 122
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG--DAKPN 350
GY+K G+V SA FD++ ++++ +N ++A Y + E L LF+ M+ + +P+
Sbjct: 123 SGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPD 182
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
E +L SV++AC+ +G + G WI SY+++ I+ D L+T+LL +YAKCG +D A +F
Sbjct: 183 EMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFH 242
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+ +K++V++ +MI+G G++G+ A+++F EM PN TFI +L+A HAG+V E
Sbjct: 243 GLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEE 302
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G+ F M++ Y + P V+HYG MVDL GRAG ++++ EL+ +PM+ +WGALL AC
Sbjct: 303 GYRCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLAC 361
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H+N E G+I AQH ELEP G LLSNIYAS +WD+V+ LR++ KEK K G
Sbjct: 362 RLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPG 421
Query: 591 SS 592
S
Sbjct: 422 CS 423
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 12/223 (5%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV--EHNHYTFPLLGKVCAG 169
FD + D + N ++ + + P AL+ + M+ +V + + T + C+
Sbjct: 137 LFDQVGGKDLLLFNAMIACYAQNSRPNEALNLF-NNMLNPYVNVQPDEMTLASVISACSQ 195
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ LR G + + + + G E+D + +L+ +Y+ CG + A ++F DLV + +M
Sbjct: 196 LGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAM 255
Query: 230 IDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
I G N + A +LFD M + IF T+ +++ Y G +E F M ++
Sbjct: 256 ILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNL 315
Query: 286 V----SWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILL 323
V + M+D + + G + A M M+ + W LL
Sbjct: 316 VPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALL 358
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 248/400 (62%), Gaps = 2/400 (0%)
Query: 198 LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTW 257
L M + G + A KVF + ++V W SMI+GY+ N+++ AR FD PERDI W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
N+MISGY+++G+M A LFD MP RDV+SWN +++GYA IG++ + FD M RNV
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 318 SWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
SWN L+ Y + E L F RM+ G PN+A++ VL+ACA +G D G+W+H Y
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 377 IQKCRI-KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ K DV + +L+ MY KCG +++A VF + ++++SWN+MI G HG G +
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL +F EM+ G +P+ TF+ VL AC H G+V +G YF+ M + I P++EH GC+V
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLL RAG + + E ++K+P++A +W LL A + ++G++ + L++LEPR+P
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPA 393
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+V+LSNIY G++D+ L+ M++ +K G S +
Sbjct: 394 NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE 433
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 19/227 (8%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + F N ++K + L + + V N T L+ CA + +
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 173 LREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
GK VH G+ ++D+ V+N+LI MY CG + A +VF+ DL++WN+MI+
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL---------FD 278
G + A LF M I T+ ++ +G +E +GL F
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVE--DGLAYFNSMFTDFS 321
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+MP ++ C++D ++ G +T A ++M ++ + V W LL
Sbjct: 322 IMP--EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 205/652 (31%), Positives = 330/652 (50%), Gaps = 81/652 (12%)
Query: 57 SHPILQKLESCSTVK----EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
S P + L+SC K +H ++ SG S + F +R++ + S+
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY-SKCGSLEDGRQV 77
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH------- 155
FD + + + + N+++ L A S + + M++ F +H
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 156 -------------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMY 202
N Y+F + C+G+ + +G +VH+ I K F D+++ ++L+ MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 203 SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE----------- 251
S CG V DA++VF++ ++V+WNS+I + +N A ++F M E
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 252 -----------------------------RDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
DI N+ + Y ++ A +FD MP
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
R+V++ MI GYA + +AR F +M RNVVSWN L+A Y + + E L LF +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMY 396
R P S ++L ACA++ + +G H ++ K K D+ + SL+ MY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
KCG ++ VF M E++ VSWN+MI+G+ +G G +ALE+F EM + G P+ T I
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSAC HAG V EG YF M R + + P +HY CMVDLLGRAG + +++ ++ ++PM
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
+ +WG+LL+AC H N LGK VA+ L+E+EP + GPYVLLSN+YA GKW++V N+
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
R+ M+++ + K G S + +V++ RK ++S+L + A+M+
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 293/523 (56%), Gaps = 9/523 (1%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
VSL+ +FD E DA N ++ +++ A + + + N + G
Sbjct: 22 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNAL---MSGY 78
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
V G + E +++ R+ D+ N ++ Y+ G++++AR++F+ PV D+ T
Sbjct: 79 VQWG--KMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 132
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
W +++ GY +N + AR +FD MPER+ +WN+M++ Y+ M+ A LF++MP R+V
Sbjct: 133 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 192
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
SWN M+ GYA+ G + A+ FD M ++ VSW +LA Y + E L+LF M R
Sbjct: 193 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 252
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
N ++ VL+ CA++ ++ G +H + + + +LL MY KCG M+ A
Sbjct: 253 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 312
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
RN F+ M E++VVSWN+MI GY HG G++ALE+F M P+D T + VL+AC+H+
Sbjct: 313 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 372
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V +G YF M + + K EHY CM+DLLGRAG + ++ +L+ +P E +WGA
Sbjct: 373 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 432
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL A H N ELG+ A+ + ELEP + G YVLLSNIYAS GKW + +R +M+E+ +
Sbjct: 433 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 492
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+K G S + +C K +Y+ L ++ +MK
Sbjct: 493 KKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMK 535
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 157/286 (54%), Gaps = 13/286 (4%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N +I ++ G V AR F+ P D V+WN M+ YV+N V AR LF+
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E D+ +WN+++SGYV G M A LFD MP RDVVSWN M+ GYA+ G++ AR FD
Sbjct: 65 EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA 124
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+R+V +W +++ Y + E R+FD M + N S +++ A ++D
Sbjct: 125 APVRDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEA 180
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ + + + CR +V ++LT YA+ G+++ A+ VFD M +K+ VSW +M+ Y
Sbjct: 181 KELFN-MMPCR---NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQG 236
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACT-----HAGMVLEG 471
G E+ L++F+EM + G N + F CVLS C GM L G
Sbjct: 237 GCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHG 282
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
MP RD V++N MI +A G V+ AR+ FD ++ VSWN +LA YVR E LF
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVI----------DIGQW---IHSYIQKCRIKP-- 384
+ D A LMS M D+ W + Y ++ +
Sbjct: 61 NSRTEWDVISWNA-LMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEAR 119
Query: 385 ---------DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
DV T++++ YA+ G+++ AR VFD M E+N VSWN+M+ Y ++
Sbjct: 120 RLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDE 179
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
A E+F M P N A++ +L+ AGM+ E FD M
Sbjct: 180 AKELFNMM----PCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 218
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 317/583 (54%), Gaps = 48/583 (8%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L I + L S +T + H++H+ ++ GL +++++ K S +F
Sbjct: 15 LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFG-ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ ++ N+I+++ L N F ALS Y E + ++ + YTFP + CAG+
Sbjct: 75 SPSNNVYLWNSIIRA-LTHNGLFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFE 132
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
K +H R++ GF DL++ N+LI MY ++ ARKVFE+ P+ D+V+WNS+I GY
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 235 KNR-----------------------------------------EVGFARELFDFMP--- 250
N ++ F + + D+M
Sbjct: 193 ANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 252
Query: 251 -ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
E D N +I+ Y G++ A+ +F M +D VSWN MI+ Y + G + + F+
Sbjct: 253 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFE 312
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
M R++++WN ++A V +D LR+ RM P+ A+++S+L C+ +
Sbjct: 313 NMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 372
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G+ IH I K ++ DV + L+ MY+KCG + + VF M K+VV+W ++I GM
Sbjct: 373 GKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGM 432
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
+G+G+KA+ F EME G P+ F+ ++ AC+H+G+V EG YF M++ YKIEP++E
Sbjct: 433 YGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIE 492
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HY C+VDLL R+ L+ +E+ + +P++ ++WGALLSAC ++E+ + V++ ++EL
Sbjct: 493 HYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIEL 552
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
P D G YVL+SNIYA+ GKWD+V ++R+ +K + L+K G S
Sbjct: 553 NPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCS 595
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 209/470 (44%), Gaps = 64/470 (13%)
Query: 46 TDNQRLPIVDLSHPILQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTS 102
++ QR+ + ++ + +C+ + +F IH ++L G D + + ++ C
Sbjct: 104 SETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYC-R 162
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKM-----MAKFVEHNH 157
+ + + F+ + D N+++ + AL YY+ + M + +
Sbjct: 163 FNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDL 222
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
T + + C + L GK VH ++ G+E D N LI+MY+ CG +L +++VF
Sbjct: 223 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 282
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV------------ 265
D V+WNSMI+ Y++N ++G + ++F+ M RDI TWN++I+ V
Sbjct: 283 MKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMI 342
Query: 266 ----------DVGDM-----------------EAANGLFDLMPFRDVVSWNCMIDGYAKI 298
D+ M E +F L DV N +I+ Y+K
Sbjct: 343 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 402
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE---CLRLFDRMIRGDAKPNEASLM 355
G++ ++ F M ++VV+W L++ C Y E +R F M P+ + +
Sbjct: 403 GSLRNSFQVFKLMKTKDVVTWTALIS---ACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 459
Query: 356 SVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+++ AC++ G+++ G + H + +I+P + ++ + ++ ++D A + +M
Sbjct: 460 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 519
Query: 415 KNVVS-WNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
K S W +++ M G E+ E +E+ P+D + ++S
Sbjct: 520 KPDSSIWGALLSACRMSGDTEIAERVSERIIEL-----NPDDTGYYVLVS 564
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/587 (36%), Positives = 316/587 (53%), Gaps = 48/587 (8%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFD 114
++HPIL +ESC+++ + QI + + L +F SRVL S S ++ + L F
Sbjct: 49 ITHPILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHLLFS 108
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+Q P+ ++ NT+++ + G F ++ +M+ K VE + +F K C +
Sbjct: 109 QLQNPNTYIWNTMIRGYS--KAKMGQTGFLFFCQMVQKGVEMDCRSFVFALKACEQFLGV 166
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
EGK VH + K GF L V+N L+H Y + G +
Sbjct: 167 LEGKSVHCVVWKMGFVYTLLVQNGLVHFYGLRGCL------------------------- 201
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN---- 289
G AR +FD + ERD+ +W SMI GY + A LFD M VV N
Sbjct: 202 ------GLARLVFDEISERDVVSWTSMIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTM 255
Query: 290 -CMIDGYAKIGNVTSARNCFDRMCMRNVVS----WNILLALYVRCKDYCECLRLFDRMIR 344
++ ++ G++ + + + RNV N +L +YV+C +FD M
Sbjct: 256 IAVLSSCSQKGDLILGKTFLEYVKTRNVTRSLNLMNAILDMYVKCGCLDSAREIFDTMGA 315
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
A P E +L VL C +G +D+GQWIH +Y++ + V+L+ +L+ MYAKCGV+
Sbjct: 316 AFA-PMENTLACVLPVCGQLGCLDVGQWIHRNYVRMRYNEISVILANALIDMYAKCGVIH 374
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A VF++M E+N+VSWNSMI Y HG ++AL +F M G P+D T + VLSAC+
Sbjct: 375 EAAKVFNDMPERNLVSWNSMITAYASHGHAKQALSVFERMISGGFKPDDITLVGVLSACS 434
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V EG YF M+R Y IEPK EHY CM+DLLGR GL+ D+ EL++K+PME A W
Sbjct: 435 HGGLVAEGQEYFQNMKRKYGIEPKNEHYACMIDLLGRVGLLEDAYELITKMPMEPSAAAW 494
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GAL+ AC H N E+ KI A L+EL+P D G YVLL+NI AS +W +V+ RR+M+E+
Sbjct: 495 GALVHACRMHGNVEVAKIAAPRLLELDPEDSGIYVLLANICASGRRWGDVKMARRMMRER 554
Query: 584 ELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
++K G S+V G+F + P + I Y+ L ++ A K+
Sbjct: 555 RVKKIPGRSIVEVEGQFHEFLAGDESHPQSEGI-YNALDQLFAMSKL 600
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 261/438 (59%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N++I Y+ G + AR++F++ P D+ TW +M+ GYV+N + A+ FD MP
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E++ ++N+MI+GYV M+ A LF+ MP R++ SWN MI GY +IG++ AR FD
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW ++A Y + Y E L +F + + N A+ L+ CA++ +++G
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ IH K + +LL MY KCG +D A + F+ + EK+VVSWN+M+ GY H
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G G +AL +F M+ G P++ T + VLSAC+H G++ G YF M + Y + P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CM+DLLGRAG + ++++L+ +P + G A WGALL A H N+ELG+ A+ + ++E
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P++ G YVLLSN+YA+ G+W + + +R M++ ++K G S V V +C
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSH 653
Query: 611 HRKCIVYSMLGEIGAQMK 628
K +Y+ L E+ +M+
Sbjct: 654 PEKERIYAYLEELDLKMR 671
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 160/302 (52%), Gaps = 31/302 (10%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E DLF N ++ Y + DAR++F+ P D+V+WNS++ GY +N V ARE+FD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPE++ +WN +++ YV G +E A LF+ D++SWNC++ G+ + + AR F
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDR-----------MIRG------------ 345
D+M +R+ +SWN +++ Y + + RLFD M+ G
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 346 --DAKP--NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
D P NE S +++ +DI + + + CR ++ +++T Y + G
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM-PCR---NISSWNTMITGYGQIGD 343
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+ AR FD M +++ VSW ++I GY G E+AL MF+E+++ G + N ATF C LS
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 462 CT 463
C
Sbjct: 404 CA 405
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 197/428 (46%), Gaps = 48/428 (11%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N I + G A VF P V++N+MI GY++N + AR LFD MP
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ERD+F+WN M++GYV + A LFDLMP +DVVSWN ++ GYA+ G V AR FD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD---------AKPNEASLMSVLTAC 361
M +N +SWN LLA YV E LF+ D + L
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 362 ANMGVIDIGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARN 407
M V D W I Y Q + DV T++++ Y + G++D A+
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
FD M EKN VS+N+MI GY + + A E+F M P N +++ +++ G
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM----PCRNISSWNTMITGYGQIGD 343
Query: 468 VLEGWWYFDLM-QR-------IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
+ + +FD+M QR I + HY +++ + +D E L
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF--VEIKQDGESL--------N 393
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV--LLSNIYASEGKWDEVENLR 577
A +G LS C+ + ELGK + +++ G +V L +Y G DE +
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKM-GYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 578 RIMKEKEL 585
++EK++
Sbjct: 453 EGIEEKDV 460
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE-------H 155
+ ++ + FFD + + D I+ + A S +YE+ + FVE
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGY--------AQSGHYEEALNMFVEIKQDGESL 392
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N TF CA I +L GK++H + VK G+ FV N+L+ MY CG + +A F
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARE---LFDFMP----ERDIFTWNSMISGYVDVG 268
E D+V+WN+M+ GY ++ GF R+ +F+ M + D T ++S G
Sbjct: 453 EGIEEKDVVSWNTMLAGYARH---GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
Query: 269 DMEAANGLF-----DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNIL 322
++ F D + CMID + G + A++ M + SW L
Sbjct: 510 LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGAL 569
Query: 323 LA 324
L
Sbjct: 570 LG 571
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 378 QKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
K R+K PD+L ++ + + G D A +VF+ M ++ VS+N+MI GY + + A
Sbjct: 40 NKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLA 99
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+F +M +R + + C + + FDLM E V + ++
Sbjct: 100 RNLFDQMPERDLFSWNVMLTGYVRNCR----LGDARRLFDLMP-----EKDVVSWNSLLS 150
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ G + ++ E+ +P E W LL+A
Sbjct: 151 GYAQNGYVDEAREVFDNMP-EKNSISWNGLLAA 182
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 311/558 (55%), Gaps = 18/558 (3%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+K Q++ QL+VSGL + F + + C V+ + F + EPD + N I+K
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINA-CLHFGDVNYAHKAFREVSEPDILLWNAIIK 73
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+ N + Y + +++ V N +TF + K C G GK++H + K GF
Sbjct: 74 GYTQKNIVDAPIRMYMDMQISQ-VHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG 132
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
++FV+NSL+ MY+ G++ AR VF+ +V+W S+I GYV+N + A +F M
Sbjct: 133 SNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM 192
Query: 250 PE----RDIFTWNSMISGYVDVGDMEAANGLFDL-----MPFRD--VVSWNCMIDGYAKI 298
+ D S+++ Y +V D+ + L + F V+S M YAK
Sbjct: 193 RQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKR 249
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G V AR F+RM N++ WN +++ Y E ++LF MI + + + ++ S +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
A A +G +++ +W+ YI K + D ++T L+ MYAKCG + LAR VFD + +K+VV
Sbjct: 310 LASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 369
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
W+ MIMGYG+HG G++A+ ++ EM++ G PND TFI +L+AC ++G+V EGW F LM
Sbjct: 370 LWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 429
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ IEP +HY C+VDLLGRAG + + + + +P++ G ++WGALLSAC H L
Sbjct: 430 PD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRL 488
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPG 597
G+I A+ L L+P + G YV LSN+YAS W V N+R +M +K L K +G SS+ G
Sbjct: 489 GEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEING 548
Query: 598 EFASESIVENCPPHRKCI 615
+ + + P K I
Sbjct: 549 NLETFQVGDRSHPKSKEI 566
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 310/557 (55%), Gaps = 18/557 (3%)
Query: 71 KEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKS 130
K Q++ QL+VSGL + F + + C V+ + F + EPD + N I+K
Sbjct: 1 KHLDQVYVQLIVSGLHKCRFLMIKFINA-CLHFGDVNYAHKAFREVSEPDILLWNAIIKG 59
Query: 131 FLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL 190
+ N + Y + +++ V N +TF + K C G GK++H + K GF
Sbjct: 60 YTQKNIVDAPIRMYMDMQISQ-VHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGS 118
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
++FV+NSL+ MY+ G++ AR VF+ +V+W S+I GYV+N + A +F M
Sbjct: 119 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 178
Query: 251 E----RDIFTWNSMISGYVDVGDMEAANGLFDL-----MPFRD--VVSWNCMIDGYAKIG 299
+ D S+++ Y +V D+ + L + F V+S M YAK G
Sbjct: 179 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKRG 235
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V AR F+RM N++ WN +++ Y E ++LF MI + + + ++ S +
Sbjct: 236 LVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVL 295
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A A +G +++ +W+ YI K + D ++T L+ MYAKCG + LAR VFD + +K+VV
Sbjct: 296 ASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVL 355
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W+ MIMGYG+HG G++A+ ++ EM++ G PND TFI +L+AC ++G+V EGW F LM
Sbjct: 356 WSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 415
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ IEP +HY C+VDLLGRAG + + + + +P++ G ++WGALLSAC H LG
Sbjct: 416 D-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 474
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGE 598
+I A+ L L+P + G YV LSN+YAS W V N+R +M +K L K +G SS+ G
Sbjct: 475 EIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGN 534
Query: 599 FASESIVENCPPHRKCI 615
+ + + P K I
Sbjct: 535 LETFQVGDRSHPKSKEI 551
>gi|359486281|ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/512 (37%), Positives = 297/512 (58%), Gaps = 35/512 (6%)
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
++ ++F+ N I+KSF DP + M+ V + ++F L+ K C+ + ++EG
Sbjct: 77 KQDNSFIWNAIIKSFSHKEDPREVFVIF-NLMLESGVCVDKFSFSLVLKACSRLGLIKEG 135
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
++H + K D+F++N L+ +Y CG + R++F+ D V++NSMIDGYVK+
Sbjct: 136 MQIHGLLGKMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRMMKKDSVSFNSMIDGYVKH 195
Query: 237 REVGFARELFDFMP----------------------------------ERDIFTWNSMIS 262
V A ELFD MP ++D+ +WNSMI+
Sbjct: 196 GMVKSAWELFDVMPMEQKILISWNSMISEYARSEERLKVAWELFEEMPKKDLISWNSMIN 255
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
G V G ME + LF+ MP R VVS M++G+AK+G + AR F M +V+S N +
Sbjct: 256 GCVKCGKMENDHHLFNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAM 315
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+A YV+ E L+ F M+ + + A+L+ L+A A +G D G +H YI+
Sbjct: 316 MARYVQNGYLMESLKNFHDMLSKELFLDNATLLITLSAIAQLGHFDEGVALHCYIEDNGF 375
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
L +L+ YAKCG +D A +VF+++ K++ WN+++ G +HG GE A E+FME
Sbjct: 376 SLSEKLGVALIDTYAKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGEVAFELFME 435
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
MEK PND TFI VL+AC HAG+V EG F+LM+R+ K+EPK++HY CMVD+LG+AG
Sbjct: 436 MEKLFVKPNDITFIGVLNACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCMVDILGQAG 495
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSN 562
+ ++++ V K+ +E +W LLSAC H N +G+ VA+HL+ ++ + YVLLSN
Sbjct: 496 HVEETKKFVEKMSIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNLSSYVLLSN 555
Query: 563 IYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
IYA G W++V +R +MK+++L+K G S +
Sbjct: 556 IYAGFGIWNDVHRIRMMMKQRDLKKIPGCSQI 587
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 282/535 (52%), Gaps = 32/535 (5%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEP 119
L C +++ QI + + L+ + ++L +L S+ + F I+ P
Sbjct: 9 LALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNP 68
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D FM NT+++ + P AL + E + ++F L K A R+L G ++
Sbjct: 69 DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQL 128
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H V G + LFV +LI MY+ C ++
Sbjct: 129 HCLAVGYGLDSHLFVGTTLISMYAECACLV------------------------------ 158
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
FAR++FD M E +I WN++++ ++ A +F MP R++ SWN M+ GY K G
Sbjct: 159 -FARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAG 217
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR F +M +++ VSW+ ++ + ++ + F + R +PNE SL VL+
Sbjct: 218 ELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLS 277
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA G + G+ +H +++K + ++ +L+ Y+KCG +D+AR VFDNM ++ VS
Sbjct: 278 ACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVS 337
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W +MI G MHG GE+A+ +F EME+ P+ TFI +L AC+HAG+V G YF M
Sbjct: 338 WTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMV 397
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y IEP +EHYGCMVDL GRAG ++ + + V ++P+ +W LL ACS H N L
Sbjct: 398 NTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLA 457
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
V + L EL+P + G +VLLSNIYA GKW +V LRR M + L+K G S++
Sbjct: 458 GQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMI 512
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 295/525 (56%), Gaps = 39/525 (7%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
S + L+F F+ N ++++ P A + + ++ + +TFP L K
Sbjct: 28 TSAASLYFPLFPSSCTFLHNLLIRASATSPSPRLAFA-AFSSILRSGDTPDRFTFPSLLK 86
Query: 166 VCAGIRSL-REGKKVHARIVKCGFELDLFVRNSLIHMYSV-------------------- 204
+ + S R G +VHA+ V+ G +D+FV N+L+ MY+
Sbjct: 87 SASRLASFPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADL 146
Query: 205 ------------CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE- 251
CGE+ +AR+VFE P + V+W++M+ Y E+ ARE+FD MP
Sbjct: 147 VTWNTMLGGYVKCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFDEMPAI 206
Query: 252 -RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
R++ +WNSMI+G+ G + A +FD MP R++VSWN M+ GYA G + AR FDR
Sbjct: 207 GRNVVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDR 266
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDI 369
M ++VVSW +++ Y + + Y E L LF M + PNE +++SVL+ACA++ ++
Sbjct: 267 MPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEE 326
Query: 370 GQWIHSYIQKCRIKPD--VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+W H++I K ++ D L +L+ MY+KCG DLA +F ++ +KNV +WN++I G
Sbjct: 327 GRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQKNVSAWNALITGL 386
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
++G ++++F +M + G PN TF+ VL+AC H G+V EG F M ++P+
Sbjct: 387 AVNGDVRSSIDVFEQMRRSGEKPNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPE 446
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+HYGCMVD+LGRAGL+ ++EEL+ +PM + GALL AC H ++ V ++
Sbjct: 447 AKHYGCMVDMLGRAGLLEEAEELIRSMPMVPDVMILGALLGACRMHKRVDVAARVQNEIL 506
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
L + G +VL+S+IYA+ GKW + R ++++ + K GSS
Sbjct: 507 GLSTQQSGCHVLISDIYAAAGKWADALYARGVLQKFGISKLRGSS 551
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 23/273 (8%)
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVI-DIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
F ++R P+ + S+L + + + G +H+ + + DV + +LL MYA
Sbjct: 66 FSSILRSGDTPDRFTFPSLLKSASRLASFPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYA 125
Query: 398 KCGVMDLARNVFDNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
R VFD+ ++V+WN+M+ GY G+ +A +F +M +R N ++
Sbjct: 126 AFRDTRSMREVFDSCAGVADLVTWNTMLGGYVKCGEIGEARRVFEQMPQR----NGVSWS 181
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
++ A AG + FD M I + V + M+ R GL+ + ++ ++P+
Sbjct: 182 AMVGAYAGAGELDVAREMFDEMPAIGR---NVVSWNSMITGFARHGLLPLARKMFDEMPV 238
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEP-RDPGPYVLLSNIYASEGKWDEVEN 575
W ++ + N E+ A+ L + P +D + + + YA + E
Sbjct: 239 R-NLVSWNTMVRGYAV--NGEMND--ARELFDRMPEKDVVSWTCMISGYAQARCYTETLE 293
Query: 576 LRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
L R M+ + S V P E S++ C
Sbjct: 294 LFRAMQSE--------SNVLPNEVTMVSVLSAC 318
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 276/501 (55%), Gaps = 46/501 (9%)
Query: 120 DAFMCNTIMK----SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ F+ NT+++ + L+ DP L +Y + + A + H TF L K + ++E
Sbjct: 53 NVFVWNTMIRKQVENGLITRDP--PLLYYMQGLRAGLRPNGH-TFMYLLKALVSGQEVKE 109
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV- 234
G++VHA +V+ GF FV +L+ Y CG V R+VF++ LV W +I YV
Sbjct: 110 GEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVC 169
Query: 235 ------------KNREVGF----------------------ARELFDFMP----ERDIFT 256
REVG A+ + F+ E D F
Sbjct: 170 VTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFV 229
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
+++IS Y + G ++ A F P +++V WN MI + N+ + F M R+V
Sbjct: 230 SSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDV 289
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSWN ++ + R Y E L F M PN +L+S L+ACA+ G +D G WIH+Y
Sbjct: 290 VSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAY 349
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ K + D L +SL+ MY+KCG +D A +F+ T +++ +W S++ G MHG+GEKA
Sbjct: 350 VDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKA 409
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L F +M++ P+D T + VLSAC HAG++ +GWWYF M++++ + PKVEHYG MVD
Sbjct: 410 LHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVD 469
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGR G ++++ +L+ +PMEA +WGA LSAC H+N ELG++ A+ L+ L PRDP
Sbjct: 470 LLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWA 529
Query: 557 YVLLSNIYASEGKWDEVENLR 577
V+LSN+YA E KWD LR
Sbjct: 530 RVMLSNMYAEEAKWDRSMGLR 550
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 194/436 (44%), Gaps = 52/436 (11%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ L S VKE ++H ++ +G + F + +L + V FD +++P
Sbjct: 97 LLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLG-FYVACGLVGKGRQVFDEMRQP 155
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ I+++++ + P AL + M + + + C + L K +
Sbjct: 156 GLVLWTLIIRAYVCVTFPEKALELF-RTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAM 214
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H I K G E+D FV ++LI Y CG + A + F++ P+ ++V WN+MI V++ +
Sbjct: 215 HCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNL 274
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR---------------- 283
++LF MP+RD+ +WNSMI G+ +G + A F M F
Sbjct: 275 ELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSAC 334
Query: 284 ------DVVSW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
D +W + +ID Y+K G++ A F+ R++ +W
Sbjct: 335 ASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWT 394
Query: 321 IL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
+ LA++ R + + L F +M +P++ +++ VL+ACA+ G++D G W +
Sbjct: 395 SIVCGLAMHGRGE---KALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSM 451
Query: 378 QKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ--- 432
+K + P V ++ + + G + A ++ M E N + W + + +H
Sbjct: 452 EKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVEL 511
Query: 433 GEKALEMFMEMEKRGP 448
GE A + + R P
Sbjct: 512 GEVAARRLLGLXPRDP 527
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 113/267 (42%), Gaps = 11/267 (4%)
Query: 310 RMCMRNVVSWNILLALYVR----CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
R+ NV WN ++ V +D L + + +R +PN + M +L A +
Sbjct: 48 RLDCANVFVWNTMIRKQVENGLITRD--PPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQ 105
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+ +H+ + + +S +LL Y CG++ R VFD M + +V W +I
Sbjct: 106 EVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIR 165
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
Y EKALE+F M + G TP+ V+SAC G + +++ IE
Sbjct: 166 AYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEK-SGIE 224
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
++ G G + + + PM+ +W ++ H+N ELGK Q
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGK---QL 280
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDE 572
+ RD + + +A G++ E
Sbjct: 281 FQSMPDRDVVSWNSMIGGFARIGQYQE 307
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/564 (35%), Positives = 304/564 (53%), Gaps = 19/564 (3%)
Query: 41 PKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC 100
PKF +Q + DL H +L ++K QIH+QL+ + + S A L L
Sbjct: 89 PKF----HQFSSVPDLKH-LLNNAAKLKSLKHATQIHSQLVTTN-NHASLANINTLLLLY 142
Query: 101 TSLSSVSLSVLFFDGIQEP--DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
S+ ++L F+ P + T++ N PF AL+F+ +M + NH+
Sbjct: 143 AKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFF-NRMRTTGIYPNHF 201
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF + CA L EG+++HA I K F D FV +L+ MY+ CG +L A VF++
Sbjct: 202 TFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEM 261
Query: 219 PVWDLVTWNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
P +LV+WNSMI G+VKN R +G RE+ P D + +S++S + +++
Sbjct: 262 PHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGP--DQVSISSVLSACAGLVELDFGK 319
Query: 275 GLFDLMPFRDVVSW----NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ + R +V N ++D Y K G A F R+VV+WN+++ RC+
Sbjct: 320 QVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCR 379
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
++ + F MIR +P+EAS S+ A A++ + G IHS++ K + +S+
Sbjct: 380 NFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISS 439
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
SL+TMY KCG M A VF E NVV W +MI + HG +A+++F EM G P
Sbjct: 440 SLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVP 499
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
TF+ VLSAC+H G + +G+ YF+ M ++ I+P +EHY CMVDLLGR G + ++
Sbjct: 500 EYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRF 559
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ +P E +WGALL AC H+N E+G+ VA+ L +LEP +PG Y+LLSNIY G
Sbjct: 560 IESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGML 619
Query: 571 DEVENLRRIMKEKELEKAVGSSLV 594
+E + +RR+M + K G S +
Sbjct: 620 EEADEVRRLMGINGVRKESGCSWI 643
>gi|225444117|ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 553
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 301/548 (54%), Gaps = 46/548 (8%)
Query: 93 SRVLKKLCTSLSSVSLSVLFFDGIQE---PDAFMC-----NTIMKSFLMLNDPFGALSFY 144
SR L+K+ L++ + FD + AF+ N ++++F P A+ Y
Sbjct: 2 SRQLQKILVCLTASPPDIKVFDQVLTQTITTAFIHATPTWNCLIRAFSRSPTPITAILIY 61
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ +FV + YT+P + K C + SL +GK+VHA + K G + D++V N+L+H+Y
Sbjct: 62 NHFIKGRFVFPDKYTYPAMLKACWRMGSLSKGKEVHAHVTKTGLDSDVYVGNALLHLYGS 121
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR--------------------------- 237
G+V DAR++F+ P DL +WN+++ Y N
Sbjct: 122 TGQVTDARRLFDGMPHRDLASWNTLLGAYNDNAVEVLVLFKRMMYEGIGGDHISMVIVFS 181
Query: 238 ---EVG---FARELFDFMPERDIFTW----NSMISGYVDVGDMEAANGLF-DLMPFRDVV 286
++G F +E+ ++ + I N+++ Y G+M+AA LF ++ RDVV
Sbjct: 182 ACGKIGGTEFGKEVHGYVIKVGIRPALSLSNALLGVYTKCGEMDAAQSLFVEMAAMRDVV 241
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
S + +GY +G++ AR FD+M ++++VSWN ++ YV+ K + + LF +M
Sbjct: 242 SHTILFNGYVDMGSIDLARGIFDQMSVKDLVSWNSMIHAYVKAKHPKKAIELFRKMENEM 301
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
+P+E +++SVL ACA++ + G+ H +I + + D+ + T+L+ MYAKCG ++ A
Sbjct: 302 VEPDETTMVSVLAACASLADLQNGRLAHRFIIQNNPRQDLFVGTALIDMYAKCGSLEEAM 361
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
F M ++V +W + I G HG G+KAL +F EMEK+G PN ATF+ VL AC+ +G
Sbjct: 362 VTFYKMDSRDVFTWTTAIEGLANHGHGDKALSLFTEMEKQGIKPNQATFVSVLMACSRSG 421
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+V EG F M Y+I+PK+EH GC++D+L RAGL+ +EE + +P + L
Sbjct: 422 LVKEGCLLFKRMVEAYQIQPKIEHLGCLLDILSRAGLLHQAEEFIKLMPPKEKIIANKTL 481
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
LSAC H +LG+ +A L EL + ++LLSN YA G+W EV RR+MKE ++
Sbjct: 482 LSACMNHLEYDLGEKIANGLTELSSQSHATHILLSNFYALAGQWAEVAKTRRVMKEIDIR 541
Query: 587 KAVGSSLV 594
K G S V
Sbjct: 542 KVPGISSV 549
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P + LS+ +L C + L V + + +L + S+ L+
Sbjct: 206 PALSLSNALLGVYTKCGEMDAAQS----LFVEMAAMRDVVSHTILFNGYVDMGSIDLARG 261
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + D N+++ +++ P A+ + KM + VE + T + CA +
Sbjct: 262 IFDQMSVKDLVSWNSMIHAYVKAKHPKKAIELF-RKMENEMVEPDETTMVSVLAACASLA 320
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L+ G+ H I++ DLFV +LI MY+ CG + +A F D+ TW + I+
Sbjct: 321 DLQNGRLAHRFIIQNNPRQDLFVGTALIDMYAKCGSLEEAMVTFYKMDSRDVFTWTTAIE 380
Query: 232 GYVKNREVGFARELFDFMPERDI 254
G + A LF M ++ I
Sbjct: 381 GLANHGHGDKALSLFTEMEKQGI 403
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 330/631 (52%), Gaps = 86/631 (13%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV-SLSVLFFDGIQEPDAFMCNTIMKS 130
Q+H Q++ + L ++ + ++ CT L + + L F+ P+ F+ ++++
Sbjct: 16 HLRQLHAQIIHNSLHHHNYWVALLINH-CTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRF 74
Query: 131 FLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL 190
+ L D + YE+M V + + +P+L K AG G HA ++K G
Sbjct: 75 YSHLQD-HAKVVLMYEQMQGCGVRPDAFVYPILIK-SAGT----GGIGFHAHVLKLGHGS 128
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD---------------------------- 222
D FVRN++I MY+ G + ARKVF++ P ++
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 223 -----LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF 277
++TW +M+ GY K +++ AR FD MPER + +WN+M+SGY G E A LF
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLF 248
Query: 278 DLMPFR----DVVSW------------------------------NC-----MIDGYAKI 298
D M D +W NC ++D YAK
Sbjct: 249 DEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKF 308
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSV 357
G++ SAR F+ M RNVV+WN ++A Y + + LF MI P+E +++SV
Sbjct: 309 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 368
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
++AC ++G +++G W+ ++ + +IK + +++ MY++CG M+ A+ VF M ++V
Sbjct: 369 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDV 428
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
VS+N++I G+ HG G +A+ + M++ G P+ TFI VL+AC+HAG++ EG F+
Sbjct: 429 VSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES 488
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
++ +P ++HY CMVDLLGR G + D++ + ++PME ++G+LL+A H E
Sbjct: 489 IK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVE 543
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
LG++ A L ELEP + G ++LLSNIYAS G+W +VE +R MK+ ++K G S V G
Sbjct: 544 LGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYG 603
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ IV + R +Y +L E+ +M+
Sbjct: 604 GKLHKFIVADRSHERSDDIYQLLIELRKKMR 634
>gi|357478647|ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510664|gb|AES91806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 319/564 (56%), Gaps = 37/564 (6%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQ-DSFAASRVLKKLCTSLSSVSLSVL-FFDGIQEPDA 121
++ CSTVK QIH Q++ + L+ + R+L T+ ++S +L ++ PD+
Sbjct: 10 MKKCSTVKHAKQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILSILHHLRNPDS 69
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
F +++ F A+S Y + +H +L K CA + G +H
Sbjct: 70 FSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSIL-KSCARVEDDLCGLLIHG 128
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV-- 239
+ K GF+ ++V+ +L+ +Y G+V+ ARKVF++ P ++V+WNS++ GY+K +
Sbjct: 129 HVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDE 188
Query: 240 ---------------------GFARE--------LFDFMPERDIFTWNSMISGYVDVGDM 270
G+A+ LF MPER+ +WN+MI+GYVD G +
Sbjct: 189 GQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSI 248
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
A LFD MP R+ VS MI GY+K G+V SAR FD+M ++++S+N ++A Y +
Sbjct: 249 VEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSS 308
Query: 331 DYCECLRLFDRMIRGDAK--PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
E L LF+ M++ D+ P++ +L SV++AC+ +G ++ +WI S I I D L
Sbjct: 309 KPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHL 368
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+T+L+ +YAKCG +D A +F + +++VV++++MI G G++G+ A+E+F M
Sbjct: 369 ATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECI 428
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
PN T+ +L+A HAG+ EG+ F M+ I P V+HYG MVDLLGRAG + ++
Sbjct: 429 IPNLVTYTGILTAYNHAGLAEEGYRCFISMKD-NGIVPSVDHYGIMVDLLGRAGWLDEAY 487
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+L+ K+PM+ +WGALL AC H N +LG+I QH ++LE G Y LLS IYA+ G
Sbjct: 488 KLIMKMPMQPNVGVWGALLLACRLHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYATVG 547
Query: 569 KWDEVENLRRIMKEKELEKAVGSS 592
KW++ + L ++ K++ K G S
Sbjct: 548 KWNDAKKLTTGVEGKKIIKIPGCS 571
>gi|302142752|emb|CBI19955.3| unnamed protein product [Vitis vinifera]
Length = 488
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/525 (35%), Positives = 297/525 (56%), Gaps = 71/525 (13%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M A VE N +TF L K ++L +G+ +H I+K GF +FV+NSL+ Y+ C E
Sbjct: 1 MKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSE 60
Query: 208 VL-DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNS------- 259
L A +VFE+ P D+++WNSMI Y+ E+ A L D MPER+I TWNS
Sbjct: 61 NLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSK 120
Query: 260 ------------------------MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
MISGYV +GD+ AA +F MP + VVSW MI GY
Sbjct: 121 AGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGY 180
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASL 354
A G++ SA N F+ M ++NVVSWN +++ YV ++ + L +F M I G+ +P++ +L
Sbjct: 181 ATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTL 240
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+S+L+ACA++G ++ G+WI+SYI+K ++ + L +L+ M+AKCG ++ A+ VF +M++
Sbjct: 241 ISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSK 300
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
+ +++W +M+ G ++G+ +A+ +F +M G P+D FI VLSACTH G+V EG
Sbjct: 301 RCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRV 360
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
FD M + + I+P++EHYGCMVDLLGRAG + +++
Sbjct: 361 FDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAK-------------------------- 394
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+M+ EP +P L+SN+ AS G+W++V + R M+++ +EK G S +
Sbjct: 395 -----------IMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSI 443
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQIS 639
G E + ++ ++ +Y L + Q+K+ D A +IS
Sbjct: 444 QVGNRVHEFLAKDTRHVQRKEIYRALVCLNGQLKV-ECDCAIRIS 487
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N ++ ++ ++ AL ++ ++ + T + CA + SL GK +++ I
Sbjct: 205 NAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIK 264
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K L + + N+LI M++ CG+V +A++VF ++TW +M+ G N + A
Sbjct: 265 KNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAIN 324
Query: 245 LFDFM------PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMID 293
LFD M P+ IF +++S G +E +FD M + + CM+D
Sbjct: 325 LFDKMCLEGTKPDDVIFI--AVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVD 382
Query: 294 GYAKIGNVTSAR 305
+ G + A+
Sbjct: 383 LLGRAGKLEEAK 394
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 301/535 (56%), Gaps = 37/535 (6%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+ + +T+ + HQIH Q+ + L +S ++++ C SL S+ ++ F P+ F+
Sbjct: 47 IHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSC-SLKSLDYALSIFRCFDHPNLFV 105
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N +++ L N F ++ M+ + + T P + K A + + G+ +H +
Sbjct: 106 FNALIRG-LAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGV 164
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E D FVR SL+ MY VK E+GF
Sbjct: 165 MKLGLEFDSFVRVSLVDMY-------------------------------VKIGELGFGL 193
Query: 244 ELFDFMPERD----IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
+LFD P+R+ I WN +I+G VGD+ A LF+ MP R+ SWN +I+G+ + G
Sbjct: 194 QLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNG 253
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
++ AR F +M +NVVSW ++ + + D+ + L +F RM+ +PN+ +++S L
Sbjct: 254 DLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALL 313
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
AC +G + +G+ IH+Y+ + + + T+L+ MYAKCG + A VF K++++
Sbjct: 314 ACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLT 373
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W+ MI G+ +HG ++AL+ F++M+ G P++ F+ +L+AC+H+G V +G +F+ M+
Sbjct: 374 WSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMR 433
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y IEP ++HY +VDLLGRAG + ++ + +P+ +WGAL AC H N E+
Sbjct: 434 LDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMA 493
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ A+ L++LEP+ PG YV LSN+YA+ G+W++VE +R +MK + +EK G S +
Sbjct: 494 ELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYI 548
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 310/572 (54%), Gaps = 37/572 (6%)
Query: 78 TQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDP 137
+ L + +S+ S + + + ++L++ FF I PD+F NT++ + + +
Sbjct: 54 AERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRSIPRPDSFSYNTLLHALGVSSSL 113
Query: 138 FGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNS 197
A + + E + V +N + G+ SL E D N
Sbjct: 114 ADARALFDEMPVKDSVSYN---VMISSHANHGLVSLAR------HYFDLAPEKDAVSWNG 164
Query: 198 LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTW 257
++ Y G + +AR +F+ WD ++WN+++ GYV+ ++ A+++F+ MP+RD+ +W
Sbjct: 165 MLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQIEEAQKMFNRMPQRDVVSW 224
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
N+M+SG+ GDM A LFD+ P RDV +W ++ GYA+ G + A+ FD M +N V
Sbjct: 225 NTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAV 284
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKP--NEASLMSVLTACANMGVIDIGQWIHS 375
SWN ++A YV+ + E LFD M P N AS ++LT A G++D + I
Sbjct: 285 SWNAMMAAYVQRRMMEEAKELFDAM------PCRNVASWNTMLTGYAQAGMLDEARAIFD 338
Query: 376 YI-QKCRIKPDVLLST-----------------SLLTMYAKCGVMDLARNVFDNMTEKNV 417
+ QK + +L+ MY KCG M+ A + F+ M E+++
Sbjct: 339 MMPQKDAVSWAAMLAAYSQGGFSEETLQLFKEMGRCAMYFKCGNMEEAHSAFEEMEERDI 398
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
VSWN+MI GY HG G++ALE+F M K P+D T + VL+AC+H+G+V +G YF
Sbjct: 399 VSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYS 458
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M R + + K EHY CM+DLLGRAG + ++ L+ +P E +WGALL A H NSE
Sbjct: 459 MHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSE 518
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-P 596
LG+ A+ + ELEP + G YVLLSNIYAS GKW +V+ +R +M E+ ++K G S +
Sbjct: 519 LGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRLMMHERGVKKVPGFSWIEVQ 578
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ + S+ ++ P R+ I Y L ++ +MK
Sbjct: 579 NKVHTFSVGDSVHPEREDI-YGFLEDLDIRMK 609
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
+ ++ RN I + G V DA ++F T+N+M+ GY N + A F
Sbjct: 32 DAEVIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRS 91
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+P D F++N+++ + A LFD MP +D VS+N MI +A G V+ AR+ F
Sbjct: 92 IPRPDSFSYNTLLHALGVSSSLADARALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF 151
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN----- 363
D ++ VSWN +LA Y+R E LFD DA A LM+ C+
Sbjct: 152 DLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNA-LMAGYVQCSQIEEAQ 210
Query: 364 -----MGVIDIGQWIHSYIQKCR------------IKP--DVLLSTSLLTMYAKCGVMDL 404
M D+ W R + P DV T++++ YA+ G+++
Sbjct: 211 KMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEE 270
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A+ VFD M EKN VSWN+M+ Y E+A E+F M P N A++ +L+
Sbjct: 271 AKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAM----PCRNVASWNTMLTGYAQ 326
Query: 465 AGMVLEGWWYFDLM 478
AGM+ E FD+M
Sbjct: 327 AGMLDEARAIFDMM 340
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 299/505 (59%), Gaps = 34/505 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+ + E +A N ++ FL+ D A+ F+ EH+ + +CA I
Sbjct: 156 LFNAMPEHNAVSYNAVITGFLLNGDVESAVGFF-----RTMPEHDSTS------LCALIS 204
Query: 172 SL-REGK-KVHARIVK-CGFELD-----LFVRNSLIHMYSVCGEVLDARKVFEDGPVW-- 221
L R G+ + A I++ CG D + N+LI Y G V +AR++F+ P
Sbjct: 205 GLVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDD 264
Query: 222 -----------DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM 270
++V+WNSM+ YVK ++ FARELFD M ERD +WN++IS YV + +M
Sbjct: 265 DGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMVERDNCSWNTLISCYVQISNM 324
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
E A+ LF MP DV+SWN +I G A+ G++ A++ F+RM +N++SWN ++A Y + +
Sbjct: 325 EEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNE 384
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
DY ++LF M +P++ +L SV++ + + +G+ +H + K + PD ++
Sbjct: 385 DYKGAIKLFSEMQLEGERPDKHTLSSVISVSTGLVDLYLGKQLHQLVTKT-VLPDSPINN 443
Query: 391 SLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
SL+TMY++CG + A VF+ + K+V++WN+MI GY HG +ALE+F M++
Sbjct: 444 SLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIH 503
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
P TFI VL+AC HAG+V EGW F M Y IEP+VEH+ +VD+LGR G ++++ +
Sbjct: 504 PTYITFISVLNACAHAGLVEEGWRQFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMD 563
Query: 510 LVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGK 569
L++ +P + A+WGALL AC H+N EL + A L+ LEP PYVLL N+YA+ G+
Sbjct: 564 LINTMPFKPDKAVWGALLGACRVHNNVELALVAADALIRLEPESSAPYVLLYNMYANLGQ 623
Query: 570 WDEVENLRRIMKEKELEKAVGSSLV 594
WD+ E++R +M+EK ++K G S V
Sbjct: 624 WDDAESVRVLMEEKNVKKQAGYSWV 648
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 64/388 (16%)
Query: 202 YSVCGE--VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNS 259
+S CG V + R++FE P D V+WN++I GY KN + A +LF+ MPE + ++N+
Sbjct: 111 FSCCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNA 170
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVS-------------------------------- 287
+I+G++ GD+E+A G F MP D S
Sbjct: 171 VITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAGILRECGNGDDGKD 230
Query: 288 -----WNCMIDGYAKIGNVTSARNCFD-------------RMCMRNVVSWNILLALYVRC 329
+N +I GY + G+V AR FD R RNVVSWN ++ YV+
Sbjct: 231 DLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKA 290
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
D LFDRM+ D + +L+S +NM S + + PDVL
Sbjct: 291 GDIVFARELFDRMVERD-NCSWNTLISCYVQISNMEEA-------SKLFREMPSPDVLSW 342
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
S+++ A+ G ++LA++ F+ M KN++SWN++I GY + + A+++F EM+ G
Sbjct: 343 NSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGER 402
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK-IEPKVEHYGCMVDLLGRAGLMRDSE 508
P+ T V+S T G+V + + L Q + K + P ++ + R G + D+
Sbjct: 403 PDKHTLSSVISVST--GLV-DLYLGKQLHQLVTKTVLPDSPINNSLITMYSRCGAIVDAC 459
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNS 536
+ +++ + W A++ ++H ++
Sbjct: 460 TVFNEIKLYKDVITWNAMIGGYASHGSA 487
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 183/387 (47%), Gaps = 39/387 (10%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G + +AR +F+ D VTWNSMI GYV+ RE+ AR+LFD MP RD+ +WN ++SGY
Sbjct: 52 GRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYF 111
Query: 266 DVGD---MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
+E LF+LMP RD VSWN +I GYAK G + A F+ M N VS+N +
Sbjct: 112 SCCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAV 171
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+ ++ D + F M D+ SL ++++ G +D+ I +++C
Sbjct: 172 ITGFLLNGDVESAVGFFRTMPEHDS----TSLCALISGLVRNGELDLAAGI---LRECGN 224
Query: 383 KPD-----VLLSTSLLTMYAKCGVMDLARNVFDNMT-------------EKNVVSWNSMI 424
D V +L+ Y + G ++ AR +FD + +NVVSWNSM+
Sbjct: 225 GDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMM 284
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
M Y G A E+F M +R ++ ++ ++S + E F M
Sbjct: 285 MCYVKAGDIVFARELFDRMVER----DNCSWNTLISCYVQISNMEEASKLFREMP----- 335
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
P V + ++ L + G + +++ ++P + + W +++ + + + G I
Sbjct: 336 SPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLIS-WNTIIAGYEKNEDYK-GAIKLF 393
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWD 571
M+LE P + L S I S G D
Sbjct: 394 SEMQLEGERPDKHTLSSVISVSTGLVD 420
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
S L+ + G + AR +FD+M ++ V+WNSMI GY + +A ++F EM +R
Sbjct: 41 SNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDV 100
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+ S C + V EG F+LM
Sbjct: 101 VSWNLIVSGYFSCCG-SRFVEEGRRLFELM 129
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 269/464 (57%), Gaps = 32/464 (6%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ Y+ + +AR++F+ P DLV+WNSM+ GY +N E+ + F+ M ERD+
Sbjct: 31 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 90
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN M+ G+V+VGD+ ++ F+ +P + VSW M+ G+A+ G + AR FD+M +RN
Sbjct: 91 SWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRN 150
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDA---------------------------- 347
VV+WN ++A YV+ E + LF M ++
Sbjct: 151 VVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPY 210
Query: 348 --KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
KP++++ L++CA++ + +G+ +H + K D+ +S +L+TMYAKCG + A
Sbjct: 211 RNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSA 270
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+F ++ +VVSWNS+I Y ++G G +AL++F +ME G P++ TF+ +LSAC+H
Sbjct: 271 ELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHV 330
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G++ +G F M + Y IEP EHY CMVDLLGRAG + ++ +LV + + A +WGA
Sbjct: 331 GLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGA 390
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL AC H N EL K A+ L+E EP YVLLSN+ A G+WDEV +RR+MKEK
Sbjct: 391 LLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGA 450
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCI-VYSMLGEIGAQMK 628
EK G S + + E+ P H + + + +L + A M+
Sbjct: 451 EKQPGWSWIELQNRVHAFLSED-PAHPRAVELCHILRSLTAHMR 493
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA + +L+ GK++H ++K G+ DLFV N+LI MY+ CG + A +F+D +D+V+W
Sbjct: 226 CAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSW 285
Query: 227 NSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLM-- 280
NS+I Y N A +LF M D T+ ++S VG ++ LF M
Sbjct: 286 NSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQ 345
Query: 281 -----PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
P + + CM+D + G + A M + N W LL
Sbjct: 346 AYNIEPLAE--HYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLG 393
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 23/226 (10%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L SC+ + Q+H ++ SG + D F S L + S+S + L F I D
Sbjct: 223 LSSCAHLAALQVGKQLHQLVMKSGYATDLF-VSNALITMYAKCGSISSAELLFKDIDHFD 281
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
N+++ ++ + + AL ++ KM + V + TF + C+ + + +G K+
Sbjct: 282 VVSWNSLIAAYALNGNGREALKLFH-KMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLF 340
Query: 181 ARIVKCGFELDLFVRN--SLIHMYSVCGEVLDA------RKVFEDGPVWDLVTWNSMIDG 232
+V+ + ++ + ++ + G + +A K+ + +W + I G
Sbjct: 341 KCMVQ-AYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHG 399
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
++ + A +L +F P + S YV + +M+A G +D
Sbjct: 400 NLELAKFA-AEKLLEFEPHKT--------SNYVLLSNMQAEAGRWD 436
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 299/554 (53%), Gaps = 41/554 (7%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FDGI +PD M NTI +++ + P AL + M+ + V N +T P + K C ++
Sbjct: 2 FDGILDPDRVMYNTITRAYCNSDCPREALRLH-RCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
VH +K GF +FV N+L+H Y+ G + D+R+ F++ ++V+WNSMI G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 233 YVKNREVGFARELFDFMPER----DIFTWNSM---------------------ISG---- 263
Y + + A LF M + D FT S+ +SG
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVD 180
Query: 264 ----------YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
Y GD+ A F++MP + VVSW M+ K G+V +AR FD M
Sbjct: 181 LILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPE 240
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RN VSWN +++ YV+ Y E L L+ +M P+EA+L+ VL+AC +G + +G+ +
Sbjct: 241 RNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMV 300
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H YI+ PD+ L SLL MYAKCG +D A +F M +NVVSWN +I G MHG+
Sbjct: 301 HLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRA 360
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
A+ F M R +P+ TF+ +LS+C+H G++ G YF+ M+ +Y ++ +VEHY C
Sbjct: 361 LDAITFFRSM-VRNTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYAC 419
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGR G + + L+ ++PM+ +WGALL AC H N ++GK V + L+ELE
Sbjct: 420 MVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGIS 479
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
G +VL+SN+ +W++++ LR++MKE+ K +G S + E VE+
Sbjct: 480 GGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEFGVEDIRHESS 539
Query: 614 CIVYSMLGEIGAQM 627
+Y+++ ++ +
Sbjct: 540 SEIYAVVDQLSYHL 553
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 190/416 (45%), Gaps = 53/416 (12%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H L G F A+ +L S S+ S FFD + + N+++ +
Sbjct: 67 VHGVALKLGFVGQVFVANALLHSY-ASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAG 125
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
D A + + E F+ + +T L C+ +L G+ VH ++ G +DL +
Sbjct: 126 DTREACALFGEMRRQGFLG-DEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILG 184
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
+L+ MYS CG++ AR+ FE P+ +V+W SM+ K+ V AR FD MPER+
Sbjct: 185 GALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTV 244
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFR-------------------------------- 283
+WN+MIS YV G A L+ M
Sbjct: 245 SWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYI 304
Query: 284 -------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL---LALYVRCKDYC 333
D+ N ++D YAK G V +A F MC RNVVSWN++ LA++ R D
Sbjct: 305 RDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALD-- 362
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSL 392
+ F M+R + P+ + +++L++C++ G+++ GQ + S +K +V +
Sbjct: 363 -AITFFRSMVR-NTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACM 420
Query: 393 LTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
+ + + G ++ A + M K +VV W +++ +HG G++ ++ +E+E
Sbjct: 421 VDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELE 476
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 286/488 (58%), Gaps = 9/488 (1%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N ++ + + + P A Y + F+ + +TFP + K CA + EG++VH I+
Sbjct: 3 NALVSGYAIGDRPKTAFLVYRRIVKDGFLP-DMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K GF +++V NSL+H YSVC DA +VF++ V D+V+W +I GYV+ A
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 245 LFDFMP-ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW-----NCMIDGYAKI 298
LF M E + T+ S++ G + G+ L F+ N ++D Y K
Sbjct: 122 LFLRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGL-SFKSAFGVGLEVSNALMDMYVKC 180
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A+ FD + +++VSW +++ V+C E L LF M +P+ L SVL
Sbjct: 181 GCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVL 240
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+ACA +G +D G+W+H +I + IK D+ + T+++ MYAKCG ++++ +F+ M KNV+
Sbjct: 241 SACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVL 300
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+WN+++ G MHG K LE+F EM + G PN+ TF+ +L+AC H G+V EG YF+ M
Sbjct: 301 TWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWM 360
Query: 479 Q-RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ + Y + P++EHYGCMVDLL RA L+ ++ EL +PM + GALLSAC + N+E
Sbjct: 361 KGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTE 420
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
L + + +EL+ D G YVLLSNI+A +WD+V +RR+MKEK ++K GS+++
Sbjct: 421 LPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELD 480
Query: 598 EFASESIV 605
A E IV
Sbjct: 481 GKAHEFIV 488
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/483 (36%), Positives = 286/483 (59%), Gaps = 15/483 (3%)
Query: 147 KMMAKFVEHNHYTFPLL--GKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ + E NH T+ +L G + AG + E +K+ + + D+ R +++ Y
Sbjct: 133 RLFHQMPERNHVTYTVLLGGFLDAG--RVNEARKLFDEMP----DKDVVARTAMLSGYCQ 186
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G + +AR +F++ P ++V+W +MI GY +N +V AR+LF+ MP+R+ +W +M+ GY
Sbjct: 187 AGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGY 246
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ G +E A LF+ MP V + N M+ G+ + G V +A+ F+RMC R+ +W+ ++
Sbjct: 247 IQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIK 306
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+Y + + E L F M+ +PN S +S+LT CA + D G+ +H+ + +C
Sbjct: 307 VYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDT 366
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
DV ++L+TMY KCG +D A+ VF+ K+VV WNSMI GY HG GE+AL +F ++
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLR 426
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
P+ T+I VL+AC++ G V EG F+ M I HY CMVDLLGRAGL+
Sbjct: 427 LARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLV 486
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ +L++ +P+E +WGAL+ AC H N+E+ ++ A+ L+ELEP GPYVLLS+IY
Sbjct: 487 DEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIY 546
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE----FASESIVENCPPHRKCIVYSML 620
S G+W++ ++R+ + + L K+ G S + + F S ++ + P H I+ +ML
Sbjct: 547 TSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSH-PEH--AIILNML 603
Query: 621 GEI 623
E+
Sbjct: 604 EEL 606
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 142/277 (51%), Gaps = 14/277 (5%)
Query: 191 DLFVRNSLIHMYSVCGEVL-DARKVFEDGPVW-DLVTWNSMIDGYVKNREVGFARELFDF 248
DL N+LI S+ L DA P+ +V++ S++ GYV++ + A LF
Sbjct: 78 DLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQ 137
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+ T+ ++ G++D G + A LFD MP +DVV+ M+ GY + G +T AR F
Sbjct: 138 MPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALF 197
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D M RNVVSW +++ Y + +LF+ M NE S ++L G ++
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGKVILARKLFEVM----PDRNEVSWTAMLVGYIQAGHVE 253
Query: 369 IGQWIHSYIQKCRIKPD--VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ + + + PD V +++ + + G++D A+ +F+ M ++ +W++MI
Sbjct: 254 DAEDLFNAM------PDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKV 307
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
Y + +AL F EM RG PN +FI +L+ C
Sbjct: 308 YEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCA 344
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+ I G + AR F+ P+ ++N++I GY +N A LF MP RD+
Sbjct: 21 NARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLG 80
Query: 256 TWNSMISGYV----DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
++N++I+G + D AA L P VVS+ ++ GY + G + A F +M
Sbjct: 81 SYNALIAGLSLRRHTLPDAAAALASIPLPP--SVVSFTSLLRGYVRHGLLADAIRLFHQM 138
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
RN V++ +LL ++ E +LFD M D A +L+ G I +
Sbjct: 139 PERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTA----MLSGYCQAGRITEAR 194
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+ + K +V+ T++++ YA+ G + LAR +F+ M ++N VSW +M++GY G
Sbjct: 195 ALFDEMP----KRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAG 250
Query: 432 QGEKALEMFMEM 443
E A ++F M
Sbjct: 251 HVEDAEDLFNAM 262
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 128/258 (49%), Gaps = 14/258 (5%)
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
+V N+ I V+ + AR FD MP R ++N++I+GY +AA GLF MP
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 283 RDVVSWNCMIDGYA-KIGNVTSARNCFDRMCM-RNVVSWNILLALYVRCKDYCECLRLFD 340
RD+ S+N +I G + + + A + + +VVS+ LL YVR + +RLF
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+M + N + +L + G ++ + + + DV+ T++L+ Y + G
Sbjct: 137 QM----PERNHVTYTVLLGGFLDAGRVNEARKLFDEMP----DKDVVARTAMLSGYCQAG 188
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ AR +FD M ++NVVSW +MI GY +G+ A ++F M P N+ ++ +L
Sbjct: 189 RITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVM----PDRNEVSWTAMLV 244
Query: 461 ACTHAGMVLEGWWYFDLM 478
AG V + F+ M
Sbjct: 245 GYIQAGHVEDAEDLFNAM 262
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
ALS + E M+ + + N+ +F + VCA + + G+++HA +++C F+ D+F ++LI
Sbjct: 317 ALSTFRE-MLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALI 375
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----ERDIF 255
MY CG + A++VF D+V WNSMI GY ++ A +FD + D
Sbjct: 376 TMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGI 435
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVV-----SWNCMIDGYAKIGNVTSARNCFDR 310
T+ +++ G ++ +F+ M + ++CM+D + G V A + +
Sbjct: 436 TYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINN 495
Query: 311 MCMR-NVVSWNILLA 324
M + + + W L+
Sbjct: 496 MPVEPDAIIWGALMG 510
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 315/566 (55%), Gaps = 11/566 (1%)
Query: 75 QIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSVSLSV-LFFDGIQEPDAFMC-NTIMKSF 131
Q+H L+ SG L+ +L+ S + + +V LF G + P + C N +M++
Sbjct: 34 QLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAL 93
Query: 132 LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD 191
L P AL + E + V + +T K C+ + +L G+ + A VK G D
Sbjct: 94 LHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMAD 153
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
FV +SLIHMY+ C +V A+ +F+ +V WN++I Y+KN E+F M E
Sbjct: 154 RFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLE 213
Query: 252 R----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS----WNCMIDGYAKIGNVTS 303
D T S+++ +GD + + + + + +V +ID YAK G +
Sbjct: 214 VGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGK 273
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FD M R+VV+W+ +++ Y + E L LF M + +PN+ +++SVL+ACA
Sbjct: 274 ARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAV 333
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G ++ G+W+HSYI++ R+ ++L T+L+ YAKCG +D A F++M KN +W ++
Sbjct: 334 LGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTAL 393
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G +G+G +ALE+F M K P D TFI VL AC+H+ +V EG +FD M + Y
Sbjct: 394 IKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYG 453
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
I+P+ EHYGC+VDLLGRAGL+ ++ + + +P+E +W ALLS+C+ H N E+G+
Sbjct: 454 IKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
+ ++ L P G Y+LLSNIYAS G+W +R+ MK++ +EK G SL+ E
Sbjct: 514 KQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEF 573
Query: 604 IVENCPPHRKCIVYSMLGEIGAQMKM 629
E+ + +Y + E+ ++KM
Sbjct: 574 FAEDSDHPQLKEIYQKVEEMIDRIKM 599
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 294/536 (54%), Gaps = 39/536 (7%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFM 123
++C + QIH ++V+GL + ++ S+ ++ + F+ I +PD +
Sbjct: 20 QNCKNFRTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEEIPKPDVSI 79
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CN +++ P ++ Y E M + V + YTF + K C+ + G +H ++
Sbjct: 80 CNHVLRGSAQSLKPEKTVALYTE-MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKV 138
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
V+ GF L+ +V+N+LI ++ CG++ G A
Sbjct: 139 VRHGFLLNEYVKNALILFHANCGDL-------------------------------GIAS 167
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
ELFD + W+SM SGY G ++ A LFD MP +D V+WN MI G K + S
Sbjct: 168 ELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDS 227
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FDR ++VV+WN +++ YV C E L +F M P+ +++S+L+ACA
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 364 MGVIDIGQWIHSYI-QKCRIKPDVLLST----SLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+G ++ G+ +H YI + + + + T +L+ MYAKCG +D A VF M ++++
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLS 347
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+WN++I+G +H E ++EMF EM++ PN+ TFI V+ AC+H+G V EG YF LM
Sbjct: 348 TWNTLIVGLALH-HAEGSVEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ +Y IEP ++HYGCMVD+LGRAGL+ ++ V + +E +W LL AC + N EL
Sbjct: 407 RDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
GK + L+ + + G YVLLSNIYAS G+WD V+ +R++ + ++K G SL+
Sbjct: 467 GKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLI 522
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 24/272 (8%)
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
L+ M + P+ + VL AC+ + G IH + + + + +L+ +A
Sbjct: 99 LYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVRHGFLLNEYVKNALILFHA 158
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
CG + +A +FD+ + + V+W+SM GY G+ ++A+ +F EM P + +
Sbjct: 159 NCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM----PDKDQVAWNV 214
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+++ C + FD E V + M+ G +++ + ++ +
Sbjct: 215 MITGCLKCREMDSARELFDRFT-----EKDVVTWNAMISGYVNCGYPKEALSIFKEMR-D 268
Query: 518 AG--PALWG--ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV------LLSNIYASE 567
AG P + +LLSAC+ + E GK + +++E YV L ++YA
Sbjct: 269 AGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 568 GKWDEVENLRRIMKEKELEK----AVGSSLVH 595
G D + R MK+++L VG +L H
Sbjct: 329 GSIDRAIEVFRGMKDRDLSTWNTLIVGLALHH 360
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 207/589 (35%), Positives = 313/589 (53%), Gaps = 50/589 (8%)
Query: 87 QDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYE 146
+++F+ + VL L T ++ ++ F + E D N ++ F + AL F +
Sbjct: 83 RNTFSWNAVLGAL-TKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
FV N Y+F CAG+ L G ++H I K + LD+++ ++L+ MYS C
Sbjct: 142 MHSEDFV-LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCR 200
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PER-------- 252
V A++ F+D V ++V+WNS+I Y +N G A E+F M P+
Sbjct: 201 VVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVAS 260
Query: 253 --------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
D+ N+++ Y + A +FD MP RDVV
Sbjct: 261 ACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVV 320
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
S M+ GYAK +V +AR F M RNVVSWN L+A Y + + E +RLF + R
Sbjct: 321 SETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI------KPDVLLSTSLLTMYAKCG 400
P + ++L ACAN+ + +G+ H++I K D+ + SL+ MY KCG
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCG 440
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+++ R VF+ M E++ VSWN+MI+GY +G G +ALE+F EM G P+ T I VLS
Sbjct: 441 LVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLS 500
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+HAG+V EG YF M + + P +HY CMVDLLGRAG + ++ L+ +PME
Sbjct: 501 ACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDA 560
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+WG+LL+AC H N LGK VA+ L+E++P + GPYVLLSN+YA G+W +V +R+ M
Sbjct: 561 VVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQM 620
Query: 581 KEKELEKAVGSSLVHPGEFASESIVENC-PPHRKCIVYSMLGEIGAQMK 628
++ + K G S + +V++ PH+K I Y +L + QMK
Sbjct: 621 RQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDI-YLILKILTEQMK 668
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 210/450 (46%), Gaps = 89/450 (19%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
F L C +S+ E + VHARI+K F ++F++N L+ +Y CG + DARKVF+
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD----------VGD 269
+ +WN+++ K + A LF MPERD +WN+M+SG+ V D
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 270 ME----------------AANGLFDL-------------MPFRDVVSWNCMIDGYAKIGN 300
M A GL DL DV + ++D Y+K
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRV 201
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
V SA+ FD M +RN+VSWN L+ Y + + L +F RM+ +P+E +L SV +A
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASA 261
Query: 361 CANMGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFD--------- 410
CA++ I G IH+ + K + + D++L +L+ MYAKC ++ AR VFD
Sbjct: 262 CASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVS 321
Query: 411 ----------------------NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
NM E+NVVSWN++I GY +G+ E+A+ +F+ +++
Sbjct: 322 ETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381
Query: 449 TPNDATFICVLSAC-----------THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
P TF +L+AC H ++ G+W+ + + ++D+
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS------GEDSDIFVGNSLIDM 435
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ GL+ D LV + +E W A++
Sbjct: 436 YMKCGLVEDG-RLVFERMLERDNVSWNAMI 464
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 181/378 (47%), Gaps = 8/378 (2%)
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR----ELFDFMPERDIFTWNSMISGYVDV 267
RKV D D + ++D VK++ V AR + +IF N ++ Y
Sbjct: 8 RKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKC 67
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
G +E A +FD M R+ SWN ++ K G + A N F M R+ SWN +++ +
Sbjct: 68 GFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFA 127
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ + E LR M D NE S S L+ACA + + IG IH I K R DV
Sbjct: 128 QRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVY 187
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+ ++L+ MY+KC V+ A+ FD+M +N+VSWNS+I Y +G KALE+F+ M G
Sbjct: 188 MGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCG 247
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P++ T V SAC + EG + + K + +VD+ + + ++
Sbjct: 248 IEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEA 307
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+ ++P+ + +++S + S+ + +++ ++ME R+ + L Y
Sbjct: 308 RLVFDRMPLRDVVS-ETSMVSGYAKASSVKAARLMFSNMME---RNVVSWNALIAGYTQN 363
Query: 568 GKWDEVENLRRIMKEKEL 585
G+ +E L ++K + +
Sbjct: 364 GENEEAVRLFLLLKRESI 381
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 254/403 (63%), Gaps = 1/403 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D R S+IH G V +AR++F++ ++TW +M+ GY +N V AR++FD MP
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E+ +W SM+ GYV G +E A LF++MP + V++ N MI G + G + AR FD
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDS 290
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RN SW ++ ++ R E L LF M + +P +L+S+L+ CA++ + G
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H+ + +C+ DV +++ L+TMY KCG + ++ +FD K+++ WNS+I GY H
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 431 GQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
G GE+AL++F EM G T PN+ TF+ LSAC++AGMV EG ++ M+ ++ ++P
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HY CMVD+LGRAG ++ E++ + +E A+WG+LL AC THS ++ + A+ L+E+
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
EP + G Y+LLSN+YAS+G+W +V LR++MK + + K+ G S
Sbjct: 531 EPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 150/286 (52%), Gaps = 16/286 (5%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N I S G++ +ARK+F+ + +WNSM+ GY N AR+LFD MP+R+I
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN ++SGY+ G+++ A +FDLMP R+VVSW ++ GY G V A + F +M +N
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VSW ++L +++ + +L++ + D + S++ G +D + I
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKD----NIARTSMIHGLCKEGRVDEAREIFD 196
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ + V+ T+++T Y + +D AR +FD M EK VSW SM+MGY +G+ E
Sbjct: 197 EMS----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 436 ALEMFMEMEKRGPTPNDATFIC--VLSACTHAGMVLEGWWYFDLMQ 479
A E+F M P C ++S G + + FD M+
Sbjct: 253 AEELFEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 41/299 (13%)
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
T N I+ +G + A LFD + + SWN M+ GY AR FD M RN
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ---W 372
++SWN L++ Y++ + E ++FD M + N S +++ + G +D+ + W
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 373 -------------IHSYIQKCRI-----------KPDVLLSTSLLTMYAKCGVMDLARNV 408
+ ++Q RI D + TS++ K G +D AR +
Sbjct: 135 KMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M+E++V++W +M+ GYG + + + A ++F M P + ++ +L G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQNGRI 250
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ F++M ++P + M+ LG+ G + + + + E A W ++
Sbjct: 251 EDAEELFEVM----PVKPVIA-CNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 159 TFPLLGK---VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
TFP L VCA + SL GK+VHA++V+C F++D++V + L+ MY CGE++ ++ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-----ERDIFTWNSMIS-----GYV 265
+ P D++ WNS+I GY + A ++F MP + + T+ + +S G V
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 266 DVG--DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNIL 322
+ G E+ +F + P + CM+D + G A D M + + W L
Sbjct: 450 EEGLKIYESMESVFGVKPI--TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 323 LA 324
L
Sbjct: 508 LG 509
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 306/551 (55%), Gaps = 42/551 (7%)
Query: 79 QLLVSGLSQDSFAASRVLKKLCTS---LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+L+VSG + S A R + L S L++ +V F F+ N ++++
Sbjct: 14 RLVVSGDLRRSPAHLRRIVPLLPSHPHLAAALCAVHFPLFPSSSATFLHNILIRASASSA 73
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
P + + + + V PLLG R G +VHA+ V+ GF D+FV
Sbjct: 74 SPRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVV 133
Query: 196 NSLIHMYSV--------------------------------CGEVLDARKVFEDGPVWDL 223
N+L+ MY CGE+ A++VF++ P +
Sbjct: 134 NALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNG 193
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMPE--RDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
V+W++M+ GY E+ ARE+FD MP R++ TWNSM++G+ G + A +FD MP
Sbjct: 194 VSWSTMVGGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMP 253
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
R++VSWN M+ GY+ ++ AR FD M ++VVSW +++ Y + Y + L LF
Sbjct: 254 VRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRA 313
Query: 342 M-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR--IKPDVLLSTSLLTMYAK 398
M + +PNE +++SVL+ACAN+ ++ G+W+H++I K + + + L +L+ MYAK
Sbjct: 314 MQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAK 373
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG D+A +F+++ KNV +WN++I M+G + +++ F +M++ G PND TF+ V
Sbjct: 374 CGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEKPNDITFVGV 433
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
L+AC+H G+V EG F M ++P+V+HYGCMVD+LGRAGL+ ++EEL+ +PM
Sbjct: 434 LTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAP 493
Query: 519 GPALWGALLSACSTHSNSELGKIVAQ--HLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
++GALL AC H ++ + V H + L + G +VL+S+IYA+ GKW +V
Sbjct: 494 DVMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEA 553
Query: 577 RRIMKEKELEK 587
R++++ + K
Sbjct: 554 RQVVQRSGIRK 564
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 261/433 (60%), Gaps = 1/433 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N +I Y+ G + +AR++FE+ P+ D+ W +M+ G+V+N + A +F+ MPE++
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEV 309
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MI+GYV +E A LFD MP R+ SWN M+ GYA+ GN+ A+ FD M R+
Sbjct: 310 SWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRD 369
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+SW +++ Y + E L LF +M R N ++L L++CA + +++G+ +H
Sbjct: 370 CISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHG 429
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ K + + +LL MY KCG ++ A +VF+++TEK++VSWN+MI GY HG G++
Sbjct: 430 RLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL +F M K P+D T + VLSAC+H G+V +G YF+ M + Y I +HY CM+
Sbjct: 490 ALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMI 548
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLLGRAG + ++ L+ +P A WGALL A H ++ELG+ A+ + E+EP + G
Sbjct: 549 DLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSG 608
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
YVLLSN+YA+ G+W EV +R M++K ++K G S V V +C
Sbjct: 609 MYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAER 668
Query: 616 VYSMLGEIGAQMK 628
+Y+ L E+ ++K
Sbjct: 669 IYAYLEELDLELK 681
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 189/356 (53%), Gaps = 20/356 (5%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I Y + ARKVFE P DL++WN M+ GYVKN + AR LF+ MPE+D+
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+M+SG+ G +E A +FD M ++ +SWN ++ Y + G + AR FD
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE 214
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+VSWN L+ YVR K + LFDRM D + S ++T A G++ + +
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVRD----KISWNIMITGYAQNGLLSEARRL-- 268
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
++ I+ DV T++++ + + G++D A +F+ M EKN VSWN+MI GY Q EK
Sbjct: 269 -FEELPIR-DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A E+F +M P+ N +++ +++ G + + FD M + I + M+
Sbjct: 327 ARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS-----WAAMI 377
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGAL---LSACSTHSNSELGKIVAQHLME 548
++G ++ L K+ + G AL LS+C+ + ELGK + L++
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 223/474 (47%), Gaps = 68/474 (14%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D+ N+++ ++ G V +ARK+F+ V + ++WN ++ YV+N + AR LFD
Sbjct: 150 EKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS 209
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+ +I +WN ++ GYV ++ A LFD MP RD +SWN MI GYA+ G ++ AR F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ + +R+V +W +++ +V+ E R+F+ M + NE S +++ G +
Sbjct: 270 EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIA-----GYVQ 320
Query: 369 IGQWIHSYIQKCRIKPDVLLS------TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
Q I+K R D + S +++T YA+CG +D A+ +FD M +++ +SW +
Sbjct: 321 SQQ-----IEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAA 375
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT-----------HAGMVLEG 471
MI GY GQ E+AL +F++M++ G N + C LS+C H +V G
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 472 WWY---------------------FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ FD+ + I E + + M+ R G +++ L
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDI--TEKDIVSWNTMIAGYARHGFGKEALAL 493
Query: 511 VSKLPMEAGP---ALWGALLSACSTHSNSELGKIVAQHLMELE--PRDPGPYVLLSNIYA 565
+ M P L G +LSACS + G + + + Y + ++
Sbjct: 494 FESMKMTIKPDDVTLVG-VLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 566 SEGKWDEVENLRRIM----KEKELEKAVGSSLVHP----GEFASESIVENCPPH 611
G+ DE NL + M +G+S +H GE A+E + E P +
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA I +L GK++H R+VK GF+ N+L+ MY CG + +A VFED D+V+W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 227 NSMIDGYVKNREVGFARE---LFDFMP---ERDIFTWNSMIS-----GYVDVGDMEAANG 275
N+MI GY ++ GF +E LF+ M + D T ++S G VD G ME N
Sbjct: 475 NTMIAGYARH---GFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKG-MEYFNS 530
Query: 276 LFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
++ + + CMID + G + A N M + +W LL
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/581 (33%), Positives = 308/581 (53%), Gaps = 55/581 (9%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDA 121
Q L++ +K +H++++ L +S ++++ SL V+ + FD I E +
Sbjct: 48 QVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYA-SLKDVATARKVFDEIPERNV 106
Query: 122 FMCNTIMKSFLMLNDPFGALSFY-YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N +++S++ N+ F + M + V+ +HYTFP + K C+ ++ GKK+H
Sbjct: 107 IIINVMIRSYV--NNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIH 164
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
K G LFV N L+ MY CG + +AR V
Sbjct: 165 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL------------------------- 199
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD--LMPFRDVVSWNCMIDG---- 294
D M RD+ +WNS+++GY A N FD L R++ S D
Sbjct: 200 ------DEMSRRDVVSWNSLVAGY-------AQNQRFDDALEVCREMESVKISHDAGTMA 246
Query: 295 -------YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
NV ++ F +M +++VSWN+++ +Y++ E + L+ M
Sbjct: 247 SLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGF 306
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P+ S+ SVL AC + + +G+ IH YI++ ++ P++LL +L+ MYAKCG +D AR+
Sbjct: 307 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARD 366
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+NM ++VVSW +MI YG G+G A+ +F +M+ G P+ F+ L+AC+HAG+
Sbjct: 367 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGL 426
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ EG F LM YKI P++EH CMVDLLGRAG ++++ + + ++PME +WGALL
Sbjct: 427 LEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALL 486
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC HSN+++G + A L +L P G YVLLSNIYA G+W+EV N+R IMK K L+K
Sbjct: 487 GACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 546
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G+S V +V + + +Y L + +MK
Sbjct: 547 NPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMK 587
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 285/525 (54%), Gaps = 33/525 (6%)
Query: 71 KEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAFMCNTIMK 129
+ QIH L+V G++ +L S + + + FDGI PD FM N +++
Sbjct: 11 RSLKQIHGNLVVKGITSRLQPLRELLLACVASFNGGMDYARKVFDGISHPDLFMHNVMVR 70
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+ P A Y ++ A ++ + +TF L + CAG+ G +VH +VK G+
Sbjct: 71 GYAHSAAPAAAFVLY-RRIEAARLKPDSFTFCYLLRACAGLPGSCAGYQVHGAVVKLGYF 129
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
D FVRN+LI+M++ CG++L A + ++ D+V +++I G+ E+ AR+LFD
Sbjct: 130 KDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAKGELDIARQLFDEC 189
Query: 250 PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+D+ WN M++ Y G+ME A GL D P +DVVSWN +I GY G + A D
Sbjct: 190 QHKDLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGYTAKGLLKEALEVLD 249
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
M C+ L P+EA+++S+L+ CAN+G +
Sbjct: 250 EM----------------------RCVGLM---------PDEATIVSLLSCCANLGSLGT 278
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G+ IHS + R +L +L++MYAKCG + A VF M E++V +WNS+I G
Sbjct: 279 GRMIHSLHLEGRPCISILPGNALVSMYAKCGDVQAAMEVFSRMKERDVWTWNSIIGGLAF 338
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HGQ E++++ F +M G PN+ +F+CVL AC+HAG+V +G YF LM Y+IEP
Sbjct: 339 HGQAEQSVQFFNKMLDEGLCPNEISFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNAR 398
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HY C+VD+LGR+GL+ ++ +VS + E +W LL AC H + LGK+ + L+++
Sbjct: 399 HYSCIVDMLGRSGLLDEAFAIVSSMRCEPAVVIWRTLLGACRIHGDVALGKLARERLLKM 458
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G YVLLS IYAS +W VE +R M E+ + K G + V
Sbjct: 459 NEDASGDYVLLSGIYASCDEWFGVETVRGSMDERGIRKVAGYAQV 503
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 308/573 (53%), Gaps = 33/573 (5%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+HT ++ SG + D S + + + ++ FD + E D N ++ +
Sbjct: 320 VHTHVIKSGFAMDVVVMSSAVG-MYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 378
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
P AL + E ++ F + + T + CA + L GK++H +V+ GF LD FV
Sbjct: 379 QPEKALELFEEMKVSGF-KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 437
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI- 254
++L+ MY CG + A++VFE ++V+WNSMI GY + ELF M E I
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 497
Query: 255 ------------------FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
I GY+ +EA D+ + +ID Y
Sbjct: 498 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEA-----------DIFVNSSLIDLYF 546
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K GN+ SA N F M NVVSWN++++ YV+ Y E L +F M + KP+ + S
Sbjct: 547 KCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTS 606
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL AC+ + V++ G+ IH++I + +++ + ++ +LL MYAKCG +D A ++F+ + E++
Sbjct: 607 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERD 666
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VSW SMI YG HGQ +AL++F +M++ P+ TF+ +LSAC+HAG+V EG +YF+
Sbjct: 667 FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFN 726
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP-MEAGPALWGALLSACSTHSN 535
M Y +P VEHY C++DLLGR G +R++ E++ + P + L L SAC H
Sbjct: 727 QMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKK 786
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+LG+ + + L+E +P DP Y++LSN+YAS KWDEV +R +KE L+K G S +
Sbjct: 787 LDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIE 846
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G+ +VE+ + ++Y + + + ++
Sbjct: 847 VGKRIHPFVVEDKSHPQADMIYECMSILASHVE 879
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 251/482 (52%), Gaps = 36/482 (7%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP-DAFMCNTIM----KS 130
IH +++ GL Q++ + L L S + L F I+ P D + N +M K+
Sbjct: 217 IHQKIVSLGL-QNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKN 275
Query: 131 FLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL 190
F+ + L ++ + +++ + +T+P + K C+G+ + GK VH ++K GF +
Sbjct: 276 FIFIE----GLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM 331
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ V +S + MY+ C DA K+F++ P D+ +WN++I Y ++ + A ELF+ M
Sbjct: 332 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 391
Query: 251 ----ERDIFTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKI 298
+ D T ++IS + D+E + F L F + ++D Y K
Sbjct: 392 VSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS----SALVDMYGKC 447
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A+ F+++ +NVVSWN ++A Y D C+ LF RM +P +L S+L
Sbjct: 448 GCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSIL 507
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
AC+ + +G++IH YI + R++ D+ +++SL+ +Y KCG + A NVF NM + NVV
Sbjct: 508 MACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVV 567
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SWN MI GY G +AL +F +M K G P+ TF VL AC+ ++ +G + +
Sbjct: 568 SWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFI 627
Query: 479 QRIYKIEPKVE----HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
IE K+E G ++D+ + G + ++ + ++LP E W ++++A +H
Sbjct: 628 -----IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSMIAAYGSHG 681
Query: 535 NS 536
+
Sbjct: 682 QA 683
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 190/382 (49%), Gaps = 21/382 (5%)
Query: 163 LGKVCAGIRSLRE--GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE--DG 218
L +V AG +L E GK +H +IV G + ++ + SLI++Y C A+ VF+ +
Sbjct: 200 LARVTAG-SALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIEN 258
Query: 219 PVWDLVTWNSMIDGYVKN------REVGFARELFDFMPERDIFTWNSMIS-----GYVDV 267
P+ D+ WN ++ KN EV F R L + D FT+ S++ G V
Sbjct: 259 PL-DITLWNGLMAACTKNFIFIEGLEV-FHRLLHFPYLKPDAFTYPSVLKACSGLGRVGY 316
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
G M + + DVV + + YAK A FD M R+V SWN +++ Y
Sbjct: 317 GKMVHTHVIKSGFAM-DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYY 375
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ + L LF+ M KP+ +L +V+++CA + ++ G+ IH + + D
Sbjct: 376 QDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGF 435
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+S++L+ MY KCG +++A+ VF+ + KNVVSWNSMI GY + G + +E+F M++ G
Sbjct: 436 VSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEG 495
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P T +L AC+ + + G + + R ++E + ++DL + G + +
Sbjct: 496 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCGNIGSA 554
Query: 508 EELVSKLPMEAGPALWGALLSA 529
E + +P + W ++S
Sbjct: 555 ENVFQNMP-KTNVVSWNVMISG 575
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 195/401 (48%), Gaps = 23/401 (5%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH +L+ SG + D F +S L + + ++ F+ IQ + N+++ + +
Sbjct: 420 EIHMELVRSGFALDGFVSS-ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLK 478
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
D + + +M + + T + C+ +L+ GK +H I++ E D+FV
Sbjct: 479 GDSKSCIEL-FRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 537
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
+SLI +Y CG + A VF++ P ++V+WN MI GYVK A +F M +
Sbjct: 538 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV 597
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFDL-----MPFRDVVSWNCMIDGYAKIGNVTSAR 305
D T+ S++ + +E + + + +VV ++D YAK G V A
Sbjct: 598 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVV-MGALLDMYAKCGAVDEAL 656
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
+ F+++ R+ VSW ++A Y E L+LF++M + DAKP++ + +++L+AC++ G
Sbjct: 657 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 716
Query: 366 VIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE--KNVVSWNS 422
++D G + + I + KP V + L+ + + G + A + + ++V ++
Sbjct: 717 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 776
Query: 423 MIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
+ +H + GE+ + +E + P+D + +LS
Sbjct: 777 LFSACHLHKKLDLGEQIGRLLIEKD-----PDDPSTYIILS 812
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 38/269 (14%)
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVIDIGQWI 373
++ WN L+A + + E L +F R++ KP+ + SVL AC+ +G + G+ +
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 320
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H+++ K DV++ +S + MYAKC V + A +FD M E++V SWN++I Y GQ
Sbjct: 321 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 380
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG-WWYFDLMQRIYKIEPKVEHYG 492
EKALE+F EM+ G P+ T V+S+C + G + +L++ + ++ V
Sbjct: 381 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS--S 438
Query: 493 CMVDLLGRAGLMRDSEELVSKL---------PMEAGPALWG------------------- 524
+VD+ G+ G + ++E+ ++ M AG +L G
Sbjct: 439 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 498
Query: 525 ------ALLSACSTHSNSELGKIVAQHLM 547
++L ACS N +LGK + +++
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFIHGYII 527
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 309/585 (52%), Gaps = 25/585 (4%)
Query: 61 LQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDG 115
L L +C+ + IH +L SG+ + A+ ++ + C SL F+G
Sbjct: 435 LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN---VFEG 491
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
Q D N+++ A + E M + +E ++ TF + C +L
Sbjct: 492 TQARDVISWNSMIAGHAQHGSYETAYKLFQE-MQNEELEPDNITFASVLSGCKNPEALEL 550
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK++H RI + G +LD+ + N+LI+MY CG + DAR VF D+++W +MI G
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610
Query: 236 NREVGFARELF------DFMPERDIFTWNSMI---SGYVDVGDMEAA---NGLFDLMPFR 283
E A ELF F P + F+ + S +D G A N ++L
Sbjct: 611 QGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYEL---- 666
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D N +I Y+K G++T AR FD+M R++VSWN ++A Y + + +M
Sbjct: 667 DTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQ 726
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
D PN+ S +S+L AC++ ++ G+ +H+ I K +++ DV + +L++MYAKCG
Sbjct: 727 EQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQG 786
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A+ VFDN+ EKNVV+WN+MI Y HG KAL F MEK G P+ +TF +LSAC
Sbjct: 787 EAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACN 846
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HAG+VLEG+ F M+ Y + P +EHYGC+V LLGRA +++E L++++P A+W
Sbjct: 847 HAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVW 906
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
LL AC H N L + A + ++L R+P Y+LLSN+YA+ G+WD+V +RR+M+ +
Sbjct: 907 ETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGR 966
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ K G S + E I + +Y+ L + +M+
Sbjct: 967 GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEME 1011
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 245/531 (46%), Gaps = 34/531 (6%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVL 96
++P+P T+ +R V L LQ + E +IH Q++ + + D F S +L
Sbjct: 18 HQPRP----TETERATYVAL----LQNCTRKRLLPEAKRIHAQMVEAWVGPDIFL-SNLL 68
Query: 97 KKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
+ SV + F + D N+++ + A + E A F+ N
Sbjct: 69 INMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP-N 127
Query: 157 HYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
T+ + C L GKK+H++I+K G++ D V+NSL+ MY CG++ AR+VF
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFA 187
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PER-------DIFTWNSMISG 263
D+V++N+M+ Y + V LF M P++ D FT SM+
Sbjct: 188 GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE 247
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
+ + GL D+ ++ + G+V SA+ F R+VV +N L+
Sbjct: 248 GKRIHKLTVEEGLNS-----DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALI 302
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
A + E + RM N + +S+L AC+ ++ G+ IHS+I +
Sbjct: 303 AALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
DV + +L++MYA+CG + AR +F M +++++SWN++I GY +A+ ++ +M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
+ G P TF+ +LSAC ++ +G + + R I+ ++++ R G
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILR-SGIKSNGHLANALMNMYRRCGS 481
Query: 504 MRDSEELVSKLPMEAGPAL-WGALLSACSTHSNSELGKIVAQHLM--ELEP 551
+ +++ + +A + W ++++ + H + E + Q + ELEP
Sbjct: 482 LMEAQNVFEG--TQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 227/482 (47%), Gaps = 16/482 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL S + ++ +IH+Q++ +G +D + +L + + + F GI
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLS-MYGKCGDLPRARQVFAGISPR 192
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D NT++ + L + +M ++ + + T+ L L EGK++
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLF-GQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H V+ G D+ V +L+ M CG+V A++ F+ D+V +N++I ++
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHN 311
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCM 291
A E + M + T+ S+++ +EA + + DV N +
Sbjct: 312 VEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNAL 371
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I YA+ G++ AR F M R+++SWN ++A Y R +D E +RL+ +M KP
Sbjct: 372 ISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGR 431
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ + +L+ACAN G+ IH I + IK + L+ +L+ MY +CG + A+NVF+
Sbjct: 432 VTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
++V+SWNSMI G+ HG E A ++F EM+ P++ TF VLS C + + G
Sbjct: 492 TQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELG 551
Query: 472 WWYFDLMQRIYK--IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ RI + ++ V ++++ R G ++D+ + L W A++
Sbjct: 552 K---QIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGG 607
Query: 530 CS 531
C+
Sbjct: 608 CA 609
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 14/284 (4%)
Query: 348 KPNE---ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+P E A+ +++L C ++ + IH+ + + + PD+ LS L+ MY KC +
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A VF M ++V+SWNS+I Y G +KA ++F EM+ G PN T+I +L+AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 465 AGMVLEG-WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL-PMEAGPAL 522
+ G + +++ Y+ +P+V++ ++ + G+ G + + ++ + + P +
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
L A + LG + Q E D Y+ L + + + DE + + ++ E
Sbjct: 199 TMLGLYAQKAYVKECLG-LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257
Query: 583 KELEK--AVGSSL----VHPGEFASESIVENCPPHRKCIVYSML 620
+ L VG++L V G+ S R +VY+ L
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNAL 301
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 260/423 (61%), Gaps = 1/423 (0%)
Query: 173 LREGKKVHAR-IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L+EG+ AR + E D+ ++I Y G + +AR +F++ P ++VTW +M+
Sbjct: 159 LQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVS 218
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
GY +N +V AR+LF+ MPER+ +W +M+ GY G M A+ LFD MP + VV N M
Sbjct: 219 GYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEM 278
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I G+ G V AR F M R+ +W+ ++ +Y R E L LF RM R N
Sbjct: 279 IMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNF 338
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
SL+SVL+ C ++ +D G+ +H+ + + D+ +++ L+TMY KCG + A+ VF+
Sbjct: 339 PSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNR 398
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
K+VV WNSMI GY HG GE+AL +F +M G P+D TFI VLSAC+++G V EG
Sbjct: 399 FPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEG 458
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F+ M+ Y++EP +EHY C+VDLLGRA + ++ +LV K+PME +WGALL AC
Sbjct: 459 LELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACR 518
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
TH +L ++ + L +LEP++ GPYVLLSN+YA +G+W +VE LR +K + + K G
Sbjct: 519 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGC 578
Query: 592 SLV 594
S +
Sbjct: 579 SWI 581
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 173/342 (50%), Gaps = 10/342 (2%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N LI + G + +AR+VF+ P ++V+W SM+ GYV+N +V A LF MP +++
Sbjct: 90 NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV 149
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W M+ G + G ++ A LFD+MP +DVV+ MI GY + G + AR FD M RN
Sbjct: 150 SWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRN 209
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+W +++ Y R +LF+ M + NE S ++L + G + + S
Sbjct: 210 VVTWTAMVSGYARNGKVDVARKLFEVM----PERNEVSWTAMLLGYTHSGRM---REASS 262
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+KP V++ ++ + G +D AR VF M E++ +W++MI Y G +
Sbjct: 263 LFDAMPVKP-VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELE 321
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL +F M++ G N + I VLS C + G + R + + + ++
Sbjct: 322 ALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVR-SEFDQDLYVASVLI 380
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ + G + ++++ ++ P++ +W ++++ S H E
Sbjct: 381 TMYVKCGNLVRAKQVFNRFPLK-DVVMWNSMITGYSQHGLGE 421
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 149/285 (52%), Gaps = 12/285 (4%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ Y + +A +FE P + V+WN +I G++KN + AR +FD MP+R++
Sbjct: 59 NAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVV 118
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W SM+ GYV GD+ A LF MP ++VVSW M+ G + G V AR FD M ++
Sbjct: 119 SWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKD 178
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+ ++ Y E LFD M K N + ++++ A G +D+ + +
Sbjct: 179 VVAVTNMIGGYCEEGRLDEARALFDEM----PKRNVVTWTAMVSGYARNGKVDVARKLFE 234
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ + + + T++L Y G M A ++FD M K VV N MIMG+G++G+ +K
Sbjct: 235 VMP----ERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDK 290
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
A +F M++R ++ T+ ++ G LE F MQR
Sbjct: 291 ARRVFKGMKER----DNGTWSAMIKVYERKGYELEALGLFRRMQR 331
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F G++E D + ++K + AL + +M + + N + + VC + S
Sbjct: 295 FKGMKERDNGTWSAMIKVYERKGYELEALGLF-RRMQREGLALNFPSLISVLSVCVSLAS 353
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L GK+VHA++V+ F+ DL+V + LI MY CG ++ A++VF P+ D+V WNSMI G
Sbjct: 354 LDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITG 413
Query: 233 YVKNREVGFARELFDFM-----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
Y ++ A +F M P D+ T+ ++S G ++ LF+ M + V
Sbjct: 414 YSQHGLGEEALNVFHDMCSSGVPPDDV-TFIGVLSACSYSGKVKEGLELFETMKCKYQVE 472
Query: 288 -----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ C++D + V A ++M M + + W LL
Sbjct: 473 PGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLG 515
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 389 STSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
S+ + YA+ G +D AR VFD + + V SWN+M+ Y Q +AL +F +M
Sbjct: 25 SSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM--- 81
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
P N ++ ++S GM+ E FD M + V + MV R G + +
Sbjct: 82 -PQRNTVSWNGLISGHIKNGMLSEARRVFDTMP-----DRNVVSWTSMVRGYVRNGDVAE 135
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI--- 563
+E L +P W +L + A+ L ++ P V ++N+
Sbjct: 136 AERLFWHMP-HKNVVSWTVMLGGLLQEGRVD----DARKLFDMMPEK--DVVAVTNMIGG 188
Query: 564 YASEGKWDEVENL 576
Y EG+ DE L
Sbjct: 189 YCEEGRLDEARAL 201
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 293/544 (53%), Gaps = 59/544 (10%)
Query: 58 HPILQKL-----ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
HP L +L E CS + Q+ L+ G SQ F A ++++ +L+ + +
Sbjct: 39 HPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYI 98
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + P+ F+ ++ ++ DP A Y + + N++ +P + + C +
Sbjct: 99 FDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLG 158
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
K VH +++K GF V+ +++ YS
Sbjct: 159 SNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRF--------------------------- 191
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
+ ++G AR++FD M ER + +W +MISGY +G+ ++A LF+ MP RDV +WN +I
Sbjct: 192 ---SSDIGSARQMFDEMLERTVVSWTAMISGYARLGNFDSAIELFESMPERDVPAWNALI 248
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
G A+ G A F RM +LLAL D + KPN+
Sbjct: 249 AGCAQNGFFCEAIWLFKRM---------VLLALEGNNNDR-------------ENKPNKT 286
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L S L+AC + G++ +G+WIH Y+ K D +S +LL MY KCG + +AR VFD +
Sbjct: 287 TLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMI 346
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK--RGPTPNDATFICVLSACTHAGMVLE 470
T KN+ SWNS+I +HG A+++F E+ G PN+ TF+ VL+ACTH G+V +
Sbjct: 347 TLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEK 406
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G+ YF++M+R Y IEP++EH+GC++DLLGRAG ++ E+V + +E +WG+LL+AC
Sbjct: 407 GYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNAC 466
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H S+L + + L+E++P++ G ++L+NIYA GKWDEV +RR++KEK K G
Sbjct: 467 KIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPG 526
Query: 591 SSLV 594
S +
Sbjct: 527 CSWI 530
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 316/581 (54%), Gaps = 45/581 (7%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQ-DSFAASRVL---KKLCTSLSSV 106
L I L+ + L + T + Q H ++++G + + ++L + +S
Sbjct: 17 LAIQMLAAKLTTILNNYLTANQAKQTHACIIINGFNNLEPLLVRQILLSARNNPRRISQY 76
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
S+L+ + PD+F ++ F AL Y + TF + +
Sbjct: 77 VHSILYH--LPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPS---TFAVSSAL 131
Query: 167 CAGIRSLRE--GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
A R+ + G +HA K GF ++V+ +L+ +YS G++ A+KVF++ ++V
Sbjct: 132 RAYARTTYKMGGMSIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVV 191
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+WNS++ G++K+ + A+ +FD + ++D+ +WNSMISGY +GDM+ A LF MP ++
Sbjct: 192 SWNSILSGHLKSGNLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRACVLFQQMPEKN 251
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
SWN +I GY G++ SA FD M RN VSW ++A Y +C D +LFD++ +
Sbjct: 252 YSSWNALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSASKLFDQIAK 311
Query: 345 GD---------------------------------AKPNEASLMSVLTACANMGVIDIGQ 371
D +P++ +L SV++AC+ +G +
Sbjct: 312 KDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACSQLGDLRFAS 371
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
WI SY+ + D L T+LL +YAKCG +D A +F + +K+VV++++MI G G++G
Sbjct: 372 WIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYSAMISGCGING 431
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ A+++F M PN ATF +L+AC HAG+V EG+ +F M+ + + P +HY
Sbjct: 432 KVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKD-HGLVPSTDHY 490
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
MVDLLGRAG ++D+ EL+ +PM+ +WGALL AC+ H+N ELG+I AQH LE
Sbjct: 491 AIMVDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIAAQHCFNLET 550
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
Y LL+NIY+S G+WD+V LR++ KEK+L K G S
Sbjct: 551 NATAYYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCS 591
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 303/538 (56%), Gaps = 40/538 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVS-GLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
L+ +K +++H++++++ L D A ++++ ++ S++ FD E +
Sbjct: 45 LDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAY-SAQGETSVARYIFDRSLEKNVV 103
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N +++S++ N ALS + + M++ +HYTFP + K C+G+ +LR G +VH
Sbjct: 104 FFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
IVK G + +LF+ N+L+ MY CG + +ARKV + P D+V+WNSM+ GY ++ + A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222
Query: 243 RELFDFMP----ERDIFTWNSM--ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
E+ M D T S+ + Y + +++ + +F+ M ++++SWN MI
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI---- 278
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
A+YV E + LF +M KP+ ++ S
Sbjct: 279 ---------------------------AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIAS 311
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L AC ++ + +G+ +H YI+K ++P++LL +LL MYAKCG ++ AR+VFD M ++
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRD 371
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VVSW SM+ YG GQG A+ +F +M G P+ F+ VLSAC+H G++ +G YF
Sbjct: 372 VVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFR 431
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
+M Y I P++EH+ CMVDL GRAG + ++ + ++PME +WGALLSAC HS
Sbjct: 432 MMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKM 491
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++G + A L +L P+ G YVLLSNIYA G W +V N+R MK+ ++K G S V
Sbjct: 492 DIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNV 549
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 260/433 (60%), Gaps = 1/433 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N +I Y+ G + +AR++FE+ P+ D+ W +M+ G+V+N + A +F+ MPE++
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEV 309
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MI+GYV +E A LFD MP R+ SWN M+ GYA+ GN+ A+ FD M R+
Sbjct: 310 SWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRD 369
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+SW +++ Y + E L LF +M R N ++L L++CA + +++G+ +H
Sbjct: 370 CISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHG 429
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ K + + +LL MY KCG ++ A +VF+++TEK++VSWN+MI GY HG G++
Sbjct: 430 RLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL +F M K P+D T + VLSAC+H G V +G YF+ M + Y I +HY CM+
Sbjct: 490 ALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMI 548
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLLGRAG + ++ L+ +P A WGALL A H ++ELG+ A+ + E+EP + G
Sbjct: 549 DLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSG 608
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
YVLLSN+YA+ G+W EV +R M++K ++K G S V V +C
Sbjct: 609 MYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAER 668
Query: 616 VYSMLGEIGAQMK 628
+Y+ L E+ ++K
Sbjct: 669 IYAYLEELDLELK 681
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 189/356 (53%), Gaps = 20/356 (5%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I Y + ARKVFE P DL++WN M+ GYVKN + AR LF+ MPE+D+
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+M+SG+ G +E A +FD M ++ +SWN ++ Y + G + AR FD
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE 214
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+VSWN L+ YVR K + LFDRM D + S ++T A G++ + +
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVRD----KISWNIMITGYAQNGLLSEARRL-- 268
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
++ I+ DV T++++ + + G++D A +F+ M EKN VSWN+MI GY Q EK
Sbjct: 269 -FEELPIR-DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A E+F +M P+ N +++ +++ G + + FD M + I + M+
Sbjct: 327 ARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS-----WAAMI 377
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGAL---LSACSTHSNSELGKIVAQHLME 548
++G ++ L K+ + G AL LS+C+ + ELGK + L++
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 223/474 (47%), Gaps = 68/474 (14%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D+ N+++ ++ G V +ARK+F+ V + ++WN ++ YV+N + AR LFD
Sbjct: 150 EKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS 209
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+ +I +WN ++ GYV ++ A LFD MP RD +SWN MI GYA+ G ++ AR F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ + +R+V +W +++ +V+ E R+F+ M + NE S +++ G +
Sbjct: 270 EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIA-----GYVQ 320
Query: 369 IGQWIHSYIQKCRIKPDVLLS------TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
Q I+K R D + S +++T YA+CG +D A+ +FD M +++ +SW +
Sbjct: 321 SQQ-----IEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAA 375
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT-----------HAGMVLEG 471
MI GY GQ E+AL +F++M++ G N + C LS+C H +V G
Sbjct: 376 MISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG 435
Query: 472 WWY---------------------FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ FD+ + I E + + M+ R G +++ L
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDI--TEKDIVSWNTMIAGYARHGFGKEALAL 493
Query: 511 VSKLPMEAGP---ALWGALLSACSTHSNSELGKIVAQHLMELE--PRDPGPYVLLSNIYA 565
+ M P L G +LSACS + G + + + Y + ++
Sbjct: 494 FESMKMTIKPDDVTLVG-VLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552
Query: 566 SEGKWDEVENLRRIM----KEKELEKAVGSSLVHP----GEFASESIVENCPPH 611
G+ DE NL + M +G+S +H GE A+E + E P +
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA I +L GK++H R+VK GF+ N+L+ MY CG + +A VFED D+V+W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 227 NSMIDGYVKNREVGFARE---LFDFMP---ERDIFTWNSMIS-----GYVDVGDMEAANG 275
N+MI GY ++ GF +E LF+ M + D T ++S G+VD G ME N
Sbjct: 475 NTMIAGYARH---GFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKG-MEYFNS 530
Query: 276 LFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
++ + + CMID + G + A N M + +W LL
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 308/573 (53%), Gaps = 33/573 (5%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+HT ++ SG + D S + + + ++ FD + E D N ++ +
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVG-MYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 186
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
P AL + E ++ F + + T + CA + L GK++H +V+ GF LD FV
Sbjct: 187 QPEKALELFEEMKVSGF-KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI- 254
++L+ MY CG + A++VFE ++V+WNSMI GY + ELF M E I
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305
Query: 255 ------------------FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
I GY+ +EA D+ + +ID Y
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEA-----------DIFVNSSLIDLYF 354
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K GN+ SA N F M NVVSWN++++ YV+ Y E L +F M + KP+ + S
Sbjct: 355 KCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTS 414
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL AC+ + V++ G+ IH++I + +++ + ++ +LL MYAKCG +D A ++F+ + E++
Sbjct: 415 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERD 474
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VSW SMI YG HGQ +AL++F +M++ P+ TF+ +LSAC+HAG+V EG +YF+
Sbjct: 475 FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFN 534
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP-MEAGPALWGALLSACSTHSN 535
M Y +P VEHY C++DLLGR G +R++ E++ + P + L L SAC H
Sbjct: 535 QMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKK 594
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+LG+ + + L+E +P DP Y++LSN+YAS KWDEV +R +KE L+K G S +
Sbjct: 595 LDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIE 654
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G+ +VE+ + ++Y + + + ++
Sbjct: 655 VGKRIHPFVVEDKSHPQADMIYECMSILASHVE 687
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 259/501 (51%), Gaps = 39/501 (7%)
Query: 60 ILQKLESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
+L L++C K Q IH +++ GL Q++ + L L S + L F I
Sbjct: 6 LLSLLKTCIDSKYLKQGKLIHQKIVSLGL-QNNITLCKSLINLYFSCHLFQSAKLVFQTI 64
Query: 117 QEP-DAFMCNTIM----KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
+ P D + N +M K+F+ + L ++ + +++ + +T+P + K C+G+
Sbjct: 65 ENPLDITLWNGLMAACTKNFIFIE----GLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+ GK VH ++K GF +D+ V +S + MY+ C DA K+F++ P D+ +WN++I
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 232 GYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGL--------FDL 279
Y ++ + A ELF+ M + D T ++IS + D+E + F L
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
F + ++D Y K G + A+ F+++ +NVVSWN ++A Y D C+ LF
Sbjct: 241 DGFVS----SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELF 296
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
RM +P +L S+L AC+ + +G++IH YI + R++ D+ +++SL+ +Y KC
Sbjct: 297 RRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKC 356
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + A NVF NM + NVVSWN MI GY G +AL +F +M K G P+ TF VL
Sbjct: 357 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 416
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVE----HYGCMVDLLGRAGLMRDSEELVSKLP 515
AC+ ++ +G + + IE K+E G ++D+ + G + ++ + ++LP
Sbjct: 417 PACSQLAVLEKGKEIHNFI-----IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 471
Query: 516 MEAGPALWGALLSACSTHSNS 536
E W ++++A +H +
Sbjct: 472 -ERDFVSWTSMIAAYGSHGQA 491
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 38/269 (14%)
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVIDIGQWI 373
++ WN L+A + + E L +F R++ KP+ + SVL AC+ +G + G+ +
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H+++ K DV++ +S + MYAKC V + A +FD M E++V SWN++I Y GQ
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG-WWYFDLMQRIYKIEPKVEHYG 492
EKALE+F EM+ G P+ T V+S+C + G + +L++ + ++ V
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS--S 246
Query: 493 CMVDLLGRAGLMRDSEELVSKL---------PMEAGPALWG------------------- 524
+VD+ G+ G + ++E+ ++ M AG +L G
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306
Query: 525 ------ALLSACSTHSNSELGKIVAQHLM 547
++L ACS N +LGK + +++
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYII 335
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 307/560 (54%), Gaps = 24/560 (4%)
Query: 58 HP--ILQKLESCSTVKEFHQIHTQLLVSGLSQDS--FAASRVLKKLCTSL--SSVSLSVL 111
HP IL L C T+ +F H +L + + ++ S+++ S + + L
Sbjct: 3 HPNTILSLLPKCKTLLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANL 62
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F I P+ ++ N+++K + N+P +L Y ++M+ +H+TFP + K C+ I
Sbjct: 63 LFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLY-KQMLQNGYSPDHFTFPFVLKACSFIY 121
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
GK VH+ I+K GFE +++V L++MY C + KVF+ P W++V W +I+
Sbjct: 122 DQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLIN 181
Query: 232 GYVKNREVGFARELFDFM-----PERDIFTWNSMISGY----VDVGD------MEAANGL 276
GYV N + A E+F M ++ N++I+ VD G +A
Sbjct: 182 GYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDP 241
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
F +V+ +++ YAK G + AR F++M RN+V+WN ++ Y + + Y E L
Sbjct: 242 FVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEAL 301
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF M+ P++A+ +SVL+ CA V+ +G+ +H+Y+ K + D+ L+T+LL MY
Sbjct: 302 GLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMY 361
Query: 397 AKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDAT 454
AK G + A+ +F+N EK +VV W SMI +HG G +AL +F M E P+ T
Sbjct: 362 AKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHIT 421
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+I VL AC+H G+V E F+LM + Y I P+ EHY CMVDLL RAG R++E+L+ +
Sbjct: 422 YIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETM 481
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
+ A+WGALL+ C H N + V L ELEP G Y LLSNIYA+ GKW+EV
Sbjct: 482 SIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEEVN 541
Query: 575 NLRRIMKEKELEKAVGSSLV 594
R++MK K + K +G S V
Sbjct: 542 RTRKMMKHKRIAKTIGHSSV 561
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 276/485 (56%), Gaps = 45/485 (9%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV--CGEVLDARKVFE 216
T LL + C+ + LR+ +H +++K G LD + L+ + G + AR VF+
Sbjct: 21 TLHLLQR-CSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFD 76
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFM-----PER------------------- 252
+ WN+MI GY ++E A L+ M P
Sbjct: 77 RIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEE 136
Query: 253 ---------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
+I+T NS+++ Y GD+++A LFD + RD VSWN MIDGY K
Sbjct: 137 TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G + A F+ M RN++SW +++ V E L LF RM K + +L+S
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVST 256
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
L ACA++GV+D G+WIH+YI+K I+ D +L L+ MYAKCG ++ A VF M EK V
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
W +MI GY +HG+G +ALE FM+M+ G PN TF +L+AC+HAG+V E F+
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFES 376
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M+RI+ +P +EHYGCMVDLLGRAGL++++EEL+ +P++ A+WGALL+AC H N E
Sbjct: 377 MERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 436
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
LGK + + L++++P G Y+ L++I+A+ G+W++ +RR MKE+ + K G S++
Sbjct: 437 LGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVN 496
Query: 598 EFASE 602
A E
Sbjct: 497 GTAHE 501
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 207/417 (49%), Gaps = 45/417 (10%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV--LFFDGIQE 118
L L+ CS ++E QIH Q+L +GL D AS++L C S +S SL+ FD I
Sbjct: 22 LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLA-FCASPNSGSLAYARTVFDRIFR 80
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P+ FM NT+++ + +P AL Y+ M+ V HN YTFP L K C+ + +L E ++
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHH-MLYHSVPHNAYTFPFLLKACSSMSALEETQQ 139
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HA I+K GF +++ NSL+++YS G++ AR +F+ D V+WNSMIDGY K E
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----------------- 281
+ A E+F+ MPER+I +W SMISG V G + A LF M
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 282 -----FRDVVSW----------------NC-MIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
D W C +ID YAK G++ A F +M + V W
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+++ Y E L F +M +PN+ + +LTAC++ G++ + + +++
Sbjct: 320 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 379
Query: 380 CR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGE 434
KP + ++ + + G++ A + +NM K N W +++ +HG E
Sbjct: 380 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 436
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 49/308 (15%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ S S ++E QIH ++ G + + + +L S + + L FD + +
Sbjct: 124 LLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKS-GDIKSARLLFDQVDQR 182
Query: 120 DAFMCNTIMKSFLMLND-------------------------------PFGALSFYYEKM 148
D N+++ + + P AL+ ++ +M
Sbjct: 183 DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH-RM 241
Query: 149 MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
++ ++ + CA + L +GK +HA I K E+D + LI MY+ CG++
Sbjct: 242 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDL 301
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD-FMP------ERDIFTWNSMI 261
+A +VF + W +MI GY + G RE + FM E + T+ ++
Sbjct: 302 EEAIEVFRKMEEKGVSVWTAMISGYAIH---GRGREALEWFMKMQTAGVEPNQMTFTGIL 358
Query: 262 SGYVDVGDMEAANGLFDLMP----FR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-N 315
+ G + A LF+ M F+ + + CM+D + G + A + M ++ N
Sbjct: 359 TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 316 VVSWNILL 323
W LL
Sbjct: 419 AAIWGALL 426
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA--KCGVMD 403
++ N A + +L C+NM + + IH + K + D + ++ LL A G +
Sbjct: 13 SSESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLA 69
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD + N WN+MI GY + E+AL ++ M N TF +L AC+
Sbjct: 70 YARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACS 129
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 276/485 (56%), Gaps = 45/485 (9%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV--CGEVLDARKVFE 216
T LL + C+ + LR+ +H +++K G LD + L+ + G + AR VF+
Sbjct: 21 TLHLLQR-CSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFD 76
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFM-----PER------------------- 252
+ WN+MI GY ++E A L+ M P
Sbjct: 77 RIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEE 136
Query: 253 ---------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
+I+T NS+++ Y GD+++A LFD + RD VSWN MIDGY K
Sbjct: 137 TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G + A F+ M RN++SW +++ V E L LF RM K + +L+S
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVST 256
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
L ACA++GV+D G+WIH+YI+K I+ D +L L+ MYAKCG ++ A VF M EK V
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
W +MI GY +HG+G +ALE FM+M+ G PN TF +L+AC+HAG+V E F+
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFES 376
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M+RI+ +P +EHYGCMVDLLGRAGL++++EEL+ +P++ A+WGALL+AC H N E
Sbjct: 377 MERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 436
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
LGK + + L++++P G Y+ L++I+A+ G+W++ +RR MKE+ + K G S++
Sbjct: 437 LGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVN 496
Query: 598 EFASE 602
A E
Sbjct: 497 GTAHE 501
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 206/417 (49%), Gaps = 45/417 (10%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV--LFFDGIQE 118
L L+ CS ++E QIH Q+L +GL D AS++L C S +S SL+ FD I
Sbjct: 22 LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLA-FCASPNSGSLAYARTVFDRIFR 80
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P+ FM NT+++ + +P AL Y+ M+ V HN YTFP L K C+ + + E ++
Sbjct: 81 PNTFMWNTMIRGYSNSKEPEEALLLYHH-MLYHSVPHNAYTFPFLLKACSSMSASEETQQ 139
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HA I+K GF +++ NSL+++YS G++ AR +F+ D V+WNSMIDGY K E
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----------------- 281
+ A E+F+ MPER+I +W SMISG V G + A LF M
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 282 -----FRDVVSW----------------NC-MIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
D W C +ID YAK G++ A F +M + V W
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+++ Y E L F +M +PN+ + +LTAC++ G++ + + +++
Sbjct: 320 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 379
Query: 380 CR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGE 434
KP + ++ + + G++ A + +NM K N W +++ +HG E
Sbjct: 380 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 436
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 124/308 (40%), Gaps = 49/308 (15%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ S S +E QIH ++ G + + + +L S + + L FD + +
Sbjct: 124 LLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKS-GDIKSARLLFDQVDQR 182
Query: 120 DAFMCNTIMKSFLMLND-------------------------------PFGALSFYYEKM 148
D N+++ + + P AL+ ++ +M
Sbjct: 183 DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH-RM 241
Query: 149 MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
++ ++ + CA + L +GK +HA I K E+D + LI MY+ CG++
Sbjct: 242 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDL 301
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD-FMP------ERDIFTWNSMI 261
+A +VF + W +MI GY + G RE + FM E + T+ ++
Sbjct: 302 EEAIEVFRKMEEKGVSVWTAMISGYAIH---GRGREALEWFMKMQTAGVEPNQMTFTGIL 358
Query: 262 SGYVDVGDMEAANGLFDLMP----FR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-N 315
+ G + A LF+ M F+ + + CM+D + G + A + M ++ N
Sbjct: 359 TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 316 VVSWNILL 323
W LL
Sbjct: 419 AAIWGALL 426
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA--KCGVMD 403
++ N A + +L C+NM + + IH + K + D + ++ LL A G +
Sbjct: 13 SSESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLA 69
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD + N WN+MI GY + E+AL ++ M N TF +L AC+
Sbjct: 70 YARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACS 129
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 303/538 (56%), Gaps = 40/538 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVS-GLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
L+ +K +++H++++++ L D A ++++ ++ S++ FD E +
Sbjct: 45 LDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAY-SAQGETSVARYIFDRSLEKNVV 103
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N +++S++ N ALS + + M++ +HYTFP + K C+G+ +LR G +VH
Sbjct: 104 FFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
IVK G + +LF+ N+L+ MY CG + +ARKV + P D+V+WNSM+ GY ++ + A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222
Query: 243 RELFDFMP----ERDIFTWNSM--ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
E+ M D T S+ + Y + +++ + +F+ M ++++SWN MI
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI---- 278
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
A+YV E + LF +M KP+ ++ S
Sbjct: 279 ---------------------------AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIAS 311
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L AC ++ + +G+ +H YI+K ++P++LL +LL MYAKCG ++ AR+VFD M ++
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRD 371
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VVSW SM+ YG GQG A+ +F +M G P+ F+ VLSAC+H G++ +G YF
Sbjct: 372 VVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFR 431
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
+M Y I P++EH+ CMVDL GRAG + ++ + ++PME +WGALLSAC HS
Sbjct: 432 MMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKM 491
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++G + A L +L P+ G YVLLSNIYA G W +V N+R MK+ ++K G S V
Sbjct: 492 DIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNV 549
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 314/570 (55%), Gaps = 56/570 (9%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDGIQEP 119
L ++CS +E Q+H L + + F +SR+L ++ + + FD IQ
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 79
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
NTI+K ++ + ++E ++ +++ N +T P + K CA + ++EGK++
Sbjct: 80 SLIHWNTIIKCYVENQFSHDGIVLFHE-LVHEYLPDN-FTLPCVIKGCARLGVVQEGKQI 137
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +K GF D+FV+ SL++MYS CGE +
Sbjct: 138 HGLALKIGFGSDVFVQGSLVNMYSKCGE-------------------------------I 166
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR++FD M ++D+ WNS+I G ++VSWN MI+GY K G
Sbjct: 167 DCARKVFDGMIDKDVVLWNSLIDG--------------------NLVSWNAMINGYMKSG 206
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ SA F +M + ++V+WN+++A Y + + +++F M++ ++P+ A+L+SVL+
Sbjct: 207 DFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 266
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A + + V+ G+WIHSY++K + D +L TSL+ MYAKCG ++ A VF + +K V
Sbjct: 267 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 326
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W ++I+G G+HG AL +F+EM K G PN FI VL+AC HAG+V +G YFD+M
Sbjct: 327 WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 386
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
YKIEP +EHYGC+VD+L RAG + +++ + +P+ +W +LL H ++G
Sbjct: 387 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIG 446
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGE 598
+ AQ ++E+ P G Y+LLSN+YA+ G W++V ++R +M ++ K G SS+ H G
Sbjct: 447 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGT 506
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ + P K I Y+ + E+ ++K
Sbjct: 507 LHEFIVGDISHPQTKEI-YAKMSEMKEKLK 535
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 238/376 (63%), Gaps = 2/376 (0%)
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
++V W SMI+GY+ N+++ AR FD PERDI WN+MISGY+++G+M A LFD MP
Sbjct: 5 NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP 64
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
RDV+SWN +++GYA IG++ + FD M RNV SWN L+ Y + E L F R
Sbjct: 65 CRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 124
Query: 342 MI-RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI-KPDVLLSTSLLTMYAKC 399
M+ G PN+A++ VL+ACA +G D G+W+H Y + K DV + +L+ MY KC
Sbjct: 125 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKC 184
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +++A VF + ++++SWN+MI G HG G +AL +F EM+ G +P+ TF+ VL
Sbjct: 185 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 244
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
AC H G+V +G YF+ M + I P++EH GC+VDLL RAG + + E ++K+P++A
Sbjct: 245 CACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKAD 304
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+W LL A + ++G++ + L++LEPR+P +V+LSNIY G++D+ L+
Sbjct: 305 AVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVA 364
Query: 580 MKEKELEKAVGSSLVH 595
M++ +K G S +
Sbjct: 365 MRDTGFKKEAGVSWIE 380
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 19/227 (8%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + F N ++K + L + + V N T L+ CA + +
Sbjct: 91 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 150
Query: 173 LREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
GK VH G+ ++D+ V+N+LI MY CG + A +VF+ DL++WN+MI+
Sbjct: 151 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 210
Query: 232 GYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGL---------FD 278
G + A LF M D T+ ++ +G +E +GL F
Sbjct: 211 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVE--DGLAYFNSMFTDFS 268
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+MP ++ C++D ++ G +T A ++M ++ + V W LL
Sbjct: 269 IMP--EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 313
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 320/651 (49%), Gaps = 91/651 (13%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASR--VLKKLCTSLSSVSLSVLFFDGIQE 118
L++CS VK+ Q+H ++VSG D F A+ V+ C S FD I E
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD---SKRLFDEIPE 220
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
+ N + ++ + A+ +YE M+ ++ N ++ + C G+R GK
Sbjct: 221 RNVVSWNALFSCYVQXDFCGEAVGLFYE-MVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H ++K G++ D F N+L+ MY+ G++ DA VFE D+V+WN++I G V +
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339
Query: 239 -------------------------------VGF------------ARELFDFMPERDIF 255
VG AR F+ +PE+D+
Sbjct: 340 HEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 399
Query: 256 TWNSMISGYVDV-GDMEA-------------------------------------ANGLF 277
WN++ISGY DMEA +GL
Sbjct: 400 AWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLS 459
Query: 278 DLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
F D+ N +ID Y K +V A F+ + ++VS+ ++ Y + E L
Sbjct: 460 VKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEAL 519
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
+LF M + KP+ S+L ACAN+ + G+ +H +I K D+ SL+ MY
Sbjct: 520 KLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMY 579
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
AKCG +D A F +TE+ +VSW++MI G HG G +AL++F +M K G +PN T +
Sbjct: 580 AKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLV 639
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VL AC HAG+V E YF+ M+ ++ +P EHY CM+DLLGRAG + ++ ELV+K+P
Sbjct: 640 SVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPF 699
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
EA ++WGALL A H + ELG+ A+ L LEP G +VLL+NIYAS GKW+ V +
Sbjct: 700 EANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEV 759
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
RR+M++ +++K G S + + +V + +R +Y+ L E+ M
Sbjct: 760 RRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLM 810
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 157/619 (25%), Positives = 274/619 (44%), Gaps = 110/619 (17%)
Query: 16 SLDKFIKSQKNLPKTP-PKLWANEPKPKFTDTDNQRLPIVDL---------SHPILQKLE 65
S K + + +LP P PKL + P+F++ D Q I++L S + L
Sbjct: 8 SFQKPLHQRLHLPFKPAPKLI--QTVPQFSE-DPQTTAILNLIDKGNFTPTSVSYSKLLS 64
Query: 66 SCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
C T K QIH + SGLS D + ++ L + + D EPD
Sbjct: 65 QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLIN-LYSKCRXFGYARKLVDESSEPDLV 123
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ ++ + GAL ++E M V+ N +TF + K C+ ++ LR GK+VH
Sbjct: 124 SWSALISGYAQNGLGGGALMAFHE-MHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGV 182
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+V GFE D+FV N+L+ MY+ C E LD++++F++ P ++V+WN++ YV+ G A
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEA 242
Query: 243 RELFDFM------PER---------------------------------DIFTWNSMISG 263
LF M P D F+ N+++
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDM 302
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDG----------------------------- 294
Y VGD+ A +F+ + D+VSWN +I G
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMD 362
Query: 295 --------------YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
Y+K + AR F+ + +++++WN +++ Y + + E L LF
Sbjct: 363 MESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFV 422
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M + N+ +L ++L + A + V+ + + +H K D+ + SL+ Y KC
Sbjct: 423 EMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCS 482
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC--V 458
++ A +F+ T ++VS+ SMI Y +GQGE+AL++F+EM+ P+ F+C +
Sbjct: 483 HVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD--RFVCSSL 540
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG--CMVDLLGRAGLMRDSEELVSKLPM 516
L+AC + +G L I K ++ + +V++ + G + D+ S+L
Sbjct: 541 LNACANLSAFEQGK---QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT- 596
Query: 517 EAGPALWGALLSACSTHSN 535
E G W A++ + H +
Sbjct: 597 ERGIVSWSAMIGGLAQHGH 615
>gi|225430506|ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 517
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 174/471 (36%), Positives = 273/471 (57%), Gaps = 2/471 (0%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N ++K + +P A+ Y E F + +++TFP+L K + + S G +H + +
Sbjct: 23 NKVIKRRVSQGNPDQAILAYVEMKRVGF-DADNFTFPVLLKAASSLSSCCIGFALHGQAM 81
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K GF FV +L+ MYS G + A KVFE+ V D+V WNSM+ Y ++ A +
Sbjct: 82 KTGFSGHCFVGTALLDMYSAFGAIDHATKVFEEMGVKDVVVWNSMLAAYASCGQMDNAMK 141
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
LFD MP +D+ ++N MISGY +G AA +FD + +D+VSWN MI +G++ +A
Sbjct: 142 LFDNMPLKDLASFNIMISGYAKIGKKAAARSIFDRIHAKDIVSWNSMILACTNVGDMGNA 201
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
RN FD M +NV++WN +++ Y+ + Y E + LFD M G+ + + ++ VL+ACA++
Sbjct: 202 RNLFDVMPKKNVITWNTMISGYLHAQLYAEAVDLFDEMKAGNHEADHLTVTLVLSACAHL 261
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G + G +H Y Q R+ ++TSL+ MYAKCG + + VF K++ WN++I
Sbjct: 262 GWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDIYCWNAII 321
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
G +HG G A+++ +M G P++ TFI +LSAC+H +V EG FD M++ + +
Sbjct: 322 SGLALHGYGHAAVKLLDKMRDNGVRPDEITFIGLLSACSHRSLVQEGCRLFDCMEKEFGL 381
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG-KIVA 543
PK+EHYGCMVDLLGRAG + + +L+ +P E G ++ GALL AC H + E G K++
Sbjct: 382 PPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKVIN 441
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ G +++ N+YAS G+W E R M E + K G S +
Sbjct: 442 LITSKAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTI 492
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 273/461 (59%), Gaps = 29/461 (6%)
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
+++ Y ++ DA K+F + P ++V+WN+MIDGY +N + A LF+ MPER++ +
Sbjct: 135 AMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVS 194
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSW--------------------------NC 290
WN+++S G +E A LFD MP RDV+SW N
Sbjct: 195 WNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFERMPERDLPSWNT 254
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKP 349
MI G + G++ AR F+ M +NV+SW ++ V+ + E L++F RM+ + AKP
Sbjct: 255 MITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKP 314
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
N+ + +SVL AC+N+ + GQ +H I K + + ++L+ MY+KCG + AR +F
Sbjct: 315 NQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMF 374
Query: 410 DN--MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
D+ +++++VSWN +I Y HG G++A+ F EM K G P+D T++ +LSAC+HAG+
Sbjct: 375 DDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGL 434
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG YFD + + I + +HY C+VDL GRAG ++++ + +L + +WGALL
Sbjct: 435 VEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALL 494
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+ C+ H+N ++GK A+ L+E+EP + G Y+LLSNIYAS GKW E +R MK+K L+K
Sbjct: 495 AGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKK 554
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G S + G +V + + ++YS+L ++ ++MK
Sbjct: 555 QPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMK 595
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 30/299 (10%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM-PERDI 254
N +I S G +++AR++F++ D++TW ++I GY+K + AR LFD + ++++
Sbjct: 71 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 130
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
TW +M+ GY+ + A LF+ MP ++VVSWN MIDGYA+ G + SA F++M R
Sbjct: 131 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPER 190
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN----MGVIDIG 370
NVVSWN ++++ +C E RLFDRM D A + +L + M D+
Sbjct: 191 NVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFERMPERDLP 250
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
W +++T + G + AR +F+ M +KNV+SW +MI G
Sbjct: 251 SW-----------------NTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQE 293
Query: 431 GQGEKALEMFMEM-EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
G+ E+AL++F M G PN TF+ VL AC++ + EG Q++++I K
Sbjct: 294 GESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEG-------QQVHQIISKT 345
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 164/392 (41%), Gaps = 71/392 (18%)
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
DF + ++ N MI+ G + A LFD M DV++W +I GY K G + AR
Sbjct: 60 DFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARR 119
Query: 307 CFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FDR+ +NVV+W ++ Y+R + +LF+ M N S +++ A G
Sbjct: 120 LFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM----PNKNVVSWNTMIDGYAQNG 175
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
ID ++ + + +V+ ++++M A+CG ++ AR +FD M E++V+SW +MI
Sbjct: 176 RIDSAMYLFEKMP----ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIA 231
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
G ++AL++F M +R L W
Sbjct: 232 GL-----LDEALDLFERMPERD---------------------LPSW------------- 252
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
M+ L + G +R + +L +++P + W +++ C SE +
Sbjct: 253 ------NTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTMITGCVQEGESEEALKIFSR 305
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
++ P +S + A NL + + +++ + + ++ F +++
Sbjct: 306 MLSTNGAKPNQGTFVSVLGA-------CSNLAGLGEGQQVHQIISKTVYQDSTFVVSALI 358
Query: 606 ENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQ 637
+YS GE+G KM + SQ
Sbjct: 359 N---------MYSKCGELGTARKMFDDGMTSQ 381
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
AL + + + N TF + C+ + L EG++VH I K ++ FV ++LI
Sbjct: 299 ALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALI 358
Query: 200 HMYSVCGEVLDARKVFEDGPV--WDLVTWNSMIDGYVKNREVGFARELFDFMPER----- 252
+MYS CGE+ ARK+F+DG DLV+WN +I Y + G+ +E +F E
Sbjct: 359 NMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHH---GYGKEAINFFKEMRKSGF 415
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFD-LMPFRDVV----SWNCMIDGYAKIGNVTSAR 305
D T+ ++S G +E FD L+ R ++ + C++D + G + A
Sbjct: 416 KPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAF 475
Query: 306 NCFDRMCMR-NVVSWNILLA 324
+R+ + + W LLA
Sbjct: 476 GFIERLETKPSARVWGALLA 495
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 313/572 (54%), Gaps = 23/572 (4%)
Query: 75 QIHTQLLVSGL--SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF- 131
QIH +L S + ++ SR+L++ CT+ + + IQ P + ++++ F
Sbjct: 20 QIHCLVLTSPIFYTRRDLFLSRLLRR-CTAATQFRYARRLLCQIQTPSIQLWDSLVGHFS 78
Query: 132 --LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK--KVHARIVKCG 187
+ LN LS Y +M V + +TFP L K + LR+ + HA I+K G
Sbjct: 79 GRVTLNRRLSFLS--YRQMRRNGVVPSRHTFPPLLK---AVFKLRDANPFQFHAHILKFG 133
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
F+ DLFVRNSLI YS CG +VF+ D+V+W +MIDG+V+N A F
Sbjct: 134 FDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFV 193
Query: 248 FMPERDI----FTWNSMISGYVDVGDMEAANGL--FDLMPFR---DVVSWNCMIDGYAKI 298
M + T S++ D+ + F L R DV + ++D Y K
Sbjct: 194 EMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKC 253
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G A+ FD M RNVV+W L+A YV+ + + + + +F+ M++ D PNE +L SVL
Sbjct: 254 GCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVL 313
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+ACA++G + G+ +H Y+ K I+ + + T+L+ YAKCG ++ A VF+ + EKNV
Sbjct: 314 SACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVY 373
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+W +MI G+ HG A+++F M +PN+ TFI VLSAC H G+V EG F M
Sbjct: 374 TWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSM 433
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ + +EPK +HY CMVDL GR GL+ +++ L+ ++PME A+WGAL +C H + EL
Sbjct: 434 KERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYEL 493
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PG 597
GK A +++L+P G Y LL+N+Y+ WD+V +R+ MK++++ K+ G S + G
Sbjct: 494 GKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKG 553
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+ ++ P +Y L +G QM++
Sbjct: 554 KLHEFIAFDDKKPLESDDLYKTLDNVGVQMRL 585
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 243/377 (64%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
DI ++I Y G + A LFD + FRDV WN M+ GYAK+G+V +AR+ F+RM
Sbjct: 173 DIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMP 232
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RNV+SW ++A Y + E + +F RM + +P+E ++++ L+ACA++G +++G+W
Sbjct: 233 ERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEW 292
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IH+YI K + V L+ +L+ MYAKCG ++ A VF NM K+V++W SMI G +HG
Sbjct: 293 IHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGL 352
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G +ALEMF ME+ PN+ TF+ +LSAC H G+V G WYF M Y I+PK++HYG
Sbjct: 353 GREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYG 412
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DLLGRAG +++++ELV +P EA +WG+LL+A H ++ELGK QHL+++EP
Sbjct: 413 CMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPH 472
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+ G Y LLSNIYA++ KW+E +R++M++ ++K G S + E + + +
Sbjct: 473 NSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVAGDKLHPQ 532
Query: 613 KCIVYSMLGEIGAQMKM 629
++ +L +I Q K+
Sbjct: 533 SERIFEVLCKINLQSKI 549
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 213/437 (48%), Gaps = 56/437 (12%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S+ +L L+ CS +K HQ H +L GL QD+ SR ++ C+SL S F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEA-CSSLGFSHYSHSIFTHK 99
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALS--FYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
PD ++ NTI+K+ L++P A Y +++A + + Y+ P + K + ++
Sbjct: 100 TRPDIYLYNTIIKA---LSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIH 156
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+++H + + G D+ V +LI MYS CG V +AR++F+ D+ WN+M+ GY
Sbjct: 157 VGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYA 216
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV-------- 286
K +V AR LF+ MPER++ +W ++I+GY + A +F M +V
Sbjct: 217 KVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLA 276
Query: 287 --------------SW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
W N +ID YAK G + A F M ++
Sbjct: 277 ALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKS 336
Query: 316 VVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
V++W + LAL+ + E L +F M R KPNE + +++L+AC ++G++++G+W
Sbjct: 337 VITWTSMIDGLALHGLGR---EALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRW 393
Query: 373 IHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMH 430
+ K IKP + ++ + + G + A+ + M E N W S++ +H
Sbjct: 394 YFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIH 453
Query: 431 GQ---GEKALEMFMEME 444
G G++AL+ +++E
Sbjct: 454 GDAELGKQALQHLIKVE 470
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 299/541 (55%), Gaps = 24/541 (4%)
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+L+ LF + + D F N+++ D AL + M + +FP K
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEAL-LAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + + GK+ H + G++ D+FV ++LI MYS CG++ DARKVF++ P D+V+W
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSW 145
Query: 227 NSMIDGYVKNREVGFARELF-----DFMPERDIFTWNSMISGYVDV----------GDME 271
SMI GY N A LF D + D +SM G V V G E
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM--GLVSVISACSRVPAKGLTE 203
Query: 272 AANGLFDLMPF-RDVVSWNCMIDGYAK--IGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+ + F R V N ++D YAK G V AR FD++ ++ VS+N ++++Y +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 329 CKDYCECLRLFDRMIRGDAKP-NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
E +F R+++ N +L +VL A ++ G + IG+ IH + + ++ DV+
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+ TS++ MY KCG ++ AR FD M KNV SW +MI GYGMHG KALE+F M G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN TF+ VL+AC+HAG+ +EGW +F+ M+ + +EP +EHYGCMVDLLGRAG ++ +
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+L+ ++ M+ +W +LL+AC H N EL +I L EL+ + G Y+LLS+IYA
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADA 503
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQ 626
G+W +VE +R IMK + L K G SL+ GE I + P R+ I Y L E+ +
Sbjct: 504 GRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKI-YEFLAELNRK 562
Query: 627 M 627
+
Sbjct: 563 L 563
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V+++ FD I + D N+IM + A + + K V N T +
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
+ +LR GK +H ++++ G E D+ V S+I MY CG V ARK F+ ++ +
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGD-------MEAAN 274
W +MI GY + A ELF M + + T+ S+++ G A
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
G F + P + + CM+D + G + A + RM M+ + + W+ LLA
Sbjct: 416 GRFGVEP--GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 204/655 (31%), Positives = 327/655 (49%), Gaps = 85/655 (12%)
Query: 56 LSHPILQKLESCSTVK----EFHQIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLS 109
+S P + L+SC +K + +H ++ SG S + F +R++ C SL
Sbjct: 18 VSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLED---G 74
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH---- 155
FD + + + F N+++ L A S + + M++ F +H
Sbjct: 75 RQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 156 ----------------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
N YTF C+G+ + G ++H+ I K D+++ ++L+
Sbjct: 135 EALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALV 194
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-------- 251
MYS CG V DA++VF++ ++V+WNS+I Y +N A ++F M E
Sbjct: 195 DMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEV 254
Query: 252 --------------------------------RDIFTWNSMISGYVDVGDMEAANGLFDL 279
DI N+ + Y ++ A +FD
Sbjct: 255 TLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
MP R+V++ M+ GYA + +AR F +M RNVVSWN L+A Y + + E L LF
Sbjct: 315 MPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLL 393
+ R P + ++L ACA++ + +G H ++ K K D+ + SL+
Sbjct: 375 CLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY KCG ++ VF M E++ VSWN+MI+G+ +G G +ALE+F EM G P+
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHI 494
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
T I VLSAC HAG V EG YF M R + + P +HY CMVDLLGRAG + +++ ++ +
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEE 554
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P++ +WG+LL+AC H N LGK VA+ L E+E + GPYVLLSN+YA GKW +
Sbjct: 555 MPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDA 614
Query: 574 ENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
N+R++M+++ + K G S + A +V++ RK ++S+L + A+M+
Sbjct: 615 MNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 230/342 (67%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
DI ++I Y G + A LFD + FRDV WN M+ GYAK+G+V +AR+ F+RM
Sbjct: 173 DIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMP 232
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RNV+SW ++A Y + E + +F RM + +P+E ++++ L+ACA++G +++G+W
Sbjct: 233 ERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEW 292
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IH+YI K + V L+ +L+ MYAKCG ++ A VF NM K+V++W SMI G +HG
Sbjct: 293 IHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGL 352
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G +ALEMF ME+ PN+ TF+ +LSAC H G+V G WYF M Y I+PK++HYG
Sbjct: 353 GREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYG 412
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DLLGRAG +++++ELV +P EA +WG+LL+A H ++ELGK QHL+++EP
Sbjct: 413 CMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPH 472
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ G Y LLSNIYA++ KW+E +R++M++ ++K G S +
Sbjct: 473 NSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCI 514
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 213/437 (48%), Gaps = 56/437 (12%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S+ +L L+ CS +K HQ H +L GL QD+ SR ++ C+SL S F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEA-CSSLGFSHYSHSIFTHK 99
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALS--FYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
PD ++ NTI+K+ L++P A Y +++A + + Y+ P + K + ++
Sbjct: 100 TRPDIYLYNTIIKA---LSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIH 156
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+++H + + G D+ V +LI MYS CG V +AR++F+ D+ WN+M+ GY
Sbjct: 157 VGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYA 216
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV-------- 286
K +V AR LF+ MPER++ +W ++I+GY + A +F M +V
Sbjct: 217 KVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLA 276
Query: 287 --------------SW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
W N +ID YAK G + A F M ++
Sbjct: 277 ALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKS 336
Query: 316 VVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
V++W + LAL+ + E L +F M R KPNE + +++L+AC ++G++++G+W
Sbjct: 337 VITWTSMIDGLALHGLGR---EALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRW 393
Query: 373 IHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMH 430
+ K IKP + ++ + + G + A+ + M E N W S++ +H
Sbjct: 394 YFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIH 453
Query: 431 GQ---GEKALEMFMEME 444
G G++AL+ +++E
Sbjct: 454 GDAELGKQALQHLIKVE 470
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 273/466 (58%), Gaps = 39/466 (8%)
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV---------------- 204
PLLG R G +VHA+ V+ GF D+FV N+L+ MY
Sbjct: 99 PLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAG 158
Query: 205 ----------------CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
CGE+ A++VF++ P + V+W++M+ GY E+ ARE+FD
Sbjct: 159 VADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDR 218
Query: 249 MPE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
MP R++ TWNSM++G+ G + A +FD MP R++VSWN M+ GY+ ++ AR
Sbjct: 219 MPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARE 278
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMG 365
FD M ++VVSW +++ Y + Y + L LF M + +PNE +++SVL+ACAN+
Sbjct: 279 LFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLT 338
Query: 366 VIDIGQWIHSYIQKCR--IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
++ G+W+H++I K + + + L +L+ MYAKCG D+A +F+++ KNV +WN++
Sbjct: 339 ALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNAL 398
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I M+G +++ F +M++ G PND TF+ VL+AC+H G+V EG F M
Sbjct: 399 ITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCG 458
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
++P+V+HYGCMVD+LGRAGL+ ++EEL+ +PM ++GALL AC H ++ + V
Sbjct: 459 VQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQ 518
Query: 544 Q--HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
H + L + G +VL+S+IYA+ GKW +V R++++ + K
Sbjct: 519 SEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D ++ + L + V+ N T + CA +
Sbjct: 279 LFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLT 338
Query: 172 SLREGKKVHARIVKCGFEL--DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+L EG+ VHA I K L + + +LI MY+ CG A K+F ++ WN++
Sbjct: 339 ALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNAL 398
Query: 230 IDGYVKNREVGFARELFD 247
I N G AR+ D
Sbjct: 399 ITRLAMN---GNARDSVD 413
>gi|357473845|ref|XP_003607207.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508262|gb|AES89404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 290/561 (51%), Gaps = 57/561 (10%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGL-SQDSFAASRVLKKLCTSLSSVSLSVLFFD--GI 116
+L KL S S +K+ I T+ SGL S + + ++S + F I
Sbjct: 12 LLNKLSSISELKQLQAIITK---SGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSI 68
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL--- 173
+ F+ NT++++F P AL Y +M+ V + YT + K C+ L
Sbjct: 69 LIHNPFISNTMIRAFSHSCFPLQAL-LIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQE 127
Query: 174 -------------REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
+G ++H R++K GF+ D V+NSL++ YS CG V
Sbjct: 128 SGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLV------------ 175
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
AR LFD + + + +WN MIS Y V D E+A+ L +LM
Sbjct: 176 -------------------SVARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELM 216
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P + VVSWN +I Y ++G+V +AR F M RN VSWN ++A V +DY L LF
Sbjct: 217 PCKTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFS 276
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M KP E +L+S+L ACA G ++IG I+ ++ C K + L +L+ MY KCG
Sbjct: 277 EMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCG 336
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR---GPTPNDATFIC 457
+ LA +F+ M K V WN+M++G +HG E+ ++F EME+ P+ TFI
Sbjct: 337 NLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIG 396
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
VL AC+H G+V + WYFD M + YKI P +HYGCMVDLL R GL+ ++ +++ P +
Sbjct: 397 VLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQ 456
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
LW LL AC T SN+EL +I + L +L+ G YVLLSNIYA G+WDEVE LR
Sbjct: 457 NSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLR 516
Query: 578 RIMKEKELEKAVGSSLVHPGE 598
M + + G S ++ E
Sbjct: 517 SEMDYLHVPRQAGYSQINMKE 537
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/608 (31%), Positives = 314/608 (51%), Gaps = 77/608 (12%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L+ +L ++ C + QIH Q+L++ + + +F S+++ L ++ + L F+
Sbjct: 32 LTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKII-----DLKDLAYASLVFNQ 86
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ +P+ + N +++ + Y K+ + ++ N++T+P L C +R L
Sbjct: 87 LTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVH 146
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK H + K G + D +V +SLI MY+ CGE
Sbjct: 147 GKIGHCLVFKAGLDGDEYVNHSLITMYARCGE---------------------------- 178
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF----------DLMPFRDV 285
+GFAR++FD M +RD+ +WNSMISGY +G + A GLF D M V
Sbjct: 179 ---MGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSV 235
Query: 286 VS------------W-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNV 316
+ W + +ID Y K G++ SAR FD M ++V
Sbjct: 236 LGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDV 295
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
V+WN ++ Y + E + LF+ M P+ +++ VL+AC+ +G +D+G+W+ ++
Sbjct: 296 VTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETH 355
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ ++ DV ++++L+ MYAKCG +D A VF++M KN VSWN+MI HGQ ++A
Sbjct: 356 ASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEA 415
Query: 437 LEMFMEMEKRGPT--PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
L +F M K T PND TFI VLSAC HAG+V EG F+ M + + PKVEHY CM
Sbjct: 416 LSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCM 475
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VDL RAGL+ ++ +L+ K+P + + G+LL AC N+++G+ V Q +E+E +
Sbjct: 476 VDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNS 535
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
G YV+ S IYA+ +WD+ +R +M++ + K G S + G E + +
Sbjct: 536 GNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSM 595
Query: 615 IVYSMLGE 622
+Y +L E
Sbjct: 596 NIYQLLNE 603
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 299/554 (53%), Gaps = 48/554 (8%)
Query: 87 QDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYE 146
+++F+ + VL L T + + F + EPD N ++ F + AL F+ +
Sbjct: 83 RNTFSYNAVLSVL-TKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
FV N Y+F CAG+ L G ++HA I K + LD+++ ++L+ MYS CG
Sbjct: 142 MHSEDFV-LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCG 200
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-------------- 252
V A++ F+ V ++V+WNS+I Y +N G A E+F M +
Sbjct: 201 VVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVS 260
Query: 253 --------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
D+ N+++ Y + A +FD MP R+VV
Sbjct: 261 ACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVV 320
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
S M+ GYA+ +V +AR F M +NVVSWN L+A Y + + E +RLF + R
Sbjct: 321 SETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI------KPDVLLSTSLLTMYAKCG 400
P + ++L ACAN+ + +G+ H+ I K + D+ + SL+ MY KCG
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCG 440
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+++ VF+ M E++VVSWN+MI+GY +G G ALE+F +M G P+ T I VLS
Sbjct: 441 MVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLS 500
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+HAG+V EG YF M+ + P +H+ CMVDLLGRAG + ++ +L+ +PM+
Sbjct: 501 ACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDN 560
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+WG+LL+AC H N ELGK VA+ LME++P + GPYVLLSN+YA G+W +V +R+ M
Sbjct: 561 VVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQM 620
Query: 581 KEKELEKAVGSSLV 594
+++ + K G S +
Sbjct: 621 RQRGVIKQPGCSWI 634
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 197/413 (47%), Gaps = 82/413 (19%)
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
+ +K++ + + F L C +S + +++HARI+K F ++F++N L+ Y
Sbjct: 6 FVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYG 65
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISG 263
CG DARKVF+ P + ++N+++ K ++ A +F MPE D +WN+M+SG
Sbjct: 66 KCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSG 125
Query: 264 -------------YVDV-------------GDMEAANGLFDL-------------MPFRD 284
+VD+ + A GL DL D
Sbjct: 126 FAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLD 185
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V + ++D Y+K G V A+ FD M +RN+VSWN L+ Y + + L +F M+
Sbjct: 186 VYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMD 245
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHS-YIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+P+E +L SV++ACA+ I G IH+ +++ + + D++L +L+ MYAKC ++
Sbjct: 246 NGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVN 305
Query: 404 LARNVFD-------------------------------NMTEKNVVSWNSMIMGYGMHGQ 432
AR VFD NM EKNVVSWN++I GY +G+
Sbjct: 306 EARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGE 365
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSAC-----------THAGMVLEGWWY 474
E+A+ +F+ +++ P TF +L+AC H ++ G+W+
Sbjct: 366 NEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWF 418
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+IF N ++ Y G E A +FD MP R+ S+N ++ K G + A N F M
Sbjct: 53 EIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMP 112
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
+ SWN +++ + + + E LR F M D NE S S L+ACA + +++G
Sbjct: 113 EPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQ 172
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IH+ I K R DV + ++L+ MY+KCGV+ A+ FD M +N+VSWNS+I Y +G
Sbjct: 173 IHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGP 232
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
KALE+F+ M G P++ T V+SAC + EG + + K +
Sbjct: 233 AGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGN 292
Query: 493 CMVDLLGRAGLMRDSEELVSKLPM 516
+VD+ + + ++ + ++P+
Sbjct: 293 ALVDMYAKCRRVNEARLVFDRMPL 316
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/550 (35%), Positives = 309/550 (56%), Gaps = 18/550 (3%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDA 121
Q LE C ++ I T L S ++ +++L+ + S + + +L FD I P+
Sbjct: 19 QTLEQCKQIQSI--IVTSGLYSTQDNNTLFLTKLLQCVPFSQNQNTCLLLLFDTINTPNT 76
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK-KVH 180
+ N ++ + + P +L Y K+ K V+ + +TFPLL K + +S+ + ++
Sbjct: 77 RLLNKMIAA---CSHPHISL-LCYAKLRQKGVQPDKHTFPLLLKTFS--KSIAQNPFMIY 130
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A+I K GF+LDLF+ N+LI ++ G V AR+VF++ P D V W ++I+GYVKN G
Sbjct: 131 AQIFKLGFDLDLFIGNALIPAFANSGFVESARQVFDESPFQDTVAWTALINGYVKNDCPG 190
Query: 241 FARELFDFMPERD----IFTWNSMISGYVDVGDMEAANGL--FDLMPFR---DVVSWNCM 291
A + F M RD T S++ VGD + + F + R D ++ +
Sbjct: 191 EALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYVEAGRVQLDGYVFSAL 250
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+D Y K G+ A F+ + R+VV W +L+A YV+ + + LR F M+ + PN+
Sbjct: 251 MDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDALRAFWDMLSDNVAPND 310
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+L SVL+ACA MG +D G+ +H YI+ +I +V L T+L+ MYAKCG +D A VF+N
Sbjct: 311 FTLSSVLSACAQMGALDQGRLVHQYIECNKINMNVTLGTALVDMYAKCGSIDEALRVFEN 370
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M KNV +W +I G +HG AL +F M K G PN+ TF+ VL+AC+H G V EG
Sbjct: 371 MPVKNVYTWTVIINGLAVHGDALGALNIFCCMLKSGIQPNEVTFVGVLAACSHGGFVEEG 430
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F+LM+ Y ++P+++HYGCMVD+LGRAG + D+++++ +PM+ P + GAL AC
Sbjct: 431 KRLFELMKHAYHLKPEMDHYGCMVDMLGRAGYLEDAKQIIDNMPMKPSPGVLGALFGACL 490
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H E+G+ + L+ +P G Y LL+N+Y W+ +R++MK + KA G
Sbjct: 491 VHKAFEMGEHIGNLLVNQQPNHSGSYALLANLYKMCQNWEAAAQVRKLMKGLRVVKAPGY 550
Query: 592 SLVHPGEFAS 601
S + F S
Sbjct: 551 SRIEVDGFNS 560
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 273/451 (60%), Gaps = 12/451 (2%)
Query: 190 LDLFVR---------NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
LDLF R N++I CG + DA+++F+ D+V+W +M+ G KN V
Sbjct: 115 LDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVE 174
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
AR LFD MP R++ +WN+MI+GY ++ A LF MP RD+ SWN MI G+ + G
Sbjct: 175 DARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGE 234
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLT 359
+ A F M +NV++W ++ YV+ E LR+F +M+ + KPN + ++VL
Sbjct: 235 LNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLG 294
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNV 417
AC+++ + GQ IH I K + + ++L+ MY+KCG + AR +FD+ ++++++
Sbjct: 295 ACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDL 354
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
+SWN MI Y HG G++A+ +F EM++ G ND TF+ +L+AC+H G+V EG+ YFD
Sbjct: 355 ISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDE 414
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ + I+ + +HY C+VDL GRAG ++++ ++ L E +WGALL+ C+ H N++
Sbjct: 415 ILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNAD 474
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+GK+VA+ ++++EP++ G Y LLSN+YAS GKW E N+R MK+ L+K G S + G
Sbjct: 475 IGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVG 534
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+V + P + + +L ++ +MK
Sbjct: 535 NTVQVFVVGDKPHSQYEPLGHLLHDLHTKMK 565
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 164/338 (48%), Gaps = 79/338 (23%)
Query: 171 RSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD----LVT 225
R REG+ +AR V E D+ + ++I Y CG + +ARK+F+ WD +VT
Sbjct: 10 RLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDR---WDAKKNVVT 66
Query: 226 WNSMIDGYVKNREV-----------------------GFAR--------ELFDFMPERDI 254
W +M++GY+K +V G+AR +LF MPER++
Sbjct: 67 WTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNV 126
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+WN++I+ V G +E A LFD M RDVVSW M+ G AK G V AR FD+M +R
Sbjct: 127 VSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVR 186
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
NVVSWN ++ Y + + E L+LF RM P D+ W
Sbjct: 187 NVVSWNAMITGYAQNRRLDEALQLFQRM------PER----------------DMPSW-- 222
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
+++T + + G ++ A +F M EKNV++W +M+ GY HG E
Sbjct: 223 ---------------NTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSE 267
Query: 435 KALEMFMEMEKRGP-TPNDATFICVLSACTHAGMVLEG 471
+AL +F++M PN TF+ VL AC+ + EG
Sbjct: 268 EALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEG 305
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 154/379 (40%), Gaps = 72/379 (18%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F +QE + +M ++ AL + + + ++ N TF + C+ +
Sbjct: 241 LFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLA 300
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV--WDLVTWNSM 229
L EG+++H I K F+ V ++LI+MYS CGE+ ARK+F+DG + DL++WN M
Sbjct: 301 GLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGM 360
Query: 230 IDGYVKNREVGFARE---LFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFD-LMP 281
I Y + G+ +E LF+ M E + T+ +++ G +E FD ++
Sbjct: 361 IAAYAHH---GYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILK 417
Query: 282 FRDVV----SWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLALYVRCKDYCECL 336
R + + C++D + G + A N + + + W LLA
Sbjct: 418 NRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLA------------ 465
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT-M 395
C G DIG+ + I K I+P + SLL+ M
Sbjct: 466 -----------------------GCNVHGNADIGKLVAEKILK--IEPQNAGTYSLLSNM 500
Query: 396 YAKCGVMDLARNVFDNMTEKNV-----VSW-------NSMIMGYGMHGQ----GEKALEM 439
YA G A NV M + + SW ++G H Q G ++
Sbjct: 501 YASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLLHDL 560
Query: 440 FMEMEKRGPTPNDATFICV 458
+M+K G P+D + V
Sbjct: 561 HTKMKKAGDMPDDDLLVSV 579
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 254/419 (60%), Gaps = 1/419 (0%)
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
++I+ Y G++ +AR++ P ++ +MI GYV+N+ + AR++F+ + RD+
Sbjct: 300 TVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVC 359
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WN+MI+GY G M+ A LF M +D+VSWN M+ YA++G + +A F+ M +N+
Sbjct: 360 WNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNI 419
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSWN L++ + Y + L+ F M KP++++ L++CA++ + +G+ +H
Sbjct: 420 VSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQL 479
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ K D+ +S +L+TMYAKCG + A +F ++ +VVSWNS+I Y ++G G +A
Sbjct: 480 VMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREA 539
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L++F +ME G P++ TF+ +LSAC+H G++ +G F M + Y IEP EHY CMVD
Sbjct: 540 LKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVD 599
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGRAG + ++ +LV + + A +WGALL AC H N EL K A+ L+E EP
Sbjct: 600 LLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSN 659
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
YVLLSN+ A G+WDEV +RR+MKEK EK G S + + E+ P H + +
Sbjct: 660 YVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSED-PAHPRAV 717
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 199/419 (47%), Gaps = 69/419 (16%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ Y+ + +AR++F+ P DLV+WNSM+ GY +N E+ + F+ M ERD+
Sbjct: 144 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 203
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN M+ G+V+VGD+ ++ F+ +P + VSW M+ G+A+ G + AR FD+M +RN
Sbjct: 204 SWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRN 263
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW--- 372
VV+WN ++A YV+ E + LF M + N S +V+ MG +D +
Sbjct: 264 VVAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSISWTTVINGYVRMGKLDEARQLLN 319
Query: 373 -------------IHSYIQKCR-------------------------------------- 381
I Y+Q R
Sbjct: 320 QMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHL 379
Query: 382 ----IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+K D++ +++ YA+ G MD A +F+ M EKN+VSWNS+I G +G AL
Sbjct: 380 FKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDAL 439
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL-MQRIYKIEPKVEHYGCMVD 496
+ FM M G P+ +TF C LS+C H + G L M+ Y + V + ++
Sbjct: 440 KSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN--ALIT 497
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS-ELGKIVAQHLMELEPRDP 554
+ + G + S EL+ K W +L++A + + N E K+ H ME+E P
Sbjct: 498 MYAKCGSI-SSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLF--HKMEVEGVAP 553
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 196/424 (46%), Gaps = 49/424 (11%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+F N I G++ +A KVF+ + VT NSMI + KN + AR+LFD MP+
Sbjct: 15 VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R+I +WNSMI+ Y+ +E A LFD MP RD+ SW MI Y + G + ARN F+ +
Sbjct: 75 RNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL 134
Query: 312 CMR-NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+ N V N ++A Y + + + E RLFD M D S S+LT G + +G
Sbjct: 135 PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDL----VSWNSMLTGYTRNGEMRLG 190
Query: 371 -QWIHSYIQKCRI--------------------------KPDVLLSTSLLTMYAKCGVMD 403
Q+ ++ + P+ + ++L +A+ G +
Sbjct: 191 LQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIA 250
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR +FD M +NVV+WN+MI Y + ++A+ +FMEM P N ++ V++
Sbjct: 251 EARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSISWTTVINGYV 306
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
G + E + M Y+ V M+ + M D+ ++ +++ + W
Sbjct: 307 RMGKLDEARQLLNQMP--YR---NVAAQTAMISGYVQNKRMDDARQIFNQISIR-DVVCW 360
Query: 524 GALLSACSTHSNSELGKI-VAQHLM-ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+++ S+ G++ A HL ++ +D + + YA G+ D + MK
Sbjct: 361 NTMIAGY-----SQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK 415
Query: 582 EKEL 585
EK +
Sbjct: 416 EKNI 419
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF CA + +L+ GK++H ++K G+ DLFV N+LI MY+ CG + A +F+D
Sbjct: 456 TFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDI 515
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAAN 274
+D+V+WNS+I Y N A +LF M D T+ ++S VG ++
Sbjct: 516 DHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGL 575
Query: 275 GLFDLM-------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
LF M P + + CM+D + G + A M + N W LL
Sbjct: 576 KLFKCMVQAYNIEPLAE--HYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLG 631
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 307/571 (53%), Gaps = 27/571 (4%)
Query: 42 KFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT 101
K +T+ PI L L L+ C + K QIHTQ + + + + S+ +
Sbjct: 10 KTINTNTNHSPIFLL----LSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSI----- 60
Query: 102 SLSSVSLSVLFFDGIQ-EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
SL + S L F I P+ + N ++++ + Y +M + N++TF
Sbjct: 61 SLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTF 120
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
P + CA + +R + H + K G + D NS++ MY CGE ARKVF++
Sbjct: 121 PFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITE 180
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMP--------ERDIFTWNSMISGYVDVGDMEA 272
DLV+WNS++ GY K +GFARE + E D + S++ ++GD+E
Sbjct: 181 KDLVSWNSLLSGYAK---LGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLEL 237
Query: 273 ANGLFDLMPFR--DVVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+ + R V S+ + +I Y+K G + S+R FD M R+ ++WN ++ Y +
Sbjct: 238 GRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQ 297
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
E + LF M PN+ +L +VL+ACA++G +D+G+ + Y ++ D+ +
Sbjct: 298 NGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFV 357
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+T+L+ MYAKCG ++ A+ VF++M KN SWN+MI HG+ ++AL +F M G
Sbjct: 358 ATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 449 T--PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
+ PND TF+ +LSAC HAG+V EG+ FD+M ++ + PK+EHY CMVDLL RAG + +
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ +++ K+P + GAL SAC N ++G+ V Q L+EL+P + G Y++ S IY +
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
WD+ +R +M+E + K G S + G
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCSWIEVG 568
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/460 (37%), Positives = 270/460 (58%), Gaps = 30/460 (6%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
++CA ++S+++G+++H+ I E+D + + L+ MY CG++ + R++F+ +
Sbjct: 109 QLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVF 168
Query: 225 TWNSMIDGYVK-------------NREVGF-----ARELFDFMPERDIFTWNSMISGYVD 266
WN +++GY K RE+G AR+LFD + +RD+ +WNSMISGYV
Sbjct: 169 LWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVS 228
Query: 267 VGDMEAANGLFDLMPFRDVVS------------WNCMIDGYAKIGNVTSARNCFDRMCMR 314
G E LF+ M + + NC++D Y+K GN+ SA F+ M R
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGER 288
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+VVSW ++A Y R +RLF M + D PN ++ +L ACA++ ++ GQ IH
Sbjct: 289 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIH 348
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
+I + D ++ +L+ MY KCG + LAR +FD + EK++VSW MI GYGMHG G
Sbjct: 349 GHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 408
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+A+ F EM G P++ +FI +L AC+H+G++ EGW +F++M+ IEPK EHY C+
Sbjct: 409 EAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACI 468
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VDLL RAG + + + + +P+E +WGALL C + + +L + VA+H+ ELEP +
Sbjct: 469 VDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENT 528
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G YVLL+NIYA KW+EV+ LR + + L K G S +
Sbjct: 529 GYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWI 568
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N T + CA + +L G+++H I++ GF LD V N+L+ MY CG + AR +F
Sbjct: 324 NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLF 383
Query: 216 EDGPVWDLVTWNSMIDGY----VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
+ P DLV+W MI GY + + E+ + E D ++ S++ G ++
Sbjct: 384 DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLD 443
Query: 272 AANGLFDLMPFRDVVS-----WNCMIDGYAKIGNVTSA 304
G F++M + + C++D A+ GN++ A
Sbjct: 444 EGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKA 481
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 111/280 (39%), Gaps = 69/280 (24%)
Query: 332 YCEC--LRLFDRMIRGDAKPNEA--SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+CE LR +I KP+ + SVL CA++ I G+ IHS IQ ++ D +
Sbjct: 78 FCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV 137
Query: 388 LSTSLLTMYAKCGVM--------------------------------------------- 402
L + L+ MY CG +
Sbjct: 138 LGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELG 197
Query: 403 ----DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI-- 456
+ AR +FD + +++V+SWNSMI GY +G EK L++F +M G + AT +
Sbjct: 198 IRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257
Query: 457 ------CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
C+L + +G + F+ M E V + M+ R GL S L
Sbjct: 258 ELTLNNCLLDMYSKSGNLNSAIQVFETMG-----ERSVVSWTSMIAGYAREGLSDMSVRL 312
Query: 511 VSKLPME---AGPALWGALLSACSTHSNSELGKIVAQHLM 547
++ E +L AC++ + E G+ + H++
Sbjct: 313 FHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHIL 352
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 258/482 (53%), Gaps = 40/482 (8%)
Query: 155 HNHYTFPLLGKVCAGIRSLREG--KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
H+ P+L K A G K +HA +K F DL V +++ MY CG + DAR
Sbjct: 52 HHQPLLPILLKAAATASPAEPGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADAR 111
Query: 213 KVFEDGP-------------------------------VWDLVTWNSMIDGYVKNREVGF 241
+ F++ P W VTW ++I G+ K ++
Sbjct: 112 RAFDEMPDRNVISYNALLAGYAAAGDMDGALALFGGMRSWTYVTWATLIRGFAKKGDMAE 171
Query: 242 ARELFDFMPE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR F+ P R + TW ++ GYV GDMEAA +FD MP R+ W+ M+ GY K G
Sbjct: 172 ARRWFETTPPGMRTVVTWTVLVHGYVSAGDMEAAREVFDRMPARNAFVWSSMVTGYFKAG 231
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
N A+ F R+ RN+V+WN L+A Y + + L FD M++ KP+E ++ S+L+
Sbjct: 232 NAEEAQAVFHRIPTRNLVNWNALIAGYAQIGCSEKALEAFDSMLQERVKPDEFTMASLLS 291
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G ++ G+ +H +I + I+ + + L+ MYAKCG + AR +FD M KN
Sbjct: 292 ACAQLGSLEQGKKVHDFINREHIRKNHFVLNGLIDMYAKCGDLVYARYIFDGMRWKNTEC 351
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI HG+ ++AL +F +ME G TPN T + VL ACTH G V EG F+ +
Sbjct: 352 WNTMISALASHGRSDEALHLFFQMEHSGQTPNTITVLAVLGACTHGGFVDEGLRIFNKLD 411
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y +E VEHYGC+VDLLGRAG ++++ E+V +P E +WG+LL AC H ++E+
Sbjct: 412 -AYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVKNMPEEPNEVIWGSLLGACRVHGDAEMS 470
Query: 540 KIVAQHLMELE----PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
++V + L + Y++LSNI A+ +W++ E +RR M +EK S +
Sbjct: 471 RLVTDEIHRLHSVHASSNDAEYIMLSNIMAASKRWEQAEQIRRKMARHGVEKTPACSSLE 530
Query: 596 PG 597
G
Sbjct: 531 LG 532
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ M+ + V+ + +T L CA + SL +GKKVH I + + FV N LI MY+
Sbjct: 271 FDSMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHDFINREHIRKNHFVLNGLIDMYAK 330
Query: 205 CGEVLDARKVFEDGPVW-DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMI-- 261
CG+++ AR +F DG W + WN+MI + A LF F E T N++
Sbjct: 331 CGDLVYARYIF-DGMRWKNTECWNTMISALASHGRSDEALHLF-FQMEHSGQTPNTITVL 388
Query: 262 --------SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
G+VD G + N L V + C++D + G + A M
Sbjct: 389 AVLGACTHGGFVDEG-LRIFNKLDAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVKNMPE 447
Query: 314 R-NVVSWNILLA 324
N V W LL
Sbjct: 448 EPNEVIWGSLLG 459
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 299/541 (55%), Gaps = 24/541 (4%)
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+L+ LF + + D F N+++ D AL + M + +FP K
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEAL-LAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + + GK+ H + G++ D+FV ++LI MYS CG++ DARKVF++ P ++V+W
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 227 NSMIDGYVKNREVGFARELF-----DFMPERDIFTWNSMISGYVDV----------GDME 271
SMI GY N A LF D + D +SM G V V G E
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM--GLVSVISACSRVPAKGLTE 203
Query: 272 AANGLFDLMPF-RDVVSWNCMIDGYAK--IGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+ + F R V N ++D YAK G V AR FD++ ++ VS+N ++++Y +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 329 CKDYCECLRLFDRMIRGDAKP-NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
E +F R+++ N +L +VL A ++ G + IG+ IH + + ++ DV+
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+ TS++ MY KCG ++ AR FD M KNV SW +MI GYGMHG KALE+F M G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN TF+ VL+AC+HAG+ +EGW +F+ M+ + +EP +EHYGCMVDLLGRAG ++ +
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+L+ ++ M+ +W +LL+AC H N EL +I L EL+ + G Y+LLS+IYA
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADA 503
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQ 626
G+W +VE +R IMK + L K G SL+ GE I + P R+ I Y L E+ +
Sbjct: 504 GRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKI-YEFLAELNRK 562
Query: 627 M 627
+
Sbjct: 563 L 563
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V+++ FD I + D N+IM + A + + K V N T +
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
+ +LR GK +H ++++ G E D+ V S+I MY CG V ARK F+ ++ +
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGD-------MEAAN 274
W +MI GY + A ELF M + + T+ S+++ G A
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
G F + P + + CM+D + G + A + RM M+ + + W+ LLA
Sbjct: 416 GRFGVEP--GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/580 (32%), Positives = 309/580 (53%), Gaps = 69/580 (11%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
I L+SC + + +IH Q++VSG SQ ++ + +L L S S+ + F+ I P
Sbjct: 30 IFSVLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLS-LYISFGSLGSAQKVFEDITAP 88
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N I+K ++ + ++M VE N +T+ L C R REG+++
Sbjct: 89 STTVWNQIIKGHTRSKTSKKSIELF-KRMTLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H R++ G+ +L+VR +LI++Y+ G DG +DL
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYANGG----------DGGDFDLKR-------------- 183
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR LFD MP+ ++ WNS+++GYV GD + A +FD MP R+V +W M+ G+A+ G
Sbjct: 184 --ARYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNG 241
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+CK L LFD+M R + ++ +L++ L+
Sbjct: 242 ----------------------------QCK---LALSLFDQMRRAGVELDQVALVAALS 270
Query: 360 ACANMGVIDIGQWIHSYIQKC----RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
ACA +G + +G+WIH Y+++ + V L+ +L+ MYA CGVMDLA VF+ + ++
Sbjct: 271 ACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQR 330
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT---PNDATFICVLSACTHAGMVLEGW 472
N VSW+S+I G+ G G +A+ +F M G P++ TFI L+AC+HAG++ +G
Sbjct: 331 NTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGI 390
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M + + + P++EHYGCMVDLL RAGL+ ++ L+ +PM+ A+WGALLS C
Sbjct: 391 RLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRL 450
Query: 533 HSNSELGKIVAQHL-MELEPRD--PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
H N E+ VA+HL E+ P + G ++LL+N+YA++G+W + +RR M + ++K
Sbjct: 451 HKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPS 510
Query: 590 GSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
G S + +V ++Y MLG I Q +M
Sbjct: 511 GRSWIEINGVLCSFMVGEETHKDVNLIYEMLGNITRQTQM 550
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/481 (36%), Positives = 282/481 (58%), Gaps = 26/481 (5%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I + + N +++S++ N + ++ M ++ +HYT+P + K +G
Sbjct: 1082 IFDEIPKKNVVFFNVMIRSYVN-NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSE 1140
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L G ++HA +V+ G +L++FV N LI MY CG +++A +V ++ P D+V+WNS++
Sbjct: 1141 DLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVA 1200
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
G +N + A E+ M ++ D G M + L+P V+ C+
Sbjct: 1201 GCARNGQFDDALEVCKEM---------ELLGLKPDAGTMAS------LLP---AVTNTCL 1242
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
NV+ + F ++ +++VSWN+++A+Y+ E + +F +M P+
Sbjct: 1243 -------DNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDA 1295
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
S+ SVL AC ++ + +G+ IH Y+ + R++P++LL +L+ MYAKCG ++ AR VFD
Sbjct: 1296 ISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQ 1355
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M ++VVSW SMI YGM+G+G A+ +F M+ G P+ F+ VLSAC+HAG++ EG
Sbjct: 1356 MKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEG 1415
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+YF LM KI P++EH+ CMVDLLGRAG + ++ + ++PME +WGALLSAC
Sbjct: 1416 RYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACR 1475
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
+SN +G + A L +L P G YVLLSNIYA G+W++V +R IMK K ++K G
Sbjct: 1476 VYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGV 1535
Query: 592 S 592
S
Sbjct: 1536 S 1536
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%)
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
++ YA G S R+ FD + +NVV +N+++ YV Y + L +F M P+
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ VL A + + +G IH+ + + + +V + L++MY KCG + A V D
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
M ++VVSWNS++ G +GQ + ALE+ EME G P+ T +L A T+
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT 1240
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/554 (35%), Positives = 297/554 (53%), Gaps = 53/554 (9%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQE 118
++ KL S +KE Q ++ +G ++++ S L S+ + F
Sbjct: 2 MIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETSM 61
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL----- 173
D+F+CNT+++++ P AL Y +M V+ +H+T+ + + CA R++
Sbjct: 62 DDSFICNTMIRAYSNTVFPLKAL-LIYNRMQRMDVDSDHFTYNFVLRACA--RAIKCTEM 118
Query: 174 -----------REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
R+G ++HARI+K GF+ D V+NSL+ +YS G V
Sbjct: 119 DDQCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLV-------------- 164
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
GFAR +F+ M + +WN M+S Y V D ++A+ L + MP
Sbjct: 165 -----------------GFARLIFNEMTVKTAVSWNIMMSAYNRVHDYKSADVLLESMPQ 207
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+ VSWN ++ Y ++ N+ +AR F+ M R+VVSWN +++ YV KDY L LF M
Sbjct: 208 TNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVSWNSIISGYVNVKDYKGALDLFHSM 267
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ + + E + +S+L ACA +G ++IG+ IH +++ + + L +++ MYAKCG +
Sbjct: 268 KQWNIRATEVTFISILGACAELGALEIGKKIHDSLKEKHYRIEGYLGNAIVDMYAKCGEL 327
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF--MEMEKRGPTPNDATFICVLS 460
LA VF+ M K V WN+MIMG +HG E+ALEMF M+ E PN TFI +L
Sbjct: 328 GLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEDGDHKPNRITFIALLI 387
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H G++ EG +F LM YKI P ++HYGCM+DLL R G + ++ ++ P +
Sbjct: 388 ACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGCMIDLLSRWGFLEEAYVMIKTCPFSSCS 447
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
LW LL C H + ELG+ + L ELEP G YVLLSNIYA E +WD+VE LR+ M
Sbjct: 448 VLWRTLLGGCRLHRHVELGEESFRKLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEM 507
Query: 581 KEKELEKAVGSSLV 594
+ K GSS V
Sbjct: 508 INYGVCKKAGSSHV 521
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 307/571 (53%), Gaps = 27/571 (4%)
Query: 42 KFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT 101
K +T+ PI L L L+ C + K QIHTQ + + + + S+ +
Sbjct: 10 KTINTNTNHSPIFLL----LSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSI----- 60
Query: 102 SLSSVSLSVLFFDGIQ-EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
SL + S L F I P+ + N ++++ + Y +M + N++TF
Sbjct: 61 SLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTF 120
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
P + CA + +R + H + K G + D NS++ MY CGE ARKVF++
Sbjct: 121 PFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITE 180
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMP--------ERDIFTWNSMISGYVDVGDMEA 272
DLV+WNS++ GY K +GFARE + E D + S++ ++GD+E
Sbjct: 181 KDLVSWNSLLSGYAK---LGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLEL 237
Query: 273 ANGLFDLMPFR--DVVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+ + R V S+ + +I Y+K G + S+R FD M R+ ++WN ++ Y +
Sbjct: 238 GRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQ 297
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
E + LF M PN+ +L +VL+ACA++G +D+G+ + Y ++ D+ +
Sbjct: 298 NGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFV 357
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+T+L+ MYAKCG ++ A+ VF++M KN SWN+MI HG+ ++AL +F M G
Sbjct: 358 ATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 449 T--PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
+ PND TF+ +LSAC HAG+V EG+ FD+M ++ + PK+EHY CMVDLL RAG + +
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ +++ K+P + GAL SAC N ++G+ V Q L+EL+P + G Y++ S IY +
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
WD+ +R +M+E + K G S + G
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCSWIEVG 568
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/402 (40%), Positives = 248/402 (61%), Gaps = 3/402 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N + ++C V A KVF + ++V W SMI+GY+ N+++ AR FD PERDI
Sbjct: 30 NQMFLFGTLCSMV-SANKVFCEMVEKNVVIWTSMINGYLLNKDLVSARRYFDLSPERDIV 88
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
WN+M++GY+++G+M A LFD MP RDV+SWN +++GYA IG++ + FD M RN
Sbjct: 89 LWNTMVAGYIEMGNMMEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDEMLERN 148
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
V SWN L+ Y + E L F RM+ G PN+A+L VL+ACA +G D G+ +H
Sbjct: 149 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGAFDFGKRVH 208
Query: 375 SYIQKCRI-KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
Y + K DV + +L+ MY KCG +++A VF + ++++SWN+MI G HG G
Sbjct: 209 KYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 268
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
+AL++F EM+ G +P+ TF+ VL AC H G+V +G YF+ M + I P++EH GC
Sbjct: 269 TEALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITPQIEHCGC 328
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
+VDLL RAG + + E ++K+P++A +W LL A + + G++ + L++LEPR+
Sbjct: 329 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDTGELALKELIKLEPRN 388
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
P +V+LSNIY G++D+ L+ M++ +K G S +
Sbjct: 389 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGISWIE 430
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + F N ++K + L + + V N T L+ CA + +
Sbjct: 141 FDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGA 200
Query: 173 LREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
GK+VH G+ ++D+ V+N+LI MY CG + A +VF+ DL++WN+MI+
Sbjct: 201 FDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 260
Query: 232 GYVKNREVGFARELFDFMPE----RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD--- 284
G + A +LF M D T+ ++ +G +E F+ M F D
Sbjct: 261 GLAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM-FTDFSI 319
Query: 285 ---VVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ C++D ++ G +T A ++M ++ + V W LL
Sbjct: 320 TPQIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 363
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/379 (43%), Positives = 241/379 (63%), Gaps = 2/379 (0%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+F +++ Y +G + A FD M RDV +WN MI GYA+ G++ A F M
Sbjct: 116 DVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMP 175
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQ 371
RNV SW +++ Y + Y + L +F M + +PNE +L SVL ACAN+G +++G+
Sbjct: 176 ARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGE 235
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMH 430
I Y + ++ +S +LL MYA+CG +D A VF+ + +N+ SWNSMIMG +H
Sbjct: 236 RIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVH 295
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+ ++A+E+F +M + G P+D TF+ VL ACTH GMV+EG +F+ M+R + I PK+EH
Sbjct: 296 GRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEH 355
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCMVDLLGRAG +R++ +L+ ++PME +WG LL ACS H + EL + A L ELE
Sbjct: 356 YGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELE 415
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P +PG YV+LSNIYA+ G+WD V LR++MK ++ KA G S + G + IVE+
Sbjct: 416 PSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSH 475
Query: 611 HRKCIVYSMLGEIGAQMKM 629
R +Y++L E+ +MK+
Sbjct: 476 SRSDEIYALLDEVSMKMKL 494
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 186/404 (46%), Gaps = 56/404 (13%)
Query: 97 KKLCTSL---SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
K+L SL S+ + FD I +P F+ N +++++ + P Y +M +
Sbjct: 20 KQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSS-HGPHHQCFSLYTQMCLQGC 78
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
N ++F L CA + S ++G+ +H VK GF D+F +L+ MY+ G + ARK
Sbjct: 79 SPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARK 138
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA 273
F++ V D+ TWNSMI GY + ++ A ELF MP R++ +W +MISGY G A
Sbjct: 139 QFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKA 198
Query: 274 NGLFDLMP----------------------------------------FRDVVSWNCMID 293
+F +M F+++ N +++
Sbjct: 199 LSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLE 258
Query: 294 GYAKIGNVTSARNCFDRM-CMRNVVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKP 349
YA+ G + A F+ + RN+ SWN + LA++ RC E + LF +M+R A P
Sbjct: 259 MYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCD---EAIELFYKMLREGAAP 315
Query: 350 NEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
++ + + VL AC + G++ GQ + S + I P + ++ + + G + A ++
Sbjct: 316 DDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDL 375
Query: 409 FDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGP 448
M E + V W +++ HG EKA E+E P
Sbjct: 376 ILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNP 419
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 100/240 (41%), Gaps = 29/240 (12%)
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
IQ ++ + + L+ + + A +FD + + V +N +I Y HG +
Sbjct: 7 IQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQC 66
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC--- 493
++ +M +G +PN+ +F + SAC +G R+ +GC
Sbjct: 67 FSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQG--------RMLHTHFVKSGFGCDVF 118
Query: 494 ----MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
+VD+ + GL+ + + ++ + P W ++++ + + E A L L
Sbjct: 119 ALTALVDMYAKLGLLSLARKQFDEMTVRDVPT-WNSMIAGYARCGDLE----GALELFRL 173
Query: 550 EP-RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
P R+ + + + YA G++ + ++ +M+E+ + + P E S++ C
Sbjct: 174 MPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEE--------TEMRPNEVTLASVLPAC 225
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/409 (40%), Positives = 253/409 (61%), Gaps = 7/409 (1%)
Query: 201 MYSVCGEVL--DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWN 258
MYS+ G V DA KVF + ++ W +++ +V ++ AR LFD P+ D+ WN
Sbjct: 1 MYSLRGGVFVADAYKVFAEMRDKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWN 60
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
++SGY+++GDM AA LFD MP DV+SWN ++ GYA G V F+ M RNV S
Sbjct: 61 VIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYS 120
Query: 319 WNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN L+ YVR + E L F RM + G PN+ ++++VL+AC+ +G ++IG+W+H Y
Sbjct: 121 WNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGKWVHVYA 180
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K ++ + +L+ MYAKCGV++ A +VFD + K++++WN++I MH AL
Sbjct: 181 DSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADAL 240
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
+F M++ G P+ TF+ +LSACTH G+V G+ +F M Y I P++EHYGCMVDL
Sbjct: 241 SLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHYGCMVDL 300
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAGL+ + ++V K+PME +W ALL AC + N E+ ++ Q L+ELEP +PG +
Sbjct: 301 LGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXYKNVEMAELALQRLIELEPNNPGNF 360
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
V+LSNIY G+ +V L+ M++ K G S++ ++S+VE
Sbjct: 361 VMLSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIG----CNDSVVE 405
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 146/313 (46%), Gaps = 47/313 (15%)
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
R+ + D+ + N ++ Y G+++ AR++F+ P D+++WN+++ GY N EV
Sbjct: 46 RLFDLAPQCDVVLWNVIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVEL 105
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV--------------- 286
++F+ MP R++++WN +I GYV G + A F M VV
Sbjct: 106 FVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACS 165
Query: 287 --------SW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
W N +ID YAK G + A + FD + ++++++WN
Sbjct: 166 RLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNT 225
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH--SYIQK 379
++ + L LF+ M R +P+ + + +L+AC +MG++ G ++H S +
Sbjct: 226 IINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNG-FLHFQSMVDD 284
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMG---YGMHGQGEK 435
I P + ++ + + G+++ A ++ M E +VV W +++ Y E
Sbjct: 285 YLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXYKNVEMAEL 344
Query: 436 ALEMFMEMEKRGP 448
AL+ +E+E P
Sbjct: 345 ALQRLIELEPNNP 357
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLL 163
V L V F+ + + + N ++ ++ AL + ++ V N YT +
Sbjct: 101 GEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAV 160
Query: 164 GKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
C+ + L GK VH G++ +LFV N+LI MY+ CG + A VF+ V D+
Sbjct: 161 LSACSRLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDI 220
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMP---ER-DIFTWNSMIS-----GYVDVGDMEAAN 274
+TWN++I+ + A LF+ M ER D T+ ++S G V G + +
Sbjct: 221 ITWNTIINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQS 280
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLALYVRCKDY 332
+ D + + + CM+D + G + A + +M M +VV W LL C+ Y
Sbjct: 281 MVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLG---ACRXY 336
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 288/534 (53%), Gaps = 64/534 (11%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL L + T QIH L GL + S + +CTSL + + F+ P
Sbjct: 12 ILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVS-VCTSLHQIPYATTIFNHTHHP 70
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ + N+I+K+ + F+ M + +++TFP L K + +R G+ +
Sbjct: 71 NILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCL 130
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA + G F R+S PV E+
Sbjct: 131 HAHVTALG-----FYRHS---------------------PV-----------------EI 147
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
G ++ Y + G ME AN +FD M R+VV WN MI+G+ K+G
Sbjct: 148 G-------------------LLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMG 188
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
++ F RM R+VVSWN++++ + K E +F M+ +P++A+L++VL
Sbjct: 189 DLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLP 248
Query: 360 ACANMGVIDIGQWIHSYIQ-KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
CA +G +D G+WIHSY K ++ + + SL+ Y KCG ++ A VF+ MT+KNVV
Sbjct: 249 VCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVV 308
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SWN+MI G G++G+GE +E+F +M ++G TP+D+TF+ VL+ C HAG V +G FD M
Sbjct: 309 SWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSM 368
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+K+ PK+EHYGC+VDLLGR G ++++ +L+ +P+ ALWGALLSAC TH + E+
Sbjct: 369 TVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREV 428
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+I A+ L+ LEP + G YVLLSN+YA E KW+EVE +R +M+ ++K G S
Sbjct: 429 AEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQS 482
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 261/408 (63%), Gaps = 10/408 (2%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPV--------WDLVTWNSMIDGYVKNREVGFARELFD 247
N+LI Y G +ARK+F+ P+ ++++WNSMI YV+ ++ ARELFD
Sbjct: 254 NTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFD 313
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
M ERD F+WN+MISGYV + DM+ A+ LF MP D +SWN MI G+++IG++ A +
Sbjct: 314 KMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDL 373
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F R+ +++VSWN +++ Y + +DY + +F +M KP+ +L S+L+ACA + +
Sbjct: 374 FKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDL 433
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMG 426
+G IH + K I D+ ++ SL+TMY++CG + AR VFD M +++V+SWN+MI G
Sbjct: 434 VLGTQIHQLVTKAFI-ADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGG 492
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
Y HG +AL++F M++ P+ TFI VL+AC HAG++ EG F+ M + I+P
Sbjct: 493 YAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKP 552
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+VEHY +VD++GR G + ++ L++ +P E A+WGALL AC H+N E+ + A+ L
Sbjct: 553 QVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEAL 612
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
M+L+P PYVLL N+YA G+WD+ +R +M++ ++K G S V
Sbjct: 613 MKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRV 660
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 191/394 (48%), Gaps = 26/394 (6%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+ + N I G + +AR++F+ W+ +TWN MI YVK RE+ AR+LF+ MP
Sbjct: 56 EFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMP 115
Query: 251 ERDIFTWNSMISGYVDVGD--MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
RDI +WN M+SGY+ G +E A +FD MP D VSWN M+ GYAK G + A F
Sbjct: 116 NRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELF 175
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA-CANMGVI 367
+ M RNVVSWN +++ Y+ + + F M + D+ ASL ++++ N ++
Sbjct: 176 NEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDS----ASLRALVSGLIQNDKLV 231
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM--------TEKNVVS 419
+ + + Y V +L+ Y + G+ AR +FD + + +NV+S
Sbjct: 232 EAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVIS 291
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WNSMIM Y G A E+F +M +R + ++ ++S + E F M
Sbjct: 292 WNSMIMCYVRAGDIVSARELFDKMVER----DTFSWNTMISGYVQILDMKEASNLFSRMP 347
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
EP + M+ G ++ + +L ++P E W +++S + + + G
Sbjct: 348 -----EPDTLSWNMMISGFSEIGSLKLAHDLFKRIP-EKSLVSWNSMISGYEKNEDYK-G 400
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+ M+LE + P + L S + A G D V
Sbjct: 401 AMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLV 434
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 45/323 (13%)
Query: 173 LREGKKVHAR-IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+R G V AR + E D F N++I Y ++ +A +F P D ++WN MI
Sbjct: 300 VRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMIS 359
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------PFRDV 285
G+ + + A +LF +PE+ + +WNSMISGY D + A +F M P R
Sbjct: 360 GFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHT 419
Query: 286 VSW--------------------------------NCMIDGYAKIGNVTSARNCFDRMCM 313
+S N ++ Y++ G + AR FD M +
Sbjct: 420 LSSILSACAGLVDLVLGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNL 479
Query: 314 -RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
R+V+SWN ++ Y E L+LFD M + + +P+ + +SVL ACA+ G+I+ G+
Sbjct: 480 QRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRR 539
Query: 373 -IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMH 430
+S + IKP V +L+ + + G ++ A ++ ++M E + W +++ +H
Sbjct: 540 EFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVH 599
Query: 431 GQGE---KALEMFMEMEKRGPTP 450
E A E M+++ P
Sbjct: 600 NNVEMARAAAEALMKLQPESSAP 622
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 261/408 (63%), Gaps = 10/408 (2%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPV--------WDLVTWNSMIDGYVKNREVGFARELFD 247
N+LI Y G +ARK+F+ P+ ++++WNSMI YV+ ++ ARELFD
Sbjct: 254 NTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFD 313
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
M ERD F+WN+MISGYV + DM+ A+ LF MP D +SWN MI G+++IG++ A +
Sbjct: 314 KMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDL 373
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F R+ +++VSWN +++ Y + +DY + +F +M KP+ +L S+L+ACA + +
Sbjct: 374 FKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDL 433
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMG 426
+G IH + K I D+ ++ SL+TMY++CG + AR VFD M +++V+SWN+MI G
Sbjct: 434 VLGTQIHQLVTKAFI-ADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGG 492
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
Y HG +AL++F M++ P+ TFI VL+AC HAG++ EG F+ M + I+P
Sbjct: 493 YAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKP 552
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+VEHY +VD++GR G + ++ L++ +P E A+WGALL AC H+N E+ + A+ L
Sbjct: 553 QVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEAL 612
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
M+L+P PYVLL N+YA G+WD+ +R +M++ ++K G S V
Sbjct: 613 MKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRV 660
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 191/394 (48%), Gaps = 26/394 (6%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+ + N I G + +AR++F+ W+ +TWN MI YVK RE+ AR+LF+ MP
Sbjct: 56 EFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMP 115
Query: 251 ERDIFTWNSMISGYVDVGD--MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
RDI +WN M+SGY+ G +E A +FD MP D VSWN M+ GYAK G + A F
Sbjct: 116 NRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELF 175
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA-CANMGVI 367
+ M RNVVSWN +++ Y+ + + F M + D+ ASL ++++ N ++
Sbjct: 176 NEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDS----ASLRALISGLIQNDKLV 231
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM--------TEKNVVS 419
+ + + Y V +L+ Y + G+ AR +FD + + +NV+S
Sbjct: 232 EAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVIS 291
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WNSMIM Y G A E+F +M +R + ++ ++S + E F M
Sbjct: 292 WNSMIMCYVRAGDIVSARELFDKMVER----DTFSWNTMISGYVQILDMKEASNLFSRMP 347
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
EP + M+ G ++ + +L ++P E W +++S + + + G
Sbjct: 348 -----EPDTLSWNMMISGFSEIGSLKLAHDLFKRIP-EKSLVSWNSMISGYEKNEDYK-G 400
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+ M+LE + P + L S + A G D V
Sbjct: 401 AMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLV 434
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 45/323 (13%)
Query: 173 LREGKKVHAR-IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+R G V AR + E D F N++I Y ++ +A +F P D ++WN MI
Sbjct: 300 VRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMIS 359
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------PFRDV 285
G+ + + A +LF +PE+ + +WNSMISGY D + A +F M P R
Sbjct: 360 GFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHT 419
Query: 286 VSW--------------------------------NCMIDGYAKIGNVTSARNCFDRMCM 313
+S N ++ Y++ G + AR FD M +
Sbjct: 420 LSSILSACAGLVDLVLGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNL 479
Query: 314 -RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
R+V+SWN ++ Y E L+LFD M + + +P+ + +SVL ACA+ G+I+ G+
Sbjct: 480 QRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRR 539
Query: 373 -IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMH 430
+S + IKP V +L+ + + G ++ A ++ ++M E + W +++ +H
Sbjct: 540 EFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVH 599
Query: 431 GQGE---KALEMFMEMEKRGPTP 450
E A E M+++ P
Sbjct: 600 NNVEMARAAAEALMKLQPESSAP 622
>gi|357477477|ref|XP_003609024.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510079|gb|AES91221.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 544
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/563 (35%), Positives = 289/563 (51%), Gaps = 59/563 (10%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGL-SQDSFAASRVLKKLCTSLSSVSLSVLFFD--GI 116
+L KL S S +K+ I T+ SGL S + + ++S + F I
Sbjct: 12 LLNKLSSMSELKQLQAIITK---SGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSI 68
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL--- 173
+ F+ NT++++F P AL Y +M+ V + YT + K C+ L
Sbjct: 69 LIHNPFISNTMIRAFSHSCFPLQAL-LIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQE 127
Query: 174 ---------------REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
+G ++H R++K GF+ D V+NSL++ YS CG V
Sbjct: 128 SGSCDDDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLV---------- 177
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
AR LFD + + + +WN MIS Y V D E A+ L +
Sbjct: 178 ---------------------SVARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLE 216
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
LMP + V+SWN +I Y ++G+V +AR F M RN VSWN ++A V +DY L L
Sbjct: 217 LMPCKTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALEL 276
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F M KP E +L+S+L ACA G ++IG I+ ++ C K + L +L+ MY K
Sbjct: 277 FSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCK 336
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR---GPTPNDATF 455
CG + LA +F+ M K V WN+M++G +HG E+ ++F EME+ P+ TF
Sbjct: 337 CGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTF 396
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
I VL AC+H G+V + WYFD M + YKI P +HYGCMVDLL R GL+ ++ +++ P
Sbjct: 397 IGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAP 456
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+ LW LL AC T SN+EL +I + L +L+ G YVLLSNIYA G+WDEVE
Sbjct: 457 FQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVER 516
Query: 576 LRRIMKEKELEKAVGSSLVHPGE 598
LR M + + G S ++ E
Sbjct: 517 LRSEMDYLHVPRQAGYSQINMKE 539
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 256/438 (58%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
DL N++I Y+ G++ AR++FE+ PV D+ TW +M+ YV++ + AR +FD MP
Sbjct: 218 DLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP 277
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
++ ++N MI+GY M+ LF+ MPF ++ SWN MI GY + G++ ARN FD
Sbjct: 278 QKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDM 337
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW ++A Y + Y E + + M R N ++ L+ACA++ +++G
Sbjct: 338 MPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELG 397
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H + + + L+ +L+ MY KCG +D A +VF + K++VSWN+M+ GY H
Sbjct: 398 KQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARH 457
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G G +AL +F M G P++ T + VLSAC+H G+ G YF M + Y I P +H
Sbjct: 458 GFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKH 517
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CM+DLLGRAG + +++ L+ +P E A WGALL A H N ELG+ A+ + ++E
Sbjct: 518 YACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKME 577
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P + G YVLLSN+YA+ G+W +V +R M++ ++K G S V V +C
Sbjct: 578 PHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFH 637
Query: 611 HRKCIVYSMLGEIGAQMK 628
K +Y+ L E+ +MK
Sbjct: 638 PEKGRIYAFLEELDLKMK 655
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
VKC + +RN + ++C VF+ P+ + V++N+MI GY++N + AR
Sbjct: 34 VKCTKAISTHMRNGHCDL-ALC--------VFDAMPLRNSVSYNAMISGYLRNAKFSLAR 84
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+LFD MP +D+F+WN M++GY + A LFD MP +DVVSWN M+ GY + G+V
Sbjct: 85 DLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDE 144
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR-----------MIRGDAKPNEA 352
AR+ FDRM +N +SWN LLA YVR E RLF+ ++ G K N
Sbjct: 145 ARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRN-- 202
Query: 353 SLMSVLTACANMGVIDIGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAK 398
L + V D+ W I Y Q + DV T+++ Y +
Sbjct: 203 MLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQ 262
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G++D AR VFD M +K +S+N MI GY + + + E+F EM P PN ++ +
Sbjct: 263 DGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEM----PFPNIGSWNIM 318
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
+S G + + FD+M + + + ++ + GL ++ ++ ++ +
Sbjct: 319 ISGYCQNGDLAQARNLFDMMPQRDSVS-----WAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Query: 519 ---GPALWGALLSACSTHSNSELGKIV 542
+ + LSAC+ + ELGK V
Sbjct: 374 ESLNRSTFCCALSACADIAALELGKQV 400
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 170/352 (48%), Gaps = 71/352 (20%)
Query: 179 VHARIVKCGFELDLF----VRNSLIHMYSVCGEVLDA-----RKVFEDGPVWDLVTWNSM 229
H R C L +F +RNS+ + + G + +A R +F+ P DL +WN M
Sbjct: 42 THMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLM 101
Query: 230 IDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW- 288
+ GY +NR + AR LFD MPE+D+ +WN+M+SGYV G ++ A +FD MP ++ +SW
Sbjct: 102 LTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWN 161
Query: 289 ------------------------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
NC++ GY K + AR FD++ +R+++S
Sbjct: 162 GLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLIS 221
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ------- 371
WN +++ Y + D + RLF+ D + +++ A G++D +
Sbjct: 222 WNTMISGYAQDGDLSQARRLFEESPVRDV----FTWTAMVYAYVQDGMLDEARRVFDEMP 277
Query: 372 ---------WIHSYIQKCRIK-----------PDVLLSTSLLTMYAKCGVMDLARNVFDN 411
I Y Q R+ P++ +++ Y + G + ARN+FD
Sbjct: 278 QKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDM 337
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
M +++ VSW ++I GY +G E+A+ M +EM++ G + N +TF C LSAC
Sbjct: 338 MPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACA 389
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 167/353 (47%), Gaps = 23/353 (6%)
Query: 230 IDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
I +++N A +FD MP R+ ++N+MISGY+ A LFD MP +D+ SWN
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M+ GYA+ + AR FD M ++VVSWN +L+ YVR E +FDRM
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM----PHK 155
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
N S +L A G ++ + + + + +++ L+ Y K ++ AR +F
Sbjct: 156 NSISWNGLLAAYVRSGRLEEARRLF----ESKSDWELISCNCLMGGYVKRNMLGDARQLF 211
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D + ++++SWN+MI GY G +A +F E P + T+ ++ A GM+
Sbjct: 212 DQIPVRDLISWNTMISGYAQDGDLSQARRLFEE----SPVRDVFTWTAMVYAYVQDGMLD 267
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
E FD M + ++ Y M+ + M EL ++P W ++S
Sbjct: 268 EARRVFDEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISG 321
Query: 530 CSTHSNSELGKIVAQHLMELEP-RDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
N +L + A++L ++ P RD + + YA G ++E N+ MK
Sbjct: 322 YC--QNGDLAQ--ARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMK 370
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
P + T ++ + + G DLA VFD M +N VS+N+MI GY + + A ++F +M
Sbjct: 31 PHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM 90
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
P + ++ +L+ + + FD M E V + M+ R+G
Sbjct: 91 ----PHKDLFSWNLMLTGYARNRRLRDARMLFDSMP-----EKDVVSWNAMLSGYVRSGH 141
Query: 504 MRDSEELVSKLPMEAGPALWGALLSA 529
+ ++ ++ ++P + + W LL+A
Sbjct: 142 VDEARDVFDRMPHKNSIS-WNGLLAA 166
>gi|242038381|ref|XP_002466585.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
gi|241920439|gb|EER93583.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
Length = 529
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 273/461 (59%), Gaps = 21/461 (4%)
Query: 137 PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRN 196
P ALS Y +++ H+ + LL A + S H+R+V L +R
Sbjct: 86 PHAALSHLYSRLLPP---HHDHARGLLDDAPAALHS-------HSRLVSSNSLLASLLR- 134
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
G++ AR +FE P D+V+WNSM+ G K + A ELFD MPE + +
Sbjct: 135 --------AGDITAARAMFEAMPERDVVSWNSMVAGLAKAGHLDEAIELFDQMPETNAAS 186
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WN+++SG++ G + A LF+ MP R+ VSW MI GYAK G+V +A N FDRM +++
Sbjct: 187 WNALVSGFMAQGHLAQAQELFERMPIRNNVSWITMISGYAKAGDVQAAANLFDRMDSKDL 246
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACANMGVIDIGQWIH 374
+WN +++ Y + E L +F+RM++ PNE + SV++AC+ +G + G W+
Sbjct: 247 YAWNAMISCYAQNGCAREALGIFNRMLKPHIWVAPNEKTFSSVISACSQLGDLRFGLWVE 306
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S++ + D L T+L+ +Y K G MD A ++F + ++VVS+++MI+G GMHG+
Sbjct: 307 SFMGYVGVHLDDHLRTALIDLYTKSGQMDRAFDLFRGLRSRDVVSYSAMIVGCGMHGKLN 366
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+A+ +F EM K PN TF+ +LSA +HAG++ E F M YKI P +EHY M
Sbjct: 367 EAISLFKEMSKARIDPNAVTFVGLLSAYSHAGLLEEARACFTSMSSKYKINPSMEHYTIM 426
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VD+LGR G + ++ +L+ ++P+ ++WGALL AC H+N ELG++ A ELEP++
Sbjct: 427 VDILGRCGKLEEAFQLIMQIPVCPHASVWGALLLACRLHNNIELGEVAASKCFELEPKES 486
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
G Y+LL NIYA KWD+V+ LR++M E+ L K GSS VH
Sbjct: 487 GYYILLGNIYAQAKKWDKVKGLRKMMAERGLSKTPGSSWVH 527
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 326/584 (55%), Gaps = 13/584 (2%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
D+ +LQ+ ++++ ++H +L SG+ + + + +L + S++ + FD
Sbjct: 48 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLS-MYAKCGSLTDARRVFD 106
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
I++ + ++++F+ N A Y E M + + TF L L+
Sbjct: 107 SIRDRNIVSWTAMIEAFVAGNKNLEAFKCY-ETMKLAGCKPDKVTFVSLLNAFTNPELLQ 165
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+KVH IV+ G EL+ V SL+ MY+ CG++ AR +F+ P ++VTW +I GY
Sbjct: 166 LGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYA 225
Query: 235 KNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP----FRDVV 286
+ +V A EL + M + ++ T+ S++ G +E + + R++
Sbjct: 226 QQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELW 285
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N +I Y K G + AR F + R+VV+W ++ Y + + E + LF RM +
Sbjct: 286 VVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG 345
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KP++ + SVLT+C++ + G+ IH + DV L ++L++MYAKCG MD A
Sbjct: 346 IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDAS 405
Query: 407 NVFDNMTEKNVVSWNSMIMGY-GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
VF+ M+E+NVV+W ++I G HG+ +ALE F +M+K+G P+ TF VLSACTH
Sbjct: 406 LVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V EG +F M Y I+P VEHY C VDLLGRAG + ++E ++ +P GP++WGA
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LLSAC HS+ E G+ A+++++L+P D G YV LS+IYA+ G++++ E +R++M+++++
Sbjct: 526 LLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585
Query: 586 EKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
K G S + G+ + + P + I Y LG++ Q+K
Sbjct: 586 VKEPGQSWIEVDGKVHVFHVEDKSHPESEQI-YVELGKLTEQIK 628
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
E L + + MI + +L CA + ++ G+ +H+ I K I+P+ L +LL
Sbjct: 30 EALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 89
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
+MYAKCG + AR VFD++ ++N+VSW +MI + + +A + + M+ G P+
Sbjct: 90 SMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKV 149
Query: 454 TFICVLSACTHAGMVLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF+ +L+A T+ ++ G + ++++ ++EP+V +V + + G + + +
Sbjct: 150 TFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDISKARVIFD 207
Query: 513 KLPMEAGPALWGALLSACSTHSNSELG 539
+LP E W L++ + ++
Sbjct: 208 RLP-EKNVVTWTLLIAGYAQQGQVDVA 233
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 199/624 (31%), Positives = 331/624 (53%), Gaps = 54/624 (8%)
Query: 52 PIVDLS--HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASR-VLKKLCTSLSSVSL 108
P V L+ H L LE CST F QI Q++ L +F SR +L T ++ +
Sbjct: 24 PTVSLALKHATLILLEKCSTRDHFKQILAQIMRINLIGQTFPMSRLILFSAITHPENLDM 83
Query: 109 SVLFF-DGIQEPDAFMCNTIMKSF-LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+VL F P+ ++ NT++ + L LN F +Y +++ + N TF L +
Sbjct: 84 AVLLFRHHTPHPNLYIYNTMISALSLSLNQSFA----FYNSLLSSCIYPNRSTFLFLLQA 139
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
+ L + ++H + G +++N+L+ +Y ++ A +VF+ D V++
Sbjct: 140 S---KFLSQVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSF 196
Query: 227 NSMIDGYVKN----REVGFARELFDFMPERDIFT----------------------W--- 257
N MI GY K + F E+ + D FT W
Sbjct: 197 NIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIER 256
Query: 258 ------------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
N+++ YV ++ A +F+++ +D +SWN MI GYAK+GN+ A
Sbjct: 257 RGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAH 316
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
N F+ M R++VSWN ++A Y + D RLF+ M+ + P+ +++++++A A +G
Sbjct: 317 NFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIG 376
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+WIH ++ + ++K D L ++ + MY KCG + A VF +TEK+V W +MI
Sbjct: 377 ALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVWTTMIT 436
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
G+ HG G KAL++F EM++ PN TF+ VL+AC+H+G V +G F+ M+ Y IE
Sbjct: 437 GFAFHGYGSKALQLFYEMQEY-VMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIE 495
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P VEHYGC+VDLLGR+G + ++++ +PM+ ++WGA+LSAC + N E+ +I +
Sbjct: 496 PGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKE 555
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
L++LEP G YVLLSNIYA+ G+W + +R IM+ + ++K G S V E +
Sbjct: 556 LLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVA 615
Query: 606 ENCPPHRKCIVYSMLGEIGAQMKM 629
+ R + S+L + ++MK+
Sbjct: 616 ADKRHPRWIEIQSILFCLKSEMKL 639
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/593 (31%), Positives = 303/593 (51%), Gaps = 54/593 (9%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
+++ ILQK ++ Q+H QL+V+G+ F SR+L+ C + V + F
Sbjct: 10 IEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQT-GCVEDARRMF 68
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
D + E + F IM+ + L D + +Y M+ + V +H+ FP + K C+ +++
Sbjct: 69 DKMSERNVFSWTAIMEMYCGLGDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNY 127
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
R GK V+ ++ GFE + V+ S++ M+ CG + AR+ FE+ D+ WN M+ GY
Sbjct: 128 RVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY 187
Query: 234 VKNREVGFARELFDFMP----------------------------------------ERD 253
E A +F M + D
Sbjct: 188 TSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD 247
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM--IDGYAKIGNVTSARNCFDRM 311
+ NS++ Y +E A F ++ D+VSWN M + G+ + G+ +A F RM
Sbjct: 248 LLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM 307
Query: 312 ----------CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
R+VV WN +++ + L L M + + N +++S L AC
Sbjct: 308 HIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 367
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+ + + G+ IH +I +C + + SL+ MY +CG + +R +FD M ++++VSWN
Sbjct: 368 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 427
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
MI YGMHG G A+ +F + G PN TF +LSAC+H+G++ EGW YF +M+
Sbjct: 428 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 487
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y ++P VE Y CMVDLL RAG ++ E + K+P E A+WG+LL AC H N +L +
Sbjct: 488 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 547
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A++L ELEP+ G YVL++NIY++ G+W++ +R +MKE+ + K G S +
Sbjct: 548 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 600
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 293/543 (53%), Gaps = 56/543 (10%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
++L++ +L LE C + Q+ L+ G +Q F A ++L+ +LS++S + F
Sbjct: 52 LNLNNSVLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIF 111
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
D ++ P+ ++ ++ ++ +D AL Y + + NH+ +P + K C +
Sbjct: 112 DHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGP 171
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
+ VH ++++ GFE V+ +L+ Y L W+
Sbjct: 172 GSARMVHCQVLRSGFEQYPVVQTALLDAY--------------------LRFWS------ 205
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
+V AR LFD M ER++ +W +MISGY +G + A LF+ MP RDV SWN +I
Sbjct: 206 ----DVESARLLFDEMTERNVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIA 261
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
GY + G A + F RM +W +G+ +PN+ +
Sbjct: 262 GYTQNGLFMEALSLFRRMIAVEAGAWG-----------------------QGN-RPNQVT 297
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+ L+AC + G++ +G+WIH Y+ + + D +S +L+ MY KCG + AR VFD
Sbjct: 298 AVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTL 357
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK--RGPTPNDATFICVLSACTHAGMVLEG 471
E+++ SWNSMI +HGQ + A+ +F EM G P++ TFI +L+ACTH G+V +G
Sbjct: 358 ERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKG 417
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
W YF+LM + Y IEP++EHYGC+VDLLGRAG ++ E+V + +E +WG+LL+ C
Sbjct: 418 WLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCK 477
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H +++L + + L++++P + G ++L+NIY GKWDEV +R+++KE+ K G
Sbjct: 478 IHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGC 537
Query: 592 SLV 594
S +
Sbjct: 538 SWI 540
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 319/582 (54%), Gaps = 28/582 (4%)
Query: 29 KTPPKL---WANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
K P L + N KP N R + D + +LQ+ C ++K+ QIH QLL + +
Sbjct: 5 KASPHLISRYLNLQKPHSKPNPN-RQALSDKFNSLLQQ---CLSIKQLKQIHAQLLTNSI 60
Query: 86 SQ-DSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF-LMLNDPFGALSF 143
+ +SF L K+ L + + +FF I +P + N +++ N AL F
Sbjct: 61 HKPNSF-----LYKIA-DLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEF 114
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y +M ++ N+ T+P L C+ + ++ G+ H +++ G + D V +SLI MY+
Sbjct: 115 Y-SRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYA 173
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG++ DARKVF++ DLV+WNSMI GY K R G A LF M E + S
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWN-----CMIDGYAKIGNVTSARNCFDRMCMR 314
++ ++GD++ + + + + ++ N +I Y K G++ SAR FD M +
Sbjct: 234 VLGACGELGDLKLGTWVEEFV-VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKK 292
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+ V+WN ++ Y + E ++LF M P++ +L+ +L+ACA++G +D+G+ +
Sbjct: 293 DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVE 352
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
Y + + DV + T+L+ MYAKCG +D A VF M +KN VSWN+MI HGQ +
Sbjct: 353 IYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQ 412
Query: 435 KALEMFMEMEKRGPT--PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
+AL +F M G T PND TF+ VLSAC HAG+V EG F +M + + PK+EHY
Sbjct: 413 EALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYS 472
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVDL RAG + ++ + V +P + + GALL AC N ++ + V + L+ELEP
Sbjct: 473 CMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPS 532
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ G YV+ S +YA+ +WD+ +R +MK+K + K G S +
Sbjct: 533 NSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWI 574
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 210/657 (31%), Positives = 320/657 (48%), Gaps = 83/657 (12%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P+ L S ++ H +L S ++ ++F + ++ L + + FDGI
Sbjct: 20 SSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTY-ARLGRLREARRVFDGI 78
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH----------- 155
+ F N ++ ++ L P A + + Y ++A H
Sbjct: 79 PLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRF 138
Query: 156 -----------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
N Y+F CA + LR G++VH + + D+ + +L+ MY+
Sbjct: 139 LAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAK 198
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPER------ 252
C +DAR+VF+ P ++V+WNS+I Y +N VG A LF F P+
Sbjct: 199 CERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSV 258
Query: 253 ----------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
D+ N+++ Y G A +FD MP R
Sbjct: 259 MSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRS 318
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
VVS ++ GYAK NV A+ F +M +NV++WN+L+A Y + + E +RLF ++ R
Sbjct: 319 VVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKR 378
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMYAK 398
P + +VL AC N+ V+ +GQ H ++ K + DV + SL+ MY K
Sbjct: 379 DSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 438
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G +D VF+ M ++ VSWN+MI+GY +G+ + AL +F M P+ T I V
Sbjct: 439 TGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGV 498
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
LSAC H+G+V EG +F M + I P +HY CMVDLLGRAG ++++EEL+ +P E
Sbjct: 499 LSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEP 558
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
LW +LL AC H N ELG+ A L EL+P + GPYVLLSN+YA GKW +V +RR
Sbjct: 559 DSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRR 618
Query: 579 IMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQMKMCRRDV 634
MK++ + K G S + G + + +N P R I +S L I QM+MCR +
Sbjct: 619 SMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEI-HSTLRII--QMEMCRTSI 672
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 297/548 (54%), Gaps = 51/548 (9%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV------LFFDG 115
+ L C T+ + Q+H Q+ +GL Q ++++ S SL LF +
Sbjct: 30 ESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKED 89
Query: 116 IQEPDA-FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
++ DA FM N++++ + A+ Y +M+ V NHYTFP + C I +
Sbjct: 90 VRSDDALFMLNSLIRGYSSAGLGREAI-LLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFC 148
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG +VH +VK G E D+F++N LIH Y+ CG + KVFE
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEG----------------- 191
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM--EAANGLFDLMPFRDVVSWNCMI 292
M ER++ +W S+I GY GD EA + F+++ + V N ++
Sbjct: 192 --------------MSERNVVSWTSLICGYAR-GDRPKEAVSLFFEML---NKVMVNALV 233
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
D Y K G + +A+ FD RN+V +N +L+ Y R E L + D M++ +P+
Sbjct: 234 DMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRV 293
Query: 353 SLMSVLTACANM-----GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+++S ++A A + G + G W+H+YI+K I D+ L+T+L+ M+A+CG A
Sbjct: 294 TMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQ 353
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ MTE++V +W + I M G GE A +F +M +G P+ F+ VL+AC+H G
Sbjct: 354 VFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQ 413
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V +G F LM+ + I P++EHYGCMVDLLGRAGL+R++ +L+ +PME +WG+LL
Sbjct: 414 VEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 472
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+AC H N E+ A+ + EL P+ G +VLLSNIYAS GKW +V +R ++EK + K
Sbjct: 473 AACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRK 532
Query: 588 AVGSSLVH 595
GSS V
Sbjct: 533 VPGSSSVQ 540
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 318/582 (54%), Gaps = 28/582 (4%)
Query: 29 KTPPKL---WANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
K P L + N KP N R + D + +LQ+ C ++K+ QIH QLL + +
Sbjct: 5 KASPHLISRYLNLQKPHSKPNPN-RQALSDKFNSLLQQ---CLSIKQLKQIHAQLLTNSI 60
Query: 86 SQ-DSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF-LMLNDPFGALSF 143
+ +SF L K+ L + + +FF I +P + N +++ N AL F
Sbjct: 61 HKPNSF-----LYKIA-DLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEF 114
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y +M ++ N+ T+P L C+ + ++ G+ H +++ G + D V +SLI MY+
Sbjct: 115 Y-SRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYA 173
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG++ DARKVF++ DLV+WNSMI GY K R G A LF M E + S
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWN-----CMIDGYAKIGNVTSARNCFDRMCMR 314
++ ++GD++ + + + + ++ N +I Y K G++ SAR FD M +
Sbjct: 234 VLGACGELGDLKLGTWVEEFV-VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKK 292
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+ V+WN ++ Y + E ++LF M P++ +L+ +L+ACA++G +D+G+ +
Sbjct: 293 DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVE 352
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
Y + + DV + T+L+ MYAKCG +D A VF M KN VSWN+MI HGQ +
Sbjct: 353 IYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQ 412
Query: 435 KALEMFMEMEKRGPT--PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
+AL +F M G T PND TF+ VLSAC HAG+V EG F +M + + PK+EHY
Sbjct: 413 EALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYS 472
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVDL RAG + ++ + V +P + + GALL AC N ++ + V + L+ELEP
Sbjct: 473 CMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPS 532
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ G YV+ S +YA+ +WD+ +R +MK+K + K G S +
Sbjct: 533 NSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWI 574
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 301/545 (55%), Gaps = 20/545 (3%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L++CS ++E ++H Q++ G S DSF + L + V S FD I + +
Sbjct: 145 LKACSELRETDEGRKLHCQIVKVG-SPDSFVLTG-LVDMYAKCREVEDSRRVFDEILDRN 202
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+C T M + ND + +M VE N YT L C + +L +GK VH
Sbjct: 203 V-VCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVH 261
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
++K GF+L+ F+ L+ +Y CG++ DA VF++ DLV+W +MI GY + G
Sbjct: 262 GYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQR---G 318
Query: 241 FARELFD-FMPER------DIFTWNSMISGYVDVGDMEAANGLFDL---MPFRDVVSWNC 290
+ RE F ER + T +S++S G + + L + D N
Sbjct: 319 YPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENA 378
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
++D YAK + AR F+ + ++V++WN +++ Y + E L LFD+M P+
Sbjct: 379 LVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPD 438
Query: 351 EASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+L+SVL+ACA++G +G +H Y I+ + V + T+LL YAKCG + AR +F
Sbjct: 439 AITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIF 498
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D M EKN ++W++MI GYG+ G ++LE+F +M K PN+ F +LSAC+H+GM+
Sbjct: 499 DEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLG 558
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EGW YF+ M ++Y P ++HY CMVDLL RAG + ++ + + K+P++ +L GA L
Sbjct: 559 EGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHG 618
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C HS +LG++ + ++EL P YVL+SN+YASEG+W + + +MK++ L K
Sbjct: 619 CRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLP 678
Query: 590 GSSLV 594
G SLV
Sbjct: 679 GWSLV 683
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 225/447 (50%), Gaps = 30/447 (6%)
Query: 42 KFTDTDNQRLPIVDL---------SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAA 92
T T QR P +D S+P L C TV +IH L+V GLS+D
Sbjct: 15 NLTVTALQRTPEIDRTIASIQSISSNPCFSLLGICKTVSSLRKIHALLVVHGLSEDLLCE 74
Query: 93 SRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGAL-SFYYEKMMAK 151
++ L L S V + L FD I+ PD + +++ + LND + + FY ++
Sbjct: 75 TK-LVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYF-LNDSYSEIVQFYNTRLRKC 132
Query: 152 FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA 211
E+++ F ++ K C+ +R EG+K+H +IVK G D FV L+ MY+ C EV D+
Sbjct: 133 LNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDS 191
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDV 267
R+VF++ ++V W SMI GYV+N + LF+ M E + +T S+++ +
Sbjct: 192 RRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKL 251
Query: 268 GDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
G + + FDL F ++D Y K G++ A + FD + ++VSW
Sbjct: 252 GALHQGKWVHGYVIKSGFDLNSFLVTP----LLDLYFKCGDIRDAFSVFDELSTIDLVSW 307
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
++ Y + E L+LF D PN + SVL+ACA G +++G+ +H K
Sbjct: 308 TAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIK 367
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
D +L+ MYAKC ++ AR VF+ + +K+V++WNS+I GY +G +ALE+
Sbjct: 368 LG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALEL 426
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAG 466
F +M P+ T + VLSAC G
Sbjct: 427 FDQMRSDSVYPDAITLVSVLSACASVG 453
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 196/549 (35%), Positives = 289/549 (52%), Gaps = 72/549 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS--LSSVSLSVLFFDGIQEPDA 121
LE C V Q H Q+ +GL ++FA SR+L C+ S++ + F+ I P
Sbjct: 12 LEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLA-FCSHPYQGSLTYACRVFERIHHPTL 70
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
+CNTI+K+FL+ + +G + KM+ + ++YT P + K CA +LR+
Sbjct: 71 CICNTIIKTFLVNGNFYGTFHVF-TKMLHNGLGPDNYTIPYVLKACA---ALRD------ 120
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+ M+ GY + F
Sbjct: 121 ------------------------------------------CSLGKMVHGYSSKLGLVF 138
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
DIF NS+++ Y GD+ AA +FD MP VSW+ MI GYAK+G+V
Sbjct: 139 -----------DIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDV 187
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
SAR FD ++ W +++ YV+ + E L LF + P+E+ +S+L+AC
Sbjct: 188 DSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSAC 247
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A++G +DIG WIH Y+ + + + LSTSLL MYAKCG ++LA+ +FD+M E+++V WN
Sbjct: 248 AHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWN 307
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+MI G MHG G AL+MF EMEK G P+D TFI V +AC+++GM EG D M +
Sbjct: 308 AMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSL 367
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA-----LWGALLSACSTHSNS 536
Y+IEPK EHYGC+VDLL RAGL ++ ++ ++ + W A LSAC H +
Sbjct: 368 YEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQA 427
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
+L + A+ L+ LE G YVLLSN+YA+ GK + +R +M+ K ++KA G S V
Sbjct: 428 QLAERAAKRLLRLE-NHSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDKAPGCSSVEI 486
Query: 597 GEFASESIV 605
SE I
Sbjct: 487 DGVVSEFIA 495
>gi|356507694|ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 535
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 287/544 (52%), Gaps = 49/544 (9%)
Query: 67 CSTVKEFHQIHTQLLVSGL-SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCN 125
CS + E Q+ + +GL S F A + + + ++S + F ++F+CN
Sbjct: 16 CSML-ELKQVQAIITKAGLHSHLPFTAKLIFFSALSPMGNLSHAHSLFLQTSMHNSFICN 74
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS------------- 172
T++++F + P AL + Y M V +H+T+ + K C+
Sbjct: 75 TMIRAFANSSYPLQAL-YIYNHMHTTNVVSDHFTYNFVLKACSRAHKFAQEFVKCDEFII 133
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ +G +VH ++K G + D ++NSL+ MYS CG V
Sbjct: 134 ISKGGEVHCTVLKLGLDQDPSIQNSLLCMYSQCGLV------------------------ 169
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
A+ LFD + R + +WN MIS Y V D ++A+ L + MP ++VVSWN +I
Sbjct: 170 -------HVAQHLFDEISNRSLVSWNIMISAYDRVNDSKSADYLLESMPHKNVVSWNTVI 222
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
Y ++G++ AR F M R+ VSWN L+A V KDY + LF M + +P E
Sbjct: 223 GRYIRLGDIEGARRVFQIMPQRDAVSWNSLIAGCVSVKDYEGAMGLFSEMQNAEVRPTEV 282
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+SVL ACA G +++G IH ++ C K + L +LL MY+KCG ++ A VF+ M
Sbjct: 283 TLISVLGACAETGALEMGSKIHESLKACGHKIEGYLGNALLNMYSKCGKLNSAWEVFNGM 342
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT--PNDATFICVLSACTHAGMVLE 470
K + WN+MI+G +HG E+AL++F EME T PN TF+ VL AC+H G+V +
Sbjct: 343 RIKTLSCWNAMIVGLAVHGYCEEALQLFSEMESGLDTVRPNRVTFLGVLIACSHKGLVDK 402
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
W FD M + YKI P ++HYGC+VDLL R GL+ ++ +++ P++ LW LL AC
Sbjct: 403 ARWNFDHMAKQYKILPDIKHYGCIVDLLSRFGLLEEAHQMIKTAPLQNSAILWRTLLGAC 462
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
T N EL K+ Q L +L G YVLLSNIYA +WDEVE +R M + K V
Sbjct: 463 RTQGNVELAKVSFQQLAKLGRLTDGDYVLLSNIYAEAERWDEVERVRSEMIGLHVPKQVA 522
Query: 591 SSLV 594
S +
Sbjct: 523 YSQI 526
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 303/567 (53%), Gaps = 75/567 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS---VSLSVLFFDGIQEPD 120
E C ++ + Q H+Q++ GLS + ++ C S+ ++ ++ FD I +PD
Sbjct: 29 FEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLIN-FCARASTSDALTYALKLFDSIPQPD 87
Query: 121 AFMCNTIMKSFLMLND-PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
AF+ NTI+K FL P ++ Y M+ V N++TFP L C R ++ G ++
Sbjct: 88 AFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIAC---RKIQHGMQI 144
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA + K GF NSLIHMY VT+ ++ +
Sbjct: 145 HAHLFKFGFGAHSVCLNSLIHMY---------------------VTFQALEE-------- 175
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR +F +P D +W S+ISGY G ++ A +F LMP ++ SWN M+ Y +
Sbjct: 176 --ARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTN 233
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
A FDRM N N +L +V ++L+
Sbjct: 234 RFHEAFALFDRMKAEN----NNVLDKFVA--------------------------TTMLS 263
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE--KNV 417
AC +G +D G+WIH YI++ I+ D L+T+++ MY KCG ++ A VF ++ + +
Sbjct: 264 ACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWI 323
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
SWN MI G MHG GE A+++F EME++ P+D TF+ +L+AC H+G+V EG YF
Sbjct: 324 SSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSY 383
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M R+Y IEP++EH+GCMVDLLGRAG++ ++ +L+ ++P+ + G LL AC H N E
Sbjct: 384 MIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIE 443
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
LG+ + + ++ELEP + G YVLL+N+YA+ GKW++ +R++M ++ ++KA G S++
Sbjct: 444 LGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQ 503
Query: 598 EFASESIV-ENCPPHRKCI---VYSML 620
E I E P K + VY ML
Sbjct: 504 GTVHEFIAGERNHPQAKELHAKVYEML 530
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 296/553 (53%), Gaps = 64/553 (11%)
Query: 43 FTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS 102
T N L + L +P L LE CS ++ IH +L + L D FAASR++ S
Sbjct: 3 ITSGSNSILKTLRLKNPKLVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDS 62
Query: 103 LSSV-SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
+++ ++ IQ P+ F+ N +++ +P + +Y
Sbjct: 63 TTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYY----------------- 105
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
I++LR G + +++ H + ++ A E+ P+
Sbjct: 106 --------IKALRFG----------------LLPDNITHPF-----LVKACAQLENAPMG 136
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
++ G+ E+D + NS++ Y VGD+ AA +F M
Sbjct: 137 MQTHGQAIKHGF-----------------EQDFYVQNSLVHMYASVGDINAARSVFQRMC 179
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
DVVSW CMI GY + G+ SAR FDRM RN+V+W+ +++ Y R + + + F+
Sbjct: 180 RFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEA 239
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
+ NE ++ V+++CA++G + +G+ H Y+ + ++ +++L T+++ MYA+CG
Sbjct: 240 LQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGN 299
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
++ A VF+ + EK+V+ W ++I G MHG EKAL F EM K+G P D TF VL+A
Sbjct: 300 VEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTA 359
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C+HAGMV G F+ M+R + +EP++EHYGCMVDLLGRAG +R +E+ V K+P++
Sbjct: 360 CSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAP 419
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+W ALL AC H N E+G+ V + L+E++P G YVLLSNIYA KW +V +R++MK
Sbjct: 420 IWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMK 479
Query: 582 EKELEKAVGSSLV 594
+K + K G SL+
Sbjct: 480 DKGVRKPPGYSLI 492
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 304/536 (56%), Gaps = 22/536 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFL 132
+IH+ +L++G + + ++ C ++ +LS+ F D E + F N I+ F+
Sbjct: 58 EIHSYMLINGFLNSPLSITSLINMYSKCNQMN-FALSI-FSDPTHEINVFAFNAIISGFI 115
Query: 133 MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
P FY +KM + V + +TFP K C + + KK+H + K G ELD+
Sbjct: 116 TNGFPEEGFEFY-QKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDV 171
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
F+ ++L++ Y G + A+ FE+ P+ D+V WN+M++GY + + E F M +
Sbjct: 172 FIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDE 231
Query: 253 DI----FTWNSMISGYVDVGDMEAA---NGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
+ FT ++S + +GD+ +G M + V N +ID Y K + A
Sbjct: 232 SVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDA 291
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
F+ M +++ SWN +++++ +C D+ LRL DRM+ +P+ ++ +VL AC+++
Sbjct: 292 LEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHL 351
Query: 365 GVIDIGQWIHSYI------QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+ G+ IH Y+ + + DVLL +++ MYAKCG M A VF+ M+ K+V
Sbjct: 352 AALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVA 411
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SWN MIMGYGMHG G +ALEMF M + P++ TF+ VLSAC+HAG V +G + M
Sbjct: 412 SWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQM 471
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ Y + P +EHY C++D+LGRAG + ++ EL +P+EA P +W ALL+AC H ++ L
Sbjct: 472 KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVL 531
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ AQ + ELEP G YVL+SN+Y + G+++EV +R M+++ + K G S +
Sbjct: 532 AEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWI 587
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 179/405 (44%), Gaps = 31/405 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+++C V E +IH L GL D F S L + + + F+ + D +
Sbjct: 146 IKACLDVLEIKKIHGLLFKFGLELDVFIGS-ALVNCYLKFGLMEHAQVAFEELPIRDVVL 204
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + F + + +M + V + +T + V A + L G+ +H
Sbjct: 205 WNAMVNGYAQIGQ-FEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA 263
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G++ + V NSLI MY C + DA ++FE D+ +WNS++ + + +
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 244 ELFDFM----PERDIFTWNSM---------------ISGYVDVGDMEAANGLFDLMPFRD 284
L D M + D+ T ++ I GY+ V + D D
Sbjct: 324 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID-----D 378
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V+ N +ID YAK G++ A F+RM ++V SWNI++ Y E L +F RM
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
KP+E + + VL+AC++ G + G+ ++ K + P + T ++ M + G +D
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 404 LARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
A + M E N V W +++ +H E A + E+E
Sbjct: 499 EAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELE 543
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 235/378 (62%)
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E D + +S+I Y + D+ AA LF+L RDVVSWN MIDGY K + AR FDR
Sbjct: 198 ECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDR 257
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+V+SWN ++ Y C E L LFD+M KP EA+++S+L+ACA++G +D G
Sbjct: 258 MVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 317
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+H+YI RI+ + ++ T+L+ MYAKCG + LA VF+ M K+V++WN++I G +H
Sbjct: 318 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 377
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G ++A ++F EM++ G PND TF+ +LSAC+HAGMV EG D M Y IEPKVEH
Sbjct: 378 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEH 437
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGC++DLL RAG + ++ EL+ +PME P+ GALL C H N ELG++V + L+ L+
Sbjct: 438 YGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQ 497
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P G Y+LLSNIYA+ KWD+ +R +MK + K G S++ + +
Sbjct: 498 PCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSH 557
Query: 611 HRKCIVYSMLGEIGAQMK 628
+Y L EI ++K
Sbjct: 558 PESNKIYEKLNEIHTRLK 575
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 42/416 (10%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL C T++ Q+H Q++ S +A L L + ++ + F +Q P
Sbjct: 70 ILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNP 129
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N+++++ P AL Y+ M+ ++ +H T+P + K C G V
Sbjct: 130 PPSLYNSLIRALSSSKTPLEALPLYH-TMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 188
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +VK GFE D ++ +SLIH+Y+ ++ A+++F D+V+WN+MIDGYVK+ E+
Sbjct: 189 HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 248
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV-------------- 285
G AR +FD M RD+ +WN+MI+GY G A LFD M V
Sbjct: 249 GHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSAC 308
Query: 286 -------------------------VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
+ ++D YAK G ++ A F+ M ++V++WN
Sbjct: 309 AHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWN 368
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC 380
++A + E +LF M +PN+ + +++L+AC++ G++D GQ + +
Sbjct: 369 TIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSS 428
Query: 381 R-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGE 434
I+P V ++ + A+ G ++ A + M E N + +++ G +HG E
Sbjct: 429 YGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFE 484
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 260/430 (60%), Gaps = 4/430 (0%)
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L+E +++ +I E D N+++ Y + A+ FED P+ D +WN+MI G
Sbjct: 23 LKEAQELFVKIP----EPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITG 78
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
+ +N+++ AR+LF MP +++ TWN+MISGYV+ GD+++A LF+ PF+ VV+W MI
Sbjct: 79 FAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMI 138
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
GY K+G + A F++M +N+V+WN ++A Y+ + ++LF M+ +PN +
Sbjct: 139 TGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSS 198
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L S L C+ + + +G+ +H + K + D TSL++MY KCGV++ +F +
Sbjct: 199 TLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQV 258
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++VV+WN+MI GY HG+G+KAL +F EM ++G P+ TF+ VL AC HAG G
Sbjct: 259 PRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGV 318
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M + Y + K +HY CMVDLLGRAG + ++ +L+ K+P + A++G LL AC
Sbjct: 319 KYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRI 378
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N+E+ + +Q L+ L+P YV L+N+YA+ +WD V +R+ MK ++ K G S
Sbjct: 379 HKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYS 438
Query: 593 LVHPGEFASE 602
+ A +
Sbjct: 439 WIEVKSMAHQ 448
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 53/346 (15%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F I EPDA NT++ ++ ++ A +F +E M K P + G
Sbjct: 29 LFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF-FEDMPIK-------DTPSWNTMITGFA 80
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++ K + + ++ N++I Y CG++ A K+FE P +V W +MI
Sbjct: 81 QNQQMDKARDLFLIMPTK-NVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMIT 139
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM----------- 280
GY+K +G A LF+ MPE+++ TWN+MI+GY++ E LF M
Sbjct: 140 GYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSST 199
Query: 281 ---------------------------PF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
P D + +I Y K G + F ++
Sbjct: 200 LSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVP 259
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-Q 371
R+VV+WN +++ Y + + + L LFD MI KP+ + ++VL AC + G D+G +
Sbjct: 260 RRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVK 319
Query: 372 WIHSYIQKCRI--KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+ HS + + KPD T ++ + + G + A ++ + M K
Sbjct: 320 YFHSMAKDYGLVAKPDHY--TCMVDLLGRAGKLVEAVDLIEKMPFK 363
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 30/284 (10%)
Query: 280 MPFRDVVSWNCMIDGYAKI-GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
M + V+WN ++ G +K G + A+ F ++ + VS+N +L+ YVR +
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 339 FDRMIRGDAKPNEASLMSVLTACANM-------------GVIDIGQWIHSYI-------- 377
F+ M D P+ ++++ M V+ I Y+
Sbjct: 61 FEDMPIKDT-PSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSA 119
Query: 378 ----QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+K K V+ T+++T Y K G + LA +F+ M EKN+V+WN+MI GY + +
Sbjct: 120 LKLFEKAPFK-SVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRA 178
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
E +++F M G PN +T L C+ + G L+ + +
Sbjct: 179 EDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTS- 237
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
++ + + G++ D +L ++P W A++S + H +
Sbjct: 238 LISMYCKCGVLEDGWKLFVQVPRR-DVVTWNAMISGYAQHGEGK 280
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF-- 160
L + L+ F+ + E + N ++ ++ + + + M+ ++ N T
Sbjct: 144 LGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLF-RTMVGFGIQPNSSTLSS 202
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
LLG C+ + +L+ G++VH + K D SLI MY CG + D K+F P
Sbjct: 203 ALLG--CSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR 260
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMI-----SGYVDVGDME 271
D+VTWN+MI GY ++ E A LFD M E+ D T+ +++ +G+ D+G
Sbjct: 261 RDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKY 320
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
+ D + CM+D + G + A + ++M
Sbjct: 321 FHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKM 360
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 258/429 (60%), Gaps = 10/429 (2%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G DA ++F + P ++V++ +M+DG + EV ARE+FD MP+R++ +W +MISGYV
Sbjct: 125 GRADDADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYV 184
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+ G A LF+ MP ++VV+ MI Y K G+V SAR FD + ++V+SWN ++A
Sbjct: 185 ENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAG 244
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
YV E +RL M R KP+ A+L++VLTAC+ + ++ G+ H+ K ++
Sbjct: 245 YVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESG 304
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+ S +L+TMY+KCG + + VF N+ K++VSWN++I Y HG+ +K + +F EME
Sbjct: 305 ISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEM 364
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G P+D TF+ VLSAC H G V FDLM Y I P+ EHY C+VD+L RAG +
Sbjct: 365 TGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLE 424
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+ + +P+EA +WG+LL AC H N +LG++ A+ L++ + GPYV+LSNIYA
Sbjct: 425 KASSYIKDMPLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYA 484
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-----ENCPPHRKCIVYSML 620
+ G W +V +R MKE+ ++K G S E A+E + + P RK I S L
Sbjct: 485 AAGMWGQVNQVRGQMKERGVKKQPGYSWT---EIANEVHMFVGGDASHPEMRKII--SEL 539
Query: 621 GEIGAQMKM 629
+I M+M
Sbjct: 540 RKISFHMRM 548
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 170/395 (43%), Gaps = 64/395 (16%)
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG--NVTSARN 306
+ R + N IS GD+ AA +FD MP RDVVSWN ++ + G ++ +AR
Sbjct: 10 LAARRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARR 69
Query: 307 CFDRM---------------CM-----------------RNVVSWNILLALYVRCKDYCE 334
FD C+ RNV +WN +LA +R +
Sbjct: 70 LFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADD 129
Query: 335 CLRLFDR-----------MIRGDAKPNE-ASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
RLF M+ G A+ E A V A + ++ I Y++
Sbjct: 130 ADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMF 189
Query: 383 -----------KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+ +V+ T+++T Y K G ++ AR +FD + K+V+SWN+MI GY +G
Sbjct: 190 VEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNG 249
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
GE+A+ + M + G P+ AT I VL+AC+ ++ +G + + +E +
Sbjct: 250 HGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAM-LESGISFS 308
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ-HLMELE 550
++ + + G + +SE + L + W +++A + H + K++A H ME+
Sbjct: 309 NALMTMYSKCGNVGESELVFINLRTK-DIVSWNTIIAAYAQHGKYQ--KVIALFHEMEMT 365
Query: 551 PRDPGPYVLLSNIYA--SEGKWDEVENLRRIMKEK 583
P LS + A GK D L +M K
Sbjct: 366 GLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSK 400
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDGI+ D NT++ ++ A+ + M + V+ +H T + C+ +
Sbjct: 226 LFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLH-AVMFREGVKPDHATLIAVLTACSALA 284
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
LR+GK HA +K E + N+L+ MYS CG V ++ VF + D+V+WN++I
Sbjct: 285 LLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIA 344
Query: 232 GYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
Y ++ + LF M D T+ S++S VG ++A+ LFDLM + +S
Sbjct: 345 AYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAIS 404
Query: 288 -----WNCMIDGYAKIGNVTSARNCFDRMCM---RNVVSWNILL 323
+ C++D ++ G + A + M + +NV W LL
Sbjct: 405 PRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKNV--WGSLL 446
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 251/425 (59%), Gaps = 1/425 (0%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G + ARK+FE PV D+++W +MI G +N V A LFD MPER++ +WN+MISGY
Sbjct: 180 GSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYA 239
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+E A LF MP RDV SWN MI G+ + ++ SAR FD M RNV++W ++
Sbjct: 240 RNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNG 299
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y++C L+LF+ M+ +PN+ + + L AC+N+ + GQ +H I K + D
Sbjct: 300 YLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFD 359
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+ ++L+ +YAKCG + LARNVFD EK+++SWN +I Y HG G +A+ ++ M++
Sbjct: 360 TFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQE 419
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G PNDAT++ +LSAC+HAG+V EG F+ M + I + EHY C+VDL RAG +
Sbjct: 420 NGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLE 479
Query: 506 DSEELVSKLPME-AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
D++ L+S ++ +W ALL C++H N +G + A+HL+E EP + G Y LL NIY
Sbjct: 480 DAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIY 539
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIG 624
AS GKW E +R M + L+K G S + + + ++ +L +I
Sbjct: 540 ASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINDLLQDIH 599
Query: 625 AQMKM 629
M+M
Sbjct: 600 RIMRM 604
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 174/358 (48%), Gaps = 32/358 (8%)
Query: 203 SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE--RDIFTWNSM 260
+ G V DAR++F+ P D+V+W +M+ Y + + AR LFD P+ R++ TW ++
Sbjct: 52 AAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFD-RPDARRNVVTWTAL 110
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
+SGY ++ A LF+ M R+VVSWN M++ Y +G V A F+RM +R+ SWN
Sbjct: 111 LSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWN 170
Query: 321 ILLALYVRCKDYCECLRLFDR-----------MIRGDAKPNEASLMSVL-TACANMGVID 368
ILL VR ++F+R MI G A+ VL A V+
Sbjct: 171 ILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVS 230
Query: 369 IGQWIHSYIQKCRIKPDVLLSTS-----------LLTMYAKCGVMDLARNVFDNMTEKNV 417
I Y + RI+ + L T ++T + + + AR +FD M ++NV
Sbjct: 231 WNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNV 290
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
++W +M+ GY Q E AL++F M +G PN TF+ L AC++ + EG +
Sbjct: 291 ITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEG---QQV 347
Query: 478 MQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
Q I K + + + +++L + G +R + V ME W +++A + H
Sbjct: 348 HQMICKTPSQFDTFVESTLMNLYAKCGEIRLARN-VFDFSMEKDLISWNGIIAAYAHH 404
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + + T+M +L AL + M+ + ++ N TF C+ +
Sbjct: 281 LFDEMPKRNVITWTTMMNGYLQCMQSEMALKLF-NCMLVQGIQPNQVTFLGSLDACSNLA 339
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L EG++VH I K + D FV ++L+++Y+ CGE+ AR VF+ DL++WN +I
Sbjct: 340 ALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIA 399
Query: 232 GYVKNREVGFARE---LFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
Y + GF E L+ M E + T+ ++S G ++ +F+ M +
Sbjct: 400 AYAHH---GFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDN 456
Query: 285 VV-----SWNCMIDGYAKIGNVTSAR 305
+ + C++D ++ G + A+
Sbjct: 457 SIVVRDEHYTCLVDLCSRAGRLEDAK 482
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 302/564 (53%), Gaps = 50/564 (8%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F + EPD N+++ F +D F Y+ KM + N Y+F CAG+
Sbjct: 103 LFGSMPEPDQCSWNSMVSGFAQ-HDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLM 161
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L G +VHA + K + D+++ ++LI MYS CG V A +VF +LVTWNS+I
Sbjct: 162 DLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLIT 221
Query: 232 GYVKNREVGFARELFDFM------PER--------------------------------- 252
Y +N A E+F M P+
Sbjct: 222 CYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFR 281
Query: 253 -DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
D+ N+++ Y + A +FD M R+VVS M+ GYA+ +V +AR F +M
Sbjct: 282 DDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKM 341
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
RNVVSWN L+A Y + + E LRLF + R P + ++L+ACAN+ + +G+
Sbjct: 342 TQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGR 401
Query: 372 WIHSYIQK------CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
H+++ K + D+ + SL+ MY KCG ++ VF+ M E++ VSWN++I+
Sbjct: 402 QAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIV 461
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY +G G +AL++F +M G P+ T I VL AC+HAG+V EG YF M+ + +
Sbjct: 462 GYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLI 520
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P +HY CMVDLLGRAG + +++ L+ +P+ +WG+LL+AC H N E+GK A+
Sbjct: 521 PLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEK 580
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
L+E++P + GPYVLLSN+YA G+W +V +R++M+++ + K G S + +V
Sbjct: 581 LLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLV 640
Query: 606 EN-CPPHRKCIVYSMLGEIGAQMK 628
++ PHRK I YS+L + QMK
Sbjct: 641 KDKSHPHRKQI-YSVLKMLTEQMK 663
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 209/448 (46%), Gaps = 77/448 (17%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N F L C RS R + VHARI+ F +++F++N LI +Y C + DARK+F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME---- 271
+ P + TWNS+I K+ + A LF MPE D +WNSM+SG+ E
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLE 133
Query: 272 ----------------------AANGLFDL-------------MPFRDVVSWNCMIDGYA 296
A GL DL DV + +ID Y+
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYS 193
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G+V A F M RN+V+WN L+ Y + E L +F RM+ +P+E +L S
Sbjct: 194 KCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLAS 253
Query: 357 VLTACANMGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFD----- 410
V++ACA++ + G IH+ + K + + D++L +L+ MYAKC ++ AR VFD
Sbjct: 254 VVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR 313
Query: 411 --------------------------NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
MT++NVVSWN++I GY +G+ E+AL +F ++
Sbjct: 314 NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLK 373
Query: 445 KRGPTPNDATFICVLSACTH-AGMVLEGWWYFDLMQRIYKIEPKVEH----YGCMVDLLG 499
+ P TF +LSAC + A ++L + ++++ ++ + E ++D+
Sbjct: 374 RESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYM 433
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALL 527
+ G + D + K+ E W A++
Sbjct: 434 KCGSIEDGSRVFEKMK-ERDCVSWNAII 460
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/630 (32%), Positives = 335/630 (53%), Gaps = 52/630 (8%)
Query: 52 PIVDL--SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSL 108
P VDL +HP L LE C++ +F QI ++ + L +F SR+L S ++ L
Sbjct: 24 PTVDLKLNHPSLILLEKCNSRTQFKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLEL 83
Query: 109 SVLFFDGIQE-PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
++L F+ P+ ++ NT++ F N+ + Y M+ + TF L +
Sbjct: 84 AILLFNHFTPYPNLYIFNTMILGFPFSNEKAFTI---YRSMLQNGTYPDRQTFLYLLQTT 140
Query: 168 AGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
+ + E K++H + G + ++RNSLI Y G AR++F++ ++V++
Sbjct: 141 ---KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSY 197
Query: 227 NSMIDGYVKNREVGFARELFDFMP----ERDIFT-------------------------- 256
N+MI G+ K + ELF M E D FT
Sbjct: 198 NTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEK 257
Query: 257 ---------WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
+N+++ YV +++ A +FD +D VSWN +I GYAK+G + A +
Sbjct: 258 SIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDL 317
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+++ R++VSWN L++ Y + DY LF RM + KP++ +++++++A A MG +
Sbjct: 318 FNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGAL 377
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D G+WIH K K + ++L+ MY KCG ++ A +F+ + EK+V +W +MI G+
Sbjct: 378 DQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGF 437
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG G KALE+F M+ PND TF+ VL+AC+H+G+V EG F M++ Y IEP
Sbjct: 438 AFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPG 496
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
VEHYGC+VDLL R+G + D+ ++ K+PME ++WGA+LSAC H N EL + L+
Sbjct: 497 VEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELL 556
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
+LEP G Y+LLSN+YA+ G+W +++R +M + ++K G S V + N
Sbjct: 557 KLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASN 616
Query: 608 CPPHRKCIVYSMLGEIGAQMKMCRRDVASQ 637
R + S+L + +M++ DV S+
Sbjct: 617 KQHPRWMDICSILSFLTNEMRL-EADVPSK 645
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 304/536 (56%), Gaps = 22/536 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFL 132
+IH+ +L++G + + ++ C ++ +LS+ F D E + F N I+ F+
Sbjct: 58 EIHSYMLINGFLNSPLSITSLINMYSKCNQMN-FALSI-FSDPTHEINVFAFNAIISGFI 115
Query: 133 MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
P FY +KM + V + +TFP K C + E KK+H + K G ELD+
Sbjct: 116 TNGFPEEGFEFY-QKMRNEGVIPDKFTFPCAIKACLDVL---EIKKIHGLLFKFGLELDV 171
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
F+ ++L++ Y G + A+ FE+ P+ D+V WN+M++GY + + E F M +
Sbjct: 172 FIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDE 231
Query: 253 DI----FTWNSMISGYVDVGDMEAA---NGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
+ FT ++S + +GD+ +G M + V N +ID Y K + A
Sbjct: 232 SVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDA 291
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
F+ M +++ SWN +++++ +C D+ LRL DRM+ +P+ ++ +VL AC+++
Sbjct: 292 LEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHL 351
Query: 365 GVIDIGQWIHSYI------QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+ G+ IH Y+ + + DVLL +++ MYAKCG M A VF+ M+ K+V
Sbjct: 352 AALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVA 411
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SWN MIMGYGMHG G +ALEMF M + P++ TF+ VLSAC+HAG V +G + M
Sbjct: 412 SWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQM 471
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ Y + P +EHY C++D+LGRAG + ++ EL +P+EA P +W ALL+AC H ++ L
Sbjct: 472 KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVL 531
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ AQ + ELEP G YVL+SN+Y + G+++EV +R M+++ + K G S +
Sbjct: 532 AEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWI 587
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 179/405 (44%), Gaps = 31/405 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+++C V E +IH L GL D F S L + + + F+ + D +
Sbjct: 146 IKACLDVLEIKKIHGLLFKFGLELDVFIGS-ALVNCYLKFGLMEHAQVAFEELPIRDVVL 204
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + F + + +M + V + +T + V A + L G+ +H
Sbjct: 205 WNAMVNGYAQIGQ-FEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA 263
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G++ + V NSLI MY C + DA ++FE D+ +WNS++ + + +
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 244 ELFDFM----PERDIFTWNSM---------------ISGYVDVGDMEAANGLFDLMPFRD 284
L D M + D+ T ++ I GY+ V + D D
Sbjct: 324 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID-----D 378
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V+ N +ID YAK G++ A F+RM ++V SWNI++ Y E L +F RM
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
KP+E + + VL+AC++ G + G+ ++ K + P + T ++ M + G +D
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 404 LARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
A + M E N V W +++ +H E A + E+E
Sbjct: 499 EAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELE 543
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 267/443 (60%), Gaps = 4/443 (0%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++ N+++ G V+DA+++F++ P ++V++ +M+D + EV ARE+FD
Sbjct: 108 ERNVATWNAMLAGLVRLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDS 167
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MP+R++ +W +MISG V+ G A LF+ MP ++VV+ MI G+ K G+V SAR F
Sbjct: 168 MPDRNLVSWAAMISGCVENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLF 227
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D + ++V+SWN ++A YV E +RL M R KP+ A+L++VLTAC+ + ++
Sbjct: 228 DGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLR 287
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ H+ K ++ + S +L+TMY+KCG + + VF N+ K++VSWN++I Y
Sbjct: 288 QGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYA 347
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG+ +K + +F EME G P+D TF+ VLSAC H GMV FDLM Y I P+
Sbjct: 348 QHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRA 407
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHY C+VD+L RAG + + + +P++A +WG+LL AC H N +LG++ A+ L++
Sbjct: 408 EHYACIVDILSRAGQLEKASSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQ 467
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+ + GPYV+LSNIYA+ G W +V +R MKE+ ++K G S G + +
Sbjct: 468 SDSQSSGPYVILSNIYAAAGMWGQVNQIRGQMKERGVKKQPGYSWTEIGNEVHMFVGGDA 527
Query: 609 --PPHRKCIVYSMLGEIGAQMKM 629
P RK I S L +I M+M
Sbjct: 528 SHPEMRKII--SELRKISFHMRM 548
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 194/379 (51%), Gaps = 18/379 (4%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK--NREVGFARELFD-F 248
L N I + G+V AR+VF+ D+V+WN+++ + + AR LFD
Sbjct: 15 LLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLFDEA 74
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MP RD+ +WNS+I+G + GD++AA+ F P R+V +WN M+ G ++G V A+ F
Sbjct: 75 MPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLF 134
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV-I 367
D M RNVVS+ ++ R + +FD M N S ++++ C G+ +
Sbjct: 135 DEMPERNVVSYTTMVDWLARRGEVERAREVFDSM----PDRNLVSWAAMISGCVENGMFV 190
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+ + + +K +V+ T+++T + K G +D AR +FD + K+V+SWN+MI GY
Sbjct: 191 EARELFEAMPEK-----NVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGY 245
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+G GE+A+ + M + G P+ AT I VL+AC+ ++ +G + + +E
Sbjct: 246 VHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAM-LESG 304
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ-HL 546
+ ++ + + G + +SE + L + W +++A + H + K++A H
Sbjct: 305 ISFSNALMTMYSKCGNVGESELVFINLRTK-DIVSWNTIIAAYAQHGKYQ--KVIALFHE 361
Query: 547 MELEPRDPGPYVLLSNIYA 565
ME+ P LS + A
Sbjct: 362 MEVTGLIPDDITFLSVLSA 380
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDGI+ D N ++ ++ A+ + M + V+ +H T + C+ +
Sbjct: 226 LFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLH-ALMFREGVKPDHATLIAVLTACSALA 284
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
LR+GK HA +K E + N+L+ MYS CG V ++ VF + D+V+WN++I
Sbjct: 285 LLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIA 344
Query: 232 GYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
Y ++ + LF M D T+ S++S VG ++A+ LFDLM + +S
Sbjct: 345 AYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAIS 404
Query: 288 -----WNCMIDGYAKIGNVTSARNCFDRMCMR 314
+ C++D ++ G + A + M ++
Sbjct: 405 PRAEHYACIVDILSRAGQLEKASSYIKHMPLK 436
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 305/542 (56%), Gaps = 14/542 (2%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L++C+ + Q +H ++ GL + + + +L + T S+ ++ F+ ++ +
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS-MYTKCGSMEDALEVFNLVKGRN 371
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
++ F A F+ KM+ +E N TF + C+ +L++G+++H
Sbjct: 372 VVSWTAMIAGFAQHGRMEEAFLFF-NKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
RI+K G+ D VR +L+ MY+ CG ++DAR VFE ++V WN+MI YV++ +
Sbjct: 431 DRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYD 490
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAA-------NGLFDLMPFR-DVVSWNCMI 292
A F + + I +S + ++V A L F D+ N ++
Sbjct: 491 NAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALV 550
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+ G++ SA N F+ M R++VSWN ++A +V+ + F M KP++
Sbjct: 551 SMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQI 610
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +L ACA+ + G+ +H+ I + + DV++ T L++MY KCG +D A VF N+
Sbjct: 611 TFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNL 670
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+KNV SW SMI GY HG+G++ALE+F +M++ G P+ TF+ LSAC HAG++ EG
Sbjct: 671 PKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGL 730
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+F+ M+ + IEP++EHYGCMVDL GRAGL+ ++ E ++K+ ++ LWGALL AC
Sbjct: 731 HHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQV 789
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H + EL + VAQ +EL+P D G YV+LSNIYA+ G W EV +R++M ++ + K G S
Sbjct: 790 HLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQS 849
Query: 593 LV 594
+
Sbjct: 850 WI 851
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 249/563 (44%), Gaps = 79/563 (14%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH + S + D F + +L + + + + FD + + D + N ++ ++
Sbjct: 125 RIHNHIKFSKIQPDIFMWN-MLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQH 183
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
A + E+M+ V+ + YTF + CA +++ +G ++ + I+ G++ DLFV
Sbjct: 184 RRYEEAFRLH-EQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
+LI+M+ CG V DA KVF + P DL+TW SMI G ++R+ A LF M E
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302
Query: 253 -------------------------------------DIFTWNSMISGYVDVGDMEAANG 275
+I+ +++S Y G ME A
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+F+L+ R+VVSW MI G+A+ G + E
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRME-------------------------------EA 391
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
F++MI +PN + MS+L AC+ + G+ IH I K D + T+LL+M
Sbjct: 392 FLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSM 451
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAKCG + ARNVF+ ++++NVV+WN+MI Y H + + A+ F + K G P+ +TF
Sbjct: 452 YAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTF 511
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+L+ C + G W L+ R E + +V + G + + L + +P
Sbjct: 512 TSILNVCKSPDALELGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP 570
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLME--LEPRDPGPYVLLSNIYASEGKWDEV 573
E W +++ H ++ + + E ++P D + L N AS E
Sbjct: 571 -ERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKP-DQITFTGLLNACASPEALTEG 628
Query: 574 ENLRRIMKEKEL--EKAVGSSLV 594
L ++ E L + VG+ L+
Sbjct: 629 RRLHALITEAALDCDVVVGTGLI 651
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 245/485 (50%), Gaps = 21/485 (4%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
++ + T+ L ++C ++L +G+++H I + D+F+ N LI MY+ CG A+
Sbjct: 100 IQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAK 159
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVG 268
++F++ P D+ +WN ++ GYV++R A L + M + D +T+ M++ D
Sbjct: 160 QIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAK 219
Query: 269 DMEAANGLFDLMPF----RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+++ LF L+ D+ +I+ + K G V A F+ + R++++W ++
Sbjct: 220 NVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMIT 279
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
R + + + LF M +P++ + +S+L AC + ++ G+ +H+ +++ +
Sbjct: 280 GLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDT 339
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
++ + T+LL+MY KCG M+ A VF+ + +NVVSW +MI G+ HG+ E+A F +M
Sbjct: 340 EIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMI 399
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFD-LMQRIYKIEPKVEHYGCMVDLLGRAGL 503
+ G PN TF+ +L AC+ + +G D +++ Y + +V ++ + + G
Sbjct: 400 ESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR--TALLSMYAKCGS 457
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME--LEPRDPGPYVLLS 561
+ D+ + ++ + A W A+++A H + Q L++ ++P D + +
Sbjct: 458 LMDARNVFERISKQNVVA-WNAMITAYVQHEKYDNAVATFQALLKEGIKP-DSSTFTSIL 515
Query: 562 NIYASE-----GKWDEVENLRR-IMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
N+ S GKW + +R + + A+ S V+ G+ S + N P R +
Sbjct: 516 NVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLV 575
Query: 616 VYSML 620
++ +
Sbjct: 576 SWNTI 580
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 320/621 (51%), Gaps = 73/621 (11%)
Query: 49 QRLPIVDLS-HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS 107
Q+ P+ L +LQ + + K+ Q+H ++ + +++ + L +S
Sbjct: 53 QQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMS 112
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
+ + FDGI ++F+ N +++ + P +L Y E M+ +++T+P + K C
Sbjct: 113 QAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYRE-MLCFGQRADNFTYPFVLKAC 171
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
+ + G++VH+ +V CG E D++V NSL+ MY+ G++
Sbjct: 172 GDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDM------------------- 212
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----FR 283
G AR +FD M ERD+ +WN+MISGY D A +FDLM F
Sbjct: 213 ------------GTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFA 260
Query: 284 D---------------VVSWNCMIDGYA---KIGN------------------VTSARNC 307
D V +I GYA IGN + AR
Sbjct: 261 DCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRL 320
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+R+ ++ VSWN ++ Y R D E LRLF RM + P++ + ++VL AC + +
Sbjct: 321 FERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAAL 380
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G IHSY+ K + ++ T+L+ MY+KCG + +R VFD M +K++VSW++M+ GY
Sbjct: 381 RYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGY 440
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
G+HG+G +A+ + M+ P++ F +LSAC+HAG+V+EG F M++ Y ++P
Sbjct: 441 GLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPA 500
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+ HY CMVDLLGRAG + ++ ++ + ++ +W ALL+A H N +L +I AQ +
Sbjct: 501 LSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVF 560
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
++ P+ Y+ LSNIYA+E +WD+VE +R +++ K L+K+ G S + +V +
Sbjct: 561 DMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGD 620
Query: 608 CPPHRKCIVYSMLGEIGAQMK 628
+ +Y+ L E+ Q+K
Sbjct: 621 KSHQQTEDIYAKLNELKQQLK 641
>gi|356498888|ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 552
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 310/540 (57%), Gaps = 11/540 (2%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQD-----SFAASRVLKKL--CTS-LSSVSLS 109
H ++Q L + T+ Q H L + L Q + R+L ++ CT +++ +
Sbjct: 5 HYLMQLLNAAKTIDHLKQTHA-LFLKLLRQQPPHHYHYFMGRLLHQVLRCTGEKTNLCYA 63
Query: 110 VLFFDGIQE-PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
FD + P +F+ +++++ L Y +M V + +TF + C
Sbjct: 64 HQLFDTMPNCPSSFLWTSLIRALLSHQAHLHHCISTYSRMHQNGVLPSGFTFSSILSACG 123
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ +L EGK+VHAR+++ GF + V+ +L+ MY+ G + DAR VF+ D+V W +
Sbjct: 124 RVPALFEGKQVHARVMQSGFHGNKIVQTALLDMYAKSGCISDARAVFDGMDDRDVVAWTA 183
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
M+ GY K + A+ LFD M ER+ FTW +M++GY + DM+ A L+D+M ++ V+W
Sbjct: 184 MVCGYAKVGMMVDAQWLFDKMGERNSFTWTAMVAGYANCEDMKTAKKLYDVMNDKNEVTW 243
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCM-RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
MI GY K+GNV AR FD + + + + +LA Y + E + ++++M
Sbjct: 244 VAMIAGYGKLGNVREARRVFDGIPVPQGASACAAMLACYAQHGYAKEAIDMYEKMREAKI 303
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
K E +++ ++ACA + I + + ++++ ++ST+L+ M++KCG ++LA +
Sbjct: 304 KITEVAMVGAISACAQLRDIRMSNTLTGHLEEGCCDRTHIVSTALIHMHSKCGNINLALS 363
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
F M ++V ++++MI + HG+ + A+++F++M+K G PN TFI VL+AC +G
Sbjct: 364 EFTTMRYRDVYTYSAMIAAFAEHGKSQDAIDLFLKMQKEGLKPNQVTFIGVLNACGSSGY 423
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ EG +F +M ++ IEP EHY C+VDLLG+AG + + +L+ + A WG+LL
Sbjct: 424 IEEGCRFFQIMTGVFGIEPLPEHYTCIVDLLGKAGQLERAYDLIKQNASSADATTWGSLL 483
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+ C + N ELG+I A+HL E++P D G YVLL+N YAS+ KW+ + +++++ EK ++K
Sbjct: 484 ATCRLYGNVELGEIAARHLFEIDPEDSGNYVLLANTYASKDKWEHAQEVKKLISEKGMKK 543
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 321/608 (52%), Gaps = 54/608 (8%)
Query: 53 IVDLSHPILQKLESCST-VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
++DL H CS + + QI +++ LS R+L S + +
Sbjct: 5 LIDLLH--------CSLPINQLKQIQALIIIKYLSLTPLFIRRLLNA-----SFIQYARQ 51
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I PD + + + ++ L+ AL + M V +T P + K CA +
Sbjct: 52 VFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFV-SMHQNNVRIVCFTIPPIFKSCASLL 110
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++ GK+VH+ +++ GF +F +N+LI+ Y+ ++ A +F+ V D + +N +I
Sbjct: 111 AIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLIS 170
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF-------------- 277
Y ++ EV ARELFD M +R I +WN+MIS Y GD +F
Sbjct: 171 AYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEIT 230
Query: 278 ------------DL-MPFR------------DVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
DL M R +++ M++ Y K G V R FD M
Sbjct: 231 LATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMA 290
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
R+VV+W+ ++A Y + E L LF+ M KPN+ +L+SVL+ACA +G ++ G+
Sbjct: 291 RRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGER 350
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
I SY++ + +V ++++LL MY+KCG + AR +FD + +++ V+WNSMIMG ++G
Sbjct: 351 IGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGF 410
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
E A+ ++ M++ PN+ TF+ +++ACTHAG V G +F M+ + I P +EH+
Sbjct: 411 AEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFA 470
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VDL R+G + D+ E + ++ +E +WG LLSA H N EL ++ + L+ELEP
Sbjct: 471 CIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPD 530
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+ G YV+LSNIYAS G+W E +R++MK+K ++KA S V + + +V + R
Sbjct: 531 NSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPR 590
Query: 613 KCIVYSML 620
VYS +
Sbjct: 591 SDEVYSTI 598
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 264/434 (60%), Gaps = 15/434 (3%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D+ V ++I Y G + +AR++F++ V ++ TW +M+ GY KN V AR+LF+
Sbjct: 173 EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEV 232
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+ +W +M+ GY G M+ A LF+ MP + +V+ N MI + G + AR F
Sbjct: 233 MPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMF 292
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ M R+ +WN ++ ++ R E L LF RM R N S++SVL+ CA++ +D
Sbjct: 293 EGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLD 352
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ +H+ + + D+ +++ L+TMY KCG + A+ +F+ K+VV WNSMI GY
Sbjct: 353 HGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYS 412
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG GE+AL +F +M G P++ TFI VLSAC+++G V EG+ F+ M+ Y++EP +
Sbjct: 413 QHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGI 472
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHY CMVDLLGRAG + ++ ELV K+PME +WGALL AC H +L ++ + L +
Sbjct: 473 EHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAK 532
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK----------ELEKAV-----GSSL 593
LEP++ GPYVLLS++YA++G+W +VE LR+ + + E+EK V G S
Sbjct: 533 LEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIKFPGCSWIEVEKKVHMFTGGDSK 592
Query: 594 VHPGEFASESIVEN 607
HP + ++E
Sbjct: 593 SHPEQHMITQMLEK 606
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 187/363 (51%), Gaps = 28/363 (7%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPV--WDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
S I Y G++ +ARKVF++ P+ + +WN+M+ Y ++ + A LFD MP+R+
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
++N MISGYV G + A +FD+MP R+VVSW M+ GY + G V A F M
Sbjct: 83 TVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPR 142
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RNVVSW +++ ++ + +LFD + D + +++ +G +D + +
Sbjct: 143 RNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDV----VVVTNMIGGYCQVGRLDEAREL 198
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+ K R +V T++++ YAK G +D+AR +F+ M E+N VSW +M+MGY G+
Sbjct: 199 FDEM-KVR---NVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRM 254
Query: 434 EKALEMFMEMEKRGPTP-NDATFICVLSACTH-AGMVLEGWWYFDLMQRIYKIEPKVEHY 491
++A E+F M + N+ L+ H A M+ EG E +
Sbjct: 255 KEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEG-----------MKERDEGTW 303
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPAL----WGALLSACSTHSNSELGKIVAQHLM 547
M+ + R GL ++ L +++ E G AL ++LS C++ ++ + G+ V L+
Sbjct: 304 NAMIKVFERKGLDLEALGLFARMQRE-GVALNFPSMISVLSVCASLASLDHGRQVHARLV 362
Query: 548 ELE 550
E
Sbjct: 363 RSE 365
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 45/260 (17%)
Query: 252 RDIFTWNSMISGYVDVGDMEAANG---------------------------------LFD 278
R + + S IS Y +GD+ A LFD
Sbjct: 17 RSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFD 76
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
MP R+ VS+N MI GY K G V AR FD M RNVVSW ++ YV+ E +L
Sbjct: 77 QMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKL 136
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F M R N S ++ ID + + I + DV++ T+++ Y +
Sbjct: 137 FWEMPR----RNVVSWTVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQ 188
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G +D AR +FD M +NV +W +M+ GY +G+ + A ++F M P N+ ++ +
Sbjct: 189 VGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM----PERNEVSWTAM 244
Query: 459 LSACTHAGMVLEGWWYFDLM 478
L T +G + E + F+ M
Sbjct: 245 LMGYTQSGRMKEAFELFEAM 264
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ F+G++E D N ++K F AL + +M + V N + + VCA +
Sbjct: 290 MMFEGMKERDEGTWNAMIKVFERKGLDLEALGLF-ARMQREGVALNFPSMISVLSVCASL 348
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SL G++VHAR+V+ F+ DL+V + LI MY CG+++ A+ +F D+V WNSMI
Sbjct: 349 ASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMI 408
Query: 231 DGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
GY ++ A +F M + D T+ ++S G ++ +F+ M V
Sbjct: 409 TGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQV 468
Query: 287 S-----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ CM+D + G V A ++M M + + W LL
Sbjct: 469 EPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLG 512
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 299/539 (55%), Gaps = 20/539 (3%)
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+L+ LF + + D F N+++ D AL + M + +FP K
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALR-AFSSMRKLSLYPTRSSFPCAIKA 85
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + + GK+ H + G++ D+FV ++LI MYS CG++ DARKVF++ P ++V+W
Sbjct: 86 CSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 227 NSMIDGYVKNREVGFARELF-DFMPERD-----IFTWNSMISGYVDVGDMEAANGLFD-L 279
SMI GY N A LF D + E + +F + + + AA GL + +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESI 205
Query: 280 MPF-------RDVVSWNCMIDGYAK--IGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
F R V N ++D YAK G V AR FD++ ++ VS+N ++++Y +
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 331 DYCECLRLFDRMIRGDAKP-NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
E +F R+I+ N +L +VL A ++ G + IG+ IH + + ++ DV++
Sbjct: 266 MSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
TS++ MY KCG ++ AR FD M KNV SW +MI GYGMHG KALE+F M G
Sbjct: 326 TSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
PN TF+ VL+AC+HAG+ GW +F+ M+ + +EP +EHYGCMVDLLGRAG ++ + +
Sbjct: 386 PNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 510 LVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGK 569
L+ K+ ME +W +LL+AC H N EL +I L EL+P + G Y+LLS+IYA G+
Sbjct: 446 LIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGR 505
Query: 570 WDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
W +VE +R MK + L K G SL+ GE I + P R+ I Y L E+ ++
Sbjct: 506 WKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKI-YEFLAELNRKL 563
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V+++ FD I + D N+IM + A + + K V N T +
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLL 295
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
+ +LR GK +H ++++ G E D+ V S+I MY CG V AR F+ ++ +
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRS 355
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMI-----SGYVDVG--DMEAAN 274
W +MI GY + A ELF M + + T+ S++ +G DVG A
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMK 415
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
G F + P + + CM+D + G + A + +M M + + W+ LLA
Sbjct: 416 GRFGVEP--GLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLA 464
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 310/594 (52%), Gaps = 66/594 (11%)
Query: 15 LSLDKFIKSQ-KNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEF 73
L KF K Q + + + PKL ++ P+ T + Q L++ ++
Sbjct: 11 LHFPKFRKFQSRKVSSSLPKLELDQKSPQET------------VFLLGQVLDTYPDIRTL 58
Query: 74 HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H+++++ L +S ++++ SL V+ + FD I E + + N +++S++
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYA-SLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
N +G + M V +HYTFP + K C+ ++ G+K+H K G LF
Sbjct: 118 -NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V N L+ MY CG + +AR V D M RD
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVL-------------------------------DEMSRRD 205
Query: 254 IFTWNSMISGYVDVGDMEAANGLFD--LMPFRDVVSWNCMIDG-----------YAKIGN 300
+ +WNS++ GY A N FD L R++ S D N
Sbjct: 206 VVSWNSLVVGY-------AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
V ++ F +M +++VSWN+++ +Y++ E + L+ RM +P+ S+ SVL A
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
C + + +G+ IH YI++ ++ P++LL +L+ MYAKCG ++ AR+VF+NM ++VVSW
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
+MI YG G+G A+ +F +++ G P+ F+ L+AC+HAG++ EG F LM
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
YKI P++EH CMVDLLGRAG ++++ + + ME +WGALL AC HS++++G
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A L +L P G YVLLSNIYA G+W+EV N+R IMK K L+K G+S V
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 272/488 (55%), Gaps = 38/488 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I +PD +CN +++ P +S Y E M + V + YTF + K C+ +
Sbjct: 34 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTE-MEKRGVSPDRYTFTFVLKACSKLE 92
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
G H ++V+ GF L+ +V+N+LI ++ CG++
Sbjct: 93 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDL----------------------- 129
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
G A ELFD + W+SM SGY G ++ A LFD MP++D V+WN M
Sbjct: 130 --------GIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVM 181
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I G K + SAR FDR ++VV+WN +++ YV C E L +F M P+
Sbjct: 182 ITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDV 241
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVLLST----SLLTMYAKCGVMDLAR 406
+++S+L+ACA +G ++ G+ +H YI + + + + T +L+ MYAKCG +D A
Sbjct: 242 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 301
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
VF + ++++ +WN++I+G +H E ++EMF EM++ PN+ TFI V+ AC+H+G
Sbjct: 302 EVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSG 360
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
V EG YF LM+ +Y IEP ++HYGCMVD+LGRAG + ++ V + +E +W L
Sbjct: 361 RVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 420
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
L AC + N ELGK + L+ + + G YVLLSNIYAS G+WD V+ +R++ + ++
Sbjct: 421 LGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVK 480
Query: 587 KAVGSSLV 594
K G SL+
Sbjct: 481 KPTGVSLI 488
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 132/320 (41%), Gaps = 42/320 (13%)
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A FD + +V N +L + + + L+ M + P+ + VL
Sbjct: 26 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 85
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
AC+ + G H + + + + +L+ +A CG + +A +FD+ + + V
Sbjct: 86 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 145
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+W+SM GY G+ ++A+ +F EM P + + +++ C + FD
Sbjct: 146 AWSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCLKCKEMDSARELFDRF 201
Query: 479 QRIYKIEPKVEHYGCMV----------DLLGRAGLMRDSEE---LVSKLPMEAGPALWGA 525
E V + M+ + LG MRD+ E +V+ L +
Sbjct: 202 T-----EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL----------S 246
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYV------LLSNIYASEGKWDEVENLRRI 579
LLSAC+ + E GK + +++E YV L ++YA G D + R
Sbjct: 247 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 306
Query: 580 MKEKELEK----AVGSSLVH 595
+K+++L VG +L H
Sbjct: 307 VKDRDLSTWNTLIVGLALHH 326
>gi|357446587|ref|XP_003593569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482617|gb|AES63820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 528
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/475 (37%), Positives = 273/475 (57%), Gaps = 17/475 (3%)
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+M++ HNHYTF K C + +G ++HAR++K G D F++N+L++ Y
Sbjct: 47 NQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSS 106
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMI 261
+V+ A +VF+ P D+V+W S+I G K GF E + ++ T S I
Sbjct: 107 NDVVSATRVFKSIPSPDVVSWTSLISGLSK---CGFETEAIEAFSSINVKPNALTLVSAI 163
Query: 262 S-----GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
S G + G A GL LM ++V +N +D YAK G ++ARN F +M R+V
Sbjct: 164 SACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDV 223
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+SW LL Y R E + +F +MI G+A+PNE+++++VL+ACA++G + +G W+H
Sbjct: 224 ISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHD 283
Query: 376 YIQKCRIKPDV--LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
YI+K RI DV + +L+ MY KCG M + VF+ + K+V+SW ++I G M+G G
Sbjct: 284 YIEK-RIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYG 342
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
++ ++MF M G P+D TFI +LSAC+H G+V EG +F M+ Y I P++ HYGC
Sbjct: 343 KQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGC 402
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVD+ GRA L ++ + +P+EA +W ALL AC TH N E+ + + + + +
Sbjct: 403 MVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQIHD-KNVG 461
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
G LLSNIYAS +WD+ N+R+IM+ L+K G S V P S+ C
Sbjct: 462 VGTLALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVEPEVRLDSSLCAKC 516
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 162/373 (43%), Gaps = 18/373 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH +L+ SG D F + +L +S VS + + F I PD +++
Sbjct: 79 EIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRV-FKSIPSPDVVSWTSLISGL--- 134
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC-GFELDLF 193
G + E + V+ N T C+ I +++ GK +HA +K + ++
Sbjct: 135 -SKCGFETEAIEAFSSINVKPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIV 193
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM---- 249
N+ + +Y+ CG +AR VF D+++W +++ Y + + G A E+F M
Sbjct: 194 FYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSG 253
Query: 250 -PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTS 303
E + T +++S +G + + D + R D N +++ Y K G++
Sbjct: 254 EAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKM 313
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
F+ + ++V+SW ++ + +++F M+ P++ + + +L+AC++
Sbjct: 314 GLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSH 373
Query: 364 MGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWN 421
+G++ G ++ I P + ++ MY + + + A M E W+
Sbjct: 374 VGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWS 433
Query: 422 SMIMGYGMHGQGE 434
+++ HG E
Sbjct: 434 ALLQACKTHGNEE 446
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 239/378 (63%), Gaps = 1/378 (0%)
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-RDIFTWNSMISGYVDVGDMEAANGL 276
G D+ ++ + Y + +V A LF + + D+ TW +M++G+ + GD+E A
Sbjct: 102 GHARDVYVLSAAVSAYFRATDVASAERLFSYTKDVADVVTWTTMVTGHANTGDLERARWF 161
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
FD MP R+VVSWN M+ YA G ++ AR FD M RN SW+ ++ VR E L
Sbjct: 162 FDAMPERNVVSWNAMLGAYASAGMLSKARKLFDIMPSRNAASWSSMVTGLVRSNRCEEAL 221
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
R+F MI PNE++L+S ++AC+ + ++ G W+H+Y ++ ++L+T+++ MY
Sbjct: 222 RVFSEMIGMGVVPNESALVSAVSACSLLRSLEHGVWVHAYAKRELQGMSLVLATAIVDMY 281
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
KCG + A VF M KN+ SWNSMI G M+G+ +AL +F +M+ G PND TFI
Sbjct: 282 GKCGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVRPNDITFI 341
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+L AC+H+G+V EG W F++M + I+P EHYG MVDLLGRAG +R++ + V+ +P+
Sbjct: 342 GLLGACSHSGLVDEGRWLFNMMVNGFGIQPVQEHYGLMVDLLGRAGHVREAVDFVNSMPV 401
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
E P LWGAL AC H ELG+ +A+ L+ELEPR Y+LLSNIY + +WD++ +
Sbjct: 402 EPHPGLWGALAGACKIHGEVELGEEIAKKLIELEPRHGSRYILLSNIYGASNRWDDMATV 461
Query: 577 RRIMKEKELEKAVGSSLV 594
RR++K++++ K G+++V
Sbjct: 462 RRLLKDRKVPKGTGNAMV 479
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 133/300 (44%), Gaps = 44/300 (14%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ +++ ++ G++ AR F+ P ++V+WN+M+ Y + AR+LFD MP
Sbjct: 138 DVVTWTTMVTGHANTGDLERARWFFDAMPERNVVSWNAMLGAYASAGMLSKARKLFDIMP 197
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS----------------------W 288
R+ +W+SM++G V E A +F M VV W
Sbjct: 198 SRNAASWSSMVTGLVRSNRCEEALRVFSEMIGMGVVPNESALVSAVSACSLLRSLEHGVW 257
Query: 289 -----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
++D Y K G + +A F M ++N+ SWN ++
Sbjct: 258 VHAYAKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGR 317
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS-YIQKCRIKPDVLLST 390
+ L LF +M +PN+ + + +L AC++ G++D G+W+ + + I+P
Sbjct: 318 EMQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMMVNGFGIQPVQEHYG 377
Query: 391 SLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKR 446
++ + + G + A + ++M E + W ++ +HG+ GE+ + +E+E R
Sbjct: 378 LMVDLLGRAGHVREAVDFVNSMPVEPHPGLWGALAGACKIHGEVELGEEIAKKLIELEPR 437
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + +A ++++ + N AL + E M+ V N C+ +R
Sbjct: 192 LFDIMPSRNAASWSSMVTGLVRSNRCEEALRVFSE-MIGMGVVPNESALVSAVSACSLLR 250
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SL G VHA + + L + +++ MY CG + +A +VF PV ++ +WNSMI
Sbjct: 251 SLEHGVWVHAYAKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMIT 310
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM------- 280
G N A LF M + T+ ++ G ++ LF++M
Sbjct: 311 GLAMNGREMQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMMVNGFGIQ 370
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
P ++ + M+D + G+V A + + M
Sbjct: 371 PVQE--HYGLMVDLLGRAGHVREAVDFVNSM 399
>gi|414879404|tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 263/482 (54%), Gaps = 40/482 (8%)
Query: 155 HNHYTFPLLGKVCAGIR--SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
H+ P+L K A L GK +HA +K F DL V +++ MY CG + DAR
Sbjct: 52 HHQPLLPVLLKAAAASSPAELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADAR 111
Query: 213 KVFEDGP-------------------------------VWDLVTWNSMIDGYVKNREVGF 241
+ F++ P W VTW ++I G+ + ++
Sbjct: 112 RAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMAE 171
Query: 242 ARELFDFMPE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR F+ P R + TW ++ GYV GDME A +FD MP R+ W+ M+ GY K G
Sbjct: 172 ARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAG 231
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR FDR+ RN+V+WN L+A Y + + L F M++ KP+E ++ S+L+
Sbjct: 232 DAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMASLLS 291
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G ++ G+ +H +I + I+ + + L+ MYAKCG + AR +FD+M KN
Sbjct: 292 ACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNEC 351
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI HGQ ++AL +F +ME+ G PN T + VL ACTH G V EG F+ +
Sbjct: 352 WNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIFNKLD 411
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y +E VEHYGC+VDLLGRAG ++++ E+V+ + E +WG+LL AC H ++E+
Sbjct: 412 -AYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVHRDAEMS 470
Query: 540 KIVAQHLMELE----PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
++V + ++ L + Y++L+NI A+ +W++ E +RR M + +EK G S +
Sbjct: 471 RLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKTPGCSSLE 530
Query: 596 PG 597
G
Sbjct: 531 LG 532
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 14/223 (6%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD I + N ++ + + AL ++ M+ + V+ + +T L CA + S
Sbjct: 240 FDRIPTRNLVNWNALIAGYAQIGCSEQALEAFH-LMLQERVKPDEFTMASLLSACAQLGS 298
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L +GKKVH I + + FV N LI MY+ CG++ AR +F+ + WN+MI
Sbjct: 299 LEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTMISA 358
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMI----------SGYVDVGDMEAANGLFDLMPF 282
+ + A LF F ER N++ G+VD G ++ N L
Sbjct: 359 LASHGQSDEALHLF-FQMERSGRKPNTITVLAVLGACTHGGFVDEG-LQIFNKLDAYGVE 416
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + C++D + G + A + M N V W LL
Sbjct: 417 AGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLG 459
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 311/594 (52%), Gaps = 66/594 (11%)
Query: 15 LSLDKFIKSQ-KNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEF 73
L KF K Q + + + PKL ++ P+ T + Q L++ ++
Sbjct: 11 LHFPKFRKFQSRKVSSSLPKLELDQKSPQET------------VFLLGQVLDTYPDIRTL 58
Query: 74 HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H+++++ L +S ++++ SL V+ + FD I E + + N +++S++
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAY-ASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
N +G + M V +HYTFP + K C+ ++ G+K+H K G LF
Sbjct: 118 -NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V N L+ MY CG + +AR V ++ M RD
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDE-------------------------------MSRRD 205
Query: 254 IFTWNSMISGYVDVGDMEAANGLFD--LMPFRDVVSWNCMIDG-----------YAKIGN 300
+ +WNS++ GY A N FD L R++ S D N
Sbjct: 206 VVSWNSLVVGY-------AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
V ++ F +M +++VSWN+++ +Y++ E + L+ RM +P+ S+ SVL A
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
C + + +G+ IH YI++ ++ P++LL +L+ MYAKCG ++ AR+VF+NM ++VVSW
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
+MI YG G+G A+ +F +++ G P+ F+ L+AC+HAG++ EG F LM
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
YKI P++EH CMVDLLGRAG ++++ + + ME +WGALL AC HS++++G
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A L +L P G YVLLSNIYA G+W+EV N+R IMK K L+K G+S V
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 315/599 (52%), Gaps = 53/599 (8%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P P+ + ++ +V L+ C++ ++ Q+H + ++ G ++ SF A+++++
Sbjct: 3 PPPRLSARADEENRLVGLA-------ARCASARQLEQLHARAVLLGHARSSFVAAKLVRA 55
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMA-KFVEHNH 157
+ + A ++ S D A++ Y + V
Sbjct: 56 FA--------DLGHLRAARAVAAVRAHSQSGSSAAARD---AVALYAQMHRGCPGVRPLT 104
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
+T + K A LREG++VH + K GF+ D + +L+ +Y+ CG + DAR+VF+
Sbjct: 105 FTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIATTLVDLYARCGRLDDARRVFDR 164
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM------- 270
V D +N+MI Y++ EV A ELF+ MPER+ T M+ GY GDM
Sbjct: 165 LLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTHTLMEMVGGYSARGDMDSAKHVF 224
Query: 271 EAANGL-------------------------FDLMPFRDVVSWNCMIDG-YAKIGNVTSA 304
E ANG+ FD M RDV +WN MI YAK G V A
Sbjct: 225 EMANGVVNMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDA 284
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
R FD M RNVV W +++ Y + + + ++LF M K ++A++ +V+++C M
Sbjct: 285 RKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQM 344
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G +D+G+++H+Y + + + SL+ MY+KCG + A +F + +++ SW MI
Sbjct: 345 GALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMI 404
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
MG+ ++G +AL++F +ME+ G PN+ TF+ VL++C+H G+V +G+ +F M ++Y
Sbjct: 405 MGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYG 464
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
I P++EHYGCMVDLLGRA L+ ++E+ + ++P+ A+W +LL AC L + VA
Sbjct: 465 IAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVA 524
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASE 602
+ + ELEP G VLLSN+YA+ +W +V +R M + K G S++ A E
Sbjct: 525 ERVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPGCSVIEVNGCAHE 583
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 226/340 (66%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D S++ Y + A +F M RDVV+WN MI GY K G++ AR FD M
Sbjct: 113 DTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYVKAGDLAHARELFDAMP 172
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RNVVSW ++ Y + + E + +F RM +P+ +L+SVL+AC ++G +D+G+W
Sbjct: 173 ERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEW 232
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H ++ + ++ ++ L S++ MY KCG ++ A VF+ M EK+VV+W ++I G+ +HG
Sbjct: 233 VHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGL 292
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G +A+EMF ME+ PND TF+ +LSAC+H G+ G WYF++M Y+I+P+VEHYG
Sbjct: 293 GLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYG 352
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVDLLGRAG ++++++LV +P++A A+WGALL+A TH +++LG+ HL+ELEP
Sbjct: 353 CMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLIELEPS 412
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+ G Y+LLSNI+A + +WD+V LR+ MKE+ L G+S
Sbjct: 413 NSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGAS 452
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 154/314 (49%), Gaps = 45/314 (14%)
Query: 176 GKKVHARIVKCG-FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G ++H+ +++ G D V SL+ +Y C V DAR VF + V D+V WN MI GYV
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYV 156
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----------- 283
K ++ ARELFD MPER++ +W ++I GY + E A +F M
Sbjct: 157 KAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLS 216
Query: 284 -----------DVVSW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
D+ W N +ID Y K G + A F+ M ++
Sbjct: 217 VLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKS 276
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW-IH 374
VV+W L+A + + + +F RM R + PN+ + +++L+AC+++G+ D+G+W +
Sbjct: 277 VVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFN 336
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ- 432
+ + RIKP V ++ + + G + A+++ +M K N W +++ HG
Sbjct: 337 IMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDA 396
Query: 433 --GEKALEMFMEME 444
GE+AL +E+E
Sbjct: 397 DLGEEALVHLIELE 410
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E + T++ + + P A+ + +M + +E + + C +
Sbjct: 167 LFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVF-RRMQVEGIEPDGVALLSVLSACGDLG 225
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++ G+ VH +V+ G ++ + NS+I MY CG + A +VFE +VTW ++I
Sbjct: 226 AVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIA 285
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM--PFR-- 283
G+ + A E+F M ++ T+ +++S VG + F++M +R
Sbjct: 286 GFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIK 345
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + CM+D + G + A++ M ++ N W LLA
Sbjct: 346 PQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLA 388
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 34/197 (17%)
Query: 369 IGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+G +HS + + + D +S SL+ +Y C + AR+VF M ++VV+WN MI GY
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGY 155
Query: 428 GMHG-------------------------------QGEKALEMFMEMEKRGPTPNDATFI 456
G + E+A+E+F M+ G P+ +
Sbjct: 156 VKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALL 215
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSAC G V G W + R + ++ ++D+ + G + + E+ +
Sbjct: 216 SVLSACGDLGAVDLGEWVHRFVVR-RGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGME- 273
Query: 517 EAGPALWGALLSACSTH 533
E W L++ + H
Sbjct: 274 EKSVVTWTTLIAGFALH 290
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 155/362 (42%), Positives = 232/362 (64%), Gaps = 4/362 (1%)
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+F F + + NS++ YV ++ A+ +F+ M RD VSWN +I G+ ++G +
Sbjct: 142 HVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRR 201
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR F+ M + + SW +++ Y R Y + L F RM +P+E SL+SVL ACA
Sbjct: 202 ARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQ 261
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G +++G+WIH Y K ++ + +L+ MYAKCG +D R +FD M E++V+SW++M
Sbjct: 262 LGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTM 321
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I+G HG+ +A+E+F EM+K PN TF+ +LSAC HAG++ EG YF+ M+R Y
Sbjct: 322 IVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYN 381
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
IEP VEHYGC+V+LLG +G + + EL+ K+PM+ A+WG+LLS+C +HSN E+ I
Sbjct: 382 IEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAM 441
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG----EF 599
+HL+ELEP D G YVLLSN+YA GKWD V +R++M+ K ++K G S + EF
Sbjct: 442 EHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEF 501
Query: 600 AS 601
AS
Sbjct: 502 AS 503
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 207/438 (47%), Gaps = 52/438 (11%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
D+ PIL+ +C + E +IH ++ LSQ SF ++++ +C + + L F
Sbjct: 15 DIFVPILK---NCPNIVELKKIHAHIVKFSLSQSSFLVTKMVD-VCNHHAETEYANLLFK 70
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH----NHYTFPLLGKVCAGI 170
+ +P+AF+ N +++++ A++ Y + + E+ + +TFP + K CAG+
Sbjct: 71 RVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGL 130
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
GK+VH + K G + + V NSL+ MY C + DA KVFE+ D V+WN++I
Sbjct: 131 MCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLI 190
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP--------- 281
G+V+ ++ AR +F+ M ++ IF+W +++SGY +G A F M
Sbjct: 191 SGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEI 250
Query: 282 ------------------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R++ N +I+ YAK G++ R FD+M
Sbjct: 251 SLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQM 310
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
R+V+SW+ ++ E + LF M + +PN + + +L+ACA+ G+++ G
Sbjct: 311 NERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGL 370
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGM 429
++ S + I+P V L+ + G +D A + M K + W S++
Sbjct: 371 RYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRS 430
Query: 430 HGQGE---KALEMFMEME 444
H E A+E +E+E
Sbjct: 431 HSNLEIAVIAMEHLLELE 448
>gi|226496045|ref|NP_001146017.1| uncharacterized protein LOC100279548 [Zea mays]
gi|219885333|gb|ACL53041.1| unknown [Zea mays]
gi|414872421|tpg|DAA50978.1| TPA: hypothetical protein ZEAMMB73_118572 [Zea mays]
Length = 528
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 251/393 (63%), Gaps = 2/393 (0%)
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G++ AR +FE P D+V+WNSM+ G K + A E+FD MPE ++ +WN+++SG+
Sbjct: 134 AGDIPAARAMFEAMPARDVVSWNSMVAGLAKAGHLDEAIEMFDQMPETNVASWNALVSGF 193
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ G + A LF+ MP R+ VSW MI GYAK G+V +A N FDRM +++ +WN +++
Sbjct: 194 MAQGHLAQAQELFERMPTRNNVSWITMISGYAKAGDVQAAANLFDRMGSKDLYAWNAMIS 253
Query: 325 LYVRCKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
Y + E L +F+RM++ PNE + SV++AC+ +G + G W+ +++ +
Sbjct: 254 CYAQNGCAREALGIFNRMLKPHIWVVPNEKTFSSVISACSQLGDLRFGLWVENFMGYVGV 313
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
D L T+L+ +Y K G MD A ++F + ++VVS+++MI+G GMHG+ +A+ +F E
Sbjct: 314 DLDDHLRTALVDLYTKSGRMDRAFDLFRGLRSRDVVSYSAMIVGCGMHGKLNEAVGLFKE 373
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M K PN TF+ +LSA +HAG++ E F M Y+I P +EHY MVD+LGR G
Sbjct: 374 MSKARIDPNAVTFVGLLSAYSHAGLLEEARACFTSMTSRYRINPSMEHYTIMVDILGRCG 433
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSN 562
+ ++ +LV ++P+ ++WGALL AC H+N ELG++VA ELEP++ G Y+LL N
Sbjct: 434 KLEEAFQLVMQIPVCPDASVWGALLLACRLHNNIELGEVVASKCFELEPQESGYYILLGN 493
Query: 563 IYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
IYA KWD+V+ LR++M E+ L K GSS VH
Sbjct: 494 IYAQAKKWDKVKGLRKMMAERGLSKTPGSSWVH 526
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 40/222 (18%)
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF----------------- 440
+ G + AR +F+ M ++VVSWNSM+ G G ++A+EMF
Sbjct: 133 RAGDIPAARAMFEAMPARDVVSWNSMVAGLAKAGHLDEAIEMFDQMPETNVASWNALVSG 192
Query: 441 ----------MEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM--QRIYKIEPKV 488
E+ +R PT N+ ++I ++S AG V FD M + +Y +
Sbjct: 193 FMAQGHLAQAQELFERMPTRNNVSWITMISGYAKAGDVQAAANLFDRMGSKDLYAWNAMI 252
Query: 489 EHY---GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
Y GC + LG M V +P E + +++SACS + G V ++
Sbjct: 253 SCYAQNGCAREALGIFNRMLKPHIWV--VPNE---KTFSSVISACSQLGDLRFGLWV-EN 306
Query: 546 LMELEPRDPGPYV--LLSNIYASEGKWDEVENLRRIMKEKEL 585
M D ++ L ++Y G+ D +L R ++ +++
Sbjct: 307 FMGYVGVDLDDHLRTALVDLYTKSGRMDRAFDLFRGLRSRDV 348
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAK-FVEHNHYTFPLLG 164
V + FD + D + N ++ + AL + + +V N TF +
Sbjct: 230 VQAAANLFDRMGSKDLYAWNAMISCYAQNGCAREALGIFNRMLKPHIWVVPNEKTFSSVI 289
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
C+ + LR G V + G +LD +R +L+ +Y+ G + A +F D+V
Sbjct: 290 SACSQLGDLRFGLWVENFMGYVGVDLDDHLRTALVDLYTKSGRMDRAFDLFRGLRSRDVV 349
Query: 225 TWNSMIDG---YVK-NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
++++MI G + K N VG +E+ + + T+ ++S Y G +E A F M
Sbjct: 350 SYSAMIVGCGMHGKLNEAVGLFKEMSKARIDPNAVTFVGLLSAYSHAGLLEEARACFTSM 409
Query: 281 PFRDVVS-----WNCMIDGYAKIGNVTSA 304
R ++ + M+D + G + A
Sbjct: 410 TSRYRINPSMEHYTIMVDILGRCGKLEEA 438
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 303/619 (48%), Gaps = 79/619 (12%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P+ L S + H ++L S ++ ++F + ++ L + + FD I
Sbjct: 20 SSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTY-ARLGRLRDARRVFDEI 78
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH----------- 155
+ F N ++ ++ L P A + + Y ++A H
Sbjct: 79 PLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRF 138
Query: 156 -----------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
N Y+F CA + R G++VH + + D+ +R++L+ MY+
Sbjct: 139 LAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAK 198
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPER------ 252
C DAR+VF+ P ++V+WNS+I Y +N VG A LF F P+
Sbjct: 199 CERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSV 258
Query: 253 ----------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
D+ N+++ Y G A +FD MP R
Sbjct: 259 MSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRS 318
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+VS ++ GYAK NV A+ F +M +NV++WN+L+A Y + + E +RLF ++ R
Sbjct: 319 IVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKR 378
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMYAK 398
P + +VL AC N+ + +GQ H ++ K + DV + SL+ MY K
Sbjct: 379 DSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 438
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G +D VF+ M ++ VSWN+MI+GY +G+ + AL +F M P+ T I V
Sbjct: 439 TGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGV 498
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
LSAC H+G+V EG YF M + I P +HY CMVDLLGRAG ++++EEL++ +PME
Sbjct: 499 LSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEP 558
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
LW +LL AC H N ELG+ A L EL+P++ GPYVLLSN+YA GKW EV +RR
Sbjct: 559 DSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRR 618
Query: 579 IMKEKELEKAVGSSLVHPG 597
MK++ + K G S + G
Sbjct: 619 SMKDRGVSKQPGCSWIEIG 637
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 302/570 (52%), Gaps = 67/570 (11%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQEPDA 121
L++C +++ QI TQ+L +G Q ++ + CT S+ ++ + F+ I P
Sbjct: 39 LKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMV-CCTDPSIGNLHYAERIFNYIDIPGL 97
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
F+ N ++K+F N F + ++ + + +++T+P + K + +REG+KV+
Sbjct: 98 FIYNLVIKAFTK-NGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYG 156
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+VK G E D +V NS++D Y + V
Sbjct: 157 FVVKSGLEFDTYV-------------------------------CNSLMDMYAEVGRVQN 185
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAA----NGLFDLMPFRDVVSWNCMIDGYAK 297
R++F+ MP+RD+ +WN +ISGYV E A +F+ MP + V+ W M+ GY
Sbjct: 186 LRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVN 245
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G + AR F+R +R+VV W ++ YV+ + + + LF M P+ +L+++
Sbjct: 246 CGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVAL 305
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
LT D ++ T+L+ MYAKCG ++ + +F+ + EK+
Sbjct: 306 LT-------------------------DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDT 340
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
SW S+I G M+G+ KALE+F EM + G P+D TFI VLSAC+H G+V EG +F
Sbjct: 341 ASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRS 400
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP---MEAGPALWGALLSACSTHS 534
M +Y+IEPK+EHYGC++DLLGRAG + ++EEL+ K P E L+GALLSAC TH
Sbjct: 401 MTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHG 460
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N E+G+ VA+ L+ +E D + LL+NIYAS +W++V +RR MK+ ++K G S V
Sbjct: 461 NVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSV 520
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEIG 624
E +V + +YSML I
Sbjct: 521 EVNGIVHEFLVGDASHPEMREIYSMLDSIA 550
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 299/569 (52%), Gaps = 76/569 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++ +V QIH LL GL + + L++ +L + SV F+ EP+ F
Sbjct: 54 IDKSKSVAHLLQIHASLLRRGLYHNPILNFK-LQRSYAALGRLDCSVFVFNTFDEPNVFS 112
Query: 124 CNTIMKSFL---MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ I+ S + + + FG YY
Sbjct: 113 FSAIIHSHVQSRLFDRAFG----YY----------------------------------- 133
Query: 181 ARIVKCGFELDLFVRNSLIHMYSV-CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
++++ CG E + F +S++ S+ G+VL + + ++
Sbjct: 134 SQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAI-----------------------KL 170
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
G D++ ++ Y GD+ A LFD MP R +VS M+ Y+K+G
Sbjct: 171 GLGS---------DLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMG 221
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR+ F+ M R+VV WN+++ Y + E L+LF RM+ A PNE ++++VL+
Sbjct: 222 ELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLS 281
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
AC +G ++ G+WIHSYI+ I+ +V + T+L+ MY+KCG ++ AR VFD + +K+VV+
Sbjct: 282 ACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVA 341
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WNSMI+GY MHG + AL++F EM + G P D TFI +LSAC H G+V EG +F LM+
Sbjct: 342 WNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMR 401
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y IEPK+EHYGCMV+LLGRAG + ++ LV + + A P LWG LL C H N +LG
Sbjct: 402 DKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLG 461
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
+ +A+ L++ + + G YVLLSN+YA+ G W+ V +R +MKE +EK G S +
Sbjct: 462 EEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNK 521
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E + + +Y ML EI + +K
Sbjct: 522 VHEFVAGERKHPKSKEIYVMLNEINSWLK 550
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 299/545 (54%), Gaps = 22/545 (4%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+ +CS K +H ++ G + F S ++ C S V + FDG+ E D +
Sbjct: 118 VAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYC-KFSRVVYARKVFDGMPERDTVL 176
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
NT++ L+ N F + +M+A V + T + A ++ L+ G +
Sbjct: 177 WNTMING-LVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLA 235
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K GF +V LI +YS CG+V AR +F DL+ +N+MI G+ N +
Sbjct: 236 LKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSV 295
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG--------- 294
+LF R++ +S VG + + F + + C+ G
Sbjct: 296 KLF-----RELLFSGERVSSSTIVG-LIPLHSPFGHLHLACSIHGFCVKSGIILNPTVST 349
Query: 295 -----YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
Y K+ + AR+ FD + VV+WN +++ Y + + LF M++ + P
Sbjct: 350 AFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTP 409
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
N ++ ++L+ACA +G + G+W+H I+ ++P++ +ST+L+ MYAKCG + A +F
Sbjct: 410 NAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLF 469
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D+M+EKN V+WN+MI GYG+HG G +AL+++ EM G P+ TF+ VL AC+HAG+V
Sbjct: 470 DSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVG 529
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG F M Y+IEP +EHY CMVD+LGR+G + + E + K+P+E GPA+WG LL A
Sbjct: 530 EGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGA 589
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H ++++ ++ ++ L EL+P G YVLLSNIY+ E + + ++R+++K+++L K+
Sbjct: 590 CMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSP 649
Query: 590 GSSLV 594
G +L+
Sbjct: 650 GCTLI 654
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 243/512 (47%), Gaps = 19/512 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+ ST Q H Q +++G D +++ +KL ++ LFF + +PD F+
Sbjct: 19 INKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFS-VPKPDIFL 77
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N +++ F + + P ++S Y + +++T+ C+ + L +HA
Sbjct: 78 FNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAHS 134
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN----REV 239
+ G+ ++FV ++L+ +Y V+ ARKVF+ P D V WN+MI+G VKN +
Sbjct: 135 IIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSI 194
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL-----MPFRDVVSWNCMIDG 294
RE+ D T +++ ++ +++ G+ L F D V +I
Sbjct: 195 QLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV-LTGLISL 253
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC-LRLFDRMIRGDAKPNEAS 353
Y+K G+V +AR F R+ +++++N +++ + EC ++LF ++ + + ++
Sbjct: 254 YSKCGDVNTARLLFRRINRPDLIAYNAMISGFT-ANGGTECSVKLFRELLFSGERVSSST 312
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
++ ++ + G + + IH + K I + +ST+ +Y K +DLAR++FD
Sbjct: 313 IVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP 372
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
EK VV+WN+MI GY +G E A+ +F EM K TPN T +LSAC G + G W
Sbjct: 373 EKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKW 432
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
L++ +EP + +VD+ + G + ++ +L + E W ++ H
Sbjct: 433 VHHLIKS-ENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLH 490
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+ ++ L +P LS +YA
Sbjct: 491 GYGHEALKLYNEMLHL-GYNPSAVTFLSVLYA 521
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/565 (34%), Positives = 294/565 (52%), Gaps = 61/565 (10%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+++ + QIH LL GL + L++ SL + SV F P+ F+
Sbjct: 30 IDNSKSTHHLLQIHAALLRRGLHHHPILNFK-LQRSYASLGHLHHSVTLFHRTPNPNVFL 88
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
I+ + + ALS YY +M+ ++ N +T L K C +L + VH+
Sbjct: 89 WTHIINAHAHFDLFHHALS-YYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHA 143
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G L+V L+ D Y + +V A+
Sbjct: 144 IKFGLSSHLYVSTGLV-------------------------------DAYARGGDVASAQ 172
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+LFD MPER + ++ +M++ Y G + A LF+ M +DVV WN MIDGYA+ G
Sbjct: 173 KLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNE 232
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F +M M + G +PNE ++++VL++C
Sbjct: 233 ALVFFRKMMMMMGGN------------------------GNGKVRPNEITVVAVLSSCGQ 268
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G ++ G+W+HSY++ IK +V + T+L+ MY KCG ++ AR VFD M K+VV+WNSM
Sbjct: 269 VGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSM 328
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
IMGYG+HG ++AL++F EM G P+D TF+ VL+AC HAG+V +GW FD M+ Y
Sbjct: 329 IMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYG 388
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+EPKVEHYGCMV+LLGRAG M+++ +LV + +E P LWG LL AC HSN LG+ +A
Sbjct: 389 MEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIA 448
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
+ L+ G YVLLSN+YA+ W V +R +MK +EK G S + E
Sbjct: 449 EILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEF 508
Query: 604 IVENCPPHRKCIVYSMLGEIGAQMK 628
+ + R +YSML ++ +K
Sbjct: 509 VAGDRRHPRSKDIYSMLEKMNGWLK 533
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 307/601 (51%), Gaps = 48/601 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL-------FFDGIQEPDAFMCNTI 127
QIH Q+L S + ++ + +L KL S+ ++S S F I P N +
Sbjct: 34 QIHAQILHSNTTPEN--TNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQL 91
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
++ + P + Y+ + ++FP L K + + + G ++H K G
Sbjct: 92 LRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLG 151
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
F D F++ LI MY+ C ++DAR +F+ D V WN +IDGY +N A LF+
Sbjct: 152 FVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFE 211
Query: 248 FMPERDI---------------------------------------FTWNSMISGYVDVG 268
M D+ ++I+ Y + G
Sbjct: 212 DMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCG 271
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
M+ A ++D + + ++ M+ GYAK+G V AR FD+M R++V W+ +++ Y
Sbjct: 272 AMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAE 331
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
E L+LFD M++ + P++ +++SV++AC+++G + WIH+Y+ + + +
Sbjct: 332 SDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSV 391
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+ +L+ MYAKCG + AR VF+NM KNV+SW+SMI + MHG + A+++F M++
Sbjct: 392 NNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNI 451
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
PN TFI VL AC HAG+V EG F M + I P EHYGCMVDL RA +R +
Sbjct: 452 EPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAI 511
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
EL+ +P +WG+L+SAC H +ELG+ A+ L+ELEP G V+LSNIYA E
Sbjct: 512 ELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEK 571
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+W++V +R+ M K + K SS + ++ + + +Y L E+ +++K
Sbjct: 572 RWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLK 631
Query: 629 M 629
+
Sbjct: 632 L 632
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 298/530 (56%), Gaps = 42/530 (7%)
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLL 163
SV ++ F + E D NT++ ++ FGA + + +M + N T+ +
Sbjct: 195 SVKKALELFAKMPERDTVSWNTMIS--ILSQHGFGAETLNTFLEMWNQGFRPNSMTYASV 252
Query: 164 GKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
C I L G +HARIV+ LD++ LI MY+ CG + AR+VF+ +
Sbjct: 253 LSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNA 312
Query: 224 VTWNSMIDG-------------YVKNREVGFARELFDF-------MPERDIF-------- 255
V+W S+I G + + REV A + F + ++DI
Sbjct: 313 VSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAH 372
Query: 256 -----------TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
N++++ Y GD+ AN F+LMP RD++SW MI +++ G+V A
Sbjct: 373 TITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKA 432
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
R FD+M RNV+SWN +LA Y++ + E L+++ +M+R K + + + ++ACA++
Sbjct: 433 REYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADL 492
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
V+ +G I + +K +V ++ S++TMY++CG ++ A+ +F ++ KN+VSWN+M+
Sbjct: 493 AVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMM 552
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
GY +GQG K +E+F +M G P+ +++ VLS C+H+G V EG +YF M + + I
Sbjct: 553 AGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGI 612
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
P EH+ CMVDLLGRAG + ++ L++++P + A+WGALL+AC H N++L ++ +
Sbjct: 613 SPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVK 672
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+L+EL+ PG Y LL+NIY+ GK V N+R++M++K + K G S +
Sbjct: 673 NLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWI 722
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 215/469 (45%), Gaps = 79/469 (16%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K CA +RS+ +K+HA+++ G + +F++N L++MYS CG + DA +VF ++
Sbjct: 12 KECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVY 71
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEA------------ 272
+WN+MI G+ + ++ A +LF+ MPERD +WNSM+SGY G++EA
Sbjct: 72 SWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLK 131
Query: 273 ------------------------------------ANGLFDLMPFRDVVSWNCMIDGYA 296
A +F P + WN MI GY+
Sbjct: 132 LALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYS 191
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G+V A F +M R+ VSWN ++++ + E L F M +PN + S
Sbjct: 192 KYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYAS 251
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
VL+AC ++ ++ G +H+ I R++P DV L+ MYAKCG ++ AR VFD +TE
Sbjct: 252 VLSACTSIYDLEWGAHLHARI--VRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE 309
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC-----------T 463
N VSW S+I G G E+AL +F +M + + T VL C
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQL 369
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HA + G ++ V +V + + G + + +P+ + W
Sbjct: 370 HAHTITRG------------LDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIIS-W 416
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
A+++A S + E + ++ ++ R+ + + Y G W+E
Sbjct: 417 TAMITAFSQAGDVEKAR---EYFDKMPERNVISWNSMLATYMQRGYWEE 462
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 293/535 (54%), Gaps = 36/535 (6%)
Query: 54 VDLSHPILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
+ L+ P L+K+ + CST K ++ + L+QD ++ + CTS + L+V
Sbjct: 769 LSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITA-CTSFKRLDLAVST 827
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
+QEP+ F+ N + K F+ + P +L Y +M+ V + YT+ L K A +
Sbjct: 828 MTQMQEPNVFVYNALFKGFVTCSHPIRSLELYV-RMLRDSVSPSSYTYSSLVK--ASSFA 884
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
R G+ + A I K GF + ++ +LI YS G + +ARKV
Sbjct: 885 SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV------------------ 926
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
FD MPERD W +M+S Y V DM++AN L + M ++ + NC+I
Sbjct: 927 -------------FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 973
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+GY +GN+ A + F++M +++++SW ++ Y + K Y E + +F +M+ P+E
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 1033
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++ +V++ACA++GV++IG+ +H Y + DV + ++L+ MY+KCG ++ A VF N+
Sbjct: 1034 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 1093
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+KN+ WNS+I G HG ++AL+MF +ME PN TF+ V +ACTHAG+V EG
Sbjct: 1094 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 1153
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+ M Y I VEHYG MV L +AGL+ ++ EL+ + E +WGALL C
Sbjct: 1154 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 1213
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
H N + +I LM LEP + G Y LL ++YA + +W +V +R M+E +EK
Sbjct: 1214 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/604 (32%), Positives = 321/604 (53%), Gaps = 46/604 (7%)
Query: 31 PPKLWANEPK--PKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQD 88
P L +P+ PKFT DL + IL T+K ++H+++L+
Sbjct: 19 PFSLTTQKPQLSPKFTALTE------DLCNKILDVNPDAKTLK---KLHSKILIDQNLHP 69
Query: 89 SFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKM 148
+ + L + + + FD I + + N +++S++ N + ++ M
Sbjct: 70 NPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN-NGLYQDALLVFKTM 128
Query: 149 MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
+ ++YT+P + K C+ +L G ++H +VK G +++L++ N L+ MY C +
Sbjct: 129 ANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWL 188
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA----RELFDFMPERDIFTWNSMISGY 264
AR+V ++ P D+V+WNSM+ GY +N A RE+ D + D T S++
Sbjct: 189 DAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA- 247
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
V + +C NV ++ F ++ ++++SWN+++A
Sbjct: 248 --------------------VTNTSC--------DNVLYVKDMFVKLKEKSLISWNVMIA 279
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+YV E + L+ +M +P+ S+ SVL AC ++ +G+ IH Y+++ +++P
Sbjct: 280 VYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRP 339
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
++LL +L+ MYAKCG + AR VFD M ++VVSW SMI YGM GQG+ A+ +F +M
Sbjct: 340 NLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMR 399
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
G TP+ F+ VL+AC+HAG+V EG + F+LM Y I P +EHY CMVDLLGRAG +
Sbjct: 400 DSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKI 458
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ L ++PME +WG+LLSAC +S+ + + A HL +L P G YVLLSNIY
Sbjct: 459 DEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIY 518
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIG 624
A G+W +VE +R IM K ++K G+S V + + + + +Y LG +
Sbjct: 519 AKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLV 578
Query: 625 AQMK 628
+MK
Sbjct: 579 GRMK 582
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 293/535 (54%), Gaps = 36/535 (6%)
Query: 54 VDLSHPILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
+ L+ P L+K+ + CST K ++ + L+QD ++ + CTS + L+V
Sbjct: 24 LSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITA-CTSFKRLDLAVST 82
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
+QEP+ F+ N + K F+ + P +L Y +M+ V + YT+ L K A +
Sbjct: 83 MTQMQEPNVFVYNALFKGFVTCSHPIRSLELYV-RMLRDSVSPSSYTYSSLVK--ASSFA 139
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
R G+ + A I K GF + ++ +LI YS G + +ARKV
Sbjct: 140 SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV------------------ 181
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
FD MPERD W +M+S Y V DM++AN L + M ++ + NC+I
Sbjct: 182 -------------FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 228
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+GY +GN+ A + F++M +++++SW ++ Y + K Y E + +F +M+ P+E
Sbjct: 229 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++ +V++ACA++GV++IG+ +H Y + DV + ++L+ MY+KCG ++ A VF N+
Sbjct: 289 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+KN+ WNS+I G HG ++AL+MF +ME PN TF+ V +ACTHAG+V EG
Sbjct: 349 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 408
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+ M Y I VEHYG MV L +AGL+ ++ EL+ + E +WGALL C
Sbjct: 409 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 468
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
H N + +I LM LEP + G Y LL ++YA + +W +V +R M+E +EK
Sbjct: 469 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 523
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 292/530 (55%), Gaps = 41/530 (7%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L + ++ +F+ + E D N ++ + AL E M K V + T+
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE-MHRKGVRLDSTTYTS 265
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
CA + SL GK++HA++++ ++D +V ++LI +Y+ CG +A++VF +
Sbjct: 266 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 325
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM--------------------------------- 249
V+W +I G ++ + ELF+ M
Sbjct: 326 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHS 385
Query: 250 ------PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
R I NS+IS Y GD++ A +F M RD+VSW MI Y++IGN+
Sbjct: 386 LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIK 445
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACA 362
AR FD M RN ++WN +L Y++ + L+++ M+ + D P+ + +++ CA
Sbjct: 446 AREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCA 505
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
++G +G I + K + +V ++ + +TMY+KCG + A+ +FD + K+VVSWN+
Sbjct: 506 DIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNA 565
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
MI GY HG G++A + F +M +G P+ +++ VLS C+H+G+V EG YFD+M R++
Sbjct: 566 MITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVH 625
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
I P +EH+ CMVDLLGRAG + ++++L+ K+PM+ +WGALLSAC H N EL ++
Sbjct: 626 GISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELA 685
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
A+H+ EL+ D G Y+LL+ IY+ GK D+ +R++M++K ++K G S
Sbjct: 686 AKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 735
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 162/344 (47%), Gaps = 46/344 (13%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DGPVWDL 223
+ C +L + +H R+V G +F++N+L+H Y CG + DAR++ D ++
Sbjct: 28 RSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNV 87
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISG-------------------- 263
+T N M++GY K + A ELFD MP RD+ +WN+++S
Sbjct: 88 ITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELA 147
Query: 264 -------------------------YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+V G ++ A+ LF + + N M+ GYAK+
Sbjct: 148 PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 207
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
+ A F+ M R+VVSWN+++A + E L L M R + + + S L
Sbjct: 208 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 267
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
TACA + + G+ +H+ + + + D ++++L+ +YAKCG A+ VF+++ ++N V
Sbjct: 268 TACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 327
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
SW +I G + K++E+F +M + ++S C
Sbjct: 328 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 192/434 (44%), Gaps = 45/434 (10%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H +++ S D + AS L +L S + F+ +Q+ ++ ++ L
Sbjct: 281 QLHAKVIRSLPQIDPYVAS-ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQY 339
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ F + +M A+ + + + L C L G+++H+ +K G + V
Sbjct: 340 -ECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 398
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
NSLI +Y+ CG++ +A VF D+V+W SMI Y + + ARE FD M R+
Sbjct: 399 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA 458
Query: 255 FTWNSMISGYVDVGDMEAANGLF-------DLMP--------FR---------------- 283
TWN+M+ Y+ G E ++ D+ P FR
Sbjct: 459 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 518
Query: 284 ---------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+V N I Y+K G ++ A+ FD + ++VVSWN ++ Y + +
Sbjct: 519 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 578
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLL 393
+ FD M+ AKP+ S ++VL+ C++ G++ G+ + + I P + + ++
Sbjct: 579 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 638
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ + G + A+++ D M K W +++ +HG E A E+ + +P+
Sbjct: 639 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA-ELAAKHVFELDSPDS 697
Query: 453 ATFICVLSACTHAG 466
+++ + + AG
Sbjct: 698 GSYMLLAKIYSDAG 711
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 204/485 (42%), Gaps = 61/485 (12%)
Query: 56 LSHPILQKL----ESCST---VKEFHQIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSV 106
L H + Q L SC + + +H +L+ GL+ F + +L C +LS
Sbjct: 15 LPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDA 74
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-----NHYTFP 161
L I+EP+ N +M + A + ++M + V + + P
Sbjct: 75 RR--LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELF-DRMPRRDVASWNTLMSDTSRP 131
Query: 162 LLGKVCAGIRSLRE-GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
+ G RE ++ K F D V +L+ M+ CG V A ++F
Sbjct: 132 AGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 191
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL---- 276
+ NSM+ GY K + A E F+ M ERD+ +WN MI+ G + A GL
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251
Query: 277 ----------------------FDL-------------MPFRDVVSWNCMIDGYAKIGNV 301
F L +P D + +I+ YAK G+
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
A+ F+ + RN VSW +L+ ++ + + + + LF++M ++ +L ++++ C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
N + +G+ +HS K +++S SL+++YAKCG + A VF +M+E+++VSW
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
SMI Y G KA E F M R N T+ +L A G +G + M
Sbjct: 432 SMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 482 YKIEP 486
+ P
Sbjct: 488 KDVTP 492
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 293/534 (54%), Gaps = 43/534 (8%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKS---F 131
Q+H++L+ G D+F + ++ S + FD + E + N+I+ + F
Sbjct: 196 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEES-CLKVFDEMGERNQVTWNSIISAEAQF 254
Query: 132 LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD 191
ND + F + ++ + +TF L +CA R+ +G+++HA +++ +
Sbjct: 255 GHFNDAL--VLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 312
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP- 250
+ V L+HMYS CG + A+++F + +WNSMI+GY +N E A LF M
Sbjct: 313 IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQL 372
Query: 251 ---ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN-----CMIDGYAKIGNVT 302
+ D F+ +SM+S V + D + L + + R+ + ++D YAK G++
Sbjct: 373 NGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFI-VRNTMEEEGILQVVLVDMYAKCGSMD 431
Query: 303 SARNCFDRMCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
A +D+ RN WN +LA Y E F M+ D + + ++++++
Sbjct: 432 YAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL 491
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
++L T+L+ MY+KCG + AR VFDNM KN+VSW
Sbjct: 492 -------------------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 526
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N+MI GY HG ++AL ++ EM K+G PN+ TF+ +LSAC+H G+V EG F MQ
Sbjct: 527 NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 586
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y IE K EHY CMVDLLGRAG + D++E V K+P+E + WGALL AC H + ++G+
Sbjct: 587 DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGR 646
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ AQ L EL+P++PGPYV++SNIYA+ G+W EVE++R++MK K ++K G S +
Sbjct: 647 LAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 700
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 250/526 (47%), Gaps = 41/526 (7%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSH-PILQKLESCSTVKEFHQ---IHTQLLVSGLSQDSFAA 92
+ PKP T P D++ P ++ C F + IHTQ++ +G + D++
Sbjct: 54 DSPKPTSIHTK----PASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLM 109
Query: 93 SRVLKKLCTS--LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMA 150
+++L S L + + F+ + E + NT++ ++ ++D A + ++M+
Sbjct: 110 TKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIF-DRMLK 168
Query: 151 KFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD 210
V +++TF +VC +RS GK+VH++++ CGF+ D FV N+LI MY+ C +
Sbjct: 169 IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES 228
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER------DIFTWNSMIS-- 262
KVF++ + VTWNS+I + A LF M E D FT+ ++++
Sbjct: 229 CLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLC 288
Query: 263 --GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
D + L ++++ ++ Y++ G + A+ F+RM RN SWN
Sbjct: 289 ANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWN 348
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC 380
++ Y + + E LRLF +M KP+ SL S+L++C ++ G+ +H++I +
Sbjct: 349 SMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 408
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK--NVVSWNSMIMGYGMHGQGEKALE 438
++ + +L L+ MYAKCG MD A V+D +K N WNS++ GY G +++
Sbjct: 409 TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFN 468
Query: 439 MFMEMEKRGPTPNDATFICVLSAC----------THAGMVLEGWWYFDLMQRIYKIEPKV 488
F+EM + + T + +++ + G + + FD M +
Sbjct: 469 HFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMN-----GKNI 523
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLP---MEAGPALWGALLSACS 531
+ M+ + G +++ L ++P M + A+LSACS
Sbjct: 524 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACS 569
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 197/429 (45%), Gaps = 74/429 (17%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C S + GK +H +++ G+ D ++ ++ +Y+ G LD
Sbjct: 81 CIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSG-CLD---------------- 123
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------ 280
++ +AR+LF+ MPER++ WN+MI Y V D A G+FD M
Sbjct: 124 -----------DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVC 172
Query: 281 --------------------------------PFR-DVVSWNCMIDGYAKIGNVTSARNC 307
F+ D N +ID YAK + S
Sbjct: 173 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKV 232
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACANMG 365
FD M RN V+WN +++ + + + L LF RM + +P++ + ++LT CAN
Sbjct: 233 FDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQR 292
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+ IH+++ + I ++++ T L+ MY++CG ++ A+ +F+ M E+N SWNSMI
Sbjct: 293 NDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIE 352
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY +G+ ++AL +F +M+ G P+ + +LS+C +G + + R E
Sbjct: 353 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 412
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSK-LPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
+ +VD+ + G M + ++ + + + ALW ++L+ ++N L K
Sbjct: 413 EGILQV-VLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG---YANKGLKKESFN 468
Query: 545 HLMELEPRD 553
H +E+ D
Sbjct: 469 HFLEMLESD 477
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 272/483 (56%), Gaps = 16/483 (3%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFV----EHNHYTFPLLGKVCAGIRS-LREGKKV 179
N ++ S DP A + ++A + YT P K CA + LREG +
Sbjct: 81 NALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQA 140
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA K GF + V+N+L+ Y CG+ DARKVF++ D+V+W +++ + +
Sbjct: 141 HAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRG--- 197
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRD----VVSWNCM 291
G E + E D+ T S++ ++G A + R+ ++ N +
Sbjct: 198 GMFMEALGVLAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNAL 257
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+D Y K + AR FD + R++VSW ++++ V+CK E L +F+ M KP++
Sbjct: 258 LDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDK 317
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
L +VL+ACA++G ++ G+W+H YI++ I+ DV + TS++ MY KCG +D A ++F
Sbjct: 318 VVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQE 377
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M KNV SWN++I G+ +HG+G +AL+ F M G PN+ TFI VL AC H+G+V EG
Sbjct: 378 MPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEG 437
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F+LM + YK+ P +HYGCMVDLLGRAGL++++ +++ +PM G W LLSAC
Sbjct: 438 RQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQ 497
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H + + + H+ ELE G YVLLSN+YA +W +V R M EK ++K GS
Sbjct: 498 AHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGS 557
Query: 592 SLV 594
S++
Sbjct: 558 SVI 560
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 313/561 (55%), Gaps = 37/561 (6%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLS--QDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
++ ++ CSTVK+ QIH +L++G + + +L + + + + +
Sbjct: 6 LITLMKKCSTVKQAKQIHAHILINGFTFLRPLLIHRMLLWDVTNYRTMANYAYSMLHHLH 65
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
PD+F +++ F A+S Y + +H L K CA I + G
Sbjct: 66 IPDSFSWGCVIRFFSQKCLFTEAVSLYVQMHRTSLCPTSHAVSSAL-KSCARIHDMLCGM 124
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+H ++ GF ++V+ +L+ +YS G++ ARKVF++ +V+WNS++ GYVK
Sbjct: 125 SIHGQVHVFGFNTCVYVQTALLDLYSKIGDMGTARKVFDEMANKSVVSWNSLLSGYVKAG 184
Query: 238 EVGFARELFDFMPERDIFTWNSMISGY-------------------------------VD 266
+ A+ LF +P +D+ +WNSMISGY +D
Sbjct: 185 NLDEAQYLFSEIPGKDVISWNSMISGYAKAGNVGQACTLFQRMPERNLSSWNAMIAGFID 244
Query: 267 VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALY 326
G + +A FD MP R+ VSW MI GY+K G+V SAR FD+M ++++S+N ++A Y
Sbjct: 245 CGSLVSAREFFDTMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACY 304
Query: 327 VRCKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+ E L LF+ M++ D P++ +L SV++AC+ +G ++ WI S++ I
Sbjct: 305 AQNSKPKEALELFNDMLKQDIYVHPDKMTLASVISACSQLGDLEHWWWIESHMNDFGIVL 364
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
D L+T+L+ +YAKCG +D A +F N+ ++++V++++MI G G++G+ A+++F +M
Sbjct: 365 DDHLATALIDLYAKCGSIDKAYELFHNLRKRDLVAYSAMIYGCGINGKASDAIKLFEQML 424
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
PN T+ +L+A HAG+V +G+ F+ M+ Y + P ++HYG MVDL GRAG +
Sbjct: 425 AECIGPNLVTYTGLLTAYNHAGLVEKGYQCFNSMKD-YGLVPSIDHYGIMVDLFGRAGYL 483
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ +L+ +PM+ +WGALL AC H+N ELG+I QH ++LE G LLS+IY
Sbjct: 484 DEAYKLILNMPMQPNAGVWGALLLACRLHNNVELGEIAVQHCIKLETDTTGYCSLLSSIY 543
Query: 565 ASEGKWDEVENLRRIMKEKEL 585
A+ KWD+ + LR+ M+ K+
Sbjct: 544 ATVEKWDDAKKLRKGMEGKDF 564
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 244/393 (62%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G V +AR++F++ +++TW +MI GY +N+ V AR+LF+ MPE+ +W SM+ GY
Sbjct: 186 GRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G +E A F++MP + V++ N MI ++G + AR FD+M R+ +W ++
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKA 305
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y R E L LF +M R +P+ SL+S+L+ CA + + G+ +H+++ +C+ D
Sbjct: 306 YERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGD 365
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
V +++ L+TMY KCG + A+ VFD K+++ WNS+I GY HG GE+AL++F EM
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPL 425
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G PN T I +L+AC++ G + EG F+ M+ + + P VEHY C VD+LGRAG +
Sbjct: 426 SGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVD 485
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+ EL++ + ++ +WGALL AC THS +L ++ A+ L E+EP + GPY+LLS+I A
Sbjct: 486 KAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINA 545
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
S KW +V +R+ M+ K + K G S + G+
Sbjct: 546 SRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGK 578
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 183/359 (50%), Gaps = 23/359 (6%)
Query: 194 VRNSL-IHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
V NS I S G++ +ARK F+ + +WNS++ GY N AR++FD MPER
Sbjct: 18 VNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPER 77
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+I +WN ++SGY+ +E A +F++MP R+VVSW M+ GY + G V A F RM
Sbjct: 78 NIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMP 137
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RN VSW ++ + + +L+D M D + +++ G +D +
Sbjct: 138 ERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDV----VASTNMIGGLCREGRVDEARE 193
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
I ++ + +V+ T+++T Y + +D+AR +F+ M EK VSW SM++GY + G+
Sbjct: 194 IFDEMR----ERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
E A E F M + +A + A G +++ FD M+ + +
Sbjct: 250 IEDAEEFFEVMPMKPVIACNAMIV----ALGEVGEIVKARRVFDQME-----DRDNATWR 300
Query: 493 CMVDLLGRAGLMRDSEELVSKLPME----AGPALWGALLSACSTHSNSELGKIVAQHLM 547
M+ R G ++ EL +++ + + P+L ++LS C+T ++ + G+ V HL+
Sbjct: 301 GMIKAYERKGFELEALELFAQMQRQGVRPSFPSLI-SILSVCATLASLQYGRQVHAHLV 358
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 11/222 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD +++ D ++K++ AL + + M + V + + + VCA + S
Sbjct: 288 FDQMEDRDNATWRGMIKAYERKGFELEALELFAQ-MQRQGVRPSFPSLISILSVCATLAS 346
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L+ G++VHA +V+C F+ D++V + L+ MY CGE++ A+ VF+ P D++ WNS+I G
Sbjct: 347 LQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISG 406
Query: 233 YVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLFDLMPFRDVVS- 287
Y + A ++F MP T ++++ G +E +F+ M + V+
Sbjct: 407 YASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTP 466
Query: 288 ----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
++C +D + G V A + M ++ + W LL
Sbjct: 467 TVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLG 508
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 286/508 (56%), Gaps = 45/508 (8%)
Query: 158 YTFPLLG-KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC--GEVLDARKV 214
+ PL G C+ ++ E K+ H++I++ G D +I ++ G++ A +V
Sbjct: 20 HKLPLYGLDSCS---TMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEV 76
Query: 215 FEDGPVWDLVTWNSMIDGYVK-----NREVGFAREL-------------------FDFMP 250
F+ P D +N++ GY++ N ++R L D+
Sbjct: 77 FDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAI 136
Query: 251 ER---------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
E D F+ N++I YV+ +E A +FD MP RDVVSW +I GY
Sbjct: 137 EEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGY 196
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
++ G V AR F+ M RN VSWN ++A YV+ E LFDRM + ++
Sbjct: 197 SQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 256
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
S+L+AC +G ++ G+WIH YI+K I+ D L+T+++ MY KCG ++ A VF+ + +K
Sbjct: 257 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 316
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+ SWN MI G MHG+GE A+E+F EME+ P+ TF+ VLSAC H+G+V EG YF
Sbjct: 317 GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYF 376
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
M + ++P +EH+GCMVDLLGRAGL+ ++ +L++++P+ + GAL+ AC H N
Sbjct: 377 QYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN 436
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+ELG+ + + ++ELEP + G YVLL+N+YAS G+W++V +R++M ++ ++KA G S++
Sbjct: 437 TELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 496
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEI 623
E I + +Y+ L EI
Sbjct: 497 SESGVDEFIAGGRAHPQAKEIYAKLDEI 524
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 223/471 (47%), Gaps = 58/471 (12%)
Query: 41 PKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC 100
P + +LP L L+SCST+ E Q H+Q++ GLS D+ A RV+K
Sbjct: 12 PSLSSAKAHKLP--------LYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCA 63
Query: 101 TSLSS-VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYT 159
S S ++ ++ FD I PDA++ NTI + +L + F Y +M+ K V N +T
Sbjct: 64 ISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCI-FMYSRMLHKSVSPNKFT 122
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+P L + C ++ EGK++HA ++K GF D F N+LIHMY + AR+VF++ P
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
D+V+W S+I GY + V ARE+F+ MPER+ +WN+MI+ YV + A LFD
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 280 MPFRDVV----------------------SW-----------------NCMIDGYAKIGN 300
M +VV W +ID Y K G
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 302
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ A F+ + + + SWN ++ + LF M R P+ + ++VL+A
Sbjct: 303 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 362
Query: 361 CANMGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVV 418
CA+ G+++ G+ Y+ + +KP + ++ + + G+++ AR + + M +
Sbjct: 363 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAG 422
Query: 419 SWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+++ +HG GE+ + +E+E N ++ + + AG
Sbjct: 423 VLGALVGACRIHGNTELGEQIGKKVIELEPH----NSGRYVLLANLYASAG 469
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 292/530 (55%), Gaps = 41/530 (7%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L + ++ +F+ + E D N ++ + AL E M K V + T+
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE-MHRKGVRLDSTTYTS 275
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
CA + SL GK++HA++++ ++D +V ++LI +Y+ CG +A++VF +
Sbjct: 276 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 335
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM--------------------------------- 249
V+W +I G ++ + ELF+ M
Sbjct: 336 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHS 395
Query: 250 ------PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
R I NS+IS Y GD++ A +F M RD+VSW MI Y++IGN+
Sbjct: 396 LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIK 455
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACA 362
AR FD M RN ++WN +L Y++ + L+++ M+ + D P+ + +++ CA
Sbjct: 456 AREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCA 515
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
++G +G I + K + +V ++ + +TMY+KCG + A+ +FD + K+VVSWN+
Sbjct: 516 DIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNA 575
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
MI GY HG G++A + F +M +G P+ +++ VLS C+H+G+V EG YFD+M R++
Sbjct: 576 MITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVH 635
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
I P +EH+ CMVDLLGRAG + ++++L+ K+PM+ +WGALLSAC H N EL ++
Sbjct: 636 GISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELA 695
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
A+H+ EL+ D G Y+LL+ IY+ GK D+ +R++M++K ++K G S
Sbjct: 696 AKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 197/472 (41%), Gaps = 47/472 (9%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
V L + +L SC + + + LL + + + + ++ S+S + F
Sbjct: 39 VFLQNTLLHAYLSCGALSDARR----LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELF 94
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
D + D NT+M + L + + N +TF + K C +
Sbjct: 95 DRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCR 154
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
++ K F D V +L+ M+ CG V A ++F + NSM+ GY
Sbjct: 155 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 214
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL----------------- 276
K + A E F+ M ERD+ +WN MI+ G + A GL
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 274
Query: 277 ---------FDL-------------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
F L +P D + +I+ YAK G+ A+ F+ + R
Sbjct: 275 SSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 334
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
N VSW +L+ ++ + + + + LF++M ++ +L ++++ C N + +G+ +H
Sbjct: 335 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S K +++S SL+++YAKCG + A VF +M+E+++VSW SMI Y G
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
KA E F M R N T+ +L A G +G + M + P
Sbjct: 455 KAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 192/434 (44%), Gaps = 45/434 (10%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H +++ S D + AS L +L S + F+ +Q+ ++ ++ L
Sbjct: 291 QLHAKVIRSLPQIDPYVAS-ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQY 349
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ F + +M A+ + + + L C L G+++H+ +K G + V
Sbjct: 350 -ECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
NSLI +Y+ CG++ +A VF D+V+W SMI Y + + ARE FD M R+
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA 468
Query: 255 FTWNSMISGYVDVGDMEAANGLF-------DLMP--------FR---------------- 283
TWN+M+ Y+ G E ++ D+ P FR
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528
Query: 284 ---------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+V N I Y+K G ++ A+ FD + ++VVSWN ++ Y + +
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLL 393
+ FD M+ AKP+ S ++VL+ C++ G++ G+ + + I P + + ++
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ + G + A+++ D M K W +++ +HG E A E+ + +P+
Sbjct: 649 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA-ELAAKHVFELDSPDS 707
Query: 453 ATFICVLSACTHAG 466
+++ + + AG
Sbjct: 708 GSYMLLAKIYSDAG 721
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 50/360 (13%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ C +L + +H R+V G +F++N+L+H Y CG + DAR++
Sbjct: 12 RSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD------ 65
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+ E ++ T N M++GY G + A LFD MP RD
Sbjct: 66 ------------------------IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD 101
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRM-----CMRNVVSWNILLAL--YVRCKDYC-ECL 336
V SWN ++ GY + F M + N ++ ++ + C++ + L
Sbjct: 102 VASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL 161
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF + E +L+ + C G +D + S I+ +P + S+L Y
Sbjct: 162 GLFWKFDFWGDPDVETALVDMFVRC---GYVDFASRLFSQIE----RPTIFCRNSMLAGY 214
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
AK +D A F++M E++VVSWN MI G+ +AL + +EM ++G + T+
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 274
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKL 514
L+AC + W L ++ + P+++ Y +++L + G ++++ + + L
Sbjct: 275 SSLTACAR---LFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 296/528 (56%), Gaps = 12/528 (2%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH + G + D F S ++ + SV + F+ + E D +++ +
Sbjct: 143 IHALVRRIGFTSDVFVMSGLVNYY-GAFRSVKEASKVFEEMYERDVVSWTSMISACAQCG 201
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
L E M A+ + N T L C +++ EG+ V+ ++ K G E D+ +R
Sbjct: 202 HWDKVLKMLSE-MQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIR 260
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----PE 251
N+LI MY+ CG + DA + F+ P +WN++IDG+V+N E A +F+ M
Sbjct: 261 NALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVT 320
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARNC 307
D T S++S +G++ + + D + N +I+ YAK G++ +A
Sbjct: 321 PDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERV 380
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F M ++VVSW +++ YV+ + LF+ M + +E +L+S+L+AC+ +G +
Sbjct: 381 FQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGAL 440
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D G+ IHSYI++ + D+ L ++L+ MYAKCG +D A +F M K +SWN+MI G
Sbjct: 441 DKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGL 500
Query: 428 GMHGQGEKALEMFMEM-EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
+G G++A+E+F +M E + P P+ T VL AC H GMV EG YF LM + + P
Sbjct: 501 ASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVP 559
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
EHYGC+VDLLGRAG++ ++ + K+P+E P +WG+LL+AC H +LGK++ QH+
Sbjct: 560 DTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHI 619
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ + P D G +VL+SN++A E +WD+VE++R +M + +EK G S V
Sbjct: 620 VNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSV 667
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FD M N WN ++ Y C+ + L +F M R P+ ++ +V++A A
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 364 MGVI---DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
+ G IH+ +++ DV + + L+ Y + A VF+ M E++VVSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSW 190
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
SMI G +K L+M EM+ G PN T I +LSAC V EG W ++ + +
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA-CSTHSNSELG 539
+ IE V+ ++ + + G + D+ E +P + W L+ H + E
Sbjct: 251 -FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS-WNTLIDGFVQNHEHKEAL 308
Query: 540 KIVAQHLME 548
+I + L+
Sbjct: 309 RIFEEMLLH 317
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV---MD 403
A+P L++ L ACA+ + +H + + + D ++ L+ + A M
Sbjct: 13 ARPIRHHLLAYLDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMR 69
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
AR VFD M + N WN MI GY AL +F EM +RG +P++ T
Sbjct: 70 YARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYT 120
>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/572 (33%), Positives = 306/572 (53%), Gaps = 35/572 (6%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL--FFDGIQ 117
IL LE C T+ E ++H ++ + + QD SR++ C S +L+ F+ I
Sbjct: 8 ILSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVD-FCAYSDSGNLNYAKSVFNQID 66
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P ++ N+++K + + P AL+ Y E M K +H+TFP + K C+ + G+
Sbjct: 67 RPSLYIWNSMIKGYSISESPDEALTMYRE-MRQKGYAPDHFTFPFVLKACSLVNGYNLGQ 125
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
VH IVK GFE+D++ +L+ MY+ CG++ A KVF+D P W++V W S+I G + N
Sbjct: 126 CVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISND 185
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
A ++ +D+ W+ V ++ N L RD+ + + D +
Sbjct: 186 CPSEAVRVY-----KDMELWS------VAPNEITMVNVLVACARSRDLNAGRWVHDRTGQ 234
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCK-----DYCECLRLFDRMIRGDAKPNEA 352
+G + F NV+ ++ +Y +C E L LF M P++A
Sbjct: 235 MG-----LDPFQSNSNFNVILATAIVDMYAKCAYNQYGQANEALDLFSDMRIAGFDPDKA 289
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ + V+ ACA++G + GQ +H+Y+ K + D + T+L+ MYAK G + A+ VF +
Sbjct: 290 TFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSEL 349
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDATFICVLSACTHAGMVLEG 471
+K+V +W S+I+G MHG GE+AL F +M E P++ T+I VLSAC+H G V +G
Sbjct: 350 QKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDG 409
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+F M+ ++ IEP +HYGCMVDLL RAG + ++E LV K+P+E A+W ALL+ C
Sbjct: 410 KNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCK 469
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
+ N ++ V + + ELE G YVLLSNIYA +W+EV+ R +MKE++++K++G
Sbjct: 470 IYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKERKIQKSLGH 529
Query: 592 SLV---------HPGEFASESIVENCPPHRKC 614
S V H PP R C
Sbjct: 530 SSVEMKMVGGALHNVSVQRAESTGQQPPSRSC 561
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 296/528 (56%), Gaps = 12/528 (2%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH + G + D F S ++ + SV + F+ + E D +++ +
Sbjct: 143 IHALVRRIGFTSDVFVMSGLVNYY-GAFRSVEEASKVFEEMYERDVVSWTSMISACAQCG 201
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
L E M A+ + N T L C +++ EG+ V+ ++ K G E D+ +R
Sbjct: 202 HWDKVLKMLSE-MQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIR 260
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----PE 251
N+LI MY+ CG + DA + F+ P +WN++IDG+V+N E A +F+ M
Sbjct: 261 NALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVT 320
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARNC 307
D T S++S +G++ + + D + N +I+ YAK G++ +A
Sbjct: 321 PDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERV 380
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F M ++VVSW +++ YV+ + LF+ M + +E +L+S+L+AC+ +G +
Sbjct: 381 FQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGAL 440
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D G+ IHSYI++ + D+ L ++L+ MYAKCG +D A +F M K +SWN+MI G
Sbjct: 441 DKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGL 500
Query: 428 GMHGQGEKALEMFMEM-EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
+G G++A+E+F +M E + P P+ T VL AC H GMV EG YF LM + + P
Sbjct: 501 ASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVP 559
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
EHYGC+VDLLGRAG++ ++ + K+P+E P +WG+LL+AC H +LGK++ QH+
Sbjct: 560 DTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHI 619
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ + P D G +VL+SN++A E +WD+VE++R +M + +EK G S V
Sbjct: 620 VNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSV 667
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 6/249 (2%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FD M N WN ++ Y C+ + L +F M R P+ ++ +V++A A
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 364 MGVI---DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
+ G IH+ +++ DV + + L+ Y ++ A VF+ M E++VVSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSW 190
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
SMI G +K L+M EM+ G PN T I +LSAC V EG W ++ + +
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA-CSTHSNSELG 539
+ IE V+ ++ + + G + D+ E +P + W L+ H + E
Sbjct: 251 -FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS-WNTLIDGFVQNHEHKEAL 308
Query: 540 KIVAQHLME 548
+I + L+
Sbjct: 309 RIFEEMLLH 317
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV---MD 403
A+P L++ L ACA+ + +H + + + D ++ L+ + A M
Sbjct: 13 ARPIRHHLLAYLDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMR 69
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
AR VFD M + N WN MI GY AL +F EM +RG +P++ T
Sbjct: 70 YARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYT 120
>gi|195651797|gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 262/482 (54%), Gaps = 40/482 (8%)
Query: 155 HNHYTFPLLGKVCAGIR--SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
H+ P+L K A L GK +HA +K F DL V +++ MY CG + DAR
Sbjct: 52 HHQPLLPVLLKAAAASSPTELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADAR 111
Query: 213 KVFEDGP-------------------------------VWDLVTWNSMIDGYVKNREVGF 241
+ F++ P W VTW ++I G+ + ++
Sbjct: 112 RAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMAE 171
Query: 242 ARELFDFMPE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR F+ P R + TW ++ GYV GDME A +FD MP R+ W+ M+ GY K G
Sbjct: 172 ARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAG 231
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR FDR+ RN+V+WN L+A Y + + L F M++ KP+E ++ S+L+
Sbjct: 232 DAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMASLLS 291
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G ++ G+ +H +I + I+ + + L+ MYAKCG + AR +FD+M KN
Sbjct: 292 ACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNEC 351
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI HGQ ++AL +F +ME+ G PN T + VL ACTH G V EG F+ +
Sbjct: 352 WNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIFNKLD 411
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y + VEHYGC+VDLLGRAG ++++ E+V+ + E +WG+LL AC H ++E+
Sbjct: 412 -AYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVHRDAEMS 470
Query: 540 KIVAQHLMELE----PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
++V + ++ L + Y++L+NI A+ +W++ E +RR M + +EK G S +
Sbjct: 471 RLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKTPGCSSLE 530
Query: 596 PG 597
G
Sbjct: 531 LG 532
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 14/223 (6%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD I + N ++ + + AL ++ M+ + V+ + +T L CA + S
Sbjct: 240 FDRIPTRNLVNWNALIAGYAQIGCSEQALEAFH-LMLQERVKPDEFTMASLLSACAQLGS 298
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L +GKKVH I + + FV N LI MY+ CG++ AR +F+ + WN+MI
Sbjct: 299 LEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTMISA 358
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMI----------SGYVDVGDMEAANGLFDLMPF 282
+ + A LF F ER N++ G+VD G ++ N L
Sbjct: 359 LASHGQSDEALHLF-FQMERSGRKPNTITVLAVLGACTHGGFVDEG-LQIFNKLDAYGVG 416
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + C++D + G + A + M N V W LL
Sbjct: 417 AGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLG 459
>gi|242048094|ref|XP_002461793.1| hypothetical protein SORBIDRAFT_02g008110 [Sorghum bicolor]
gi|241925170|gb|EER98314.1| hypothetical protein SORBIDRAFT_02g008110 [Sorghum bicolor]
Length = 601
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 273/501 (54%), Gaps = 71/501 (14%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M A V N +TF L + C +R L + VH +IV+CGF D+ V+N+L+++Y CG+
Sbjct: 103 MRAAGVSPNGFTFTFLLRACESLRRLPLCRCVHGQIVRCGFGSDVVVQNALLNVYYKCGD 162
Query: 208 VLD---ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
D ARKVF+ D+V+WNS++ Y+ + + A ELF+ +PER++ +WN++++ +
Sbjct: 163 PGDVGVARKVFDGMADRDVVSWNSIVGVYMSSGDTTGAMELFEAIPERNVVSWNTIVAAF 222
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
GDM +A+ +FD MP RD +SWN MI GYA GNV SAR FD M ++VVSW +++
Sbjct: 223 TRAGDMVSAHAVFDRMPIRDAISWNLMISGYAGSGNVESARTLFDLMDRKDVVSWTAMVS 282
Query: 325 LYVRCKD-------------------------------YCECLRLFDRM-IRGDAKPNEA 352
Y + D Y E LR F +M + G P+EA
Sbjct: 283 AYAKIGDLDSARVLFDQMPDKNLVSWNAMITGYNHNSRYDEALRTFQQMMLEGRFMPDEA 342
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+SV++ACA +G ++ WI SYI K V L +L+ M+AKCG + AR FD M
Sbjct: 343 TLVSVVSACAQLGSVEYCNWISSYISKSNTHITVALGNALIDMFAKCGDVGRARLAFDKM 402
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+ V++W +MI G+ +GQ +AL ++ ++ + G T +D FI L+AC H G++ EGW
Sbjct: 403 KTRCVITWTTMISGFAYNGQFREALLIYSDICREGVTLDDTIFIAALAACAHGGLLQEGW 462
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M Y I P++EHYGC+VDLLGRA
Sbjct: 463 SIFKQMVEHYGIVPRMEHYGCIVDLLGRA------------------------------- 491
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
EL + V+ ++E+EP + VL+SN A EG+W V + R+ ++++ +EK GSS
Sbjct: 492 ----ELTEYVSARVVEIEPFNSSYQVLVSNCSALEGRWGSVMDARKTLRDRGVEKTPGSS 547
Query: 593 LVHPGEFASESIVENCPPHRK 613
L+ G E + ++ H+K
Sbjct: 548 LIQVGNEVHEFLAKD-TRHKK 567
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FD + + + N ++ + + AL + + M+ + T + CA +
Sbjct: 295 VLFDQMPDKNLVSWNAMITGYNHNSRYDEALRTFQQMMLEGRFMPDEATLVSVVSACAQL 354
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
S+ + + I K + + + N+LI M++ CG+V AR F+ ++TW +MI
Sbjct: 355 GSVEYCNWISSYISKSNTHITVALGNALIDMFAKCGDVGRARLAFDKMKTRCVITWTTMI 414
Query: 231 DGYVKN 236
G+ N
Sbjct: 415 SGFAYN 420
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 293/535 (54%), Gaps = 36/535 (6%)
Query: 54 VDLSHPILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
+ L+ P L+K+ + CST K ++ + L+QD ++ + CTS + L+V
Sbjct: 24 LSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITA-CTSFKCLDLAVST 82
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
+QEP+ F+ N + K F+ + P +L Y +M+ V + YT+ L K A +
Sbjct: 83 MTQMQEPNVFVYNALFKGFVTCSHPIRSLELYV-RMLRDSVSPSSYTYSSLVK--ASSFA 139
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
R G+ + A I K GF + ++ +LI YS G + +ARKV
Sbjct: 140 SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGGIREARKV------------------ 181
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
FD MPERD W +M+S Y V DM++AN L + M ++ + NC+I
Sbjct: 182 -------------FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 228
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+GY +GN+ A + F++M +++++SW ++ Y + K Y E + +F +M+ P+E
Sbjct: 229 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++ +V++ACA++GV++IG+ +H Y + DV + ++L+ MY+KCG ++ A VF N+
Sbjct: 289 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+KN+ WNS+I G HG ++AL+MF +ME PN TF+ V +ACTHAG+V EG
Sbjct: 349 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 408
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+ M Y I VEHYG MV L +AGL+ ++ EL+ + E +WGALL C
Sbjct: 409 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 468
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
H N + +I LM LEP + G Y LL ++YA + +W +V +R M+E +EK
Sbjct: 469 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 523
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/397 (40%), Positives = 246/397 (61%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ G + DA +F + P ++V++ +M+DG + EV ARE+FD MPER++
Sbjct: 105 NAMLAGLVRLGRMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLV 164
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W +MI+GYV+ + A LF+ MP ++VV+ MI GY K G+V SAR FD + +++
Sbjct: 165 SWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKD 224
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V+SWN ++ YV E ++L M R KP+ A+L+++LTAC+ + ++ G+ H+
Sbjct: 225 VISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRSTHA 284
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
K ++ +L+TMY+KCG + + VF N+ +++VSWN++I Y HG+ +K
Sbjct: 285 VATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKYQK 344
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ +F EME RG PND T + +LSAC H G V + FDLM Y I P EHY C+V
Sbjct: 345 AIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYACVV 404
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+LGRAG + + + K+P EA +WGALL A TH N +LG++ A+ L++ + G
Sbjct: 405 DILGRAGQLEKACSYIKKMPFEAERNVWGALLGASKTHGNVQLGELAAKMLVQSDSVSSG 464
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
PYV+LSNIYA+ G W EV +R MKEK ++K G S
Sbjct: 465 PYVMLSNIYAAAGMWGEVNRVRGQMKEKGVKKQPGYS 501
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDGI D N ++ ++ A+ + M + V+ +H T + C+ +
Sbjct: 216 LFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHI-IMFREGVKPDHATLIAILTACSALA 274
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
LR+G+ HA K E N+L+ MYS CG V ++ VF + + D+V+WN++I
Sbjct: 275 LLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIA 334
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
Y ++ + A LF M R + T SM+S VG + + LFDLM + +S
Sbjct: 335 AYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYAIS 394
Query: 288 -----WNCMIDGYAKIGNVTSARNCFDRM---CMRNVVSWNILLA 324
+ C++D + G + A + +M RNV W LL
Sbjct: 395 PSAEHYACVVDILGRAGQLEKACSYIKKMPFEAERNV--WGALLG 437
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 23/262 (8%)
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL-ALYVRCKDYCECLR 337
++ R +V N I A+ G+V +AR FD M R+VVSWN LL AL+ +D R
Sbjct: 1 MLATRLLVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARR 60
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LFD M N S SV+ C G +D +Y + + +V ++L
Sbjct: 61 LFDDM----PSRNVISWNSVVAGCLAHGDLDAAS---AYFARAP-RRNVASWNAMLAGLV 112
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
+ G MD A +F M ++NVVS+ +M+ G G+ +A E+F M P N ++
Sbjct: 113 RLGRMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAM----PERNLVSWAA 168
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG--RAGLMRDSEELVSKLP 515
+++ M FD +++++ P C + G + G + + L +P
Sbjct: 169 MITGYVENAM-------FDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIP 221
Query: 516 MEAGPALWGALLSACSTHSNSE 537
++ + W A+++ + + E
Sbjct: 222 VKDVIS-WNAMITGYVHNGHGE 242
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 201/610 (32%), Positives = 323/610 (52%), Gaps = 77/610 (12%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG--LSQDSFAASRVLKKLCTSLSSVSL 108
L + L H L+ C+++ IH+ L G L F A ++ L + L +
Sbjct: 19 LALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLII--LYSKLGDLHS 76
Query: 109 SVLFFDG--------IQEPDAFMCNTIMKSFLMLNDPFGALSFY-YEKMMAKFVEHNHYT 159
+ FD Q P++F+CNT+++++ + A+ Y Y + M V N++T
Sbjct: 77 ARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGV--NNFT 134
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+P + KVCA G+ VH ++V+ GF DLFV +L+
Sbjct: 135 YPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALV-------------------- 174
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
D Y K E+G A E+FD M RD+ W +MI+ Y +A L L
Sbjct: 175 -----------DMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY-----EQAERPLKAL 218
Query: 280 MPFR---------DVVSWNCMIDGYAKIGN----VTSARNCFDRMCMRNVVSWNILLALY 326
M FR D ++ + ++G+ ++ AR FDRM RN +SWN +L+ Y
Sbjct: 219 MLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGY 278
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ + L LF++M + PN + + +++AC+ +G +G+ +H+++ ++ D
Sbjct: 279 TQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDT 338
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
L +++ MY KCG +D A +F+N + E++V SWN +I GYG+HG G++ALE+F M+
Sbjct: 339 TLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQ 398
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
G PND TF +LSAC+HAG++ EG F M ++ + P+++HY CMVD+LGRAG +
Sbjct: 399 VEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFL 457
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ L+ K+P +WGALL AC H N+ELG+I A +L +LEP G YVL+SNIY
Sbjct: 458 NEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIY 517
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASE-----SIVENCPPHRKCIVYSM 619
A+ KW EVE +R+ MK + L+K S++ EF +E + ++ P +R+ VY
Sbjct: 518 AASNKWKEVEMVRQNMKSRGLKKPAAFSVI---EFGTEVHGFHTADQSSPYYRE--VYRK 572
Query: 620 LGEIGAQMKM 629
+ + +MKM
Sbjct: 573 VESLAIEMKM 582
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 303/578 (52%), Gaps = 54/578 (9%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAA-SRVLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
L +CS++ + +IH ++ SGL DSF + + L + SV + F +Q D
Sbjct: 117 LGACSSLAQGREIHNRVFYSGL--DSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET 174
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS---LREGKKV 179
N ++ + D GAL + E M V+ N T+ V +G + L EG+K+
Sbjct: 175 SWNAVILAHSQSGDWSGALRIFKE--MKCDVKPNSTTYI---NVISGFSTPEVLPEGRKI 229
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA IV GF+ DL V +LI+MY CG +AR+VF+ D+V+WN MI YV N +
Sbjct: 230 HAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDF 289
Query: 240 -------------GFARELFDFMP--------------------------ERDIFTWNSM 260
GF R F+ + ++ ++
Sbjct: 290 HEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATAL 349
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG---NVTSARNCFDRMCMRNVV 317
++ Y G +E A +F+ M RD V+W+ +I YA G + AR FDR+ R+ +
Sbjct: 350 VNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSY 376
SWN ++ YV+ +++F M KP+ + ++VL ACA++G + + +H+
Sbjct: 410 SWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I + ++ +V+++ +L+ MYA+CG ++ A +F EK VVSW +M+ + +G+ +A
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L++F EM+ G P+D T+ +L CTH G + +GW YF M ++ + P +H+ MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVD 589
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGR+G + D++EL+ +P E P W L+AC H ELG+ A+ + EL+P P
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
Y+ +SNIYA+ G W++V ++R+ M+E+ L+K G S +
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFI 687
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 227/464 (48%), Gaps = 24/464 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
++ TF + C+ + EG+ +H RI FE D V N+LI MY C ++DAR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 216 E--DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGD 269
E D ++V+WN+MI Y +N A L+ M + D T+ S++ +
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ 125
Query: 270 -MEAANGLF--DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALY 326
E N +F L F+ + N ++ YA+ G+V A+ F + R+ SWN ++ +
Sbjct: 126 GREIHNRVFYSGLDSFQSLA--NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ D+ LR+F M + D KPN + ++V++ + V+ G+ IH+ I D+
Sbjct: 184 SQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDL 242
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
+++T+L+ MY KCG AR VFD M ++++VSWN MI Y ++G +ALE++ +++
Sbjct: 243 VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDME 302
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWW-YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G ATF+ +L AC+ + +G + +++R ++ +V +V++ + G +
Sbjct: 303 GFKRTKATFVSILGACSSVKALAQGRLVHSHILER--GLDSEVAVATALVNMYAKCGSLE 360
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ ++ + + A W L+ A +++ + + + L RD + + Y
Sbjct: 361 EARKVFNAMKNRDAVA-WSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTY- 418
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCP 609
V+N + K + G++ + P +++E C
Sbjct: 419 -------VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACA 455
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 249/525 (47%), Gaps = 65/525 (12%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQ 117
+L SC V E +H ++ S +D+ + ++ C SL + SV +
Sbjct: 13 VLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD-ARSVFESMDWR 71
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ + N ++ ++ AL Y+ +M + + +H TF + C+ SL +G+
Sbjct: 72 QRNVVSWNAMIAAYAQNGHSTEALVLYW-RMNLQGLGTDHVTFVSVLGACS---SLAQGR 127
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H R+ G + + N+L+ MY+ G V DA+++F+ D +WN++I + ++
Sbjct: 128 EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 238 EVGFARELFDFMP---ERDIFTWNSMISGYV---------DVGDMEAANGLFDLMPFRDV 285
+ A +F M + + T+ ++ISG+ + ANG FD D+
Sbjct: 188 DWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG-FDT----DL 242
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
V +I+ Y K G+ AR FD+M R++VSWN+++ YV D+ E L L+ ++
Sbjct: 243 VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDME 302
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
K +A+ +S+L AC+++ + G+ +HS+I + + +V ++T+L+ MYAKCG ++ A
Sbjct: 303 GFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEA 362
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGE------------------------------- 434
R VF+ M ++ V+W+++I Y +G G+
Sbjct: 363 RKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNG 422
Query: 435 ---KALEMFMEME-KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI--YKIEPKV 488
A+++F EM G P+ TFI VL AC G + E L +I ++E V
Sbjct: 423 CAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE---VKALHAQISESELESNV 479
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
++++ R G + ++E L + E W A+++A S +
Sbjct: 480 VVTNTLINMYARCGSLEEAERLFAA-AKEKTVVSWTAMVAAFSQY 523
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
D +P+ + ++VL +C++ G + G+ +H I+ R + D ++ +L++MY KC + A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 406 RNVFDNM--TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
R+VF++M ++NVVSWN+MI Y +G +AL ++ M +G + TF+ VL AC+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 306/586 (52%), Gaps = 48/586 (8%)
Query: 23 SQKNLP---KTPPKLWA-----NEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFH 74
S N P PP++ +E KPK + + P + + T+ + H
Sbjct: 39 SSSNAPIPSPNPPEITTTISKTSENKPKSSLSALFIPPTTPTEAHFISLIHGSKTILQLH 98
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
QIH Q+++ LS S ++++ +SL S++ S+ F+ + + F N +++ L
Sbjct: 99 QIHAQIIIHNLSSSSLITTQLISS--SSLRKSINHSLAVFNHHKPKNLFTFNALIRG-LT 155
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
N F F++ M+ ++ + T+P + K AG+ S G +H I++CG ELD F
Sbjct: 156 TNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSF 215
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER- 252
VR SL+ MY VK ++G A ++FD PER
Sbjct: 216 VRVSLVDMY-------------------------------VKVEKLGSAFKVFDESPERF 244
Query: 253 ----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
WN +I G G M+ A LF MP ++ VSW+ +IDG+AK G++ A F
Sbjct: 245 DSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELF 304
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D+M +NVVSW ++ + R D + L +F +M+ +PN +++S L+ACA +G ++
Sbjct: 305 DQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLE 364
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G IH YI+ + L T+L+ MYAKCG ++ A VF +K++ +W MI G+
Sbjct: 365 AGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWA 424
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
+HG E+A+ F +M G P++ F+ +L+AC H+G V G +FD M+ Y IEP +
Sbjct: 425 IHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSM 484
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY +VD+LGR+G ++++ + ++PM +WGAL AC H +++ K L++
Sbjct: 485 KHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLK 544
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
LEP G Y+ LSN YA+ G+W++ E +R +M+ + + K G S +
Sbjct: 545 LEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCI 590
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 319/577 (55%), Gaps = 17/577 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C T+ + +IH + G D F A+ ++ + + V ++ FD + D
Sbjct: 182 LKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIH-MYSRFGFVGIARSLFDDMPFRDMGS 240
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + AL ++M + + + T + VCA + + +H +
Sbjct: 241 WNAMISGLIQNGNAAQALDVL-DEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYV 299
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E +LFV N+LI+MY+ G + DA+KVF+ + D+V+WNS+I Y +N + AR
Sbjct: 300 IKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTAR 359
Query: 244 ELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD-----VVSWNCMIDG 294
F M E D+ T S+ S D + + + + R VV N ++D
Sbjct: 360 GFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDM 419
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG--DAKPNEA 352
YAK+G + SA F+ + +++VVSWN L++ Y + E + ++ RM+ + K N+
Sbjct: 420 YAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVY-RMMEECREIKLNQG 478
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +S+L A A++G + G IH ++ K + DV + T L+ +Y KCG + A +F +
Sbjct: 479 TWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQV 538
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++ V WN++I +G+HG GEKAL++F EM+ G P+ TFI +LSAC+H+G+V EG
Sbjct: 539 PRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGK 598
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
W+F LMQ Y I+P ++HYGCMVDLLGRAG + + + + +P+ ++WGALL AC
Sbjct: 599 WFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRI 657
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N ELGK + L E++ + G YVLLSNIYA+ GKW+ V+ +R + +E+ L+K G S
Sbjct: 658 HGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 717
Query: 593 LVHPGEFASESIVENCPPHRKCI-VYSMLGEIGAQMK 628
+ N H KC +Y+ L + A+MK
Sbjct: 718 SIEVNRRVDIFYTGN-QSHPKCKEIYAELRILTAKMK 753
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 272/528 (51%), Gaps = 32/528 (6%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+SC+ ++H L+VSG Q +F + R L L SL VSLS FD IQ D +
Sbjct: 83 FDSCTKTLLAKRLHALLVVSGKIQSNFISIR-LVNLYASLGDVSLSRGTFDQIQRKDVYT 141
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N+++ +++ A+ +Y+ ++ + + YTFP + K C ++L +G+K+H +
Sbjct: 142 WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWV 198
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
K GF+ D+FV SLIHMYS G V AR +F+D P D+ +WN+MI G ++N A
Sbjct: 199 FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 258
Query: 244 ELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDL------MPFRDVVSWNCMID 293
++ D M D T S++ +GD+ A L L + F VS N +I+
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTAT-LIHLYVIKHGLEFELFVS-NALIN 316
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
YAK GN+ A+ F +M +R+VVSWN ++A Y + D F +M +P+ +
Sbjct: 317 MYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT 376
Query: 354 LMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
L+S+ + A + +H +I ++ + V++ +++ MYAK GV+D A VF+ +
Sbjct: 377 LVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLI 436
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEG 471
K+VVSWN++I GY +G +A+E++ ME+ R N T++ +L+A H G + +G
Sbjct: 437 PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQG 496
Query: 472 WWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ + K ++ + C++DL G+ G + D+ L ++P E+ W A++S
Sbjct: 497 ---MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVP-WNAIISC 552
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA-------SEGKW 570
H + E + + M+ E P +S + A EGKW
Sbjct: 553 HGIHGHGEKALKLFRE-MQDEGVKPDHVTFISLLSACSHSGLVDEGKW 599
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 307/580 (52%), Gaps = 69/580 (11%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
I L+SC + + + H Q++VSG SQ ++ + +L L S S+ + F+ I P
Sbjct: 30 IFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLS-LYISFGSLGSAQKVFEDITAP 88
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N I+K ++ + ++M VE N +T+ L C R REG+++
Sbjct: 89 STTVWNQIIKGHTRSKTSKKSIELF-KRMTLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H R++ G+ +L+VR +LI++Y+ G DG +DL
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYANGG----------DGGDFDLKR-------------- 183
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
A LFD MP+ ++ WNS+++GYV GD + A +FD MP R+V +W M+ G+A+ G
Sbjct: 184 --ALYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNG 241
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+CK L LFD+M R + ++ +L++ L+
Sbjct: 242 ----------------------------QCK---LALSLFDQMRRAGVELDQVALVAALS 270
Query: 360 ACANMGVIDIGQWIHSYIQKC----RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
ACA +G + +G+WIH Y+++ + V L+ +L+ MYA CG MDLA +F+ + ++
Sbjct: 271 ACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQR 330
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT---PNDATFICVLSACTHAGMVLEGW 472
N VSW+S+I G+ G G +A+ +F M G P++ TFI L+AC+HAG++ +G
Sbjct: 331 NTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGI 390
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M + + + P++EHYGCMVDLL RAGL+ ++ L+ +PM+ A+WGALLS C
Sbjct: 391 RLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRL 450
Query: 533 HSNSELGKIVAQHL-MELEPRD--PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
H N E+ VA+HL E++P + G ++LL+N+YA++G+W + +RR M + ++K
Sbjct: 451 HKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPS 510
Query: 590 GSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
G S + +V ++Y MLG I Q +M
Sbjct: 511 GRSWIEINGVLCSFMVGEETHKDVNLIYEMLGNITRQTQM 550
>gi|217074958|gb|ACJ85839.1| unknown [Medicago truncatula]
gi|388521431|gb|AFK48777.1| unknown [Medicago truncatula]
Length = 515
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 269/463 (58%), Gaps = 17/463 (3%)
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+M++ HNHYTF K C + +G ++HAR++K G D F++N+L++ Y
Sbjct: 47 NQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSS 106
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMI 261
+V+ A +VF+ P D+V+W S+I G K GF E + ++ T S I
Sbjct: 107 NDVVSATRVFKSIPSPDVVSWTSLISGLSK---CGFETEAIEAFSSINVKPNALTLVSAI 163
Query: 262 S-----GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
S G + G A GL LM ++V +N +D YAK G ++ARN F +M R+V
Sbjct: 164 SACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDV 223
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+SW LL Y R E + +F +MI G+A+PNE+++++VL+ACA++G + +G W+H
Sbjct: 224 ISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHD 283
Query: 376 YIQKCRIKPDV--LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
YI+K RI DV + +L+ MY KCG M + VF+ + K+V+SW ++I G M+ G
Sbjct: 284 YIEK-RIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNEYG 342
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
++ ++MF M G P+D TFI +LSAC+H G+V EG +F M+ Y I P++ HYGC
Sbjct: 343 KQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGC 402
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVD+ GRA L ++ + +P+EA +W ALL AC TH N E+ + + + + +
Sbjct: 403 MVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQIHD-KNVG 461
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
G LLSNIYAS +WD+ N+R+IM+ L+K G S V P
Sbjct: 462 VGTLALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVEP 504
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 163/373 (43%), Gaps = 18/373 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH +L+ SG D F + +L +S VS + + F I PD +++
Sbjct: 79 EIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRV-FKSIPSPDVVSWTSLISGL--- 134
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC-GFELDLF 193
G + E + V+ N T C+ I +++ GK +HA +K + ++
Sbjct: 135 -SKCGFETEAIEAFSSINVKPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIV 193
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM---- 249
N+ + +Y+ CG +AR VF D+++W +++ Y + + G A E+F M
Sbjct: 194 FYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSG 253
Query: 250 -PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTS 303
E + T +++S +G + + D + R D N +++ Y K G++
Sbjct: 254 EAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKM 313
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
F+ + ++V+SW ++ + + +++F M+ P++ + + +L+AC++
Sbjct: 314 GLKVFNMVVHKDVISWGTVICGLAMNEYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSH 373
Query: 364 MGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWN 421
+G++ G ++ I P + ++ MY + + + A M E W+
Sbjct: 374 VGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWS 433
Query: 422 SMIMGYGMHGQGE 434
+++ HG E
Sbjct: 434 ALLQACKTHGNEE 446
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 275/535 (51%), Gaps = 64/535 (11%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L L+ C T E QIH ++L SGL QD +A ++ L +S S +FF+G PD
Sbjct: 15 LSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPD 74
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F+ N +++ + P +L Y+ +M+ HN YTFP
Sbjct: 75 TFLWNLMIRGLSCSDQPDRSLLLYH-RMLCCSAPHNAYTFPF------------------ 115
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
++K L F + IH +
Sbjct: 116 --LLKACSNLSAFQETTQIHAH-------------------------------------- 135
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
+ F DI+ NS+I+ Y G+ + A+ LFD + D VSWN +I GY K G
Sbjct: 136 ----ITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGE 191
Query: 301 VTSARNCFDRMCMRN-VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ A F +M +N +SW +++ YV+ E L+LF M + P+ SL S L+
Sbjct: 192 MDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALS 251
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
AC+ +G ++ G+WIHSY K R + D +L L+ MYAKCG M+ A VF NM K+V
Sbjct: 252 ACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQV 311
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W ++I GY HG G +A+ F+EM+ G PN TF VL+AC++ G+V EG F+ ++
Sbjct: 312 WTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIE 371
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
R Y ++P +EHYGCMVDLLGRAGL+ ++ + K+P++ +WG+LL AC H N ELG
Sbjct: 372 RDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELG 431
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ + + L+E++ G YV ++NI+A KWD+ RR+M+E+ + K G S +
Sbjct: 432 EKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAI 486
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ + S +E QIH + G D +A + ++ + + + L FD IQEP
Sbjct: 116 LLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVT-GNFKHAHLLFDRIQEP 174
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFY-----------YEKMMAKFVEH--NHYTFPLLGKV 166
DA N+++K ++ + AL+ + + M++ +V+ N L ++
Sbjct: 175 DAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEM 234
Query: 167 ------------------CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
C+ + +L +GK +H+ K +D + LI MY+ CGE+
Sbjct: 235 QNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEM 294
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE-LFDFMPERDI------FTWNSMI 261
+A VF++ + W ++I GY + G RE + F+ +++ T+ +++
Sbjct: 295 EEALGVFKNMKTKSVQVWTALISGYAYH---GLGREAISKFLEMQNMGVKPNAITFTAVL 351
Query: 262 SGYVDVGDMEAANGLFDLMPFRD------VVSWNCMIDGYAKIGNVTSARNCFDRMCMR- 314
+ G +E +F+ + RD + + CM+D + G + A +M ++
Sbjct: 352 TACSYTGLVEEGKSVFNTIE-RDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKP 410
Query: 315 NVVSWNILL 323
N V W LL
Sbjct: 411 NAVIWGSLL 419
>gi|224103137|ref|XP_002312939.1| predicted protein [Populus trichocarpa]
gi|222849347|gb|EEE86894.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/503 (37%), Positives = 279/503 (55%), Gaps = 32/503 (6%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F + E D N I+ FL D A+ Y+E+M + L + +G+
Sbjct: 116 FKLMPEGDVVSWNAIVTGFLQNGDVARAIE-YFERMPERDAAS-------LSALVSGL-- 165
Query: 173 LREGKKVHARIVKCGFELD-------LFVRNSLIHMYSVCGEVLDARKVFEDGP------ 219
+R G+ A V FE D L N+LI Y V +ARK+F+ P
Sbjct: 166 IRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKG 225
Query: 220 -------VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEA 272
++V+WN+MI YVK + FARELFD M ERD +WN+MISGYV++ DM+
Sbjct: 226 KGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISWNTMISGYVNMLDMDE 285
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A+ LF MP D+ SWN MI G+A+IG++ + F RM +N+VSWN ++ Y + DY
Sbjct: 286 ASRLFCEMPNPDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDY 345
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
+++F +M KP+ +L SVL+ A + + +G IH + K I PDV ++ +L
Sbjct: 346 IGAIKIFIQMQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVI-PDVPINNAL 404
Query: 393 LTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
+TMY++CG + A +FD + +K V+SWN+MI GY HG +ALE+F M+ P
Sbjct: 405 ITMYSRCGAIIEAGTIFDEVKLQKEVISWNAMIGGYASHGYAVEALEVFKLMKSFDVRPT 464
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
TFI VL AC HAG+V EG F+ M + IEP VEHY +VD++ R G + + +L+
Sbjct: 465 HITFISVLHACAHAGLVEEGREIFESMADEFGIEPSVEHYASLVDIMSRHGQLEQALDLI 524
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+ +P E A+WGALLSA H+ E+ ++ A+ L+ LEP PYVLL N+YA G+WD
Sbjct: 525 NSMPFEPDKAVWGALLSAAKVHNKIEVARVAAEALIRLEPDSSAPYVLLYNMYADVGQWD 584
Query: 572 EVENLRRIMKEKELEKAVGSSLV 594
+R +M+ ++K S V
Sbjct: 585 SAAEVRIMMERSNIKKQAAYSWV 607
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 142/271 (52%), Gaps = 20/271 (7%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF---ARELFDFMPER 252
N++I Y E+ ARK+F++ P D+V+WN MI GYV + F R LFD MPER
Sbjct: 32 NAIIRAYVKRREIAKARKLFDEMPQRDIVSWNLMISGYVSCHGIRFLKEGRNLFDRMPER 91
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
DI +WN+MISGY G M+ A +F LMP DVVSWN ++ G+ + G+V A F+RM
Sbjct: 92 DIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGDVARAIEYFERMP 151
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG---VIDI 369
R+ S + L++ +R + E R+ R R D E L + T A G +D
Sbjct: 152 ERDAASLSALVSGLIRNGELDEAARVVVRFER-DGGRKENLLQAYNTLIAGYGRRDRVDE 210
Query: 370 GQWIHSYIQKC---------RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
+ + I C R +V+ +++ Y K G + AR +FD M E++ +SW
Sbjct: 211 ARKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISW 270
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
N+MI GY ++A +F EM P P+
Sbjct: 271 NTMISGYVNMLDMDEASRLFCEM----PNPD 297
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 142/269 (52%), Gaps = 22/269 (8%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N I + G + +AR +F+ + V+WN++I YVK RE+ AR+LFD MP+RDI
Sbjct: 1 NKKISNLAKNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIV 60
Query: 256 TWNSMISGYVD---VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+WN MISGYV + ++ LFD MP RD+VSWN MI GYAK G + A F M
Sbjct: 61 SWNLMISGYVSCHGIRFLKEGRNLFDRMPERDIVSWNTMISGYAKNGRMDEALRMFKLMP 120
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
+VVSWN ++ +++ D + F+RM DA ASL ++++ G +D
Sbjct: 121 EGDVVSWNAIVTGFLQNGDVARAIEYFERMPERDA----ASLSALVSGLIRNGELDEAAR 176
Query: 373 IHSYIQKCRIKPDVLLS--TSLLTMYAKCGVMDLARNVFDNM-------------TEKNV 417
+ ++ + + LL +L+ Y + +D AR +FD + +NV
Sbjct: 177 VVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKGKGGDGRFGRNV 236
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
VSWN+MIM Y G A E+F +M +R
Sbjct: 237 VSWNTMIMCYVKAGNIVFARELFDQMMER 265
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 10/180 (5%)
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
++ AK G +D AR +FD M E N VSWN++I Y + KA ++F EM +R +
Sbjct: 4 ISNLAKNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIVSWN 63
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
I +C + EG FD M E + + M+ + G M ++ +
Sbjct: 64 -LMISGYVSCHGIRFLKEGRNLFDRMP-----ERDIVSWNTMISGYAKNGRMDEALRMFK 117
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
+P E W A+++ N ++ + + ++ + RD L + G+ DE
Sbjct: 118 LMP-EGDVVSWNAIVTGFL--QNGDVARAI-EYFERMPERDAASLSALVSGLIRNGELDE 173
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 275/462 (59%), Gaps = 41/462 (8%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD-ARKVFEDGPVWDLVTWNSMI 230
+L K +HA +++ D+F + LI + S+ +LD A +VF +L +NS I
Sbjct: 27 TLSHLKIIHAHLIRAHTIFDVFAASCLISI-SINKNLLDYAAQVFYQIQNPNLFIYNSFI 85
Query: 231 DG-------------YVKNREVGFARE--LFDFMP------------------------E 251
G YV+++ G + + F+ +
Sbjct: 86 RGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFD 145
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
D++ NS+++ Y +GD+++A+ +F + DVVSW M+ GY K G+VTSAR FD+M
Sbjct: 146 SDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKM 205
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
+N+V+W+++++ Y + + + + L+ + NE ++SV+ +CA++G +++G+
Sbjct: 206 PEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGE 265
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
H YI + ++ +++L T+L+ MYA+CG +D A VFD + ++ +SW ++I G+ MHG
Sbjct: 266 RAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHG 325
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
EKALE F MEK G TP + TF VLSAC+H G+V G F+ M+R Y+IEP++EHY
Sbjct: 326 YAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHY 385
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCMVDLLGRAG + ++E+ V+++PM+ +WGALL AC H NSE+ + + L+EL+P
Sbjct: 386 GCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKP 445
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
G YVLLSNIYA KW+ VEN+R++MKE+ + K G +L
Sbjct: 446 EHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTL 487
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 215/459 (46%), Gaps = 55/459 (11%)
Query: 48 NQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS 107
N L ++L +P L LESC+T+ IH L+ + D FAAS L + + + +
Sbjct: 6 NLVLRKLELKNPKLSFLESCTTLSHLKIIHAHLIRAHTIFDVFAAS-CLISISINKNLLD 64
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
+ F IQ P+ F+ N+ ++ F DP + FY + V N T+P L K C
Sbjct: 65 YAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDN-LTYPFLVKAC 123
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
SL G + H +I++ GF+ D++V+NSL+ MYS G++ A VF D+V+W
Sbjct: 124 TQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWT 183
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------ 281
SM+ GY+K+ +V AR+LFD MPE+++ TW+ MISGY + A L+ L+
Sbjct: 184 SMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHA 243
Query: 282 ----------------------------FRDVVSWN-----CMIDGYAKIGNVTSARNCF 308
R+ ++ N ++D YA+ G++ A F
Sbjct: 244 NETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVF 303
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D++ R+ +SW L+A + + L F RM + P E + +VL+AC++ G+++
Sbjct: 304 DQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVE 363
Query: 369 IG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMG 426
G + S + RI+P + ++ + + G + A + M K N W +++
Sbjct: 364 RGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGA 423
Query: 427 YGMHGQGEKALEMFMEMEKRGPT-----PNDATFICVLS 460
+H E A E+ G T P + + +LS
Sbjct: 424 CRIHKNSEIA-------ERAGKTLIELKPEHSGYYVLLS 455
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 305/548 (55%), Gaps = 44/548 (8%)
Query: 63 KLESCSTVKEFHQ--IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+++S S K+ H I TQ L S ++ ++ + T+L + ++L F ++ P
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSL-------SHTSASIVISIYTNLKLLHEALLVFKTLESPP 69
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-------NHYTFPLLGKVCAGIRSL 173
++++ F + + + +A FVE +H FP + K C + L
Sbjct: 70 VLAWKSVIRCFTDQS--------LFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
R G+ VH IV+ G + DL+ N+L++MYS + RKVFE P D+V++N++I GY
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGY 181
Query: 234 VKN----------REVGFARELFDFMPERDIFTWNSMI---SGYVDVGDMEAANGLFDLM 280
++ RE+G + D P D FT +S++ S YVDV + +G
Sbjct: 182 AQSGMYEDALRMVREMGTS----DLKP--DAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK 235
Query: 281 PF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
DV + ++D YAK + + F + R+ +SWN L+A YV+ Y E LRLF
Sbjct: 236 GIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLF 295
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+M+ +P + SV+ ACA++ + +G+ +H Y+ + ++ ++++L+ MY+KC
Sbjct: 296 RQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKC 355
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + AR +FD M + VSW ++IMG+ +HG G +A+ +F EM+++G PN F+ VL
Sbjct: 356 GNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 415
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
+AC+H G+V E W YF+ M ++Y + ++EHY + DLLGRAG + ++ + +SK+ +E
Sbjct: 416 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPT 475
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
++W LLS+CS H N EL + VA+ + ++ + G YVL+ N+YAS G+W E+ LR
Sbjct: 476 GSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLR 535
Query: 580 MKEKELEK 587
+++K L K
Sbjct: 536 VRKKGLRK 543
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 307/575 (53%), Gaps = 76/575 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS----SVSLSVLFFDGIQEP 119
LE C ++K Q H Q+ +GL ++FA SRVL C+S S++ + F+ IQ P
Sbjct: 12 LEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLA-FCSSHKHHHESLTYACRVFEQIQNP 70
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ NT++K+FL +N+ F + + KM+ ++ ++YT P + K C
Sbjct: 71 TVCIYNTLIKAFL-VNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACG----------- 118
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
F D ++ MI GY +
Sbjct: 119 ----------------------------------TFHD------CSFGKMIHGYSSKLGL 138
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
F DI+ NS+++ Y GD+ AA +FD +P +VVSW+ MI GYAK+G
Sbjct: 139 VF-----------DIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVG 187
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+V SAR FD ++ W +++ YV+ + E L LF M D P+E+ +S+L+
Sbjct: 188 DVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILS 247
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKP-DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
ACA++G ++IG WIH ++ + ++ P V LSTSLL MYAKCG ++LA+ +FD+M ++VV
Sbjct: 248 ACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVV 307
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
WN+MI G MHG G+ AL++F +MEK G P+D TFI V +AC+++GM EG D M
Sbjct: 308 CWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKM 367
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA----LWGALLSACSTHS 534
+Y I PK EHYGC+VDLL RAGL ++ ++ K+ + W A LSAC H
Sbjct: 368 CSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHG 427
Query: 535 NSELGKIVAQHLMELEPR-DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
++L ++ A+ +++L+ G YVLLSN+YA+ GK + +R +MK K KA G S
Sbjct: 428 ETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSS 487
Query: 594 VHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQM 627
V SE I E P + I +S+L ++ Q+
Sbjct: 488 VEIDGVISEFIAGEKTHPQMEEI-HSVLKKMHMQL 521
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 196/682 (28%), Positives = 326/682 (47%), Gaps = 114/682 (16%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+++ LE+C + Q+H+Q L GL+ DSF ++ L L +S+ + F+
Sbjct: 7 LVKLLETCCSKISIPQLHSQCLKVGLAHDSFVVTK-LNVLYARYASLCHAHKLFEETPCK 65
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH--NHYTFPLLGKVCAGIRSLREGK 177
++ N +++S+ + LS +++ E ++YT + K C+G++ L GK
Sbjct: 66 TVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGK 125
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN- 236
+H + K + D+FV ++LI +YS CG++ DA KVF + P D+V W S+I GY +N
Sbjct: 126 MIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNG 185
Query: 237 -----------------------------------REVGFARELFDFMPERDIFT----W 257
+ R + F+ R T
Sbjct: 186 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 245
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR--- 314
NS+++ Y G + +A LF MP++D++SW+ M+ YA G T+A N F+ M +
Sbjct: 246 NSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 305
Query: 315 ------------------------------------NVVSWNILLALYVRCKDYCECLRL 338
++ L+ +Y++C + L
Sbjct: 306 LNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDL 365
Query: 339 FDRMIRGD-------------------------------AKPNEASLMSVLTACANMGVI 367
F+RM + D +P+ +L+ +L A + +G++
Sbjct: 366 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIV 425
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+H+++ K + + SL+ +YAKC +D A VF M K+VV+W+S+I Y
Sbjct: 426 QQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAY 485
Query: 428 GMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
G HGQGE+AL++F +M PND TF+ +LSAC+HAG++ EG F +M Y++ P
Sbjct: 486 GFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMP 545
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
EHYG MVDLLGR G + + ++++++PM+AGP +WGALL AC H N ++G++ A +L
Sbjct: 546 NTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNL 605
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
L+P G Y LLSNIY + W + LR ++KE +K VG S+V I
Sbjct: 606 FLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIAS 665
Query: 607 NCPPHRKCIVYSMLGEIGAQMK 628
+ +Y ML ++ A+MK
Sbjct: 666 DRFHGESDQIYGMLRKLDARMK 687
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 259/466 (55%), Gaps = 31/466 (6%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ Y+ G V DA +F+ PV D +WN ++ V++ + AR+LFD MPER++
Sbjct: 133 NTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVM 192
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
W +M++G G ++ A LFD MP R+VVSWN MI GYA+ + A + F +M R+
Sbjct: 193 AWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRD 252
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDA---------------------------- 347
+ SWNI++ +++ +D LFD+M R +
Sbjct: 253 IASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLV 312
Query: 348 ---KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+PN+ + + + AC+N+ + GQ +H I K + D + ++L+ +YAKCG + L
Sbjct: 313 EGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRL 372
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR VFD EK+V+SWN MI Y HG G +A+ ++ +M+++G PND T++ +LSAC+H
Sbjct: 373 ARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSH 432
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
+G+V EG F+ M + I + EHY C++DL RAG + D++ L+ L +E +W
Sbjct: 433 SGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWN 492
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
ALL C++H N +G + A++L+E EP + G Y LL NIYAS GKW E +R M ++
Sbjct: 493 ALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRG 552
Query: 585 LEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC 630
L+K G S + + + ++ S+L +I M+M
Sbjct: 553 LKKQPGCSWIEVENKVHVFVSRDKSHSESDLINSLLQDIHDIMRMA 598
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 181/368 (49%), Gaps = 38/368 (10%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE--RD 253
N + + G V DAR++F+ P D+V+W +++ Y + + AR LFD P+ R+
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFD-RPDARRN 97
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+ TW +++SGY G ++ A LF MP R+VVSWN M++ Y G V A FD M +
Sbjct: 98 VVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPV 157
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID----- 368
R+ SWNILLA VR + + +LFDRM + N + +++ A G +D
Sbjct: 158 RDAGSWNILLAALVRSGNMDKARKLFDRM----PERNVMAWTTMVAGIARSGSVDEARAL 213
Query: 369 --------IGQW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLAR 406
+ W I Y + RI D+ ++T + + ++ A+
Sbjct: 214 FDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQ 273
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
++FD M +NV++W +M+ GY Q E AL++F M G PN TF+ + AC++
Sbjct: 274 DLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLA 333
Query: 467 MVLEGWWYFDLM-QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
+ EG ++ + ++ + +E +++L + G +R + + V L E W
Sbjct: 334 GLSEGQQVHQMICKTSFQFDTFIE--STLMNLYAKCGEIRLARK-VFDLSKEKDVISWNG 390
Query: 526 LLSACSTH 533
+++A + H
Sbjct: 391 MIAAYAHH 398
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + T+M +L AL + M+ + + N TF C+ +
Sbjct: 275 LFDKMPRRNVITWTTMMNGYLQSMQSETALQIF-NGMLVEGIRPNQVTFLGAVDACSNLA 333
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L EG++VH I K F+ D F+ ++L+++Y+ CGE+ ARKVF+ D+++WN MI
Sbjct: 334 GLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIA 393
Query: 232 GYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLM------P 281
Y + A L++ M E+ + T+ ++S G ++ +F+ M
Sbjct: 394 AYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIA 453
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
RD + C+ID ++ G + A+ + + + WN LL
Sbjct: 454 VRD-EHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLG 496
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 321/597 (53%), Gaps = 23/597 (3%)
Query: 43 FTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS 102
F +D+ P P+++ +C + + ++H +L G D + A+ + +
Sbjct: 137 FLQSDHYTFP------PVIR---ACGNLDDGRKVHCLVLKLGFECDVYIAASFIH-FYSR 186
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
VSL+ FD + D N ++ F + AL + ++M K V + T
Sbjct: 187 FGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVF-DEMRFKSVSMDSVTISS 245
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L +C + + G +H +K G E DLFV N+LI+MY+ GE+ A +F V D
Sbjct: 246 LLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRD 305
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPE----RDIFTWNSMISGYVDVGDMEAANGLFD 278
+V+WNS++ + +N++ A +++ M D+ T S+ S ++G+ ++ +
Sbjct: 306 IVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHG 365
Query: 279 LMPFR-----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
+ R D+ N +ID YAK+G + SAR F+ + +++V+SWN L+ Y +
Sbjct: 366 FVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLAN 425
Query: 334 ECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
E + ++ M A PN+ + +S+LTA + +G + G H + K + D+ +ST L
Sbjct: 426 EAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCL 485
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ MY KCG + A ++F + ++ VSWN++I +G+HG G KA+++F EM+ G P+
Sbjct: 486 VDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDH 545
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF+ +LSAC+H+G+V EG W F LMQ Y I P ++HYGCMVDL GRAG + + V
Sbjct: 546 ITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVK 605
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
+P+ ++WGALL AC H N EL + V+ HL+++E + G YVLLSNIYA G W+
Sbjct: 606 NMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEG 665
Query: 573 VENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC-IVYSMLGEIGAQMK 628
V+ +R + +++ L+K G S + + N H KC +YS L + A+MK
Sbjct: 666 VDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGN-QTHPKCEEIYSELRNLTAKMK 721
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 163/589 (27%), Positives = 295/589 (50%), Gaps = 52/589 (8%)
Query: 34 LWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAAS 93
L++ PK+ D +D + L C+ V Q+H L+VSG +Q F ++
Sbjct: 24 LYSATAAPKYLDGVENEKREIDFNRIFLY----CTKVHLAKQLHALLVVSGKTQSIFLSA 79
Query: 94 RVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
+++ + L + + L FD IQ D + N+++ ++ + A+ + E + F+
Sbjct: 80 KLINRYAF-LGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFL 138
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ +HYTFP + + C +L +G+KVH ++K GFE D+++ S IH YS G V A
Sbjct: 139 QSDHYTFPPVIRACG---NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACN 195
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGD 269
+F++ + D+ TWN+MI G+ N +V A E+FD M + D T +S++ V + D
Sbjct: 196 LFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDD 255
Query: 270 MEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ + L + + D+ N +I+ YAK G + SA F++M +R++VSWN LLA
Sbjct: 256 I-ISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLA 314
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIK 383
+ + K L ++++M P+ +L+S+ + A +G + IH ++ ++C
Sbjct: 315 AFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFL 374
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
D+ L +++ MYAK G +D AR VF+ + K+V+SWNS+I GY +G +A++++ M
Sbjct: 375 HDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSM 434
Query: 444 E-KRGPTPNDATFICVLSACTHAGMVLEG----------WWYFDLMQRIYKIEPKVEHYG 492
G PN T++ +L+A + G + +G + YFD+
Sbjct: 435 RYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVST----------- 483
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VD+ G+ G + D+ L ++P ++ + W A++S H G + E++
Sbjct: 484 CLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIISCHGLHG---YGLKAVKLFKEMQSE 539
Query: 553 DPGP----YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
P +V L + + G DE + ++M+E + SL H G
Sbjct: 540 GVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQET---YGIRPSLKHYG 585
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 292/530 (55%), Gaps = 41/530 (7%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L + ++ +F+ + E D N ++ + AL E M K V + T+
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE-MHRKGVRLDSTTYTS 275
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
CA + SL GK++HA++++ ++D +V ++LI +Y+ CG +A++VF +
Sbjct: 276 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 335
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM--------------------------------- 249
V+W +I G ++ + ELF+ M
Sbjct: 336 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHS 395
Query: 250 ------PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
R I NS+IS Y GD++ A +F M RD+VSW MI Y++IGN+
Sbjct: 396 LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIK 455
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACA 362
AR FD M RN ++WN +L Y++ + L+++ M+ + D P+ + +++ CA
Sbjct: 456 AREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCA 515
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
++G +G I + K + +V ++ + +TMY+KCG + A+ +FD + K+VVSWN+
Sbjct: 516 DIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNA 575
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
MI GY HG G++A + F +M +G P+ +++ VLS C+H+G+V EG YFD+M R++
Sbjct: 576 MITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVH 635
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
I P +EH+ CMVDLLGRAG + ++++L+ K+PM+ +WGALLSAC H N EL ++
Sbjct: 636 GISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELA 695
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
A+H+ EL+ D G Y+LL+ IY+ GK D+ +R++M++K ++K G S
Sbjct: 696 AKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 198/472 (41%), Gaps = 47/472 (9%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
V L + +L SC + + + LL + + + + ++ S+S + F
Sbjct: 39 VFLQNTLLHAYFSCGALSDARR----LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELF 94
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
D + D NT+M + L + + N +TF + K C +
Sbjct: 95 DRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCR 154
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
++ K F D V +L+ M+ CG V A ++F + NSM+ GY
Sbjct: 155 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 214
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL----------------- 276
K + A E F+ M ERD+ +WN MI+ G + A GL
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 274
Query: 277 ---------FDL-------------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
F L +P D + +I+ YAK G+ A+ F+ + R
Sbjct: 275 SSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 334
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
N VSW +L+ ++ + + + + LF++M ++ +L ++++ C N + +G+ +H
Sbjct: 335 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S K +++S SL+++YAKCG + A VF +M+E+++VSW SMI Y G
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
KA E F M+ R N T+ +L A G +G + M + P
Sbjct: 455 KAREFFDGMDTR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 192/434 (44%), Gaps = 45/434 (10%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H +++ S D + AS L +L S + F+ +Q+ ++ ++ L
Sbjct: 291 QLHAKVIRSLPQIDPYVAS-ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQY 349
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ F + +M A+ + + + L C L G+++H+ +K G + V
Sbjct: 350 -ECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
NSLI +Y+ CG++ +A VF D+V+W SMI Y + + ARE FD M R+
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNA 468
Query: 255 FTWNSMISGYVDVGDMEAANGLF-------DLMP--------FR---------------- 283
TWN+M+ Y+ G E ++ D+ P FR
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528
Query: 284 ---------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+V N I Y+K G ++ A+ FD + ++VVSWN ++ Y + +
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLL 393
+ FD M+ AKP+ S ++VL+ C++ G++ G+ + + I P + + ++
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ + G + A+++ D M K W +++ +HG E A E+ + +P+
Sbjct: 649 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA-ELAAKHVFELDSPDS 707
Query: 453 ATFICVLSACTHAG 466
+++ + + AG
Sbjct: 708 GSYMLLAKIYSDAG 721
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 50/360 (13%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ C +L + +H R+V G +F++N+L+H Y CG + DAR++
Sbjct: 12 RSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD------ 65
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+ E ++ T N M++GY G + A LFD MP RD
Sbjct: 66 ------------------------IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD 101
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRM-----CMRNVVSWNILLAL--YVRCKDYC-ECL 336
V SWN ++ GY + F M + N ++ ++ + C++ + L
Sbjct: 102 VASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL 161
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF + E +L+ + C G +D + S I+ +P + S+L Y
Sbjct: 162 GLFWKFDFWGDPDVETALVDMFVRC---GYVDFASRLFSQIE----RPTIFCRNSMLAGY 214
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
AK +D A F++M E++VVSWN MI G+ +AL + +EM ++G + T+
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 274
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKL 514
L+AC + W L ++ + P+++ Y +++L + G ++++ + + L
Sbjct: 275 SSLTACAR---LFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 160/404 (39%), Positives = 241/404 (59%), Gaps = 2/404 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ + CG++ AR+VF PV D+ +WN+M+ G KN A +F MP
Sbjct: 76 DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP 135
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFD 309
R+ +WN+M++ GDM AA LF P + D + W M+ GY GNV A F
Sbjct: 136 VRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFG 195
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVID 368
M +RN+VSWN ++A YV+ + LR+F M+ +PN ++L SVL C+N+ +
Sbjct: 196 AMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALG 255
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ +H + K + +V + TSLL+MY KCG ++ A VFD M+ K++V+WN+MI GY
Sbjct: 256 FGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYA 315
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG G +A+++F +M+ G P+ T + VL+AC H G+ G F+ MQ YKIEP++
Sbjct: 316 QHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQI 375
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY CMVDLL RAGL+ + ++ +P E P+ +G LL+AC + N E + A+ L+E
Sbjct: 376 DHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIE 435
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+P++ G YV L+NIYA KW +V +RR MK+ + K G S
Sbjct: 436 QDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYS 479
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV---TSARNCFDRMCMRNVV 317
++ V GD+ A F + ++NC++ GYAK + AR FD + + V
Sbjct: 19 VAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTV 78
Query: 318 SWNILLALYVRCKDYCECLRLF-----------DRMIRGDAKP----------------N 350
S+N LL+ + C D R+F + M+ G +K N
Sbjct: 79 SYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRN 138
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
S +++ A A G D+G + K D +L T++++ Y G + A F
Sbjct: 139 AVSWNAMVAALACSG--DMGA-AEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFG 195
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDATFICVLSACTH 464
M +N+VSWN+++ GY + + + AL +F M E PN +T VL C++
Sbjct: 196 AMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSN 250
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 13/218 (5%)
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
+V ++ FF + + N ++ ++ + AL + + V+ N T +
Sbjct: 186 NVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVL 245
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
C+ + +L G++VH +K ++ V SL+ MY CG++ DA KVF++ D+V
Sbjct: 246 LGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIV 305
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIF-TWNSMI--------SGYVDVGD--MEAA 273
WN+MI GY ++ A +LF+ M + + W +++ +G D G E
Sbjct: 306 AWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETM 365
Query: 274 NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
+ + P D ++CM+D + G + A N M
Sbjct: 366 QEAYKIEPQID--HYSCMVDLLCRAGLLERAVNMIHSM 401
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 241/405 (59%), Gaps = 4/405 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ + CG++ A +VF PV D+ +WN+M+ G KN + A +F MP
Sbjct: 71 DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFD 309
R+ +WN+M++ GDM AA LF P + D + W M+ GY GNV A F
Sbjct: 131 ARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFR 190
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA--KPNEASLMSVLTACANMGVI 367
M +RN+VSWN ++A YV+ + LR+F M+ DA +PN ++L SVL C+N+ +
Sbjct: 191 AMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVE-DAIVQPNPSTLSSVLLGCSNLSAL 249
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+ +H + K + + + TSLL+MY KCG +D A +FD M K++V+WN+MI GY
Sbjct: 250 GFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGY 309
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG G KA+++F +M+ G P+ T + VL+AC H G+ G F+ MQ Y IEP+
Sbjct: 310 AQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQ 369
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
V+HY CMVDLL RAGL+ + ++ +P E P+ +G LL+AC + N E + A+ L+
Sbjct: 370 VDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLI 429
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
E +P++ G YV L+NIYA +WD+V +RR MK+ + K G S
Sbjct: 430 EQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYS 474
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N ++ ++ + AL + + V+ N T + C+ + +L G++VH +
Sbjct: 201 NAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCM 260
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K + V SL+ MY CG++ DA K+F++ D+V WN+MI GY ++ A +
Sbjct: 261 KLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIK 320
Query: 245 LFDFMPERDIF-TWNSMI--------SGYVDVGD--MEAANGLFDLMPFRDVVSWNCMID 293
LF+ M + + W +++ +G D G E +++ P V ++CM+D
Sbjct: 321 LFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEP--QVDHYSCMVD 378
Query: 294 GYAKIGNVTSARNCFDRM 311
+ G + A N M
Sbjct: 379 LLCRAGLLERAVNMIHSM 396
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
PD + +LL+ + CG +D A VF M ++V SWN+M+ G +G E+A MF M
Sbjct: 70 PDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAM 129
Query: 444 EKR 446
R
Sbjct: 130 PAR 132
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 254/435 (58%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N L+ G + ARK+F+ P +++ W +M+ G ++ V AR LFD MPER++
Sbjct: 164 NILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVV 223
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MISGY ++ A+ LF MP RD+ SWN MI G+ + N+ A+ FD+M RN
Sbjct: 224 SWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRN 283
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+W ++ Y++ L+LF+ M+ +PN+ + + + AC+N+ + GQ +H
Sbjct: 284 VVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQ 343
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
I K + D + ++L+ +YAKCG + LAR VF+ EK+V+SWN MI Y HG G +
Sbjct: 344 MICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLE 403
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ ++ +M++ G PND T++ +LSAC+H+G+V EG F+ M + I + EHY C++
Sbjct: 404 AIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLI 463
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DL RAG + D++ L+ L +E +W ALL C++H N +G + A++L+E EP + G
Sbjct: 464 DLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAG 523
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
Y LL NIYAS GKW E +R M ++ L+K G S + + + +
Sbjct: 524 TYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDL 583
Query: 616 VYSMLGEIGAQMKMC 630
+ S+L +I M+M
Sbjct: 584 INSLLQDIHDIMRMA 598
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 168/335 (50%), Gaps = 17/335 (5%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFP--LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNS 197
A +F+Y+ A V NH P + ++ A R + + +++ R + D+ +
Sbjct: 18 AAAFFYDSAAAVDVS-NHVQDPNRRVAELAAAGR-VSDARRLFDRTP----DRDVVSWTA 71
Query: 198 LIHMYSVCGEVLDARKVFEDGPVW-DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
L+ Y+ G + DAR +F+ ++VTW +++ GY + V A LF MPER++ +
Sbjct: 72 LVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVS 131
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WN+M+ Y G + A LF+ MP RD SWN ++ + GN+ AR FDRM RNV
Sbjct: 132 WNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNV 191
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
++W ++A R E LFD M + N S ++++ A +ID H
Sbjct: 192 MAWTTMVAGIARSGSVNEARALFDGM----PERNVVSWNAMISGYARNHMIDEA---HDL 244
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
K + D+ ++T + + ++ A+ +FD M +NVV+W +M+ GY Q E A
Sbjct: 245 FMKMPTR-DIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETA 303
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
L++F M G PN TF+ + AC++ + EG
Sbjct: 304 LQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEG 338
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 125/244 (51%), Gaps = 13/244 (5%)
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM-PFRDVVSWNCMIDGYA 296
V AR LFD P+RD+ +W ++++ Y G + A LFD R+VV+W ++ GYA
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYA 109
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
+ G V A F RM RNVVSWN +L Y + LF+ M DA S
Sbjct: 110 RAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDA----GSWNI 165
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L A G ID + + + + +V+ T+++ A+ G ++ AR +FD M E+N
Sbjct: 166 LLAALVRSGNIDKARKLFDRMP----ERNVMAWTTMVAGIARSGSVNEARALFDGMPERN 221
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VVSWN+MI GY + ++A ++FM+M PT + A++ +++ + FD
Sbjct: 222 VVSWNAMISGYARNHMIDEAHDLFMKM----PTRDIASWNIMITGFIQNKNLERAQELFD 277
Query: 477 LMQR 480
M R
Sbjct: 278 KMPR 281
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 15/225 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + T+M +L AL + M+ + N TF C+ +
Sbjct: 275 LFDKMPRRNVVTWTTMMNGYLQSIQSETALQLF-NGMLIDGIRPNQVTFLGAVDACSNLA 333
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L EG++VH I K F+ D F+ ++L+++Y+ CGE++ ARKVF D+++WN MI
Sbjct: 334 GLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIA 393
Query: 232 GYVKNREVGF-ARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLM------ 280
Y + VG A L++ M E + T+ ++S G ++ +F+ M
Sbjct: 394 AYA-HHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSI 452
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
RD + C+ID ++ G + A+ + + + WN LL
Sbjct: 453 AVRD-EHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLG 496
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 309/581 (53%), Gaps = 16/581 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L S + +K +H+++L +G D+ A L K+ S F+ +
Sbjct: 233 VLNAFSSPAALKWGKAVHSRILNAGHESDT-AVGTALVKMYAKCGSYKDCRQVFEKLVNR 291
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D NT++ L + S Y +M + V N T+ +L C +L GK++
Sbjct: 292 DLIAWNTMIGG-LAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEI 350
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H+R+ K GF D+ V+N+LI MYS CG + DAR VF+ D+++W +MI G K+
Sbjct: 351 HSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKS--- 407
Query: 240 GFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSW 288
GF E E + T+ S+++ +E + + D
Sbjct: 408 GFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVG 467
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N +++ Y+ G+V AR FDRM R++V++N ++ Y E L+LFDR+ K
Sbjct: 468 NTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLK 527
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P++ + +++L ACAN G ++ + IH+ ++K D + +L++ YAKCG A V
Sbjct: 528 PDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIV 587
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ MT++NV+SWN++I G HG+G+ AL++F M+ G P+ TF+ +LSAC+HAG++
Sbjct: 588 FEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLL 647
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M + + I P +EHYGCMVDLLGRAG + ++E L+ +P +A +WGALL
Sbjct: 648 EEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLG 707
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N + + A+ ++L+ + YV LS++YA+ G WD LR++M+++ + K
Sbjct: 708 ACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKE 767
Query: 589 VGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
G S + G+ + E+ + +Y+ L + MKM
Sbjct: 768 PGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKM 808
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 184/362 (50%), Gaps = 15/362 (4%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K C ++ L G++VH I++ D + N+LI+MY CG + +AR+V++ +
Sbjct: 31 KRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERT 90
Query: 225 --TWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGL-F 277
+WN+M+ GY++ + A +L M + D T S +S G +E + F
Sbjct: 91 VHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHF 150
Query: 278 DLMP---FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
M DV NC+++ YAK G++ AR FD+M ++VVSW I + Y C
Sbjct: 151 QAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSET 210
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
+F +M + PN + +SVL A ++ + G+ +HS I + D + T+L+
Sbjct: 211 AFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVK 270
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAKCG R VF+ + +++++WN+MI G G E+A E++ +M++ G PN T
Sbjct: 271 MYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKIT 330
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYK--IEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
++ +L+AC ++ + W ++ R+ K + ++ + R G ++D+ +
Sbjct: 331 YVILLNACVNSAAL---HWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD 387
Query: 513 KL 514
K+
Sbjct: 388 KM 389
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 11/255 (4%)
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
A+ N + M +L C + + G+ +H +I + R PD +L+ MY +CG ++ AR
Sbjct: 19 AQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEAR 78
Query: 407 NVFDNMT--EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
V+ ++ E+ V SWN+M++GY +G EKAL++ +M++ G P+ T + LS+C
Sbjct: 79 QVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKS 138
Query: 465 AGMVLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
G + G +F MQ + KV + C++++ + G + ++ E+ K+ ++ + W
Sbjct: 139 PGALEWGREIHFQAMQAGLLFDVKVAN--CILNMYAKCGSIEEAREVFDKMEKKSVVS-W 195
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPG--PYVLLSNIYASEG--KWDEVENLRRI 579
+ + SE + Q ME E P Y+ + N ++S KW + + R +
Sbjct: 196 TITIGGYADCGRSETAFEIFQK-MEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRIL 254
Query: 580 MKEKELEKAVGSSLV 594
E + AVG++LV
Sbjct: 255 NAGHESDTAVGTALV 269
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/498 (35%), Positives = 284/498 (57%), Gaps = 18/498 (3%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+F D E + F N I+ F+ P FY +KM + V + +TFP K C +
Sbjct: 14 IFSDPTHEINVFAFNAIISGFITNGFPEEGFEFY-QKMRNEGVMPDKFTFPCAIKACLDV 72
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+ KK+H + K G ELD+F+ ++L++ Y G + A+ FE+ P+ D+V WN+M+
Sbjct: 73 LEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMV 129
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAA---NGLFDLMPFR 283
+GY + + E F M + + FT ++S + +GD+ +G M +
Sbjct: 130 NGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYD 189
Query: 284 DVVSW-NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
V+ N +ID Y K + A F+ M +++ SWN + +++ +C D+ LRL DRM
Sbjct: 190 SGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRM 249
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI------QKCRIKPDVLLSTSLLTMY 396
+ +P+ ++ +VL AC+++ + G+ IH Y+ + + DVLL +++ MY
Sbjct: 250 LGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMY 309
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
AKCG M A VF+ M K+V SWN MIMGYGMHG G +ALEMF M + P++ TF+
Sbjct: 310 AKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFV 369
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSAC+HAG V +G + M+ Y + P +EHY C++D+LGRAG + ++ EL +P+
Sbjct: 370 GVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPI 429
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
EA P +W ALL+AC H ++ L ++ AQ + ELEP G YVL+SN+Y + G+++EV +
Sbjct: 430 EANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEV 489
Query: 577 RRIMKEKELEKAVGSSLV 594
R M+++ + K G S +
Sbjct: 490 RHTMRQQNVRKTPGCSWI 507
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 31/405 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+++C V E +IH L GL D F S L + + + F+ + D +
Sbjct: 66 IKACLDVLEIKKIHGLLFKFGLELDVFIGS-ALVNCYLKFGLMEHAQVAFEELPIRDVVL 124
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + F + + +M + V + +T + V A + L G+ +H
Sbjct: 125 WNAMVNGYAQIGQ-FEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFA 183
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G++ + V NSLI MY C + DA ++FE D+ +WNS+ + + +
Sbjct: 184 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTL 243
Query: 244 ELFDFM----PERDIFTWNSM---------------ISGYVDVGDMEAANGLFDLMPFRD 284
L D M + D+ T ++ I GY+ V + D D
Sbjct: 244 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID-----D 298
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V+ N +ID YAK G++ A F+RM ++V SWNI++ Y E L +F RM
Sbjct: 299 VLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 358
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
KP+E + + VL+AC++ G + G+ ++ K + P + T ++ M + G +D
Sbjct: 359 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 418
Query: 404 LARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
A + M E N V W +++ +H E A + E+E
Sbjct: 419 EAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELE 463
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 395 MYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY+KC M+ A ++F + T E NV ++N++I G+ +G E+ E + +M G P+
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
TF C + AC VLE L+ + + +E V +V+ + GLM ++ +
Sbjct: 61 TFPCAIKACLD---VLEIKKIHGLLFK-FGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116
Query: 514 LPMEAGPALWGALLSA 529
LP+ LW A+++
Sbjct: 117 LPIR-DVVLWNAMVNG 131
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 203/600 (33%), Positives = 302/600 (50%), Gaps = 52/600 (8%)
Query: 87 QDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYE 146
+++F+ + +L C L ++ F I +PD N ++ + AL F
Sbjct: 79 RNTFSYNALLSA-CARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAA 137
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
FV N Y+F CA ++ R G++VHA + K D+++ +L+ MY+ C
Sbjct: 138 MHADDFVL-NAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCE 196
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPER-------- 252
+A+KVF+ P ++V+WNS+I Y +N V A LF F+P+
Sbjct: 197 RPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMS 256
Query: 253 --------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
D+ N+++ Y G A +FD M R VV
Sbjct: 257 ACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVV 316
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
S MI GYAK NV A+ F +M +NVV+WN+L+A Y + E LRLF R+ R
Sbjct: 317 SETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRES 376
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMYAKCG 400
P + +VL ACAN+ + +GQ H ++ K + DV + SL+ MY K G
Sbjct: 377 VWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTG 436
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ VF+ M ++ VSWN+MI+GY +G+ + AL +F M P+ T I VLS
Sbjct: 437 SISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLS 496
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC H+G+V EG YF M + I P +HY CM+DLLGRAG +++ EEL+ +PME
Sbjct: 497 ACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDA 556
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
LW +LL AC H N ++G+ A L EL+P + GPYVLLSN+YA GKW +V +RR M
Sbjct: 557 VLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSM 616
Query: 581 KEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQIS 639
K + + K G S + G + + +N P R I + L I QM+M R + ++I+
Sbjct: 617 KHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEI-HDTLRII--QMQMSRMSIDAEIA 673
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 124/250 (49%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+ F N+++S Y +G + A +FD MP R+ S+N ++ A++G A F +
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
+ S+N ++A + + LR M D N S S L+ACA+ G+
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H+ + K DV + T+L+ MYAKC + A+ VFD M E+N+VSWNS+I Y +G
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGP 228
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
++AL +F+ M K G P++ T V+SAC EG M + + +
Sbjct: 229 VDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNN 288
Query: 493 CMVDLLGRAG 502
+VD+ + G
Sbjct: 289 ALVDMYAKCG 298
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 186/416 (44%), Gaps = 77/416 (18%)
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
F + F+ N+L+ Y+ G + DAR+VF+ P + ++N+++ + A LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 248 FMPERDIFTWNSMISGYVDVGD----------MEAANGLFDLMPF--------------- 282
+P+ D ++N++++ G M A + + + F
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 283 --------------RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
DV ++D YAK A+ FD M RN+VSWN L+ Y +
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC-RIKPDVL 387
E L LF RM++ P+E +L SV++ACA + G+ +H+ + K R + D++
Sbjct: 226 NGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV 285
Query: 388 LSTSLLTMYAKCGVMDLARNVFD-------------------------------NMTEKN 416
L+ +L+ MYAKCG A+ VFD M EKN
Sbjct: 286 LNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKN 345
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH-AGMVLEGWWYF 475
VV+WN +I Y + + E+AL +F+ +++ P T+ VL+AC + A + L +
Sbjct: 346 VVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHV 405
Query: 476 DLMQRIYKIE--PKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+++ ++ + P+ + + +VD+ + G + D ++ ++ + W A++
Sbjct: 406 HVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVS-WNAMI 460
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 301/543 (55%), Gaps = 18/543 (3%)
Query: 68 STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
S +K +IH ++ SG S + FA + V+ + ++ + FD + E D NT+
Sbjct: 44 SDLKRGKEIHGSVITSGFSWNLFAMTGVVN-MYAKCRQINDAYNMFDRMPERDLVCWNTM 102
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNH----YTFPLLGKVCAGIRSLREGKKVHARI 183
+ + + F ++ ++ + E H T + A R LR G VH +
Sbjct: 103 ISGYA--QNGFAKVALM---LVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYV 157
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
++ GFE + V +L+ MYS CG V AR +F+ +V+WNSMIDGYV++ + A
Sbjct: 158 LRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAM 217
Query: 244 ELFDFMPERDIFTWNSMISGYV----DVGDMEAA---NGLFDLMPF-RDVVSWNCMIDGY 295
+F M + + N + G + D+GD+E + L D + DV N +I Y
Sbjct: 218 LIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMY 277
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
+K V A + F + + +VSWN ++ Y + E L F M + KP+ +++
Sbjct: 278 SKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMV 337
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
SV+ A A + + +WIH + + + +V + T+L+ MYAKCG + AR +FD M +
Sbjct: 338 SVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR 397
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V++WN+MI GYG HG G+ ++E+F EM+K PND TF+C LSAC+H+G+V EG +F
Sbjct: 398 HVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFF 457
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ M++ Y IEP ++HYG MVDLLGRAG + + + + K+P++ G ++GA+L AC H N
Sbjct: 458 ESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKN 517
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+LG+ A + +L P D G +VLL+NIYA+ W +V +R IM++ L+K G SLV
Sbjct: 518 VDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVE 577
Query: 596 PGE 598
G
Sbjct: 578 IGN 580
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 215/425 (50%), Gaps = 14/425 (3%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
ALSF+ +M V Y F L K+C L+ GK++H ++ GF +LF ++
Sbjct: 14 ALSFF-SRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVV 72
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIF 255
+MY+ C ++ DA +F+ P DLV WN+MI GY +N A L M E D
Sbjct: 73 NMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSI 132
Query: 256 TWNSMISGYVDVGDME---AANGLFDLMPFRDVVSWN-CMIDGYAKIGNVTSARNCFDRM 311
T S++ D + A +G F +V+ + ++D Y+K G+V+ AR FD M
Sbjct: 133 TIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGM 192
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
R VVSWN ++ YV+ D + +F +M+ +P ++M L ACA++G ++ G+
Sbjct: 193 DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGK 252
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
++H + + ++ DV + SL++MY+KC +D+A ++F N+ K +VSWN+MI+GY +G
Sbjct: 253 FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNG 312
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+AL F EM+ R P+ T + V+ A + + W L+ R + ++ V
Sbjct: 313 CVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRF-LDKNVFVM 371
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
+VD+ + G + + +L + W A++ TH LGK + E++
Sbjct: 372 TALVDMYAKCGAIHTARKLFDMMNARH-VITWNAMIDGYGTHG---LGKTSVELFKEMKK 427
Query: 552 RDPGP 556
P
Sbjct: 428 GTIKP 432
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
+L Y + L F RM +P + +L C + + G+ IH +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
++ T ++ MYAKC ++ A N+FD M E+++V WN+MI GY +G + AL + +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 442 EMEKRGPTPNDATFICVLSACTHA-----GMVLEGW 472
M + G P+ T + +L A GM + G+
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGY 156
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 294/521 (56%), Gaps = 41/521 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D N ++ + AL + M +K V + T+ CA +
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD-MQSKGVRLDSTTYTSSLTACARLS 284
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SLR GK++HA++++ +D +V ++L+ +Y+ CG +A+ VF + V W +I
Sbjct: 285 SLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIA 344
Query: 232 GYVKNREVGFARELFDFMPE---------------------------------------R 252
G++++ + ELF+ M +
Sbjct: 345 GFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQ 404
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+ NS+IS Y ++++A +F M +D+VSW MI ++++GN+ AR FD M
Sbjct: 405 AVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMS 464
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQ 371
+NV++WN +L Y++ + LR+++ M+ D +P+ + +++ CA++G +G
Sbjct: 465 TKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGD 524
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
I K + D ++ +++TMY+KCG + AR VFD + K++VSWN+MI GY HG
Sbjct: 525 QIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
G++A+E+F ++ KRG P+ +++ VLS C+H+G+V EG YFD+M+R++ I P +EH+
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHF 644
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
CMVDLLGRAG + ++++L+ ++PM+ +WGALLSAC H N+EL ++ A+H+ EL+
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS 704
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
D G Y+L++ IYA GK D+ +R++M++K ++K G S
Sbjct: 705 PDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 204/472 (43%), Gaps = 47/472 (9%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
V L + +L SC + + + LL++ ++ + V+ L +S +V F
Sbjct: 39 VFLQNTLLHAYLSCGALPDARR----LLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELF 94
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+ D NT+M + +L + + N +TF K C +
Sbjct: 95 GRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGER 154
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
++ + K G + D V +L+ M+ CG V A ++F + NSM+ GY
Sbjct: 155 SLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGY 214
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-EAANGLFDL------------- 279
VK V A ELFD MPERD+ +WN M+S G + EA + + D+
Sbjct: 215 VKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYT 274
Query: 280 -------------------------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+P D + +++ YAK G A+ F+ + R
Sbjct: 275 SSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDR 334
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
N V+W +L+A +++ + E + LF++M ++ +L ++++ C + + +G+ +H
Sbjct: 335 NNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLH 394
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S K V++S SL++MYAKC + A ++F M EK++VSW SMI + G
Sbjct: 395 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIA 454
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
KA E F M T N T+ +L A G +G +++M + P
Sbjct: 455 KAREFFDGMS----TKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRP 502
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 76/357 (21%)
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK-VFEDGPVWDLVTWNSMIDGYVKNRE 238
H R+V G +F++N+L+H Y CG + DAR+ + D +++T N M++GYVK
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVD----------------VGD-----------ME 271
+ A ELF MP RD+ +WN+++SGY GD M+
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 272 AANGL---------------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
+ L F DV + ++D + + G V A F R+ +
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAA--ALVDMFVRCGTVDLASRLFVRIKEPTI 204
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGD------------------------------ 346
N +L YV+ L LFD M D
Sbjct: 205 FCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSK 264
Query: 347 -AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+ + + S LTACA + + G+ +H+ + + D ++++L+ +YAKCG A
Sbjct: 265 GVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEA 324
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ VF+++ ++N V+W +I G+ HG +++E+F +M T + ++S C
Sbjct: 325 KGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 178/500 (35%), Positives = 278/500 (55%), Gaps = 17/500 (3%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
L F I P ++ N++++ F+ ++P ++ Y +++ +H+TFP + K C I
Sbjct: 48 LVFRQIDAPSVYIWNSMIRGFVNNHNPRMSM-LLYRQLIENGYSPDHFTFPFVLKACCAI 106
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
GK +H IVK GFE D + L+HMY C ++ KVF++ P+W++V W +I
Sbjct: 107 ADQDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLI 166
Query: 231 DGYVKNREVGFARELFDFMPE-----RDIFTWNSMI----SGYVDVGD------MEAANG 275
GYV N + A ++F M +I N++I S D G +A
Sbjct: 167 AGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYD 226
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
F +++ +++ YAK G+ AR+ F++M RN+VSWN ++ Y + + + E
Sbjct: 227 PFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEA 286
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L LF M P++A+ +SVL+ CA++ + +GQ +H+Y+ K I D+ L+T+LL M
Sbjct: 287 LDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDM 346
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDAT 454
YAK G + A+ +F ++ +++VV W SMI G MHG G +AL MF M E P+ T
Sbjct: 347 YAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHIT 406
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+I VL AC+H G+V E +F LM +Y I P EHYGCMVDLL R+G ++E L+ +
Sbjct: 407 YIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEAERLMETM 466
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
++ ++ GALL C H N + V + L ELE G +VLLSNIYA G+W++V
Sbjct: 467 AIQPNISIXGALLYGCQIHENLXVANQVKERLTELESCQSGAHVLLSNIYAKAGRWEDVN 526
Query: 575 NLRRIMKEKELEKAVGSSLV 594
R++MK K + K +G S V
Sbjct: 527 GTRKVMKHKRITKIIGHSSV 546
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 308/543 (56%), Gaps = 10/543 (1%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE 118
+L L + V++ Q+HT ++ SGL F + ++ SL VS + FD ++
Sbjct: 198 AVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLM-VSDAKAVFDSMEN 256
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
+A N+++ F+ A +Y +M + V+ F + K+CA I+ + K+
Sbjct: 257 RNAVSWNSMIAGFVTNGLDLEAFELFY-RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQ 315
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF-EDGPVWDLVTWNSMIDGYVKNR 237
+H +++K G + DL ++ +L+ YS C E+ DA K+F V ++V+W ++I GYV+N
Sbjct: 316 LHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNG 375
Query: 238 EVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS-WNCMI 292
A LF M + FT++++++ V + + L + + S +
Sbjct: 376 RTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQI-HALVVKTNYENSPSVGTALS 434
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
D Y+KIG+ A F+ + +++V+W+ +L+ Y + D +++F ++ + +PNE
Sbjct: 435 DSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEF 494
Query: 353 SLMSVLTACAN-MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ SVL ACA ++ G+ HS K + +S++L+TMYAK G ++ A VF
Sbjct: 495 TFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR 554
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
++++VSWNSMI GY HG G+K+L++F EM + + TFI V+SACTHAG+V EG
Sbjct: 555 QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG 614
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
YFDLM + Y I P +EHY CMVDL RAG++ + +L++K+P AG +W LL+AC
Sbjct: 615 QRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACR 674
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H N +LG++ A+ L+ L+P+D YVLLSNIYA+ G W E +R++M K+++K G
Sbjct: 675 VHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGY 734
Query: 592 SLV 594
S +
Sbjct: 735 SWI 737
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 9/306 (2%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
KVC + GK+VH + +KCGF D+ V SL+ MY V D +VF++ V ++V
Sbjct: 100 KVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVV 159
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM 280
+W S++ GY +N A +LF M I FT+ +++ G G +E + ++
Sbjct: 160 SWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMV 219
Query: 281 PFRDVVS----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
+ S N M++ Y+K V+ A+ FD M RN VSWN ++A +V E
Sbjct: 220 IKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAF 279
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF RM K + +V+ CAN+ + + +H + K D+ + T+L+ Y
Sbjct: 280 ELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAY 339
Query: 397 AKCGVMDLARNVFDNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
+KC +D A +F M +NVVSW ++I GY +G+ ++A+ +F +M + G PN T+
Sbjct: 340 SKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTY 399
Query: 456 ICVLSA 461
+L+A
Sbjct: 400 STILTA 405
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 92/181 (50%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
DV ++D Y K +V FD M ++NVVSW LLA Y + + L+LF +M
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
KPN + +VL A G ++ G +H+ + K + + + S++ MY+K ++
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A+ VFD+M +N VSWNSMI G+ +G +A E+F M G F V+ C
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Query: 464 H 464
+
Sbjct: 306 N 306
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
++ FD + + N LL + R E L LF + R + + +SL VL C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ +G+ +H KC DV + TSL+ MY K ++ VFD M KNVVSW S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ GY +G E+AL++F +M+ G PN TF VL G V +G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 242/396 (61%)
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
Y + ++ LF +F W ++I G+ GD+ +A LFD MP + +VS M+
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAML 131
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YAK G + +AR FD M R+ V WN+++ Y + E L LF RM++ AKPNE
Sbjct: 132 TCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEV 191
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+++SVL+AC +G ++ G+W+HSYI+ I+ +V + T+L+ MY+KCG ++ AR VFD +
Sbjct: 192 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 251
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+K+VV+WNSMI+GY MHG ++AL++F M + G P + TFI +LSAC H+G V EGW
Sbjct: 252 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 311
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F+ M+ Y IEPK+EHYGCMV+LLGRAG + + ELV + +E P LWG LL AC
Sbjct: 312 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 371
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H LG+ + + L++ + G Y+LLSNIYA+ G WD V LR +MK+ ++K G S
Sbjct: 372 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 431
Query: 593 LVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ E + ++ +Y ML EI +K
Sbjct: 432 SIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 467
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 17/227 (7%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FDG++E D N ++ + P AL + + AK + N T + C +
Sbjct: 145 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK-AKPNEVTVLSVLSACGQL 203
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+L G+ VH+ I G + ++ V +L+ MYS CG + DAR VF+ D+V WNSMI
Sbjct: 204 GALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMI 263
Query: 231 DGYVKNREVGFARE---LFDFMPERDIFTWNSMISGYVDV----GDMEAANGLFDLMPFR 283
GY + GF++E LF M + N G + G + +F+ M
Sbjct: 264 VGYAMH---GFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDE 320
Query: 284 -----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ + CM++ + G+V A M + + V W LL
Sbjct: 321 YGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 367
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 261/423 (61%), Gaps = 7/423 (1%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+LR+ + C D+ N++I Y CGE+ A++VF++ P + V+W++M+
Sbjct: 4 ALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVG 63
Query: 232 GYVKNREVGFARELFDFMPE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
GY E+ ARE+FD MP R++ TWNSM++G+ G + A +FD MP R++VSWN
Sbjct: 64 GYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWN 123
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAK 348
M+ GY+ ++ AR FD M ++VVSW +++ Y + Y + L LF M + +
Sbjct: 124 AMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQ 183
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCR--IKPDVLLSTSLLTMYAKCGVMDLAR 406
PNE +++SVL+ACAN+ ++ G+W+H++I K + + + L +L+ MYAKCG D+A
Sbjct: 184 PNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAV 243
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+F+++ KNV +WN++I M+G +++ F +M++ G PND TF+ VL+AC+H G
Sbjct: 244 KIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGG 303
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+V EG F M ++P+V+HYGCMVD+LGRAGL+ ++EEL+ +PM ++GAL
Sbjct: 304 LVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGAL 363
Query: 527 LSACSTHSNSELGKIVAQ--HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
L AC H ++ + V H + L + G +VL+S+IYA+ GKW +V R++++
Sbjct: 364 LGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSG 423
Query: 585 LEK 587
+ K
Sbjct: 424 IRK 426
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D ++ + L + V+ N T + CA +
Sbjct: 141 LFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLT 200
Query: 172 SLREGKKVHARIVKCGFEL--DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+L EG+ VHA I K L + + +LI MY+ CG A K+F ++ WN++
Sbjct: 201 ALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNAL 260
Query: 230 IDGYVKNREVGFARELFD 247
I N G AR+ D
Sbjct: 261 ITRLAMN---GNARDSVD 275
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 290/527 (55%), Gaps = 8/527 (1%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+HT ++ +GL + + S L L +V + + FD + N+++ +
Sbjct: 215 QVHTVVVKNGLDK-TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
AL +Y M +V + +F + K+CA ++ LR +++H +VK GF D +
Sbjct: 274 GLDLEALGMFYS-MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 195 RNSLIHMYSVCGEVLDARKVFED-GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
R +L+ YS C +LDA ++F++ G V ++V+W +MI G+++N A +LF M +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 254 I----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+ FT++ +++ + E + R ++D Y K+G V A F
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV-ID 368
+ +++V+W+ +LA Y + + +++F + +G KPNE + S+L CA +
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ H + K R+ + +S++LLTMYAK G ++ A VF EK++VSWNSMI GY
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HGQ KAL++F EM+KR + TFI V +ACTHAG+V EG YFD+M R KI P
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EH CMVDL RAG + + +++ +P AG +W +L+AC H +ELG++ A+ ++
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 692
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
++P D YVLLSN+YA G W E +R++M E+ ++K G S +
Sbjct: 693 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 136/546 (24%), Positives = 236/546 (43%), Gaps = 71/546 (13%)
Query: 113 FDGIQEPDAFMCNTIMKSFLM--LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD ++E + T++ + +ND L + +M + + N +TF V A
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTL---FMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
G +VH +VK G + + V NSLI++Y CG V AR +F+ V +VTWNSMI
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL---FDLMPFR---- 283
GY N G E + SM YV + + A+ + +L R
Sbjct: 268 SGYAAN---GLDLEALGM--------FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 284 ---DVVSWNCMID---------GYAKIGNVTSARNCFDRM-CMRNVVSWNILLALYVRCK 330
VV + + D Y+K + A F + C+ NVVSW +++ +++
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
E + LF M R +PNE + +LTA + VI + +H+ + K + + T
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGT 432
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
+LL Y K G ++ A VF + +K++V+W++M+ GY G+ E A++MF E+ K G P
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
N+ TF +L+ C + F +++ + ++ + + G + +EE
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE- 551
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
V K E W +++S + H + V + + + + + G V ++A+
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG--VTFIGVFAA---- 605
Query: 571 DEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC-----PPHRKCIV--YSMLGEI 623
+ LV GE + +V +C H C+V YS G++
Sbjct: 606 -----------------CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 624 GAQMKM 629
MK+
Sbjct: 649 EKAMKV 654
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 205/456 (44%), Gaps = 52/456 (11%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++H + +K GF D+ V SL+ Y D RKVF++ ++VTW ++I GY +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 236 N-------------REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
N + G F F + + + V + NGL +P
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
N +I+ Y K GNV AR FD+ +++VV+WN +++ Y E L +F M
Sbjct: 232 S-----NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ +E+S SV+ CAN+ + + +H + K D + T+L+ Y+KC M
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 403 DLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
A +F + NVVSW +MI G+ + E+A+++F EM+++G PN+ T+ +L+A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 462 C-------THAGMVLE--------GWWYFDLMQRIYKIEPKVEHYGCMVD--------LL 498
HA +V G D ++ K+E + + + D +L
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 499 GRAGLMRDSEELV------SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
++E + +K ++ + ++L+ C+ +N+ +G+ H ++ R
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA-TNASMGQGKQFHGFAIKSR 525
Query: 553 DPGPYVLLS---NIYASEGKWDEVENLRRIMKEKEL 585
+ S +YA +G + E + + +EK+L
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 8/263 (3%)
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF----DFMPERDIFTWNSMISGYV 265
+A +F+ P D ++ S++ G+ ++ A+ LF E D ++S++
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 266 DVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ D L DV ++D Y K N R FD M RNVV+W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
L++ Y R E L LF RM +PN + + L A GV G +H+ + K
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
+ + +S SL+ +Y KCG + AR +FD K+VV+WNSMI GY +G +AL MF
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 442 EMEKRGPTPNDATFICVLSACTH 464
M ++++F V+ C +
Sbjct: 285 SMRLNYVRLSESSFASVIKLCAN 307
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 7/237 (2%)
Query: 298 IGNVTSAR-----NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
G V+S+R N FD+ R+ S+ LL + R E RLF + R + + +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
SVL A + G+ +H K DV + TSL+ Y K R VFD M
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
E+NVV+W ++I GY + ++ L +FM M+ G PN TF L G+ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
++ + ++ + +++L + G +R + L K +++ W +++S
Sbjct: 215 QVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISG 269
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 340/635 (53%), Gaps = 41/635 (6%)
Query: 14 SLSLDKFIKSQKNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEF 73
S + +IK+ N P K++A + T+ DN +P V L++C + F
Sbjct: 93 SFLITSYIKN--NCPADAAKIYA-YMRGTDTEVDNFVIPSV---------LKACCLIPSF 140
Query: 74 ---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKS 130
++H ++ +G D F + ++ + + + S++L+ L FD I+ D +T+++S
Sbjct: 141 LLGQEVHGFVVKNGFHGDVFVCNALIM-MYSEVGSLALARLLFDKIENKDVVSWSTMIRS 199
Query: 131 F---LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV--- 184
+ +L++ L M V+ + + V A + L+ GK +HA ++
Sbjct: 200 YDRSGLLDEALDLL----RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNG 255
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
KCG + + + +LI MY C + AR+VF+ +++W +MI Y+ +
Sbjct: 256 KCG-KSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVR 314
Query: 245 LFDFMPERDIF----TWNSMI-----SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
LF M +F T S++ +G +++G + A L + V++ ID Y
Sbjct: 315 LFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA-TAFIDMY 373
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
K G+V SAR+ FD ++++ W+ +++ Y + E +F M +PNE +++
Sbjct: 374 GKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMV 433
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
S+L CA G +++G+WIHSYI K IK D++L TS + MYA CG +D A +F T++
Sbjct: 434 SLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR 493
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
++ WN+MI G+ MHG GE ALE+F EME G TPND TFI L AC+H+G++ EG F
Sbjct: 494 DISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLF 553
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
M + PKVEHYGCMVDLLGRAGL+ ++ EL+ +PM A++G+ L+AC H N
Sbjct: 554 HKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKN 613
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+LG+ A+ + LEP G VL+SNIYAS +W +V +RR MK++ + K G S +
Sbjct: 614 IKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIE 673
Query: 596 PGEFASESIV--ENCPPHRKCIVYSMLGEIGAQMK 628
E I+ P +K VY M+ E+ +++
Sbjct: 674 VNGLLHEFIMGDREHPDAKK--VYEMIDEMREKLE 706
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 301 VTSARNCFDRMCMRNVVSWN-------ILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
+ ++ NC R+ + + S++ L+ Y++ + +++ M D + +
Sbjct: 67 IKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFV 126
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+ SVL AC + +GQ +H ++ K DV + +L+ MY++ G + LAR +FD +
Sbjct: 127 IPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIE 186
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
K+VVSW++MI Y G ++AL++ +M P++ I +
Sbjct: 187 NKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISI 231
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 257/440 (58%), Gaps = 2/440 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ + G+ AR++F PV D+V+WN+M+ G K+ V A+ +F MP
Sbjct: 128 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 187
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFD 309
R+ +WN+M+SG+ DM AA F P + D V W M+ GY IGNV A F+
Sbjct: 188 VRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFE 247
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVID 368
M +RN+VSWN ++A YV+ + LRLF M+R + +PN ++L SVL C+N+ +
Sbjct: 248 AMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALG 307
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ IH + K + ++ + TSL++MY KCG + A +F M ++VV+WN+MI GY
Sbjct: 308 FGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYA 367
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG G++A+ +F M+ G PN TF+ VL+AC H G+ G F+ MQ +Y IEP+V
Sbjct: 368 QHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRV 427
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY CMVDLL RAG + + +L+ +P E P+ +G LL+AC + N E ++ A L+E
Sbjct: 428 DHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIE 487
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+P+ G YV L+NIYA +WD+V +RR MK+ + K G S + E +
Sbjct: 488 KDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDR 547
Query: 609 PPHRKCIVYSMLGEIGAQMK 628
+ +++ LG++ +MK
Sbjct: 548 LHPQLYLIHEKLGQLAERMK 567
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 148/374 (39%), Gaps = 78/374 (20%)
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK-IGNVTSARNCFDRMCMRNVVSW 319
++ V GD+ A F P + ++NC++ GYA+ +G + AR+ FDR+ + VS+
Sbjct: 73 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSY 132
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI------ 373
N LL+ + D RLF M D S ++++ + G ++ + +
Sbjct: 133 NTLLSCHFASGDADGARRLFASMPVRDV----VSWNTMVSGLSKSGAVEEAKAVFLAMPV 188
Query: 374 ----------------------HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ + K D +L T++++ Y G + A F+
Sbjct: 189 RNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEA 248
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLE 470
M +N+VSWN+++ GY + + AL +F M + PN +T VL C++ +
Sbjct: 249 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 308
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA- 529
G K H CM KLP+ + +L+S
Sbjct: 309 G---------------KQIHQWCM------------------KLPLSRNLTVGTSLVSMY 335
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK-- 587
C S K+ E+ RD + + + YA G E NL MK++ +E
Sbjct: 336 CKCGDLSSACKLFG----EMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNW 391
Query: 588 ----AVGSSLVHPG 597
AV ++ +H G
Sbjct: 392 ITFVAVLTACIHTG 405
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ +V ++ +F+ + + N ++ ++ + AL + + V+ N T
Sbjct: 236 IGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSS 295
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ C+ + +L GK++H +K +L V SL+ MY CG++ A K+F + D
Sbjct: 296 VLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRD 355
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF-TWNSMI--------SGYVDVGD--ME 271
+V WN+MI GY ++ + A LF+ M + + W + + +G D G E
Sbjct: 356 VVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFE 415
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
L+ + P D ++CM+D + G + A
Sbjct: 416 GMQELYGIEPRVD--HYSCMVDLLCRAGKLERA 446
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 273/447 (61%), Gaps = 9/447 (2%)
Query: 191 DLFVRNSLIHMYSVCGEVLDA----RKVFEDGPVW-DLVTWNSMIDG--YVKNREVGFA- 242
D+F+ N+LI Y+ +DA ++ E V+ D+ T+ ++ + + +G A
Sbjct: 99 DIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAI 158
Query: 243 -RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
+F ++ N ++ Y G +E+A +FD P D SWN MI GY K G
Sbjct: 159 HSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVF 218
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
SAR F+ M R+VVSW++++ YV+ + E L LF M+ +PNE+ L++ L+AC
Sbjct: 219 KSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSAC 278
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A++G ++ GQWI Y+++ ++ V L T+L+ MY+KCG ++ A VF M EKNV++W+
Sbjct: 279 AHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWS 338
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+MI G ++GQG+ AL +F +ME +G PN+ TFI +L+AC+H+ +V EG +F M I
Sbjct: 339 AMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSI 398
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y ++P H+ CMVDL GRAG++ ++ ++ +P + A+WGALL+AC H ++ELG+
Sbjct: 399 YGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQ 458
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFAS 601
V + L+EL+P G YVLLSNIYA+ G+WD V LRR+M+E+++ K G S + G+
Sbjct: 459 VGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIH 518
Query: 602 ESIVENCPPHRKCIVYSMLGEIGAQMK 628
E + + + ++Y+ LGE+ ++K
Sbjct: 519 EFVAGDSSHPQLEMIYAKLGEMSQELK 545
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 235/473 (49%), Gaps = 61/473 (12%)
Query: 41 PKFTDTDNQRLPIVDL-----SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRV 95
P ++ NQ P + +PIL+ L SC T+K+ QIH Q + +G+ D+F ASR+
Sbjct: 14 PSQSNLQNQNPPWIPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRI 73
Query: 96 LKKLCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE 154
L S S+ + F I++PD F+ NT+++++ +P A+ FY E + V
Sbjct: 74 LSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVF 133
Query: 155 HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKV 214
+ +TFPLL K C+ I SLR G+ +H+ + K G+ ++ V N L+ MY+ CG + A V
Sbjct: 134 PDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLV 193
Query: 215 FEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
F+ P D +WN MI GY+K AR +F+ MP+RD+ +W+ MI+GYV +
Sbjct: 194 FDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGL 253
Query: 275 GLF-DLM-----PFRDVV----------------SW-----------------NCMIDGY 295
GLF D+M P V+ W +ID Y
Sbjct: 254 GLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMY 313
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+K G+V A F +M +NV++W+ + LA+ + KD L LF +M KPNE
Sbjct: 314 SKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKD---ALNLFSQMEMQGVKPNEV 370
Query: 353 SLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ + +L AC++ ++D G + HS +KP+ ++ +Y + G++D A+ V +
Sbjct: 371 TFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKS 430
Query: 412 MTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
M K N W +++ +HG GE+ + +E++ PN +LS
Sbjct: 431 MPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELD-----PNHGGRYVLLS 478
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 308/571 (53%), Gaps = 20/571 (3%)
Query: 75 QIHTQLLVSGL--SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF- 131
QIH LL S + ++ SR+L++ CT+ + + +Q + ++++ F
Sbjct: 19 QIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFS 78
Query: 132 --LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+ LN L+ Y M V + +TFP L K +R + HA IVK G +
Sbjct: 79 GGITLNRRLSFLA--YRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLD 135
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
D FVRNSLI YS G A ++F+ D+VTW +MIDG+V+N A F M
Sbjct: 136 SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 250 PERDI----FTWNSMISGYVDVGDME---AANGLFDLMPFR---DVVSWNCMIDGYAKIG 299
+ + T S++ V D+ + +GL+ L R DV + ++D Y K
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY-LETGRVKCDVFIGSSLVDMYGKCS 254
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
A+ FD M RNVV+W L+A YV+ + + + + +F+ M++ D PNE +L SVL+
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA++G + G+ +H Y+ K I+ + T+L+ +Y KCG ++ A VF+ + EKNV +
Sbjct: 315 ACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT 374
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W +MI G+ HG A ++F M +PN+ TF+ VLSAC H G+V EG F M+
Sbjct: 375 WTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK 434
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ +EPK +HY CMVDL GR GL+ +++ L+ ++PME +WGAL +C H + ELG
Sbjct: 435 GRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELG 494
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGE 598
K A +++L+P G Y LL+N+Y+ WDEV +R+ MK++++ K+ G S + G+
Sbjct: 495 KYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGK 554
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
++ P +Y L +G QM++
Sbjct: 555 LCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 304/544 (55%), Gaps = 19/544 (3%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ-EPDAFM 123
+ CS+ K Q+HTQ++V+ S + +L K L + S L F I P+ +
Sbjct: 32 KQCSSTKTLQQVHTQMVVN--SSIHTPNNHLLSK-AIHLKNFPYSSLLFSHIAPHPNDYA 88
Query: 124 CNTIMKSFLML--NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
N ++++ N P ALS ++ +MM+ + +++TFP CA + SL H+
Sbjct: 89 FNIMIRALTTTWHNYPL-ALSLFH-RMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHS 146
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+ K D +SLI Y+ CG V ARKVF++ P D V+WNSMI GY K
Sbjct: 147 LLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCARE 206
Query: 242 ARELFDFMPERDIF-----TWNSMISGYVDVGDMEAANGLFDLMPFRDVV--SW--NCMI 292
A E+F M RD F + S++ ++GD+E + + R + S+ + +I
Sbjct: 207 AVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALI 266
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YAK G + SAR FD M R+V++WN +++ Y + E + LF M N+
Sbjct: 267 SMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKI 326
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L +VL+ACA +G +D+G+ I Y + + D+ ++T+L+ MYAK G +D A+ VF +M
Sbjct: 327 TLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDM 386
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEM--EKRGPTPNDATFICVLSACTHAGMVLE 470
+KN SWN+MI HG+ ++AL +F M E G PND TF+ +LSAC HAG+V E
Sbjct: 387 PQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDE 446
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G+ FD+M ++ + PK+EHY CMVDLL RAG + ++ +L+ K+P + GALL AC
Sbjct: 447 GYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGAC 506
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+ N ++G+ V + ++E++P + G Y++ S IYA+ W++ +R +M++K + K G
Sbjct: 507 RSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPG 566
Query: 591 SSLV 594
S +
Sbjct: 567 CSWI 570
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/511 (35%), Positives = 289/511 (56%), Gaps = 18/511 (3%)
Query: 98 KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
+L L S +L D E + F N I+ F+ P FY +KM + V +
Sbjct: 81 QLEIELPSNTLKAGENDPTHEINVFAFNAIISGFITNGFPEEGFEFY-QKMRNEGVMPDK 139
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
+TFP K C + + KK+H + K G ELD+F+ ++L++ Y G + A+ FE+
Sbjct: 140 FTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 196
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAA 273
P+ D+V WN+M++GY + + E F M + + FT +S + +GD+
Sbjct: 197 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNG 256
Query: 274 ---NGLFDLMPFRDVVSW-NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+G M + V+ N +ID Y K + A F+ M +++ SWN +++++ +C
Sbjct: 257 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQC 316
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI------QKCRIK 383
D+ LRL DRM+ +P+ ++ +VL AC+++ + G+ IH Y+ + +
Sbjct: 317 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 376
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
DVLL +++ MYAKCG M A VF+ M+ K+V SWN MIMGYGMHG G +ALEMF M
Sbjct: 377 DDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRM 436
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
+ P++ TF+ VLSAC+HAG V +G + M+ Y + P +EHY C++D+LGRAG
Sbjct: 437 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQ 496
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
+ ++ EL +P+EA P +W ALL+AC H ++ L ++ AQ + ELEP G YVL+SN+
Sbjct: 497 LDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNV 556
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
Y + G+++EV +R M+++ + K G S +
Sbjct: 557 YGAVGRYEEVLEVRHTMRQQNVRKTPGCSWI 587
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 31/405 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
+++C V E +IH L GL D F S L + + + F+ + D +
Sbjct: 146 IKACLDVLEIKKIHGLLFKFGLELDVFIGS-ALVNCYLKFGLMEHAQVAFEELPIRDVVL 204
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + F + + +M + V + +T V A + L G+ +H
Sbjct: 205 WNAMVNGYAQIGQ-FEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFA 263
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G++ + V NSLI MY C + DA ++FE D+ +WNS++ + + +
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 244 ELFDFM----PERDIFTWNSM---------------ISGYVDVGDMEAANGLFDLMPFRD 284
L D M + D+ T ++ I GY+ V + D D
Sbjct: 324 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID-----D 378
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V+ N +ID YAK G++ A F+RM ++V SWNI++ Y E L +F RM
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
KP+E + + VL+AC++ G + G+ ++ K + P + T ++ M + G +D
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 404 LARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
A + M E N V W +++ +H E A + E+E
Sbjct: 499 EAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELE 543
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 257/440 (58%), Gaps = 2/440 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ + G+ AR++F PV D+V+WN+M+ G K+ V A+ +F MP
Sbjct: 79 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFD 309
R+ +WN+M+SG+ DM AA F P + D V W M+ GY IGNV A F+
Sbjct: 139 VRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFE 198
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVID 368
M +RN+VSWN ++A YV+ + LRLF M+R + +PN ++L SVL C+N+ +
Sbjct: 199 AMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALG 258
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ IH + K + ++ + TSL++MY KCG + A +F M ++VV+WN+MI GY
Sbjct: 259 FGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYA 318
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG G++A+ +F M+ G PN TF+ VL+AC H G+ G F+ MQ +Y IEP+V
Sbjct: 319 QHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRV 378
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY CMVDLL RAG + + +L+ +P E P+ +G LL+AC + N E ++ A L+E
Sbjct: 379 DHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIE 438
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+P+ G YV L+NIYA +WD+V +RR MK+ + K G S + E +
Sbjct: 439 KDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDR 498
Query: 609 PPHRKCIVYSMLGEIGAQMK 628
+ +++ LG++ +MK
Sbjct: 499 LHPQLYLIHEKLGQLAERMK 518
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 148/374 (39%), Gaps = 78/374 (20%)
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK-IGNVTSARNCFDRMCMRNVVSW 319
++ V GD+ A F P + ++NC++ GYA+ +G + AR+ FDR+ + VS+
Sbjct: 24 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSY 83
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI------ 373
N LL+ + D RLF M D S ++++ + G ++ + +
Sbjct: 84 NTLLSCHFASGDADGARRLFASMPVRDV----VSWNTMVSGLSKSGAVEEAKAVFLAMPV 139
Query: 374 ----------------------HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ + K D +L T++++ Y G + A F+
Sbjct: 140 RNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEA 199
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLE 470
M +N+VSWN+++ GY + + AL +F M + PN +T VL C++ +
Sbjct: 200 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 259
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA- 529
G K H CM KLP+ + +L+S
Sbjct: 260 G---------------KQIHQWCM------------------KLPLSRNLTVGTSLVSMY 286
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK-- 587
C S K+ E+ RD + + + YA G E NL MK++ +E
Sbjct: 287 CKCGDLSSACKLFG----EMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNW 342
Query: 588 ----AVGSSLVHPG 597
AV ++ +H G
Sbjct: 343 ITFVAVLTACIHTG 356
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ +V ++ +F+ + + N ++ ++ + AL + + V+ N T
Sbjct: 187 IGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSS 246
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ C+ + +L GK++H +K +L V SL+ MY CG++ A K+F + D
Sbjct: 247 VLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRD 306
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF-TWNSMI--------SGYVDVGD--ME 271
+V WN+MI GY ++ + A LF+ M + + W + + +G D G E
Sbjct: 307 VVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFE 366
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
L+ + P D ++CM+D + G + A
Sbjct: 367 GMQELYGIEPRVD--HYSCMVDLLCRAGKLERA 397
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 257/440 (58%), Gaps = 2/440 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D N+L+ + G+ AR++F PV D+V+WN+M+ G K+ V A+ +F MP
Sbjct: 79 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFD 309
R+ +WN+M+SG+ DM AA F P + D V W M+ GY IGNV A F+
Sbjct: 139 VRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFE 198
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVID 368
M +RN+VSWN ++A YV+ + LRLF M+R + +PN ++L SVL C+N+ +
Sbjct: 199 AMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALG 258
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ IH + K + ++ + TSL++MY KCG + A +F M ++VV+WN+MI GY
Sbjct: 259 FGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYA 318
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG G++A+ +F M+ G PN TF+ VL+AC H G+ G F+ MQ +Y IEP+V
Sbjct: 319 QHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRV 378
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY CMVDLL RAG + + +L+ +P E P+ +G LL+AC + N E ++ A L+E
Sbjct: 379 DHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIE 438
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+P+ G YV L+NIYA +WD+V +RR MK+ + K G S + E +
Sbjct: 439 KDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDR 498
Query: 609 PPHRKCIVYSMLGEIGAQMK 628
+ +++ LG++ +MK
Sbjct: 499 LHPQLYLIHEKLGQLAERMK 518
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 148/374 (39%), Gaps = 78/374 (20%)
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK-IGNVTSARNCFDRMCMRNVVSW 319
++ V GD+ A F P + ++NC++ GYA+ +G + AR+ FDR+ + VS+
Sbjct: 24 VAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSY 83
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI------ 373
N LL+ + D RLF M D S ++++ + G ++ + +
Sbjct: 84 NTLLSCHFASGDADGARRLFASMPVRDV----VSWNTMVSGLSKSGAVEEAKAVFLAMPV 139
Query: 374 ----------------------HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ + K D +L T++++ Y G + A F+
Sbjct: 140 RNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEA 199
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLE 470
M +N+VSWN+++ GY + + AL +F M + PN +T VL C++ +
Sbjct: 200 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 259
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA- 529
G K H CM KLP+ + +L+S
Sbjct: 260 G---------------KQIHQWCM------------------KLPLSRNLTVGTSLVSMY 286
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK-- 587
C S K+ E+ RD + + + YA G E NL MK++ +E
Sbjct: 287 CKCGDLSSACKLFG----EMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNW 342
Query: 588 ----AVGSSLVHPG 597
AV ++ +H G
Sbjct: 343 ITFVAVLTACIHTG 356
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ +V ++ +F+ + + N ++ ++ + AL + + V+ N T
Sbjct: 187 IGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSS 246
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ C+ + +L GK++H +K +L V SL+ MY CG++ A K+F + D
Sbjct: 247 VLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRD 306
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF-TWNSMI--------SGYVDVGD--ME 271
+V WN+MI GY ++ + A LF+ M + + W + + +G D G E
Sbjct: 307 VVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFE 366
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
L+ + P D ++CM+D + G + A
Sbjct: 367 GMQELYGIEPRVD--HYSCMVDLLCRAGKLERA 397
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 304/537 (56%), Gaps = 12/537 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C ++ + ++H +L G D + A+ ++ L + +V ++ F + D
Sbjct: 157 LKACLSLADGEKMHCWVLKMGFEHDVYVAASLIH-LYSRFGAVEVAHKVFVDMPVRDVGS 215
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ F + AL ++M + V+ + T + +CA + G VH +
Sbjct: 216 WNAMISGFCQNGNVAEALRVL-DRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYV 274
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----V 239
+K G E D+FV N+LI+MYS G + DA++VF+ V DLV+WNS+I Y +N + +
Sbjct: 275 IKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTAL 334
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF-----RDVVSWNCMIDG 294
GF +E+ D+ T S+ S + + D + + D+V N +++
Sbjct: 335 GFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNM 394
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEAS 353
YAK+G++ AR F+++ R+V+SWN L+ Y + E + ++ M G PN+ +
Sbjct: 395 YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGT 454
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+S+L A +++G + G IH + K + DV ++T L+ MY KCG ++ A ++F +
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP 514
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
++ V WN++I G+HG GEKAL++F +M G + TF+ +LSAC+H+G+V E W
Sbjct: 515 QETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQW 574
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
FD MQ+ Y+I+P ++HYGCMVDL GRAG + + LVS +P++A ++WG LL+AC H
Sbjct: 575 CFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIH 634
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
N+ELG + L+E++ + G YVLLSNIYA+ GKW+ +R + +++ L K G
Sbjct: 635 GNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPG 691
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 255/487 (52%), Gaps = 22/487 (4%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
SC+ + Q+H LLV G +QD ++ L L +L +SLS F IQ + F
Sbjct: 58 FRSCTNINVAKQLHALLLVLGKAQDVVLLTQ-LVTLYATLGDLSLSSTTFKHIQRKNIFS 116
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N+++ +++ ++ E + V + YTFP + K C SL +G+K+H +
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMHCWV 173
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K GFE D++V SLIH+YS G V A KVF D PV D+ +WN+MI G+ +N V A
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233
Query: 244 ELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDG 294
+ D M D T +SM+ D+ L L + DV N +I+
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDV-VGGVLVHLYVIKHGLESDVFVSNALINM 292
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y+K G + A+ FD M +R++VSWN ++A Y + D L F M+ +P+ ++
Sbjct: 293 YSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTV 352
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+S+ + + IG+ +H ++ +CR ++ D+++ +L+ MYAK G +D AR VF+ +
Sbjct: 353 VSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP 412
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEGW 472
++V+SWN++I GY +G +A++ + ME+ R PN T++ +L A +H G + +G
Sbjct: 413 SRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQG- 471
Query: 473 WYFDLMQRIYK--IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
+ R+ K + V C++D+ G+ G + D+ L ++P E W A++S+
Sbjct: 472 --MKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISSL 528
Query: 531 STHSNSE 537
H + E
Sbjct: 529 GIHGHGE 535
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 144/338 (42%), Gaps = 71/338 (21%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
F L+ + C I K++HA ++ G D+ + L+ +Y+ G++ + F+
Sbjct: 54 FNLVFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 220 VWDLVTWNSMIDGYVKNREV--------------GFARELFDFMP--------------- 250
++ +WNSM+ YV+ G + + F P
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMH 170
Query: 251 --------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
E D++ S+I Y G +E A+ +F MP RDV SWN MI G+ + GNV
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
E LR+ DRM + K + ++ S+L CA
Sbjct: 231 -------------------------------EALRVLDRMKTEEVKMDTVTVSSMLPICA 259
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+ G +H Y+ K ++ DV +S +L+ MY+K G + A+ VFD M +++VSWNS
Sbjct: 260 QSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNS 319
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+I Y + AL F EM G P+ T + + S
Sbjct: 320 IIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLAS 357
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
V +C N I++ + +H+ + DV+L T L+T+YA G + L+ F ++ KN
Sbjct: 57 VFRSCTN---INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFME-MEKRGPTPNDATFICVLSAC 462
+ SWNSM+ Y G+ +++ E + G P+ TF VL AC
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC 160
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 254/445 (57%), Gaps = 28/445 (6%)
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM 270
AR +F+ P DL +WN M+ GYV+NR++ AR LF+ MPERDI +WN+M+SGY G +
Sbjct: 14 ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFV 73
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA-------------------------- 304
+ A +F MP ++ +SWN ++ Y + G + A
Sbjct: 74 DEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKR 133
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
RN FD M R+ +SW+ ++A Y + E L F M R + N +S L+ C+N+
Sbjct: 134 RNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNI 193
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
+++G+ +H + K + + +LL MY KCG +D AR+ F + EK+VVSWN+MI
Sbjct: 194 AALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMI 253
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
GY HG GE+AL +F M+ G P+DAT + VL+AC+HAG+V +G YF M R Y I
Sbjct: 254 HGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGI 313
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
K+ HY CMVDLLGRAG + +++ L+ +P E A WGALL A H N+ELG+ AQ
Sbjct: 314 TAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQ 373
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASES 603
+ E+EP + G Y+LLS +YA+ G+W + +R M+ K ++K G S + + +
Sbjct: 374 IIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFK 433
Query: 604 IVENCPPHRKCIVYSMLGEIGAQMK 628
+ + PH I Y+ L E+ ++K
Sbjct: 434 VGDTSHPHTDKI-YTFLEEMDLKLK 457
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 195/432 (45%), Gaps = 100/432 (23%)
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
MI GY++N + AR+LFD MPERD+F+WN M++GYV D++ A LF+ MP RD+VSW
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N M+ GYA+ G V AR F +M ++N +SWN LLA YV+ + RLF+ +
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKM----- 115
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
W L+S + L G + RN+
Sbjct: 116 ----------------------DW-------------TLVSWNCLM----GGFVRKRRNL 136
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT----- 463
FDNM +++ +SW++MI GY +G E+AL F+EM++ N ++F C LS C+
Sbjct: 137 FDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAAL 196
Query: 464 ------HAGMVLEGW---WYF------------------DLMQRIYKIEPKVEHYGCMVD 496
H +V G+ WY D Q I +E V + M+
Sbjct: 197 ELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEI--LEKDVVSWNTMIH 254
Query: 497 LLGRAGLMRDSE---ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
R G ++ EL+ + A ++L+ACS + G +++ + RD
Sbjct: 255 GYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQG---SEYFYSMN-RD 310
Query: 554 PG------PYVLLSNIYASEGKWDEVENLRRIM----KEKELEKAVGSSLVHP----GEF 599
G Y + ++ G+ +E +NL + M +G+S +H GE
Sbjct: 311 YGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 370
Query: 600 ASESIVENCPPH 611
A++ I E PH
Sbjct: 371 AAQIIFE-MEPH 381
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + D+ + ++ + AL F+ E M N +F C+ I
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVE-MQRDCERLNRSSFTCALSTCSNIA 194
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L G+++H R+VK G++ +V N+L+ MY CG + +AR F++ D+V+WN+MI
Sbjct: 195 ALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIH 254
Query: 232 GYVKNREVGFARE---LFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
GY ++ GF E +F+ M I T S+++ G ++ + F M RD
Sbjct: 255 GYARH---GFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMN-RD 310
Query: 285 ------VVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+V + CM+D + G + A+N M + +W LL
Sbjct: 311 YGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLG 357
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 297/570 (52%), Gaps = 23/570 (4%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL--CTSLS 104
D+ P V L+ V++ ++H ++ G D F + +L C L
Sbjct: 40 DDHTFPFV------LKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLR 93
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
FD + E D NT++ F + + + M+ + ++ N T
Sbjct: 94 DAGR---VFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFL 150
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
V + + G++VH ++ G E D+F+ NSLI MY+ G +A VF ++V
Sbjct: 151 PVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVV 210
Query: 225 TWNSMIDGYVKNR----EVGFARELFDFMPERDIFTWNSMIS-----GYVDVGDMEAANG 275
+WN+MI + +NR VG R++ D+ + T+ +++ G V G A
Sbjct: 211 SWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARS 270
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+ F VS N + D YAK G++ ARN FD +R+ VS+NIL+ + + D E
Sbjct: 271 IHMGCAFDLFVS-NALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSES 328
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L LF M K + S M L+ACAN+ I G+ IH ++ + + ++ SLL
Sbjct: 329 LSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDF 388
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG + LARN+FD MT K+V SWN+MI+GYGM G+ + A+++F M K + +F
Sbjct: 389 YTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSF 448
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
I VLSAC+H G++ +G YFD + + IEP HY CMVDLLGRAGLM ++ EL+ LP
Sbjct: 449 IAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLP 507
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+ +WGALL AC + N EL A+HL EL+P G Y LLSN+YA G+WDE
Sbjct: 508 IVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANR 567
Query: 576 LRRIMKEKELEKAVGSSLVHPGEFASESIV 605
+R +MK + ++K+ G S V GE A +V
Sbjct: 568 IRELMKSRGVKKSPGCSWVQIGEQAHAFVV 597
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 221/434 (50%), Gaps = 24/434 (5%)
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
AF+ NT+++ + + G Y +M+ V + +TFP + K CA +R+G++VH
Sbjct: 7 AFLWNTLIRGYSIAG--VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVH 64
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY-VKNREV 239
+VK GFE D+FV N+L+ Y CG + DA +VF++ P DLV+WN+MI + V
Sbjct: 65 GSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHY 124
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDV--------GDMEAANGLFDLMPFRDVVSWNCM 291
A ++F M + + + IS ++ V E + D+ N +
Sbjct: 125 RDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSL 184
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
ID YAK G+ T A N F ++ +NVVSWN ++A + + + + L +M PN
Sbjct: 185 IDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNS 244
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ +VL ACA MG++ G+ IH+ D+ +S +L MYAK G + LARNVFD
Sbjct: 245 VTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT 304
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ ++ VS+N +I+G+ ++L +F EM+ G ++ +F+ LSAC + + +G
Sbjct: 305 -SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQG 363
Query: 472 WWYFD-LMQRIYKIEPKVEHYGCMVDLL---GRAGLMRD------SEELVSKLPMEAGPA 521
L+++++ I V + ++D GR GL R+ ++++ S M G
Sbjct: 364 KEIHGFLLRKLFHIHLFVAN--SLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYG 421
Query: 522 LWGALLSACSTHSN 535
+ G L +A N
Sbjct: 422 MLGELDTAIDLFEN 435
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/383 (42%), Positives = 239/383 (62%), Gaps = 2/383 (0%)
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E D+F +++ Y VG +E A LFD MP R V +WN M+ G+A+ G++ A F
Sbjct: 115 EPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRL 174
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK-PNEASLMSVLTACANMGVIDI 369
M RNVVSW +++ Y R K Y E L LF RM + PN +L S+ A AN+G ++I
Sbjct: 175 MPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEI 234
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE-KNVVSWNSMIMGYG 428
GQ + +Y +K ++ +S ++L MYAKCG +D+A VF+ + +N+ SWNSMIMG
Sbjct: 235 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLA 294
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
+HG+ K L+++ +M G +P+D TF+ +L ACTH GMV +G F M + I PK+
Sbjct: 295 VHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKL 354
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHYGCMVDLLGRAG +R++ E++ ++PM+ +WGALL ACS H N EL +I A+ L
Sbjct: 355 EHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFA 414
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
LEP +PG YV+LSNIYAS G+WD V LR++MK ++ K+ G S + G + IVE+
Sbjct: 415 LEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVEDR 474
Query: 609 PPHRKCIVYSMLGEIGAQMKMCR 631
++++L + +K+ R
Sbjct: 475 SHPESNEIFALLDGVYEMIKLNR 497
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 193/429 (44%), Gaps = 59/429 (13%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+++ QIH L +G+ Q +++L + + ++ + +P F+ N +++
Sbjct: 1 MRQVKQIHGYTLRNGIDQ-----TKILIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQ 55
Query: 130 SFLML-NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
++ S Y + ++ F+ N +TF L C + S G+ +H +K GF
Sbjct: 56 AYSSHPQHQHQCFSLYSQMLLHSFLP-NQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGF 114
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E DLF +L+ MY+ G + ARK+F+ PV + TWN+M+ G+ + ++ A ELF
Sbjct: 115 EPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRL 174
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLF-------DLMP-------------------- 281
MP R++ +W +MISGY A GLF +MP
Sbjct: 175 MPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEI 234
Query: 282 -------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRM-CMRNVVSWNIL---LA 324
F+++ N +++ YAK G + A F+ + +RN+ SWN + LA
Sbjct: 235 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLA 294
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIK 383
++ C C+ L+L+D+M+ P++ + + +L AC + G+++ G+ I S I
Sbjct: 295 VHGEC---CKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNII 351
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEM 439
P + ++ + + G + A V M K + V W +++ H E A E
Sbjct: 352 PKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAES 411
Query: 440 FMEMEKRGP 448
+E P
Sbjct: 412 LFALEPWNP 420
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/418 (38%), Positives = 252/418 (60%), Gaps = 32/418 (7%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H+ V+ G D+++ N+ + Y +V A ++F D +++
Sbjct: 98 LHSFAVRLGHAGDVYIVNAAVSAYFTAADVASAERLFSD-----------------TSKD 140
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
V D+ TW +M++G+ GD+E A FD MP R+VVSWN M+ YA
Sbjct: 141 VA------------DVVTWTTMVAGHARAGDVERARWFFDAMPERNVVSWNAMLGAYASA 188
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE-CLRLFDRMIRGDAKPNEASLMSV 357
G ++ AR FD M RN +W+ ++ V+ D+CE LR+F M+ PNE+ L+SV
Sbjct: 189 GMLSEARKLFDGMHSRNAATWSSMVTGLVQ-SDHCEEALRVFSDMVARGVVPNESILVSV 247
Query: 358 LTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
++ACA + ++ G W+H+Y+++ V+L+T+++ MY KCG + A VF M +N
Sbjct: 248 ISACAQLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIRVFAAMPVRN 307
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+ SWNSMI G M+G+ +AL +F +M+ G PND TFI +L AC+H+G+V EG W F+
Sbjct: 308 IYSWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSGLVDEGRWLFN 367
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M + I+P EHYG MVDLLGRAGL++++ + V +P+E P LWGAL AC+ H
Sbjct: 368 RMVNDFGIQPVPEHYGLMVDLLGRAGLVKEAVDFVKNMPVEPHPGLWGALAGACNIHGEV 427
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
ELG+ +A+ L+ELEPR Y+LLSNIY + +W+++ +RR++KE+++ K G+++V
Sbjct: 428 ELGEEIAKKLIELEPRHGSRYILLSNIYGTSSRWEDMATVRRLIKERKVSKGTGNAVV 485
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDG+ +A ++++ + + AL + + M+A+ V N + CA +R
Sbjct: 197 LFDGMHSRNAATWSSMVTGLVQSDHCEEALRVFSD-MVARGVVPNESILVSVISACAQLR 255
Query: 172 SLREGKKVHARIVK-CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SL G VHA + + + + + +++ MY CG + +A +VF PV ++ +WNSMI
Sbjct: 256 SLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIRVFAAMPVRNIYSWNSMI 315
Query: 231 DGYVKNREVGFARELF 246
G N A LF
Sbjct: 316 TGLAMNGREMQALSLF 331
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 220/335 (65%), Gaps = 1/335 (0%)
Query: 259 SMISGYVDVGDMEAANGLFD-LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
S++ Y G + +A +FD + DVVSWN MIDGY K G++ AR FD M RNVV
Sbjct: 111 SLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKSGDLARARELFDVMPGRNVV 170
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SW +++ Y + K E + +F RM +P+ +L+SVL+AC ++GV+D+G+W+H ++
Sbjct: 171 SWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFV 230
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ + ++ L +++ MY KCG + A VF+ M +K++V+W +MI G+ +HG G +A+
Sbjct: 231 LRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGSEAV 290
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
E+F MEK +PND TF+ VLS C+H G+ G WYF M YKI+P+VEHYGCM+DL
Sbjct: 291 ELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDL 350
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG + ++ L+ +P +A A+WGALL+A TH ++ELG+ HL+ELEP + G Y
Sbjct: 351 LGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHNSGNY 410
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+LLSNIYA + +WD V LR M+++ L G+S
Sbjct: 411 ILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 445
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 152/312 (48%), Gaps = 45/312 (14%)
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW-DLVTWNSMIDGYVKN 236
++H+ +V+ G D SL+ Y CG V AR+VF++ + D+V+WN MIDGYVK+
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR------------- 283
++ ARELFD MP R++ +W +I Y + E A +F M
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 284 ---------DVVSW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
D+ W N +ID Y K G+V A F+ M +++V
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW-IHSY 376
+W ++A + E + LF RM + + PN+ + ++VL+ C+++G+ D+G+W +
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 331
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ--- 432
+ + +IKP V ++ + + G + AR + +M K N W +++ HG
Sbjct: 332 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 391
Query: 433 GEKALEMFMEME 444
GE+AL +E+E
Sbjct: 392 GEQALLHLIELE 403
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 116/290 (40%), Gaps = 40/290 (13%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H+ L+ +G + D A++ +++ C+ S S +F + D N ++ ++
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 135 NDPFGALSFY------------------------------YEKMMAKFVEHNHYTFPLLG 164
D A + + +M + +E + +
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
C + + G+ VH +++ G ++ + N++I MY CG V A +VFE +V
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM 280
TW +MI G+ + A ELF M + ++ T+ +++S VG + F M
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 331
Query: 281 PFR-----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ V + CMID + G + AR M + N W LLA
Sbjct: 332 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLA 381
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 247/387 (63%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G + DAR +F+ P ++V++ +M+DG + EV ARELFD MP R++ +W +MISGYV
Sbjct: 124 GSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYV 183
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
D +E A LF+ MP ++VV+ MI GY K G++ +AR FD + ++V+SWN +++
Sbjct: 184 DNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISG 243
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
YV E +L+ M+R KP++A+L+++LTAC+++ ++ G+ H+ + K ++
Sbjct: 244 YVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESS 303
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+ + +L+TMY+KCG +D + VF ++ +++VSWN++I Y HG+ +K + +F EME
Sbjct: 304 ISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMEL 363
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G PND TF+ +LSAC HAG V E FDLM Y I P+ EHY C+VD+L RAG +
Sbjct: 364 CGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLE 423
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+ + ++P EA +WG LL A TH N +LG++ A+ L+ + G YV+LSNIYA
Sbjct: 424 KACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYA 483
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSS 592
+ G W EV +R MKEK ++K G S
Sbjct: 484 AAGMWGEVNRVRSQMKEKGVKKQPGHS 510
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDGI+ D N I+ ++ N + Y M+ + ++ + T L C+ +
Sbjct: 225 LFDGIRAKDVISWNAIISGYVH-NGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLA 283
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
LR+G+ HA ++K E + + N+L+ MYS CG V ++ VF D+V+WN++I
Sbjct: 284 LLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIA 343
Query: 232 GYVKNREVGFARELFDFMP-----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
Y ++ LF M DI T+ SM+S G ++ + LFDLM + +
Sbjct: 344 AYAQHGRYQKVIALFHEMELCGLIPNDI-TFLSMLSACGHAGRVDESLKLFDLMFSKYAI 402
Query: 287 S-----WNCMIDGYAKIGNVTSA 304
S + C++D ++ G + A
Sbjct: 403 SPRAEHYACIVDILSRAGQLEKA 425
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 123/268 (45%), Gaps = 17/268 (6%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++ ++I Y G++ +AR++F+ D+++WN++I GYV N A +L+
Sbjct: 200 EKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYII 259
Query: 249 MPER----DIFTWNSMISGYVDVGDMEAANG----LFDLMPFRDVVSWNCMIDGYAKIGN 300
M D T ++++ + + + M + N ++ Y+K GN
Sbjct: 260 MLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGN 319
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
V + F + +++VSWN ++A Y + Y + + LF M PN+ + +S+L+A
Sbjct: 320 VDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSA 379
Query: 361 CANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM---TEKN 416
C + G +D + + K I P ++ + ++ G ++ A + M EKN
Sbjct: 380 CGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKN 439
Query: 417 VVSWNSMIMGYGMHGQ---GEKALEMFM 441
V W +++ HG GE A +M +
Sbjct: 440 V--WGTLLCASQTHGNVQLGELAAKMLV 465
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL-ALYVRCKDYCECLR 337
L R +V N I A+ G+V +AR FD M R+ VSWN LL AL+ +D
Sbjct: 10 LASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARS 69
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LFD M N S S++ C G D+ + + R +V ++L
Sbjct: 70 LFDDM----PSRNVISWNSIIAGCLAHG--DLAAASAYFARAPR--RNVASWNAMLAGLV 121
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
+ G M+ AR++FD M E+NVVS+ +M+ G G+ A E+F M PT N ++
Sbjct: 122 RLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAM----PTRNLVSWAA 177
Query: 458 VLSACTHAGMVLEGWWYFDLM 478
++S M+ E F+ M
Sbjct: 178 MISGYVDNNMLEEARKLFEAM 198
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 259/472 (54%), Gaps = 40/472 (8%)
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ E KK+HA IVK F+ ++ + V A +F+ ++ ++N++I
Sbjct: 20 IAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLENPNVFSYNAIIRT 79
Query: 233 YVKNREVGFARELFD----------------------------------------FMPER 252
Y N + A +F+ F P+
Sbjct: 80 YTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKT 139
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
T N++I Y GDM A +++ M RD VSWN +I G+ ++G + SAR FD M
Sbjct: 140 HAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEMP 199
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
R +VSW ++ Y R Y + L +F M +P+E S++SVL ACA +G +++G+W
Sbjct: 200 CRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKW 259
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IH Y +K + + +L+ MYAKCG +D A +F+ M EK+V+SW++MI G HG+
Sbjct: 260 IHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGK 319
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G A+ +F +M+K G TPN TF+ VLSAC HAG+ EG YFD+M+ Y +EP++EHYG
Sbjct: 320 GYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYG 379
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VDLLGR+G + + + + K+PM+ W +LLS+C H N E+ + + L++LEP
Sbjct: 380 CLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIAVVAMEQLLKLEPE 439
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESI 604
+ G YVLL+NIYA KW+ V N+R++++ K ++K G SL+ E +
Sbjct: 440 ESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVNNLVQEFV 491
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 211/439 (48%), Gaps = 42/439 (9%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
+ + +L + + L +C + E +IH ++ LSQ +F +++L LC +LS V +
Sbjct: 1 MGVRELENRFVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLD-LCDNLSHVDYAT 59
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ F ++ P+ F N I++++ + A++ + + + K + +TFP + K CAG+
Sbjct: 60 MIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGL 119
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
R G++VHA + K G + N+LI MY+ CG++ A +V+E+ D V+WNS+I
Sbjct: 120 LCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLI 179
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP--------- 281
G+V+ ++ ARE+FD MP R I +W +MI+GY G A G+F M
Sbjct: 180 SGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEI 239
Query: 282 ------------------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
++ +N +++ YAK G + A F++M
Sbjct: 240 SVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQM 299
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
++V+SW+ ++ +R+F+ M + PN + + VL+ACA+ G+ + G
Sbjct: 300 IEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGL 359
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGM 429
++ ++P + L+ + + G ++ A + M + + +WNS++ +
Sbjct: 360 RYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRI 419
Query: 430 HGQGEKALEMFMEMEKRGP 448
H E A+ ++ K P
Sbjct: 420 HHNLEIAVVAMEQLLKLEP 438
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 299/542 (55%), Gaps = 13/542 (2%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+++ + Q+H+ L +G+S D +L L V +++ F+ +
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD-LYVKCGDVETALVIFNSSDRTN 309
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N ++ +F +ND + + + M A + N +T+P + + C R + G+++H
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ VK GFE D++V LI MYS G + AR+V E D+V+W SMI GYV++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 241 FARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
A F M + I+ N S ISG + M + + DV WN ++
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+ YA+ G + A + F+ + ++ ++WN L++ + + + E L++F RM + K N
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +S L+A AN+ I G+ IH+ + K + + +L+++Y KCG + A+ F M
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+E+N VSWN++I HG+G +AL++F +M+K G PND TFI VL+AC+H G+V EG
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M Y I P+ +HY C++D+ GRAG + +++ + ++P+ A +W LLSAC
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N E+G+ A+HL+ELEP D YVLLSN YA KW + +R++M+++ + K G S
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Query: 593 LV 594
+
Sbjct: 789 WI 790
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 199/428 (46%), Gaps = 38/428 (8%)
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR-EGKK------VH 180
+ FL DP LS + +K H L CA +R+ R G++ +H
Sbjct: 13 LAGFLAHEDPAKVLSLFADKA------RQHGGLGPLDFACA-LRACRGNGRRWQVVPEIH 65
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---- 236
A+ V G V N LI +YS G VL AR+VFE+ D V+W +M+ GY +N
Sbjct: 66 AKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE 125
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCM 291
+G R++ + +S++S ++ A L ++ ++ N +
Sbjct: 126 EALGLYRQMHRAGVVPTPYVLSSVLSSCTKA-ELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I Y + G+ A F M R+ V++N L++ + +C L +F+ M P+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
++ S+L ACA++G + G +HSY+ K I D ++ SLL +Y KCG ++ A +F++
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
NVV WN M++ +G K+ E+F +M+ G PN T+ C+L CT +
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI--- 361
Query: 472 WWYFDLMQRIYKIEPKV----EHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
DL ++I+ + K + Y G ++D+ + G + + ++ L E W +
Sbjct: 362 ----DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTS 416
Query: 526 LLSACSTH 533
+++ H
Sbjct: 417 MIAGYVQH 424
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 299/542 (55%), Gaps = 13/542 (2%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+++ + Q+H+ L +G+S D +L L V +++ F+ +
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD-LYVKCGDVETALVIFNSSDRTN 309
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N ++ +F +ND + + + M A + N +T+P + + C R + G+++H
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ VK GFE D++V LI MYS G + AR+V E D+V+W SMI GYV++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 241 FARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
A F M + I+ N S ISG + M + + DV WN ++
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+ YA+ G + A + F+ + ++ ++WN L++ + + + E L++F RM + K N
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +S L+A AN+ I G+ IH+ + K + + +L+++Y KCG + A+ F M
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+E+N VSWN++I HG+G +AL++F +M+K G PND TFI VL+AC+H G+V EG
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M Y I P+ +HY C++D+ GRAG + +++ + ++P+ A +W LLSAC
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N E+G+ A+HL+ELEP D YVLLSN YA KW + +R++M+++ + K G S
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Query: 593 LV 594
+
Sbjct: 789 WI 790
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 199/428 (46%), Gaps = 38/428 (8%)
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR-EGKK------VH 180
+ FL DP LS + +K H L CA +R+ R G++ +H
Sbjct: 13 LAGFLAHEDPAKVLSLFADKA------RQHGGLGPLDFACA-LRACRGNGRRWQVVPEIH 65
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---- 236
A+ V G V N LI +YS G VL AR+VFE+ D V+W +M+ GY +N
Sbjct: 66 AKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE 125
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCM 291
+G R++ + +S++S ++ A L ++ ++ N +
Sbjct: 126 EALGLYRQMHRAGVVPTPYVLSSVLSSCTKA-ELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I Y + G+ A F M R+ V++N L++ + +C L +F+ M P+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
++ S+L ACA++G + G +HSY+ K I D ++ SLL +Y KCG ++ A +F++
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
NVV WN M++ +G K+ E+F +M+ G PN T+ C+L CT +
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI--- 361
Query: 472 WWYFDLMQRIYKIEPKV----EHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
DL ++I+ + K + Y G ++D+ + G + + ++ L E W +
Sbjct: 362 ----DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTS 416
Query: 526 LLSACSTH 533
+++ H
Sbjct: 417 MIAGYVQH 424
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 204/628 (32%), Positives = 319/628 (50%), Gaps = 86/628 (13%)
Query: 49 QRLPIVD-LSHPILQKLESCS-TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV 106
Q L ++D + H IL L S + ++ + Q H +L +GL D+ A+++L ++
Sbjct: 6 QALALLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFA 65
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+ L D + EP+ F +T++ +F + ALS + +M+ + + ++ P K
Sbjct: 66 D-ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALS-TFSQMLTRGLMPDNRVLPSAVKA 123
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-----DGPVW 221
CAG+ +L+ ++VH GF+ D FV++SL+HMY C ++ DA +VF+ D W
Sbjct: 124 CAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSW 183
Query: 222 ------------------------------DLVTWNSMIDGYVKNREVGFARELFDFMP- 250
+L++WN MI G+ N ++ + F+
Sbjct: 184 SALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGF--NHSGLYSEAVLMFLDM 241
Query: 251 -----ERDIFTWNS---------------MISGYVD----VGDMEAANGL---------- 276
E D T +S +I GYV V D ++ L
Sbjct: 242 HLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCT 301
Query: 277 ------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF----DRMCMRNVVSWNILLALY 326
FD M DV S N I G ++ G V S+ F D+ NVVSW ++A
Sbjct: 302 SEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACC 361
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ E L LF M KPN ++ +L AC N+ + G+ H + + I DV
Sbjct: 362 SQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDV 421
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
+ ++L+ MYAKCG + +R FD + KN+V WN++I GY MHG+ ++A+E+F M++
Sbjct: 422 YVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRS 481
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G P+ +F CVLSAC+ +G+ EG +YF+ M Y IE +VEHY CMV LL RAG +
Sbjct: 482 GQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQ 541
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ ++ ++P+ +WGALLS+C H+N LG++ A+ L ELEP +PG Y+LLSNIYAS
Sbjct: 542 AYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYAS 601
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLV 594
+G W+EV +R +MK K L K G S +
Sbjct: 602 KGMWNEVNRVRDMMKNKGLRKNPGCSWI 629
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 297/547 (54%), Gaps = 25/547 (4%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L CS K +H +L +G D F ++ VL + + + FD + E +
Sbjct: 10 LHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLN-MYAKCGHTTFARQVFDEMFEKN 68
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ ++ + +P A+ Y + F+ N Y F + CA + ++ G+K+H
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYSQM----FLVPNEYVFASVISACASLSAVTLGQKIH 124
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+R +K G+E FV NSLI MY C + DA VF + P + V++N++I G+V+N+++
Sbjct: 125 SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLE 184
Query: 241 FARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSW 288
E F M ++ D F + ++ +++ L D PF
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG---- 240
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDA 347
N +I Y+++ + A F + ++V+SWN L+A C D+ + LR+F M +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P++ + S L ACA + + G+ IH+++ + R+ D+ + +L+ MYAKCG + A +
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F M N+VSWN++I G+G HG GE+A+E+F +M G P+ TFI +L+AC HAG+
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V +G YF+ M+ Y I P +EH+ C++D+LGRAG + ++EE + K P P + +LL
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SA H + +G+ +A+ L++L+P PYVLLSN+YAS+G WD V R+ +K L+K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540
Query: 588 AVGSSLV 594
G SL+
Sbjct: 541 EPGHSLI 547
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L S+L C+ + G +H+ + K + DV +S +L MYAKCG AR VFD M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
EKN+VSW++MI GY G+ + A++++ +M PN+ F V+SAC V G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLG 120
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/491 (35%), Positives = 267/491 (54%), Gaps = 47/491 (9%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N Y L K C I L KK+HA +VK F+ ++ G V A +F
Sbjct: 11 NRYITSL--KNCFKITQL---KKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLF 65
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELF---------DFMPERDIF----------- 255
+ ++ T+N++I Y NR A +F P++ F
Sbjct: 66 KQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGIL 125
Query: 256 ----------------------TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
T N++I Y GD+ A +F+ M RDV+SWN +I
Sbjct: 126 CHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIF 185
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
GY K+G + SAR FD M +R +VSW ++ Y R Y + L +F M +P+E S
Sbjct: 186 GYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEIS 245
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+++VL ACA +G +++G+WIH Y K + +L+ MYAKCG +D A N+FD +
Sbjct: 246 IIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLV 305
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
EK+V+SW++MI G HG+G +A+++F EM K PN+ TF+ VL AC+H G+ EG
Sbjct: 306 EKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLK 365
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
YFD+M Y IEP++EHYGC++DLLGR+G + + + +SK+P++ +W +LLS+C H
Sbjct: 366 YFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIH 425
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N ++ I + LMELEP + G YVLL+N+YA GKW++V N+R++++ K ++K GSS
Sbjct: 426 RNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSS 485
Query: 594 VHPGEFASESI 604
+ E +
Sbjct: 486 IEVNNVVQEFV 496
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 208/438 (47%), Gaps = 47/438 (10%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
I +L + + L++C + + +IH ++ LSQ +F +++L C +L VS + L
Sbjct: 6 IRELENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDS-CDNLGHVSYATLL 64
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMM--AKFVEHNHYTFPLLGKVCAGI 170
F + P+ F N I++++ A+S + + + V + +TFP + K C GI
Sbjct: 65 FKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGI 124
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
R G +VH + K G + N+LI MY+ G++ +A KVFE+ D+++WNS+I
Sbjct: 125 LCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLI 184
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF-------- 282
GYVK ++ ARELFD MP R I +W +MI+GY +G A +F M
Sbjct: 185 FGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEI 244
Query: 283 --------------RDVVSW-----------------NCMIDGYAKIGNVTSARNCFDRM 311
+V W N +I+ YAK G + A N FD++
Sbjct: 245 SIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQL 304
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
++V+SW+ ++ E ++LF+ M + PNE + + VL AC++ G+ D G
Sbjct: 305 VEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGL 364
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGM 429
++ I+P++ L+ + + G + A + M K + WNS++ +
Sbjct: 365 KYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRI 424
Query: 430 HGQGE---KALEMFMEME 444
H + A++ ME+E
Sbjct: 425 HRNLQIAVIAVKQLMELE 442
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 297/547 (54%), Gaps = 25/547 (4%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L CS K +H +L +G D F ++ VL + + + FD + E +
Sbjct: 10 LHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLN-MYAKCGHTTFARQVFDEMFEKN 68
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ ++ + +P A+ Y + F+ N Y F + CA + ++ G+K+H
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYSQM----FLVPNEYVFASVISACASLSAVTLGQKIH 124
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+R +K G+E FV NSLI MY C + DA VF + P + V++N++I G+V+N+++
Sbjct: 125 SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLE 184
Query: 241 FARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSW 288
E F M ++ D F + ++ +++ L D PF
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG---- 240
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDA 347
N +I Y+++ + A F + ++V+SWN L+A C D+ + LR+F M +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P++ + S L ACA + + G+ IH+++ + R+ D+ + +L+ MYAKCG + A +
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F M N+VSWN++I G+G HG GE+A+E+F +M G P+ TFI +L+AC HAG+
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V +G YF+ M+ Y I P +EH+ C++D+LGRAG + ++EE + K P P + +LL
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SA H + +G+ +A+ L++L+P PYVLLSN+YAS+G WD V R+ +K L+K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540
Query: 588 AVGSSLV 594
G SL+
Sbjct: 541 EPGHSLI 547
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L S+L C+ + G +H+ + K + DV +S +L MYAKCG AR VFD M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
EKN+VSW++MI GY G+ + A++++ +M PN+ F V+SAC V G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLG 120
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 270/510 (52%), Gaps = 40/510 (7%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+ L ++C +R+L EG KVHA GF + + N ++ MY C +++A+++F++
Sbjct: 91 TYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEM 150
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
DL +WN MI GY K + AR+LFD M ERD F+W +M SGYV E A LF
Sbjct: 151 AERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFR 210
Query: 279 LMP----FR------------------------------------DVVSWNCMIDGYAKI 298
M F+ D V W+ + D Y K
Sbjct: 211 AMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKC 270
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G++ AR+ FD+ R+VVSW ++ Y + E LF +++ PNE + VL
Sbjct: 271 GSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVL 330
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
ACA+ ++G+ +H Y+ + P +++L+ MY KCG + AR VF+ M ++V
Sbjct: 331 NACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLV 390
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW S+I GY +GQ ++AL+ F + K G P+ TF+ VLSACTHAG+V +G YFD +
Sbjct: 391 SWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSI 450
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ + + +HY C++DLL R+G ++++E+++ K+P+E LW +LL C H N +L
Sbjct: 451 KEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKL 510
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
K A+ L E+EP +P Y L+NIYA+ G W V +R++M + + K G S +
Sbjct: 511 AKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKR 570
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+V + + ++ LG++ +MK
Sbjct: 571 EVHVFLVGDTSHAKSKEIHEFLGKLSKRMK 600
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 175/375 (46%), Gaps = 29/375 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D F + ++ + AL + + + N +T A I+
Sbjct: 177 LFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQ 236
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SL GK++H I++ G +LD V ++L MY CG + +AR +F+ D+V+W +MID
Sbjct: 237 SLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMID 296
Query: 232 GYVKN--REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL------------F 277
Y K RE GFA LF + + I+ SG ++ AA L F
Sbjct: 297 RYFKEGRREEGFA--LFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGF 354
Query: 278 DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
D F + + ++ Y K GN+ +AR F+ M ++VSW L++ Y + E L+
Sbjct: 355 DPSSF----AASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQ 410
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMY 396
F+ +++ +P+ + + VL+AC + G++D G ++ S +K + L+ +
Sbjct: 411 FFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLL 470
Query: 397 AKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPND 452
++ G + A ++ D M E + W S++ G +HG ++A E E+E P
Sbjct: 471 SRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENP---- 526
Query: 453 ATFICVLSACTHAGM 467
AT+ + + AG+
Sbjct: 527 ATYTTLANIYATAGL 541
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH +L GL D S L + S+ + FD + D ++ +
Sbjct: 243 EIHGHILRIGLDLDGVVWS-ALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKE 301
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ + + ++ + N +TF + CA + GK+VH + + GF+ F
Sbjct: 302 GRREEGFALFSD-LLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFA 360
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----P 250
++L+HMY+ CG + +AR+VF P DLV+W S+I GY +N + A + F+ +
Sbjct: 361 ASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGT 420
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS-----WNCMIDGYAKIGNVTSAR 305
+ D T+ ++S G ++ FD + + ++ + C+ID ++ G + A
Sbjct: 421 QPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAE 480
Query: 306 NCFDRM 311
+ D+M
Sbjct: 481 DIIDKM 486
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 310 RMCMRNVVSWNILLALYVRC--KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
R+C N N A+ + C K E +++ D + R P+ A+ ++L C + +
Sbjct: 54 RLCKDN----NFKEAIDILCEQKRLREAIQILDHVDR----PSAATYSTLLQLCLQLRAL 105
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D G +H++ + P V++S +L MY KC + A+ +FD M E+++ SWN MI GY
Sbjct: 106 DEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGY 165
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
G+ ++A ++F +M +R ++ ++ + S E F MQR
Sbjct: 166 AKAGRLQEARKLFDQMTER----DNFSWTAMTSGYVRHDQHEEALELFRAMQR 214
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 309/583 (53%), Gaps = 21/583 (3%)
Query: 61 LQKLESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
L L +C+ + IH +L SG+ + A+ L + S+ + F+G +
Sbjct: 490 LHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLAN-ALMNMYRRCGSIMEAQNVFEGTR 548
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
D N+++ A + E M + +E + TF + C +L G+
Sbjct: 549 ARDIISWNSMIAGHAQHGSYEAAYKLFLE-MKKEGLEPDKITFASVLVGCKNPEALELGR 607
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H I++ G +LD+ + N+LI+MY CG + DA +VF ++++W +MI G+
Sbjct: 608 QIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQG 667
Query: 238 EVGFARELF------DFMPERDIFTW---NSMISGYVDVGDMEAA---NGLFDLMPFRDV 285
E A ELF F P + F+ M S +D G A N ++L D
Sbjct: 668 EDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL----DT 723
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
N +I Y+K G++T AR FD+M R+++SWN ++A Y + L+ +M
Sbjct: 724 GVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQ 783
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
N+ S +S+L AC++ ++ G+ +H+ I K +++ DV + +L++MYAKCG ++ A
Sbjct: 784 GVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEA 843
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+ VFDN TEKNVV+WN+MI Y HG KAL+ F M+K G P+ +TF +LSAC H+
Sbjct: 844 QEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHS 903
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V+EG F ++ + + P +EHYGC+V LLGRAG +++E L++++P A+W
Sbjct: 904 GLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWET 963
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LL AC H N L + A + ++L R+P YVLLSN+YA+ G+WD+V +RR+M+ + +
Sbjct: 964 LLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGI 1023
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
K G S + E I + +Y L + +M+
Sbjct: 1024 RKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEME 1066
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 215/449 (47%), Gaps = 28/449 (6%)
Query: 36 ANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRV 95
A +P+P T+ R VDL +K ++ E +IH Q++ +G+ D F S +
Sbjct: 72 AYQPRP----TETNRAAYVDLVQNCTRK----RSLAEAKRIHAQMVEAGVGPDIFL-SNL 122
Query: 96 LKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH 155
L + SVS + F + D N+++ + A + E A F+
Sbjct: 123 LINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIP- 181
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ T+ + C L GKK+H++I++ G++ D V+NSL++MY C ++ AR+VF
Sbjct: 182 SKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF 241
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PER-------DIFTWNSMIS 262
D+V++N+M+ Y + V LF M P++ D FT SM+
Sbjct: 242 SGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLD 301
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
+ + GL D+ + + + G+V A+ + R+VV +N L
Sbjct: 302 EGKRIHKLAVNEGLNS-----DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNAL 356
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+A + Y E + +M N + +SVL AC+ + G+ IHS+I +
Sbjct: 357 IAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH 416
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
DV + SL++MYA+CG + AR +F+ M +++++SWN++I GY +A++++ +
Sbjct: 417 SSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQ 476
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEG 471
M+ G P TF+ +LSACT++ +G
Sbjct: 477 MQSEGVKPGRVTFLHLLSACTNSSAYSDG 505
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 196/415 (47%), Gaps = 23/415 (5%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQE 118
L +C + E +IH++++ +G +D + +L C L S F GI
Sbjct: 190 LTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQ---VFSGIYR 246
Query: 119 PDAFMCNTIMKSFLM---LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
D NT++ + + + G + +M ++ + + T+ L L E
Sbjct: 247 RDVVSYNTMLGLYAQKAYVEECIG----LFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK++H V G D+ V +L M+ CG+V A++ E D+V +N++I +
Sbjct: 303 GKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQ 362
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR--------DVVS 287
+ A E + M + + ++ A G +L+ DV
Sbjct: 363 HGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQI 422
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
N +I YA+ G++ AR F+ M R+++SWN ++A Y R +D E ++L+ +M
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGV 482
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP + + +L+AC N G+ IH I + IK + L+ +L+ MY +CG + A+N
Sbjct: 483 KPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQN 542
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
VF+ ++++SWNSMI G+ HG E A ++F+EM+K G P+ TF VL C
Sbjct: 543 VFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGC 597
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 303/578 (52%), Gaps = 54/578 (9%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAA-SRVLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
L +CS++ + +IH ++ SGL DSF + + L + SV + F +Q D
Sbjct: 117 LGACSSLAQGREIHNRVFYSGL--DSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET 174
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS---LREGKKV 179
N ++ + D GAL + E M ++ N T+ V +G + L EG+K+
Sbjct: 175 SWNAVILAHSQSGDWSGALRIFKE--MKCDMKPNSTTYI---NVISGFSTPEVLPEGRKI 229
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA IV GF+ DL V +LI+MY CG +AR+VF+ D+V+WN MI YV+N +
Sbjct: 230 HAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDF 289
Query: 240 -------------GFARELFDFMP--------------------------ERDIFTWNSM 260
GF R F+ + ++ ++
Sbjct: 290 HEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATAL 349
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG---NVTSARNCFDRMCMRNVV 317
++ Y G +E A +F+ M RD V+W+ +I YA G + AR FDR+ R+ +
Sbjct: 350 VNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSY 376
WN ++ YV+ +++F M KP+ + ++VL ACA++G + + +H+
Sbjct: 410 CWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I + ++ +V+++ +L+ MYA+CG ++ A +F EK VVSW +M+ + +G+ +A
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L++F EM+ G P+D T+ +L CTH G + +GW YF M ++ + P +H+ MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVD 589
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGR+G + D++EL+ +P E P W L+AC H ELG+ A+ + EL+P P
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
Y+ +SNIYA+ G W++V ++R+ M+E+ L+K G S +
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFI 687
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 139/556 (25%), Positives = 260/556 (46%), Gaps = 66/556 (11%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQ 117
+L SC V E +H ++ S +D+ + ++ C SL + SV +
Sbjct: 13 VLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD-ARSVFESMDWR 71
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ + N ++ ++ AL Y+ +M + + +H TF + C+ SL +G+
Sbjct: 72 QRNVVSWNAMIAAYAQNGHSTEALVLYW-RMNLQGLGTDHVTFVSVLGACS---SLAQGR 127
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H R+ G + + N+L+ MY+ G V DA+++F+ D +WN++I + ++
Sbjct: 128 EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 238 EVGFARELFDFMP---ERDIFTWNSMISGYV---------DVGDMEAANGLFDLMPFRDV 285
+ A +F M + + T+ ++ISG+ + ANG FD D+
Sbjct: 188 DWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG-FD----SDL 242
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
V +I+ Y K G+ AR FD+M R++VSWN+++ YV+ D+ E L L+ ++
Sbjct: 243 VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDME 302
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
K +A+ +S+L AC+++ + G+ +HS+I + + +V ++T+L+ MYAKCG ++ A
Sbjct: 303 GFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEA 362
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGE------------------------------- 434
R VF+ M ++ V+W+++I Y +G G+
Sbjct: 363 RKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNG 422
Query: 435 ---KALEMFMEME-KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI--YKIEPKV 488
A+++F EM G P+ TFI VL AC G + E L +I ++E V
Sbjct: 423 CAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE---VKALHAQISESELESNV 479
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
++++ R G + ++E L + E W A+++A S + + Q M+
Sbjct: 480 VVTNTLINMYARCGSLEEAERLFAA-AKEKTVVSWTAMVAAFSQYGRYAEALDLFQE-MD 537
Query: 549 LEPRDPGPYVLLSNIY 564
LE P S ++
Sbjct: 538 LEGVKPDDVTYTSILF 553
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 226/464 (48%), Gaps = 24/464 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
++ TF + C+ + EG+ +H RI FE D V N+LI MY C ++DAR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 216 E--DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGD 269
E D ++V+WN+MI Y +N A L+ M + D T+ S++ +
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ 125
Query: 270 -MEAANGLF--DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALY 326
E N +F L F+ + N ++ YA+ G+V A+ F + R+ SWN ++ +
Sbjct: 126 GREIHNRVFYSGLDSFQSLA--NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ D+ LR+F M + D KPN + ++V++ + V+ G+ IH+ I D+
Sbjct: 184 SQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDL 242
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
+++T+L+ MY KCG AR VFD M ++++VSWN MI Y +G +ALE++ +++
Sbjct: 243 VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDME 302
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWW-YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G ATF+ +L AC+ + +G + +++R ++ +V +V++ + G +
Sbjct: 303 GFKRTKATFVSILGACSSVKALAQGRLVHSHILER--GLDSEVAVATALVNMYAKCGSLE 360
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ ++ + + A W L+ A +++ + + + L RD + + Y
Sbjct: 361 EARKVFNAMKNRDAVA-WSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTY- 418
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCP 609
V+N + K + G++ + P +++E C
Sbjct: 419 -------VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACA 455
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
D +P+ + ++VL +C++ G + G+ +H I+ R + D ++ +L++MY KC + A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 406 RNVFDNM--TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
R+VF++M ++NVVSWN+MI Y +G +AL ++ M +G + TF+ VL AC+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 279/523 (53%), Gaps = 61/523 (11%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF-PLLGKVC 167
+V FFD + + D N ++ F+ D A SF+ AK N ++ LL C
Sbjct: 193 AVQFFDEMVK-DMTSWNLMLAGFVRTGDLNAASSFF-----AKIESPNVISWVTLLNGYC 246
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVR---------NSLIHMYSVCGEVLDARKVFEDG 218
R G+ AR DLF R N ++ Y + +A K+F++
Sbjct: 247 ------RAGRIADAR--------DLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEM 292
Query: 219 PVWDLVTWNSMIDG-------------------------------YVKNREVGFARELFD 247
P+ + ++W ++I G Y++ AR +FD
Sbjct: 293 PIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFD 352
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
M D WN+MISGYV G +E A LF MP +D+VSWN MI GYA+ G + A
Sbjct: 353 GMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGI 412
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F RM RN VSWN +++ +V+ + + L F M RG + + ++ S L ACAN+ V+
Sbjct: 413 FRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVL 472
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+G+ +H+ + + D +L++ YAKCG + A+ +FD M K++VSWN++I GY
Sbjct: 473 HVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGY 532
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+GQG +A+ +F EME G P++ TF+ +LSAC+HAG++ EG ++F M + Y ++P
Sbjct: 533 ASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPV 592
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
EHY CMVDLLGRAG + ++ ELV + ++ +WGALL AC H N EL ++ A+ L
Sbjct: 593 AEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLS 652
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
ELEPR YVLLSNI A GKWDE E R +KEK + K G
Sbjct: 653 ELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPPG 695
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 66/327 (20%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I Y+ G DA K+ + P DLV+WNS + G ++ E+ A + FD M +D+
Sbjct: 147 NAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMV-KDMT 205
Query: 256 TWNSMISGYVDVGDMEAA-------------------NG------------LFDLMPFRD 284
+WN M++G+V GD+ AA NG LFD MP R+
Sbjct: 206 SWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERN 265
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
VV+WN M+DGY + + A FD M ++N +SW +++ R E L D+M
Sbjct: 266 VVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKM-- 323
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP-----------DVLLSTSLL 393
S V A M H Y+Q+ D + +++
Sbjct: 324 --------SFNCVAAKTALM---------HGYLQRNMADDARRIFDGMEVHDTVCWNTMI 366
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
+ Y +CG+++ A +F M K++VSWN+MI GY GQ KA+ +F M +R N
Sbjct: 367 SGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRR----NTV 422
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQR 480
++ V+S ++ +F LM+R
Sbjct: 423 SWNSVISGFVQNDRFVDALHHFMLMRR 449
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 147/311 (47%), Gaps = 45/311 (14%)
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
F N + + G++ AR++F+ P+ + VT+N+M+ ++ + AR LFD MP R
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR 78
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM- 311
+ +WN+MI+ D G + A LFD MP RD SW M+ YA+ G++ AR+ DRM
Sbjct: 79 NTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMP 138
Query: 312 -----------------------CMR--------NVVSWNILLALYVRCKDYCECLRLFD 340
M+ ++VSWN LA + + ++ FD
Sbjct: 139 GDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFD 198
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M++ + S +L G ++ + I+ P+V+ +LL Y + G
Sbjct: 199 EMVK-----DMTSWNLMLAGFVRTGDLNAASSFFAKIE----SPNVISWVTLLNGYCRAG 249
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ AR++FD M E+NVV+WN M+ GY E+A ++F EM P N ++ ++S
Sbjct: 250 RIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEM----PIKNSISWTTIIS 305
Query: 461 ACTHAGMVLEG 471
AG + E
Sbjct: 306 GLARAGKLQEA 316
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 186/595 (31%), Positives = 319/595 (53%), Gaps = 24/595 (4%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSL 103
DN LP V + +C +K IH + GL D F + L +
Sbjct: 29 DNYTLPFV---------IRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA-ALVDMYVKC 78
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLL 163
+ + FD +QE D ++ + +L + EKM + V + +
Sbjct: 79 REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF-EKMREEGVVPDKVAMVTV 137
Query: 164 GKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
CA + ++ + + + I + F+LD+ + ++I MY+ CG V AR++F+ ++
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 197
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDL 279
++W++MI Y + + A +LF M D T S++ D+ +++ L
Sbjct: 198 ISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGR-LIHH 256
Query: 280 MPFR---DVVSWNC--MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+ ++ D+ + C ++D Y K + AR FD+M R++V+W +++ Y C + E
Sbjct: 257 IVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANE 316
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L LFD+M P++ ++++V+ ACA +G + + I YIQ+ + + DV+L T+++
Sbjct: 317 SLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMID 376
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
M+AKCG ++ AR +FD M EKNV+SW++MI YG HGQG KAL++F M + G PN T
Sbjct: 377 MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 436
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+ +L AC+HAG+V EG +F LM Y + V+HY C+VDLLGRAG + ++ +L+ +
Sbjct: 437 LVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 496
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
+E LWGA L AC TH + L + A L+EL+P++PG Y+LLSNIYA+ G+W++V
Sbjct: 497 TVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVA 556
Query: 575 NLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
R +M ++ L+K G + + + + V + R +Y ML +G ++++
Sbjct: 557 KTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLEL 611
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ + DY C F +IR A+P+ +L V+ AC ++ + +G+ IH + K + D
Sbjct: 5 FAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 64
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+ +L+ MY KC ++ AR +FD M E+++V+W MI GY G+ ++L +F +M +
Sbjct: 65 HFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 124
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G P+ + V+ AC G + + D +QR K + V M+D+ + G +
Sbjct: 125 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR-KKFQLDVILGTAMIDMYAKCGCVE 183
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNS 536
+ E+ ++ E W A+++A H
Sbjct: 184 SAREIFDRME-EKNVISWSAMIAAYGYHGQG 213
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 298/560 (53%), Gaps = 10/560 (1%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH L+ G D F+A+ L + + ++ ++ F+ I++PD N ++ ++
Sbjct: 280 IHGYLIKLGYDWDPFSAN-ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
AL +M + N +T K CAG+ G+++H+ ++K E DLFV
Sbjct: 339 HHEQALELL-GQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVS 397
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI- 254
L+ MYS C + DAR F P DL+ WN++I GY + E A LF M + I
Sbjct: 398 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 457
Query: 255 FTWNSM------ISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNC 307
F ++ +G V +GL F D+ N +ID Y K +V A
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+ + ++VS+ ++ Y + E L+LF M + KP+ S+L ACAN+
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+ G+ +H +I K D+ SL+ MYAKCG +D A F +TE+ +VSW++MI G
Sbjct: 578 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 637
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG G +AL++F +M K G +PN T + VL AC HAG+V E YF+ M+ ++ +P
Sbjct: 638 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 697
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
EHY CM+DLLGRAG + ++ ELV+K+P EA ++WGALL A H + ELG+ A+ L
Sbjct: 698 QEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLF 757
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
LEP G +VLL+NIYAS GKW+ V +RR+M++ +++K G S + + +V +
Sbjct: 758 ILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGD 817
Query: 608 CPPHRKCIVYSMLGEIGAQM 627
+R +Y+ L E+ M
Sbjct: 818 RSHYRSQEIYAKLDELSDLM 837
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 246/467 (52%), Gaps = 26/467 (5%)
Query: 16 SLDKFIKSQKNLPKTP-PKLWANEPKPKFTDTDNQRLPIVDL---------SHPILQKLE 65
S K + + +LP P PKL + P+F+ D Q I++L S + L
Sbjct: 8 SFQKPLHQRLHLPFKPAPKLI--QTVPQFSQ-DPQTTAILNLIDKGNFTPTSVSYSKLLS 64
Query: 66 SCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
C T K QIH + SGLS D + ++ L + + + D EPD
Sbjct: 65 QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLIN-LYSKCRNFGYARKLVDESSEPDLV 123
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ ++ + GAL ++E M V+ N +TF + K C+ ++ LR GK+VH
Sbjct: 124 SWSALISGYAQNGLGGGALMAFHE-MHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGV 182
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+V GFE D+FV N+L+ MY+ C E LD++++F++ P ++V+WN++ YV+ G A
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEA 242
Query: 243 RELFDFMPERDI----FTWNSMI---SGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDG 294
LF M I F+ +SM+ +G D + +G + + D S N ++D
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDM 302
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YAK+G++ A + F+++ ++VSWN ++A V + + + L L +M R PN +L
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTL 362
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
S L ACA MG+ ++G+ +HS + K ++ D+ +S L+ MY+KC +++ AR F+ + E
Sbjct: 363 SSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE 422
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
K++++WN++I GY + + +AL +F+EM K G N T +L +
Sbjct: 423 KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS 469
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 193/376 (51%), Gaps = 12/376 (3%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C +SLR G ++HA I K G D +RN LI++YS C ARK+ ++ DLV+W
Sbjct: 66 CCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSW 125
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDM---EAANGLFDL 279
+++I GY +N G A F M + FT++S++ V D+ + +G+ +
Sbjct: 126 SALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVV 185
Query: 280 MPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC-ECLR 337
F DV N ++ YAK ++ FD + RNVVSWN L + YV+ D+C E +
Sbjct: 186 SGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQI-DFCGEAVG 244
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LF M+ KPNE SL S++ AC + G+ IH Y+ K D + +L+ MYA
Sbjct: 245 LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
K G + A +VF+ + + ++VSWN++I G +H E+ALE+ +M++ G PN T
Sbjct: 305 KVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSS 364
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
L AC G+ G + ++ +E + +VD+ + L+ D+ + LP E
Sbjct: 365 ALKACAGMGLKELGRQLHSSLMKM-DMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-E 422
Query: 518 AGPALWGALLSACSTH 533
W A++S S +
Sbjct: 423 KDLIAWNAIISGYSQY 438
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+G+ P S +L+ C + G IH++I K + D + L+ +Y+KC
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFG 108
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR + D +E ++VSW+++I GY +G G AL F EM G N+ TF VL AC+
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Query: 464 -----------HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
H +V+ G+ E V +V + + DS+ L
Sbjct: 169 IVKDLRIGKQVHGVVVVSGF------------EGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 513 KLPMEAGPALWGALLS 528
++P E W AL S
Sbjct: 217 EIP-ERNVVSWNALFS 231
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 308/542 (56%), Gaps = 14/542 (2%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L++CS + F ++H Q++ G + DSF + L + + S FD + +
Sbjct: 110 LKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTG-LVDMYAKCGEIECSRSVFDENLDRN 167
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F ++++ ++ N L + +M + +E N T +L C + +L +GK +H
Sbjct: 168 VFSWSSMIAGYVQNNLAQDGLVLF-NRMREELIEANQITLGILVHACKKLGALHQGKWLH 226
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR--- 237
++KCG EL ++ +L+ +Y+ CG V DAR VF++ D+V+W +MI GY +N
Sbjct: 227 GYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPE 286
Query: 238 ---EVGFARELFDFMP-ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
++ +E +P + I + S S +++ + +GL + RD + N ++D
Sbjct: 287 EALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTNSLVD 346
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
YAK AR F+ + R+VV+WN +++ + + E L LF +M G P+ +
Sbjct: 347 FYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVT 406
Query: 354 LMSVLTACANMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
L+SVL+ACA++ + +G H+Y +++ + +V + T+LLT YAKCG + AR +FD M
Sbjct: 407 LVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGM 466
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+K+ V+W++MI GYG+ G G +L +F +M K PN+ F +LSAC+H GM+ EGW
Sbjct: 467 DQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGW 526
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F ++ + Y + P +HY CMVDLL RAG ++++ + + K+P++ +L+GA L C
Sbjct: 527 RLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGL 586
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
HS +LG++ + ++EL P D YVL+ N+YAS+ +W +V+ +R +MK++ L K G S
Sbjct: 587 HSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCS 646
Query: 593 LV 594
L+
Sbjct: 647 LM 648
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 218/421 (51%), Gaps = 14/421 (3%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
+P+ + H L C + ++H L+V GL++D + S L L S + L+
Sbjct: 1 MPLPPILHNFFYSL--CDNINTLMEMHAYLVVQGLTRD-LSCSTKLVSLYGSFGRLDLAR 57
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
L FD I PD F+ ++ + LN F + +Y +M E ++ F + K C+
Sbjct: 58 LVFDTIPHPD-FLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSES 116
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
R+ EG+KVH +IVK G D FV L+ MY+ CGE+ +R VF++ ++ +W+SMI
Sbjct: 117 RNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMI 175
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL--FDLMPFRD 284
GYV+N LF+ M E I T ++ +G + L + + +
Sbjct: 176 AGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIE 235
Query: 285 VVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+ S+ ++D YAK G V AR+ FD + ++VSW ++ Y + E L+LF +
Sbjct: 236 LGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQK 295
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ PN+ ++ SV ++C+ + +++G+ IH K + D +++ SL+ YAKC +
Sbjct: 296 EQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSR-DPIVTNSLVDFYAKCQMN 354
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
AR VF+ +++++VV+WNS+I + +G +ALE+F +M P+ T + VLSAC
Sbjct: 355 RDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSAC 414
Query: 463 T 463
Sbjct: 415 A 415
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H+Y+ + D+ ST L+++Y G +DLAR VFD + + +SW +I Y ++ +
Sbjct: 24 MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ + M ++ F VL AC+ + EG
Sbjct: 84 FRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEG 122
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 256/422 (60%), Gaps = 8/422 (1%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H +K GFE LFV N+LIHMY++CG++ A+K+F+ DLV+WN++I GY + +
Sbjct: 46 IHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNK 105
Query: 239 VGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNC 290
LFD M + D T +I +GD E A+ + + DV N
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNT 165
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+ID Y ++GN+T+AR FD M R+V+SW ++ Y + + + ++LF M+ KP+
Sbjct: 166 LIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPD 225
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ ++ SVL+ACA++G +D+G +H YI++ ++ D+ + SL+ MY KCG+++ A VF
Sbjct: 226 KVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFH 285
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M +K+ VSW S+I G ++G AL++F +M + G P TF+ +L AC HAG+V +
Sbjct: 286 RMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNK 345
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G YF+ M+ ++ + P ++HYGC+VDLL R+G + + E + K+P+ +W LLSAC
Sbjct: 346 GLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSAC 405
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N L +I + L+EL+P D G YVLLSN YA +WD+ +R +M++ +++K G
Sbjct: 406 KLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSG 465
Query: 591 SS 592
SS
Sbjct: 466 SS 467
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 177/406 (43%), Gaps = 21/406 (5%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
IH L G F S L + + + FDG+ + D NT++ +
Sbjct: 45 SIHVHALKLGFESYLFV-SNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQY 103
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N L + + M A ++ + T + C+ + + I + E+D+++
Sbjct: 104 NKYKEVLRLF-DAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYL 162
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----P 250
N+LI MY G + ARK+F++ P D+++W SMI GY + + A +LF M
Sbjct: 163 GNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKV 222
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARN 306
+ D T S++S +G ++ + + D+ N +ID Y K G V A
Sbjct: 223 KPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALE 282
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
F RM ++ VSW +++ L LF +M+R +P + + +L ACA+ G+
Sbjct: 283 VFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGL 342
Query: 367 IDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMI 424
++ G ++ S + P + ++ + ++ G +D A M +VV W ++
Sbjct: 343 VNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILL 402
Query: 425 MGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+HG E A + +E++ P D+ +LS T+AG+
Sbjct: 403 SACKLHGNVVLAEIATKRLLELD-----PCDSGNYVLLSN-TYAGV 442
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
A+L+ LT N+ I IH + K + + +S +L+ MYA CG + A+ +FD
Sbjct: 27 AALVVALTT--NINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDG 84
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M ++++VSWN++I GY + + ++ L +F M + T + ++ AC+H G
Sbjct: 85 MLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLG----D 140
Query: 472 WWYFDLMQRIYK---IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
W + D M + K +E V ++D+ GR G + + +L +P
Sbjct: 141 WEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMP 187
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 203/628 (32%), Positives = 318/628 (50%), Gaps = 86/628 (13%)
Query: 49 QRLPIVD-LSHPILQKLESCS-TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV 106
Q L ++D + H I L S + ++ + Q H +L +GL D+ A+++L ++
Sbjct: 6 QALALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFA 65
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+ L D + EP+ F +T++ +F + ALS + +M+ + + ++ P K
Sbjct: 66 D-ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALS-TFSQMLTRGLMPDNRVLPSAVKA 123
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-----DGPVW 221
CAG+ +L+ ++VH GF+ D FV++SL+HMY C ++ DA +VF+ D W
Sbjct: 124 CAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSW 183
Query: 222 ------------------------------DLVTWNSMIDGYVKNREVGFARELFDFMP- 250
+L++WN MI G+ N ++ + F+
Sbjct: 184 SALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGF--NHSGLYSEAVLMFLDM 241
Query: 251 -----ERDIFTWNS---------------MISGYVD----VGDMEAANGL---------- 276
E D T +S +I GYV V D ++ L
Sbjct: 242 HLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCT 301
Query: 277 ------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF----DRMCMRNVVSWNILLALY 326
FD M DV S N I G ++ G V S+ F D+ NVVSW ++A
Sbjct: 302 SEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACC 361
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ E L LF M KPN ++ +L AC N+ + G+ H + + I DV
Sbjct: 362 SQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDV 421
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
+ ++L+ MYAKCG + +R FD + KN+V WN++I GY MHG+ ++A+E+F M++
Sbjct: 422 YVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRS 481
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G P+ +F CVLSAC+ +G+ EG +YF+ M Y IE +VEHY CMV LL RAG +
Sbjct: 482 GQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQ 541
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ ++ ++P+ +WGALLS+C H+N LG++ A+ L ELEP +PG Y+LLSNIYAS
Sbjct: 542 AYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYAS 601
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLV 594
+G W+EV +R +MK K L K G S +
Sbjct: 602 KGMWNEVNRVRDMMKNKGLRKNPGCSWI 629
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 295/535 (55%), Gaps = 27/535 (5%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H +V G++ + F S ++ L + L+ FD + E D + NT++ F
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVD-LYFKFTRAELARKVFDVMPERDTVLWNTMISGF---- 189
Query: 136 DPFGALSFYYEKMMAKFVE-------HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
+ + Y+E + FV+ + T + A ++ R G + K G
Sbjct: 190 ----SRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL 245
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFARE 244
D++V LI +YS CG+ R +F+ DL+++N+MI GY N E V RE
Sbjct: 246 HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRE 305
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL-----MPFRDVVSWNCMIDGYAKIG 299
L + T +I Y+ ++ + + +L + + VS + Y ++
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS-TALTTVYCRLN 364
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V AR FD +++ SWN +++ Y + + LF M+ PN ++ S+L+
Sbjct: 365 EVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILS 423
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G + IG+W+H I+ R++ +V +ST+L+ MYAKCG + AR +FD M +KNVV+
Sbjct: 424 ACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI GYG+HG G++AL++F EM + G P TF+ +L AC+H+G+V EG F M
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y +P EHY CMVD+LGRAG + ++ E + ++P+E GPA+WGALL AC H N+E+
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ ++ L +L+P + G YVLLSNIY+++ + + ++R+++K+++L K G +L+
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 237/514 (46%), Gaps = 15/514 (2%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L L + +T+ + QI QL++ G+ D + +++ K L +V+ F+ + +PD
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFF-DLGAVAHVRQLFNKVSKPD 76
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F+ N +++ F P ++ Y + +++T+ + + R G +H
Sbjct: 77 LFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLH 136
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR--- 237
A + G +LFV ++++ +Y ARKVF+ P D V WN+MI G+ +N
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196
Query: 238 -EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
+ ++ D D T ++++ ++ + G+ L + DV +I
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
Y+K G R FD++ +++S+N +++ Y + + LF ++ + N +
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+ ++ + + + I + K I +ST+L T+Y + + AR +FD
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDES 376
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
EK++ SWN+MI GY +G ++A+ +F EM + +PN T +LSAC G + G
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGK 435
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
W L++ ++E V +VD+ + G + ++ +L L ++ W A+++
Sbjct: 436 WVHGLIKS-ERLESNVYVSTALVDMYAKCGSIVEARQLFD-LMVDKNVVTWNAMITGYGL 493
Query: 533 HSNS-ELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
H + E K+ + L P P LS +YA
Sbjct: 494 HGHGKEALKLFYEMLQSGIP--PTGVTFLSILYA 525
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 295/535 (55%), Gaps = 27/535 (5%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H +V G++ + F S ++ L + L+ FD + E D + NT++ F
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVD-LYFKFTRAELARKVFDVMPERDTVLWNTMISGF---- 189
Query: 136 DPFGALSFYYEKMMAKFVE-------HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
+ + Y+E + FV+ + T + A ++ R G + K G
Sbjct: 190 ----SRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL 245
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFARE 244
D++V LI +YS CG+ R +F+ DL+++N+MI GY N E V RE
Sbjct: 246 HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRE 305
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL-----MPFRDVVSWNCMIDGYAKIG 299
L + T +I Y+ ++ + + +L + + VS + Y ++
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS-TALTTVYCRLN 364
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V AR FD +++ SWN +++ Y + + LF M+ PN ++ S+L+
Sbjct: 365 EVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILS 423
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G + IG+W+H I+ R++ +V +ST+L+ MYAKCG + AR +FD M +KNVV+
Sbjct: 424 ACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI GYG+HG G++AL++F EM + G P TF+ +L AC+H+G+V EG F M
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y +P EHY CMVD+LGRAG + ++ E + ++P+E GPA+WGALL AC H N+E+
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ ++ L +L+P + G YVLLSNIY+++ + + ++R+++K+++L K G +L+
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 237/514 (46%), Gaps = 15/514 (2%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L L + +T+ + QI QL++ G+ D + +++ K L +V+ F+ + +PD
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFF-DLGAVAHVRQLFNKVSKPD 76
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F+ N +++ F P ++ Y + +++T+ + + R G +H
Sbjct: 77 LFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLH 136
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR--- 237
A + G +LFV ++++ +Y ARKVF+ P D V WN+MI G+ +N
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196
Query: 238 -EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
+ ++ D D T ++++ ++ + G+ L + DV +I
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
Y+K G R FD++ +++S+N +++ Y + + LF ++ + N +
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+ ++ + + + I + K I +ST+L T+Y + + AR +FD
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDES 376
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
EK++ SWN+MI GY +G ++A+ +F EM + +PN T +LSAC G + G
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGK 435
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
W L++ ++E V +VD+ + G + ++ +L L ++ W A+++
Sbjct: 436 WVHGLIKS-ERLESNVYVSTALVDMYAKCGSIVEARQLFD-LMVDKNVVTWNAMITGYGL 493
Query: 533 HSNS-ELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
H + E K+ + L P P LS +YA
Sbjct: 494 HGHGKEALKLFYEMLQSGIP--PTGVTFLSILYA 525
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 288/519 (55%), Gaps = 60/519 (11%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG--EVLDARKVFEDGPVWDLVTWNS 228
+S+RE K+VHA +VK G D + ++ + + ++ A VF+ P + WN+
Sbjct: 26 KSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNT 85
Query: 229 MIDGYVKNRE------VGFARELFDFMPERDIFTWNSMISG------------------- 263
+I + ++ + F + L + E + FT+ S++
Sbjct: 86 VIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLK 145
Query: 264 ----------------YVDVGDMEAANGLF--------DLMPF-RD-------VVSWNCM 291
YV G ME AN LF D+ RD VV N M
Sbjct: 146 FGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVM 205
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPN 350
+DGYA++GN+ +AR FDRM R+VVSWN++++ Y + Y E + +F RM++ GD PN
Sbjct: 206 VDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPN 265
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+L+SVL A + +GV+++G+W+H Y +K +I+ D +L ++L+ MYAKCG ++ A VF+
Sbjct: 266 RVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFE 325
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+ + NV++WN++I G MHG+ MEK G +P+D T+I +LSAC+HAG+V E
Sbjct: 326 RLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDE 385
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G +F+ M ++PK+EHYGCMVDLLGRAG + ++EEL+ +PM+ +W ALL A
Sbjct: 386 GRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGAS 445
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N ++G A+ LM++ P D G YV LSN+YAS G WD V +R +MK+ ++ K G
Sbjct: 446 KMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPG 505
Query: 591 SSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
S + E +VE+ R ++SML EI ++ +
Sbjct: 506 CSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSL 544
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 221/464 (47%), Gaps = 74/464 (15%)
Query: 63 KLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQEPDA 121
++++C +++E Q+H L+ +G + D+ A+ +L+ TS + ++ FD + E +
Sbjct: 21 QIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNC 80
Query: 122 FMCNTIMKSFLMLND-PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F NT++++ D AL + + + VE N +TFP + K CA + L EGK+VH
Sbjct: 81 FAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVH 140
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF----------------EDGPVWDLV 224
++K G D FV +L+ MY +CG + DA +F E G +++V
Sbjct: 141 GLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVV 200
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF------- 277
N M+DGY + + ARELFD M +R + +WN MISGY G + A +F
Sbjct: 201 LCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMG 260
Query: 278 DLMPFR---------------------------------DVVSWNCMIDGYAKIGNVTSA 304
D++P R D V + ++D YAK G++ A
Sbjct: 261 DVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKA 320
Query: 305 RNCFDRMCMRNVVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
F+R+ NV++WN + LA++ + D RM + P++ + +++L+AC
Sbjct: 321 IQVFERLPQNNVITWNAVIGGLAMHGKAND---IFNYLSRMEKCGISPSDVTYIAILSAC 377
Query: 362 ANMGVIDIGQ-WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVS 419
++ G++D G+ + + + +KP + ++ + + G ++ A + NM K + V
Sbjct: 378 SHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVI 437
Query: 420 WNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
W +++ MH G +A E+ M+M P+D+ LS
Sbjct: 438 WKALLGASKMHKNIKIGMRAAEVLMQM-----APHDSGAYVALS 476
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 348 KPNEASLMSVL-----TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+PN AS L AC +M + + +H+++ K D ++T +L + A
Sbjct: 7 QPNTASYYPRLDVPQIKACKSMREL---KQVHAFLVKTGQTHDNAIATEILRLSATSDFR 63
Query: 403 DL--ARNVFDNMTEKNVVSWNSMIMGYG-MHGQGEKALEMFMEMEKRGPT-PNDATFICV 458
D+ A +VFD + E+N +WN++I + AL +F +M PN TF V
Sbjct: 64 DIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSV 123
Query: 459 LSACTHAGMVLEG 471
L AC + EG
Sbjct: 124 LKACAVMARLAEG 136
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 266/477 (55%), Gaps = 46/477 (9%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+ L +VC+ R+L EGKKVH I GF + + N L+ MY+ CG ++DARKVF++
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 219 PVWDLVTWNSMIDGYVKNREVGF---ARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
P DL +WN M++GY EVG AR+LFD M E+D ++W +M++GYV E A
Sbjct: 147 PNRDLCSWNVMVNGYA---EVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALV 203
Query: 276 LFDLMPF----------------------------------------RDVVSWNCMIDGY 295
L+ LM D V W+ ++D Y
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
K G + ARN FD++ ++VVSW ++ Y + + E LF ++ +PNE +
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA 323
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
VL ACA++ ++G+ +H Y+ + P S+SL+ MY KCG ++ A++V D +
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP 383
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
++VSW S+I G +GQ ++AL+ F + K G P+ TF+ VLSACTHAG+V +G +F
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ +++ +HY C+VDLL R+G + ++S++PM+ LW ++L CST+ N
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+L + AQ L ++EP +P YV ++NIYA+ GKW+E +R+ M+E + K GSS
Sbjct: 504 IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 176/368 (47%), Gaps = 17/368 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D++ ++ ++ + P AL Y N +T + A ++
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+R GK++H IV+ G + D + +SL+ MY CG + +AR +F+ D+V+W SMID
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 232 GYVKN---REVGFA--RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------ 280
Y K+ RE GF+ EL + +T+ +++ D+ E + M
Sbjct: 293 RYFKSSRWRE-GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P+ S ++D Y K GN+ SA++ D ++VSW L+ + E L+ FD
Sbjct: 352 PYSFASS--SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+++ KP+ + ++VL+AC + G+++ G ++ +S +K R+ T L+ + A+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 400 GVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G + ++V M K + W S++ G +G + A E E+ K P N T++ +
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENPVTYVTM 528
Query: 459 LSACTHAG 466
+ AG
Sbjct: 529 ANIYAAAG 536
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP ++ +++ C+ ++ G+ +H +I+ P +++ LL MYAKCG + AR
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VFD M +++ SWN M+ GY G E+A ++F EM ++ + ++ +++
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQ 197
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL---VSKLPMEAGPALWG 524
E + LMQR+ P + V +R +E+ + + +++ LW
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 525 ALLS-----ACSTHSNSELGKIVAQHLM 547
+L+ C + + KIV + ++
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVV 285
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 298/601 (49%), Gaps = 78/601 (12%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH------- 155
FD I P+ F N ++ + L P A + + Y ++A +H
Sbjct: 818 FDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADAL 877
Query: 156 -------------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMY 202
N Y+F CA + R G +VHA + K D+++ ++L+ MY
Sbjct: 878 LFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMY 937
Query: 203 SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPER---- 252
+ C +AR+VFE P ++V+WNS+I Y +N VG A LF F+P+
Sbjct: 938 AKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLA 997
Query: 253 ------------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
D+ N+++ Y G AA +FD M
Sbjct: 998 SVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMAS 1057
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
R VVS +I GYA+ NV A+ F +M +NV++WN+L+A Y + + E LRLF R+
Sbjct: 1058 RSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRL 1117
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMY 396
R P + +VL AC N+ + +GQ H ++ K + DV + SL+ MY
Sbjct: 1118 KRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 1177
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
K G +D VF+ M ++ VSWN+MI+G+ +G+ + AL +F M +P+ T I
Sbjct: 1178 LKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMI 1237
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSAC H+G+V EG YF M + I P +HY CM+DLLGRAG +++ EEL+ ++ M
Sbjct: 1238 GVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSM 1297
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
E LW +LL +C H N E+G+ A L EL+PR+ GPYVLLSN+YA GKW +V +
Sbjct: 1298 EPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRV 1357
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVAS 636
R MK + + K G S + G S + + K ++++L I QM+M R V S
Sbjct: 1358 RSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRII--QMQMSRVSVDS 1415
Query: 637 Q 637
+
Sbjct: 1416 E 1416
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 247/497 (49%), Gaps = 44/497 (8%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD I EP+A N I++ + + A+ ++ +M++ V YT C +
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMFF-RMLSAGVRPLGYTVSHAVLACRDNNA 267
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L EG+ +HA +++ G+E + VR+S++ MY+ CG + A+ +F P+ D+V S++ G
Sbjct: 268 LEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSG 327
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA------------------- 273
+ A+ +F+ M ER++ +WN+M++GY+ D+ A
Sbjct: 328 LASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITL 387
Query: 274 -------NGLFDLMPFRDVVSW-------------NCMIDGYAKIGNVTSARNC--FDRM 311
G+ D+ +V ++ N ++ Y+K G + SA F+
Sbjct: 388 GSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMG 447
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
R+ SWN L++ Y R L +M + + PN+++ S L ACAN+ ++ G
Sbjct: 448 SERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGM 506
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
IH+Y+ + + D +L + L+ MY KC D + +F+ ++V+ WNSMI G G
Sbjct: 507 QIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSG 566
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+GE L++F EM+K+G + TF+ L +C G V G YF LM I P++EHY
Sbjct: 567 KGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHY 625
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
CM++LLG+ G M + E+ V +P E A+W + C + N +LG+ A+ + + P
Sbjct: 626 ECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNP 685
Query: 552 RDPGPYVLLSNIYASEG 568
P +V + +++G
Sbjct: 686 LTPVQFVATVDYESNDG 702
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 205/447 (45%), Gaps = 59/447 (13%)
Query: 89 SFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKM 148
+F +R ++ L + SV+ + FD + D N I+ + P ALS + M
Sbjct: 85 TFLFNRAIESL-AACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLF-SNM 142
Query: 149 MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
+ + T + CA L +++H I K F+ ++ + +L+ +Y C +
Sbjct: 143 NSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLL 202
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGY------------------VKNREVGF--------- 241
DAR+ F+D + ++WN ++ Y R +G+
Sbjct: 203 ADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLAC 262
Query: 242 --------ARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
R + F+ E + +S++ Y G M+AA LF+L P +D+V
Sbjct: 263 RDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMST 322
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++ G A G + A+ F+ M RN+VSWN +L Y+R D L LF +M + +
Sbjct: 323 SIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREF 382
Query: 350 NEASLMSVLTACANMGVIDIGQW--IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+ +L SVL+AC G++DIG+ +H++ KC +L +L+ MY+KCG + A
Sbjct: 383 DAITLGSVLSACT--GILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAER 440
Query: 408 --VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT-- 463
+F+ +E++ SWNS+I GY H E AL +M+ TPN +TF L+AC
Sbjct: 441 LLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANI 499
Query: 464 ---------HAGMVLEGWWYFDLMQRI 481
HA M+ +G+ D+++ +
Sbjct: 500 FLLKQGMQIHAYMIRKGYEIDDILRSV 526
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 169/396 (42%), Gaps = 63/396 (15%)
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
F+ N I + CG V DAR++F+ P+ D +WN++I + A LF M
Sbjct: 86 FLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSL 145
Query: 253 DI----FTWNSMISGYVDVGDMEAANGLFDLMPFRD----VVSWNCMIDGYAKIGNVTSA 304
I T S++S + D+ A L + RD V+ ++D Y + A
Sbjct: 146 GIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADA 205
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
R FD + N +SWN+++ Y + +F RM+ +P ++ + AC +
Sbjct: 206 RRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDN 265
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL-------------------- 404
++ G+ IH+++ + + V + +S++ MYAKCG MD
Sbjct: 266 NALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIV 325
Query: 405 -----------ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
A+ VF+ M E+N+VSWN+M+ GY AL +F +M + +
Sbjct: 326 SGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAI 385
Query: 454 TFICVLSACT-----------HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
T VLSACT HA + G++ +++ +V + + G
Sbjct: 386 TLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILK------------NALVRMYSKCG 433
Query: 503 LMRDSEE-LVSKLPMEAGPALWGALLSACSTHSNSE 537
+R +E L+ ++ E W +L+S HS SE
Sbjct: 434 CLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSE 469
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 182/459 (39%), Positives = 270/459 (58%), Gaps = 24/459 (5%)
Query: 193 FVRNSLIHMYSVCGEVLDARKVF----EDGPVW-DLVTWNSMIDGYVKNREVGFAREL-- 245
F N+LI S + DA VF ED V + T+ S+ + + R++
Sbjct: 77 FSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHG 136
Query: 246 --FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF---------------RDVVSW 288
F + D F ++++ Y+ G ME A+ LF F DVV W
Sbjct: 137 LAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLW 196
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N MIDGY +IG + ARN FD M R+VVSWN+++A Y + + E + +F M +
Sbjct: 197 NVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVP 256
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN +L+SVL A + +G +++G+W+H Y + I D +L ++L+ MYAKCG ++ A V
Sbjct: 257 PNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQV 316
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ + ++NVV+W+++I G MHG+ + L+ F +ME+ G P+D T+I +LSAC+HAG+V
Sbjct: 317 FEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLV 376
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG W+FD M R+ +EP++EHYGCMVDLLGRAGL+ +SEEL+ +P++ +W ALL
Sbjct: 377 NEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLG 436
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N E+GK VA+HLMEL P D G YV LSNIYAS G W+ V +R +MKE ++ K
Sbjct: 437 ACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKD 496
Query: 589 VGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
G S + E +VE+ + ++SML E+ +
Sbjct: 497 PGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNL 535
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 220/457 (48%), Gaps = 71/457 (15%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLK-KLCTSLSSVSLSVLFFDGIQEPDAFMCN 125
C T+++ Q+H Q++ + +D AA+ +L+ + + + F + P+ F N
Sbjct: 21 CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYN 80
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
T++++ NDP AL + E + VE N +TFP + K C LREG++VH VK
Sbjct: 81 TLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVK 140
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDA-----RKVFEDG----------PVWDLVTWNSMI 230
G + D FV ++++ MY CG + DA R+VF DG D+V WN MI
Sbjct: 141 FGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMI 200
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV----- 285
DGYV+ E+ AR LFD MP+R + +WN MI+GY G + A +F M +V
Sbjct: 201 DGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYV 260
Query: 286 ----------------------------------VSWNCMIDGYAKIGNVTSARNCFDRM 311
V + +ID YAK G++ A F+ +
Sbjct: 261 TLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGL 320
Query: 312 CMRNVVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
RNVV+W+ + LA++ R KD L F+ M R P++ + + +L+AC++ G+++
Sbjct: 321 PKRNVVTWSTIIAGLAMHGRAKD---TLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVN 377
Query: 369 IGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMG 426
G+W ++ + ++P + ++ + + G+++ + + NM K + V W +++
Sbjct: 378 EGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGA 437
Query: 427 YGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
MHG G++ E ME+ P+D+ LS
Sbjct: 438 CKMHGNVEMGKRVAEHLMEL-----APHDSGSYVALS 469
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 297/546 (54%), Gaps = 11/546 (2%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
++ + Q H LL GL QD++ + +L+ ++ + + F P+ F+ NT++
Sbjct: 15 SLHQAKQCHCLLLRLGLHQDTYLINLLLRS-SLHFAATQYATVVFAQTPHPNIFLYNTLI 73
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI-RSLREGKKVHARIVKCG 187
+ ++ ND F Y M +++TFP + K C + G +H+ ++K G
Sbjct: 74 RG-MVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN----REVGFAR 243
F+ D+FV+ L+ +YS G + DARKVF++ P ++V+W ++I GY+++ +G R
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM----PFRDVVSWNCMIDGYAKIG 299
L + D FT ++ VGD+ + + M +V ++D YAK G
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
++ AR FD M ++VV W+ L+ Y E L +F M R + +P+ +++ V +
Sbjct: 253 SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFS 312
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
AC+ +G +++G W + + +L T+L+ YAKCG + A+ VF M K+ V
Sbjct: 313 ACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVV 372
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
+N++I G M G A +F +M K G P+ TF+ +L CTHAG+V +G YF M
Sbjct: 373 FNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMS 432
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
++ + P +EHYGCMVDL RAGL+ ++++L+ +PMEA +WGALL C H +++L
Sbjct: 433 SVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLA 492
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
+ V + L+ELEP + G YVLLSNIY++ +WDE E +R + +K ++K G S V
Sbjct: 493 EHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGV 552
Query: 600 ASESIV 605
E +V
Sbjct: 553 VHEFLV 558
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 317/635 (49%), Gaps = 77/635 (12%)
Query: 36 ANEPKPKFTDTDNQRLPIVDLSH-PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASR 94
A E FT +RL + IL S + + +IH +++ +GL+ D+ +
Sbjct: 110 AQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGN- 168
Query: 95 VLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFV 153
L + SV + FD + D T+ ++ +G S Y M+ + V
Sbjct: 169 ALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA--ESGYGEESLKTYHAMLQERV 226
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ T+ + C + +L +GK++HA IV+ + D+ V +L MY CG
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCG------- 279
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA 273
F+D ARE+F+ + RD+ WN+MI G+VD G +E A
Sbjct: 280 AFKD------------------------AREVFECLSYRDVIAWNTMIRGFVDSGQLEEA 315
Query: 274 NGLFDLM------PFR---------------------------------DVVSWNCMIDG 294
+G F M P R DV N +I+
Sbjct: 316 HGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINM 375
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y+K G++ AR FDRM R+VVSW LL Y C E F +M++ K N+ +
Sbjct: 376 YSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITY 435
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
M VL AC+N + G+ IH+ + K + D+ ++ +L++MY KCG ++ A VF+ M+
Sbjct: 436 MCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSM 495
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
++VV+WN++I G G +G+G +AL+ + M+ G PN ATF+ VLSAC +V EG
Sbjct: 496 RDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQ 555
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M + Y I P +HY CMVD+L RAG +R++E+++ +P++ A+WGALL+AC H
Sbjct: 556 FAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHC 615
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N E+G+ A+H ++LEP++ G YV LS IYA+ G W +V LR+ MKE+ ++K G S +
Sbjct: 616 NVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWI 675
Query: 595 H-PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
GE S + P R +Y+ L + QMK
Sbjct: 676 EIAGEVHSFVARDQSHP-RTQEIYAELETLKKQMK 709
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 199/380 (52%), Gaps = 33/380 (8%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ Y + L + C + L GK+VH I++CG + ++++ N+L+ +Y+ CG V +AR++F
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-------ERDIFTWNSMISG----- 263
+ +V+WN MI GY G A+E F+ E D FT+ S++S
Sbjct: 87 DKFSNKSVVSWNVMISGYAHR---GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPA 143
Query: 264 ------YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+ V MEA GL + D N +I YAK G+V AR FD M R+ V
Sbjct: 144 VLNWGREIHVRVMEA--GLAN-----DTTVGNALISMYAKCGSVRDARRVFDAMASRDEV 196
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SW L Y E L+ + M++ +P+ + M+VL+AC ++ ++ G+ IH++I
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI 256
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ DV +ST+L MY KCG AR VF+ ++ ++V++WN+MI G+ GQ E+A
Sbjct: 257 VESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAH 316
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK--IEPKVEHYGCMV 495
F M + G P+ AT+ VLSAC G + G ++ R K + V ++
Sbjct: 317 GTFHRMLEEGVAPDRATYTTVLSACARPGGLARG---KEIHARAAKDGLVSDVRFGNALI 373
Query: 496 DLLGRAGLMRDSEELVSKLP 515
++ +AG M+D+ ++ ++P
Sbjct: 374 NMYSKAGSMKDARQVFDRMP 393
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 294/535 (54%), Gaps = 10/535 (1%)
Query: 68 STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
+ +K +IH QL+ + + + FA + V+ + + + FD + E D NTI
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVN-MYAKCRQIDDAYKMFDRMPERDLVSWNTI 219
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ F AL +M + + T + A + L GK +H ++ G
Sbjct: 220 IAGFSQNGFAKKALELVL-RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG 278
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
F + + +L MYS CG V AR +F+ +V+WNSM+DGYV+N E A +F+
Sbjct: 279 FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFE 338
Query: 248 FMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMIDGYAKIG 299
M E I T + D+GD+E + + D+ N +I Y+K
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V A + F+ + R VSWN ++ Y + E L F M KP+ +++SV+
Sbjct: 399 RVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIP 458
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A A + V +WIH I + + ++ ++T+L+ MY+KCG + +AR +FD +++++V++
Sbjct: 459 ALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT 518
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI GYG HG G AL++F +M+K PND T++ V+SAC+H+G+V EG +F M+
Sbjct: 519 WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMK 578
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ Y +EP ++HYG MVDLLGRAG ++++ + + +P+ G ++GA+L AC H N E+G
Sbjct: 579 QDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVG 638
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ L EL P + G +VLL+NIYAS KW +V +R+ M++K L+K G S+V
Sbjct: 639 EKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVV 693
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 262/504 (51%), Gaps = 18/504 (3%)
Query: 41 PKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC 100
P T ++ +P HP LE C+++KE HQI ++ +GL + ++++ L
Sbjct: 33 PFHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVS-LF 91
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
+ S++ + F+ I + + +T++K + + AL+F +M V+ Y F
Sbjct: 92 SKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLC-RMRYDDVKPVVYNF 150
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
L KVC L+ GK++H +++ F ++F +++MY+ C ++ DA K+F+ P
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFM-------PERDIFTWNSMISGYVDVGDM--- 270
DLV+WN++I G+ +N GFA++ + + D T +++ DVG +
Sbjct: 211 RDLVSWNTIIAGFSQN---GFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 271 EAANGLFDLMPFRDVVSWN-CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
++ +G F +V+ + + D Y+K G+V +AR FD M + VVSWN ++ YV+
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
+ + + +F++M+ P ++M L ACA++G ++ G+++H ++ + + D+ +
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
SL++MY+KC +D+A ++F+N+ + VSWN+MI+GY +G+ +AL F EM+ G
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
P+ T + V+ A + W L+ R ++ + +VD+ + G + + +
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC-LDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 510 LVSKLPMEAGPALWGALLSACSTH 533
L + + W A++ TH
Sbjct: 507 LFDMIS-DRHVITWNAMIDGYGTH 529
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 308/562 (54%), Gaps = 24/562 (4%)
Query: 49 QRLPIVDLSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS 105
QR I D S ++ L+ C K+ Q+H ++ S + Q++ + +L +
Sbjct: 21 QRGLITD-SFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLH-VYIECGR 78
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
+ + FD + + N ++ ++ A+ + E M + V+ N T+ ++ K
Sbjct: 79 LQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFRE-MCHEGVQPNAGTYMIILK 137
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA + +L+ GK+VHA I G E D+ V +L+ MY CG + +AR++F++ D+++
Sbjct: 138 ACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIIS 197
Query: 226 WNSMIDGYVKNREVGFARELFDFM--PERDIFTWNSMISGYVDVGDMEAANGLF------ 277
W MI Y ++ G +E + M E++ F N++ YV + + A+ G
Sbjct: 198 WTVMIGAYAQS---GNGKEAYRLMLQMEQEGFKPNAIT--YVSILNACASEGALKWVKRV 252
Query: 278 -----DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
D DV ++ YAK G++ AR FDRM +R+VVSWN+++ +
Sbjct: 253 HRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRG 312
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
E LF +M KP+ +S+L ACA+ G ++ + IH + ++ DV + T+L
Sbjct: 313 HEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTAL 372
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ MY+K G +D AR VFD M +NVVSWN+MI G HG G+ ALE+F M G P+
Sbjct: 373 VHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDR 432
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF+ VLSAC+HAG+V EG + M ++Y IEP V H CMVDLLGRAG + +++ +
Sbjct: 433 VTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFID 492
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
+ ++ A WGALL +C T+ N ELG++VA+ ++L+P++ YVLLSNIYA GKWD
Sbjct: 493 NMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDM 552
Query: 573 VENLRRIMKEKELEKAVGSSLV 594
V +R +M+E+ + K G S +
Sbjct: 553 VSWVRTMMRERGIRKEPGRSWI 574
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 301/531 (56%), Gaps = 14/531 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH +L GL +D F + L + + V + L FD + E D +T+++S L
Sbjct: 115 EIHGFVLKKGLDRDVFVGN-ALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRS-LSR 172
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N F +M V + + + A ++R GK +HA +++ + V
Sbjct: 173 NKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGV 232
Query: 195 --RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
+L+ MY+ CG + AR++F +V+W +MI G +++ + +LF M E
Sbjct: 233 PTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEE 292
Query: 253 DIF----TWNSMI-----SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+IF T S+I +G + +G A L + ++ ++D Y K ++ +
Sbjct: 293 NIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALA-TALVDMYGKCSDIRN 351
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FD R+V+ W +L+ Y + + LFD+M +P + +++S+L+ CA
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
G +D+G+W+HSYI K R++ D +L+T+L+ MYAKCG ++ A +F +++ WN++
Sbjct: 412 AGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 471
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G+ MHG GE+AL++F EME++G PND TFI +L AC+HAG+V EG F+ M +
Sbjct: 472 ITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFG 531
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+ P++EHYGCMVDLLGRAGL+ ++ E++ +P++ +WGAL++AC H N +LG++ A
Sbjct: 532 LVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAA 591
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L+E+EP + G VL+SNIYA+ +W + +R+ MK ++K G S++
Sbjct: 592 TQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 642
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 265/477 (55%), Gaps = 46/477 (9%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+ L +VC+ R+L EGKKVH I GF + + N ++ MY+ CG ++DARKVF++
Sbjct: 89 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEM 148
Query: 219 PVWDLVTWNSMIDGYVKNREVGF---ARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
P D+ +WN M++GY EVG AR LFD MPERD ++W +M++GYV E A
Sbjct: 149 PERDVCSWNVMVNGYA---EVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALV 205
Query: 276 LFDLMPF----------------------------------------RDVVSWNCMIDGY 295
L+ LM D V W+ ++D Y
Sbjct: 206 LYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 265
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
K G + ARN FD++ ++VVSW ++ Y + + E LF +I +PNE +
Sbjct: 266 GKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFS 325
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
VL ACA++ ++G+ +H Y+ + P S+SL+ MY KCG ++ AR+V D +
Sbjct: 326 GVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKP 385
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
++VS S+I GY +G+ ++AL+ F + K G P+ TF+ VLSACTHAG+V +G +F
Sbjct: 386 DLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 445
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ + + +HY C+VDLL R+G + ++S++PM+ LW ++L CST+ N
Sbjct: 446 YSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGN 505
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+L + AQ L ++EP +P YV ++NIYA+ GKW+E +R+ M+E + K GSS
Sbjct: 506 IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSS 562
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 176/368 (47%), Gaps = 17/368 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D++ ++ ++ + P AL Y + N +T A I+
Sbjct: 175 LFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIK 234
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+R GK++H IV+ G + D + +SL+ MY CG + +AR +F+ D+V+W SMID
Sbjct: 235 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMID 294
Query: 232 GYVKN---REVGFA--RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------ 280
Y K+ RE GF+ EL + +T++ +++ D+ E + M
Sbjct: 295 RYFKSSRWRE-GFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFD 353
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P+ S +ID Y K GN+ SAR+ D ++VS L+ Y + E L+ FD
Sbjct: 354 PYSFASS--SLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFD 411
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+++ KP+ + ++VL+AC + G+++ G ++ +S +K + T L+ + A+
Sbjct: 412 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARS 471
Query: 400 GVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G + ++V M K + W S++ G +G + A E E+ K P N T++ +
Sbjct: 472 GRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENPVTYVTM 530
Query: 459 LSACTHAG 466
+ AG
Sbjct: 531 ANIYAAAG 538
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP ++ +++ C+ ++ G+ +H +I+ P +++ +L MYAKCG + AR
Sbjct: 84 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARK 143
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VFD M E++V SWN M+ GY G E+A +F EM P + ++ +++
Sbjct: 144 VFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEM----PERDSYSWTAMVTGYVKKDQ 199
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL---VSKLPMEAGPALWG 524
E + LMQR+ +P + V +R +E+ + + +++ LW
Sbjct: 200 PEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWS 259
Query: 525 ALL 527
+L+
Sbjct: 260 SLM 262
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 299/542 (55%), Gaps = 13/542 (2%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+++ + Q+H+ L +G+S D +L L V +++ F+ +
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD-LYVKCGDVETALVIFNSSDRTN 309
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N ++ +F +ND + + + M A + N +T+P + + C R + G+++H
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ VK GFE D++V LI MYS G + AR+V E D+V+W SMI GYV++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 241 FARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
A F M + I+ N S ISG + M + + DV WN ++
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+ YA+ G + A + F+ M +++ ++ N L++ + + + E L++F RM + K N
Sbjct: 489 NLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +S L+A AN+ I G+ IH+ + K + + +L+++Y KCG + A+ F M
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+E+N VSWN++I HG+G +AL++F +M+K G PND TFI VL+AC+H G+V EG
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M Y I P+ +HY C++D+ GRAG + +++ + ++P+ A +W LLSAC
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N E+G+ A+HL+ELEP D YVLLSN YA KW + +R++M+++ + K G S
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Query: 593 LV 594
+
Sbjct: 789 WI 790
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 199/428 (46%), Gaps = 38/428 (8%)
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR-EGKK------VH 180
+ FL DP LS + +K H L CA +R+ R G++ +H
Sbjct: 13 LAGFLAHEDPAKVLSLFADKA------RQHGGLGPLDFACA-LRACRGNGRRWQVVPEIH 65
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---- 236
A+ V G V N LI +YS G VL AR+VFE+ D V+W +M+ GY +N
Sbjct: 66 AKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE 125
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCM 291
+G R++ + +S++S ++ A L ++ ++ N +
Sbjct: 126 EALGLYRQMHRAGVVPTPYVLSSVLSSCTKA-ELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I Y + G+ A F M R+ V++N L++ + +C L +F+ M P+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
++ S+L ACA++G + G +HSY+ K I D ++ SLL +Y KCG ++ A +F++
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
NVV WN M++ +G K+ E+F +M+ G PN T+ C+L CT +
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI--- 361
Query: 472 WWYFDLMQRIYKIEPKV----EHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
DL ++I+ + K + Y G ++D+ + G + + ++ L E W +
Sbjct: 362 ----DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTS 416
Query: 526 LLSACSTH 533
+++ H
Sbjct: 417 MIAGYVQH 424
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 292/521 (56%), Gaps = 41/521 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+ + E D N ++ + ALS + M + V + T+ CA +
Sbjct: 250 LFESMPERDVVSWNMMVSALSQSGRAREALSVAVD-MHNRGVRLDSTTYTSSLTACAKLS 308
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SL GK++HA++++ +D +V ++++ +Y+ CG +AR+VF + V+W +I
Sbjct: 309 SLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIG 368
Query: 232 GYVKNREVGFARELFDFM---------------------------------------PER 252
G+++ + ELF+ M R
Sbjct: 369 GFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTR 428
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+ NS+IS Y G+++ A +F M RD+VSW M+ Y+++GN+ AR FD M
Sbjct: 429 AVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMS 488
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQ 371
RNV++WN +L Y++ + L+++ M+ D P+ + +++ CA+MG +G
Sbjct: 489 TRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGD 548
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
I + K + D + +++TMY+KCG + AR +FD ++ K++VSWN+MI GY HG
Sbjct: 549 QITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHG 608
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
G++A+E+F +M K+G P+ +++ VLS+C+H+G+V EG +YFD+++R + + P +EH+
Sbjct: 609 MGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHF 668
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
CMVDLL RAG + +++ L+ ++PM+ +WGALLSAC TH N+EL ++ A+HL +L+
Sbjct: 669 SCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDS 728
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
D G Y+LL+ IYA GK + +R++M++K ++K G S
Sbjct: 729 PDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYS 769
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 194/464 (41%), Gaps = 47/464 (10%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
V L + +L SC + + LL +++ + ++ L S+S + F
Sbjct: 63 VFLQNTLLHAYLSCGALPDARG----LLRGDITEPNVITHNIMMNGYAKLGSLSDAEELF 118
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+ D NT+M + A+ + + N +TF K C +
Sbjct: 119 GRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWH 178
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
++ + K GF+ D V ++ M+ CG V A K F + NSM+ GY
Sbjct: 179 EVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGY 238
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-EAANGLFDL------------- 279
K+ V A ELF+ MPERD+ +WN M+S G EA + D+
Sbjct: 239 AKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYT 298
Query: 280 -------------------------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+P D + M++ YAK G AR F + R
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR 358
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
N VSW +L+ +++ + E L LF++M ++ +L ++++ C+N + + + +H
Sbjct: 359 NTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLH 418
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S K V++S SL++MYAKCG + A ++F +M E+++VSW M+ Y G
Sbjct: 419 SLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIG 478
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
KA E F M R N T+ +L A G +G + M
Sbjct: 479 KAREFFDGMSTR----NVITWNAMLGAYIQHGAEEDGLKMYSAM 518
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 184/404 (45%), Gaps = 44/404 (10%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H Q++ S D + AS +++ L + F +++ + ++ FL
Sbjct: 315 QLHAQVIRSLPCIDPYVASAMVE-LYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQY 373
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+L + +M A+ + + + + C+ + +++H+ +K G + +
Sbjct: 374 GCFSESLELF-NQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVI 432
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
NSLI MY+ CG + +A +F D+V+W M+ Y + +G ARE FD M R++
Sbjct: 433 SNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV 492
Query: 255 FTWNSMISGYVDVGDMEAANGLF-------DLMP--------FR---------------- 283
TWN+M+ Y+ G E ++ D++P FR
Sbjct: 493 ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITG 552
Query: 284 ---------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
D N +I Y+K G ++ AR FD + +++VSWN ++ Y + +
Sbjct: 553 HTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQ 612
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLL 393
+ +FD M++ AKP+ S ++VL++C++ G++ G++ +++ + P + + ++
Sbjct: 613 AIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMV 672
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMGYGMHGQGEKA 436
+ A+ G + A+N+ D M K W +++ HG E A
Sbjct: 673 DLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA 716
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 182/436 (41%), Gaps = 90/436 (20%)
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DGPVWDLVTWNSMIDGYVKNRE 238
H R+V G +F++N+L+H Y CG + DAR + D +++T N M++GY K
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF-------DLMPFRDVVSWNC- 290
+ A ELF MP RD+ +WN+++SGY G A F D +P + ++ C
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLP--NAFTFGCA 168
Query: 291 ----------------------------------MIDGYAKIGNVTSARNCFDRMCMRNV 316
++D + + G V A F ++ V
Sbjct: 169 MKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTV 228
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGD------------------------------ 346
N +LA Y + L LF+ M D
Sbjct: 229 FCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNR 288
Query: 347 -AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+ + + S LTACA + + G+ +H+ + + D ++++++ +YAKCG A
Sbjct: 289 GVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEA 348
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
R VF ++ ++N VSW +I G+ +G ++LE+F +M T + ++S C++
Sbjct: 349 RRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR 408
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHY------GCMVDLLGRAGLMRDSEELVSKLPMEAG 519
+ L ++++ + K H ++ + + G ++++E + S + E
Sbjct: 409 MDMC-------LARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSME-ERD 460
Query: 520 PALWGALLSACSTHSN 535
W +L+A S N
Sbjct: 461 IVSWTGMLTAYSQVGN 476
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 303/562 (53%), Gaps = 49/562 (8%)
Query: 40 KPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVS-GLSQDSFAASRVLKK 98
KPKFT + +V + Q L+ +K ++H+++ + L + ++++
Sbjct: 26 KPKFTQQN-----VVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRA 80
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
S +F D I + + N +++S++ N + ++ M ++ +HY
Sbjct: 81 YAVCGEPWSTRHIF-DEIPKKNVVFFNVMIRSYVN-NHLYSDALLVFKNMAGHGIDPDHY 138
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+P + K +G L G ++HA +V+ G +L++FV N LI MY CG +++A +V
Sbjct: 139 TYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL--- 195
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA----- 273
D MP RD+ +WNS+++G G + A
Sbjct: 196 ----------------------------DQMPCRDVVSWNSLVAGCARNGQFDDALEVCK 227
Query: 274 -NGLFDLMPFRDVVSWNCMIDGYAK--IGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
L L P D + ++ + NV+ + F ++ +++VSWN+++A+Y+
Sbjct: 228 EMELLGLKP--DAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNS 285
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
E + +F +M P+ S+ SVL AC ++ + +G+ IH Y+ + R++P++LL
Sbjct: 286 MPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLEN 345
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
+L+ MYAKCG ++ AR VFD M ++VVSW SMI YGM+G+G A+ +F M+ G P
Sbjct: 346 ALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNP 405
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ F+ VLSAC+HAG++ EG +YF LM KI P++EH+ CMVDLLGRAG + ++
Sbjct: 406 DSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGF 465
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ ++PME +WGALLSAC +SN +G + A L +L P G YVLLSNIYA G+W
Sbjct: 466 IKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRW 525
Query: 571 DEVENLRRIMKEKELEKAVGSS 592
++V +R IMK K ++K G S
Sbjct: 526 EDVTTVRSIMKTKGIKKMPGVS 547
>gi|357119066|ref|XP_003561267.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 588
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 199/614 (32%), Positives = 318/614 (51%), Gaps = 81/614 (13%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS----LSVL 111
+ +L+ L S Q H Q+LV GL+ A R+L L ++ SVS + +
Sbjct: 1 MEQRLLEILRSLKFRHHLWQTHAQILVRGLA----ANPRLLPALVSAAFSVSSPSQAAAV 56
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLND--PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
NT+++ L P AL+ Y M A V N +TF L + C
Sbjct: 57 LRAASAAATTVAHNTLIERLTKLRGRGPEDALT-AYTAMRAVEVPPNGFTFTFLLRACEF 115
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTW 226
R L +++H +I+KCGF D+ V+N+L+ +Y C G V DAR+VF++ D+++W
Sbjct: 116 SRILPLCRRIHGQILKCGFGRDVVVQNALLDVYHKCSNPGYVGDARQVFDEMIEKDVISW 175
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
NS++ Y+ + +V A ELF+ MPER++ +WN++++ + VGDM +A +FD MP R+ +
Sbjct: 176 NSIVGVYMSSGDVKGAMELFEVMPERNVVSWNTVVASFARVGDMASAQAVFDRMPTRNAI 235
Query: 287 SWNCMIDGYA-------------------------------KIGNVTSARNCFDRMCMRN 315
SWN MI GYA KIGN+ A+ FD+M ++N
Sbjct: 236 SWNLMISGYAAGGDVEAARSIFYQTDQKDVVSWTAMISAYAKIGNLDLAKELFDQMPVKN 295
Query: 316 VVSWNILLALYVRCKDYCECLRLFD-RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+VSWN ++ Y Y E LR F M+ G +P+EA+L+SV++ACA +G + W+
Sbjct: 296 LVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSAEYCSWVS 355
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S+I+K V L +L+ M+AKCG + A+ +F M + V++W +MI G G +GQ
Sbjct: 356 SFIRKNNNDLTVALGNALIDMFAKCGDVGRAQLIFSGMKSRCVITWTTMISGLGFNGQCR 415
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+AL ++ +M + G +D FI VL+AC+H G + EGW F M ++ I+P++EHYGC+
Sbjct: 416 EALLVYNDMCREGVGLDDTVFIAVLAACSHGGFLHEGWSIFRQMVELHGIKPRMEHYGCI 475
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VDLLGRA EL + V++ ++E+EP
Sbjct: 476 VDLLGRA-----------------------------------ELIEYVSKKIVEIEPFSS 500
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
VL+SN A + +WD V + R IM++ +EK GSS + E + ++ H +
Sbjct: 501 SYQVLVSNCGALKERWDCVTDARTIMRDFGMEKVPGSSSIQVDREVHEFLAKDTRHHLRK 560
Query: 615 IVYSMLGEIGAQMK 628
+Y + + A ++
Sbjct: 561 EIYETIDGLTALIR 574
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 304/578 (52%), Gaps = 10/578 (1%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L + +K +H+ +L +G D A L K+ S F+ +
Sbjct: 351 VLNAFSGPAALKWGKTVHSHILNAGHESD-LAVGTALVKMYAKCGSYKDCRQVFEKLVNR 409
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D NT++ L + S Y +M + + N T+ +L C +L G+++
Sbjct: 410 DLIAWNTMIGG-LAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREI 468
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H+R+VK GF D+ V+N+LI MY+ CG + DAR +F D+++W +MI G K+
Sbjct: 469 HSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLG 528
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAA----NGLFDLMPFRDVVSWNCM 291
A +F M + + T+ S+++ ++ + + D N +
Sbjct: 529 AEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTL 588
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
++ Y+ G+V AR FDRM R++V++N ++ Y E L+LFDR+ KP++
Sbjct: 589 VNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDK 648
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ +++L ACAN G ++ + IHS + K D L +L++ YAKCG A VFD
Sbjct: 649 VTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDK 708
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M ++NV+SWN++I G HG+G+ L++F M+ G P+ TF+ +LSAC+HAG++ EG
Sbjct: 709 MMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEG 768
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
YF M R + I P +EHYGCMVDLLGRAG + + E L+ +P +A +WGALL AC
Sbjct: 769 RRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACR 828
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H N + + A+ ++L+P + YV LS++YA+ G WD LR++M+++ + K G
Sbjct: 829 IHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGR 888
Query: 592 SLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
S + G+ + E+ +Y+ L ++ MKM
Sbjct: 889 SWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKM 926
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 190/364 (52%), Gaps = 19/364 (5%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE--DGPVWD 222
K C ++ L G++VH I++ LD + N+LI+MY CG + +AR+V+ +
Sbjct: 149 KRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERT 208
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGL-F 277
+ +WN+M+ GYV+ + A +L M + + T ++S +E +
Sbjct: 209 VHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHV 268
Query: 278 DLMPFR---DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+ M R DV NC+++ YAK G++ AR FD+M ++VVSW I++ Y C
Sbjct: 269 EAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEI 328
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
+F +M + PN + ++VL A + + G+ +HS+I + D+ + T+L+
Sbjct: 329 AFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVK 388
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAKCG R VF+ + +++++WN+MI G G E+A E++ +M++ G PN T
Sbjct: 389 MYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKIT 448
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYK----IEPKVEHYGCMVDLLGRAGLMRDSEEL 510
++ +L+AC + + W ++ R+ K + V++ ++ + R G ++D+ L
Sbjct: 449 YVILLNACVNPTAL---HWGREIHSRVVKDGFMFDISVQN--ALISMYARCGSIKDARLL 503
Query: 511 VSKL 514
+K+
Sbjct: 504 FNKM 507
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 125/255 (49%), Gaps = 11/255 (4%)
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
A+ N M +L C + + G+ +H +I Q C + D +L+ MY +CG ++ A
Sbjct: 137 ARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTV-LDQYTVNALINMYIQCGSIEEA 195
Query: 406 RNVFD--NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
R V++ N TE+ V SWN+M++GY +G E+AL++ EM++ G AT + +LS+C
Sbjct: 196 RQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCK 255
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
LE + ++ V C++++ + G + ++ E+ K+ ++ + W
Sbjct: 256 SPS-ALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVS-W 313
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG----KWDEVENLRRI 579
++ + +SE+ + Q M+ E P ++ + A G KW + + +
Sbjct: 314 TIIIGGYADCGHSEIAFEIFQK-MQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHIL 372
Query: 580 MKEKELEKAVGSSLV 594
E + AVG++LV
Sbjct: 373 NAGHESDLAVGTALV 387
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 283/527 (53%), Gaps = 43/527 (8%)
Query: 145 YEKMMAKFVEHNHYTFP-LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y M+A+ + YTFP LL V A G VHA +VK G EL+ V +SL+ MY+
Sbjct: 6 YVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMYA 65
Query: 204 VCGEVLDARKVFEDGPVWD---LVTWNSMIDGYVKNRE--------VGFARELFDFMP-- 250
G+ AR + + P V WN++I G+ ++R+ V R P
Sbjct: 66 ARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVT 125
Query: 251 --------ERDIFTW---------------------NSMISGYVDVGDMEAANGLFDLMP 281
+D + W N++I Y + +M+AA LF+ M
Sbjct: 126 YITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGME 185
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
R+ VSW +I G+ ++G V AR FD M R+ VSW ++ YV+ + E L +F
Sbjct: 186 VRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFRE 245
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M + +E +++SV+TACA +G ++ G+W Y+ + IK D + +L+ MY+KCG
Sbjct: 246 MQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGS 305
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+ A VF M ++ +W ++I+G ++G GE+A+ MF M + P++ TFI VL+A
Sbjct: 306 IQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTA 365
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
CTHAG+V +G +F M Y I P V H+GC++DLLGRAG ++++ E + +PM A
Sbjct: 366 CTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSA 425
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+WG LL+AC H NSE+G++ A+HL+EL+ + Y+LLSN+YA +W++V LR+++
Sbjct: 426 IWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIM 485
Query: 582 EKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
EK ++K G SL+ E I + +YS L ++ +K
Sbjct: 486 EKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLK 532
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L V + FD + E D ++ ++ AL + E +K V + +T
Sbjct: 202 LGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSK-VRADEFTMVS 260
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ CA + +L G+ + + G ++D FV N+L+ MYS CG + A VF++ + D
Sbjct: 261 VVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRD 320
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM----PERDIFTWNSMIS-----GYVDVGD--ME 271
TW ++I G N A +F M D T+ +++ G VD G
Sbjct: 321 KFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFL 380
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ G + + P +V+ + C+ID + G + A M MR N W LLA
Sbjct: 381 SMTGSYGIAP--NVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLA 432
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 256/440 (58%), Gaps = 2/440 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N+L+ + G+ AR++F PV D+ +WN+M+ G K+ V A+ +F MP
Sbjct: 79 DVVSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMP 138
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFD 309
R+ +WN+M+SG+ GDM A F P + D V W M+ GY IGNV A F+
Sbjct: 139 VRNSVSWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFE 198
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVID 368
M +RN+VSWN ++A YV+ + LRLF M+R + +PN ++L SVL C+N+ +
Sbjct: 199 AMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALG 258
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ IH + K + ++ + TSL++MY KCG + A +F M ++VV+WN+MI GY
Sbjct: 259 FGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYA 318
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG G++A+ +F M+ G PN TF+ VL+AC H G+ G F+ MQ +Y IEP+V
Sbjct: 319 QHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRV 378
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+HY CMVDLL RAG + + + + +P E P+ +G LL+AC + N E ++ A L+E
Sbjct: 379 DHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIE 438
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+P+ G YV L+NIYA +WD+V +RR MK+ + K G S + E +
Sbjct: 439 KDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDR 498
Query: 609 PPHRKCIVYSMLGEIGAQMK 628
+ +++ LG++ +MK
Sbjct: 499 LHPQLYLIHEKLGQLAERMK 518
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 142/358 (39%), Gaps = 68/358 (18%)
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI-GNVTSARNCFDRMCMRNV 316
+ ++ V GD+ A F P + ++NC++ GYA+ G + AR+ FDR+ +V
Sbjct: 21 TAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDV 80
Query: 317 VSWNILLALYVRCKDYCECLRLF-----------DRMIRGDAKP---------------- 349
VS+N LL + D RLF + M+ G +K
Sbjct: 81 VSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVR 140
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
N S ++++ A G + + + + K D +L T++++ Y G + A F
Sbjct: 141 NSVSWNAMVSGFACSGDMSTAE---EWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYF 197
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMV 468
+ M +N+VSWN+++ GY + + AL +F M + PN +T VL C++ +
Sbjct: 198 EAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL 257
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
G K H CM LL R L + + G L S
Sbjct: 258 GFG---------------KQIHQWCMKLLLSR--------NLTVGTSLVSMYCKCGDLSS 294
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
AC E+ RD + + + YA G E NL MK++ +E
Sbjct: 295 ACILFG-------------EMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ +V ++ +F+ + + N ++ ++ + AL + + V+ N T
Sbjct: 187 IGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSS 246
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ C+ + +L GK++H +K +L V SL+ MY CG++ A +F + D
Sbjct: 247 VLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRD 306
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF-TWNSMI--------SGYVDVGD--ME 271
+V WN+MI GY ++ + A LF+ M + + W + + +G D G E
Sbjct: 307 VVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFE 366
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
L+ + P D ++CM+D + G + A
Sbjct: 367 GMQELYGIEPRVD--HYSCMVDLLCRAGKLERA 397
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 271/507 (53%), Gaps = 43/507 (8%)
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L K C R+L+EGK+VHA I G + L++ N L+ MY+ CG ++DA KVF++ D
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRD 183
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
L +WN MI GYVK AR LFD MP RD F+W ++ISG V E A L+ LM
Sbjct: 184 LCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQK 243
Query: 283 RDV----------------------------------------VSWNCMIDGYAKIGNVT 302
D V W ++D Y K G++
Sbjct: 244 HDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIE 303
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR FD+M R+VVSW ++ Y++ E LF ++ + PN+ + VL ACA
Sbjct: 304 EARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACA 363
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
++ D+G+ IH+Y+ + +++L+ MY+KCG ++ A++VF+ + + ++ SW S
Sbjct: 364 DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTS 423
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+++GY HGQ +KAL F + K G P+ FI VLSAC HAG+V +G YF ++ +
Sbjct: 424 LLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKH 483
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
+ ++HY C++DLL RAG ++E +++++P++ +W ALL C H N EL K
Sbjct: 484 GLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRA 543
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFAS 601
A+ L E+EP +P YV L+NIYAS G E N+R M + + K G S + E
Sbjct: 544 AKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHV 603
Query: 602 ESIVENCPPHRKCIVYSMLGEIGAQMK 628
S+ +N P K I+ L E+ +MK
Sbjct: 604 FSVGDNSHPKSKEIL-EYLSELSKRMK 629
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 176/374 (47%), Gaps = 21/374 (5%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + D F I+ + N P AL Y + + N T A I
Sbjct: 206 LFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIP 265
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SL GKK+H I++ G + D V SL+ MY CG + +AR +F+ D+V+W +MI
Sbjct: 266 SLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIH 325
Query: 232 GYVKN--REVGFA--RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------P 281
Y+KN RE GFA R L + + FT+ +++ D+ + + M
Sbjct: 326 TYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDS 385
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
F S ++ Y+K G++ +A++ F+ + ++ SW LL Y + + + L F+
Sbjct: 386 FSSAAS--ALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFEL 443
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+++ KP+ + + VL+ACA+ G++D G ++ HS +K + + ++ + A+ G
Sbjct: 444 LLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAG 503
Query: 401 VMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGE---KALEMFMEMEKRGPTPNDATFI 456
A ++ + M K + W +++ G +HG E +A + E+E P AT++
Sbjct: 504 QFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENP----ATYV 559
Query: 457 CVLSACTHAGMVLE 470
+ + AGM E
Sbjct: 560 TLANIYASAGMRAE 573
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 296/542 (54%), Gaps = 69/542 (12%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF---- 112
++P++ L+ C ++ E QIH Q++ + L F SR++ C SLS VS + +
Sbjct: 6 TNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIA-FC-SLSGVSGGLDYASSV 63
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F IQ P++F+ ++K F ++P +L Y
Sbjct: 64 FSRIQHPNSFIFFALIKGFSDTSNPVESLILY---------------------------- 95
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
AR++ C V S+ + CG++L F++G + G
Sbjct: 96 --------ARMLSC-LNYSSGVEFSIPSVLKACGKLL----AFDEG---------RQVHG 133
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
V + F D F NSM+ Y+D G++E A +FD MP RDVVSWN MI
Sbjct: 134 QVLKTHLWF-----------DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMI 182
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
GY K G + A+ F+ M ++VV+W +++ YV+ + + L LF M+ +P+
Sbjct: 183 AGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGP 242
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+++SVL+A A++G ++ G+W+H+Y+ +I+ + ++L+ MY+KCG ++ A +VF +
Sbjct: 243 AIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRS 302
Query: 412 MTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
++ + N+ WNSMI G +HG +AL++F+EME+ PN+ TF+ +LS C+H G+V E
Sbjct: 303 ISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEE 362
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G +YF+ M YKI P+++HYGCM+DL GRAG + D+ ++ +P EA W A+LSA
Sbjct: 363 GQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSAS 422
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H + E+GK A +EL P D YVLLSNIYA G+WD+V +R +M+++ ++K G
Sbjct: 423 MKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAG 482
Query: 591 SS 592
S
Sbjct: 483 CS 484
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 219/335 (65%), Gaps = 1/335 (0%)
Query: 259 SMISGYVDVGDMEAANGLFD-LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
S++ Y G + +A +FD DVVSWN MIDGY K G++ AR FD M RNVV
Sbjct: 115 SLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKSGDLARARELFDVMPGRNVV 174
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SW +++ Y + K E + +F RM +P+ +L+SVL+AC ++GV+D+G+W+H ++
Sbjct: 175 SWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFV 234
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ + ++ L +++ MY KCG + A VF+ M +K++V+W +MI G+ +HG G +A+
Sbjct: 235 LRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGLEAV 294
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
E+F MEK +PND TF+ VLS C+H G+ G WYF M YKI+P+VEHYGCM+DL
Sbjct: 295 ELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDL 354
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG + ++ L+ +P +A A+WGALL+A TH ++ELG+ HL+ELEP + G Y
Sbjct: 355 LGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHNSGNY 414
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+LLSNIYA + +WD V LR M+++ L G+S
Sbjct: 415 ILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 449
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 150/312 (48%), Gaps = 45/312 (14%)
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF-EDGPVWDLVTWNSMIDGYVKN 236
++H+ +V+ G D SL+ Y CG V AR+VF E D+V+WN MIDGYVK+
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR------------- 283
++ ARELFD MP R++ +W +I Y + E A +F M
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 284 ---------DVVSW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
D+ W N +ID Y K G+V A F+ M +++V
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW-IHSY 376
+W ++A + E + LF RM + + PN+ + ++VL+ C+++G+ D+G+W +
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 335
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ--- 432
+ + +IKP V ++ + + G + AR + +M K N W +++ HG
Sbjct: 336 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 395
Query: 433 GEKALEMFMEME 444
GE+AL +E+E
Sbjct: 396 GEQALLHLIELE 407
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 116/290 (40%), Gaps = 40/290 (13%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H+ L+ +G + D A++ +++ C+ S S +F + D N ++ ++
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 135 NDPFGALSFY------------------------------YEKMMAKFVEHNHYTFPLLG 164
D A + + +M + +E + +
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
C + + G+ VH +++ G ++ + N++I MY CG V A +VFE +V
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM 280
TW +MI G+ + A ELF M + ++ T+ +++S VG + F M
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 335
Query: 281 PFR-----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ V + CMID + G + AR M + N W LLA
Sbjct: 336 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLA 385
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 290/566 (51%), Gaps = 70/566 (12%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++ T+ QIH L GL + L++ SL + SV F Q P F
Sbjct: 37 IDKSKTISHLLQIHAVLFRHGLDHHPILNFK-LQRSYASLGRLDYSVALFGRTQNPSVFF 95
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
I+ + AL+FY A++
Sbjct: 96 WTAIIHGHALRGLHEQALNFY------------------------------------AQM 119
Query: 184 VKCGFELDLFVRNSLIHMYSV-CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+ G E + F +S++ + + G+ L ++ V ++GF
Sbjct: 120 LTQGVEPNAFTFSSILKLCPIEPGKALHSQAV-----------------------KLGF- 155
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
+ D++ ++ Y GD+ +A LFD MP + +VS M+ YAK G +
Sbjct: 156 --------DSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 207
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+AR FD M R+ V WN+++ Y + E L LF RM++ AKPNE +++SVL+AC
Sbjct: 208 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 267
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G ++ G+W+HSYI+ I+ +V + T+L+ MY+KCG ++ AR VFD + +K+VV+WNS
Sbjct: 268 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 327
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
MI+GY MHG ++AL++F M + G P + TFI +LSAC H+G V EGW F+ M+ Y
Sbjct: 328 MIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 387
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
IEPK+EHYGCMV+LLGRAG + + ELV + +E P LWG LL AC H LG+ +
Sbjct: 388 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKI 447
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASE 602
+ L++ + G Y+LLSNIYA+ G WD V LR +MK+ ++K G S + E
Sbjct: 448 VELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 507
Query: 603 SIVENCPPHRKCIVYSMLGEIGAQMK 628
+ ++ +Y ML EI +K
Sbjct: 508 FLAGGLNHPKRKEIYMMLEEINGWLK 533
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 309/573 (53%), Gaps = 16/573 (2%)
Query: 68 STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
ST Q+H L+ L D+F + +LK+ S L F Q P+ F+ NT+
Sbjct: 24 STFNHLKQVHVSLIHHHLHHDTFLVNLLLKR-TLFFRQTHYSFLLFSHTQFPNIFLYNTL 82
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ F+ N F + + + + +TFPL+ K C + + G +H+ +VKCG
Sbjct: 83 INGFVN-NHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCG 141
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV---KNREVGFARE 244
F D+ SL+ +YS G + DA KVFE+ P +VTW ++ GY K+RE A +
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHRE---AID 198
Query: 245 LFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMIDGYA 296
LF M E D + ++S V VGD+++ + M ++ +++ YA
Sbjct: 199 LFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYA 258
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G + AR+ FD M +++V+W+ ++ Y E + F +M++ + KP++ S++
Sbjct: 259 KCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVG 318
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
L++CA++G +D+G+W S I + ++ ++ +L+ MYAKCG M VF M EK+
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+V N+ I G +G + + +F + EK G +P+ +TF+ +L C HAG++ +G +F+
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
+ +Y ++ VEHYGCMVDL GRAG++ D+ L+ +PM +WGALLS C ++
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
+L + V + L+ LEP + G YV LSNIY+ G+WDE +R +M K ++K G S +
Sbjct: 499 QLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIEL 558
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
E + ++ +Y+ L ++G +M++
Sbjct: 559 EGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 316/582 (54%), Gaps = 23/582 (3%)
Query: 34 LWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCS---TVKEFHQIHTQLLVSGLSQDSF 90
L A PKP+ + DL + L+SC+ + + ++HT LL +
Sbjct: 7 LRAVIPKPQQHHHHCRGFSTYDLG-TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPL 65
Query: 91 AASRVLKKLCT-SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMM 149
A + ++ SL SL V F + F N ++ FL P AL+ Y +M
Sbjct: 66 AITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALY-NQMR 124
Query: 150 AKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL 209
+ + +TFP + + C K+H + K G ELD+FV ++L++ Y V
Sbjct: 125 HLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVG 184
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYV 265
+A +VFE+ PV D+V WN+M++G+ + A +F M + +T ++S +
Sbjct: 185 EAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFS 244
Query: 266 DVGDME---AANGLFDLMPFRD-VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+GD + A +G M + VV N +ID Y K V A + F+ M ++ SWN
Sbjct: 245 VMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNS 304
Query: 322 LLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVIDIGQWIHSYI--- 377
+++++ RC D+ LRLFDRM+ +P+ ++ +VL AC ++ + G+ IH Y+
Sbjct: 305 IMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVN 364
Query: 378 -----QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+ + DVLL+ +L+ MYAKCG M AR VF NM EK+V SWN MI GYGMHG
Sbjct: 365 GLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGY 424
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G +AL++F M + PN+ +F+ +LSAC+HAGMV EG + M+ Y + P +EHY
Sbjct: 425 GGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYT 484
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C++D+L RAG + ++ +LV +P +A P W +LL+AC H++++L ++ A ++ELEP
Sbjct: 485 CVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPD 544
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G YVL+SN+Y G+++EV R MK++ ++K G S +
Sbjct: 545 HCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWI 586
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 286/526 (54%), Gaps = 8/526 (1%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+HT ++ +GL + + S L L +V + + FD + N+++ +
Sbjct: 219 QVHTVVVKNGLDK-TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
AL +Y M V + +F + K+CA ++ LR +++H +VK GF D +
Sbjct: 278 GLDLEALGMFYS-MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336
Query: 195 RNSLIHMYSVCGEVLDARKVF-EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
R +L+ YS C +LDA ++F E G + ++V+W +MI G+++N A LF M +
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396
Query: 254 I----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+ FT++ +++ + E + R ++D Y K+G V A F
Sbjct: 397 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFS 456
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA-NMGVID 368
+ +++V+W+ +LA Y + + +++F + +G KPNE + S+L CA +
Sbjct: 457 GIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMG 516
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ H + K R+ + +S++LLTMYAK G ++ A VF EK++VSWNSMI GY
Sbjct: 517 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYA 576
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HGQ KAL++F EM+KR + TFI V +ACTHAG+V EG YFD+M R KI P
Sbjct: 577 QHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 636
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EH CMVDL RAG + + +++ +P AG +W +L+AC H +ELG++ A+ ++
Sbjct: 637 EHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIA 696
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ P D YVLLSN+YA G W E +R++M E+ ++K G S +
Sbjct: 697 MIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 742
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 201/435 (46%), Gaps = 19/435 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLM--LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD ++E + T++ + LN+ L + +M + + N +TF V A
Sbjct: 155 FDEMKERNVVTWTTLISGYARNSLNEEVLTL---FMRMQDEGTQPNSFTFAAALGVLAEE 211
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
G +VH +VK G + + V NSLI++Y CG V AR +F+ V +VTWNSMI
Sbjct: 212 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 271
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLF-DLMPFRDV 285
GY N A +F M + ++ S+I ++ ++ L ++ + V
Sbjct: 272 SGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFV 331
Query: 286 VSWN---CMIDGYAKIGNVTSARNCFDRMC-MRNVVSWNILLALYVRCKDYCECLRLFDR 341
N ++ Y+K + A F + NVVSW +++ +++ E + LF
Sbjct: 332 FDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSE 391
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M R +PNE + +LTA + VI + +H+ + K + + T+LL Y K G
Sbjct: 392 MKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGK 447
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+D A VF + K++V+W++M+ GY G+ E A+++F E+ K G PN+ TF +L+
Sbjct: 448 VDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNV 507
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C + F +++ + ++ + + G + +EE V K E
Sbjct: 508 CAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEE-VFKRQREKDLV 566
Query: 522 LWGALLSACSTHSNS 536
W +++S + H +
Sbjct: 567 SWNSMISGYAQHGQA 581
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 19/300 (6%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++H + +K GF D+ V SL+ Y D R VF++ ++VTW ++I GY +
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYAR 175
Query: 236 N-------------REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
N ++ G F F + + + V + NGL +P
Sbjct: 176 NSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 235
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
N +I+ Y K GNV AR FD+ +++VV+WN +++ Y E L +F M
Sbjct: 236 S-----NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 290
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC-GV 401
+ +E+S S++ CAN+ + + +H + K D + T+L+ Y+KC +
Sbjct: 291 RLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAM 350
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+D R + NVVSW +MI G+ + E+A+ +F EM+++G PN+ T+ +L+A
Sbjct: 351 LDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 39/272 (14%)
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF----------DLMP 281
G + + +A LFD P+RD ++ S++ G+ G + A LF D
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 282 FR-----------------------------DVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
F DV ++D Y K N RN FD M
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RNVV+W L++ Y R E L LF RM +PN + + L A GV G
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H+ + K + + +S SL+ +Y KCG + AR +FD K+VV+WNSMI GY +G
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
+AL MF M ++++F ++ C +
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCAN 311
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
G A + A N FD+ R+ S+ LL + R E RLF + + + +
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
SVL A + G+ +H K DV + TSL+ Y K RNVFD M
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
E+NVV+W ++I GY + E+ L +FM M+ G PN TF L G+ G
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
++ + ++ + +++L + G +R + L K +++ W +++S
Sbjct: 220 VHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISG 273
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/469 (38%), Positives = 265/469 (56%), Gaps = 19/469 (4%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
ALS Y +M+ N +TFP K CA + G + H +I K G + FV+ LI
Sbjct: 33 ALSLY-PQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVT--WNSMIDGYVKNREVGFARELFDFMPERDI--- 254
MY V +ARKVFE+ +T +N+++ GYV N + A LF M E +
Sbjct: 92 SMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVN 151
Query: 255 -FTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
T +I V ++E + L FD DV NC I Y K G+V A+
Sbjct: 152 SVTLLGLIPACVSPINLELGSSLHCSTLKYGFD----SDVSVVNCFITMYMKCGSVNYAQ 207
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FD M ++ ++SWN +++ Y + L L+ M P+ +L+ VL++CAN+G
Sbjct: 208 KLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLG 267
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+G + IQ + L+ +L+ MYA+CG + A+ VFD M E+ +VSW ++I
Sbjct: 268 AQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIG 327
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GYGMHG GE A+++F EM + G P+ F+CVLSAC+HAG+ +G YF +M+R Y++E
Sbjct: 328 GYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLE 387
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P EHY CMVDLLGRAG +++++ L+ +P++ A+WGALL AC H N EL ++ +
Sbjct: 388 PGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFER 447
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ELEP + G YVLLSNIY++ V +R +MKEK+L+K G S V
Sbjct: 448 VIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 177/403 (43%), Gaps = 26/403 (6%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q H Q+ G + F + ++ C + +F + +C + S +
Sbjct: 70 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N + +M + V N T L C +L G +H +K GF+ D+ V
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP---- 250
N I MY CG V A+K+F++ PV L++WN+M+ GY +N EL+ M
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVT 302
D T ++S ++G + + F PF + N +I+ YA+ GN+T
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLN----NALINMYARCGNLT 305
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
A+ FD M R +VSW ++ Y ++LF MIR +P+ + + VL+AC+
Sbjct: 306 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 365
Query: 363 NMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSW 420
+ G+ D G ++ + +++P + ++ + + G + A+ + ++M K + W
Sbjct: 366 HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 425
Query: 421 NSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
+++ +H E A E +E+E P + + +LS
Sbjct: 426 GALLGACKIHKNVELAELAFERVIELE-----PENIGYYVLLS 463
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 319 WNILL-ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN L L RC+ + + L L+ +M+R +PN + L +CA + + +G H I
Sbjct: 17 WNTQLRELAKRCQ-FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 75
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQGEK 435
K + + T L++MY K ++D AR VF+ + K V +N+++ GY + + +
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ +F +M + G N T + ++ AC + + LE Y + V C +
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACV-SPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ + G + +++L ++P++ G W A++S
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVK-GLISWNAMVSG 227
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 307/571 (53%), Gaps = 20/571 (3%)
Query: 75 QIHTQLLVSGL--SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF- 131
QIH LL S + ++ SR+L++ CT+ + + +Q + ++++ F
Sbjct: 19 QIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFS 78
Query: 132 --LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+ LN L+ Y M V + +TFP L K +R + HA IVK G +
Sbjct: 79 GGITLNRRLSFLA--YRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLD 135
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
D FVRNSLI YS G A ++F+ D+VTW +MIDG+V+N A F M
Sbjct: 136 SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 250 PERDI----FTWNSMISGYVDVGDME---AANGLFDLMPFR---DVVSWNCMIDGYAKIG 299
+ + T S++ V D+ + +GL+ L R DV + ++D Y K
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY-LETGRVKCDVFIGSSLVDMYGKCS 254
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
A+ FD M RNVV+W L+A YV+ + + + + +F+ M++ D PNE +L SVL+
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA++G + G+ +H Y+ K I+ + T+L+ +Y KCG ++ A VF+ + EKNV +
Sbjct: 315 ACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT 374
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W +MI G+ HG A ++F M +PN+ TF+ VLSAC H G+V EG F M+
Sbjct: 375 WTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK 434
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ +E K +HY CMVDL GR GL+ +++ L+ ++PME +WGAL +C H + ELG
Sbjct: 435 GRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELG 494
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGE 598
K A +++L+P G Y LL+N+Y+ WDEV +R+ MK++++ K+ G S + G+
Sbjct: 495 KYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGK 554
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
++ P +Y L +G QM++
Sbjct: 555 LCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 290/521 (55%), Gaps = 41/521 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D N ++ + AL + M +K V + T+ CA +
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD-MQSKGVRLDSTTYTSSLTACARLS 284
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SLR GK++HA++++ +D +V ++L+ +Y+ G +A+ VF + V W +I
Sbjct: 285 SLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLIS 344
Query: 232 GYVKNREVGFARELFDFMPE---------------------------------------R 252
G+++ + ELF+ M +
Sbjct: 345 GFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQ 404
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+ NS+IS Y ++++A +F M +D+VSW MI Y+++GNV AR FD M
Sbjct: 405 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 464
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVIDIGQ 371
+NV++WN +L Y++ + LR++ M+ + +P+ + +++ CA++G +G
Sbjct: 465 EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 524
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
I K + D ++ +++TMY+KCG + AR VFD + K++VSWN+MI GY HG
Sbjct: 525 QIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
G++A+E+F ++ KRG P+ +++ VLS C+H+G+V EG +YFD+M+R + I P +EH+
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF 644
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
CMVDLLGRAG + ++++L+ +PM+ +WGALLSAC H N+EL ++ A+H+ EL+
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS 704
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
D G Y+L++ IYA GK D+ +R++M++K ++K G S
Sbjct: 705 PDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 201/472 (42%), Gaps = 47/472 (9%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
V L + +L SC + + + LL+ ++ + V+ L +S +V F
Sbjct: 39 VFLQNTLLHAYLSCGALSDARR----LLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELF 94
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+ D NT+M + +L + + N +T K C +
Sbjct: 95 GRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWH 154
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
++ A + K + D V +L+ M+ CG V A ++F + NSM+ GY
Sbjct: 155 SLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGY 214
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-EAANGLFDL------------- 279
VK V A ELFD MPERD+ +WN M+S G + EA + + D+
Sbjct: 215 VKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYT 274
Query: 280 -------------------------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+P D + +++ YAK G A+ F+ + R
Sbjct: 275 SSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDR 334
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
N V+W +L++ +++ + E + LF++M ++ +L ++++ C + + +G+ +H
Sbjct: 335 NNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLH 394
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S K V++S SL++MYAKC + A +F M EK++VSW SMI Y G
Sbjct: 395 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVA 454
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
KA E F M ++ N T+ +L A G +G + +M + P
Sbjct: 455 KAREFFDGMSEK----NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 502
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 173/386 (44%), Gaps = 57/386 (14%)
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK-VFEDGPVWDLVTWNSMIDGYVKNRE 238
H R+V G +F++N+L+H Y CG + DAR+ + D +++T N M++GY K
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF----RDVVSWNCMIDG 294
+ A ELF MP RD+ +WN+++SGY ++ L L F R SW
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGY-----FQSRQYLVSLETFLSMHRSGDSWP----- 136
Query: 295 YAKIGNVTSARNCFDRMCMR---NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
N F C + W+ L + L + + D
Sbjct: 137 -----------NAFTLACAMKSCGALGWHSLA---------LQLLAMVQKFDSQDDSEVA 176
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
A+L+ + C G +D+ + I+ +P + S+L Y K +D A +FD+
Sbjct: 177 AALVDMFVRC---GAVDLASRLFVRIK----EPTMFCRNSMLAGYVKTYGVDHALELFDS 229
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M E++VVSWN M+ G+ +AL+M ++M+ +G + T+ L+AC +
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR-- 287
Query: 472 WWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS- 528
W L ++ + P ++ Y +V+L ++G ++++ + + L A W L+S
Sbjct: 288 -WGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISG 345
Query: 529 ----ACSTHSNSELGKIVAQHLMELE 550
C T S ++ A+ LM L+
Sbjct: 346 FLQYGCFTESVELFNQMRAE-LMTLD 370
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 15/297 (5%)
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
+ + +V+ + FFDG+ E + N ++ +++ L Y + ++V + T+
Sbjct: 448 SQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTY 507
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
L K CA + + + G ++ R VK G +D V N++I MYS CG +L+ARKVF+ V
Sbjct: 508 VTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNV 567
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGL 276
D+V+WN+MI GY ++ A E+FD + +R D ++ +++SG G ++
Sbjct: 568 KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFY 627
Query: 277 FDLMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVS-WNILLALYVRCK 330
FD+M +S ++CM+D + G++T A++ D M M+ W LL+ CK
Sbjct: 628 FDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLS---ACK 684
Query: 331 DYC--ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ E L + + P+ S M + A+ G D I ++ IK +
Sbjct: 685 IHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 741
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 296/541 (54%), Gaps = 19/541 (3%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
+++ IH + +V G+S + A+ +L + + S++ + FD DA+M NT++
Sbjct: 33 SLRALLPIHARAIVLGVSANPAFATSLLAGVAPA--SLAYARRVFDATPVRDAYMWNTLL 90
Query: 129 K--SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC 186
+ S L+ L+ Y ++M A V +HYT+P++ CA R L G+ VH +V+
Sbjct: 91 RAHSHSQLSHAADTLALY-KRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVRF 149
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFED--GPVWDLVTWNSMIDGYVKNREVGFARE 244
D FV ++LI MY GEV DA VF + G +V+W SM+ GYV+N G A
Sbjct: 150 ALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVA 209
Query: 245 LFDFM-------PERDIFTWNSMISG--YVDVGDMEAANGLFDLMPF-RDVVSWNCMIDG 294
LF M E + ++ + G ++D G+M +G + F ++ N +I
Sbjct: 210 LFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEM--VHGFVIRLGFDANIPLANALIAM 267
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y K G++ A+ F+ M R++ SWN ++A+Y + D E ++ F RM+ + +L
Sbjct: 268 YGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTL 327
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+SVL+ACA G + G+W+H + + D + L+ MYAKCG + ARNVFD +
Sbjct: 328 VSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRM 387
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
++VVSW++MI Y HG E+AL++F M+ G PN TF VL AC H+G+V EG +
Sbjct: 388 RSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEEGLKH 447
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F+ + Y++ P +EHY CMVD+LGRAG + ++ E++ + + +WGA L+ C H
Sbjct: 448 FNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCVWGAFLAGCKLHG 507
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N EL + VA+ L + D YVL+SN+Y G + E +R MKE EL K G S +
Sbjct: 508 NLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKDAERMRWAMKEMELNKTAGRSAI 567
Query: 595 H 595
+
Sbjct: 568 N 568
>gi|224092607|ref|XP_002309680.1| predicted protein [Populus trichocarpa]
gi|222855656|gb|EEE93203.1| predicted protein [Populus trichocarpa]
Length = 500
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 269/477 (56%), Gaps = 2/477 (0%)
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P+ N I+K ++ D A+ Y F N +TFP+L K S G
Sbjct: 13 PEMRQWNEIIKKHVLNGDAVQAMVTYVNVQEIGFHADN-FTFPILLKAAGSWSSPCIGLA 71
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H + +K GF +FV+ +L++MY V DA KVFE PV D+V WNS++D Y +
Sbjct: 72 LHGQTIKAGFSSHVFVQTALLNMYRSHSCVADACKVFEKMPVKDVVAWNSILDAYASTDQ 131
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ A ++F+ MP +D+ ++N MISGY +G +A +FD M +D+VSWN MI Y +
Sbjct: 132 MDDALKVFNSMPLKDLSSFNIMISGYSSIGKTLSARSIFDNMAEKDIVSWNSMISAYIQG 191
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
++ A + F M +N+++WN ++ +++ + Y E L LFD M + P+ ++ VL
Sbjct: 192 EDMERACDLFREMPAKNIITWNTMVKGFLQNQLYAEVLDLFDEMKTTNCLPDYLTVTGVL 251
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+ACA+ G + G +H Y + ++T+L+ MYAKCG + VF K++
Sbjct: 252 SACAHSGSLKKGTEVHIYAIDNGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIY 311
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
WN++I G +HG G AL +F +M K P+D TFI +LSAC+H+G+V EG F M
Sbjct: 312 CWNALISGLALHGHGYAALNIFNKMRKNHTRPDDITFIGLLSACSHSGLVQEGSQLFYSM 371
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
Q+ + I PK+EHYGCMVDLL RA + + +L+ +P + G A+ GALLSAC H + E+
Sbjct: 372 QKEFGISPKIEHYGCMVDLLSRARHLDCALQLIKTMPFKPGEAILGALLSACIVHQDLEV 431
Query: 539 GKIVAQHLMEL-EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G+ V + + G ++ SN+YAS G+W+E R +M + + K G S+V
Sbjct: 432 GERVVKLVSSRGNYLSDGELMMFSNLYASCGQWEEANKWREMMNDTGIVKTAGFSVV 488
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 245/413 (59%), Gaps = 15/413 (3%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGP--------------VWDLVTWNSMIDGYVKNREVGF 241
N+LI Y G V DAR++F+ P ++V+WNSM+ Y++ +V
Sbjct: 228 NTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCS 287
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
ARE+F+ MP++D+ +WN+MI+GY V DME A LF MP D+VSWN +I G+ + G+V
Sbjct: 288 AREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDV 347
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDRM R +SWN +++ Y + Y + LF +M+ P+ + SVL AC
Sbjct: 348 EHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAAC 407
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A++ ++ +G +H I+K + PD S +L+TMY++ G + A +F M +K++VSWN
Sbjct: 408 ASLPMLRLGAQLHQLIEKSFL-PDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWN 466
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
++I GY HG +AL++F +M P TFI +LSAC +AG+V EGW FD M
Sbjct: 467 ALIGGYEHHGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFDTMIHE 526
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y I ++EHY +V+L+GR G + D+ E+++ +P+ ++WGA L AC+ N L +
Sbjct: 527 YSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIAPDRSVWGAFLGACTAKKNELLAHM 586
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A+ L +++P PYVL+ N++A EG+W +R M+++ + K G S +
Sbjct: 587 AAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWI 639
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 179/414 (43%), Gaps = 79/414 (19%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---REVGFARELFDFMPER 252
NS + + +V AR F PV D V+WN+++ Y ++ + AR LFD MP+R
Sbjct: 65 NSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLAAARRLFDEMPQR 124
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D TWN+++ YV G M A LFD MP R+V SWN M+ G+ G V A + FD M
Sbjct: 125 DAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALDMFDAMP 184
Query: 313 MRNVVS------------------------------------WNILLALYVRCKDYCECL 336
+++ S +N L+A Y + +
Sbjct: 185 VKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDAR 244
Query: 337 RLFDRMIRGDAK----------PNEASLMSVLTACANMGVI-------------DIGQW- 372
RLFD + RG + N S S++T G + D+ W
Sbjct: 245 RLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIFNEMPDKDLVSWN 304
Query: 373 --IHSYIQKCRIK-----------PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
I Y + ++ PD++ ++ + + G ++ AR FD M E+ +S
Sbjct: 305 TMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARGFFDRMPERGTIS 364
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI GY +G + A+E+F +M + G TP+ TF VL+AC M+ G L++
Sbjct: 365 WNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPMLRLGAQLHQLIE 424
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+ + P ++ + R G + D+E + ++P + W AL+ H
Sbjct: 425 KSFL--PDTATSNALMTMYSRGGALTDAEAIFKQMP-QKDLVSWNALIGGYEHH 475
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 98/424 (23%)
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN---VT 302
FD +P R + TWNS ++ D+ AA F MP RD VSWN ++ Y++ N +
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLA 112
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+AR FD M R+ V+WN LL YVR E +LFD M + N AS +++T
Sbjct: 113 AARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEM----PQRNVASWNTMVTGFF 168
Query: 363 NMGVID----------------IGQWIHSYIQKCRI-KPDVLLS---------------T 390
+ G ++ +G + +I+ R+ + + LL+
Sbjct: 169 SAGQVNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYN 228
Query: 391 SLLTMYAKCGVMDLARNVFD---------------------------------------- 410
+L+ Y + G + AR +FD
Sbjct: 229 TLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSA 288
Query: 411 -----NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
M +K++VSWN+MI GY E+A ++F EM P P+ ++ ++ T
Sbjct: 289 REIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEM----PDPDIVSWNLIIRGFTQK 344
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA---- 521
G V +FD M I + M+ + G + EL +K+ +EAG
Sbjct: 345 GDVEHARGFFDRMPERGTIS-----WNTMISGYEQNGHYDGAIELFTKM-LEAGGTPDRH 398
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+ ++L+AC++ LG + Q + + D L +Y+ G + E + + M
Sbjct: 399 TFSSVLAACASLPMLRLGAQLHQLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMP 458
Query: 582 EKEL 585
+K+L
Sbjct: 459 QKDL 462
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 49/266 (18%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
DL N++I Y+ ++ +A K+F + P D+V+WN +I G+ + +V AR FD MP
Sbjct: 299 DLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARGFFDRMP 358
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLM------PFR--------------------- 283
ER +WN+MISGY G + A LF M P R
Sbjct: 359 ERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPMLRLGAQ 418
Query: 284 -----------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
D + N ++ Y++ G +T A F +M +++VSWN L+ Y
Sbjct: 419 LHQLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEHHGCA 478
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW------IHSYIQKCRIKPDV 386
E L+LF+ M P + +S+L+AC N G++ G W IH Y RI+
Sbjct: 479 TEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEG-WMVFDTMIHEYSIAARIEH-- 535
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+ + + G +D A V ++M
Sbjct: 536 --YAALVNLIGRHGQLDDALEVINSM 559
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + E NT++ + GA+ + KM+ + +TF + CA +
Sbjct: 353 FFDRMPERGTISWNTMISGYEQNGHYDGAIELF-TKMLEAGGTPDRHTFSSVLAACASLP 411
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
LR G ++H ++++ F D N+L+ MYS G + DA +F+ P DLV+WN++I
Sbjct: 412 MLRLGAQLH-QLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIG 470
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
GY + A +LF+ M + T+ S++S + G + +FD M ++
Sbjct: 471 GYEHHGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIA 530
Query: 288 WNCMIDGYAKIGNVTSARNCFD 309
I+ YA + N+ D
Sbjct: 531 --ARIEHYAALVNLIGRHGQLD 550
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 269/472 (56%), Gaps = 11/472 (2%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA ++L + +KVHA + F D F+ NSLIH+Y CG VL+ARKVF++ D+V+
Sbjct: 60 ACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVS 119
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
W S+I GY +N +G + + + FT+ S++ D + L
Sbjct: 120 WTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAV 179
Query: 282 ----FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
DV + ++D YA+ G + A FD++ +N VSWN L++ + R D L
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
F M+R + + SV ++ A +G ++ G+W+H+++ K R K +LL MYA
Sbjct: 240 TFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYA 299
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
K G M AR VFD + +K++V+WN+M+ + +G G++A+ F EM K G N TF+C
Sbjct: 300 KSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLC 359
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+L+AC+H G+V EG YF++M+ Y +EP+++H+ +V LLGRAGL+ + + K+P+E
Sbjct: 360 ILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIE 418
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A+WGALL+AC H N+++G+ A H+ EL+P D GP VLL NIYAS G+WD +R
Sbjct: 419 PTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVR 478
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPH-RKCIVYSMLGEIGAQMK 628
RIMK ++K S V E + V N H R +Y M G+I +++
Sbjct: 479 RIMKTTGVKKEPACSWVEM-ENSVHMFVANDDTHPRAEEIYKMWGQISKKIR 529
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 188/411 (45%), Gaps = 14/411 (3%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P + H + +++ ++H L S + D+F + ++ C SV +
Sbjct: 49 PTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYC-KCGSVLEARK 107
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD ++ D +++ + + P A+ + +F + N +TF L K
Sbjct: 108 VFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRF-KPNGFTFASLLKAAGAHA 166
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
G+++HA VKC + D++V ++L+ MY+ CG + A VF+ + V+WN++I
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226
Query: 232 GYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLM----PFR 283
G+ + + A F M E FT++S+ S +G +E + M
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKM 286
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+ N ++D YAK G++ AR FDR+ +++V+WN +L + + E + F+ M
Sbjct: 287 TAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMR 346
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ N+ + + +LTAC++ G++ G+ +++ ++P++ +++ + + G+++
Sbjct: 347 KSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLN 406
Query: 404 LARN-VFDNMTEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
A +F E W +++ MH G+ A + E++ P
Sbjct: 407 FALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGP 457
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
LR D + G+ P + +TACA ++ + +H+++ R D L SL+ +
Sbjct: 36 LRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHL 95
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG + AR VFD M K++VSW S+I GY + E+A+ + M K PN TF
Sbjct: 96 YCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTF 155
Query: 456 ICVLSAC-THAGMVLEGWWYFDLMQRIYKIEPKVEHY------GCMVDLLGRAGLMRDSE 508
+L A HA + ++I+ + K + + ++D+ R G+M +
Sbjct: 156 ASLLKAAGAHADS--------GIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMAT 207
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ KL + G + W AL+S + + E
Sbjct: 208 AVFDKLDSKNGVS-WNALISGFARKGDGE 235
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 290/521 (55%), Gaps = 41/521 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D N ++ + AL + M +K V + T+ CA +
Sbjct: 246 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD-MQSKGVRLDSTTYTSSLTACARLS 304
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SLR GK++HA++++ +D +V ++L+ +Y+ G +A+ VF + V W +I
Sbjct: 305 SLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLIS 364
Query: 232 GYVKNREVGFARELFDFMPE---------------------------------------R 252
G+++ + ELF+ M +
Sbjct: 365 GFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQ 424
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+ NS+IS Y ++++A +F M +D+VSW MI Y+++GNV AR FD M
Sbjct: 425 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 484
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVIDIGQ 371
+NV++WN +L Y++ + LR++ M+ + +P+ + +++ CA++G +G
Sbjct: 485 EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 544
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
I K + D ++ +++TMY+KCG + AR VFD + K++VSWN+MI GY HG
Sbjct: 545 QIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 604
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
G++A+E+F ++ KRG P+ +++ VLS C+H+G+V EG +YFD+M+R + I P +EH+
Sbjct: 605 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF 664
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
CMVDLLGRAG + ++++L+ +PM+ +WGALLSAC H N+EL ++ A+H+ EL+
Sbjct: 665 SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS 724
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
D G Y+L++ IYA GK D+ +R++M++K ++K G S
Sbjct: 725 PDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 765
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 201/472 (42%), Gaps = 47/472 (9%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
V L + +L SC + + + LL+ ++ + V+ L +S +V F
Sbjct: 59 VFLQNTLLHAYLSCGALSDARR----LLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELF 114
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+ D NT+M + +L + + N +T K C +
Sbjct: 115 GRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWH 174
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
++ A + K + D V +L+ M+ CG V A ++F + NSM+ GY
Sbjct: 175 SLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGY 234
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-EAANGLFDL------------- 279
VK V A ELFD MPERD+ +WN M+S G + EA + + D+
Sbjct: 235 VKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYT 294
Query: 280 -------------------------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+P D + +++ YAK G A+ F+ + R
Sbjct: 295 SSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDR 354
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
N V+W +L++ +++ + E + LF++M ++ +L ++++ C + + +G+ +H
Sbjct: 355 NNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLH 414
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S K V++S SL++MYAKC + A +F M EK++VSW SMI Y G
Sbjct: 415 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVA 474
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
KA E F M ++ N T+ +L A G +G + +M + P
Sbjct: 475 KAREFFDGMSEK----NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 522
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 173/386 (44%), Gaps = 57/386 (14%)
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK-VFEDGPVWDLVTWNSMIDGYVKNRE 238
H R+V G +F++N+L+H Y CG + DAR+ + D +++T N M++GY K
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF----RDVVSWNCMIDG 294
+ A ELF MP RD+ +WN+++SGY ++ L L F R SW
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGY-----FQSRQYLVSLETFLSMHRSGDSWP----- 156
Query: 295 YAKIGNVTSARNCFDRMCMR---NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
N F C + W+ L + L + + D
Sbjct: 157 -----------NAFTLACAMKSCGALGWHSLA---------LQLLAMVQKFDSQDDSEVA 196
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
A+L+ + C G +D+ + I+ +P + S+L Y K +D A +FD+
Sbjct: 197 AALVDMFVRC---GAVDLASRLFVRIK----EPTMFCRNSMLAGYVKTYGVDHALELFDS 249
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M E++VVSWN M+ G+ +AL+M ++M+ +G + T+ L+AC +
Sbjct: 250 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR-- 307
Query: 472 WWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS- 528
W L ++ + P ++ Y +V+L ++G ++++ + + L A W L+S
Sbjct: 308 -WGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISG 365
Query: 529 ----ACSTHSNSELGKIVAQHLMELE 550
C T S ++ A+ LM L+
Sbjct: 366 FLQYGCFTESVELFNQMRAE-LMTLD 390
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 298/545 (54%), Gaps = 20/545 (3%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+ + Q +H ++ G + + + +L + T S+ ++ FD ++ +
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS-MYTKCGSMEDALEVFDLVKGRN 377
Query: 121 AFMCNTIMKSFLM---LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
++ F +++ F ++ KM+ +E N TF + C+ +L+ G+
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAF----LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++ I++ G+ D VR +L+ MY+ CG + DA +VFE ++V WN+MI YV++
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF--------RDVVSWN 289
+ A F + + I +S + ++V + L + F D+ N
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++ + G++ SA+N F+ M R++VSWN ++A +V+ F M KP
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
++ + +L ACA+ + G+ +H+ I + DVL+ T L++MY KCG ++ A VF
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
+ +KNV SW SMI GY HG+G++ALE+F +M++ G P+ TF+ LSAC HAG++
Sbjct: 674 HKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIE 733
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG +F M+ + IEP++EHYGCMVDL GRAGL+ ++ E + K+ +E +WGALL A
Sbjct: 734 EGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H N EL + AQ +EL+P D G +V+LSNIYA+ G W EV +R++M ++ + K
Sbjct: 793 CQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKP 852
Query: 590 GSSLV 594
G S +
Sbjct: 853 GQSWI 857
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 154/605 (25%), Positives = 271/605 (44%), Gaps = 86/605 (14%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAAS 93
NE D+ + I ++ L L+ C K +I+ + SG+ D F +
Sbjct: 92 NEAMQVLERVDSSHIQIYRQTYSAL--LQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRN 149
Query: 94 RVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
++ +++S +F D ++E D + N ++ ++ A + E+M+ V
Sbjct: 150 TLINMYAKCGNTISAKQIF-DDMREKDVYSWNLLLGGYVQHGLYEEAFKLH-EQMVQDSV 207
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ + TF + CA R++ +G++++ I+K G++ DLFV +LI+M+ CG++ DA K
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER--------------------- 252
VF++ P DLVTW SMI G ++ A LF M E
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 253 ------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
+I+ +++S Y G ME A +FDL+ R+VVSW MI G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
+A+ G + E F++MI +PN +
Sbjct: 388 FAQHGRID-------------------------------EAFLFFNKMIESGIEPNRVTF 416
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
MS+L AC++ + GQ I +I + D + T+LL+MYAKCG + A VF+ +++
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK 476
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA-GMVLEGWW 473
+NVV+WN+MI Y H Q + AL F + K G PN +TF +L+ C + + L W
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+F +M+ +E + +V + G + ++ L + +P + W +++ H
Sbjct: 537 HFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQH 593
Query: 534 SNSELGKIVAQHLME--LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK--ELEKAV 589
+++ + + E ++P D + L N AS E L ++ E + + V
Sbjct: 594 GKNQVAFDYFKMMQESGIKP-DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLV 652
Query: 590 GSSLV 594
G+ L+
Sbjct: 653 GTGLI 657
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 249/492 (50%), Gaps = 29/492 (5%)
Query: 64 LESCS---TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+ V + +++ +L +G D F + ++ + + + FD + D
Sbjct: 218 LNACADARNVDKGRELYNLILKAGWDTDLFVGTALIN-MHIKCGDIGDATKVFDNLPTRD 276
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ T M + L + F +++M + V+ + F L + C +L +GKKVH
Sbjct: 277 -LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
AR+ + G++ +++V +++ MY+ CG + DA +VF+ ++V+W +MI G+ ++ +
Sbjct: 336 ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRID 395
Query: 241 FARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMI 292
A F+ M E I T+ S++ ++ + D + D ++
Sbjct: 396 EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALL 455
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YAK G++ A F+++ +NVV+WN ++ YV+ + Y L F +++ KPN +
Sbjct: 456 SMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSS 515
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ S+L C + +++G+W+H I K ++ D+ +S +L++M+ CG + A+N+F++M
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++++VSWN++I G+ HG+ + A + F M++ G P+ TF +L+AC + EG
Sbjct: 576 PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG- 634
Query: 473 WYFDLMQRIYKIEPKVEHYGC-------MVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
+R++ + + + C ++ + + G + D+ ++ KLP + W +
Sbjct: 635 ------RRLHALITEAA-FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTS 686
Query: 526 LLSACSTHSNSE 537
+++ + H +
Sbjct: 687 MIAGYAQHGRGK 698
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 126/255 (49%), Gaps = 7/255 (2%)
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
+++ N +L + + E +++ +R+ + + ++L C + G+
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
I+++I+K ++PD+ + +L+ MYAKCG A+ +FD+M EK+V SWN ++ GY HG
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY- 491
E+A ++ +M + P+ TF+ +L+AC A V +G ++L I K + +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNL---ILKAGWDTDLFV 248
Query: 492 -GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
++++ + G + D+ ++ LP W ++++ + H + + Q ME E
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGRFKQACNLFQR-MEEE 306
Query: 551 PRDPGPYVLLSNIYA 565
P +S + A
Sbjct: 307 GVQPDKVAFVSLLRA 321
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 227/351 (64%), Gaps = 3/351 (0%)
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
+F F P D+F ++++ Y G++ A LFD + R++VSW MI GY + + A
Sbjct: 104 IFGFEP--DLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRA 161
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACAN 363
FD M R+V+SWN ++A+Y + E + +F RM++ G+ N +L +VL ACA+
Sbjct: 162 LRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 221
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
G +G+ IH + K ++ +V + TS++ MY KCG +++AR FD M EKNV SW++M
Sbjct: 222 SGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 281
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
+ GYGMHG ++ALE+F EM G PN TF+ VL+AC+HAG++ EGW +F M +
Sbjct: 282 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 341
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+EP VEHYGCMVDLLGRAG ++++ +L+ + + +WGALL AC H N +LG+I A
Sbjct: 342 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISA 401
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ L EL+P++ G YVLLSNIYA G+W++VE +R +MK L K G SLV
Sbjct: 402 RKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLV 452
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 183/399 (45%), Gaps = 51/399 (12%)
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+L+ LF + + + F N+++ D AL + M ++ N TFP K
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALR-AFSSMRKLSLKPNRSTFPCAIKS 85
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + L G++ H + + GFE DLFV ++L+ MYS CGE+ DAR +F++ ++V+W
Sbjct: 86 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 145
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
SMI GYV+N + A +FD M ERD+ +WNS+I+ Y G + +F M +
Sbjct: 146 TSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 205
Query: 287 SWNC----------------------------------------MIDGYAKIGNVTSARN 306
++N +ID Y K G V AR
Sbjct: 206 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 265
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
FDRM +NV SW+ ++A Y E L +F M KPN + +SVL AC++ G+
Sbjct: 266 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 325
Query: 367 IDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMI 424
++ G W + + ++P V ++ + + G + A ++ M + + V W +++
Sbjct: 326 LEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 385
Query: 425 MGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
MH GE + E++ P + + +LS
Sbjct: 386 GACRMHKNVDLGEISARKLFELD-----PKNCGYYVLLS 419
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 298/545 (54%), Gaps = 20/545 (3%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+ + Q +H ++ G + + + +L + T S+ ++ FD ++ +
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS-MYTKCGSMEDALEVFDLVKGRN 377
Query: 121 AFMCNTIMKSFLM---LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
++ F +++ F ++ KM+ +E N TF + C+ +L+ G+
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAF----LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++ I++ G+ D VR +L+ MY+ CG + DA +VFE ++V WN+MI YV++
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF--------RDVVSWN 289
+ A F + + I +S + ++V + L + F D+ N
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++ + G++ SA+N F+ M R++VSWN ++A +V+ F M KP
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
++ + +L ACA+ + G+ +H+ I + DVL+ T L++MY KCG ++ A VF
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
+ +KNV SW SMI GY HG+G++ALE+F +M++ G P+ TF+ LSAC HAG++
Sbjct: 674 HKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIE 733
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG +F M+ + IEP++EHYGCMVDL GRAGL+ ++ E + K+ +E +WGALL A
Sbjct: 734 EGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H N EL + AQ +EL+P D G +V+LSNIYA+ G W EV +R++M ++ + K
Sbjct: 793 CQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKP 852
Query: 590 GSSLV 594
G S +
Sbjct: 853 GQSWI 857
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 154/605 (25%), Positives = 271/605 (44%), Gaps = 86/605 (14%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAAS 93
NE D+ + I ++ L L+ C K +I+ + SG+ D F +
Sbjct: 92 NEAMQVLERVDSSHIQIYRQTYSAL--LQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWN 149
Query: 94 RVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
++ +++S +F D ++E D + N ++ ++ A + E+M+ V
Sbjct: 150 TLINMYAKCGNTISAKQIF-DDMREKDVYSWNLLLGGYVQHGLYEEAFKLH-EQMVQDSV 207
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ + TF + CA R++ +G++++ I+K G++ DLFV +LI+M+ CG++ DA K
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER--------------------- 252
VF++ P DLVTW SMI G ++ A LF M E
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 253 ------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
+I+ +++S Y G ME A +FDL+ R+VVSW MI G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
+A+ G + E F++MI +PN +
Sbjct: 388 FAQHGRID-------------------------------EAFLFFNKMIESGIEPNRVTF 416
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
MS+L AC++ + GQ I +I + D + T+LL+MYAKCG + A VF+ +++
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK 476
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA-GMVLEGWW 473
+NVV+WN+MI Y H Q + AL F + K G PN +TF +L+ C + + L W
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+F +M+ +E + +V + G + ++ L + +P + W +++ H
Sbjct: 537 HFLIMKA--GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQH 593
Query: 534 SNSELGKIVAQHLME--LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK--ELEKAV 589
+++ + + E ++P D + L N AS E L ++ E + + V
Sbjct: 594 GKNQVAFDYFKMMQESGIKP-DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLV 652
Query: 590 GSSLV 594
G+ L+
Sbjct: 653 GTGLI 657
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 249/492 (50%), Gaps = 29/492 (5%)
Query: 64 LESCS---TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+ V + +++ +L +G D F + ++ + + + FD + D
Sbjct: 218 LNACADARNVDKGRELYNLILKAGWDTDLFVGTALIN-MHIKCGDIGDATKVFDNLPTRD 276
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ T M + L + F +++M + V+ + F L + C +L +GKKVH
Sbjct: 277 -LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
AR+ + G++ +++V +++ MY+ CG + DA +VF+ ++V+W +MI G+ ++ +
Sbjct: 336 ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRID 395
Query: 241 FARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMI 292
A F+ M E I T+ S++ ++ + D + D ++
Sbjct: 396 EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALL 455
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YAK G++ A F+++ +NVV+WN ++ YV+ + Y L F +++ KPN +
Sbjct: 456 SMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSS 515
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ S+L C + +++G+W+H I K ++ D+ +S +L++M+ CG + A+N+F++M
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM 575
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++++VSWN++I G+ HG+ + A + F M++ G P+ TF +L+AC + EG
Sbjct: 576 PKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG- 634
Query: 473 WYFDLMQRIYKIEPKVEHYGC-------MVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
+R++ + + + C ++ + + G + D+ ++ KLP + W +
Sbjct: 635 ------RRLHALITEAA-FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTS 686
Query: 526 LLSACSTHSNSE 537
+++ + H +
Sbjct: 687 MITGYAQHGRGK 698
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 126/255 (49%), Gaps = 7/255 (2%)
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
+++ N +L + + E +++ +R+ + + ++L C + G+
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
I+++I+K ++PD+ + +L+ MYAKCG A+ +FD+M EK+V SWN ++ GY HG
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY- 491
E+A ++ +M + P+ TF+ +L+AC A V +G ++L I K + +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNL---ILKAGWDTDLFV 248
Query: 492 -GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
++++ + G + D+ ++ LP W ++++ + H + + Q ME E
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGRFKQACNLFQR-MEEE 306
Query: 551 PRDPGPYVLLSNIYA 565
P +S + A
Sbjct: 307 GVQPDKVAFVSLLRA 321
>gi|30017569|gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539031|gb|AAR87288.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711017|gb|ABF98812.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 676
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 315/636 (49%), Gaps = 66/636 (10%)
Query: 36 ANEPKPKFTDTDNQRLPIVDLSHPILQKLESCST-VKEFHQIHTQLLVSGLSQDSFAASR 94
A +P + T + RL HP L LE C + F I +L L+ ++F SR
Sbjct: 5 AGAGRPPWDPTVSLRL-----GHPALVLLERCGGGARPFKAILAHMLRLRLAFETFPMSR 59
Query: 95 VLKKLCTSL--SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF-----YYEK 147
+L S + + LF P+ ++ N ++ S + Y
Sbjct: 60 LLHFATVSFPHHARAAETLFEHFTPRPNLYIYNLMLSSAAAAAAAASSSPSRRPAALYMS 119
Query: 148 MMAKFVEHNHYTF-PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
M+A + + TF LL V A RS+ GK+VHA +V G +++RNSLI MY G
Sbjct: 120 MLASSIHPDEQTFLSLLKSVDAERRSV--GKQVHAHVVVTGLHSRVYLRNSLIKMYLDAG 177
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI------------ 254
+V A +F P D V+ N M+ GYVK G A F M R I
Sbjct: 178 DVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRGIGVDQYTAVALLA 237
Query: 255 -----------------------------FTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
N+++ Y G+M A +FD RD
Sbjct: 238 CCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAGERDG 297
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
+SWN M+ G+A G + A F R+++SWN LLA Y R +++ + LF M+
Sbjct: 298 ISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLAS 357
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
P++ + +++++A A G ++ + +H ++ K D L+++L+ MY KCG + LA
Sbjct: 358 SVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGSIKLA 417
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
VF+ +K+V W +MI G HG G+ AL++F +M+ G PN T + VLSAC+HA
Sbjct: 418 YAVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHA 477
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+ EG FD +++ + IEP VEH+GCMVDLL R+G + D+ +L ++PM+ ++WG+
Sbjct: 478 GLFDEGCKIFDTLKQRFNIEPGVEHFGCMVDLLARSGRLSDAVDLARRMPMKPSRSIWGS 537
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
+LSA S N+E+ +I ++ L+ LEP + G YVLLSN+YA+EG+W+ +R M+ K +
Sbjct: 538 ILSASSACQNTEVAEIASKELLCLEPAEEGGYVLLSNMYAAEGQWNYSNEVRENMERKGV 597
Query: 586 EKAVGSSLVHPGEFASESIVENC------PPHRKCI 615
K S+ ++ S+V N P H KCI
Sbjct: 598 RK---SADTETAKYKELSMVTNFPYFSSPPEHIKCI 630
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 268/472 (56%), Gaps = 11/472 (2%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA ++L + +K+HA + F D F+ NSLIHMY C VLDAR VF+ D+V+
Sbjct: 60 ACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVS 119
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMI---SGYVDVGDMEAANGLFD 278
W S+I GY +N +G + + + FT+ S++ Y D G + L
Sbjct: 120 WTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAV 179
Query: 279 LMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
+ DV + ++D YA+ G + A FD++ +N VSWN L++ + R D L
Sbjct: 180 KCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALM 239
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
F M+R + + SV ++ A +G ++ G+W+H+++ K R K + +LL MYA
Sbjct: 240 TFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYA 299
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
K G M AR VFD + K++V+WNSM+ + +G G++A+ F EM K G N TF+C
Sbjct: 300 KSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLC 359
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+L+AC+H G+V EG YF++M+ Y +EP+++HY +V LLGRAGL+ + + K+PME
Sbjct: 360 ILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPME 418
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A+WGALL+AC H N+++G+ A H+ EL+P D GP VLL NIYAS G+WD +R
Sbjct: 419 PTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVR 478
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC-IVYSMLGEIGAQMK 628
+MK ++K S V E + V N H + +Y M GEI +++
Sbjct: 479 MMMKTTGVKKEPACSWVEM-ENSVHMFVANDDTHPQAEEIYKMWGEISKKIR 529
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 189/394 (47%), Gaps = 14/394 (3%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
+++ +IH L S + D+F + ++ C S + +F D ++ D +++
Sbjct: 66 NLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVF-DQMRRKDMVSWTSLI 124
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
+ + P A+ + +F + N +TF L K G+++HA VKCG+
Sbjct: 125 AGYAQNDMPVEAIGLLPGMLKGRF-KPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGW 183
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
D++V ++L+ MY+ CG++ A VF+ + V+WN++I G+ + + A F
Sbjct: 184 HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAE 243
Query: 249 MP----ERDIFTWNSMISGYVDVGDMEAANGLF-DLMPFRDVVS---WNCMIDGYAKIGN 300
M E FT++S+ S +G +E + ++ R ++ N ++D YAK G+
Sbjct: 244 MLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGS 303
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ AR FDR+ +++V+WN +L + + E + F+ M + N+ + + +LTA
Sbjct: 304 MIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTA 363
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR-NVFDNMTEKNVVS 419
C++ G++ G+ +++ ++P++ +++ + + G+++ A +F E
Sbjct: 364 CSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAV 423
Query: 420 WNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
W +++ MH G+ A + E++ P
Sbjct: 424 WGALLAACRMHKNAKVGQFAADHVFELDPDDSGP 457
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 123/302 (40%), Gaps = 48/302 (15%)
Query: 323 LALYVRCKDYCEC-----------LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
L LY R + Y LR D + G+ P S +TACA ++ +
Sbjct: 12 LLLYRRTRPYTSTAANPVAAASAVLRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDAR 71
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
IH+++ R D L SL+ MY KC + ARNVFD M K++VSW S+I GY +
Sbjct: 72 KIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQND 131
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSAC-----------THAGMVLEGWWYFDLMQR 480
+A+ + M K PN TF +L A HA V GW
Sbjct: 132 MPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGW-------- 183
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
V ++D+ R G M + + KL + G + W AL+S + + E
Sbjct: 184 ----HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WNALISGFARKGDGESAL 238
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYAS--------EGKWDEVENLRRIMKEKELEKAVGSS 592
+ + L + S++++S +GKW ++ ++L VG++
Sbjct: 239 MTFAEM--LRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIK---SRQKLTAFVGNT 293
Query: 593 LV 594
L+
Sbjct: 294 LL 295
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 253/413 (61%), Gaps = 3/413 (0%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++ NS++ G + +A +FE P D+V+W +M+DG KN +V AR LFD
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+I +WN+MI+GY ++ A+ LF +MP RD SWN MI G+ + + A F
Sbjct: 228 MPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF 287
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVI 367
DRM +NV+SW ++ YV K+ E L +F +M+R G KPN + +S+L+AC+++ +
Sbjct: 288 DRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIM 425
GQ IH I K + + +++++LL MY+K G + AR +FDN + +++++SWNSMI
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
Y HG G++A+EM+ +M K G P+ T++ +L AC+HAG+V +G +F + R +
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
+ EHY C+VDL GRAG ++D ++ + +GA+LSAC+ H+ + K V +
Sbjct: 468 LREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKK 527
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
++E D G YVL+SNIYA+ GK +E +R MKEK L+K G S V G+
Sbjct: 528 VLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGK 580
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 189/360 (52%), Gaps = 28/360 (7%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFED-GP 219
L+G++C + GK AR + G E D+ +I Y G++ +AR++F+
Sbjct: 52 LIGELC------KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS 105
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
++VTW +M+ GY++++++ A LF MPER++ +WN+MI GY G ++ A LFD
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
MP R++VSWN M+ + G + A N F+RM R+VVSW ++ + E RLF
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST--SLLTMYA 397
D M + N S +++T A ID Q ++ P+ ++ +++T +
Sbjct: 226 DCM----PERNIISWNAMITGYAQNNRIDEAD------QLFQVMPERDFASWNTMITGFI 275
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFI 456
+ M+ A +FD M EKNV+SW +MI GY + + E+AL +F +M + G PN T++
Sbjct: 276 RNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+LSAC+ ++EG Q+I+++ K H + + S EL++ M
Sbjct: 336 SILSACSDLAGLVEG-------QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E + T++ ++ + AL+ + + + V+ N T+ + C+ +
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV--WDLVTWNSM 229
L EG+++H I K + + V ++L++MYS GE++ ARK+F++G V DL++WNSM
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 230 IDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLF-DL----- 279
I Y + A E+++ M + T+ +++ G +E F DL
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 280 MPFRDVVSWNCMID--GYA-KIGNVTSARNCFDRMCMRN 315
+P R+ + C++D G A ++ +VT+ NC D R+
Sbjct: 466 LPLRE-EHYTCLVDLCGRAGRLKDVTNFINCDDARLSRS 503
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
+P V L+ K G + AR +FD + E++VV+W +I GY G +A E+F
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR 102
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
++ R N T+ ++S + + F M E V + M+D ++G
Sbjct: 103 VDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMP-----ERNVVSWNTMIDGYAQSG 154
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI-VAQHLMELEP-RDPGPYVLL 560
+ + EL ++P E W +++ A + G+I A +L E P RD + +
Sbjct: 155 RIDKALELFDEMP-ERNIVSWNSMVKAL-----VQRGRIDEAMNLFERMPRRDVVSWTAM 208
Query: 561 SNIYASEGKWDEVENLRRIMKEKEL 585
+ A GK DE L M E+ +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNI 233
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 242/393 (61%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G V +AR +F++ ++VTW +MI GY +N V AR+LF+ MPE+ +W SM+ GY
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G +E A F++MP + V++ N MI G+ ++G ++ AR FD M R+ +W ++
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y R E L LF +M + +P+ SL+S+L+ CA + + G+ +H+++ +C+ D
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
V +++ L+TMY KCG + A+ VFD + K+++ WNS+I GY HG GE+AL++F EM
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G PN T I +L+AC++AG + EG F+ M+ + + P VEHY C VD+LGRAG +
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVD 485
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+ EL+ + ++ +WGALL AC THS +L ++ A+ L E EP + G YVLLS+I A
Sbjct: 486 KAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
S KW +V +R+ M+ + K G S + G+
Sbjct: 546 SRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGK 578
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 31/374 (8%)
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
V C FE+ R G++ +ARK F+ + +WNS++ GY N AR
Sbjct: 18 VNCSFEISRLSR---------IGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEAR 68
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+LFD M ER++ +WN ++SGY+ + A +F+LMP R+VVSW M+ GY + G V
Sbjct: 69 QLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGE 128
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A + F RM RN VSW ++ + + +L+D M D + +++
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----VASTNMIGGLCR 184
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
G +D + I ++ + +V+ T+++T Y + +D+AR +F+ M EK VSW SM
Sbjct: 185 EGRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSM 240
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
++GY + G+ E A E F M + +A + G + + FDLM+
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV----GFGEVGEISKARRVFDLME---- 292
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME----AGPALWGALLSACSTHSNSELG 539
+ + M+ R G ++ +L +++ + + P+L ++LS C+T ++ + G
Sbjct: 293 -DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLI-SILSVCATLASLQYG 350
Query: 540 KIVAQHLMELEPRD 553
+ V HL+ + D
Sbjct: 351 RQVHAHLVRCQFDD 364
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ +S + FD +++ D ++K++ AL + + M + V + +
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ-MQKQGVRPSFPSLIS 336
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ VCA + SL+ G++VHA +V+C F+ D++V + L+ MY CGE++ A+ VF+ D
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLFD 278
++ WNS+I GY + A ++F MP T ++++ G +E +F+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 279 LMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
M + V+ ++C +D + G V A + M ++ + W LL
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
>gi|414589212|tpg|DAA39783.1| TPA: hypothetical protein ZEAMMB73_012385 [Zea mays]
Length = 590
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 273/507 (53%), Gaps = 77/507 (15%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDAR 212
N +TF L + C +R L + VH +IV+CGF D+ V+N+L+++Y C G+V AR
Sbjct: 114 NGFTFTFLLRACESLRRLFLCRCVHGQIVRCGFGSDVVVQNALLNVYYKCSDPGDVGIAR 173
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEA 272
+VF++ D+V+WNS++ Y+ N + A ELF+ MPER++ +WN++++ + GDM +
Sbjct: 174 QVFDEMANRDVVSWNSIVGVYMSNGDAAGAMELFEAMPERNVVSWNTIVAAFTRAGDMVS 233
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A +FD MP RD +SWN MI GYA GNV SA + FD M ++VVSW +++ Y + +
Sbjct: 234 ARAVFDRMPIRDAISWNLMISGYATSGNVESAWSLFDIMDRKDVVSWTAMVSAYAKIGEL 293
Query: 333 CECLRLFDRM--------------------------------IRGDAKPNEASLMSVLTA 360
LFD+M + G P+EA+L+SV++A
Sbjct: 294 DSARVLFDQMPDKNLVSWNAMITGYNHNLRYDDALCTFQQMMLEGRFMPDEATLVSVVSA 353
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
CA +G ++ WI SYI K V L +L+ M+AKCG + A VF+ M + ++W
Sbjct: 354 CAQLGSVEYCNWISSYISKSNTHITVALGNALVDMFAKCGDVGRAHLVFNKMKTRCTITW 413
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
+MI G+ +GQ +AL ++ +M + G T +D F+ L AC H G++ EGW F+ M
Sbjct: 414 TTMISGFAYNGQFREALLVYNDMCREGVTLDDTVFVAALGACAHGGLLQEGWSIFNQMVE 473
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
+I P++EHYGC+VDLLGRA EL +
Sbjct: 474 YCRIVPRMEHYGCIVDLLGRA-----------------------------------ELSE 498
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
V+ ++E+EP + VL+SN A EG+WD V + RR M++ +EK GSSL+ G
Sbjct: 499 YVSTKIVEMEPFNSSYQVLVSNCSALEGRWDSVMDARRTMRDCGVEKTPGSSLIQVGNEV 558
Query: 601 SESIVENCPPHRK------CIVYSMLG 621
E + ++ H+K CI++ + G
Sbjct: 559 HEFLAKD-TRHKKRKEKMNCILFKIDG 584
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC---GVMDLA 405
PN + +L AC ++ + + + +H I +C DV++ +LL +Y KC G + +A
Sbjct: 113 PNGFTFTFLLRACESLRRLFLCRCVHGQIVRCGFGSDVVVQNALLNVYYKCSDPGDVGIA 172
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
R VFD M ++VVSWNS++ Y +G A+E+F M P N ++ +++A T A
Sbjct: 173 RQVFDEMANRDVVSWNSIVGVYMSNGDAAGAMELFEAM----PERNVVSWNTIVAAFTRA 228
Query: 466 GMVLEGWWYFD-----------LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
G ++ FD LM Y VE + D++ D +++VS
Sbjct: 229 GDMVSARAVFDRMPIRDAISWNLMISGYATSGNVESAWSLFDIM-------DRKDVVSWT 281
Query: 515 PMEAGPALWGALLSA 529
M + A G L SA
Sbjct: 282 AMVSAYAKIGELDSA 296
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
AL + + M+ + T + CA + S+ + + I K + + + N+L+
Sbjct: 327 ALCTFQQMMLEGRFMPDEATLVSVVSACAQLGSVEYCNWISSYISKSNTHITVALGNALV 386
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
M++ CG+V A VF +TW +MI G+ N
Sbjct: 387 DMFAKCGDVGRAHLVFNKMKTRCTITWTTMISGFAYN 423
>gi|115474919|ref|NP_001061056.1| Os08g0162200 [Oryza sativa Japonica Group]
gi|28564637|dbj|BAC57819.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623025|dbj|BAF22970.1| Os08g0162200 [Oryza sativa Japonica Group]
gi|125602282|gb|EAZ41607.1| hypothetical protein OsJ_26139 [Oryza sativa Japonica Group]
gi|215741371|dbj|BAG97866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 535
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 257/414 (62%), Gaps = 3/414 (0%)
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
+ G L RNSL+ G++ AR +F+ PV D+V+WNSM+ G K + A E
Sbjct: 120 RAGAHSFLVSRNSLLASLLRSGDLAAARALFDRMPVRDVVSWNSMVAGLAKAGHLDAAIE 179
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
LFD MPER+ +WN+++ GY+ GD+ A LF+ MP R VSW MI GYA G+V +A
Sbjct: 180 LFDKMPERNAASWNAVMCGYIAQGDLAQARELFEQMPVRSNVSWITMISGYANSGDVHAA 239
Query: 305 RNCFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA--KPNEASLMSVLTAC 361
F+RM +++ +WN ++A Y + E L +F+RM++ PNE + SV++AC
Sbjct: 240 GELFERMENKKDLYAWNAMIACYAKNGCAREALAVFNRMLKPHVWVMPNEKTFSSVISAC 299
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+ +G + G W S++ I+ D L T+L+ ++ K G +D A ++F + ++VVS++
Sbjct: 300 SQLGDLRFGLWAESFMGSVGIELDDHLRTALVDLHTKSGRIDRAFDLFRGLGMRDVVSYS 359
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
++I+G GM+G+ +A+ +F EM +PN TF+ +LSA ++AG++ E F M
Sbjct: 360 AIIVGCGMNGKFNEAVSLFKEMSDAKISPNAVTFVGLLSAYSNAGLMEEARACFASMTEK 419
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
YKI P +EHY MVDLLGR+G + ++ +L+ ++PM+ ++WGALL AC H+N ELG+I
Sbjct: 420 YKISPSMEHYTIMVDLLGRSGKLDEAYQLIMQMPMKPDASIWGALLLACRLHNNVELGEI 479
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
VA ELEP + G Y+LL NIY+ KW++V+ LR+IM E+ L K GSS V
Sbjct: 480 VASKCFELEPGESGYYILLGNIYSEANKWEKVKRLRKIMAERGLNKMPGSSWVQ 533
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 152 FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA 211
+V N TF + C+ + LR G + + G ELD +R +L+ +++ G + A
Sbjct: 284 WVMPNEKTFSSVISACSQLGDLRFGLWAESFMGSVGIELDDHLRTALVDLHTKSGRIDRA 343
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDV 267
+F + D+V+++++I G N + A LF M + I T+ ++S Y +
Sbjct: 344 FDLFRGLGMRDVVSYSAIIVGCGMNGKFNEAVSLFKEMSDAKISPNAVTFVGLLSAYSNA 403
Query: 268 GDMEAANGLFDLMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVS-WNI 321
G ME A F M + +S + M+D + G + A +M M+ S W
Sbjct: 404 GLMEEARACFASMTEKYKISPSMEHYTIMVDLLGRSGKLDEAYQLIMQMPMKPDASIWGA 463
Query: 322 LL 323
LL
Sbjct: 464 LL 465
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 306/569 (53%), Gaps = 10/569 (1%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
TV QIH L+ L D+F + +LK+ S L F Q P+ F+ N+++
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKR-TLFFRQTKYSYLLFSHTQFPNIFLYNSLI 83
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
F+ + L + H +TFPL+ K C S + G +H+ +VKCGF
Sbjct: 84 NGFVNNHLFHETLDLFLSIRKHGLYLHG-FTFPLVLKACTRASSRKLGIDLHSLVVKCGF 142
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
D+ SL+ +YS G + DA K+F++ P +VTW ++ GY + A +LF
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 249 MPER----DIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMIDGYAKIGN 300
M E D + ++S V VGD+++ + M ++ +++ YAK G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ AR+ FD M +++V+W+ ++ Y E + LF +M++ + KP++ S++ L++
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
CA++G +D+G+W S I + ++ ++ +L+ MYAKCG M VF M EK++V
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N+ I G +G + + +F + EK G +P+ +TF+ +L C HAG++ +G +F+ +
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
+Y ++ VEHYGCMVDL GRAG++ D+ L+ +PM +WGALLS C +++L +
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
V + L+ LEP + G YV LSNIY+ G+WDE +R +M +K ++K G S +
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Query: 601 SESIVENCPPHRKCIVYSMLGEIGAQMKM 629
E + ++ +Y+ L ++G +M++
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
>gi|326517559|dbj|BAK03698.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 252/406 (62%), Gaps = 3/406 (0%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
L RNSL+ G++ AR +F+ PV D+V+WNSM+ G K + A ELFD MPE
Sbjct: 121 LVSRNSLLASLLRSGDLPAARALFDQMPVRDVVSWNSMVAGLAKAGRLDRAIELFDQMPE 180
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R+ +WN++I G + G + A +F+ MP R +SW MI GYAK G+V +A F+RM
Sbjct: 181 RNAASWNAVICGLIAHGHLTRAREMFEQMPVRSNISWITMISGYAKAGDVQAAAGLFERM 240
Query: 312 CMRN-VVSWNILLALYVRCKDYCECLRLFDRMIRGDA--KPNEASLMSVLTACANMGVID 368
+N + +WN ++A Y + E + +F+RM++ PNE + SV +AC+ +G +
Sbjct: 241 ENKNDLYAWNAMIACYAQNGCAREAIGVFNRMLKPHVCVLPNEKTFSSVTSACSQLGNLR 300
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G W+ S++ I+ D L T+L+ +Y K G +D A ++F +++++VVS+++MI+G G
Sbjct: 301 FGLWVQSFMVSLGIELDDHLRTALVDLYTKSGQIDRAFDLFKGLSKRDVVSYSAMIVGCG 360
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
M+G+ +A+ +F EM PN +F+ +LSA HAG+V E F M YKI P +
Sbjct: 361 MNGKLNEAIGLFNEMSDANILPNAVSFVGLLSAYNHAGLVEEARACFTSMSSKYKIRPSM 420
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHY MVDLLGR+G + ++ +L+ ++PM+ ++WGALL +C H+N ELG+++A E
Sbjct: 421 EHYTIMVDLLGRSGKLDEAFQLIMQMPMQPRASVWGALLLSCRLHNNVELGEVIASKCFE 480
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
P + G Y+LL NIYAS KWD+V LR+ MKE+ L K GSS V
Sbjct: 481 QAPGESGYYILLGNIYASANKWDKVRRLRKTMKERCLSKMPGSSWV 526
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 69/338 (20%)
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA +++ G + +L H+YS + + AR + ++ P + R
Sbjct: 73 HAHLLRLGLLAHPYPHAALAHLYS--RDPVAARSLLDETPP-------------ARGRA- 116
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
P + + NS+++ + GD+ AA LFD MP RDVVSWN M+ G AK G
Sbjct: 117 ----------PHSLLVSRNSLLASLLRSGDLPAARALFDQMPVRDVVSWNSMVAGLAKAG 166
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ A FD+M RN SWN ++ + +F++M P +++
Sbjct: 167 RLDRAIELFDQMPERNAASWNAVICGLIAHGHLTRAREMFEQM------PVRSNI----- 215
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN-VV 418
WI ++++ YAK G + A +F+ M KN +
Sbjct: 216 -----------SWI-----------------TMISGYAKAGDVQAAAGLFERMENKNDLY 247
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRG--PTPNDATFICVLSACTHAGMVLEGWWYFD 476
+WN+MI Y +G +A+ +F M K PN+ TF V SAC+ G + G W
Sbjct: 248 AWNAMIACYAQNGCAREAIGVFNRMLKPHVCVLPNEKTFSSVTSACSQLGNLRFGLWVQS 307
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
M + IE +VDL ++G + + +L L
Sbjct: 308 FMVSL-GIELDDHLRTALVDLYTKSGQIDRAFDLFKGL 344
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N TF + C+ + +LR G V + +V G ELD +R +L+ +Y+ G++ A +F
Sbjct: 282 NEKTFSSVTSACSQLGNLRFGLWVQSFMVSLGIELDDHLRTALVDLYTKSGQIDRAFDLF 341
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDME 271
+ D+V++++MI G N ++ A LF+ M + +I ++ ++S Y G +E
Sbjct: 342 KGLSKRDVVSYSAMIVGCGMNGKLNEAIGLFNEMSDANILPNAVSFVGLLSAYNHAGLVE 401
Query: 272 AANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS-WNILL 323
A F M + + + M+D + G + A +M M+ S W LL
Sbjct: 402 EARACFTSMSSKYKIRPSMEHYTIMVDLLGRSGKLDEAFQLIMQMPMQPRASVWGALL 459
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 283/540 (52%), Gaps = 53/540 (9%)
Query: 88 DSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEK 147
D F+ + L L S V +V FFD + E D N +++ F+ D A SF+
Sbjct: 173 DLFSWNSALAGLTQSGQMVR-AVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFF--- 228
Query: 148 MMAKFVEHNHYTF-PLLGKVCAGIRSLREGKKVHAR-----IVKCGFELDLFVRNSLIHM 201
+ N ++ LL C R + + + + R +V C LD +VR S +
Sbjct: 229 --GRIESPNVVSWVTLLNGYCRAGR-ISDARDLFDRMPERNVVACNVMLDGYVRLSRLE- 284
Query: 202 YSVCGEVLDARKVFEDGPVWDLVTWNSMIDG----------------------------- 232
+A K+F++ P + ++W ++I G
Sbjct: 285 --------EACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALM 336
Query: 233 --YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
Y++ V AR++FD M D WN+MISGYV G +E A LF MP +D VSWN
Sbjct: 337 HGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNT 396
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MI GYA+ G + A F RM +N VSWN +++ +V+ + + F M RG + +
Sbjct: 397 MIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRAD 456
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
++ S L ACAN+ + +G+ +HS + + D+ +L++ YAKCG M A+ +FD
Sbjct: 457 WSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFD 516
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M K++VSWN+++ GY +GQG +A+ +F EME G P++ TF+ +LSAC+ AG++ E
Sbjct: 517 EMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDE 576
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G +F+ M Y ++P EHY CM DLLGRAG + ++ ELV + ++ +WGALL AC
Sbjct: 577 GLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGAC 636
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+ N EL ++ A+ L ELEP YVLLSNI A GKWDE E R +KEK K G
Sbjct: 637 QMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPG 696
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 160/312 (51%), Gaps = 35/312 (11%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I Y+ G DA K+ + P DL +WNS + G ++ ++ A + FD M E+D+
Sbjct: 147 NAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMV 206
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN M+ G+V GD++AA F + +VVSW +++GY + G ++ AR+ FDRM RN
Sbjct: 207 SWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERN 266
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ---- 371
VV+ N++L YVR E +LFD M N S ++++ A G + +
Sbjct: 267 VVACNVMLDGYVRLSRLEEACKLFDEM----PGKNSISWTTIISGLARAGKLQEAKDLLD 322
Query: 372 ------------WIHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARNV 408
+H Y+Q+ + D + ++++ Y + G+++ A +
Sbjct: 323 KMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLL 382
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F M K+ VSWN+MI GY GQ KA+ +F M ++ N ++ V+S G+
Sbjct: 383 FQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRK----NTVSWNSVISGFVQNGLF 438
Query: 469 LEGWWYFDLMQR 480
++ + +F LM+R
Sbjct: 439 VDAFHHFMLMRR 450
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 144/319 (45%), Gaps = 44/319 (13%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+F N + + G++ AR++F+ P + VT+NSM+ ++ + AR LFD MP
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R+ +WN+MI+ D G + A GLFD MP RD SW M+ YA+ G + AR+ DRM
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRM 137
Query: 312 -------CMRNVV-------------------------SWNILLALYVRCKDYCECLRLF 339
C ++ SWN LA + ++ F
Sbjct: 138 PGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFF 197
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
D M+ D S +L G +D I+ P+V+ +LL Y +
Sbjct: 198 DEMVEKDM----VSWNLMLEGFVRAGDLDAAASFFGRIE----SPNVVSWVTLLNGYCRA 249
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + AR++FD M E+NVV+ N M+ GY + E+A ++F EM P N ++ ++
Sbjct: 250 GRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEM----PGKNSISWTTII 305
Query: 460 SACTHAGMVLEGWWYFDLM 478
S AG + E D M
Sbjct: 306 SGLARAGKLQEAKDLLDKM 324
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
V S LT A+ G + AR +FD+M +N V++NSM+ HG+ ++A +F M
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGM-- 75
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG--CMVDLLGRAGL 503
P+ N ++ +++A + G V + FD M P + + MV RAG
Sbjct: 76 --PSRNAVSWNAMIAALSDHGRVADARGLFDRM-------PSRDDFSWTVMVSCYARAGE 126
Query: 504 MRDSEELVSKLPMEAGPALWGALLSA 529
+ + +++ ++P + A + A++S
Sbjct: 127 LELARDVLDRMPGDKCTACYNAMISG 152
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 222/340 (65%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D +S++ Y G + A +FD M RDVV+WN MI GY K G+ AR FD M
Sbjct: 112 DAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMP 171
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RNVVSW ++ Y + K + + +F RM + + +L+SVL AC ++G +D+G+W
Sbjct: 172 ERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEW 231
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H ++ + + ++ L S++ MY KCG ++ A VF+ M EK+VV+W ++I G+ +HG
Sbjct: 232 VHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGL 291
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G +A+EMF ME+ PN TF+ +LSAC+H G+ G WYF++M Y+I+P+VEHYG
Sbjct: 292 GLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYG 351
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVDLLGRAG ++++++LV +P++A A+WGALL+A TH ++ LG+ HL+ELEP
Sbjct: 352 CMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEPN 411
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+ G Y+LLSNI+A + +W +V LR+ M+E+ L G+S
Sbjct: 412 NSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGAS 451
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 49/314 (15%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D V +SL+ +Y CG V DAR VF++ V D+V WN MI GYVK + ARELFD MP
Sbjct: 112 DAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMP 171
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----------------------DVVSW 288
ER++ +W ++I GY + E A +F M D+ W
Sbjct: 172 ERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEW 231
Query: 289 -----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
N +ID Y K G + A F+ M ++VV+W L+A +
Sbjct: 232 VHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGL 291
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPDVLLST 390
+ + +F RM R + PN + +++L+AC+++G+ D+G+W + + + RIKP V
Sbjct: 292 GLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYG 351
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKR 446
++ + + G + A+++ NM K N W +++ HG GE+AL +E+E
Sbjct: 352 CMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELE-- 409
Query: 447 GPTPNDATFICVLS 460
PN++ +LS
Sbjct: 410 ---PNNSGNYILLS 420
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E + T++ + + P A+ + +M + +E + + C +
Sbjct: 166 LFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVF-RRMQVEGIEADGVALLSVLAACGDLG 224
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++ G+ VH +V+ G ++ + NS+I MY CG + A +VFE +VTW ++I
Sbjct: 225 AVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIA 284
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM--PFR-- 283
G+ + A E+F M ++ T+ +++S VG + F++M +R
Sbjct: 285 GFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIK 344
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + CM+D + G + A++ M ++ N W LLA
Sbjct: 345 PRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLA 387
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG---------- 431
+ D +S+SL+ +Y CG + AR+VFD M ++VV+WN MI GY G
Sbjct: 109 VASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFD 168
Query: 432 ---------------------QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+ EKA+E+F M+ G + + VL+AC G V
Sbjct: 169 AMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDL 228
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G W + R + ++ ++D+ + G + + E+ + E W L++
Sbjct: 229 GEWVHRFVVR-RGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGME-EKSVVTWTTLIAGF 286
Query: 531 STHS 534
+ H
Sbjct: 287 ALHG 290
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 241/407 (59%), Gaps = 1/407 (0%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D F N ++ Y A+ F+ P D +WN+MI GY + E+ ARELF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
M E++ +WN+MISGY++ GD+E A+ F + P R VV+W MI GY K V A F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 309 DRMCM-RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
M + +N+V+WN +++ YV + L+LF M+ +PN + L S L C+ + +
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+G+ IH + K + DV TSL++MY KCG + A +F+ M +K+VV+WN+MI GY
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG +KAL +F EM P+ TF+ VL AC HAG+V G YF+ M R YK+EP+
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+HY CMVDLLGRAG + ++ +L+ +P A++G LL AC H N EL + A+ L+
Sbjct: 421 PDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 480
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+L ++ YV L+NIYAS+ +W++V +R+ MKE + K G S +
Sbjct: 481 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 28/321 (8%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV-DVGDMEAANGLFDLMPFRDV 285
N +I V++ ++ A +F M ++ TWNS++ G D M A+ LFD +P D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
S+N M+ Y + N A++ FDRM ++ SWN ++ Y R + + LF M+
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM-- 182
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCGVMD 403
+ NE S ++++ G D+ + H + ++ P V+ T+++T Y K ++
Sbjct: 183 --EKNEVSWNAMISGYIECG--DLEKASHFF----KVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 404 LARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
LA +F +MT KN+V+WN+MI GY + + E L++F M + G PN + L C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPK------VEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+ + L ++I++I K V ++ + + G + D+ +L +
Sbjct: 295 SELSAL-------QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 517 EAGPALWGALLSACSTHSNSE 537
+ A W A++S + H N++
Sbjct: 348 KDVVA-WNAMISGYAQHGNAD 367
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 81/342 (23%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + DA NT++ + + A +Y M E N ++
Sbjct: 146 FFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM-----EKNEVSW----------- 189
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
N++I Y CG++ A F+ PV +V W +MI
Sbjct: 190 ------------------------NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMIT 225
Query: 232 GYVKNREVGFARELF-DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM---------- 280
GY+K ++V A +F D +++ TWN+MISGYV+ E LF M
Sbjct: 226 GYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 281 -----------------------------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
DV + +I Y K G + A F+ M
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
++VV+WN +++ Y + + + L LF MI +P+ + ++VL AC + G+++IG
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ S ++ +++P T ++ + + G ++ A + +M
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
LLG C+ + +L+ G+++H + K D+ SLI MY CGE+ DA K+FE
Sbjct: 291 LLG--CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 222 DLVTWNSMIDGYVK----NREVGFARELFDFMPERDIFTWNSMI-----SGYVDVG--DM 270
D+V WN+MI GY + ++ + RE+ D D T+ +++ +G V++G
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
E+ + + P D + CM+D + G + A M R
Sbjct: 409 ESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGE 434
Y+ K + + ++ + G +D A VF M KN ++WNS+++G +
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+A ++F E+ P P+ ++ +LS + +FD M +K + M
Sbjct: 111 EAHQLFDEI----PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP--FK---DAASWNTM 161
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ R G M + EL + ME W A++S
Sbjct: 162 ITGYARRGEMEKARELFYSM-MEKNEVSWNAMISG 195
>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 662
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 182/504 (36%), Positives = 282/504 (55%), Gaps = 22/504 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+ + E ++ N ++ FL D A+ F+ + E + + L
Sbjct: 165 LFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFF-----KRMPERDVTSLSALVSGLIQNS 219
Query: 172 SLREGKKVHARIVKCGFELDLFVR--NSLIHMYSVCGEVLDARKVFEDGPVWD------- 222
L + +++ G + V N+LI Y G V +A+ +F+ P ++
Sbjct: 220 ELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRT 279
Query: 223 ------LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL 276
+V+WN+MI YVK +V AR+LFD MP+RD F+WN+MISGYV V DME A+ L
Sbjct: 280 GRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNL 339
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
F MP D +SWN MI GYA+ G++ A + F+RM +N+VSWN ++A Y + DY +
Sbjct: 340 FHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAI 399
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF +M K + +L S+L+ + + + +G IH + K I PDV L+ +L+TMY
Sbjct: 400 NLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKTVI-PDVPLNNALITMY 458
Query: 397 AKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
++CG + AR +F M +K V+SWN+MI GY HG +ALE+F M P TF
Sbjct: 459 SRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITF 518
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
I VL+AC HAG+V EG F+ M Y +EP+VEH+ +VD++GR G + ++ +L++ +
Sbjct: 519 ISVLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMT 578
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+E A+WGALL A H+N E+ ++ A+ LM+LEP PY+LL N+Y G+WD
Sbjct: 579 IEPDKAVWGALLGASRVHNNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAAE 638
Query: 576 LRRIMKEKELEKAVGSSLVHPGEF 599
+R +M+ ++K S V ++
Sbjct: 639 IRSMMERNNIKKEAAISWVDSSQW 662
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 168/345 (48%), Gaps = 31/345 (8%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+L+ N I ++ G + +AR +F+ + VTWNSMI GYVK E+ AR+LFD MP
Sbjct: 46 NLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMP 105
Query: 251 ERDIFTWNSMISGYVDVGD---MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
ERD+ +WN +ISGYV +E LFD MP R VSWN MI GYAK G + A
Sbjct: 106 ERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGL 165
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+ M +N VSWN +++ +++ D + F RM D SL ++++ +
Sbjct: 166 FNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDV----TSLSALVSGLIQNSEL 221
Query: 368 DIGQWI-HSYIQKCRIKPDVLLS-TSLLTMYAKCGVMDLARNVFDNMT------------ 413
D + I Y K ++ + +L+ Y + G +D A+N+FD +
Sbjct: 222 DQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGR 281
Query: 414 -EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
E+NVVSWN+MIM Y G A ++F +M P + ++ ++S H + E
Sbjct: 282 FERNVVSWNTMIMCYVKAGDVISARKLFDQM----PDRDSFSWNTMISGYVHVLDMEEAS 337
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
F M P + M+ ++G + + + ++P +
Sbjct: 338 NLFHKMP-----SPDTLSWNLMISGYAQSGSLELAHDFFERMPQK 377
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 130/287 (45%), Gaps = 49/287 (17%)
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
VK+R + + ++++ N IS + G + A LFD + R+ V+WN MI
Sbjct: 27 VKSRSFAMPPRAKTSVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMIS 86
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC--KDYCECLR-LFDRMIRGDAKPN 350
GY K G +T AR FD M R+VVSWN++++ YV C K + E R LFD+M P
Sbjct: 87 GYVKRGEMTKARKLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKM------P- 139
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
++C + + ++S YAK G MD A +F+
Sbjct: 140 ---------------------------ERCCVSWNTMISG-----YAKNGRMDEALGLFN 167
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL--SACTHAGMV 468
M EKN VSWN+M+ G+ +G +A+E F M +R T A ++ S A +
Sbjct: 168 TMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQAERI 227
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
L D E V Y ++ G+ G + +++ L K+P
Sbjct: 228 L-----LDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIP 269
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 248/391 (63%), Gaps = 6/391 (1%)
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
F + FDF D++ +++ Y +G + A +FD M RD+ +WN +I GY++ G+
Sbjct: 36 FIKSGFDF----DVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGYSRSGD 91
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG-DAKPNEASLMSVLT 359
+ A F M R+VVSW +++ Y + Y + L +F +M + + +PNE ++ SV +
Sbjct: 92 MEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFS 151
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVV 418
ACA +G +++G+ I SY + + ++ +S +LL MYA+CG +D AR+VF+ + ++ N+
Sbjct: 152 ACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLC 211
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SWNSM+MG +HG+ +AL+++ +M G P+D TF+ ++ ACTH G+V +GW F M
Sbjct: 212 SWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSM 271
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ + I PK+EHYGCMVDLLGRAG ++++ +LV +PM+ +WG LL ACS HSN E
Sbjct: 272 ETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEF 331
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
+I A+ L ++EP +PG YV+L NIYAS +WD V LR++MK ++ KA G S++
Sbjct: 332 AEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRKLMKGGQITKAAGYSVIEGEG 391
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+ IVE+ R +Y++L EI +MK+
Sbjct: 392 EIHKFIVEDKSHPRHYEIYALLNEISTKMKL 422
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 161/348 (46%), Gaps = 48/348 (13%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M+ K N TF L CA SL GK +H +K GF+ D++ +L+ MY+ G
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
++ AR+VF++ V D+ TWNS+I GY ++ ++ A ELF MP R + +W +MISGY
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 268 GDMEAANGLFDLMP----------------------------------------FRDVVS 287
G A +F M +++
Sbjct: 121 GMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYV 180
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMC-MRNVVSWN-ILLALYVRCKDYCECLRLFDRMIRG 345
N +++ YA+ G + +AR+ F+ + RN+ SWN +++ L V + E L+L+D+M+
Sbjct: 181 SNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRS-NEALQLYDQMLGE 239
Query: 346 DAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+P++ + + ++ AC + G++ G Q S I P + ++ + + G +
Sbjct: 240 GIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQE 299
Query: 405 ARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGP 448
A ++ +M K + V W +++ H E A E ++E P
Sbjct: 300 AYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNP 347
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 116/291 (39%), Gaps = 43/291 (14%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IHT + SG D +A + L + L + L+ FD + D N+++ +
Sbjct: 32 IHTHFIKSGFDFDVYALT-ALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGYSRSG 90
Query: 136 DPFGALSFY-----------------------YEKMMAKF--------VEHNHYTFPLLG 164
D GAL + Y K + F V N T +
Sbjct: 91 DMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIASVF 150
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF-EDGPVWDL 223
CA + +L G+++ + G +L+V N+L+ MY+ CG++ AR VF E G +L
Sbjct: 151 SACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNL 210
Query: 224 VTWNSMIDGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDL 279
+WNSM+ G + A +L+D M E D T+ +I G + LF
Sbjct: 211 CSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQS 270
Query: 280 MPFRDVV-----SWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
M + + CM+D + G + A + M M+ + V W LL
Sbjct: 271 METNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLG 321
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/594 (32%), Positives = 320/594 (53%), Gaps = 20/594 (3%)
Query: 48 NQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS 107
++ +P+V +LQ ++ +IH ++ +G + FA + V+ L +
Sbjct: 136 DEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVN-LYAKCRQIE 194
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
+ F+ + + D NT++ + A+ + M + + T +
Sbjct: 195 DAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQ-MQEAGQKPDSITLVSVLPAV 253
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
A +++LR G+ +H + GFE + V +++ Y CG V AR VF+ ++V+WN
Sbjct: 254 ADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWN 313
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV----DVGDMEAANGLFDLMPFR 283
+MIDGY +N E A F M + + N + G + ++GD+E + L+ +
Sbjct: 314 TMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEK 373
Query: 284 ----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
DV N +I Y+K V A + F + + VV+WN ++ Y + E L LF
Sbjct: 374 KIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLF 433
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
M D KP+ +L+SV+TA A++ V +WIH + + +V + T+L+ +AKC
Sbjct: 434 CEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKC 493
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + AR +FD M E++V++WN+MI GYG +G G +AL++F EM+ PN+ TF+ V+
Sbjct: 494 GAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVI 553
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
+AC+H+G+V EG +YF+ M+ Y +EP ++HYG MVDLLGRAG + D+ + + +P++ G
Sbjct: 554 AACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPG 613
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+ GA+L AC H N ELG+ A L +L+P D G +VLL+N+YAS WD+V +R
Sbjct: 614 ITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTA 673
Query: 580 MKEKELEKAVGSSLVHPGEFASE-----SIVENCPPHRKCIVYSMLGEIGAQMK 628
M++K ++K G SLV E +E S N P ++ +Y+ L +G +MK
Sbjct: 674 MEKKGIQKTPGCSLV---ELRNEVHTFYSGSTNHPQSKR--IYAYLETLGDEMK 722
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 247/490 (50%), Gaps = 20/490 (4%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
HP LE C+++KE HQI ++ +G + ++++ C +S++ + F+ ++
Sbjct: 45 HPSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFC-KFNSITEAARVFEPVE 103
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ +T++K + + A+ FY E+M V Y F L ++ LR G+
Sbjct: 104 HKLDVLYHTMLKGYAKNSTLRDAVRFY-ERMRCDEVMPVVYDFTYLLQLSGENLDLRRGR 162
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H ++ GF+ +LF +++++Y+ C ++ DA K+FE P DLV+WN+++ GY +N
Sbjct: 163 EIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQN- 221
Query: 238 EVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW-- 288
GFAR + + D T S++ D+ + + FR +
Sbjct: 222 --GFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGY-AFRAGFEYMV 278
Query: 289 ---NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
M+D Y K G+V SAR F M RNVVSWN ++ Y + + E F +M+
Sbjct: 279 NVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDE 338
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+P S+M L ACAN+G ++ G+++H + + +I DV + SL++MY+KC +D+A
Sbjct: 339 GVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIA 398
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+VF N+ K VV+WN+MI+GY +G +AL +F EM+ P+ T + V++A
Sbjct: 399 ASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADL 458
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
+ + W L R ++ V ++D + G ++ + +L L E W A
Sbjct: 459 SVTRQAKWIHGLAIRTL-MDKNVFVCTALIDTHAKCGAIQTARKLFD-LMQERHVITWNA 516
Query: 526 LLSACSTHSN 535
++ T+ +
Sbjct: 517 MIDGYGTNGH 526
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 289/534 (54%), Gaps = 18/534 (3%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H + SG + D+F AS L KL +LS + + FD + PD + NT++
Sbjct: 145 LHALAVASGFAADNFVAS-ALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL---- 199
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
AL + A V + T + A + + G+ VHA KCG V
Sbjct: 200 SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259
Query: 196 NSLIHMYSVCGEVLDARKVFE--DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
LI +Y+ CG++ AR +F+ +GP DLVT+N++I GY N VG + ELF +
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGP--DLVTYNALISGYSINGMVGSSVELFKELVGMG 317
Query: 254 IFTWNSMISGYVDVGD---MEAANGLFDLMPFRDVVSWNCMIDG-----YAKIGNVTSAR 305
+ +S + + V E G + + N + Y + ++ SAR
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FD M + + SWN +++ Y + + LF +M + +PN ++ S L+ACA +G
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ +G+W+H I +++ +V + T+L+ MY KCG + AR +FD+M KNVVSWN MI
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMIS 497
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GYG+HGQG +AL+++ +M P +TF+ VL AC+H G+V EG F M Y I
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGIT 557
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA-GPALWGALLSACSTHSNSELGKIVAQ 544
P +EH CMVDLLGRAG ++++ EL+S+ P A GP +WGALL AC H + +L K+ +Q
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQ 617
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
L ELEP + G YVLLSN+Y S+ ++ E +R+ K ++L K G +L+ G+
Sbjct: 618 KLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGD 671
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 209/463 (45%), Gaps = 27/463 (5%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
L+ + ST+ Q+ L SG + D AS +L + + S + + + P
Sbjct: 28 LRLISLSSTLGHLDQLLAVSLASGHYTLDHAPASSLLLRYASLRSPPAHLLRLYRAFPRP 87
Query: 120 DAFMCNTIMKSF------LMLNDPFGALSFYYEKM-MAKFVEHNHYTFPLLGKVCAGIRS 172
D F+ N++++S L+ P + SF + +A + P A +R
Sbjct: 88 DRFLRNSLLRSLPTLRADLLFPSP-DSFSFAFAATSLASSCSRGGISPP--SAASAALRP 144
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L HA V GF D FV ++L +Y DARKVF+ P D V WN+++ G
Sbjct: 145 L------HALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAG 198
Query: 233 YVKNREV-GFARELFDFMPERDIFTWNSMISGYVDVGD------MEAANGLFDLMPFRDV 285
+ + F R D T S++ +V + + A L V
Sbjct: 199 LSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
V+ +I YAK G++ AR+ FDRM ++V++N L++ Y + LF ++
Sbjct: 259 VTG--LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGM 316
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+P+ ++L++++ + G + +H+++ K + + +ST+L T+Y + MD A
Sbjct: 317 GLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSA 376
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
R FD M EK + SWN+MI GY +G E A+ +F +M+ PN T LSAC
Sbjct: 377 RRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQL 436
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
G + G W ++ K+E V ++D+ + G + ++
Sbjct: 437 GALSLGKWVHKIIAN-EKLELNVYVMTALIDMYVKCGSIAEAR 478
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 312/612 (50%), Gaps = 78/612 (12%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRV--LKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
VK ++H ++L G ++ + + L C L V F+ + D NT+
Sbjct: 149 VKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEV---CQLFEKMTHRDVISWNTM 205
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ +++ AL + ++M+ V + T L CA ++ L GK++H IV
Sbjct: 206 ISCYVLKGMYREALDLF-DEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNK 264
Query: 188 FELDLFVRNSLIHMYSVCGE---------------------------------VLDARKV 214
+ + N L+ MYS CG+ + AR++
Sbjct: 265 LWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQL 324
Query: 215 FEDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPER---------------- 252
F+ LV+W +M+ GYV+ + ELF + +P+
Sbjct: 325 FDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDF 384
Query: 253 -----------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY 295
D F N+++ Y G ++ A F+ +P + SWN M+DG+
Sbjct: 385 DLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGF 444
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
+ G V AR+ F+++ +++VSWN ++ YV+ + E +F +M + KP++ +L+
Sbjct: 445 CRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLI 504
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
S+L++CA +G ++ G W++ YI+K I D +L T+L+ MY KCG +++A +F + EK
Sbjct: 505 SLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEK 564
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
NV W +M+ Y M GQ +A+++++EME+RG P+ TFI +L+AC+H G+V EG+ YF
Sbjct: 565 NVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYF 624
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ ++ Y I P + HYGCMVDLLGR G + ++ + + ++P+E ++W +L+ AC +H N
Sbjct: 625 NKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHN 684
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
EL + + L+E++P + G +VLLSNIYA G+WD+V +R + E + K G +++
Sbjct: 685 VELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIE 744
Query: 596 PGEFASESIVEN 607
E + N
Sbjct: 745 QNGVVHEFVASN 756
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 260/544 (47%), Gaps = 76/544 (13%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
H I+ L+SCS ++EF IH L+ + L D S+VL L S++++ +
Sbjct: 36 HWIIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFL-LSVNNLDCAHQILSYSH 94
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
EP++ + NT++++ L P L YY M+ + V + TF L C ++ G
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYH-MVTQGVLLDISTFHFLIHACCKNFDVKLGS 153
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH RI+KCGF + + N+L+ +YS CG++ + ++FE D+++WN+MI YV
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKG 213
Query: 238 EVGFARELFDFM------PER---------------------------DIFTW------N 258
A +LFD M P+ D W N
Sbjct: 214 MYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLN 273
Query: 259 SMISGYVDVGDMEAANGLFDLMPFR--DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
++ Y G M+ A+GL DVV W ++ GY K + AR FD+M R++
Sbjct: 274 CLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSL 333
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSW +++ YV+ YCE L LF +M + P+E +L++VL+AC ++ D+G+ +H++
Sbjct: 334 VSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAF 393
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVM-------------------------------DLA 405
I + D L +LL +YAKCG + D A
Sbjct: 394 IVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKA 453
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
R+ F+ + EK++VSWN+M+ Y H ++ E+F +M+ P+ T I +LS+C
Sbjct: 454 RDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKV 513
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G + G W +++ +I ++D+ G+ G + + E+ +++ +E +W A
Sbjct: 514 GALNHGIWVNVYIEK-NEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTA 571
Query: 526 LLSA 529
+++A
Sbjct: 572 MMAA 575
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 301/546 (55%), Gaps = 14/546 (2%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE 118
P+L+ + T + H +L GL + AS L V + FD ++
Sbjct: 76 PLLRAAQGPGTAAQLHACALRL---GLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRH 132
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
D N ++ S L N + +M+ + V + T + +C +
Sbjct: 133 RDVPAWNAML-SGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALA 191
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H VK G + +LFV N++I +Y G + + RKVF+ DLVTWNS+I G+ + +
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQ 251
Query: 239 VGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWN 289
V A E+F M + D+ T S+ S GD+ + M R D+++ N
Sbjct: 252 VASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGN 311
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-K 348
++D YAK+ + +A+ FD M +R+ VSWN L+ Y++ E + ++D M + + K
Sbjct: 312 AIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLK 371
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P + + +SVL A +++G + G +H+ K + DV + T ++ +YAKCG +D A +
Sbjct: 372 PIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLL 431
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ ++ WN++I G G+HG G KAL +F +M++ G +P+ TF+ +L+AC+HAG+V
Sbjct: 432 FEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLV 491
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
+G +F++MQ Y I+P +HY CMVD+ GRAG + D+ + + +P++ A+WGALL
Sbjct: 492 DQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLG 551
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N E+GK+ +Q+L EL+P++ G YVL+SN+YA GKWD V+ +R +++ + L+K
Sbjct: 552 ACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKT 611
Query: 589 VGSSLV 594
G S +
Sbjct: 612 PGWSSI 617
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 306/592 (51%), Gaps = 50/592 (8%)
Query: 64 LESCSTV---KEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +CS + E Q+H +L GL D F ++ ++ V L FDG+ E +
Sbjct: 137 LSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIH-FYAECGKVDLGRKLFDGMLERN 195
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+++ + + A+S +++ M VE N T + CA ++ L GKKV
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQ-MGEAGVEPNPVTMVCVISACAKLKDLELGKKVC 254
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ I + G EL + N+L+ MY CG++ AR++F++ +LV +N+++ YV +
Sbjct: 255 SYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWAS 314
Query: 241 FARELFDFM----PERDIFT-------------------------------W----NSMI 261
+ D M P D T W N++I
Sbjct: 315 DVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAII 374
Query: 262 SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
Y+ G EAA +F+ MP + VV+WN +I G + G++ A FD M R++VSWN
Sbjct: 375 DMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNT 434
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ V+ + E + LF M + +++ + +AC +G +D+ +W+ +YI+K
Sbjct: 435 MIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKND 494
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
I D+ L T+L+ M+++CG A +VF M +++V +W + I M G E A+E+F
Sbjct: 495 IHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFN 554
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
EM ++ P+D F+ +L+AC+H G V +G F M++ + I P + HYGCMVDLLGRA
Sbjct: 555 EMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRA 614
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
GL+ ++ +L+ +P+E +WG+LL+AC H N EL A+ L +L P G +VLLS
Sbjct: 615 GLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLS 674
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSS------LVHPGEFASESIVEN 607
NIYAS GKW +V +R MKEK ++K GSS L+H ES EN
Sbjct: 675 NIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAEN 726
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 151/580 (26%), Positives = 268/580 (46%), Gaps = 52/580 (8%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF--DGIQEPDA 121
L +C T+KE Q+H ++ GL AS + K + +S+ +L L + + + D
Sbjct: 32 LVNCKTLKELKQLHCDMMKKGLLCHK-PASNLNKLIASSVQIGTLESLDYARNAFGDDDG 90
Query: 122 FMCNTIMKSFLMLNDPFGALS----FYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
M + M + L+ L Y +M+ + + YTFP L C+ I +L EG
Sbjct: 91 NMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGV 150
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH ++K G E D+FV NSLIH Y+ CG+V RK+F+ ++V+W S+I+GY
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRD 210
Query: 238 EVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANG----LFDLMPFRDVVSWN 289
A LF M E + T +IS + D+E + +L + N
Sbjct: 211 LSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVN 270
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++D Y K G++ +AR FD +N+V +N +++ YV + + L + D M++ +P
Sbjct: 271 ALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRP 330
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
++ +++S + ACA +G + +G+ H+Y+ + ++ +S +++ MY KCG + A VF
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVF 390
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQG-------------------------------EKALE 438
++M K VV+WNS+I G G E+A+E
Sbjct: 391 EHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIE 450
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
+F EM+ +G + T + + SAC + G + W +++ I ++ +VD+
Sbjct: 451 LFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEK-NDIHVDLQLGTALVDMF 509
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
R G + + ++ A W A + + N+E G I + M + P V
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSA-WTAAIGVMAMEGNTE-GAIELFNEMLEQKVKPDDVV 567
Query: 559 LLSNIYA-SEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
++ + A S G V+ R++ E + +VH G
Sbjct: 568 FVALLTACSHG--GSVDQGRQLFWSMEKAHGIRPHIVHYG 605
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 155/332 (46%), Gaps = 15/332 (4%)
Query: 150 AKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRN--SLIHMYSVCG- 206
A E N T K+ ++L+E K++H ++K G N LI G
Sbjct: 15 ASLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGT 74
Query: 207 -EVLD-ARKVF--EDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPERDIFT 256
E LD AR F +DG + L +N +I GY A L+ +P++ F
Sbjct: 75 LESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFP 134
Query: 257 WN-SMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+ S S + + + +G M D+ N +I YA+ G V R FD M R
Sbjct: 135 FLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLER 194
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
NVVSW L+ Y E + LF +M +PN +++ V++ACA + +++G+ +
Sbjct: 195 NVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVC 254
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
SYI + ++ ++ +L+ MY KCG + AR +FD KN+V +N+++ Y H
Sbjct: 255 SYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWAS 314
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
L + EM ++GP P+ T + ++AC G
Sbjct: 315 DVLVILDEMLQKGPRPDKVTMLSTIAACAQLG 346
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 234/383 (61%), Gaps = 13/383 (3%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D S+I Y G + +A +FD +D+ WN MI GY K GN+ AR FD M
Sbjct: 103 DAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSGNLACARELFDVMP 162
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQ 371
RNVVSW ++ Y + K E + +F RM + +P+ +L+SVL+AC ++G +D+G+
Sbjct: 163 ARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVLSACGDLGAVDLGE 222
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
W+H ++ + + + L +++ MY K G + A VF+ M +K+VV+W ++I G+ +HG
Sbjct: 223 WVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIAGFALHG 282
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
G +A+EMF ME PND TF+ +LSAC+H G+ G WYF +M Y+I+ +VEHY
Sbjct: 283 LGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHY 342
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
GCMVDLLGRAG + ++++LV +P +A A+WGALL+A TH ++ELGK HL+ELEP
Sbjct: 343 GCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEP 402
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS------LVHPGEFASESIV 605
+ G Y+LLSNIYA + +WD+V LR+ MK++ L G+S +VH EF S
Sbjct: 403 HNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGASSIEVDGMVH--EFTSRDGS 460
Query: 606 ENCPPHRKCIVYSMLGEIGAQMK 628
C H+ C V L EI MK
Sbjct: 461 HPC-LHKICKV---LCEITTDMK 479
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 146/314 (46%), Gaps = 45/314 (14%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G ++H+ IV+ G D V SLI Y CG V AR VF+ D+ WN MI GYVK
Sbjct: 88 GPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVK 147
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR------------ 283
+ + ARELFD MP R++ +W ++I Y + A +F M
Sbjct: 148 SGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLS 207
Query: 284 -----------DVVSW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
D+ W N +ID Y K+G V A F+ M ++
Sbjct: 208 VLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKS 267
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+W ++A + E + +F RM + PN+ + +++L+AC+++G+ D+G+W
Sbjct: 268 VVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFK 327
Query: 376 Y-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ- 432
+ + RIK V ++ + + G + A+++ +M K N W +++ HG
Sbjct: 328 IMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDA 387
Query: 433 --GEKALEMFMEME 444
G++AL +E+E
Sbjct: 388 ELGKQALLHLIELE 401
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 46/243 (18%)
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+G +HS I + + D +S SL+ Y CG + AR+VFD T+K++ WN MI GY
Sbjct: 87 LGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYV 146
Query: 429 MHG-------------------------------QGEKALEMFMEME-KRGPTPNDATFI 456
G Q +A+E+F M+ + G P+ +
Sbjct: 147 KSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALL 206
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR---------DS 507
VLSAC G V G W + R + ++ ++D+ + G +R D
Sbjct: 207 SVLSACGDLGAVDLGEWVHRFVVR-RGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQ 265
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+ +V+ + AG AL G L A E+ + + L +V L+++
Sbjct: 266 KSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDL---- 321
Query: 568 GKW 570
G+W
Sbjct: 322 GRW 324
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 10/223 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + T++ ++ + P A+ + + + +E + + C +
Sbjct: 157 LFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVLSACGDLG 216
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++ G+ VH +V+ G + + N++I MY G V A +VFE +VTW ++I
Sbjct: 217 AVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIA 276
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM--PFR-- 283
G+ + A E+F M ++ T+ +++S VG + F +M +R
Sbjct: 277 GFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIK 336
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + CM+D + G + A++ M + N W LLA
Sbjct: 337 QRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLA 379
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 266/495 (53%), Gaps = 70/495 (14%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y +M+ E N +T+ L CA R LREG++VH R+V G+ ++FVR SL+++Y++
Sbjct: 18 YNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAI 77
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G RK AR +FD + +R+I +WNS+++GY
Sbjct: 78 AGGYDGVRK----------------------------ARRVFDEIVDRNIVSWNSLLAGY 109
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
V GD++ A +FD MP R+VVSW MI G A+IG
Sbjct: 110 VRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIG------------------------- 144
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
RCK + L LF M R K ++ +L++ L+ACA +G + +G WIHSYI + R+
Sbjct: 145 ---RCK---QALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDE-RLHA 197
Query: 385 D-----VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
V L+ SL+ MYA CGV+D A VF M +++ +SW SMI G+ G E+AL +
Sbjct: 198 GNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGV 257
Query: 440 FMEMEKRGP---TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
F M++ G P+ TFI VL AC+HAG V +G +F+ M + + I P++EHYGCMVD
Sbjct: 258 FQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVD 317
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL-MELEPRDPG 555
LL RAG + ++ L+ +PM+ A+WGALL C H N+EL VAQ L +EL+P
Sbjct: 318 LLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLALELKPDQAA 377
Query: 556 PY-VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
Y VLLSN+YA+ +W +V +R+ M E + K G S V + + +
Sbjct: 378 GYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHAS 437
Query: 615 IVYSMLGEIGAQMKM 629
VY ML +I Q K+
Sbjct: 438 SVYEMLSKITRQAKL 452
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 34/172 (19%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+ L++RM+ +A+PNE + ++ CA ++ G+ +H + +V + TSL+ +
Sbjct: 15 VELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNL 74
Query: 396 YA----------------------------------KCGVMDLARNVFDNMTEKNVVSWN 421
YA +CG +D AR +FD M E+NVVSW
Sbjct: 75 YAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWT 134
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+MI G G+ ++AL +F EM + G + + LSAC G + G W
Sbjct: 135 TMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTW 186
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 292/535 (54%), Gaps = 10/535 (1%)
Query: 68 STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
+ +K +IH QL+ + + + FA + V+ + + + FD + E D NTI
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVN-MYAKCRQIDDAYKMFDRMPERDLVSWNTI 219
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ F AL +M + + T + A + L GK +H ++ G
Sbjct: 220 IAGFSQNGFAKKALELVL-RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG 278
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
F + + +L MYS CG V AR +F+ +V+WNSM+DGYV+N E A +F+
Sbjct: 279 FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFE 338
Query: 248 FMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMIDGYAKIG 299
M E I T + D+GD+E + + D+ N +I Y+K
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V A + F+ + R VSWN ++ Y + E L F M KP+ +++SV+
Sbjct: 399 RVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIP 458
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A A + V +WIH I + + ++ ++T+L+ MY+KCG + +AR +FD +++++V++
Sbjct: 459 ALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT 518
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI GYG HG G AL++F +M+K PND T++ V+SAC+H+G+V EG +F M+
Sbjct: 519 WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMK 578
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ Y +EP ++HYG MVDLLGRAG ++++ + + +P+ G ++GA AC H N E+G
Sbjct: 579 QDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVG 638
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ L EL P + G +VLL+NIYAS KW +V +R+ M++K L+K G S+V
Sbjct: 639 EKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVV 693
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 262/504 (51%), Gaps = 18/504 (3%)
Query: 41 PKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC 100
P T ++ +P HP LE C+++KE HQI ++ +GL + ++++ L
Sbjct: 33 PFHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVS-LF 91
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
+ S++ + F+ I + + +T++K + + AL+F +M V+ Y F
Sbjct: 92 SKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLC-RMRYDDVKPVVYNF 150
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
L KVC L+ GK++H +++ F ++F +++MY+ C ++ DA K+F+ P
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFM-------PERDIFTWNSMISGYVDVGDM--- 270
DLV+WN++I G+ +N GFA++ + + D T +++ DVG +
Sbjct: 211 RDLVSWNTIIAGFSQN---GFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 271 EAANGLFDLMPFRDVVSWN-CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
++ +G F +V+ + + D Y+K G+V +AR FD M + VVSWN ++ YV+
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
+ + + +F++M+ P ++M L ACA++G ++ G+++H ++ + + D+ +
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
SL++MY+KC +D+A ++F+N+ + VSWN+MI+GY +G+ +AL F EM+ G
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
P+ T + V+ A + W L+ R ++ + +VD+ + G + + +
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC-LDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 510 LVSKLPMEAGPALWGALLSACSTH 533
L + + W A++ TH
Sbjct: 507 LFDMIS-DRHVITWNAMIDGYGTH 529
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 271/478 (56%), Gaps = 9/478 (1%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
+ L + C ++++ GK++HA++ GF D + L+++Y VC + AR +F+
Sbjct: 77 NYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRI 136
Query: 219 PVWDLVTWNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
P ++ WN +I GY N V ++FD+ D FT+ ++ + +E
Sbjct: 137 PKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGR 196
Query: 275 GLFDLMPF----RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ + + +DV +ID YAK G V SAR FD++ +R+ V WN +LA Y +
Sbjct: 197 EIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNG 256
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
CL L M+ +P EA+L++ ++A A+ + G+ +H + + + T
Sbjct: 257 HPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKT 316
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
+L+ MYAKCG + +ARN+F+ + K VVSWN+MI GY MHG +AL++F EM R P
Sbjct: 317 ALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKP 375
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ TF+ VLSAC+H G++ EGW +F+ M R YKI+P V+HY CMVDLLG +G + ++ L
Sbjct: 376 DHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL 435
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ ++ + +WGALL++C H+N ELG+I + L+ELEP D G YV+LSNIYA GKW
Sbjct: 436 IMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKW 495
Query: 571 DEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ V LR++M ++ L+K++ S + + + +YS L +G MK
Sbjct: 496 EGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMK 553
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 209/414 (50%), Gaps = 26/414 (6%)
Query: 64 LESC---STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L+SC +K Q+H Q+ ++G D+ A++++ C S+S + L FD I + +
Sbjct: 82 LQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC-DSLSSARLLFDRIPKHN 140
Query: 121 AFMCNTIMKSFLMLNDPF-GALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
F+ N +++ + N P+ A+ YY+ V N +TFP + K CA + ++ G+++
Sbjct: 141 IFLWNVLIRGY-AWNGPYEAAVQLYYQMFDYGLVPDN-FTFPFVLKACAALSAIEHGREI 198
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +V+ G+E D+FV +LI MY+ CG V AR+VF+ V D V WNSM+ Y +N
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN----CM 291
L M + T + IS D + L L ++ S + +
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTAL 318
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+D YAK G+V ARN F+R+ ++ VVSWN ++ Y E L LF+ M R AKP+
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDH 377
Query: 352 ASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + VL+AC++ G+++ G + + I+ +I P V T ++ + G +D A N+
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIM 437
Query: 411 NM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
M + W +++ +H GE ALE +E+E P+DA +LS
Sbjct: 438 QMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELE-----PDDAGNYVILS 486
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P ++ S+L +C I G+ +H+ + D +++T L+ +Y C + AR +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD + + N+ WN +I GY +G E A++++ +M G P++ TF VL AC +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 469 LEGWWYFDLMQRIYKI--EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
G ++ + + + E V ++D+ + G + + E+ K+ + LW ++
Sbjct: 193 EHG---REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDA-VLWNSM 248
Query: 527 LSACSTHSNSE 537
L+A S + + +
Sbjct: 249 LAAYSQNGHPD 259
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 305/562 (54%), Gaps = 16/562 (2%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H + +G + D+F AS L KL LS V + FD + PD + NT++
Sbjct: 136 LHALAVAAGYAADTFVAS-ALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL---- 190
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
A+ + + V + T + A + + G+ VH+ KCG V
Sbjct: 191 SGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVL 250
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
LI +YS CG+V AR +F+ DLV +N++I GY N VG + LF + ++
Sbjct: 251 TGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLW 310
Query: 256 TWNSMISGYVDV----GDMEAANGLFDLMPFRDVVSWNCMIDG-----YAKIGNVTSARN 306
+S + + V G A L + + + N + + ++ ++ SAR
Sbjct: 311 PNSSTLVALIPVHSPFGHDLLAQCLHGFV-LKSGFTANSPVSTAITTLHCRLNDMESARK 369
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
FD M + + SWN +++ Y + + LF++M++ + +PN ++ S L+ACA +G
Sbjct: 370 AFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGA 429
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ +G+W+H I + ++P+V + T+L+ MYAKCG + AR +F+ M KNVVSWN+MI G
Sbjct: 430 LSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAG 489
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
YG+HGQG +AL+++ +M P ATF+ VL AC+H G+V EGW F M Y I P
Sbjct: 490 YGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINP 549
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA-GPALWGALLSACSTHSNSELGKIVAQH 545
+EH CMVDLLGRAG ++++ EL+S+ P A GP +WGALL AC H +S+L K+ +Q
Sbjct: 550 GIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQK 609
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
L EL+P + G YVLLSN++ S+ ++ E +R+ K ++L K G +L+ G +
Sbjct: 610 LFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMA 669
Query: 606 ENCPPHRKCIVYSMLGEIGAQM 627
+ + +YS L ++ A+M
Sbjct: 670 GDRAHPQSEAIYSYLEKLTAKM 691
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 214/489 (43%), Gaps = 23/489 (4%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
L P L+ + ST++ QI L SG D A+ +L + + + + F
Sbjct: 17 LRRPYLRLVALSSTLRHLDQILAVSLASGHYPLDPAPATSLLLRYASLRAPTGHLLRLFR 76
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPF-----GALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
G PD F+ N +++S L + SF + + L G
Sbjct: 77 GFPRPDRFLRNALLRSLPSLRPRLLFPCPDSFSFAFAAT----------SLAALCSRGGG 126
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
S + +HA V G+ D FV ++L +Y V V ARKVF+ P D V WN++
Sbjct: 127 AASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTL 186
Query: 230 IDGYVKNREV-GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
+ G + V FAR + D D T S++ +V D+ + +
Sbjct: 187 LAGLSGSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEH 246
Query: 289 NCMIDG----YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
++ G Y+K G+V SAR FD M ++V++N L++ Y + LF ++
Sbjct: 247 EHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMT 306
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
PN ++L++++ + G + Q +H ++ K + +ST++ T++ + M+
Sbjct: 307 LGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMES 366
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR FD M EK + SWN+MI GY +G E A+ +F +M K PN T LSAC
Sbjct: 367 ARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQ 426
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
G + G W ++ +EP V ++D+ + G + ++ + + + W
Sbjct: 427 LGALSLGKWLHRIITE-EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMD-NKNVVSWN 484
Query: 525 ALLSACSTH 533
A+++ H
Sbjct: 485 AMIAGYGLH 493
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 284/483 (58%), Gaps = 25/483 (5%)
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L K C + L EGK +HA ++ F DL ++N+L+++Y+ CG+++ ARK+F++ D
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPER-------DIFTWNSMIS-----GYVDVGDM 270
+VTW ++I GY ++ ++ +PE + FT S++ G DV
Sbjct: 81 VVTWTALITGYSQHDR---PQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 271 EAANGLFDLMPFRDVVSWNCMI-DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+GL + V +C I D YA+ ++ A+ FD M +N VSWN L+A Y R
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
+ LF M+R + KP + SVL ACA+MG ++ G+W+H+ + K K +
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
+LL MYAK G ++ A+ VFD + +++VVSWNSM+ GY HG G+ AL+ F EM +
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
PND TF+CVL+AC+HAG++ EG YFD+M++ Y +EP++ HY MVDLLGRAG + + +
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQ 376
Query: 510 LVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGK 569
+S++P++ A+WGALL AC H N ELG A+ + EL+ PG +VLL NIYA G+
Sbjct: 377 FISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGR 436
Query: 570 WDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV----ENCPPHRKCIVYSMLGEIGA 625
W++ +R++MKE ++K S V E +E V ++ P R+ I ++M +I
Sbjct: 437 WNDAAKVRKMMKESGVKKEPACSWV---EMENEVHVFVADDDAHPQRREI-HNMWEQISD 492
Query: 626 QMK 628
++K
Sbjct: 493 KIK 495
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 342 MIRGDAKPNEAS---LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
+IR K N + ++L C ++ ++ G+ IH+ + R + D+++ +LL +YAK
Sbjct: 3 LIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAK 62
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG + AR +FD M+ ++VV+W ++I GY H + + AL + EM + G PN T +
Sbjct: 63 CGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASL 122
Query: 459 LSACTHAGM--VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
L A + G VL+G L R Y + V ++D+ R + ++ +L+ + +
Sbjct: 123 LKAASGVGSTDVLQGRQLHGLCLR-YGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMV 180
Query: 517 EAGPALWGALLSA 529
W AL++
Sbjct: 181 SKNEVSWNALIAG 193
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 11/266 (4%)
Query: 68 STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
+ V + Q+H L G + + + +L + + + L FD + + N +
Sbjct: 132 TDVLQGRQLHGLCLRYGYDSNVYVSCAILD-MYARCHHLEEAQLIFDVMVSKNEVSWNAL 190
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ + A + M+ + V+ H+T+ + CA + SL +GK VHA ++K G
Sbjct: 191 IAGYARKGQGDKAFCLF-SNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWG 249
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
+L FV N+L+ MY+ G + DA+KVF+ D+V+WNSM+ GY ++ A + F+
Sbjct: 250 EKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFE 309
Query: 248 FMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDV----VSWNCMIDGYAKIG 299
M I T+ +++ G ++ FD+M +V + M+D + G
Sbjct: 310 EMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAG 369
Query: 300 NVTSARNCFDRMCMRNVVS-WNILLA 324
++ A M ++ + W LL
Sbjct: 370 HLDRAIQFISEMPIKPTAAVWGALLG 395
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 265/469 (56%), Gaps = 19/469 (4%)
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
ALS Y +M+ N +TFP K CA + G + H +I K G + FV+ LI
Sbjct: 24 ALSLY-PQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 82
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVT--WNSMIDGYVKNREVGFARELFDFMPERDI--- 254
MY V +ARKVFE+ +T +N+++ GYV N + A LF M E +
Sbjct: 83 SMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVN 142
Query: 255 -FTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
T +I V ++E + L FD DV NC I Y K G+V A+
Sbjct: 143 SVTLLGLIPACVSPINLELGSSLHCSTLKYGFD----SDVSVVNCFITMYMKCGSVNYAQ 198
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FD M ++ ++SWN +++ Y + L L+ M P+ +L+ VL++CAN+G
Sbjct: 199 KLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLG 258
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+G + +Q + L+ +L+ MYA+CG + A+ VFD M E+ +VSW ++I
Sbjct: 259 AQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIG 318
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GYGMHG GE A+++F EM + G P+ F+CVLSAC+HAG+ +G YF +M+R Y++E
Sbjct: 319 GYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLE 378
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P EHY CMVDLLGRAG +++++ L+ +P++ A+WGALL AC H N EL ++ +
Sbjct: 379 PGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFER 438
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ELEP + G YVLLSNIY++ V +R +MKEK+L+K G S V
Sbjct: 439 VIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 177/403 (43%), Gaps = 26/403 (6%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q H Q+ G + F + ++ C + +F + +C + S +
Sbjct: 61 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 120
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N + +M + V N T L C +L G +H +K GF+ D+ V
Sbjct: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 180
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP---- 250
N I MY CG V A+K+F++ PV L++WN+M+ GY +N EL+ M
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVT 302
D T ++S ++G + + F PF + N +I+ YA+ GN+T
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLN----NALINMYARCGNLT 296
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
A+ FD M R +VSW ++ Y ++LF MIR +P+ + + VL+AC+
Sbjct: 297 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 356
Query: 363 NMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSW 420
+ G+ D G ++ + +++P + ++ + + G + A+ + ++M K + W
Sbjct: 357 HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 416
Query: 421 NSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
+++ +H E A E +E+E P + + +LS
Sbjct: 417 GALLGACKIHKNVELAELAFERVIELE-----PENIGYYVLLS 454
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 319 WNILL-ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN L L RC+ + + L L+ +M+R +PN + L +CA + + +G H I
Sbjct: 8 WNTQLRELAKRCQ-FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 66
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQGEK 435
K + + T L++MY K ++D AR VF+ + K V +N+++ GY + +
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ +F +M + G N T + ++ AC + + LE Y + V C +
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACV-SPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ + G + +++L ++P++ G W A++S
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVK-GLISWNAMVSG 218
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 262/509 (51%), Gaps = 40/509 (7%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+ L C R L GK+VHA F + + N LIHMY+ CG ++DA+ +F++ P
Sbjct: 66 YSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP 125
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
DL +WN+MI GY + AR+LFD MP RD F+WN++ISGYV G A LF +
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRM 185
Query: 280 MPFR----------------------------------------DVVSWNCMIDGYAKIG 299
M D V W ++D Y K G
Sbjct: 186 MQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCG 245
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
++ AR FD+M +++VSW ++ E LF ++ +PNE + VL
Sbjct: 246 SLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLN 305
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA++ +G+ +H Y+ + P +++L+ +Y+KCG + AR VF+ M ++VS
Sbjct: 306 ACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVS 365
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W S+I+GY +GQ + AL+ F + + G P++ TF+ VLSACTHAG+V G YF ++
Sbjct: 366 WTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK 425
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ + +HY C++DLL R+G +++E ++ +PM+ LW +LL C H N EL
Sbjct: 426 EKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELA 485
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
+ A+ L ELEP +P Y+ LSNIYA+ G W E +R M + + K G S +
Sbjct: 486 ERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQ 545
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+V + + ++ LGE+ +MK
Sbjct: 546 VHVFLVGDTSHPKISDIHEYLGELSKKMK 574
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 200/438 (45%), Gaps = 32/438 (7%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
+P + +S+ ++ C ++ + Q+L + Q + + ++ + +
Sbjct: 95 IPGIVISNRLIHMYAKCGSL-----VDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQAR 149
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD + D F N ++ ++ AL + + N +T A I
Sbjct: 150 KLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAI 209
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SLR GK++H +++ G ELD V +L+ +Y CG + +AR +F+ D+V+W +MI
Sbjct: 210 SSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI 269
Query: 231 -----DGYVKNREVGFA--RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM--- 280
DG K GF+ R+L + +T+ +++ D+ + + M
Sbjct: 270 HRCFEDGRKKE---GFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRV 326
Query: 281 ---PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
PF S ++ Y+K GN +AR F++M ++VSW L+ Y + L+
Sbjct: 327 GYDPFSFAAS--ALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQ 384
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMY 396
F+ ++R KP+E + + VL+AC + G++DIG ++ HS +K + ++ +
Sbjct: 385 FFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLL 444
Query: 397 AKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPND 452
A+ G A N+ DNM K + W S++ G +HG E+A + E+E P
Sbjct: 445 ARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENP---- 500
Query: 453 ATFICVLSACTHAGMVLE 470
AT+I + + +AG+ E
Sbjct: 501 ATYITLSNIYANAGLWTE 518
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P+ +++ AC +++G+ +H++ + P +++S L+ MYAKCG + A+
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+FD + +K++ SWN+MI GY G+ E+A ++F EM P ++ ++ V+S G
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM----PHRDNFSWNAVISGYVSQGW 175
Query: 468 VLEGWWYFDLMQ 479
+E F +MQ
Sbjct: 176 YMEALDLFRMMQ 187
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 272/463 (58%), Gaps = 12/463 (2%)
Query: 190 LDLFVR---------NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
LDLF + N++I + V +A+++F P D+++W +M+ G KN +
Sbjct: 180 LDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRID 239
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
AR LFD MP R++ +WN+MI GY ++ A LF+ MP R++ SWN MI G+ + G
Sbjct: 240 DARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGK 299
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLT 359
+ A + F +M +NVV+W +++ +V+ E L++F M + KPNE + +SVL
Sbjct: 300 LERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLG 359
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNV 417
AC+ + + GQ IH I K + + ++L+ MY+KCG ++LAR +FD+ + ++V
Sbjct: 360 ACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDV 419
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
VSWN MI Y HG G KA+ +F EM+ G P++ T+I +LSAC+HAG+V EG F+
Sbjct: 420 VSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFEN 479
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ R I+ + +H+ C+VDL GRAG ++++ + + L ++ ++W ALL+ C+ H + +
Sbjct: 480 LVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHID 539
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
LGK+ A+ L+E EP + G Y++LSNIYAS GKW E +R MK+K L+K G S + G
Sbjct: 540 LGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVG 599
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQISI 640
+V + +Y +L ++ +MK + ++I
Sbjct: 600 NTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLYEDLTI 642
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 211/424 (49%), Gaps = 52/424 (12%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-RDI 254
N LI G++ +AR+VFE+ P D+V+W ++I GY+K + A+ LFD +++
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
TW +++SGYV +E A LFD MP ++V+SWN MI+GYA+ G + A + F++M R
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPER 189
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID------ 368
NVVSWN ++ +++ + E LF+RM D S +++ + G ID
Sbjct: 190 NVVSWNTVITAFMQRRRVDEAQELFNRMPERDV----ISWTTMVAGLSKNGRIDDARLLF 245
Query: 369 -------IGQW---IHSYIQKCRIK---------PDVLLST--SLLTMYAKCGVMDLARN 407
+ W I Y Q R+ P+ LS+ +++T + + G ++ A +
Sbjct: 246 DKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVD 305
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAG 466
F M+ KNVV+W ++I G+ G+ E+AL++F EM+ PN+ TF+ VL AC+
Sbjct: 306 FFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLA 365
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEH------YGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
+ EG Q+I++I K + ++++ + G + + ++ +
Sbjct: 366 ALCEG-------QQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRD 418
Query: 521 AL-WGALLSACSTHSNSELGKIVAQHLMELEPR-DPGPYVLLSNIYASEGKWDE----VE 574
+ W +++A + H + + + L R D Y+ L + + G DE E
Sbjct: 419 VVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFE 478
Query: 575 NLRR 578
NL R
Sbjct: 479 NLVR 482
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+V FF + + ++ + AL + E A V+ N TF + C+
Sbjct: 303 AVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACS 362
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW--DLVTW 226
+ +L EG+++H I K ++ V ++LI+MYS CGE+ ARK+F+DG + D+V+W
Sbjct: 363 KLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSW 422
Query: 227 NSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFD-LMP 281
N MI Y + A LFD M D T+ +++S G ++ LF+ L+
Sbjct: 423 NGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVR 482
Query: 282 FRDVV----SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS-WNILLA 324
R + + C++D + + G + A + + ++ S W LLA
Sbjct: 483 DRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLA 530
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
I S ++ +V S L+T K G + AR VF+ M +++VVSW ++I GY G
Sbjct: 53 ISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGM 112
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
E+A +F ++ N T+ ++S + E FD M V +
Sbjct: 113 IEEAKTLF---DRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMP-----VKNVISWN 164
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
M++ R G + + +L K+P E W +++A
Sbjct: 165 TMIEGYARKGWIDQALDLFEKMP-ERNVVSWNTVITA 200
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 310/584 (53%), Gaps = 53/584 (9%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
+L +LQ S + + Q+H Q+L + L S ++ + + ++L+ + S+L F+
Sbjct: 6 NLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST--ILSIYSNLNLLHDSLLIFN 63
Query: 115 GIQEPDAFMC-NTIMKSFLMLNDPFGALSFYYEKMMA-KFVEHNHYTFPLLGKVCAGIRS 172
+ P + +I++ + +LSF+ + + + K+ +HN FP + K C ++
Sbjct: 64 SLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHN--VFPSVLKSCTLMKD 121
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYS---VCGEVLDARKVFEDGPVWDLVTWNSM 229
LR G+ VH I++ G DL+ N+L++MYS EV +KVF++G D+ +
Sbjct: 122 LRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEK 181
Query: 230 IDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA------NGLFDLMPFR 283
Y+ G R++F+ MP+RDI +WN++ISG G E A G DL P
Sbjct: 182 ESYYL-----GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDS 236
Query: 284 ---------------------------------DVVSWNCMIDGYAKIGNVTSARNCFDR 310
DV + +ID YAK V + F
Sbjct: 237 FTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYM 296
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+ + +SWN ++A V+ + E L+ F +M+ KPN S S++ ACA++ + +G
Sbjct: 297 LPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLG 356
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H YI + R +V ++++L+ MYAKCG + AR +FD M ++VSW +MIMGY +H
Sbjct: 357 KQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALH 416
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G A+ +F ME G PN F+ VL+AC+HAG+V E W YF+ M + Y+I P +EH
Sbjct: 417 GHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEH 476
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y + DLLGR G + ++ E +S + +E ++W LL+AC H N EL + V++ L ++
Sbjct: 477 YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD 536
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
P++ G YVLLSNIY++ G+W + LR M++K ++K S +
Sbjct: 537 PQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWI 580
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 263/483 (54%), Gaps = 60/483 (12%)
Query: 174 REGKKVHARIVKCGFELDLFVR---------NSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
R GK V AR LF R N++I Y ++ +A K+F++ P D V
Sbjct: 247 RHGKIVEAR--------KLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCV 298
Query: 225 TWNSMIDGYVKNREVGFARELFDFMP-------------------------------ERD 253
+W +MI+GYV+ ++ ARE+++ MP +RD
Sbjct: 299 SWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRD 358
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
WNSMI+GY G M A LF MP ++ VSWN MI GYA+ G + A F+ M +
Sbjct: 359 AICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGV 418
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RNV+SWN L+ +++ Y + L+ M + KP++++ L++CAN+ + +G+ +
Sbjct: 419 RNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQL 478
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H I K D+ +S +L+ MYAKCG + A VF ++ +++SWNS+I GY ++G
Sbjct: 479 HELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYA 538
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
+A F +M G P++ TFI +LSAC+HAG+ +G F M + IEP EHY C
Sbjct: 539 NEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSC 598
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
+VDLLGR G + ++ +V + ++A LWG+LL+AC H N ELGKI A L+ELEP +
Sbjct: 599 LVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHN 658
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH------------PGEFAS 601
Y+ LSN++A G+W++VE LR +M+E+ K G S + PG+ +
Sbjct: 659 ASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRT 718
Query: 602 ESI 604
ESI
Sbjct: 719 ESI 721
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 196/417 (47%), Gaps = 70/417 (16%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
VS + FD + + + NT++ +L N A K+ E +++++ L+
Sbjct: 64 VSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEA-----HKLFDLMAERDNFSWALM-I 117
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C + + E + +V +LD N++I Y+ G DA KVFE PV DLV+
Sbjct: 118 TCYTRKGMLEKARELFELVPD--KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVS 175
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
+NSM+ GY +N ++G A + F+ M ER++ +WN M++G+V+ D+ +A LF+ +P +
Sbjct: 176 YNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNA 235
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR---- 341
VSW M+ G+A+ G + AR FDRM +NVVSWN ++A YV+ E ++LF
Sbjct: 236 VSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYK 295
Query: 342 -------MIRGDAKPNE----------------ASLMSVLTACANMGVIDIGQWIHSYIQ 378
MI G + + A+ ++++ G ID + S +
Sbjct: 296 DCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLN 355
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K D + S++ Y + G M A N+F M KN VSWN+MI GY G+ ++A E
Sbjct: 356 ----KRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATE 411
Query: 439 MFMEMEKR-------------------------------GPTPNDATFICVLSACTH 464
+F M R G P+ +TF C LS+C +
Sbjct: 412 IFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCAN 468
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 188/425 (44%), Gaps = 84/425 (19%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
++F +N I G++ +A++VF + + T+NSM+ + KN V AR+LFD M
Sbjct: 16 NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+R++ +WN+MI+GY+ +E A+ LFDLM RD SW MI Y + G + AR F+
Sbjct: 76 QRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFEL 135
Query: 311 MCMR-NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
+ + + WN ++A Y + + + ++F++M P +
Sbjct: 136 VPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKM------PVK------------------ 171
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
D++ S+L Y + G M LA F+ M E+NVVSWN M+ G+
Sbjct: 172 ---------------DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVN 216
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ---------- 479
+ A E+F ++ P PN +++ +L G ++E FD M
Sbjct: 217 NCDLGSAWELFEKI----PDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAM 272
Query: 480 --------------RIYKIEPKVE--HYGCMVDLLGRAGLMRDSEELVSKLP---MEAGP 520
+++K P + + M++ R G + ++ E+ +++P + A
Sbjct: 273 IAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKT 332
Query: 521 ALWGALLSACSTHSNSELGKI--VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
AL L+ + G+I +Q +L RD + + Y G+ E NL R
Sbjct: 333 ALMSGLI---------QNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFR 383
Query: 579 IMKEK 583
M K
Sbjct: 384 QMPVK 388
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 169/370 (45%), Gaps = 24/370 (6%)
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
+++F N I G ++ A +F + ++ ++N M+ +AK G V+ AR FD+M
Sbjct: 15 KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM 74
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
RN+VSWN ++A Y+ E +LFD M A+ + S ++T G+++ +
Sbjct: 75 SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLM----AERDNFSWALMITCYTRKGMLEKAR 130
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+ + K D +++ YAK G D A VF+ M K++VS+NSM+ GY +G
Sbjct: 131 ELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNG 187
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
+ A++ F M +R + ++ C L W +L ++I +P +
Sbjct: 188 KMGLAMKFFERMAERNVVSWNLMVAGFVNNCD-----LGSAW--ELFEKI--PDPNAVSW 238
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
M+ R G + ++ +L ++P + W A+++A +L A L + P
Sbjct: 239 VTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAMIAAYV----QDLQIDEAVKLFKETP 293
Query: 552 -RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL--EKAVGSSLVHPGEFASESIVENC 608
+D + + N Y GK DE + M K++ + A+ S L+ G S V +
Sbjct: 294 YKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQ 353
Query: 609 PPHRKCIVYS 618
R I ++
Sbjct: 354 LNKRDAICWN 363
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 20/184 (10%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ TF CA + +L+ GK++H I+K G+ DLFV N+LI MY+ CG V A KVF
Sbjct: 455 DQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVF 514
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVG 268
+D DL++WNS+I GY N G+A E F + D T+ M+S G
Sbjct: 515 KDIEGVDLISWNSLISGYALN---GYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAG 571
Query: 269 DMEAANGLFDLM-------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWN 320
LF M P + ++C++D ++G + A N M ++ N W
Sbjct: 572 LTNQGVDLFKCMIEGFAIEPLAE--HYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWG 629
Query: 321 ILLA 324
LLA
Sbjct: 630 SLLA 633
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 273/504 (54%), Gaps = 79/504 (15%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ C + +L EG+ +H +VK G + V++ L+ MYS CG +A + F + D++
Sbjct: 246 QACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDII 305
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPER-------------------------------- 252
+W SMI Y + +G+A E D E
Sbjct: 306 SWTSMISAYSR---MGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFH 362
Query: 253 ----------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG-------- 294
D N+++S Y G ++ A F + ++ +WN M+ G
Sbjct: 363 GLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLAR 422
Query: 295 ------------------------YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
Y K GN+T AR F R+ R++V+WN L++ Y C
Sbjct: 423 SIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRI-PRDIVTWNTLISSYAHCG 481
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
+ E L L+D+M+ D KPN A+L+SVL+AC+++ ++ G+ +H+YI + + ++ ++T
Sbjct: 482 HFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIAT 541
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
+L+ MYAKCG ++ +R +F++M E++V++WN MI GYGMHG A+E F +ME+ P
Sbjct: 542 ALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKP 601
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
N TF+ VLSAC HAG+V EG + F MQ Y + P ++HY CMVDLLGR+G ++++E L
Sbjct: 602 NGLTFLAVLSACAHAGLVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEAL 660
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
V +P+ +WGALLS+C H+ E+G +A+H ++ + + G YV++SN+Y+S GKW
Sbjct: 661 VLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKW 720
Query: 571 DEVENLRRIMKEKELEKAVGSSLV 594
+E E R IMKE+ + K G S V
Sbjct: 721 EEAEKARGIMKERGVRKKTGWSAV 744
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 20/376 (5%)
Query: 68 STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
S++K Q H ++ SG S + F AS+++ L S S S FD I DAF+ N+I
Sbjct: 46 SSLKTLLQSHAFIITSGYSNNIFIASKLIS-LYASFHKPSCSTELFDEIPHRDAFLWNSI 104
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+K+ + AL FY + M A NH+T P++ CA + + G+ +H + K G
Sbjct: 105 IKAHFSNGEYSRALDFY-QWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLG 163
Query: 188 -FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
F V +S ++MYS CG + +A VF++ D+V W +++ G V+N E E
Sbjct: 164 LFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECL 223
Query: 247 DFM------PERDIFTWNSMISGYVDVGDMEA------ANGLF--DLMPFRDVVSWNCMI 292
M ER F ++ G+ G++ A +GL M + VV + ++
Sbjct: 224 CEMHRIGGDGERPNF--RTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQ-SLLL 280
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
Y+K GN A F + ++++SW +++ Y R EC+ +F M+ P+
Sbjct: 281 SMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGI 340
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +L++ +N + + H I + D ++ +LL+MY K G + LA F +
Sbjct: 341 VISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRV 400
Query: 413 TEKNVVSWNSMIMGYG 428
E+N +WN M+ GYG
Sbjct: 401 NEQNFEAWNLMVSGYG 416
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 215/468 (45%), Gaps = 27/468 (5%)
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
I SL+ + HA I+ G+ ++F+ + LI +Y+ + + ++F++ P D WNS+
Sbjct: 45 ISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSI 104
Query: 230 IDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
I + N E A + + +M + FT +++ ++ + + L+ +
Sbjct: 105 IKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGL 164
Query: 286 VSWNCMIDG-----YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR---CKDYCECLR 337
S + + Y+K G + A FD + R+VV+W L+ V+ K ECL
Sbjct: 165 FSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLC 224
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
R+ +PN +L AC N+G + G+ +H + K + ++ + LL+MY+
Sbjct: 225 EMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYS 284
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG + A F + K+++SW SMI Y G + ++MF EM G P+ C
Sbjct: 285 KCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISC 344
Query: 458 VLSACTHAGMVLEGWWYFDL-MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+LS+ +++ V E + L ++R Y ++ V++ ++ + + G ++ +E+ ++
Sbjct: 345 MLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQN--ALLSMYCKFGFLKLAEKFFGRVNE 402
Query: 517 EAGPALWGALLSA-CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+ A W ++S +TH + + ++LM+ + L ++Y G
Sbjct: 403 QNFEA-WNLMVSGYGATHLARSIHCYMIKNLMD---ENVSVNNSLIDMYGKSGNLTIARR 458
Query: 576 LR-RIMKEKELEKAVGSSLVHPGEFAS------ESIVENCPPHRKCIV 616
+ RI ++ + SS H G FA + ++E+ P+ +V
Sbjct: 459 IFCRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLV 506
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 177/393 (45%), Gaps = 24/393 (6%)
Query: 79 QLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPF 138
++LVSG+ D S +L S+ V + F I + + + L + F
Sbjct: 329 EMLVSGIYPDGIVISCMLSSFSNSMR-VFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKF 387
Query: 139 GALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSL 198
G L EK + E N + L+ +G + + +H ++K + ++ V NSL
Sbjct: 388 GFLKLA-EKFFGRVNEQNFEAWNLM---VSGYGATHLARSIHCYMIKNLMDENVSVNNSL 443
Query: 199 IHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI---- 254
I MY G + AR++F P D+VTWN++I Y A L+D M D+
Sbjct: 444 IDMYGKSGNLTIARRIFCRIPR-DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNS 502
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLM-----PFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
T S++S + +E + + + F ++ +ID YAK G + +R F+
Sbjct: 503 ATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIA-TALIDMYAKCGQLEKSREIFN 561
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
M R+V++WN++++ Y D + F +M AKPN + ++VL+ACA+ G++
Sbjct: 562 SMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKE 621
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYG 428
G+++ +Q + P++ ++ + + G + A + +M + W +++
Sbjct: 622 GKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCK 681
Query: 429 MHGQGEKALEMFMEMEKRG---PTPNDATFICV 458
+H + +EM + + K ND ++ +
Sbjct: 682 IHNE----IEMGIRIAKHAIDSDVENDGYYVMI 710
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 267/448 (59%), Gaps = 3/448 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I + V +A+++F P D+++W +M+ G KN + AR LFD MP R++
Sbjct: 195 NTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVV 254
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MI GY ++ A LF+ MP R++ SWN MI G+ + G + A + F +M +N
Sbjct: 255 SWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKN 314
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
VV+W +++ +V+ E L++F M + KPNE + +SVL AC+ + + GQ IH
Sbjct: 315 VVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIH 374
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQ 432
I K + + ++L+ MY+KCG ++LAR +FD+ + ++VVSWN MI Y HG
Sbjct: 375 QIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGH 434
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G KA+ +F EM+ G P++ T+I +LSAC+HAG+V EG F+ + R I+ + +H+
Sbjct: 435 GHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFT 494
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VDL GRAG ++++ + + L ++ ++W ALL+ C+ H + +LGK+ A+ L+E EP
Sbjct: 495 CLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPE 554
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+ G Y++LSNIYAS GKW E +R MK+K L+K G S + G +V +
Sbjct: 555 NAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHRE 614
Query: 613 KCIVYSMLGEIGAQMKMCRRDVASQISI 640
+Y +L ++ +MK + ++I
Sbjct: 615 FENIYLLLHDLHTKMKKIGHTLYEDLTI 642
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 210/424 (49%), Gaps = 52/424 (12%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-RDI 254
N LI G++ +AR+VFE+ P D+V+W ++I GY+K + A+ LFD +++
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
TW +++SGYV +E A LFD MP ++V+SWN MI+GYA+ G + A + F+ M R
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPER 189
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID------ 368
NVVSWN ++ +++ + E LF+RM D S +++ + G ID
Sbjct: 190 NVVSWNTVITAFMQRRRVDEAQELFNRMPERDV----ISWTTMVAGLSKNGRIDDARLLF 245
Query: 369 -------IGQW---IHSYIQKCRIK---------PDVLLST--SLLTMYAKCGVMDLARN 407
+ W I Y Q R+ P+ LS+ +++T + + G ++ A +
Sbjct: 246 DKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVD 305
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAG 466
F M+ KNVV+W ++I G+ G+ E+AL++F EM+ PN+ TF+ VL AC+
Sbjct: 306 FFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLA 365
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEH------YGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
+ EG Q+I++I K + ++++ + G + + ++ +
Sbjct: 366 ALCEG-------QQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRD 418
Query: 521 AL-WGALLSACSTHSNSELGKIVAQHLMELEPR-DPGPYVLLSNIYASEGKWDE----VE 574
+ W +++A + H + + + L R D Y+ L + + G DE E
Sbjct: 419 VVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFE 478
Query: 575 NLRR 578
NL R
Sbjct: 479 NLVR 482
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+V FF + + ++ + AL + E A V+ N TF + C+
Sbjct: 303 AVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACS 362
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW--DLVTW 226
+ +L EG+++H I K ++ V ++LI+MYS CGE+ ARK+F+DG + D+V+W
Sbjct: 363 KLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSW 422
Query: 227 NSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFD-LMP 281
N MI Y + A LFD M D T+ +++S G ++ LF+ L+
Sbjct: 423 NGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVR 482
Query: 282 FRDVV----SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS-WNILLA 324
R + + C++D + + G + A + + ++ S W LLA
Sbjct: 483 DRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLA 530
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
I S ++ +V S L+T K G + AR VF+ M +++VVSW ++I GY G
Sbjct: 53 ISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGM 112
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
E+A +F ++ N T+ ++S + E FD M V +
Sbjct: 113 IEEAKTLF---DRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMP-----VKNVISWN 164
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
M++ R G + + +L +P E W +++A
Sbjct: 165 TMIEGYARKGWIDQALDLFEXMP-ERNVVSWNTVITA 200
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/489 (35%), Positives = 265/489 (54%), Gaps = 52/489 (10%)
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
P+L K C I L KK+HA IVK F+ ++ + + GE A +F+
Sbjct: 19 PIL-KDCPNIVEL---KKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVAD 74
Query: 221 WDLVTWNSMIDGYVKNREVGFA-------------------------------------- 242
+ +N+MI Y N+ A
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 243 ------RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
+F F + + NS++ YV ++ A+ +F+ M RD VSWN +I G+
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHV 194
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
++G + AR F+ M + + SW +++ Y R Y + L F RM +P+E SL+S
Sbjct: 195 RLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVS 254
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL CA +G +++G+WIH Y K ++ + +L+ MYAKCG +D R +FD M E++
Sbjct: 255 VLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERD 314
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
V+SW++MI+G HG+ +A+E+F EM+K P+ TF+ +L+AC HAG++ EG YF+
Sbjct: 315 VISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFE 374
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+R Y IEP VEHYGC+V+LLG +G + + ELV K+P + +WG+LLS+C +H N
Sbjct: 375 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNL 434
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
++ I +HL+ELEP D G YVLLSN+YA GKWD V +R++M+ K ++K G S +
Sbjct: 435 KIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEV 494
Query: 597 G----EFAS 601
EFAS
Sbjct: 495 DNMVQEFAS 503
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 206/438 (47%), Gaps = 52/438 (11%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
D+ PIL+ C + E +IH ++ LSQ SF ++++ +C + L F
Sbjct: 15 DMFVPILK---DCPNIVELKKIHAHIVKFSLSQSSFLVTKMVD-VCNHYGETEYANLLFK 70
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH----NHYTFPLLGKVCAGI 170
G+ +P+AF+ N +++++ A++ Y + + E+ + +TFP + K CAG+
Sbjct: 71 GVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGL 130
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
GK+VH + K G + + V NSL+ MY C + DA +VFE+ D V+WN++I
Sbjct: 131 MCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLI 190
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP--------- 281
G+V+ ++ AR +F+ M ++ IF+W +++SGY +G A F M
Sbjct: 191 SGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEI 250
Query: 282 ------------------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R++ N +I+ YAK G++ R FD+M
Sbjct: 251 SLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQM 310
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
R+V+SW+ ++ E + LF M + +P+ + + +LTACA+ G+++ G
Sbjct: 311 KERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGL 370
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGM 429
++ S + I+P V L+ + G +D A + M K + W S++
Sbjct: 371 RYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRS 430
Query: 430 HGQ---GEKALEMFMEME 444
HG A+E +E+E
Sbjct: 431 HGNLKIAVIAMEHLLELE 448
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 301/551 (54%), Gaps = 27/551 (4%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQD-SFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMC 124
S ++++ IH + +V G+S + +FA S + + +S++ + FD DA+M
Sbjct: 25 SPASLRALLPIHARAIVLGVSANLAFATSLIAG---AAPASLAYARRVFDAAPVRDAYMW 81
Query: 125 NTIMKSFLMLNDP--------FGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
NT++++ + AL+ Y ++M A V +HYT+P++ CA R R G
Sbjct: 82 NTLLRAHAHSHSHSQSSHSHAVDALALY-KRMRAAGVAPDHYTYPIVLPACAAARQPRLG 140
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED--GPVWDLVTWNSMIDGYV 234
+ VH V+ + D FVR +LI MY GEV DA VF + G +V+W +M+ GYV
Sbjct: 141 RAVHGDAVRFALDGDGFVRCTLIAMYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYV 200
Query: 235 KNREVGFARELFDFM-------PERDIFTWNSMISG--YVDVGDMEAANGLFDLMPF-RD 284
+N G A LF M E + ++ + G ++D G+M +G F +
Sbjct: 201 QNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEWLDAGEM--VHGFVIRSGFDAN 258
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+ N +I Y K G++ A F+ M +R++VSWN ++A+Y + D E ++ F RM+
Sbjct: 259 IPLANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLT 318
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ +L+SVL+AC G ++ G+W+H + + + D + L+ MYAKCG +
Sbjct: 319 EKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIAD 378
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR VFD + + VVSW++MI Y HG E+AL++F M+ G PN TF VL AC H
Sbjct: 379 ARKVFDCLHVRGVVSWSAMISAYANHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGH 438
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
+G+V EG +F+ + Y++ P +EHY C+VD+LGRAG + ++ E++ + + +WG
Sbjct: 439 SGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCVWG 498
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
A L C HSN EL + VA+ L + D YVL+SN+Y G ++ E +RR MKE E
Sbjct: 499 AFLGGCKLHSNLELAEFVAKDLFQSGSNDVTFYVLMSNMYFEAGMLEDAERIRRAMKEME 558
Query: 585 LEKAVGSSLVH 595
L+K G S V+
Sbjct: 559 LKKTAGHSAVN 569
>gi|356518597|ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Glycine max]
Length = 535
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/472 (37%), Positives = 271/472 (57%), Gaps = 43/472 (9%)
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
PLL K CA + L K +HA +K G E D+ + +L+ YS CG V DAR +F+ P
Sbjct: 50 PLLFKACASLPFLHYVKALHAESIKAGSESDVIIGTALLTTYSKCGVVRDARNLFDTMPE 109
Query: 221 WDLVTWNSMIDGYVKNREV-----------------------GFAR--------ELFDFM 249
++VTWN+MI GY++N + GFAR LFD +
Sbjct: 110 RNVVTWNAMISGYLRNGDTESAYLVFEKMQGKTQVTWSQMIGGFARNGDIATARRLFDEV 169
Query: 250 PE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
P +++ TW M+ GY +G+MEAA +F++MP R+ W+ MI GY K GNVT A
Sbjct: 170 PHELKNVVTWTVMVDGYARIGEMEAAREVFEMMPERNCFVWSSMIHGYFKKGNVTEAAAV 229
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD + +RN+ WN ++A YV+ + L F+ M +P+E +++SVL+ACA +G +
Sbjct: 230 FDWVPVRNLEIWNSMIAGYVQNGFGEKALLAFEGMGAEGFEPDEFTVVSVLSACAQLGHL 289
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D+G+ IH I+ I + + + L+ MYAKCG + AR VF+ TEKN+ WN+MI G+
Sbjct: 290 DVGKQIHHMIEHKGIVVNPFVLSGLVDMYAKCGDLVNARLVFEGFTEKNIFCWNAMISGF 349
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
++G+ + LE F ME+ P+ TF+ VLSAC H G+V E M+ Y+IE
Sbjct: 350 AINGKCSEVLEFFGRMEESNIRPDGITFLTVLSACAHRGLVTEALEVISKMEG-YRIEIG 408
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
++HYGCMVDLLGRAG ++D+ +L+ ++PM+ + GA+L AC HS+ + A+ +M
Sbjct: 409 IKHYGCMVDLLGRAGRLKDAYDLIVRMPMKPNDTVLGAMLGACRIHSDMNM----AEQVM 464
Query: 548 ELEPRDP-----GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+L +P VLLSNIYA+ KW++ E ++RI + ++ G S +
Sbjct: 465 KLICEEPVTGASSHNVLLSNIYAASEKWEKAERMKRITVDGGSQRIPGCSSI 516
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
C L + R + + + + ACA++ + + +H+ K + DV++ T+LLT
Sbjct: 30 CALLAYKQTRHEGVYDSSVAPLLFKACASLPFLHYVKALHAESIKAGSESDVIIGTALLT 89
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
Y+KCGV+ ARN+FD M E+NVV+WN+MI GY +G E A +F +M+ + T
Sbjct: 90 TYSKCGVVRDARNLFDTMPERNVVTWNAMISGYLRNGDTESAYLVFEKMQGK----TQVT 145
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+ ++ G + FD + K V + MVD R G M + E+ +
Sbjct: 146 WSQMIGGFARNGDIATARRLFDEVPHELK---NVVTWTVMVDGYARIGEMEAAREVFEMM 202
Query: 515 PMEAGPALWGALL 527
P E +W +++
Sbjct: 203 P-ERNCFVWSSMI 214
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY-YEKMMAKFVEHNHYTFPL 162
+V+ + FD + + + N+++ ++ + FG + +E M A+ E + +T
Sbjct: 221 GNVTEAAAVFDWVPVRNLEIWNSMIAGYV--QNGFGEKALLAFEGMGAEGFEPDEFTVVS 278
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ CA + L GK++H I G ++ FV + L+ MY+ CG++++AR VFE +
Sbjct: 279 VLSACAQLGHLDVGKQIHHMIEHKGIVVNPFVLSGLVDMYAKCGDLVNARLVFEGFTEKN 338
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDM-EAANGLF 277
+ WN+MI G+ N + E F M E +I T+ +++S G + EA +
Sbjct: 339 IFCWNAMISGFAINGKCSEVLEFFGRMEESNIRPDGITFLTVLSACAHRGLVTEALEVIS 398
Query: 278 DLMPFR---DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
+ +R + + CM+D + G + A + RM M+
Sbjct: 399 KMEGYRIEIGIKHYGCMVDLLGRAGRLKDAYDLIVRMPMK 438
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/651 (30%), Positives = 328/651 (50%), Gaps = 80/651 (12%)
Query: 57 SHPILQKLESCS---TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
S P + L C+ + ++ ++H ++ S + ++F +R++ + V ++ F
Sbjct: 19 SSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLID-VYGKCGCVDVARKLF 77
Query: 114 DGIQEPDAFMCNTIMKSFL---MLNDP---------------------------FGALSF 143
D + E + F N+I+ +F L+D F
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y+ +M N Y+F CAG++ L+ G ++H+ + + + D+++ ++L+ MYS
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PER----- 252
CG V A+ VF++ V V+WNS+I Y +N V A ++F M P+
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
Query: 253 -----------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
D+ N+++ Y + A +FD+MP R
Sbjct: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
VVS M+ GYAK V AR F M +++V++WN L+A + + E L LF +
Sbjct: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLK 377
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMYA 397
R P + ++L ACAN+ + +G+ HS++ K + DV + SL+ MY
Sbjct: 378 RESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYM 437
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG ++ VF +M EK+ VSWN+MI+GY +G G KALE+F +M + G P+ T I
Sbjct: 438 KCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIG 497
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
VL AC+HAG++ EG +YF M + + P +HY CMVDLLGRAG + +++ L+ ++ M+
Sbjct: 498 VLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQ 557
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
+WG+LL+AC H N +LG+ V + L+E++P + GPYVLLSN+YA W V +R
Sbjct: 558 PDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVR 617
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
++M+++ + K G S + + +V++ RK +Y +L I QMK
Sbjct: 618 KLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMK 668
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 265/509 (52%), Gaps = 40/509 (7%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+ L + C R L++GKKVH I GF LF+ N L+ MY+ C ++D++K+F++ P
Sbjct: 73 YSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMP 132
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
DL +WN +I GY K + A+ LFD MPERD F+W +MISGYV A LF +
Sbjct: 133 ERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRM 192
Query: 280 MPFRD----------------------------------------VVSWNCMIDGYAKIG 299
M D V W+ + D Y K G
Sbjct: 193 MKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCG 252
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
++ AR+ FD+M R++V+W ++ Y + E LF ++R +PNE + VL
Sbjct: 253 SIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLN 312
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACAN ++G+ +H Y+ + P +++L+ MY+KCG M A VF + ++ S
Sbjct: 313 ACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFS 372
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W S+I GY +GQ ++A+ F + K G P+ TF+ VLSAC HAG+V +G YF ++
Sbjct: 373 WTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIK 432
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y + +HY C++DLL R+G ++E ++SK+ M+ LW +LL C H N +L
Sbjct: 433 EQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLA 492
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
+ A+ L E+EP +P YV L+NIYA+ G W EV +R+ M ++ + K G S +
Sbjct: 493 QRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRD 552
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+V + + + LG++ +MK
Sbjct: 553 VHVFLVGDDSHPKSKEINEFLGKLSKRMK 581
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 27/374 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D F ++ ++ + P AL + + + N +T A +
Sbjct: 158 LFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVP 217
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
LR GK++H I++ G + D V ++L MY CG + +AR +F+ D+VTW +MID
Sbjct: 218 CLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMID 277
Query: 232 GYVKNREVGFARELFDFMPE-------RDIFTWNSMISGYVDVGDMEAANGLFDLM---- 280
Y ++ G +E FD + + FT++ +++ + E + M
Sbjct: 278 RYFQD---GRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVG 334
Query: 281 --PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
PF S ++ Y+K GN+ SA F ++ SW L+A Y + E +R
Sbjct: 335 FDPFSFAAS--ALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRY 392
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYA 397
F+ +++ +P+ + + VL+ACA+ G++D G + HS ++ + ++ + A
Sbjct: 393 FELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLA 452
Query: 398 KCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDA 453
+ G D A N+ M+ K + W S++ G +HG ++A E E+E P A
Sbjct: 453 RSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENP----A 508
Query: 454 TFICVLSACTHAGM 467
T++ + + AGM
Sbjct: 509 TYVTLANIYATAGM 522
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH ++ +GL D S L + S+ + FD + + D ++ +
Sbjct: 224 EIHGYIMRTGLDSDEVVWS-ALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQD 282
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ + ++ + N +TF + CA S GKKVH + + GF+ F
Sbjct: 283 GRRKEGFDLFAD-LLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFA 341
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----P 250
++L+HMYS CG ++ A +VF++ P DL +W S+I GY +N + A F+ +
Sbjct: 342 ASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT 401
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS-----WNCMIDGYAKIGNVTSAR 305
+ D T+ ++S G ++ F + + ++ + C+ID A+ G A
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAE 461
Query: 306 NCFDRMCMR 314
N +M M+
Sbjct: 462 NIISKMSMK 470
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP+ + +++ +C ++ G+ +H +I+ P + + LL MYAKC + ++
Sbjct: 67 KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+FD M E+++ SWN +I GY G ++A +F +M P ++ ++ ++S
Sbjct: 127 LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKM----PERDNFSWTAMISGYVRHDR 182
Query: 468 VLEGWWYFDLMQR 480
E F +M+R
Sbjct: 183 PNEALELFRMMKR 195
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 305/570 (53%), Gaps = 19/570 (3%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPI--LQKLESCS-TVKEFHQIHTQLLVSGLSQDSFAASRV 95
P F + + P + HP+ L L +CS T K QIH+QL+ + L F + +
Sbjct: 12 PNLSFFKSHYHQTPFL---HPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNL 68
Query: 96 LKKLCTSLSSVSLSVLFFDGIQEPDAFMCN--TIMKSFLMLNDPFGALSFYYEKMMAKFV 153
L L SV ++L F + + + +++ PF AL+F+ M V
Sbjct: 69 LN-LYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFF-NHMRRSGV 126
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
NHYTF + C + G+++H+ + K GF ++FV ++L+ MY+ C ++L A K
Sbjct: 127 YPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEK 186
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVG-----FARELFDFMPERDIFTWNSMISGYVDVG 268
VFE+ PV +LV+WN+MI G+++N+ F L + + D +++S+ S + G
Sbjct: 187 VFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAG 246
Query: 269 DMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
++E + L + V N + D Y K G F R+VV+WNI++
Sbjct: 247 NLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIM 306
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
YV +Y + F M R + P+EAS SVL +CAN+ + G IH+ I +
Sbjct: 307 AYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVK 366
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
++ +++SL+TMYAKCG + A +F+ ++NVV W ++I HG +E+F +M
Sbjct: 367 NLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQML 426
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
+ G P+ TF+ VLSAC+H G V EG++YF+ M +++ I P EHY C+VDLL RAG +
Sbjct: 427 REGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGEL 486
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ + +P++ ++WGALLSAC HSN +GK VA L +LEP +PG YVLL NI
Sbjct: 487 DRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNIL 546
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G +E + +RR M+ + K G S +
Sbjct: 547 TRNGMLNEADEVRRKMESIGVRKEPGCSWI 576
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 267/469 (56%), Gaps = 46/469 (9%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYS--VCGEVLDARKVFEDGPVWDLVTWNS 228
R +++ K+ HA+++ CG D F + L+ S + G + A K+F+ + N+
Sbjct: 16 RHMKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNT 75
Query: 229 MIDGYVKNREVGFARELFDFMPER------------------------------------ 252
MI +V ++ +++ M E
Sbjct: 76 MIKAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLG 135
Query: 253 ---DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
DIF N++I+ Y G++ AA +FD MP+ VSW MI GYAK+G+V +AR FD
Sbjct: 136 FWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFD 195
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
M++ W +++ YV+ + E L++F M +P+EA L+S+L ACA++G ++I
Sbjct: 196 EAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEI 255
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G W+H Y+ + V LST L+ MYAKCG +D+A+ +FD M++++ + WN+MI G M
Sbjct: 256 GVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMAM 315
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
+G G+ AL +F EMEK G P+D TFI + +AC+++GM E + M +Y +EPK E
Sbjct: 316 NGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSE 375
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA----LWGALLSACSTHSNSELGKIVAQH 545
HYGC+VDLLGRAGL+++++EL+ K+P + P W ALLSAC +H +E+ + AQ
Sbjct: 376 HYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAEDAAQR 435
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L LE G YVLLSN+YA+ GK D V +R++M+ + ++KA G S V
Sbjct: 436 LFHLE-HHSGAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSV 483
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 195/418 (46%), Gaps = 47/418 (11%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFM 123
E C +K+ + H Q+L GL DSFA SR+L L S+ + F IQ P +
Sbjct: 13 EKCRHMKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICI 72
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CNT++K+F++ + Y +M+ + ++YT P + K CAG++S G+ H +
Sbjct: 73 CNTMIKAFVLKGKLINTIQIY-SQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQS 131
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
VK GF D+FV N+LI MYS G V AR +F++ P V+W MI GY K +V AR
Sbjct: 132 VKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETAR 191
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD-------VVSWNC------ 290
LFD P +D W S+ISGYV + +F LM +VS C
Sbjct: 192 MLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLG 251
Query: 291 --------------------------MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ID YAK G++ A+ FD M R+ + WN +++
Sbjct: 252 AMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMIS 311
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI-DIGQWIHSYIQKCRIK 383
D LRLF M + KP++ + +++ TAC+ G+ + + ++S ++
Sbjct: 312 GMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNME 371
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTE-----KNVVSWNSMIMGYGMHGQGEKA 436
P ++ + + G++ A+ + M + ++W +++ HGQ E A
Sbjct: 372 PKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVA 429
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 278/485 (57%), Gaps = 40/485 (8%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M K V + T+ CA + SL GK++H ++++ +D +V ++++ +Y+ CG
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------------------ 249
+A++VF + V+W +I G+++ + ELF+ M
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401
Query: 250 ---------------------PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
R + NS+IS Y G+++ A +F+ M RD+VSW
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF-DRMIRGDA 347
MI Y+++GN+ AR FD M RNV++WN +L Y++ + L+++ D + D
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
P+ + +++ CA++G +G I + K + D + +++TMY+KCG + AR
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARK 581
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
FD ++ K++VSWN+MI GY HG G++A+E+F ++ +G P+ +++ VLS C+H+G+
Sbjct: 582 AFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGL 641
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG +YFD+M+R + I P +EH+ CMVDLLGRAG + +++ L+ ++PM+ +WGALL
Sbjct: 642 VEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALL 701
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SAC TH N++L ++ A+HL +L+ G Y+LL+ +YA GK D+ +R++M++K ++K
Sbjct: 702 SACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKK 761
Query: 588 AVGSS 592
+ G S
Sbjct: 762 SPGYS 766
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 185/433 (42%), Gaps = 43/433 (9%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
+V L + +L SC + + LL +++ + ++ L S+S +V
Sbjct: 59 VVFLQNTLLHAYLSCGALSDARN----LLRDEITEPNVITHNIMMNGYAKLGSLSDAVEL 114
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F + D NTIM + AL + N +TF + K C +
Sbjct: 115 FGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGW 174
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
++ + K + D V+ +L+ M CG + A K F ++ NSM+ G
Sbjct: 175 HEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVG 234
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-EAANGLFDL------------ 279
Y K+ V A E+F MPERD+ +WN +IS G + EA + + D+
Sbjct: 235 YAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTY 294
Query: 280 --------------------------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+P D + M++ YAK G A+ F +
Sbjct: 295 TSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRD 354
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RN VSW +L+ +++ + E + LF++M ++ +L ++++ C N I +G +
Sbjct: 355 RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
HS K V++S SL++MYAKCG + A +F+ M E+++VSW MI Y G
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474
Query: 434 EKALEMFMEMEKR 446
KA E F +M R
Sbjct: 475 AKAREFFDDMSTR 487
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 181/404 (44%), Gaps = 44/404 (10%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H Q++ + D + AS +++ L + F +++ ++ ++ FL
Sbjct: 312 QLHVQVIRNLPHIDPYVASAMVE-LYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQY 370
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
F + +M A+ + + + L C + G ++H+ +K G + V
Sbjct: 371 G-CFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVV 429
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
NSLI MY+ CG + +A +F D+V+W MI Y + + ARE FD M R++
Sbjct: 430 SNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNV 489
Query: 255 FTWNSMISGYVDVGDMEAANGLF-DLMPFRDVV-SW------------------------ 288
TWN+M+ Y+ G E ++ D++ +DV+ W
Sbjct: 490 ITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIG 549
Query: 289 --------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
N +I Y+K G ++ AR FD + +++VSWN ++ Y + +
Sbjct: 550 HTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQ 609
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLL 393
+ +FD ++ AKP+ S ++VL+ C++ G+++ G++ +++ I P + + ++
Sbjct: 610 AIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMV 669
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMGYGMHGQGEKA 436
+ + G + A+N+ D M K W +++ HG + A
Sbjct: 670 DLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLA 713
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 166/361 (45%), Gaps = 52/361 (14%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ C +L + +H+R++ G +F++N+L+H Y CG + DAR + D
Sbjct: 33 RSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE------ 86
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
+ E ++ T N M++GY +G + A LF MP RD
Sbjct: 87 ------------------------ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRD 122
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRM-----CMRNVVSWNILLALYVRCKDYCECLRLF 339
V SWN ++ GY + G +A + F M + N ++ ++ + L+L
Sbjct: 123 VASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLL 182
Query: 340 DRMIRGDAKPN---EASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSLLTM 395
+ + D++ + + +L+ +L C G +D Q RIK P ++ S+L
Sbjct: 183 GLLSKFDSQDDPDVQTALVDMLVRC---GAMDFAS-----KQFSRIKNPTIICRNSMLVG 234
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAK +D A +F +M E++VVSWN +I G+ +AL+M ++M +G P+ T+
Sbjct: 235 YAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTY 294
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSK 513
L+AC LE W L ++ + P ++ Y MV+L + G ++++ + S
Sbjct: 295 TSSLTACARLS-SLE--WGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSS 351
Query: 514 L 514
L
Sbjct: 352 L 352
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF-DN 411
+L L +C + + +HS + + V L +LL Y CG + ARN+ D
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+TE NV++ N M+ GY G A+E+F M PT + A++ ++S +G L
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRM----PTRDVASWNTIMSGYYQSGQFLNA 142
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE---LVSKLPMEAGPALWGALL 527
F M++ P +GC++ G G + + L+SK + P + AL+
Sbjct: 143 LDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV 201
>gi|354805142|gb|AER41563.1| CRR4 [Oryza australiensis]
Length = 599
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 272/511 (53%), Gaps = 70/511 (13%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC------- 205
V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y C
Sbjct: 105 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGGDVFVQNALMDVYYRCGGAGGVG 164
Query: 206 ---------------------------GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
G+ A +FE P ++V+WN+++ G+ + +
Sbjct: 165 AARQVFDQMVEKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNTVVAGFARAGD 224
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ AR +FD MP R+ +WN MISGY GD+EAA+ +FD M +DVVSW M+ YAKI
Sbjct: 225 MVTARTVFDRMPSRNAVSWNLMISGYATSGDVEAAHSVFDRMDQKDVVSWTAMVSAYAKI 284
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD-RMIRGDAKPNEASLMSV 357
G++ +A+ FD M ++N+VSWN ++ Y Y E LR F M+ G +P+EA+L+SV
Sbjct: 285 GDLDNAKQLFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSV 344
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
++ACA +G ++ WI S+I K +I V L +L+ M+AKCG + A++ F M + +
Sbjct: 345 VSACAQLGSVEYCNWIGSFIGKSKIHLTVALGNALIDMFAKCGDVGRAQSFFYEMKTRCI 404
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
++W +MI G+ +G +AL ++ M + G +D FI L+AC H G++ EGW F+
Sbjct: 405 ITWTTMISGFAFNGFCREALLVYNNMCREGIELDDTVFIAALAACAHGGLLQEGWSIFNE 464
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M + Y I+P++EHYGCMVDLLGRA E
Sbjct: 465 MVKQYNIQPRMEHYGCMVDLLGRA-----------------------------------E 489
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
L + V+ + +LEP +P VL+SN A EG+WD V R M+ +EK GSSL+ G
Sbjct: 490 LIEYVSNKITKLEPFNPSYQVLVSNCSALEGRWDGVIGARTSMRNWGIEKVPGSSLIQVG 549
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E + ++ RK +Y + + A M+
Sbjct: 550 SEVHEFLAKDTRHERKKEIYETVDGLMALMR 580
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 269/446 (60%), Gaps = 14/446 (3%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
+ L K C + + +G+ VHA +V F + L ++N +++MY+ CG + DAR++F++
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELF------DFMPERDIFTWNSMISGYVDVGDMEA 272
P D+VTW ++I G+ +N A LF F P FT +S++ ++
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNH--FTLSSLLKASGSEHGLDP 207
Query: 273 ANGLFDL-MPF---RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
L + + V + ++D YA+ G++ +A+ FD M ++ VSWN L++ + R
Sbjct: 208 GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
+ L L +M R + +P + SVL+ACA++G ++ G+W+H+++ K +K +
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFI 327
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+LL MYAK G +D A+ VFD + + +VVSWN+M+ G HG G++ L+ F +M + G
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
PN+ +F+CVL+AC+H+G++ EG +YF+LM++ YK+EP V HY VDLLGR GL+ +E
Sbjct: 388 EPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAE 446
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+ ++P+E A+WGALL AC H N ELG A+ EL+P D GP +LLSNIYAS G
Sbjct: 447 RFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAG 506
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLV 594
+W +V +R++MKE ++K S V
Sbjct: 507 RWRDVAKVRKMMKESGVKKQPACSWV 532
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 192/414 (46%), Gaps = 17/414 (4%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
+P +L +L++ V++ +H L+ S + ++ + + +
Sbjct: 84 VPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDAR 143
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD + D ++ F N P AL + +M+ + NH+T L K
Sbjct: 144 RMFDEMPTKDMVTWTALIAGFSQNNRPRDAL-LLFPQMLRLGFQPNHFTLSSLLKASGSE 202
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
L G ++HA +K G++ ++V ++L+ MY+ CG + A+ F+ P V+WN++I
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 231 DGYVKNREVGFARELF------DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM--PF 282
G+ + E A L +F P FT++S++S +G +E + M
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTH--FTYSSVLSACASIGALEQGKWVHAHMIKSG 320
Query: 283 RDVVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
++++ N ++D YAK G++ A+ FDR+ +VVSWN +L + E L F+
Sbjct: 321 LKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFE 380
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+M+R +PNE S + VLTAC++ G++D G + ++K +++PDV + + + + G
Sbjct: 381 QMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVG 440
Query: 401 VMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
++D A M E W +++ MH G A E E++ P
Sbjct: 441 LLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGP 494
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLT 394
L D + RG P+ +L C +G ++ G+ +H+++ + ++L ++
Sbjct: 72 LYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVN 131
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAKCG +D AR +FD M K++V+W ++I G+ + + AL +F +M + G PN T
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFT 191
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+L A + G + Y + V +VD+ R G M ++ +
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 515 PMEAGPALWGALLSACSTHSNSE 537
P ++ + W AL+S + E
Sbjct: 251 PTKSEVS-WNALISGHARKGEGE 272
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 253/455 (55%), Gaps = 39/455 (8%)
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+ H V+ G + D FV +L+ Y+ C V +AR+VF+ P DLV W M+D Y
Sbjct: 13 RGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNT 72
Query: 237 -----------------------------------REVGFARELFDFMPERDIFT----W 257
R + + + ++ DIF
Sbjct: 73 QNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLS 132
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+++I+ Y DME A+ ++ M +D+VS M+ GYAK G + AR+ F+ M ++VV
Sbjct: 133 SALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVV 192
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SW+ +++ Y E L LF++M P+E +++SV++ACAN+G +D +WIHS +
Sbjct: 193 SWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIV 252
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ + +L+ M++KCG + LA N+F+ M KNV++W SMI + MHG G AL
Sbjct: 253 GNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSAL 312
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
+F +M+ G PN TF+ +L AC HAG+V EG F+ M + Y+IEPK EHYGCMVDL
Sbjct: 313 TLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDL 372
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
+GRA LM+++ +L+ + + A+WG+LL+AC H + ELG+ A+ ++EL+P G Y
Sbjct: 373 MGRAKLMQEAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAY 432
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
VLLSNI+A G W+ + LR +MK + K G S
Sbjct: 433 VLLSNIHAKSGNWNNAQKLRVMMKVHGVSKETGYS 467
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 191/420 (45%), Gaps = 49/420 (11%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
TV+ H I ++ G +D F + ++ + V+ + FDG+ E D ++
Sbjct: 11 TVRGTHGIAVRV---GADEDGFVGTALVGAY-AACQRVAEARRVFDGMPERDLVAWGVML 66
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
S+ + L KM V + + C R LR GK +H+ I
Sbjct: 67 DSYFNTQNYRETL-LLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDI 125
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
+D + ++LI+MY+ C ++ A K++ DLV+ +M+ GY KN ++ AR +F+
Sbjct: 126 FVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNH 185
Query: 249 MPERDIFTWNSMISGYVD-----------------------------------VGDMEAA 273
M E+D+ +W++MIS Y + +G ++ A
Sbjct: 186 MAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKA 245
Query: 274 NGLFDLM---PFRDVVSW-NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+ ++ F ++S N +ID ++K G++T A N F+ M +NV++W ++A +
Sbjct: 246 RWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMH 305
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIKPDVLL 388
D L LF +M +PN + + +L AC + G++ G+ + +Q+ RI+P
Sbjct: 306 GDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEH 365
Query: 389 STSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
++ + + +M A ++ ++M NV W S++ MHG GE A + +E++
Sbjct: 366 YGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKKILELD 425
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 96/253 (37%), Gaps = 36/253 (14%)
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D + H + D + T+L+ YA C + AR VFD M E+++V+W M+ Y
Sbjct: 10 DTVRGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSY 69
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+ L + +M++ P+ VLS C H + G +Q + I
Sbjct: 70 FNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQ-VSDIFVD 128
Query: 488 VEHYGCMVDLLGR-----------AGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
++++ +G+ R ++LVS M G A G +
Sbjct: 129 ARLSSALINMYASCMDMEMADKIYSGMQR--KDLVSSTAMVCGYAKNGKI---------- 176
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
E+ + + H+ E +D + + + YA + EV NL M+ V P
Sbjct: 177 EIARSIFNHMAE---KDVVSWSAMISAYAENNQPSEVLNLFNKMQ---------GCGVSP 224
Query: 597 GEFASESIVENCP 609
E S++ C
Sbjct: 225 DEITMLSVISACA 237
>gi|147799976|emb|CAN68263.1| hypothetical protein VITISV_010806 [Vitis vinifera]
Length = 445
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 268/471 (56%), Gaps = 40/471 (8%)
Query: 53 IVDLSHPIL-QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLS 109
I L HP L Q L + + HQ H L+VSGL+ F +R+L L S S + +
Sbjct: 8 IEQLHHPSLSQALTALTATSHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHA 67
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
F P FM NTI+ + + +++FY + A N +TFP L K +
Sbjct: 68 KTIFLHTHNPSPFMFNTII---MASSRTLDSVTFYVCMLHAGHFPDN-FTFPFLIKSSSA 123
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ G ++HA +VK G + D+FV N++I +YS
Sbjct: 124 SPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYS-------------------------- 157
Query: 230 IDGYVKNREVGFARELFD-FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
RE+ AR++FD D+ +W ++I+G+ + G ++ A +FDLMP ++ VSW
Sbjct: 158 -----SFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSW 212
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N MI GYA + AR FD M R+ SW+ +++ Y + E L LF M+ GD
Sbjct: 213 NAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKM 272
Query: 349 -PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
PNEA+L+S ++ACA + ++ G+W+HSYI++ +++ +V L T LL MY KCG + A
Sbjct: 273 IPNEAALVSAVSACAQLXALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAG 332
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ M+E+NV SWNSMI G ++G G++AL +F +M+ GP+PN TFI +L+ C+H+G+
Sbjct: 333 VFNLMSERNVNSWNSMIAGLALNGCGKEALXLFWKMQFVGPSPNAITFIALLTGCSHSGL 392
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
+ EG W F +M ++Y I+P+++HYGCMVDLLGRAGL++++ + V + EA
Sbjct: 393 ITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEENANEA 443
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 266/471 (56%), Gaps = 9/471 (1%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA ++L + +K+H + FE D F+ NSLIH+Y CG V++A KVF+ D+V+
Sbjct: 60 ACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVS 119
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMI---SGYVDVGDMEAANGLFD 278
W S+I GY +N +G + + + FT+ S++ Y D G + L
Sbjct: 120 WTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAV 179
Query: 279 LMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
+ DV + ++D YA+ G + A FD++ +N VSWN L++ + R D L
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
+F M R + + S+ + A +G ++ G+W+H+++ K R K + ++L MYA
Sbjct: 240 VFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYA 299
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
K G M AR VF+ + K++V+WNSM+ + +G G++A+ F EM K G N TF+C
Sbjct: 300 KSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLC 359
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+L+AC+H G+V EG YFD+++ Y +EP++EHY +VDLLGRAGL+ + + K+PME
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPME 418
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A+WGALL+AC H N+++G+ A H+ +L+P D GP VLL NIYAS G WD +R
Sbjct: 419 PTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVR 478
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
++MK ++K S V G + + R +Y M EI +++
Sbjct: 479 KMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIR 529
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 184/388 (47%), Gaps = 11/388 (2%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P + H + + + +IH L S D+F + ++ C S V +
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F D +++ D +++ + + P A+ + +F + N +TF L K
Sbjct: 109 F-DKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRF-KPNGFTFASLLKAAGAYA 166
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
G ++HA VKC + D++V ++L+ MY+ CG++ A VF+ + V+WN++I
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 232 GYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLF-DLMPFRDVV 286
G+ + + A +F M E FT++S+ SG +G +E + ++ R +
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286
Query: 287 S---WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+ N M+D YAK G++ AR F+R+ +++V+WN +L + + E + F+ M
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ N+ + + +LTAC++ G++ G+ I++ ++P++ +++ + + G+++
Sbjct: 347 KSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLN 406
Query: 404 LAR-NVFDNMTEKNVVSWNSMIMGYGMH 430
A +F E W +++ MH
Sbjct: 407 YALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L D + G+ P + +TACA +D + IH ++ R + D L SL+ +
Sbjct: 36 LHDLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHL 95
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG + A VFD M +K++VSW S+I GY + +A+ + M K PN TF
Sbjct: 96 YCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY------GCMVDLLGRAGLMRDSEE 509
+L A AG + + +I+ + K + + ++D+ R G M +
Sbjct: 156 ASLLKA---AGAYADS----GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATA 208
Query: 510 LVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
+ KL + G + W AL+S + + E +V
Sbjct: 209 VFDKLDSKNGVS-WNALISGFARKGDGETALMV 240
>gi|357116134|ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Brachypodium distachyon]
Length = 601
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 304/583 (52%), Gaps = 54/583 (9%)
Query: 56 LSHPILQKLESC-STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLS--VLF 112
L HP L LE C + F I +L L+ ++F SR+L + + +LF
Sbjct: 19 LDHPALVLLERCRGGARPFKAILAHMLRVRLAFETFPMSRLLYFATVAFPQYTREALLLF 78
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF-PLLGKV-CAGI 170
P+ + N ++ + AL Y+ M+A + TF LL V CA +
Sbjct: 79 EHFTTRPNLYCYNLVLSALSSSQSRSVAL---YKSMLASSASPDEKTFLSLLKSVGCASV 135
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
GK+VHA ++ G +++RNSLI MY G+ A +F+ PV D+V+ N M+
Sbjct: 136 -----GKQVHAHVLVNGLHSRVYLRNSLIKMYLDAGDAETAEAMFQSVPVPDVVSCNIML 190
Query: 231 DGYVKNREVGFARELFDFMPERDI------------------------------------ 254
GYVK V A +LF M R+I
Sbjct: 191 SGYVKGGCVVNALQLFRDMASREIGVDQYAAVALLSCCGRLKNALLGRSVHGVVVRRMDI 250
Query: 255 -----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
N+++ Y G+M A +F +D +SWN MI G+A G + A F
Sbjct: 251 KDRGLILSNALLDMYAKCGEMNTAMRVFGEAKEKDDISWNTMIAGFANDGMLDLASKFFF 310
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
R+++SWN LLA Y RC+++ + LF+ M+ +P++ + +++++A + G +++
Sbjct: 311 DAPCRDLISWNTLLAGYGRCREFAAVMELFNDMLSSRVRPDKVTAVTLISAAVSKGALNL 370
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G+ +H ++ K D L+++L+ MY KCG + LA VF+ +K+V W +MI G
Sbjct: 371 GKSVHGWVLKEHGTQDAFLASTLVDMYCKCGNVKLAYAVFEKALDKDVTLWTAMISGLAF 430
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HG G +AL++F M+ G PN T + VLSAC+HAG++ EG F MQ+ + IEP+VE
Sbjct: 431 HGHGTEALDLFWNMQNEGVAPNGVTLVTVLSACSHAGLLDEGCEIFYTMQKRFNIEPRVE 490
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
H+GCMVDLL R+G + D+ L +PM+ ++WG++LS S+ N+E+ +I ++ L+ L
Sbjct: 491 HFGCMVDLLARSGRLSDAVGLARMMPMKPSRSIWGSILSVSSSCQNTEVAEIASKELLRL 550
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
EP + G YVLLSN+YA+ G+W+ +R M+ + + K+ G+S
Sbjct: 551 EPTEEGGYVLLSNLYAAGGQWNYSNKVRENMEMRGVRKSAGAS 593
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 267/462 (57%), Gaps = 11/462 (2%)
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+M A E N T + CA +++L GK++H + + GF + FV N L+ +Y C
Sbjct: 36 RMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCA 95
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP--ERDIFTWNSMISGY 264
++ A K+F V ++V++N+MI GY +N V A+ELFD M +D +WNSMISGY
Sbjct: 96 DMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGY 155
Query: 265 VD----VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR----NV 316
D D++AA FD + RD +WN +I GYA + + +N +M NV
Sbjct: 156 ADNLLKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNV 215
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
+WN +++ +V LRLF M +P+ ++ +L ACA + I G+ +H++
Sbjct: 216 YTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAH 275
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ + DV + +L+ MYAKCG + A V++ ++ N+VS N+M+ Y MHG G++
Sbjct: 276 SIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEG 335
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+ +F M G P+ TF+ VLS+C HAG V G +FDLM Y + P ++HY C+VD
Sbjct: 336 IALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTCIVD 394
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LL RAG + ++ ELV K+P + +WGALL C N ELG+I A+ L+ELEP + G
Sbjct: 395 LLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGN 454
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
YVLL+N+YA G+W +++ R+++K++ + K+ G S + E
Sbjct: 455 YVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDRE 496
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%)
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
N+VSW+ ++ + + E L L RM +PN +L SVL ACA + +++G+ IH
Sbjct: 10 NLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIH 69
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
Y+ + + + L+ +Y +C M A +F + KNVVS+N+MI+GY +G E
Sbjct: 70 GYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVE 129
Query: 435 KALEMFMEMEKRG 447
KA E+F +ME G
Sbjct: 130 KAKELFDQMELVG 142
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 16/261 (6%)
Query: 78 TQLLVSGLSQDSFAASRVL---KKLCTSLSSVS--LSVLFFDGIQEPDAFMCNTIMKSFL 132
QL G+++ A VL C L ++ + + DG EP+ + N I+ +
Sbjct: 168 AQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGF-EPNVYTWNGIISGHV 226
Query: 133 MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
AL + E M + + YT ++ CA + ++ GK+VHA ++ G+ELD+
Sbjct: 227 ENGHNELALRLFTE-MQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDV 285
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV----KNREVGFARELFDF 248
+ +L+ MY+ CG + A +V+ +LV+ N+M+ Y + + R +
Sbjct: 286 HIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGN 345
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV----SWNCMIDGYAKIGNVTSA 304
D T+ S++S V G +E + FDLM + +V + C++D ++ G + A
Sbjct: 346 GFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEA 405
Query: 305 RNCFDRMCMR-NVVSWNILLA 324
++ + + V W LL
Sbjct: 406 YELVKKIPRKPDSVMWGALLG 426
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
++ N+VSW+++I G+ +G ++ALE+ M+ G PN T VL AC
Sbjct: 7 SKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACA 57
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 264/484 (54%), Gaps = 45/484 (9%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH--MYSVCGEVLD 210
+EHN Y + C+ L K++HAR++K G D + + + S + L
Sbjct: 10 LEHNLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 211 -ARKVFEDGPVWDLVTWNSMIDGYVKNRE-----VGFARELFDFMP-------------- 250
A+ VF+ D WN MI G+ + E + + R L P
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 251 --------------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
E D++ NS+I+ Y G+ + A+ LFD +P D VSWN
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+I GY K G + A F +M +N +SW +++ YV+ E L+LF M D +P+
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
SL + L+ACA +G ++ G+WIHSY+ K RI+ D +L L+ MYAKCG M+ A VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
N+ +K+V +W ++I GY HG G +A+ FMEM+K G PN TF VL+AC++ G+V E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F M+R Y ++P +EHYGC+VDLLGRAGL+ +++ + ++P++ +WGALL AC
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N ELG+ + + L+ ++P G YV +NI+A + KWD+ RR+MKE+ + K G
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 591 SSLV 594
S +
Sbjct: 487 CSTI 490
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 208/427 (48%), Gaps = 47/427 (11%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFFDGIQEPDA 121
L+ CS +E QIH ++L +GL QDS+A ++ L +S SS + + + FDG PD
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
F+ N +++ F ++P +L Y++M+ HN YTFP L K C+ + + E ++HA
Sbjct: 81 FLWNLMIRGFSCSDEPERSL-LLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+I K G+E D++ NSLI+ Y+V G A +F+ P D V+WNS+I GYVK ++
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN------------ 289
A LF M E++ +W +MISGYV + A LF M DV N
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 290 ---------------------------CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
+ID YAK G + A F + ++V +W L
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCR 381
++ Y E + F M + KPN + +VLTAC+ G+++ G+ I +S +
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKAL 437
+KP + ++ + + G++D A+ M K N V W +++ +H GE+
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIG 439
Query: 438 EMFMEME 444
E+ + ++
Sbjct: 440 EILIAID 446
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 296/566 (52%), Gaps = 62/566 (10%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L CS +K HQ H +L L D+ S ++ + S+ LF P+ F+
Sbjct: 18 LNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIFL 77
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
NTI+++ + P ++ F + ++ + + + Y+FP K + + + G + H++
Sbjct: 78 YNTIIRALSLSPQPSLSI-FLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHSQA 136
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
++ G L V SLI MYS + + AR
Sbjct: 137 IRFGLHSHLHVLVSLIRMYS--------------------------------SSHISDAR 164
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+LFD +P + R+V WN M+ YAKI ++ +
Sbjct: 165 KLFDGIP-----------------------------LTARNVALWNAMLTSYAKICDMPN 195
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A++ FD M RN++SW L++ Y + + +F M + P+E +L++VL+ACA
Sbjct: 196 AQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVLSACAQ 255
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G +++G+WI +YI + +V L +L+ MYAK G + A +F++M K +V+W +M
Sbjct: 256 LGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTM 315
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G +HG G +ALEMF ME+ PN+ TFI VLSAC+H G+V +F M+ Y
Sbjct: 316 IAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYT 375
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
I+PK+EHYGCM+DLLGRAG ++++++L+ ++P E A+WG+LL+A TH ++ LG+
Sbjct: 376 IQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERTL 435
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
+HL+ELEP + G Y LLSNIYAS G+W +R++M+++ ++K G S + +E
Sbjct: 436 KHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNNRVNEF 495
Query: 604 IVENCPPHRKCIVYSMLGEIGAQMKM 629
I + +Y ++ +I Q ++
Sbjct: 496 IAGETSHPQFDEIYEVIYKINEQSRL 521
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/575 (32%), Positives = 311/575 (54%), Gaps = 12/575 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C ++ + ++H + G D F A+ L L + + ++ F + D
Sbjct: 131 LKACVSLVDGKKVHCCVFKMGFEDDVFVAAS-LVHLYSRYGVLDVAHKVFVDMPVKDVGS 189
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ F + GAL +M + V+ + T + VCA + G +H +
Sbjct: 190 WNAMISGFCQNGNAAGALGVL-NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G + D+FV N+LI+MYS G + DA+ VF+ V DLV+WNS+I Y +N + A
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308
Query: 244 ELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDG 294
F M D+ T S+ S + + D + + + R DVV N +++
Sbjct: 309 RFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNM 368
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEAS 353
YAK+G + A FD++ ++ +SWN L+ Y + E + ++ M D PN+ +
Sbjct: 369 YAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+S++ A +++G + G IH+ + K + DV ++T L+ +Y KCG ++ A ++F +
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
V WN++I G+HG+GE+AL++F +M + TF+ +LSAC+H+G+V EG
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
FD+MQ+ Y I+P ++HYGCMVDLLGRAG + + ELV +P++ ++WGALLSAC +
Sbjct: 549 CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIY 608
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N+ELG + + L+E++ + G YVLLSNIYA+ KW+ V +R + +++ L K G S
Sbjct: 609 GNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSS 668
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
V G A N + +Y L + A+MK
Sbjct: 669 VVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMK 703
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 278/551 (50%), Gaps = 29/551 (5%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
SC V ++H LLV G SQ+ +++++ L + +SLS FD I + + F
Sbjct: 29 FNSCVNVNATKKLHALLLVFGKSQNIVLSTKLI-NLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 124 CNTIMKSFLML---NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
N+I+ +++ ++ ++ + + + YTFP + K C SL +GKKVH
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVH 144
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ K GFE D+FV SL+H+YS G + A KVF D PV D+ +WN+MI G+ +N
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 241 FARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANG-LFDLMPFR-----DVVSWNC 290
A + + M + D T S++ D+ NG L L + DV N
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDV--INGVLIHLHVLKHGLDSDVFVSNA 262
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+I+ Y+K G + A+ FD+M +R++VSWN ++A Y + D LR F M G +P+
Sbjct: 263 LINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD 322
Query: 351 EASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+++S+ + + + I + I + I++ + DV++ +L+ MYAK G M+ A VF
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMV 468
D + K+ +SWN+++ GY +G +A++ + ME+ R PN T++ ++ A +H G +
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442
Query: 469 LEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+G + L++ ++ V C++DL G+ G + D+ L ++P + W A++
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAII 499
Query: 528 SACSTHSNSELG-KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
++ H E ++ L E D +V L + + G DE + IM++ E
Sbjct: 500 ASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQK---E 556
Query: 587 KAVGSSLVHPG 597
+ SL H G
Sbjct: 557 YGIKPSLKHYG 567
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 178/442 (40%), Gaps = 77/442 (17%)
Query: 155 HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKV 214
H F L C + + KK+HA ++ G ++ + LI++Y G++ +R
Sbjct: 20 HKDADFNALFNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRST 76
Query: 215 FEDGPVWDLVTWNSMIDGYVK----NREVGFARELFD-------------FMP------- 250
F+ ++ +WNS+I YV+ + + +LF F P
Sbjct: 77 FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS 136
Query: 251 ----------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
E D+F S++ Y G ++ A+ +F MP +DV SWN MI G
Sbjct: 137 LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISG 196
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
+ + GN A +RM V K + ++
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGV-------------------------------KMDTITV 225
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
S+L CA + G IH ++ K + DV +S +L+ MY+K G + A+ VFD M
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
+++VSWNS+I Y + AL F M+ G P+ T + + S +
Sbjct: 286 RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
+ R ++ V +V++ + G M + + +LP + + W L++ T +
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS-WNTLVTG-YTQN 403
Query: 535 NSELGKIVAQHLMELEPRDPGP 556
I A ++ME E RD P
Sbjct: 404 GLASEAIDAYNMME-ECRDTIP 424
>gi|297599623|ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa Japonica Group]
Length = 493
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 253/441 (57%), Gaps = 32/441 (7%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+H + C+ + S VH+ V+ G D++V N+ Y +V A ++F
Sbjct: 70 DHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASAERLF 129
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
+ +R+V D+ TW +M++G+ + GD+E A
Sbjct: 130 SEA-----------------SRDVA------------DVVTWTTMVTGHANAGDVERARW 160
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE- 334
FD MP ++VVSWN M+ YA+ G + AR FDRM RN +W ++ ++ D+CE
Sbjct: 161 FFDAMPEKNVVSWNTMLGAYARAGMLPKARKLFDRMPSRNAATWGSMITGLLQ-SDHCEE 219
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLL 393
LR+F M+ PNE +L+S ++AC + ++ G W+H Y ++ +L+T+++
Sbjct: 220 ALRVFSDMVASGVVPNEPALVSTVSACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIV 279
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY KCG + A VF M +N+ SWNSMI G M+G +AL +F +M+ G PND
Sbjct: 280 DMYGKCGSIRDAVRVFAAMPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDI 339
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
TFI +LSAC+H+G+V EG W F M + I+P EHYG MVDLLGR+G +R++ + V
Sbjct: 340 TFIGLLSACSHSGLVDEGRWLFYKMVNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKS 399
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P+E P LWGAL AC H ELG+ VA+ L+ELEP+ Y+LLSNIYA+ +WD++
Sbjct: 400 MPVEPHPGLWGALAGACKIHGEVELGEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDM 459
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
N+RRI+K++++ K G+++V
Sbjct: 460 ANVRRILKDRKVPKGTGNAIV 480
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 259/438 (59%), Gaps = 7/438 (1%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ C L+ GK VH ++ GFE D N LI MY+ CG++L A++VF+ D V
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389
Query: 225 TWNSMIDGYVKNREVGFARELFDFMP-ER--DIFTWNSMISGYVDVGDMEAANGLF-DLM 280
TWNS+I+GY ++ E F M ER D T+ ++S + + D+ G+ D++
Sbjct: 390 TWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVI 449
Query: 281 PF---RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
F +++ N ++D YAK G + F M +++SWN ++A V D +
Sbjct: 450 KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQ 509
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
+ + M P+EA+++ +L C+ + V G+ IH YI K + +V + +L+ MY+
Sbjct: 510 MINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYS 569
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG ++ VF M EK+VV+W ++I +GM+G+G+KAL+ F +ME G P+ FI
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+ AC+H+GMV EG +FD M+ Y +EP++EHY C+VDLL R+GL+ +EE + +PM+
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMK 689
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
+LWGALLSAC N+ + + V++ ++EL D G YVL+SNIYA+ GKWD+V+ +R
Sbjct: 690 PDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVR 749
Query: 578 RIMKEKELEKAVGSSLVH 595
MK K L+K GSS +
Sbjct: 750 NSMKTKGLKKEPGSSWIE 767
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 243/495 (49%), Gaps = 41/495 (8%)
Query: 31 PPKLWAN-----EPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
PPK +N EP +F L +L+ L S + +H+ ++ SGL
Sbjct: 3 PPKFCSNFNNTPEPSQEF------------LRSSLLKTLSSAKNTPQLRTVHSLIITSGL 50
Query: 86 SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
S + +++ K +S +F + ++ N+I+++ L N F YY
Sbjct: 51 SLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRA-LTHNGLFTQALGYY 109
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+M K ++ + +TFP + CA I L G VH ++ GFE DL++ N+LI MYS
Sbjct: 110 TEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRF 169
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-------RDIFTWN 258
++ +AR VFE+ D V+WNS+I GY N GF + D + D FT +
Sbjct: 170 VDLDNARYVFEEMSNRDSVSWNSLISGYCSN---GFWEDALDMYHKFRMTGMVPDCFTMS 226
Query: 259 SMI---SGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
S++ + V + A +G+ + + DV+ N ++ Y K + AR F +M ++
Sbjct: 227 SVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+ V+WN ++ Y + + ++LF MI G P+ S+ S + AC G + +G+++H
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVH 345
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
Y+ + D + L+ MYAKCG + A+ VFD K+ V+WNS+I GY G +
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405
Query: 435 KALEMF--MEMEKRGPTPNDATFICVLSACTHAGMVLEG-WWYFDLMQRIYKIEPKVEHY 491
+ LE F M+ME++ P+ TF+ +LS + + +G + D+++ + E ++
Sbjct: 406 EGLESFKMMKMERK---PDSVTFVLLLSIFSQLADINQGRGIHCDVIK--FGFEAELIIG 460
Query: 492 GCMVDLLGRAGLMRD 506
++D+ + G M D
Sbjct: 461 NSLLDVYAKCGEMDD 475
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 166/402 (41%), Gaps = 67/402 (16%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H L+ SG D+ A + +L + + + FD + D+ N+++ +
Sbjct: 344 VHKYLIGSGFECDTVACN-ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ-- 400
Query: 136 DPFGALSFYYE------KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
S YY+ KMM + + TF LL + + + + +G+ +H ++K GFE
Sbjct: 401 ------SGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFE 454
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE--VGF------ 241
+L + NSL+ +Y+ CGE+ D KVF D+++WN++I V + VGF
Sbjct: 455 AELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEM 514
Query: 242 ---------------------------ARELFDFM----PERDIFTWNSMISGYVDVGDM 270
+E+ ++ E ++ N++I Y G +
Sbjct: 515 RTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSL 574
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
E +F M +DVV+W +I + G A F M + V+ ++ ++
Sbjct: 575 ENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634
Query: 331 DYC----ECLRLFDRMIRG-DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ E LR FDRM + +P V+ A G++ + +I +KPD
Sbjct: 635 SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE---EFILSMPMKPD 691
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
L +LL+ G ++A+ V K ++ NS GY
Sbjct: 692 ASLWGALLSACRARGNTNIAQRV-----SKKILELNSDDTGY 728
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 252/405 (62%), Gaps = 3/405 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I G + +A +FE P+ D+++W +M+DG KN +V AR LFD MPER+I
Sbjct: 175 NTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MI+GY ++ A+ LF +MP RD SWN MI G+ + + A FDRM +N
Sbjct: 235 SWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKN 294
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIH 374
V+SW ++ YV K+ E L++F +M+R G KPN + +S+L+AC+++ + GQ IH
Sbjct: 295 VISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQ 432
I K + + +++++L+ MY+K G + AR +FDN + +++++SWNSMI Y HG
Sbjct: 355 QLISKSVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G++A+EM+ +M K G P++ T++ +L AC+HAG+V +G +F + R + + EHY
Sbjct: 415 GKEAIEMYDQMRKHGFKPSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESLPLREEHYT 474
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VDL GRAG ++D ++ + +GA+LSAC+ HS + K V + ++E
Sbjct: 475 CLVDLCGRAGRLKDVLNFINCDDARLSRSFYGAILSACNVHSEVSIAKEVVKKVLETGSD 534
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
D G YV++SNIYA+ GK ++ +R MKEK L+K G S V G
Sbjct: 535 DAGTYVMMSNIYAASGKREKAAEMRMKMKEKGLKKQPGCSWVKIG 579
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 188/360 (52%), Gaps = 28/360 (7%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFED-GP 219
L+GK+C + GK AR + G E D+ +I Y G + +AR++F+
Sbjct: 52 LIGKLC------KVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDS 105
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
++VTW +M+ GY++++++ A LF MPER+I +WN+MI GY G ++ A LFD
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
MP R+ VSWN MI + G + A N F+RM +++V+SW ++ + E RLF
Sbjct: 166 MPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLF 225
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST--SLLTMYA 397
D M + N S +++T ID Q ++ P+ ++ +++T +
Sbjct: 226 DCM----PERNIISWNAMITGYTYNNRIDEAD------QLFQVMPERDFASWNTMITGFI 275
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG-PTPNDATFI 456
+ ++ A +FD M +KNV+SW +MI GY + + E+AL++F +M + G PN T++
Sbjct: 276 RNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYV 335
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+LSAC+ ++EG Q+I+++ K H V + S EL++ M
Sbjct: 336 SILSACSDLAGLVEG-------QQIHQLISKSVHQENEVVTSALINMYSKSGELIAARKM 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + + ++ ++ + AL + + + V+ N T+ + C+ +
Sbjct: 286 LFDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLA 345
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV--WDLVTWNSM 229
L EG+++H I K + + V ++LI+MYS GE++ ARK+F++G V DL++WNSM
Sbjct: 346 GLVEGQQIHQLISKSVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 230 IDGYVKNREVGFARELFDFM 249
I Y + A E++D M
Sbjct: 406 IAVYAHHGHGKEAIEMYDQM 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
KP V L+ K G + AR +FD + E++VV+W +I GY G +A E+F
Sbjct: 43 KPRVPRPEWLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDR 102
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
++ R N T+ ++S + + F M E + + M+D ++G
Sbjct: 103 VDSR---KNVVTWTAMVSGYLRSKQLSVAETLFQEMP-----ERNIVSWNTMIDGYAQSG 154
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI-VAQHLMELEP-RDPGPYVLL 560
+ + EL ++P E W ++ A + G+I A +L E P +D + +
Sbjct: 155 RIDKALELFDEMP-ERNTVSWNTMIKAL-----VQRGRIDEAMNLFERMPIKDVISWTAM 208
Query: 561 SNIYASEGKWDEVENLRRIMKEKEL 585
+ A GK DE L M E+ +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNI 233
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 232/344 (67%)
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E+D++ NS++ Y GD EAA +F M + DVVSW MI G+ K G+V SAR FD+
Sbjct: 151 EKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQ 210
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M +N+V+W+ +++ Y + + + + LF + + NE ++SV+++CA++G +++G
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELG 270
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ H Y+ K + +++L T+L+ MYA+CG +D A VF+++ E++ +SW ++I G MH
Sbjct: 271 ERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMH 330
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G E++L+ F M + G TP D TF VLSAC+H G+V G+ F+ M+R +++EP++EH
Sbjct: 331 GYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEH 390
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCMVDLLGRAG + ++E V K+P++ +WGALL AC H N+E+G+ V + L++L
Sbjct: 391 YGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLL 450
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
P+ G YVLLSNIYA+ +W++V +R++MK K L+K G SL+
Sbjct: 451 PQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLI 494
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 196/424 (46%), Gaps = 47/424 (11%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS----VSLSVL 111
L +P L LE+CS + IH ++ + + D FAASR++ C SS + +
Sbjct: 16 LKNPKLFSLETCSDLTHLKIIHAYMIRTHIICDVFAASRLIA-FCVDPSSGTSLIDYASR 74
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F IQ P+ F+ N +++ +P A FY + + N TFP L K C +
Sbjct: 75 IFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDN-LTFPFLVKSCTKLH 133
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+ G + H I+K GFE D++V+NSL+HMY+ G+ A +F+ D+V+W SMI
Sbjct: 134 CISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIR 193
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV------ 285
G+ K +V AR+LFD MPE+++ TW++MISGY + A LF ++ + V
Sbjct: 194 GFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETV 253
Query: 286 ---------------------------------VSWNCMIDGYAKIGNVTSARNCFDRMC 312
+ ++D YA+ G++ A F+ +
Sbjct: 254 MVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLP 313
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-Q 371
R+ +SW L+A L+ F M+ P + + +VL+AC++ G+++ G Q
Sbjct: 314 ERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQ 373
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA-RNVFDNMTEKNVVSWNSMIMGYGMH 430
S + R++P + ++ + + G ++ A R V + N W +++ +H
Sbjct: 374 IFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIH 433
Query: 431 GQGE 434
E
Sbjct: 434 KNAE 437
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 292/553 (52%), Gaps = 67/553 (12%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE 118
P LQ+++S + E+ +I+ +++ GLSQ SF ++++ C + + + F+ +
Sbjct: 15 PFLQRVKSRN---EWKKINASIIIHGLSQSSFMVTKMVD-FCDKIEDMDYATRLFNQVSN 70
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P+ F+ Y ++ + ++ Y C IR
Sbjct: 71 PNVFL---------------------YNSIIRAYTHNSLY--------CDVIR------- 94
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
++ ++++ FEL R + M+ C S+ Y+ +
Sbjct: 95 IYKQLLRKSFELP--DRFTFPFMFKSCA---------------------SLGSCYLGKQV 131
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
G L F P + T N++I Y+ D+ A+ +FD M RDV+SWN ++ GYA++
Sbjct: 132 HG---HLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A+ F M + +VSW +++ Y Y E + F M +P+E SL+SVL
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+CA +G +++G+WIH Y ++ + +L+ MY+KCGV+ A +F M K+V+
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVI 308
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW++MI GY HG A+E F EM++ PN TF+ +LSAC+H GM EG YFD+M
Sbjct: 309 SWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMM 368
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
++ Y+IEPK+EHYGC++D+L RAG + + E+ +PM+ +WG+LLS+C T N ++
Sbjct: 369 RQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDV 428
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
+ HL+ELEP D G YVLL+NIYA GKW++V LR++++ + ++K G SL+
Sbjct: 429 ALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488
Query: 599 FASESIV-ENCPP 610
E + +N P
Sbjct: 489 IVQEFVSGDNSKP 501
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/575 (32%), Positives = 311/575 (54%), Gaps = 12/575 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C ++ + ++H + G D F A+ L L + + ++ F + D
Sbjct: 131 LKACVSLVDGKKVHCCVFKMGFEDDVFVAAS-LVHLYSRYGVLDVAHKVFVDMPVKDVGS 189
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ F + GAL +M + V+ + T + VCA + G +H +
Sbjct: 190 WNAMISGFCQNGNAAGALGVL-NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G + D+FV N+LI+MYS G + DA+ VF+ V DLV+WNS+I Y +N + A
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308
Query: 244 ELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDG 294
F M D+ T S+ S + + D + + + R DVV N +++
Sbjct: 309 RFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNM 368
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEAS 353
YAK+G + A FD++ ++ +SWN L+ Y + E + ++ M D PN+ +
Sbjct: 369 YAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+S++ A +++G + G IH+ + K + DV ++T L+ +Y KCG ++ A ++F +
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
V WN++I G+HG+GE+AL++F +M + TF+ +LSAC+H+G+V EG
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
FD+MQ+ Y I+P ++HYGCMVDLLGRAG + + ELV +P++ ++WGALLSAC +
Sbjct: 549 CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIY 608
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N+ELG + + L+E++ + G YVLLSNIYA+ KW+ V +R + +++ L K G S
Sbjct: 609 GNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSS 668
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
V G A N + +Y L + A+MK
Sbjct: 669 VVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMK 703
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 278/551 (50%), Gaps = 29/551 (5%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
SC V ++H LLV G SQ+ +++++ L + +SLS FD I + + F
Sbjct: 29 FNSCVNVNATKKLHALLLVFGKSQNIVLSTKLI-NLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 124 CNTIMKSFLML---NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
N+I+ +++ ++ ++ + + + YTFP + K C SL +GKKVH
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVH 144
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ K GFE D+FV SL+H+YS G + A KVF D PV D+ +WN+MI G+ +N
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 241 FARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANG-LFDLMPFR-----DVVSWNC 290
A + + M + D T S++ D+ NG L L + DV N
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDV--INGVLIHLHVLKHGLDSDVFVSNA 262
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+I+ Y+K G + A+ FD+M +R++VSWN ++A Y + D LR F M G +P+
Sbjct: 263 LINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD 322
Query: 351 EASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+++S+ + + + I + I + I++ + DV++ +L+ MYAK G M+ A VF
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMV 468
D + K+ +SWN+++ GY +G +A++ + ME+ R PN T++ ++ A +H G +
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442
Query: 469 LEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+G + L++ ++ V C++DL G+ G + D+ L ++P + W A++
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAII 499
Query: 528 SACSTHSNSELG-KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
++ H E ++ L E D +V L + + G DE + IM++ E
Sbjct: 500 ASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQK---E 556
Query: 587 KAVGSSLVHPG 597
+ SL H G
Sbjct: 557 YGIKPSLKHYG 567
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 178/442 (40%), Gaps = 77/442 (17%)
Query: 155 HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKV 214
H F L C + + KK+HA ++ G ++ + LI++Y G++ +R
Sbjct: 20 HKDADFNALFNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRST 76
Query: 215 FEDGPVWDLVTWNSMIDGYVK----NREVGFARELFD-------------FMP------- 250
F+ ++ +WNS+I YV+ + + +LF F P
Sbjct: 77 FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS 136
Query: 251 ----------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
E D+F S++ Y G ++ A+ +F MP +DV SWN MI G
Sbjct: 137 LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISG 196
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
+ + GN A +RM V K + ++
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGV-------------------------------KMDTITV 225
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
S+L CA + G IH ++ K + DV +S +L+ MY+K G + A+ VFD M
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
+++VSWNS+I Y + AL F M+ G P+ T + + S +
Sbjct: 286 RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
+ R ++ V +V++ + G M + + +LP + + W L++ T +
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS-WNTLVTG-YTQN 403
Query: 535 NSELGKIVAQHLMELEPRDPGP 556
I A ++ME E RD P
Sbjct: 404 GLASEAIDAYNMME-ECRDTIP 424
>gi|15220741|ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product [Arabidopsis thaliana]
gi|332195821|gb|AEE33942.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/550 (34%), Positives = 296/550 (53%), Gaps = 32/550 (5%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCN 125
SC ++ F + +L S+DSF+ + ++ + + ++L F+ + E +A +
Sbjct: 114 SCGGIR-FLEEARKLFDEMPSRDSFSWNTMISGYAKN-RRIGEALLLFEKMPERNAVSWS 171
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV-----H 180
++ F N + + KM K + PL V I++ R + +
Sbjct: 172 AMITGFCQ-NGEVDSAVVLFRKMPVK------DSSPLCALVAGLIKNERLSEAAWVLGQY 224
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP---------------VWDLVT 225
+V G E ++ N+LI Y G+V AR +F+ P ++V+
Sbjct: 225 GSLVS-GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
WNSMI Y+K +V AR LFD M +RD +WN+MI GYV V ME A LF MP RD
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
SWN M+ GYA +GNV AR+ F++ ++ VSWN ++A Y + KDY E + LF RM
Sbjct: 344 HSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
KP+ +L S+L+A + + +G +H + K I PDV + +L+TMY++CG + +
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMES 462
Query: 406 RNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
R +FD M ++ V++WN+MI GY HG +AL +F M+ G P+ TF+ VL+AC H
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG+V E F M +YKIEP++EHY +V++ G ++ +++ +P E +WG
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
ALL AC ++N L + A+ + LEP PYVLL N+YA G WDE +R M+ K
Sbjct: 583 ALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKR 642
Query: 585 LEKAVGSSLV 594
++K GSS V
Sbjct: 643 IKKERGSSWV 652
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 202/440 (45%), Gaps = 56/440 (12%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G + +AR +FE + VTWN+MI GYVK RE+ AR+LFD MP+RD+ TWN+MISGYV
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 266 DVGD---MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
G +E A LFD MP RD SWN MI GYAK + A F++M RN VSW+ +
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCR 381
+ + + + + LF +M D+ P L +++ + W+ Y
Sbjct: 174 ITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVS 229
Query: 382 IKPDVLLS-TSLLTMYAKCGVMDLARNVFDNMTE---------------KNVVSWNSMIM 425
+ D++ + +L+ Y + G ++ AR +FD + + KNVVSWNSMI
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
Y G A +F +M+ R + ++ ++ H + + + F M
Sbjct: 290 AYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMP-----N 340
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
+ MV G + + K P E W ++++A N + + V
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTP-EKHTVSWNSIIAA--YEKNKDYKEAVDLF 397
Query: 546 L-MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESI 604
+ M +E P P+ L S + AS G + NLR M+ ++ +++
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSASTG----LVNLRLGMQMHQI--------------VVKTV 439
Query: 605 VENCPPHRKCI-VYSMLGEI 623
+ + P H I +YS GEI
Sbjct: 440 IPDVPVHNALITMYSRCGEI 459
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 49/422 (11%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF---ARELFDFMPER 252
N++I Y E+ ARK+F+ P D+VTWN+MI GYV + F AR+LFD MP R
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D F+WN+MISGY + A LF+ MP R+ VSW+ MI G+ + G V SA F +M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 313 MRNVVSWNILLALYVRCKDYCEC---LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
+++ L+A ++ + E L + ++ G L N ++
Sbjct: 195 VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRED---------LVYAYNTLIVGY 245
Query: 370 GQWIHSYIQKC-------------------RIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
GQ +C R +V+ S++ Y K G + AR +FD
Sbjct: 246 GQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M +++ +SWN+MI GY + E A +F EM P + ++ ++S G V
Sbjct: 306 QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM----PNRDAHSWNMMVSGYASVGNVEL 361
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA---GPALWGALL 527
YF+ + + + ++ + +++ +L ++ +E P +LL
Sbjct: 362 ARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SA + N LG + Q +++ D + L +Y+ G E+ RRI E +L++
Sbjct: 417 SASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCG---EIMESRRIFDEMKLKR 473
Query: 588 AV 589
V
Sbjct: 474 EV 475
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
L + G + AR++F+ + +N V+WN+MI GY + +A ++F M KR +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR----DV 102
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV- 511
T+ ++S G G + + ++++ P + + + G A R E L+
Sbjct: 103 VTWNTMISGYVSCG----GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 512 -SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV-----LLSNIYA 565
K+P E W A+++ N E+ V ++ +D P L+ N
Sbjct: 159 FEKMP-ERNAVSWSAMITGFC--QNGEVDSAVVL-FRKMPVKDSSPLCALVAGLIKNERL 214
Query: 566 SEGKW 570
SE W
Sbjct: 215 SEAAW 219
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/498 (32%), Positives = 272/498 (54%), Gaps = 45/498 (9%)
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
E +Y P L +V +S E KK+HA I+ G F+ ++ + G++ A +
Sbjct: 8 EVENYFIPFLQRV----KSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATR 63
Query: 214 VFEDGPVWDLVTWNSMIDGYVKN---------------REVGFAR--------------- 243
+F ++ +NS+I Y N + + F
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLG 123
Query: 244 ----------ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
L+ F P + T N++I Y+ D+ A+ +FD M RDV+SWN ++
Sbjct: 124 SCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLS 183
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
GYA++G + A+ F M + +VSW +++ Y Y E + F M +P+E S
Sbjct: 184 GYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
L+SVL +CA++G +++G+WIH Y ++ + + +L+ MY+KCG++ A +F+
Sbjct: 244 LISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTK 303
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
K+V+SW++MI GY HG +A E F+EM++ PN TF+ +LSAC+H G+ +G
Sbjct: 304 GKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLK 363
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
YFD+M++ Y+IEPK+EHYGC++D+L RAG + + E+ +P++ +WG+LLS+C T
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTK 423
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N ++ + HL+E+EP D G YVLL+NIYA GKW++V LR+I++++ ++K G SL
Sbjct: 424 GNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSL 483
Query: 594 VHPGEFASESIV-ENCPP 610
+ E + +N P
Sbjct: 484 IEVNNIVQEFVAGDNSKP 501
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 207/421 (49%), Gaps = 47/421 (11%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE 118
P LQ+++S + E+ +IH ++V GLSQ SF ++++ LC L + + F+ +
Sbjct: 15 PFLQRVKSRN---EWKKIHACIIVHGLSQSSFMVTKMVD-LCDKLGDMDYATRLFNQVSN 70
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-NHYTFPLLGKVCAGIRSLREGK 177
P+ F+ N+I++++ N + + Y++++ K +E + +TFP + K CA + S GK
Sbjct: 71 PNVFLYNSIIRAYTH-NSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGK 129
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH + K G + N+LI MY +++DA KVF++ D+++WNS++ GY +
Sbjct: 130 QVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLG 189
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVG----------DMEAAN------GLFDLMP 281
++ A+ LF M ++ I +W +MISGY +G +M+ A L ++P
Sbjct: 190 QMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 282 -----------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
+ N +I+ Y+K G ++ A F++ ++V+S
Sbjct: 250 SCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVIS 309
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYI 377
W+ +++ Y + F M R KPN + + +L+AC+++G+ G ++
Sbjct: 310 WSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMR 369
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKA 436
Q +I+P + L+ + A+ G ++ A + M K + W S++ G + A
Sbjct: 370 QDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVA 429
Query: 437 L 437
L
Sbjct: 430 L 430
>gi|356555244|ref|XP_003545944.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 521
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/493 (36%), Positives = 274/493 (55%), Gaps = 19/493 (3%)
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I P+ N ++ + F L Y ++++ HNHYTF + C S +
Sbjct: 18 ITNPNPQFLNPLLSQLTNSQNAFFDL---YNQILSHPFSHNHYTFTHALRACYSHHSRSK 74
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
++HA +VK G LDLF++NSL+H Y +V+ A +F P D+V+W S++ G K
Sbjct: 75 ALEIHAHLVKSGHYLDLFLQNSLLHFYLAHNDVVSASNLFRSIPSPDVVSWTSLVSGLAK 134
Query: 236 NREVGFARELFDFMPERDIFTWNSMIS-----------GYVDVGDMEAANGLFDLMPFRD 284
+ A F M + + + G + +G A GL L+ +
Sbjct: 135 SGFEAQALHHFTNMNAKPKIVRPNAATLVAALCACSSLGALGLGKSAHAYGLRMLIFDGN 194
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE-CLRLFDRMI 343
V+ N +++ YAK G + +A+N FD++ R+VVSW LL Y R YCE +F RM+
Sbjct: 195 VIFDNAVLELYAKCGALKNAQNLFDKVFARDVVSWTTLLMGYAR-GGYCEEAFAVFKRMV 253
Query: 344 -RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGV 401
+A+PNEA++++VL+A A++G + +GQW+HSYI + + D + +LL MY KCG
Sbjct: 254 LNAEAEPNEATVVTVLSASASIGALSLGQWVHSYIDSRYDLVVDGNIENALLNMYVKCGD 313
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
M + VFD + K+ +SW ++I G M+G +K LE+F M P+D TFI VLSA
Sbjct: 314 MQMGLRVFDMIVHKDAISWGTVICGLAMNGYEKKTLELFSRMLVEVVEPDDVTFIGVLSA 373
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C+HAG+V EG +F M+ Y I P++ HYGCMVD+ GRAGL+ ++E + +P+EA
Sbjct: 374 CSHAGLVNEGVMFFKAMRDFYGIVPQMRHYGCMVDMYGRAGLLEEAEAFLRSMPVEAEGP 433
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+WGALL AC H N ++ + + HL + + G LLSN+YAS +WD+ +R+ M+
Sbjct: 434 IWGALLQACKIHGNEKMSEWIMGHL-KGKSVGVGTLALLSNMYASSERWDDANKVRKSMR 492
Query: 582 EKELEKAVGSSLV 594
L+K G S V
Sbjct: 493 GTRLKKVAGCSWV 505
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/468 (38%), Positives = 257/468 (54%), Gaps = 45/468 (9%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP-VWDLVTWNSMI 230
SL + K++HA++V G + + LIH Y C + AR VF+ P + + WN MI
Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMI 126
Query: 231 DGYVKN-----------------REVGFARELFDFM------------------------ 249
Y K R + F F+
Sbjct: 127 QAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKD 186
Query: 250 -PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
E DIF NS+++ Y M A +FD MP RDV++W ++ GYA G + AR F
Sbjct: 187 GYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELF 246
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVI 367
D M RN VSW +++A YV + Y E L+ F+ M+ D KPNEA L+S+L+ACA++G +
Sbjct: 247 DMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGAL 306
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D G+WIH YI K RI +ST+L+ MYAKCG +D AR VFD + ++++++W SMI G
Sbjct: 307 DQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGL 366
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
MHG G + L F EM G P+D T + VL+ C+H+G+V EG F M ++ I PK
Sbjct: 367 SMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPK 426
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+EHYGC++DLLGRAG + + E + +PME W ALLSAC H + +LG+ + H+
Sbjct: 427 LEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIA 486
Query: 548 ELEP-RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EL P G YVLLSN+YAS G+W+ V +R+ M ++ E G S +
Sbjct: 487 ELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWI 534
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 205/433 (47%), Gaps = 53/433 (12%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE-P 119
+Q L+ ++ + QIH Q++ GL+Q++ ++ ++S + + FD P
Sbjct: 59 VQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSY-IGCRNLSFARIVFDQFPSLP 117
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFY-YEKMMA--KFVEHNHYTFPLLGKVCAGIRSLRE- 175
+ N +++++ P S Y + +M+A + + YTF + C+ +LR
Sbjct: 118 PTIIWNLMIQAYS--KTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGY 175
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+ VH +VK G+E D+FV NSL++MYS+ ++DA++VF++ P D++TW S++ GY
Sbjct: 176 GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAM 235
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN------ 289
E+ ARELFD MP R+ +W M++GYV A F+ M D V N
Sbjct: 236 RGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVS 295
Query: 290 ----------------------------------CMIDGYAKIGNVTSARNCFDRMCMRN 315
+ID YAK G + AR FD + R+
Sbjct: 296 ILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRD 355
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-H 374
+++W +++ ECL F M+ KP++ +L+ VL C++ G+++ G I H
Sbjct: 356 LLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFH 415
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ- 432
I I P + L+ + + G ++ A +M E +VV+W +++ +HG
Sbjct: 416 DMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDV 475
Query: 433 --GEKALEMFMEM 443
GE+ + E+
Sbjct: 476 DLGERIINHIAEL 488
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 204/652 (31%), Positives = 317/652 (48%), Gaps = 89/652 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L+ CS QIH+Q++V+G + +F A+RV+ + VS + F+ + + F
Sbjct: 879 LQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVS-VYAGFGLVSDAQRVFE-VSPIECFS 936
Query: 124 CNTIMKSFLMLNDPFG----ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ S L N G AL Y +M V + +TFPL+ + CA + S + + V
Sbjct: 937 NLLLWNSILRANVAHGYCEEALEIYC-RMRKLGVSADGFTFPLVIRACALMGSRKLCRSV 995
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV-----WD------------ 222
H +V+ GF+ +L V N L+ MY G + DARKVFE V W+
Sbjct: 996 HGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDC 1055
Query: 223 ------------------LVTWNSMIDGYVKNREVGFARELFDFMPERDI---------- 254
LVTW S++ + + + ELF M R I
Sbjct: 1056 HGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV 1115
Query: 255 -----------------------------FTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
F NS+I Y G++ AA LF + +++
Sbjct: 1116 LSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNI 1175
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDR--------MCMRNVVSWNILLALYVRCKDYCECLR 337
VSWN +I YA +G A F + M NVVSW+ ++ + E L
Sbjct: 1176 VSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 1235
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LF RM K N ++ SVL+ CA + + +G+ IH ++ + + ++L+ L+ MY
Sbjct: 1236 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 1295
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
K G VF+ + K+++SWN+M+ GYG+HG GE A+ F +M K G P+ TF+
Sbjct: 1296 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 1355
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
VLSAC+HAG+V EG FD M + +++EP++EHY CMVDLLGRAGL++++ ++V +P+E
Sbjct: 1356 VLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE 1415
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
+WGALL++C H N+E+ + A + L G Y+LLSNIYA+ G+W++ +R
Sbjct: 1416 PNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVR 1475
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
K K L+K G S + + N VY +L ++G QM++
Sbjct: 1476 ISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEV 1527
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVID-------------IGQWIHSYIQKCRIKPDVL 387
R+I PN + +S++ N V+D + Q IHS I
Sbjct: 846 RLISISFLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAF 905
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEK---NVVSWNSMIMGYGMHGQGEKALEMFMEME 444
L+ ++++YA G++ A+ VF+ + N++ WNS++ HG E+ALE++ M
Sbjct: 906 LAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMR 965
Query: 445 KRGPTPNDATFICVLSACTHAG 466
K G + + TF V+ AC G
Sbjct: 966 KLGVSADGFTFPLVIRACALMG 987
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 281/495 (56%), Gaps = 8/495 (1%)
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y+ +M VE++ YTF + K CA +L G+++HA+ +K GF++ FV N+L MY+
Sbjct: 204 YFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYN 263
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG++ +FE + D+V+W ++I V+ + A + F M E D+ +T+ +
Sbjct: 264 KCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAA 323
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSW----NCMIDGYAKIGNVTSARNCFDRMCMRN 315
+ISG ++ +E L L+ + + N ++ YAK G +TS+ F M R+
Sbjct: 324 VISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+VSW+ ++A Y + E L M KP E +L SVL+AC NM +++ G+ +H+
Sbjct: 384 IVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHA 443
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
Y+ ++ ++ ++L+ MY KCG ++ A +FD ++VSW +MI GY HG +
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSRE 503
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
+++F ++ + G P+ TFI VLSAC+HAG+V G+ YF+ M + Y+I P EHYGCM+
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMI 563
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLL RAG + D+E ++ +P +W LL AC H + E G+ A+ +++LEP G
Sbjct: 564 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAG 623
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
++ L+NIYAS+GKW E ++R++MK K + K G S + + + + +
Sbjct: 624 THITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGED 683
Query: 616 VYSMLGEIGAQMKMC 630
+Y+ML + ++ ++
Sbjct: 684 IYNMLDLLASRTELA 698
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 16/371 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + + D T++ ++ ND AL + + + + + L K C
Sbjct: 72 FDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSD 131
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ G+ +H VK G +FV ++L+ MY+ G++ + R+VF + P+ ++V+W ++I G
Sbjct: 132 VNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITG 191
Query: 233 YVK---NRE-VGFARELFDFMPERDIFTWNSMISGYVDVGDM--------EAANGLFDLM 280
V+ N+E + + E++ E D +T+ + D G + +A FD+
Sbjct: 192 LVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVS 251
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
F N + Y K G + F++M MR+VVSW ++ V+ ++ F
Sbjct: 252 SFVA----NTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
RM D PNE + +V++ CAN+ I+ G+ +H+ I + + + S++TMYAKCG
Sbjct: 308 RMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCG 367
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ + +F MT +++VSW+++I GY G +A E+ M GP P + VLS
Sbjct: 368 QLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLS 427
Query: 461 ACTHAGMVLEG 471
AC + ++ G
Sbjct: 428 ACGNMAILEHG 438
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM- 280
DL N + VK +G AR +FD M ++D +W ++ISGYV+ D A LF M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 281 --------PF-------------------------------RDVVSWNCMIDGYAKIGNV 301
PF V + ++D Y K G +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
R F M MRNVVSW ++ VR E L F M R + + + L AC
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A+ G ++ G+ IH+ K ++ +L TMY KCG ++ +F+ M+ ++VVSW
Sbjct: 228 ADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWT 287
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
++I GQ E A++ F+ M + +PN+ TF V+S C +
Sbjct: 288 TIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCAN 330
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 152/363 (41%), Gaps = 26/363 (7%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM- 342
D+ N + K G++ +AR FD+M ++ +SW L++ YV D E L LF M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ + + L AC ++ G+ +H Y K + V + ++LL MY K G +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
R VF M +NVVSW ++I G G ++AL F EM + + TF L AC
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227
Query: 463 THAGMVLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
+G + G + M++ + + V + + + + G + L K+ M
Sbjct: 228 ADSGALNYGREIHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVV 284
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
W +++ E Q + + D P N Y NL RI
Sbjct: 285 SWTTIITTLVQMGQEECA---VQAFIRMRESDVSP-----NEYTFAAVISGCANLARIEW 336
Query: 582 EKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQ----MKMCRRDVASQ 637
++L + +H G AS S VEN +Y+ G++ + +M RRD+ S
Sbjct: 337 GEQLHALI----LHLGLAASLS-VENSI----MTMYAKCGQLTSSSVIFHEMTRRDIVSW 387
Query: 638 ISI 640
+I
Sbjct: 388 STI 390
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 288/540 (53%), Gaps = 70/540 (12%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ + QIH L +GL F ++L+ L + + FD I +P ++ N ++
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQ-----LPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+F + P Y + M ++ N Y+F L CA
Sbjct: 56 TFSSIGHPHRCWLLYCQ-MCSQGCSPNQYSFTFLFPACA--------------------- 93
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
SL ++Y G++L + + K+ GFA
Sbjct: 94 -------SLFNVYP--GQMLHSH--------------------FCKS---GFAS------ 115
Query: 250 PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
D+F +++ Y +G + +A LFD MP RD+ +WN +I GYA+ G++ +A F+
Sbjct: 116 ---DMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFN 172
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVID 368
+M +RNV+SW L++ Y + Y + L +F + KPNE S+ SVL AC+ +G +D
Sbjct: 173 KMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALD 232
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGY 427
IG+ I +Y + + +S ++L ++A+CG ++ A+ VFD + +++N+ SWN+MIMG
Sbjct: 233 IGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGL 292
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+HG+ AL+++ +M R P+D TF+ +L ACTH GMV EG F+ M+ +++ PK
Sbjct: 293 AVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPK 352
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+EHYGC+VDLLGRAG ++++ L+ +PM +WG LL ACS H N ELG++ A+ L
Sbjct: 353 LEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLF 412
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
+LEP +PG YV+LSNIYA G W V LR++MK + K G S + G+ E IVE+
Sbjct: 413 KLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVED 472
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 312/578 (53%), Gaps = 19/578 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C T+ + +IH G + F A+ ++ + + ++ FD + D
Sbjct: 225 LKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIH-MYSRFGFTGIARSLFDDMPFRDMGS 283
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + AL ++M + ++ N T + VC + + +H +
Sbjct: 284 WNAMISGLIQNGNAAQALDVL-DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E DLFV N+LI+MY+ G + DARK F+ + D+V+WNS+I Y +N + A
Sbjct: 343 IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAH 402
Query: 244 ELF------DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMI 292
F F P D+ T S+ S D + + + + R DVV N ++
Sbjct: 403 GFFVKMQLNGFQP--DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNE 351
D YAK+G + SA F+ + +++V+SWN L+ Y + E + ++ M + PN+
Sbjct: 461 DMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQ 520
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ +S+L A A++G + G IH + K + DV ++T L+ +Y KCG + A ++F
Sbjct: 521 GTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ 580
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ +++ V+WN++I +G+HG EK L++F EM G P+ TF+ +LSAC+H+G V EG
Sbjct: 581 VPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG 640
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
W F LMQ Y I+P ++HYGCMVDLLGRAG + + + + +P++ ++WGALL AC
Sbjct: 641 KWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACR 699
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H N ELGK + L E++ ++ G YVLLSNIYA+ GKW+ V+ +R + +E+ L+K G
Sbjct: 700 IHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGW 759
Query: 592 SLVHPGEFASESIVENCPPHRKCI-VYSMLGEIGAQMK 628
S + N H KC +Y L + A+MK
Sbjct: 760 STIEVNRKVDVFYTGN-QSHPKCKEIYEELRVLTAKMK 796
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 277/536 (51%), Gaps = 27/536 (5%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H L+V+G Q F ++R L L +L VSLS FD I + D + N+++ +++
Sbjct: 138 LHALLVVAGKVQSIFISTR-LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNG 196
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
A+ +Y+ ++ + + YTFP + K C +L +G+K+H K GF+ ++FV
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVA 253
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----E 251
SLIHMYS G AR +F+D P D+ +WN+MI G ++N A ++ D M +
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSARN 306
+ T S++ +GD+ A L L + D+ N +I+ YAK GN+ AR
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAM-LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
F +M + +VVSWN ++A Y + D F +M +P+ +L+S+ + A
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432
Query: 367 IDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ +H +I ++ + DV++ +++ MYAK G++D A VF+ + K+V+SWN++I
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLIT 492
Query: 426 GYGMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
GY +G +A+E++ ME+ + PN T++ +L A H G + +G + R+ K
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG---MKIHGRVIKT 549
Query: 485 EPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG-KI 541
++ + C++D+ G+ G + D+ L ++P E+ W A++S H ++E K+
Sbjct: 550 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIHGHAEKTLKL 608
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ L E D +V L + + G +E + R+M+ E + SL H G
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ----EYGIKPSLKHYG 660
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 158/390 (40%), Gaps = 90/390 (23%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
K +HA +V G +F+ L+++Y+ G+V +R F+ P D+ WNSMI YV
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 236 NREVGFA--------------RELFDFMP----------ERDI--------FTWN----- 258
N A + + F P R I F WN
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAA 254
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
S+I Y G A LFD MPFRD+ SWN MI G + GN A + D M + +
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI-- 312
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
K N +++S+L C +G I IH Y+
Sbjct: 313 -----------------------------KMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K ++ D+ +S +L+ MYAK G ++ AR F M +VVSWNS+I Y + A
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHG 403
Query: 439 MFMEMEKRGPTPNDATFI-----------CVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
F++M+ G P+ T + C S H ++ GW D++
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG------- 456
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+VD+ + GL+ + ++ +P++
Sbjct: 457 ----NAVVDMYAKLGLLDSAHKVFEIIPVK 482
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 243/420 (57%)
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM 270
A F PV D+ +WN++I G+ +N ++ A +LF MPE++ +W++MISGYV+ GD+
Sbjct: 155 ALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDL 214
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
EAA L+ + + VV M+ GY K G V A F RM ++N+V+WN ++A YV
Sbjct: 215 EAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENC 274
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
+ L++F MI +PN SL SVL C+N+ + +G+ +H + K + D T
Sbjct: 275 RAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACT 334
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
SL++MY KCG +D A +F M K+V+SWN+MI GY HG G KAL +F +M P
Sbjct: 335 SLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKP 394
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+ TF+ V+ AC HAG V G YF M++ + IE K HY C++DLLGRAG + ++ L
Sbjct: 395 DWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSL 454
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
+ ++P + A++G LL AC H N +L + A++L+ L+P YV L+NIYA+ KW
Sbjct: 455 IKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKW 514
Query: 571 DEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC 630
D+V +R++MKE + K G S + E + ++ L E+ +MK+
Sbjct: 515 DQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLA 574
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 38/311 (12%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI-GNVTSARNCFDRM 311
D+ + N I+ +V D+E+A +F+ M R V+WN M+ GY K+ G V A FD++
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
+ VS+NI+L Y+R L F++M D AS ++++ A G +
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDI----ASWNTLISGFAQNGQMQKAF 187
Query: 371 ------------QW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDL 404
W I Y++ ++ V++ T++LT Y K G ++L
Sbjct: 188 DLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVEL 247
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A +F M KN+V+WNSMI GY + + E L++F M + PN + VL C++
Sbjct: 248 AERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSN 307
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+ G + Q + K + C ++ + + G + + +L ++P + +
Sbjct: 308 LSALPLGR---QMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVIS- 363
Query: 523 WGALLSACSTH 533
W A++S + H
Sbjct: 364 WNAMISGYAQH 374
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
LLG C+ + +L G+++H + K D SLI MY CG++ A K+F + P
Sbjct: 302 LLG--CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRK 359
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMI-----SGYVDVG---- 268
D+++WN+MI GY ++ A LFD M + D T+ ++I +G+VD+G
Sbjct: 360 DVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYF 419
Query: 269 -DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
M+ G+ + P V + C+ID + G + A + M
Sbjct: 420 KSMKKEFGI-EAKP----VHYTCVIDLLGRAGRLDEAVSLIKEM 458
>gi|297741134|emb|CBI31865.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 308/582 (52%), Gaps = 63/582 (10%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L + C T++ QIH L+ SGL D F S+V + + V + FD + +
Sbjct: 8 LLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYA---FDFLNQT 64
Query: 120 DAFMC----NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
D + NT++ ++ P A Y + FV + YTFP++ K C ++E
Sbjct: 65 DLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVP-DMYTFPVVLKACTKFLGVQE 123
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G++VH VK GF DL+V+NSL+H YSVCG+ A +VF++ V D+V+W +I GYV+
Sbjct: 124 GEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVR 183
Query: 236 NREVGFARELF---DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSW 288
A LF D +P ++ T+ S++ +G + G+ L+ R +V
Sbjct: 184 TGLFDEAINLFLKMDVVP--NVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVG 241
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++D Y K + AR FD + R++VSW +++ V+CK + L LF M +
Sbjct: 242 NALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVE 301
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ L SVL+ACA++G +D G+W+ YI++ I+ D+ + T+L+ MYAKCG +++A ++
Sbjct: 302 PDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHI 361
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ + +N+ +WN+++ G MHG G +AL+ F M G PN+ TF+ +L+AC H+G+V
Sbjct: 362 FNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLV 421
Query: 469 LEGWWYF-DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
EG YF ++ + + P++EHYGCM+DLL RAGL+ ++
Sbjct: 422 AEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYN------------------ 463
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
G YVLLSNIYA+ +WD+V +RR+MK+K + K
Sbjct: 464 ---------------------------GVYVLLSNIYATNERWDDVTRVRRLMKDKGIRK 496
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
GSS++ A E +V + R ++ +L + Q ++
Sbjct: 497 FPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQWRI 538
>gi|125528817|gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
Length = 565
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/442 (36%), Positives = 261/442 (59%), Gaps = 1/442 (0%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD-LFVRNSLIHMYSVCGEVLDA 211
V +H++ P A +R L G +HA ++ L V N+L+ +Y+ C ++ A
Sbjct: 77 VSPDHFSLPFALNAAASLRLLPLGASLHALALRLALLPGRLPVANALVDLYAKCDDLPAA 136
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
D D V++NS++ + + V A LF MP R +WN+M+ YV+ GD+
Sbjct: 137 HTALADIAAPDAVSFNSLLCAHARLASVPDAESLFAAMPSRTQVSWNAMVVVYVNAGDVS 196
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+A +FD MP RD SW+ +I GY K G++ SAR FDRM +N+V+W ++ Y +
Sbjct: 197 SARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQSGV 256
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E L LF M +P+ A+++ V++A + +G ++ W+ SY+ K RI+ + + T+
Sbjct: 257 PKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVGSYVDKKRIERNDKVLTA 316
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ M+AKCG +D A + F + + + + ++I G HG + AL++F M+ + P+
Sbjct: 317 LVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAKLALQVFERMQAQSVWPD 376
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
TF+ VL+AC+HAG+V +G Y++ M + Y +E + +HY C+VD+LGRAG + ++ E+V
Sbjct: 377 PITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVVDMLGRAGRLEEAFEMV 436
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+PM P GALLSAC TH N E+ +IVA L ELEP + G Y++LSNIYA + +W+
Sbjct: 437 QTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNTGNYIMLSNIYAEKEQWE 496
Query: 572 EVENLRRIMKEKELEKAVGSSL 593
E E +R +M+ + K GSS+
Sbjct: 497 EAERIRSVMRTRVPFKQPGSSM 518
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 312/594 (52%), Gaps = 64/594 (10%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE-- 118
L++C + F +H + SG + F + L + + + FD ++E
Sbjct: 133 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG-LVSMYGRCGAWENARQVFDEMRERG 191
Query: 119 -PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF-VEHNHYTFPLLGKVCAGIRSLREG 176
D N+I+ +++ D A+ + E+M + + + + CA + + G
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMF-ERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 250
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
K+VH ++ G D+FV N+++ MY+ CG + +A KVFE V D+V+WN+M+ GY +
Sbjct: 251 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQI 310
Query: 237 REVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLM------------ 280
A LF+ + E ++ TW+++I+GY G A +F M
Sbjct: 311 GRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTL 370
Query: 281 ----------------------------------PFRDVVSWNCMIDGYAKIGNVTSARN 306
P D++ N +ID Y+K + +AR
Sbjct: 371 VSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARA 430
Query: 307 CFDRMCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACA 362
FD + R+VV+W +L+ + + E L LF +M++ D PN ++ L ACA
Sbjct: 431 MFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACA 490
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVL-LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+G + G+ IH+Y+ + R + +L ++ L+ MY+K G +D AR VFDNM ++N VSW
Sbjct: 491 RLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWT 550
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
S++ GYGMHG+GE+AL++F EM+K G P+ TF+ VL AC+H+GMV +G YF+ M +
Sbjct: 551 SLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKD 610
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+ + P EHY CMVDLL RAG + ++ EL+ +PM+ PA+W ALLSAC ++N ELG+
Sbjct: 611 FGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEY 670
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
A L+ELE + G Y LLSNIYA+ W +V +R +MK ++K G S V
Sbjct: 671 AANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 724
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/538 (27%), Positives = 243/538 (45%), Gaps = 74/538 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV-SLSVLFFDGIQEPDAF 122
C ++ IH QLLV GL D + ++ T S +LSVL F
Sbjct: 36 FHQCKSLASAELIHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVF 92
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N +++ + L L Y +M +HYTFP + K C I S R G VHA
Sbjct: 93 WWNQLIRRSVHLGFLEDVLQLY-RRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAV 151
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE---DGPVWDLVTWNSMIDGYVKNREV 239
+ GFE ++FV N L+ MY CG +AR+VF+ + V DLV+WNS++ Y++ +
Sbjct: 152 VFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDS 211
Query: 240 GFARELFDFMPE----------------------------------------RDIFTWNS 259
A ++F+ M E D+F N+
Sbjct: 212 IRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNA 271
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM----CMRN 315
++ Y G ME AN +F+ M +DVVSWN M+ GY++IG A F+++ N
Sbjct: 272 VVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 331
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+W+ ++A Y + E L +F +M ++PN +L+S+L+ CA G + G+ H
Sbjct: 332 VVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHC 391
Query: 376 YIQKCRIK-------PDVLLSTSLLTMYAKCGVMDLARNVFDNM--TEKNVVSWNSMIMG 426
+ K + D+++ +L+ MY+KC AR +FD + +++VV+W +I G
Sbjct: 392 HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 451
Query: 427 YGMHGQGEKALEMFMEMEKRGP--TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
HG+ +ALE+F +M + PN T C L AC G + F Y +
Sbjct: 452 NAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-----RFGRQIHAYVL 506
Query: 485 EPKVEH-----YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ E C++D+ ++G + + + + G + W +L++ H E
Sbjct: 507 RNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTGYGMHGRGE 563
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 334/657 (50%), Gaps = 94/657 (14%)
Query: 24 QKNLPKTPPK------LWANEPKPKFT---DTDNQRLPIVDLSHPILQKLESCSTVK--- 71
Q N K P K + N P FT + L + ++P+L +++CS +
Sbjct: 173 QANTWKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLL--IQACSIRRSEW 230
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF 131
E Q+H +L G D + + ++ C S+ C+ + +
Sbjct: 231 EAKQVHNHVLKLGFDSDVYVRNTLIN--CFSV--------------------CSNMTDAC 268
Query: 132 LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD 191
+ N+ S + ++A ++E I ++ E K ++ ++ E
Sbjct: 269 RVFNESSVLDSVSWNSILAGYIE---------------IGNVEEAKHIYHQMP----ERS 309
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM-- 249
+ NS+I ++ + G V++A K+F++ D+VTW+++I + +N A F M
Sbjct: 310 IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK 369
Query: 250 -------------------------------------PERDIFTWNSMISGYVDVGDMEA 272
E I N++I Y GD+
Sbjct: 370 IGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMV 429
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A LFD D++SWN MI GY K V +A+ FD M ++VVSW+ +++ Y + +
Sbjct: 430 ARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLF 489
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
E L LF M KP+E +L+SV++ACA + ++ G+W+H+YI++ + +V+L T+L
Sbjct: 490 DETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTL 549
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ MY KCG ++ A VF M EK + +WN++I+G M+G E +L+MF M+K TPN+
Sbjct: 550 IDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNE 609
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF+ VL AC H G+V EG +F M +KI+P V+HYGCMVDLLGRAG ++++EEL++
Sbjct: 610 ITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLN 669
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
++PM A WGALL AC H +SE+G+ V + L+EL+P G +VLLSNIYAS+GKWD+
Sbjct: 670 RMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDD 729
Query: 573 VENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
V +R +M + + K G S++ E + + + ML E+ ++K+
Sbjct: 730 VLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 786
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 236/472 (50%), Gaps = 69/472 (14%)
Query: 91 AASRVLKKLCTSLSSVSLSVLFFDGIQEPDA----FMCNTIMKSFLMLNDPFGALSFYYE 146
+AS +LK + S S S++ F ++ P A ++++ N P A + Y +
Sbjct: 144 SASGLLKLMAPSRKSRSVNKGFLLLMRYPQANTWKMPAKASRRAYIQTNSPHFAFTLY-K 202
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
M++ ++ ++YT+PLL + C+ RS E K+VH ++K GF+ D++VRN+LI+ +SVC
Sbjct: 203 SMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCS 262
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD 266
+ DA +VF + V D V+WNS++ GY++ V A+ ++ MPER I NSMI +
Sbjct: 263 NMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGM 322
Query: 267 VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALY 326
G + A LFD M +D+V+W+ +I CF + M
Sbjct: 323 RGLVVEACKLFDEMLEKDMVTWSALI-------------ACFQQNEM------------- 356
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
Y E +R F M + +E +S L+ACAN+ V+++G+ IHS K + +
Sbjct: 357 -----YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYI 411
Query: 387 LLSTSLLTMYAKCG-------------------------------VMDLARNVFDNMTEK 415
L +L+ MY+KCG ++D A+ +FD+M EK
Sbjct: 412 NLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK 471
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VVSW+SMI GY + ++ L +F EM+ G P++ T + V+SAC + +G W
Sbjct: 472 DVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVH 531
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
++R + V ++D+ + G + + E+ + +E G + W AL+
Sbjct: 532 AYIKR-NGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
>gi|225425734|ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Vitis vinifera]
Length = 597
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 318/594 (53%), Gaps = 32/594 (5%)
Query: 35 WANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASR 94
W+ PK+ T + ++ L LESC+ E Q+H ++ +GL F S+
Sbjct: 16 WSLHHFPKYYSTAPEDQSLISL-------LESCTQTSEICQVHGSMVKTGLVNVPFTLSK 68
Query: 95 VLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE 154
+L +S+ + F+ I P+ FM NT+++ + + + P A ++ + A+ +
Sbjct: 69 LLA---SSIQDTDYAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAF-VVFKGLRAQQMI 124
Query: 155 HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKV 214
+ ++F K CA + G+ +H +V+ G L V+N+L+H Y VCG + DA ++
Sbjct: 125 LDQFSFIPTLKACARELAYETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCGRIGDAHQL 184
Query: 215 FED-GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI-FTWNSMISGYVDVGDMEA 272
F++ P DLV+WN+++ GY++ LF M + + F+ ++ S VGD+
Sbjct: 185 FDEIPPKIDLVSWNTLLGGYLQVPHPTMVTCLFGEMCRKGLKFSTTTISSVLCAVGDLGN 244
Query: 273 ANGLFDLMPF-------RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G L D+ +ID YA G + F ++ ++VV WN L+
Sbjct: 245 ILGGVSLHGHCIKVGFCSDLNVATALIDMYANAGFIDLGHKIFYQVPKKDVVLWNCLIDG 304
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y + E L L M R KPN ++L+ +L+ACA G +G I +Y+++ +I D
Sbjct: 305 YAKSDLLQESLSLLQLMKREQVKPNSSTLVGLLSACAAAGASSVGLCISNYVEEEQIALD 364
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+L T+L+ MY KCG ++ A +VF+ M K+V SW +MI GYG+HGQ + A+ +F ME
Sbjct: 365 AVLGTALVDMYCKCGFLEKAIDVFERMEIKDVKSWTAMISGYGVHGQAKNAIMIFHRMEV 424
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G PN+ TF+ VL+AC+H GMV+EG + + M R Y PKVEHYGCM+DLLGRAGL+
Sbjct: 425 EGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFSPKVEHYGCMIDLLGRAGLLE 484
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ L+ LP+E W ALL+AC + N +LG+ V + L+E+ P +LLS+ YA
Sbjct: 485 EAHNLIKSLPIEGDATGWRALLAACRVYGNVDLGECVKRVLLEIFDEHPTDSILLSSTYA 544
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLV--------HPGEFASESIVENCPPH 611
G+ + ++ I KE+++ K G S++ H E+ S S PPH
Sbjct: 545 IAGRLPDYTRMQEI-KEEKMMKEAGCSVIEMDSHGWEHIREYGSSS---KGPPH 594
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 308/630 (48%), Gaps = 98/630 (15%)
Query: 58 HPILQKLESCS-TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFD 114
H + Q L S + ++ + Q H +L L D+ + +L SLS+ LS+
Sbjct: 3 HALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSS 62
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH--------YTFPLLGKV 166
+ P F ++++ +F A S ++ ++ F H H + P K
Sbjct: 63 HLPHPTLFSFSSLIHAF--------ARSHHFPHVLTTF-SHLHPLRLIPDAFLLPSAIKS 113
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA +R+L G+++HA GF D V +SL HMY C +LDARK+F+ P D+V W
Sbjct: 114 CASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVW 173
Query: 227 NSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
++MI GY + V A+ELF M E ++ +WN M++G+ + G + A G+F +M
Sbjct: 174 SAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLV 233
Query: 283 R--------------------DVVSW-------------------NCMIDGYAKIGNVTS 303
+ DVV + M+D Y K G V
Sbjct: 234 QGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKE 293
Query: 304 ARNCFDRM--------------CMRN---------------------VVSWNILLALYVR 328
FD + RN VV+W ++A +
Sbjct: 294 MSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQ 353
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
E L LF M +PN ++ S++ AC N+ + G+ IH + + I DV +
Sbjct: 354 NGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYV 413
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
++L+ MYAKCG + LAR FD M+ N+VSWN+++ GY MHG+ ++ +EMF M + G
Sbjct: 414 GSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQ 473
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P+ TF CVLSAC G+ EGW ++ M + IEPK+EHY C+V LL R G + ++
Sbjct: 474 KPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAY 533
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
++ ++P E +WGALLS+C H+N LG+I A+ L LEP +PG Y+LLSNIYAS+G
Sbjct: 534 SIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKG 593
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
WDE +R +MK K L K G S + G
Sbjct: 594 LWDEENRIREVMKSKGLRKNPGYSWIEVGH 623
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 259/437 (59%), Gaps = 7/437 (1%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ C L+ GK VH ++ GFE D N LI MY+ CG++L A++VF+ D V
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389
Query: 225 TWNSMIDGYVKNREVGFARELFDFMP-ER--DIFTWNSMISGYVDVGDMEAANGLF-DLM 280
TWNS+I+GY ++ E F M ER D T+ ++S + + D+ G+ D++
Sbjct: 390 TWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVI 449
Query: 281 PF---RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
F +++ N ++D YAK G + F M +++SWN ++A V D +
Sbjct: 450 KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQ 509
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
+ + M P+EA+++ +L C+ + V G+ IH YI K + +V + +L+ MY+
Sbjct: 510 MINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYS 569
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG ++ VF M EK+VV+W ++I +GM+G+G+KAL+ F +ME G P+ FI
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+ AC+H+GMV EG +FD M+ Y +EP++EHY C+VDLL R+GL+ +EE + +PM+
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMK 689
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
+LWGALLSAC N+ + + V++ ++EL D G YVL+SNIYA+ GKWD+V+ +R
Sbjct: 690 PDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVR 749
Query: 578 RIMKEKELEKAVGSSLV 594
MK K L+K GSS +
Sbjct: 750 NSMKTKGLKKEPGSSWI 766
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 243/495 (49%), Gaps = 41/495 (8%)
Query: 31 PPKLWAN-----EPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
PPK +N EP +F L +L+ L S + +H+ ++ SGL
Sbjct: 3 PPKFCSNFNNTPEPSQEF------------LRSSLLKTLSSAKNTPQLRTVHSLIITSGL 50
Query: 86 SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
S + +++ K +S +F + ++ N+I+++ L N F YY
Sbjct: 51 SLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRA-LTHNGLFTQALGYY 109
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
+M K ++ + +TFP + CA I L G VH ++ GFE DL++ N+LI MYS
Sbjct: 110 TEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRF 169
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-------RDIFTWN 258
++ +AR VFE+ D V+WNS+I GY N GF + D + D FT +
Sbjct: 170 VDLDNARYVFEEMSNRDSVSWNSLISGYCSN---GFWEDALDMYHKFRMTGMVPDCFTMS 226
Query: 259 SMI---SGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
S++ + V + A +G+ + + DV+ N ++ Y K + AR F +M ++
Sbjct: 227 SVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+ V+WN ++ Y + + ++LF MI G P+ S+ S + AC G + +G+++H
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVH 345
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
Y+ + D + L+ MYAKCG + A+ VFD K+ V+WNS+I GY G +
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405
Query: 435 KALEMF--MEMEKRGPTPNDATFICVLSACTHAGMVLEG-WWYFDLMQRIYKIEPKVEHY 491
+ LE F M+ME++ P+ TF+ +LS + + +G + D+++ + E ++
Sbjct: 406 EGLESFKMMKMERK---PDSVTFVLLLSIFSQLADINQGRGIHCDVIK--FGFEAELIIG 460
Query: 492 GCMVDLLGRAGLMRD 506
++D+ + G M D
Sbjct: 461 NSLLDVYAKCGEMDD 475
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 166/402 (41%), Gaps = 67/402 (16%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H L+ SG D+ A + +L + + + FD + D+ N+++ +
Sbjct: 344 VHKYLIGSGFECDTVACN-ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ-- 400
Query: 136 DPFGALSFYYE------KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
S YY+ KMM + + TF LL + + + + +G+ +H ++K GFE
Sbjct: 401 ------SGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFE 454
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE--VGF------ 241
+L + NSL+ +Y+ CGE+ D KVF D+++WN++I V + VGF
Sbjct: 455 AELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEM 514
Query: 242 ---------------------------ARELFDFM----PERDIFTWNSMISGYVDVGDM 270
+E+ ++ E ++ N++I Y G +
Sbjct: 515 RTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSL 574
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
E +F M +DVV+W +I + G A F M + V+ ++ ++
Sbjct: 575 ENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634
Query: 331 DYC----ECLRLFDRMIRG-DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ E LR FDRM + +P V+ A G++ + +I +KPD
Sbjct: 635 SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE---EFILSMPMKPD 691
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
L +LL+ G ++A+ V K ++ NS GY
Sbjct: 692 ASLWGALLSACRARGNTNIAQRV-----SKKILELNSDDTGY 728
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 268/481 (55%), Gaps = 40/481 (8%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+HYT+PL K C+ + L G ++H+ + K + +++V +S I MYS CG DA +VF
Sbjct: 122 DHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVF 181
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
D MP RD+ +WN+MI+G+ VG + A
Sbjct: 182 -------------------------------DGMPHRDVVSWNAMIAGFARVGLFDRAIE 210
Query: 276 LFDL-------MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+F MP ++ G AK ++ R FD M + ++SWN +LA+Y
Sbjct: 211 VFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYAN 270
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
+ + + + LF M + + +P+ +L +VL C + +G+ IH I++ + P++LL
Sbjct: 271 NEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLL 330
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+L+ MYA CG + AR +FD M+ ++V+SW S+I YG HG G +A+++F +M +G
Sbjct: 331 ENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGL 390
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P+ F+ VL+AC+HAG++ +G YFD M Y I PK EHY CMVDLLGRAG + ++
Sbjct: 391 EPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAY 450
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+ ++ + +E +WGALL AC HSN ++G + A +L L P G YVLLSN+YA G
Sbjct: 451 DFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAG 510
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPG-EFASESIVENCPPHRKCIVYSMLGEIGAQM 627
+W +V ++R +M K ++K G+S+V G + + I + C P + ++Y L E+ ++
Sbjct: 511 RWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSE-MIYHKLDELLGKI 569
Query: 628 K 628
+
Sbjct: 570 R 570
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRM-IRGDA-KPNEASLMSVLTACANMGVIDIGQW 372
V +N+L+ + + L LF M RG A P+ + L +C+ + +G
Sbjct: 85 TTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQ 144
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IHS + K R+ +V ++ S ++MY++CG + A VFD M ++VVSWN+MI G+ G
Sbjct: 145 IHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGL 204
Query: 433 GEKALEMFME-MEKRGPTPNDATFICVLSACTHA 465
++A+E+F + + +G P+ T +L A +A
Sbjct: 205 FDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNA 238
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 13/222 (5%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAK-FVEHNHYTFPLLGKVCAGIR 171
FD +Q + N ++ + N+ F + +M K VE + T + C +
Sbjct: 250 FDNMQFKELISWNAMLAVYA--NNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELS 307
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+ GK++H I + +L + N+L+ MY+ CG + DAR++F+ D+++W S+I
Sbjct: 308 AFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIIS 367
Query: 232 GYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV- 286
Y K+ A +LF+ M E D + ++++ G + FD M R +
Sbjct: 368 AYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHII 427
Query: 287 ----SWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILL 323
+ CM+D + G + A + M + N W LL
Sbjct: 428 PKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALL 469
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 290/540 (53%), Gaps = 17/540 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C V + ++IH L G D + A+ ++ C + V+ +LF D + D
Sbjct: 160 LKACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILF-DEMPTRDMGS 218
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + AL+ + + T L C G +H+
Sbjct: 219 WNAMISGYCQSGNAKEALT-----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E +LFV N LI +Y+ G + D +KVF+ V DL++WNS+I Y N + A
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 244 ELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGL--FDLMP---FRDVVSWNCMIDG 294
LF M + D T S+ S +G++ A + F L D+ N ++
Sbjct: 334 LLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR--GDAKPNEA 352
YAK+G V SAR F+ + ++V+SWN +++ Y + E + +++ M G+ N+
Sbjct: 394 YAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQG 453
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +SVL AC+ G + G +H + K + DV + TSL MY KCG +D A ++F +
Sbjct: 454 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQI 513
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
N V WN++I +G HG GEKA+ +F EM G P+ TF+ +LSAC+H+G+V EG
Sbjct: 514 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGE 573
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
W F++MQ Y I P ++HYGCMVDL GRAG + + + +P++ ++WGALLSAC
Sbjct: 574 WCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRV 633
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N +LGKI ++HL E+EP G +VLLSN+YAS GKW+ V+ +R I K L K G S
Sbjct: 634 HGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWS 693
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 274/542 (50%), Gaps = 23/542 (4%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNT 126
C+ ++ +H +L+VS Q+ +++++ C L +V+L+ FD I D + N
Sbjct: 64 CTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCY-LGNVALARYTFDHIHNRDVYAWNL 122
Query: 127 IMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC 186
++ + + + M++ ++ ++ TFP + K C R++ +G K+H +K
Sbjct: 123 MISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKF 179
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
GF D++V SLIH+Y G V++AR +F++ P D+ +WN+MI GY ++ A L
Sbjct: 180 GFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS----WNCMIDGYAKIGNVT 302
D + D T S++S + GD + + S N +ID YA+ G++
Sbjct: 240 DGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLK 299
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+ FDRM +R+++SWN ++ Y + + LF M +P+ +L+S+ + +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILS 359
Query: 363 NMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+G I + + + ++K D+ + +++ MYAK G++D AR VF+ + K+V+SWN
Sbjct: 360 QLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWN 419
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGP--TPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
++I GY +G +A+EM+ ME+ G + N T++ VL AC+ AG + +G L
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG---MKLHG 476
Query: 480 RIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
R+ K ++ + + D+ G+ G + D+ L ++P W L++ H + E
Sbjct: 477 RLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGE 535
Query: 538 LGKIVAQHLME--LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
++ + +++ ++P D +V L + + G DE E +M + + + SL H
Sbjct: 536 KAVMLFKEMLDEGVKP-DHITFVTLLSACSHSGLVDEGEWCFEMM---QTDYGITPSLKH 591
Query: 596 PG 597
G
Sbjct: 592 YG 593
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 281/495 (56%), Gaps = 8/495 (1%)
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y+ +M VE++ YTF + K CA +L G+++HA+ +K GF++ FV N+L MY+
Sbjct: 204 YFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYN 263
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG++ +FE + D+V+W ++I V+ + A + F M E D+ +T+ +
Sbjct: 264 KCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAA 323
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSW----NCMIDGYAKIGNVTSARNCFDRMCMRN 315
+ISG ++ +E L L+ + + N ++ YAK G +TS+ F M R+
Sbjct: 324 VISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+VSW+ ++A Y + E L M KP E +L SVL+AC NM +++ G+ +H+
Sbjct: 384 IVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHA 443
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
Y+ ++ ++ ++L+ MY KCG ++ A +FD ++VSW +MI GY HG +
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSRE 503
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
+++F ++ + G P+ TFI VLSAC+HAG+V G+ YF+ M + Y+I P EHYGCM+
Sbjct: 504 VIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMI 563
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLL RAG + D+E ++ +P +W LL AC H + E G+ A+ +++LEP G
Sbjct: 564 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAG 623
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
++ L+NIYAS+GKW E ++R++MK K + K G S + + + + +
Sbjct: 624 THITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGED 683
Query: 616 VYSMLGEIGAQMKMC 630
+Y+ML + ++ ++
Sbjct: 684 IYNMLDLLASRTELA 698
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 16/371 (4%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + + D T++ ++ ND AL + + + + + L K C
Sbjct: 72 FDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSD 131
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ G+ +H VK G +FV ++L+ MY+ G++ + R+VF + P+ ++V+W ++I G
Sbjct: 132 VNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITG 191
Query: 233 YVK---NRE-VGFARELFDFMPERDIFTWNSMISGYVDVGDM--------EAANGLFDLM 280
V+ N+E + + E++ E D +T+ + D G + +A FD+
Sbjct: 192 LVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVS 251
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
F N + Y K G + F++M MR+VVSW ++ V+ ++ F
Sbjct: 252 SFVA----NTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
RM D PNE + +V++ CAN+ I+ G+ +H+ I + + + S++TMYAKCG
Sbjct: 308 RMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCG 367
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ + +F MT +++VSW+++I GY G +A E+ M GP P + VLS
Sbjct: 368 QLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLS 427
Query: 461 ACTHAGMVLEG 471
AC + ++ G
Sbjct: 428 ACGNMAILEHG 438
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM- 280
DL N + VK +G AR +FD M ++D +W ++ISGYV+ D A LF M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 281 --------PF-------------------------------RDVVSWNCMIDGYAKIGNV 301
PF V + ++D Y K G +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
R F M MRNVVSW ++ VR E L F M R + + + L AC
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A+ G ++ G+ IH+ K ++ +L TMY KCG ++ +F+ M+ ++VVSW
Sbjct: 228 ADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWT 287
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
++I GQ E A++ F+ M + +PN+ TF V+S C +
Sbjct: 288 TIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCAN 330
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 152/363 (41%), Gaps = 26/363 (7%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM- 342
D+ N + K G++ +AR FD+M ++ +SW L++ YV D E L LF M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ + + L AC ++ G+ +H Y K + V + ++LL MY K G +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
R VF M +NVVSW ++I G G ++AL F EM + + TF L AC
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227
Query: 463 THAGMVLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
+G + G + M++ + + V + + + + G + L K+ M
Sbjct: 228 ADSGALNYGREIHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVV 284
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
W +++ E Q + + D P N Y NL RI
Sbjct: 285 SWTTIITTLVQMGQEECA---VQAFIRMRESDVSP-----NEYTFAAVISGCANLARIEW 336
Query: 582 EKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQ----MKMCRRDVASQ 637
++L + +H G AS S VEN +Y+ G++ + +M RRD+ S
Sbjct: 337 GEQLHALI----LHLGLAASLS-VENSI----MTMYAKCGQLTSSSVIFHEMTRRDIVSW 387
Query: 638 ISI 640
+I
Sbjct: 388 STI 390
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 326/651 (50%), Gaps = 80/651 (12%)
Query: 57 SHPILQKLESC---STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
S P + L+ C + ++ +H +L+ + ++ F +R++ + + + F
Sbjct: 24 SSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLID-VYGKCGYLDYARKVF 82
Query: 114 DGIQEPDAFMCNTIMKSFL---MLNDPFGALSFYYEK-------MMAKFVEH-------- 155
D + E + F N+I+ + + +++ S EK M+A F +H
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 156 ------------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
N Y+F C+ ++ L+ G ++H I K + LD+F+ + LI YS
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE------------ 251
CG V AR+VF+ ++V+WN +I Y +N A E F M E
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 252 ----------------------------RDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
D+ N+++ Y G + A +FD MP R
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+ VS M+ GYAK +V +AR+ F + +++VSWN L+A Y + + E L LF +
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMYA 397
R P + ++L A AN+ +++G+ HS++ K + PD+ + SL+ MY
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG ++ VF+NM EK+ VSWN+MI+GY +G G +ALE+F +M + G P+ T I
Sbjct: 443 KCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIG 502
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
L AC+HAG+V EG YF M + + + P +HY CMVDLLGRAG + ++++L+ +P +
Sbjct: 503 TLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQ 562
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
+W +LLSAC H N LGK VA+ + E++P GPYVLL+N+Y+ G+W + ++R
Sbjct: 563 PDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVR 622
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
++M+ + + K G S + +V++ +K +YS+L + M+
Sbjct: 623 KLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMR 673
>gi|297803844|ref|XP_002869806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315642|gb|EFH46065.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 852
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 308/560 (55%), Gaps = 40/560 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQ-DSFAASRVL---KKLCTSLSSVSLSVLF-FDGIQE 118
LE C +++ Q+H QL+V+ + + + L K+ ++ + +L F +
Sbjct: 268 LERCVVIQQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNVVNYVKRILHGFKSSKG 327
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
D+F +++ FL + F Y +M + + + + + C + + +GK
Sbjct: 328 MDSFSWGCLVR-FLSQHRKFKETVGVYIEMHYSGIPPSSHAITSVLRACGKMEDMVDGKP 386
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HA+ +K G ++V+ L+ +YS G + A+KVF+D + V+WNS++ GY+++
Sbjct: 387 IHAQALKNGLCGCVYVQTGLVGLYSRFGYIEMAKKVFDDIAEKNTVSWNSLLHGYLESGN 446
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL---------------------- 276
+ AR +FD +PE+D+ +WN +IS Y GDM A L
Sbjct: 447 LDEARRVFDKIPEKDVVSWNLIISSYAKKGDMSNACSLFLTMPLKSSATWNILIGGYVNC 506
Query: 277 ---------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
FD MP ++ VSW MI GY K+G+V SA F +M ++ + ++ ++A Y
Sbjct: 507 REMKLARTYFDTMPQKNSVSWITMISGYTKLGDVQSAEKLFRQMSRKDKLVYDAMIACYA 566
Query: 328 RCKDYCECLRLFDRMIR--GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ + L+LF +M+ D +P+E +L SV++A + +G G W+ SYI + IK D
Sbjct: 567 QNGKPKDALKLFSQMLESNSDIQPDEITLSSVVSASSQLGDTSFGTWVESYITEHGIKID 626
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
LLSTSL+ +Y K G A +F+++ +K+ VS+++MIMG G++G +A +F EM +
Sbjct: 627 DLLSTSLIDLYMKGGDFAKAFKLFNDLIKKDTVSYSAMIMGCGINGMATEANCLFREMIE 686
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
+ PN TF +LSA +H+G+V EG+ F+ M+ + +EP +HYG MVD+LGRAG +
Sbjct: 687 KKIPPNLVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLE 745
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ EL+ +PM+ +WGALL A H+N E G+I H ++LE G L+NIY
Sbjct: 746 EAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLANIYT 805
Query: 566 SEGKWDEVENLRRIMKEKEL 585
S G+WD+ N+R M+EK+L
Sbjct: 806 SVGRWDDARNVRDSMEEKKL 825
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 257/466 (55%), Gaps = 43/466 (9%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSV---CGEVLDARKVFEDGPVWDLVTWNS 228
S+ E + HA I+K G F + LI S + A +F P + WN+
Sbjct: 19 SISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNT 78
Query: 229 MIDGYVKNREVGFARELFDFM------PER------------------------------ 252
+I Y + A +F M P++
Sbjct: 79 IIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138
Query: 253 ---DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT-SARNCF 308
D+F N++I Y G +E A L D M RDVVSWN ++ YA+ G + ++R F
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVF 198
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
++NVVSWN ++ Y + E L LF+ M KP+ +L+SVL+ACA++G +
Sbjct: 199 GETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALS 258
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+W+H+YI K I D ++T+L+ MY+KCG ++ A VF++ K++ +WNS+I G
Sbjct: 259 QGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLS 318
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG G+ AL++F EM G PN+ TF+CVLSAC+ AG++ EG F+LM ++ I+P +
Sbjct: 319 THGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTI 378
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHYGCMVDLLGR GL+ ++EELV K+P + +W +LL AC H N EL + VAQ L+E
Sbjct: 379 EHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLE 438
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L P++ +V LSN+YAS G+W +V +R+ M+ + + K G S++
Sbjct: 439 LSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMI 484
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 210/439 (47%), Gaps = 45/439 (10%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS--LSSVSLSVLFFDGI 116
PIL E +++ E HQ H +L SGL +FAASR++ + T+ ++ + F I
Sbjct: 9 PILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRI 68
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P+++M NTI++++ P AL+ +++ + A + + YTF K C + EG
Sbjct: 69 PNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLP-DKYTFTFALKSCGSFSGVEEG 127
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+++H ++K G DLF++N+LIH+Y+ CG + DAR + + D+V+WN+++ Y +
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 237 REVGFA-RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC----- 290
+ A R +F P +++ +WN+MI+GY G LF+ M V NC
Sbjct: 188 GLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSV 247
Query: 291 ----------------------------------MIDGYAKIGNVTSARNCFDRMCMRNV 316
++D Y+K G++ A F+ +++
Sbjct: 248 LSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDI 307
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
+WN +++ L++F M+ KPNE + + VL+AC+ G++D G+ + +
Sbjct: 308 STWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNL 367
Query: 377 IQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV-VSWNSMIMGYGMHGQGE 434
+ I+P + ++ + + G+++ A + M +K V W S++ HG E
Sbjct: 368 MVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVE 427
Query: 435 KALEMFMEMEKRGPTPNDA 453
A + ++ + P + +
Sbjct: 428 LAERVAQKLLELSPQESSS 446
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 311/578 (53%), Gaps = 19/578 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C T+ + +IH G + F A+ ++ + + ++ FD + D
Sbjct: 225 LKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIH-MYSRFGFTGIARSLFDDMPFRDMGS 283
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + AL ++M + ++ N T + VC + + +H +
Sbjct: 284 WNAMISGLIQNGNAAQALDVL-DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E DLFV N+LI+MY+ G + DARK F+ + D+V+WNS+I Y +N + A
Sbjct: 343 IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAH 402
Query: 244 ELF------DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMI 292
F F P D+ T S+ S D + + + + R DVV N ++
Sbjct: 403 GFFVKMQLNGFQP--DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNE 351
D YAK+G + SA F+ + +++V+SWN L+ Y + E + ++ M + PN+
Sbjct: 461 DMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQ 520
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ +S+L A A++G + G IH + K + DV ++T L+ +Y KCG + A ++F
Sbjct: 521 GTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ 580
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ +++ V+WN++I +G+HG EK L++F EM G P+ TF+ +LSAC+H+G V EG
Sbjct: 581 VPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG 640
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
W F LMQ Y I+P ++HYGCMVDLLGRAG + + + +P++ ++WGALL AC
Sbjct: 641 KWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACR 699
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H N ELGK + L E++ ++ G YVLLSNIYA+ GKW+ V+ +R + +E+ L+K G
Sbjct: 700 IHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGW 759
Query: 592 SLVHPGEFASESIVENCPPHRKCI-VYSMLGEIGAQMK 628
S + N H KC +Y L + A+MK
Sbjct: 760 STIEVNRKVDVFYTGN-QSHPKCKEIYEELRVLTAKMK 796
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 277/536 (51%), Gaps = 27/536 (5%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H L+V+G Q F ++R L L +L VSLS FD I + D + N+++ +++
Sbjct: 138 LHALLVVAGKVQSIFISTR-LVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNG 196
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
A+ +Y+ ++ + + YTFP + K C +L +G+++H K GF+ ++FV
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFVA 253
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----E 251
SLIHMYS G AR +F+D P D+ +WN+MI G ++N A ++ D M +
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSARN 306
+ T S++ +GD+ A L L + D+ N +I+ YAK GN+ AR
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAM-LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
F +M + +VVSWN ++A Y + D F +M +P+ +L+S+ + A
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432
Query: 367 IDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ +H +I ++ + DV++ +++ MYAK G++D A VF+ + K+V+SWN++I
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLIT 492
Query: 426 GYGMHGQGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
GY +G +A+E++ ME+ + PN T++ +L A H G + +G + R+ K
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG---MRIHGRVIKT 549
Query: 485 EPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG-KI 541
++ + C++D+ G+ G + D+ L ++P E+ W A++S H ++E K+
Sbjct: 550 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIHGHAEKTLKL 608
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ L E D +V L + + G +E + R+M+ E + SL H G
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ----EYGIKPSLKHYG 660
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 162/402 (40%), Gaps = 91/402 (22%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
K +HA +V G +F+ L+++Y+ G+V +R F+ P D+ TWNSMI YV
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 236 NREVGFA--------------RELFDFMP----------ERDI--------FTWN----- 258
N A + + F P R I F WN
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAA 254
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
S+I Y G A LFD MPFRD+ SWN MI G + GN A + D M + +
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI-- 312
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
K N +++S+L C +G I IH Y+
Sbjct: 313 -----------------------------KMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K ++ D+ +S +L+ MYAK G ++ AR F M +VVSWNS+I Y + A
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHG 403
Query: 439 MFMEMEKRGPTPNDATFI-----------CVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
F++M+ G P+ T + C S H ++ GW D++
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG------- 456
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+VD+ + GL+ DS V ++ + W L++
Sbjct: 457 ----NAVVDMYAKLGLL-DSAHKVFEIILVKDVISWNTLITG 493
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 286/539 (53%), Gaps = 51/539 (9%)
Query: 93 SRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK------SFLMLNDPFGALSFYYE 146
+R L L + S+ + FD + P +C T++ S L D F +L
Sbjct: 22 TRPLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGS 81
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+ V PL+ K CA + + R+GK+VH + G D+FV+ +L+ Y+ G
Sbjct: 82 DVPPGCV-------PLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNG 134
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD 266
++ A KVF++ PV D + N +I GY K+ +V AR LFD M R +WNSMI+ Y
Sbjct: 135 DMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAH 194
Query: 267 VGDMEAANGLFDLM--------------------------------------PFRDVVSW 288
G+ + A LF M ++++
Sbjct: 195 GGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVH 254
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+++ Y K + AR FDRM R+VV+W+ ++A Y + E L LF+RM K
Sbjct: 255 TALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCK 314
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PNE +L+ VL+ACA +G ++G I S+++ + L ++L+ MY KCG + AR+V
Sbjct: 315 PNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSV 374
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ M K V++WNSM+ G ++G + A+ ++ EM + PN+ TF+ +L+ACTHAG+V
Sbjct: 375 FNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLV 434
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
+G +F M+ I+ + P+VEH C+VDLL ++G +R++ + + + +E +W LLS
Sbjct: 435 DQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLS 494
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H++ EL K+ A L+ LEP + YVLLSNIYA G W +V +R +M+ K ++K
Sbjct: 495 ACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQK 553
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/469 (38%), Positives = 278/469 (59%), Gaps = 18/469 (3%)
Query: 176 GKKVHARIVKCG-FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+++H ++ G F D F ++L+HMY+ C +DARK F++ P + V +M GYV
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 235 KNREVGFARELF---------DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-D 284
+N V + LF + E S + D G + + L D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 285 VVSWNCMIDGYAKIG--NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
N M+D YAK G ++ +AR FD M ++VVSWN ++ALY + + L L+ +M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 343 --IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+ G K N +L ++L ACA+ G I G+ IH+ + + ++ +V + TS++ MY+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+++AR F + EKN++SW++MI GYGMHG G++AL++F EM + G PN TFI VL+
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+HAG++ +G ++++ M++ + IEP VEHYGCMVDLLGRAG + ++ L+ ++ ++
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
A+WGALLSAC H N EL +I A+ L EL+ + G YVLLSNIYA G W +VE +R ++
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526
Query: 581 KEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
K + +EK G S V G + + P K I YS LG++ +M+
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEI-YSYLGKLLEKMQ 574
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 19/265 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H ++ +GL D+ + +L + + FD + E D N+++ +
Sbjct: 214 SLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQ 272
Query: 134 LNDPFGALSFYYEKM-MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
AL Y + + ++ ++ N T + CA +++ GK +H ++V+ G E ++
Sbjct: 273 NGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENV 332
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
+V S++ MYS CG V ARK F+ ++++W++MI GY + G +E D E
Sbjct: 333 YVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMH---GHGQEALDIFNEM 389
Query: 253 -------DIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGN 300
+ T+ S+++ G ++ ++ M R V + CM+D + G
Sbjct: 390 CRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGC 449
Query: 301 VTSARNCFDRMCMR-NVVSWNILLA 324
+ A M ++ + W LL+
Sbjct: 450 LDEAYGLIKEMKVKPDAAIWGALLS 474
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 284/538 (52%), Gaps = 37/538 (6%)
Query: 61 LQKLESC---STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
L LE+C ++ E +IH L + + DS + L +L S + V L+ FD I
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHK-LTRLYLSCNQVVLARRLFDEIP 70
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P + N I++++ N PF Y M+ V N YT+P + K C+G+ ++ +G
Sbjct: 71 NPSVILWNQIIRAY-AWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H+ G E D+FV +L+ Y+ CG +++A++
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQR------------------------ 165
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
LF M RD+ WN+MI+G G + A L M + + I G
Sbjct: 166 -------LFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Query: 298 IGN-VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
+ AR FD M +RN VSW+ ++ YV E L +F M P+ +++
Sbjct: 219 TCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLG 278
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL AC+++ + G H Y+ D L+ +L+ MY+KCG + AR VF+ M +
Sbjct: 279 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 338
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+VSWN+MI+GYG+HG G +AL +F ++ G P+D TFIC+LS+C+H+G+V+EG +FD
Sbjct: 339 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 398
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M R + I P++EH CMVD+LGRAGL+ ++ + +P E +W ALLSAC H N
Sbjct: 399 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 458
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
ELG+ V++ + L P G +VLLSNIY++ G+WD+ ++R K+ L+K G S +
Sbjct: 459 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWI 516
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 266/501 (53%), Gaps = 30/501 (5%)
Query: 99 LCTSLSSVSLSVLFFDGIQEP----DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE 154
L ++ SS S++ D + +P F N I+ + + D GALS ++ V
Sbjct: 35 LSSTFSSPEPSLVRSDYLTKPSDEDQIFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVS 94
Query: 155 HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKV 214
N LL + + E ++ I E D F N ++ Y G A+
Sbjct: 95 WN----SLLVGISKDPSRMMEAHQLFDEIP----EPDTFSYNIMLSCYVRNGNFEKAQSF 146
Query: 215 FEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
F P D +WN+MI GY + E+ AR LF M E++ +WN+MISGY++ GD+E A
Sbjct: 147 FNRMPFKDAASWNTMITGYARRGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEKAA 206
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLALYVRCKDYC 333
F PFR VV+W MI GY K V A F M ++ N+V+WN +++ YV
Sbjct: 207 HFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPE 266
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ L+LF M+ +PN + L S L C+ + + +G+ IH +
Sbjct: 267 DGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGRQIHQ-----------------I 309
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY KCG + A +F+ M +K+VV+WN+MI GY HG EKAL +F EM P+
Sbjct: 310 VMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDWI 369
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
TF+ VL AC HAG+V G YFD M R Y++EP+ +HY CMVDLLGRAG + ++ +L+
Sbjct: 370 TFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHYTCMVDLLGRAGKVEEALKLIRS 429
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P A++G LL AC H N EL + A+ L+EL+PR+ YV L+NIYAS+ W++V
Sbjct: 430 MPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLELDPRNAAGYVQLANIYASKNLWEDV 489
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
+R+ MKE + K G S +
Sbjct: 490 ARVRKRMKESNVVKVPGYSWI 510
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 206/663 (31%), Positives = 323/663 (48%), Gaps = 92/663 (13%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
++D + +LQ+ CS QIH+Q++V+G + +F A+RV+ + VS +
Sbjct: 33 VLDFFNDLLQQ---CSKSHLSQQIHSQIIVTGSHRSAFLAARVVS-VYAGFGLVSDAQRV 88
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFG----ALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
F+ + + F + S L N G AL Y +M V + +TFPL+ + CA
Sbjct: 89 FE-VSPIECFSNLLLWNSILRANVAHGYCEEALEIYC-RMRKLGVSADGFTFPLVIRACA 146
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV-----WD- 222
+ S + + VH +V+ GF+ +L V N L+ MY G + DARKVFE V W+
Sbjct: 147 LMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNT 206
Query: 223 -----------------------------LVTWNSMIDGYVKNREVGFARELFDFMPERD 253
LVTW S++ + + + ELF M R
Sbjct: 207 MVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRG 266
Query: 254 I---------------------------------------FTWNSMISGYVDVGDMEAAN 274
I F NS+I Y G++ AA
Sbjct: 267 IGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAAR 326
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR--------MCMRNVVSWNILLALY 326
LF + +++VSWN +I YA +G A F + M NVVSW+ ++ +
Sbjct: 327 ILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGF 386
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
E L LF RM K N ++ SVL+ CA + + +G+ IH ++ + + ++
Sbjct: 387 ASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNI 446
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
L+ L+ MY K G VF+ + K+++SWN+M+ GYG+HG GE A+ F +M K
Sbjct: 447 LVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKD 506
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G P+ TF+ VLSAC+HAG+V EG FD M + +++EP++EHY CMVDLLGRAGL+++
Sbjct: 507 GFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQE 566
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ ++V +P+E +WGALL++C H N+E+ + A + L G Y+LLSNIYA+
Sbjct: 567 ASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAA 626
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQ 626
G+W++ +R K K L+K G S + + N VY +L ++G Q
Sbjct: 627 SGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQ 686
Query: 627 MKM 629
M++
Sbjct: 687 MEV 689
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVID-------------IGQWIHSYIQKCRIKPDVL 387
R+I PN + +S++ N V+D + Q IHS I
Sbjct: 8 RLISISFLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAF 67
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEK---NVVSWNSMIMGYGMHGQGEKALEMFMEME 444
L+ ++++YA G++ A+ VF+ + N++ WNS++ HG E+ALE++ M
Sbjct: 68 LAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMR 127
Query: 445 KRGPTPNDATFICVLSACTHAG 466
K G + + TF V+ AC G
Sbjct: 128 KLGVSADGFTFPLVIRACALMG 149
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 310/552 (56%), Gaps = 24/552 (4%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L++C K+ ++H + S + F + + + + S S S + FD ++ +
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171
Query: 121 AFMCNTIMKSFLMLNDPF-GALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
F N I+ ++ N+ F A+S + E + + +++T P + K CAG+ L G+ +
Sbjct: 172 LFQWNAIVSAYTR-NELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDA-RKVFEDGPVWDLVTWNSMIDGYVKNRE 238
H K D+FV N+LI MY CG V +A ++VF+ + +WN+++ GY +N +
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 239 VGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAA---------NGLFDLMPFRDV 285
A +L+ M + D FT S++ + + NGL + PF +
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL-AVDPFIGI 349
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
++ Y G +A+ FD M R++VSWN+++A Y + E + LF +M+
Sbjct: 350 ----SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD 405
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+P E ++M V AC+ + + +G+ +H + K + D+ +S+S++ MYAK G + L+
Sbjct: 406 GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLS 465
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
+ +FD + EK+V SWN +I GYG+HG+G++ALE+F +M + G P+D TF +L AC+HA
Sbjct: 466 QRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHA 525
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V +G YF+ M ++ IEPK+EHY C+VD+LGRAG + D+ L+ ++P + +W +
Sbjct: 526 GLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSS 585
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LLS+C H N LG+ VA L+ELEP P YVL+SN++A GKWD+V +R MK+ L
Sbjct: 586 LLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGL 645
Query: 586 EKAVGSSLVHPG 597
+K G S + G
Sbjct: 646 QKDAGCSWIEVG 657
>gi|115441777|ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|20161377|dbj|BAB90301.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|125573076|gb|EAZ14591.1| hypothetical protein OsJ_04514 [Oryza sativa Japonica Group]
Length = 533
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 261/443 (58%), Gaps = 1/443 (0%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDA 211
V +H++ P A +R L G +HA ++ L V N+L+ +Y+ C ++ A
Sbjct: 77 VSPDHFSLPFALNAAASLRLLPLGASLHALALRLALLPCRLPVANALVDLYAKCDDLPAA 136
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
D D V++NS++ + + V A LF MP R +WN+M+ YV+ GD+
Sbjct: 137 HTALADIAAPDAVSFNSLLCAHARLASVPDAESLFVAMPSRTQVSWNAMVVVYVNAGDVS 196
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+A +FD MP RD SW+ +I GY K G++ SAR FDRM +N+V+W ++ Y +
Sbjct: 197 SARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQSGV 256
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E L LF M +P+ A+++ V++A + +G ++ W+ SY+ K RI+ + + T+
Sbjct: 257 PKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVGSYVDKKRIERNDKVLTA 316
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ M+AKCG +D A + F + + + + ++I G HG + AL++F M+ + P+
Sbjct: 317 LVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAKLALQVFERMQAQSVWPD 376
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
TF+ VL+AC+HAG+V +G Y++ M + Y +E + +HY C+VD+LGRAG + ++ E+V
Sbjct: 377 PITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVVDMLGRAGRLEEAFEMV 436
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+PM P GALLSAC TH N E+ +IVA L ELEP + G Y++LSNIYA + +W+
Sbjct: 437 QTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNTGNYIMLSNIYAEKEQWE 496
Query: 572 EVENLRRIMKEKELEKAVGSSLV 594
E E +R +M+ + K GSS V
Sbjct: 497 EAERIRSVMRTRLPFKQPGSSWV 519
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/563 (33%), Positives = 305/563 (54%), Gaps = 47/563 (8%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H L+V+G Q F ++R L L +L VSLS FD I + D + N+++ +++
Sbjct: 38 LHALLVVAGKVQSIFISTR-LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNG 96
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
A+ +Y+ ++ + + YTFP + K C +L +G+K
Sbjct: 97 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRK----------------- 136
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
IH ++ F+ G W++ S+I Y + G AR LFD MP RD+
Sbjct: 137 ---IHCWA-----------FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 182
Query: 256 TWNSMISGYVDVGDMEAANGLFD-------LMPFRDVVS-WNCMIDGYAKIGNVTSARNC 307
+WN+MISG + G+ A + D M F VVS +D YAK+G + SA
Sbjct: 183 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKV 242
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGV 366
F+ + +++V+SWN L+ Y + E + ++ M + PN+ + +S+L A A++G
Sbjct: 243 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 302
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ G IH + K + DV ++T L+ +Y KCG + A ++F + +++ V+WN++I
Sbjct: 303 LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 362
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
+G+HG EK L++F EM G P+ TF+ +LSAC+H+G V EG W F LMQ Y I+P
Sbjct: 363 HGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKP 421
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
++HYGCMVDLLGRAG + + + + +P++ ++WGALL AC H N ELGK + L
Sbjct: 422 SLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRL 481
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
E++ ++ G YVLLSNIYA+ GKW+ V+ +R + +E+ L+K G S +
Sbjct: 482 FEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTG 541
Query: 607 NCPPHRKCI-VYSMLGEIGAQMK 628
N H KC +Y L + A+MK
Sbjct: 542 N-QSHPKCKEIYEELRVLTAKMK 563
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 316/565 (55%), Gaps = 17/565 (3%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH ++++G+ + +++++ L + + FD + N ++ ++
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSY-ARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRR 83
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
F ALS Y+ +M ++ V + T+ ++ K C LR G++ + V G+ D+FV
Sbjct: 84 GAMFEALSLYH-RMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFV 142
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP---- 250
+++++Y+ CG++ +A +VF+ DLV W +MI G +N G ARE D
Sbjct: 143 GAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQN---GQAREAVDIYRQMHK 199
Query: 251 ---ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD----VVSWNCMIDGYAKIGNVTS 303
E D +I +G + + M +D V+ ++D YAK G++
Sbjct: 200 KRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLEL 259
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F RM +NV+SW+ L++ + + L+L M KP+ SL+SVL AC+
Sbjct: 260 ASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQ 319
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G + +G+ +H YI + R+ D + ST+++ MY+KCG + AR VFD ++ ++ +SWN++
Sbjct: 320 VGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAI 378
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I YG+HG GE+AL +F++M + P+ ATF +LSA +H+G+V +G ++F +M YK
Sbjct: 379 IASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYK 438
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
I+P +HY CMVDLL RAG + +++EL+ + E G A+W ALLS C H +G++ A
Sbjct: 439 IQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAA 498
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
+ ++EL P DPG Y L+SN +A+ +WDEV +R+IMK+ ++K G S++
Sbjct: 499 KKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAF 558
Query: 604 IVENCPPHRKCIVYSMLGEIGAQMK 628
++E+ H+ + +LG++ +MK
Sbjct: 559 LMEDKSHHQYEEIMQVLGKLDYEMK 583
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 206/663 (31%), Positives = 323/663 (48%), Gaps = 92/663 (13%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
++D + +LQ+ CS QIH+Q++V+G + +F A+RV+ + VS +
Sbjct: 33 VLDFFNDLLQQ---CSKSHLSQQIHSQIIVTGSHRSAFLAARVVS-VYAGFGLVSDAQRV 88
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFG----ALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
F+ + + F + S L N G AL Y +M V + +TFPL+ + CA
Sbjct: 89 FE-VSPIECFSNLLLWNSILRANVAHGYCEEALEIYC-RMRKLGVSADGFTFPLVIRACA 146
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV-----WD- 222
+ S + + VH +V+ GF+ +L V N L+ MY G + DARKVFE V W+
Sbjct: 147 LMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNT 206
Query: 223 -----------------------------LVTWNSMIDGYVKNREVGFARELFDFMPERD 253
LVTW S++ + + + ELF M R
Sbjct: 207 MVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRG 266
Query: 254 I---------------------------------------FTWNSMISGYVDVGDMEAAN 274
I F NS+I Y G++ AA
Sbjct: 267 IGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAAR 326
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR--------MCMRNVVSWNILLALY 326
LF + +++VSWN +I YA +G A F + M NVVSW+ ++ +
Sbjct: 327 ILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGF 386
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
E L LF RM K N ++ SVL+ CA + + +G+ IH ++ + + ++
Sbjct: 387 ASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNI 446
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
L+ L+ MY K G VF+ + K+++SWN+M+ GYG+HG GE A+ F +M K
Sbjct: 447 LVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKD 506
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G P+ TF+ VLSAC+HAG+V EG FD M + +++EP++EHY CMVDLLGRAGL+++
Sbjct: 507 GFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQE 566
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ ++V +P+E +WGALL++C H N+E+ + A + L G Y+LLSNIYA+
Sbjct: 567 ASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAA 626
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQ 626
G+W++ +R K K L+K G S + + N VY +L ++G Q
Sbjct: 627 SGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQ 686
Query: 627 MKM 629
M++
Sbjct: 687 MEV 689
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVID-------------IGQWIHSYIQKCRIKPDVL 387
R+I PN + +S++ N V+D + Q IHS I
Sbjct: 8 RLISISFLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAF 67
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEK---NVVSWNSMIMGYGMHGQGEKALEMFMEME 444
L+ ++++YA G++ A+ VF+ + N++ WNS++ HG E+ALE++ M
Sbjct: 68 LAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMR 127
Query: 445 KRGPTPNDATFICVLSACTHAG 466
K G + + TF V+ AC G
Sbjct: 128 KLGVSADGFTFPLVIRACALMG 149
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 286/539 (53%), Gaps = 51/539 (9%)
Query: 93 SRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK------SFLMLNDPFGALSFYYE 146
+R L L + S+ + FD + P +C T++ S L D F +L
Sbjct: 22 TRPLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGS 81
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+ V PL+ K CA + + R+GK+VH + G D+FV+ +L+ Y+ G
Sbjct: 82 DVPPGCV-------PLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNG 134
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD 266
++ A KVF++ PV D + N +I GY K+ +V AR LFD M R +WNSMI+ Y
Sbjct: 135 DMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAH 194
Query: 267 VGDMEAANGLFDLM--------------------------------------PFRDVVSW 288
G+ + A LF M ++++
Sbjct: 195 GGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVH 254
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+++ Y K + AR FDRM R+VV+W+ ++A Y + E L LF+RM K
Sbjct: 255 TALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCK 314
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PNE +L+ VL+ACA +G ++G I S+++ + L ++L+ MY KCG + AR+V
Sbjct: 315 PNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSV 374
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ M K V++WNSM+ G ++G + A+ ++ EM + PN+ TF+ +L+ACTHAG+V
Sbjct: 375 FNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLV 434
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
+G +F M+ I+ + P+VEH C+VDLL ++G +R++ + + + +E +W LLS
Sbjct: 435 DQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLS 494
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC H++ EL K+ A L+ LEP + YVLLSNIYA G W +V +R +M+ K ++K
Sbjct: 495 ACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQK 553
>gi|125540362|gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 253/441 (57%), Gaps = 32/441 (7%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+H + C+ + S VH+ V+ G D++V N+ Y +V A ++F
Sbjct: 70 DHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASAERLF 129
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
+ +R+V D+ TW +M++G+ + GD+E A
Sbjct: 130 SEA-----------------SRDVA------------DVVTWTTMVTGHANAGDVERARW 160
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE- 334
FD MP ++VVSWN M+ YA+ G + AR FDRM RN +W ++ ++ D+CE
Sbjct: 161 FFDAMPEKNVVSWNTMLGAYARAGMLPKARKLFDRMPSRNAATWGSMITGLLQ-SDHCEE 219
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLL 393
LR+F M+ PNE +L+S ++AC + ++ G W+H Y ++ +L+T+++
Sbjct: 220 ALRVFSDMVACGVVPNEPALVSTVSACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIV 279
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY KCG + A VF M +N+ SWNSMI G M+G +AL +F +M+ G PND
Sbjct: 280 DMYGKCGSIRDAVRVFAAMPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDI 339
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
TFI +LSAC+H+G+V EG W F M + I+P EHYG MVDLLGR+G +R++ + V
Sbjct: 340 TFIGLLSACSHSGLVDEGRWLFYKMVNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKS 399
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P+E P LWGAL AC H ELG+ VA+ L+ELEP+ Y+LLSNIYA+ +WD++
Sbjct: 400 MPVEPHPGLWGALAGACKIHGEVELGEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDM 459
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
N+RRI+K++++ K G+++V
Sbjct: 460 ANVRRILKDRKVPKGTGNAIV 480
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 275/516 (53%), Gaps = 47/516 (9%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF--ELDLFVRNSLIHMYSVCGEVLDARK 213
N TF L + C SL + K++H + V G + L++ Y+ G +DA+K
Sbjct: 253 NTQTFYFLLQKCG---SLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 309
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNRE-----------------------------VGFARE 244
VF D+V+W +I Y+ + G ++
Sbjct: 310 VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 369
Query: 245 L----------FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
L F F D N++I Y G +E A +F M +DV SW +++G
Sbjct: 370 LSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNG 429
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK--PNEA 352
+ K ++ +AR FD M MRN VSW ++ YV+ + L LF M R + K P
Sbjct: 430 FIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM-RAEGKDWPTVI 488
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++++VL+ CA++G D+G +H Y+ K + DV ++ +L+ MYAK G + LA +F M
Sbjct: 489 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEM 548
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+++V SW +MI G +HG+G ALE F +M K G PN+ T + VLSAC+HAG+V+EG
Sbjct: 549 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGR 608
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M + + I+PK++HYGCMVDLLGRAGL+R+++EL+ +P++ +W +LLSAC
Sbjct: 609 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLV 668
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N L ++ + ++ELEP D G Y+LL NIY S +W++ R+ M+++ ++K G S
Sbjct: 669 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 728
Query: 593 LVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
V E + E+ + VY++L I QMK
Sbjct: 729 WVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMK 764
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 194/430 (45%), Gaps = 53/430 (12%)
Query: 64 LESCSTVKEFHQIHTQLLVSGL--SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDA 121
L+ C ++++ QIH + + GL S+ A ++L T L S + F+ IQ PD
Sbjct: 261 LQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTY-TQLGSPVDAQKVFNHIQNPDI 319
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV--CAGIRSLREGKKV 179
++ +L + P A S + + +F ++G V C + L G+ V
Sbjct: 320 VSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD---SFCVVGAVSACGHRKDLSNGRIV 376
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H + + D V N+LI MYS G + A VF+ + D+ +W S+++G++K ++
Sbjct: 377 HGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDI 436
Query: 240 GFARELFDFMPERDIFTWNSMISGYVD----------VGDMEAAN--------------- 274
AR +FD MP R+ +W +MI+GYV +M A
Sbjct: 437 EAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSG 496
Query: 275 ----GLFDLMPF-----------RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
G FDL DV N ++D YAK G + A F M R+V SW
Sbjct: 497 CADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSW 556
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+++ L F M + PNE +L+SVL+AC++ G++ G+ + + +
Sbjct: 557 TTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQ 616
Query: 380 CR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GE 434
C IKP + ++ + + G++ A+ + ++M K + V W S++ +HG E
Sbjct: 617 CHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAE 676
Query: 435 KALEMFMEME 444
A +M +E+E
Sbjct: 677 MAGKMIIELE 686
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 243/423 (57%)
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
V A F PV D+ +WN++I G+ +N ++ A +LF MPE++ +W++MISGYV+
Sbjct: 152 VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEH 211
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
GD+EAA L+ + + VV M+ GY K G V A F RM ++N+V+WN ++A YV
Sbjct: 212 GDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYV 271
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ L++F MI +PN SL SVL C+N+ + +G+ +H + K + D
Sbjct: 272 ENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTT 331
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
TSL++MY KCG +D A +F M K+V++WN+MI GY HG G KAL +F +M
Sbjct: 332 ACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGT 391
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P+ TF+ V+ AC HAG V G YF M++ + IE K HY C++DLLGRAG + ++
Sbjct: 392 MKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEA 451
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
L+ ++P A++G LL AC H N +L + A++L+ L+P YV L+NIYA+
Sbjct: 452 VSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAAT 511
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
KWD+V +R++MKE + K G S + E + ++ L E+ +M
Sbjct: 512 NKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKM 571
Query: 628 KMC 630
K+
Sbjct: 572 KLA 574
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 38/311 (12%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI-GNVTSARNCFDRM 311
D+ + N I+ +V D+E+A +F+ M R V+WN M+ GY K+ G V A FD++
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
+ VS+NI+L Y+R L F++M D AS ++++ A G +
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDI----ASWNTLISGFAQNGQMQKAF 187
Query: 371 ------------QW---IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDL 404
W I Y++ ++ V++ T++LT Y K G ++L
Sbjct: 188 DLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVEL 247
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A +F M KN+V+WNSMI GY + + E L++F M + PN + VL C++
Sbjct: 248 AERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSN 307
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+ G + Q + K + C ++ + + G + + +L ++P +
Sbjct: 308 LSALPLGR---QMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRK-DVIT 363
Query: 523 WGALLSACSTH 533
W A++S + H
Sbjct: 364 WNAMISGYAQH 374
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
LLG C+ + +L G+++H + K D SLI MY CG++ A K+F + P
Sbjct: 302 LLG--CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRK 359
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMI-----SGYVDVG---- 268
D++TWN+MI GY ++ A LFD M + D T+ ++I +G+VD+G
Sbjct: 360 DVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYF 419
Query: 269 -DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
M+ G+ + P V + C+ID + G + A + M
Sbjct: 420 KSMKKEFGI-EAKP----VHYTCVIDLLGRAGRLDEAVSLIKEM 458
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 253/435 (58%), Gaps = 1/435 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N L+ G + +AR++FE P ++++W +MI G ++ AR LFD MPER++
Sbjct: 168 NILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVV 227
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MISGY ++ A LF MP RDV SWN MI G+ + ++ A+ FD M RN
Sbjct: 228 SWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRN 287
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VVSW ++ ++ + L++F+ M+ +PN+ + + + A +N+ + GQ +H
Sbjct: 288 VVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQ 347
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
I K + D + +SL+ +YAKCG + LAR VFD EK+V+SWN MI Y HG G +
Sbjct: 348 MICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVE 407
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ ++ +M++ PND T++ +LSAC+H+G+V EG F+ M + I + EHY C++
Sbjct: 408 AIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLI 467
Query: 496 DLLGRAGLMRDSEELVSKLPME-AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
DL RAG + D++ L++ L ++ +W ALL C+ H N +G + A++L+E EP +
Sbjct: 468 DLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNA 527
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
G Y LLSNIYAS GKW E +R M ++ L+K G S + + +
Sbjct: 528 GTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVARDKSHSESE 587
Query: 615 IVYSMLGEIGAQMKM 629
++YS+L +I M+M
Sbjct: 588 LIYSLLQDIHHMMRM 602
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 46/265 (17%)
Query: 188 FELDLFVR----NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
F D F N I + G V DAR++F+ P D+V+W +M+ Y + ++ A
Sbjct: 31 FSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEAS 90
Query: 244 ELFDFMPE--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
L P+ R++ TW +++SGY ++ A LFD MP R+VVSWN M++ YA G +
Sbjct: 91 ALL-HRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRM 149
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
+A FD M +R+ SWNILLA VR E RLF+RM E ++MS
Sbjct: 150 GAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERM-------PERNVMS----- 197
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
W T++++ A+ G D AR +FD M E+NVVSWN
Sbjct: 198 ----------W-----------------TTMISGLARSGSADEARALFDGMPERNVVSWN 230
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKR 446
+MI GY + + ++AL++FM M +R
Sbjct: 231 AMISGYARNLRIDEALDLFMNMPER 255
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 104/258 (40%), Gaps = 48/258 (18%)
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
A +F F V N I A G V AR FDR R+VVSW ++A Y R
Sbjct: 26 GAAAVFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQ 85
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E L R DA+ N V+ T+
Sbjct: 86 LHEASALLH---RPDARRN-----------------------------------VVTWTA 107
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
LL+ YA+ +D AR +FD M E+NVVSWN+M+ Y G+ A +F M P +
Sbjct: 108 LLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGM----PVRD 163
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
++ +L+A +G + E F+ M E V + M+ L R+G ++ L
Sbjct: 164 AGSWNILLAALVRSGTMDEARRLFERMP-----ERNVMSWTTMISGLARSGSADEARALF 218
Query: 512 SKLPMEAGPALWGALLSA 529
+P E W A++S
Sbjct: 219 DGMP-ERNVVSWNAMISG 235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG-- 169
FD + + + T+M L N+ AL + M+ + N TF LG V AG
Sbjct: 279 LFDEMPKRNVVSWTTMMNGCLQGNESEMALQVF-NGMLVDGIRPNQVTF--LGAVDAGSN 335
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ L EG++VH I K F+ D F+ +SL+ +Y+ CGE+ ARKVF+ D+++WN M
Sbjct: 336 LAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGM 395
Query: 230 IDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
I Y + A L++ M E + T+ ++S G ++ +F+ M
Sbjct: 396 IAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKS 455
Query: 286 VS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVS--WNILLA 324
++ ++C+ID ++ G + A+ + + ++ S W+ LL
Sbjct: 456 IAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLG 501
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 254/446 (56%), Gaps = 38/446 (8%)
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV-------------- 239
+ SL+ MY+ CG V+D+RKVF+ P + VTWN+MI GY+ N +
Sbjct: 2 IGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRT 61
Query: 240 ---------GF--------ARELFDFMPE--RDIFTWNSMISGYVDVGDMEAANGLFDLM 280
GF AR FD +P R++ TW M+ GY +MEAA +F+ M
Sbjct: 62 AVTWIEMIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGM 121
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P R+ +W+ MI GY K GNV AR+ FDR+ +RN+V+WN L++ Y + E L F
Sbjct: 122 PQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFG 181
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+M +P+E ++ SVL+AC+ +G++D G+ IH + IK + + L+ MYAKCG
Sbjct: 182 KMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCG 241
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ AR +F+ M +N WNSMI G+ +HGQ ++ALE F ME P++ TF+ VLS
Sbjct: 242 DLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLS 301
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC H G V G F M++ Y + ++HYGC++DLLGRAG ++++ +L+ ++P++
Sbjct: 302 ACAHGGFVNAGLEIFSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPND 360
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP----YVLLSNIYASEGKWDEVENL 576
+WGALL AC H + E+ V + +++++ YVLLSNIYA+ +W++ E +
Sbjct: 361 VVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKM 420
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASE 602
R M K +K G S + PG E
Sbjct: 421 RMEMANKGFQKTSGCSSIMPGNNTHE 446
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 9/266 (3%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
+ + F +S+I Y G V +AR +F+ PV +LV WNS+I GY +N A E F
Sbjct: 123 QRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGK 182
Query: 249 MP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV----VSWNCMIDGYAKIGN 300
M E D T S++S +G ++A + +M + + N ++D YAK G+
Sbjct: 183 MQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGD 242
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ +AR F+ M RN WN +++ + E L F RM P+E + +SVL+A
Sbjct: 243 LANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSA 302
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVS 419
CA+ G ++ G I S ++K + + L+ + + G + A ++ M K N V
Sbjct: 303 CAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVV 362
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEK 445
W +++ +H E A + E+ K
Sbjct: 363 WGALLGACRVHLDMEMADRVVEEIVK 388
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 15/266 (5%)
Query: 87 QDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYE 146
++ FA S ++ C +V + FD I + N+++ + AL +
Sbjct: 124 RNFFAWSSMISGYCKK-GNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALE-AFG 181
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
KM A+ E + T + C+ + L GKK+H + G +L+ FV N L+ MY+ CG
Sbjct: 182 KMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCG 241
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMIS 262
++ +AR +FE + WNSMI G+ + + A E F M + D T+ S++S
Sbjct: 242 DLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLS 301
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVS----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVV 317
G + A +F M + + + C+ID + G + A + RM ++ N V
Sbjct: 302 ACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDV 361
Query: 318 SWNILLALYVRCKDYCECLRLFDRMI 343
W LL C+ + + + + DR++
Sbjct: 362 VWGALLGA---CRVHLD-MEMADRVV 383
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
++ TSL+ MYAKCG + +R VFD M E+N V+WN+MI GY +G + A+ +F +M R
Sbjct: 1 MIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIR 60
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
T+I ++ +G +FD + + V + MVD R M
Sbjct: 61 TAV----TWIEMIDGFARSGDTETARRFFDDVPSELR---NVVTWTVMVDGYARNAEMEA 113
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSN 535
+ E+ +P A W +++S N
Sbjct: 114 AREVFEGMPQRNFFA-WSSMISGYCKKGN 141
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 301/551 (54%), Gaps = 48/551 (8%)
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ D ++ NT++ F + ++ A + E + V N L G + G ++ E K
Sbjct: 110 DSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSI---LAGYIEIG--NVEEAK 164
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++ ++ E + NS+I ++ + G V++A K+F++ D+VTW+++I + +N
Sbjct: 165 HIYHQMP----ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNE 220
Query: 238 EVGFARELFDFM---------------------------------------PERDIFTWN 258
A F M E I N
Sbjct: 221 MYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQN 280
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
++I Y GD+ A LFD D++SWN MI GY K V +A+ FD M ++VVS
Sbjct: 281 ALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVS 340
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W+ +++ Y + + E L LF M KP+E +L+SV++ACA + ++ G+W+H+YI+
Sbjct: 341 WSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK 400
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
+ + +V+L T+L+ MY KCG ++ A VF M EK + +WN++I+G M+G E +L+
Sbjct: 401 RNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLD 460
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
MF M+K TPN+ TF+ VL AC H G+V EG +F M +KI+P V+HYGCMVDLL
Sbjct: 461 MFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLL 520
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
GRAG ++++EEL++++PM A WGALL AC H +SE+G+ V + L+EL+P G +V
Sbjct: 521 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHV 580
Query: 559 LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYS 618
LLSNIYAS+GKWD+V +R +M + + K G S++ E + + +
Sbjct: 581 LLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIED 640
Query: 619 MLGEIGAQMKM 629
ML E+ ++K+
Sbjct: 641 MLVEMAMKLKL 651
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 248/481 (51%), Gaps = 68/481 (14%)
Query: 80 LLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL--FFDGIQEPDAFMCNTIMKSFLMLNDP 137
+L++G ++++AASR++K T + + F+ I+ + FM N ++++++ N P
Sbjct: 1 MLLTGFIRETYAASRLIK-FSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSP 59
Query: 138 FGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNS 197
A + Y + M++ ++ ++YT+PLL + C+ RS E K+VH ++K GF+ D++VRN+
Sbjct: 60 HFAFTLY-KSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNT 118
Query: 198 LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTW 257
LI+ +SVC + DA +VF + V D V+WNS++ GY++ V A+ ++ MPER I
Sbjct: 119 LINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIAS 178
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
NSMI + G + A LFD M +D+V+W+ +I CF + M
Sbjct: 179 NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA-------------CFQQNEM---- 221
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
Y E +R F M + +E +S L+ACAN+ V+++G+ IHS
Sbjct: 222 --------------YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLS 267
Query: 378 QKCRIKPDVLLSTSLLTMYAKCG-------------------------------VMDLAR 406
K + + L +L+ MY+KCG ++D A+
Sbjct: 268 LKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAK 327
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+FD+M EK+VVSW+SMI GY + ++ L +F EM+ G P++ T + V+SAC
Sbjct: 328 AIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLA 387
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ +G W ++R + V ++D+ + G + + E+ + +E G + W AL
Sbjct: 388 ALEQGKWVHAYIKR-NGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNAL 445
Query: 527 L 527
+
Sbjct: 446 I 446
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 13/223 (5%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFG-ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D ++++ + ND F L+ + E M+ F + + T + CA +
Sbjct: 330 FDSMPEKDVVSWSSMISGYAQ-NDLFDETLALFQEMQMSGF-KPDETTLVSVISACARLA 387
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L +GK VHA I + G +++ + +LI MY CG V A +VF + TWN++I
Sbjct: 388 ALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALIL 447
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMIS-----GYVDVGDMEAANGLFDLMPF 282
G N V + ++F M + + T+ ++ G VD G + + D
Sbjct: 448 GLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQ 507
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+V + CM+D + G + A +RM M +V +W LL
Sbjct: 508 PNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLG 550
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 267/439 (60%), Gaps = 10/439 (2%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
K C + + +G+ VHA +V F + L ++N +++MY+ CG + DAR++F++ P D+
Sbjct: 95 KECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDM 154
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDL 279
VTW ++I G+ +N A LF M + + FT +S++ ++ L
Sbjct: 155 VTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAF 214
Query: 280 -MPF---RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+ + V + ++D YA+ G++ +A+ FD M ++ VSWN L++ + R +
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHA 274
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L L +M R + +P + SV +ACA++G ++ G+W+H+++ K +K + +LL M
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAK G +D A+ VFD + + +VVSWN+M+ G HG G++ L+ F +M + G PN+ +F
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+CVL+AC+H+G++ EG +YF+LM++ YK+EP V HY VDLLGR GL+ +E + ++P
Sbjct: 395 LCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP 453
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+E A+WGALL AC H N ELG A+ EL+P D GP +LLSNIYAS G+W +V
Sbjct: 454 IEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAK 513
Query: 576 LRRIMKEKELEKAVGSSLV 594
+R++MKE ++K S V
Sbjct: 514 VRKMMKESGVKKQPACSWV 532
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 192/412 (46%), Gaps = 13/412 (3%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
+P +L +L++ V++ +H L+ S + ++ + + +
Sbjct: 84 VPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDAR 143
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD + D ++ F N P AL + +M+ ++ NH+T L K
Sbjct: 144 RMFDEMPTKDMVTWTALIAGFSQNNRPRDAL-LLFPQMLRLGLQPNHFTLSSLLKASGSE 202
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
L G ++HA +K G++ ++V ++L+ MY+ CG + A+ F+ P V+WN++I
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM--PFRD 284
G+ + E A L M ++ FT++S+ S +G +E + M
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLK 322
Query: 285 VVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
++++ N ++D YAK G++ A+ FDR+ +VVSWN +L + E L F++M
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM 382
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+R +PNE S + VLTAC++ G++D G + ++K +++PDV + + + + G++
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442
Query: 403 DLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
D A M E W +++ MH G A E E++ P
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGP 494
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 15/256 (5%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLT 394
L D + RG P+ +L C +G ++ G+ +H+++ + ++L ++
Sbjct: 72 LYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVN 131
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAKCG +D AR +FD M K++V+W ++I G+ + + AL +F +M + G PN T
Sbjct: 132 MYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFT 191
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+L A + G + Y + V +VD+ R G M ++ +
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP-YVLLSNIYAS------- 566
P ++ + W AL+S H+ G+ L +++ ++ P + S+++++
Sbjct: 251 PTKSEVS-WNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGAL 306
Query: 567 -EGKWDEVENLRRIMK 581
+GKW ++ +K
Sbjct: 307 EQGKWVHAHMIKSGLK 322
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/682 (28%), Positives = 324/682 (47%), Gaps = 115/682 (16%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+++ LE+C + Q+H+Q L GL+ DSF ++ L L +S+ + F+
Sbjct: 7 LVKLLETCCSKISITQLHSQCLKVGLALDSFVVTK-LNVLYARYASLCHAHKLFEETPCK 65
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH--NHYTFPLLGKVCAGIRSLREGK 177
++ N +++S+ + LS +++ E ++YT + K C+G++ L GK
Sbjct: 66 TVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGK 125
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN- 236
+H +K + D+FV ++LI +YS CG++ DA KVF + P D+V W S+I GY +N
Sbjct: 126 MIHG-FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNG 184
Query: 237 -----------------------------------REVGFARELFDFMPERDIFT----W 257
+ R + F+ R T
Sbjct: 185 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 244
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR--- 314
NS+++ Y G + A LF MP++D++SW+ M+ YA G T+A N F+ M +
Sbjct: 245 NSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 304
Query: 315 ------------------------------------NVVSWNILLALYVRCKDYCECLRL 338
++ L+ +Y++C + L
Sbjct: 305 LNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIEL 364
Query: 339 FDRMIRGD-------------------------------AKPNEASLMSVLTACANMGVI 367
F+RM + D +P+ +L+ +L A + +G++
Sbjct: 365 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIV 424
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+H+++ K + + SL+ +YAKC +D A VF + +VV+W+S+I Y
Sbjct: 425 QQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAY 484
Query: 428 GMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
G HGQGE+AL++ +M PND TF+ +LSAC+HAG++ EG F +M Y++ P
Sbjct: 485 GFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMP 544
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+EHYG MVDLLGR G + + ++++ +PM+AGP +WGALL AC H N ++G++ A +L
Sbjct: 545 NIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNL 604
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
L+P G Y LLSNIY + W + LR ++KE L+K VG S+V I
Sbjct: 605 FLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIAS 664
Query: 607 NCPPHRKCIVYSMLGEIGAQMK 628
+ +Y ML ++ A+M+
Sbjct: 665 DRFHGESDQIYEMLRKLDARMR 686
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 272/526 (51%), Gaps = 76/526 (14%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH---YTFPLLGKVCAGIRSLR------E 175
N ++ + +P A + + A E YT P K CA + + E
Sbjct: 72 NALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLRE 131
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G++VHA K GF L VRN+L+ +Y VCGE DAR+V
Sbjct: 132 GRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRV--------------------- 170
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA---NGLFDLMP----------- 281
FD M RD+ +W +++S +V G A G D++P
Sbjct: 171 ----------FDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQMDVVPNEGTLACVLVA 220
Query: 282 ---------FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
+ V W N ++D Y K + AR FDR+ +R+V+SW
Sbjct: 221 CGRLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISW 280
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
I+++ V+CK + L +F+ M + KP++ L +VL+AC ++G ++ G+W+H YI++
Sbjct: 281 TIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIER 340
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
I+ DV + TSL+ MYAKCG ++ + ++F M KN+ SWN++I G+ +HG G +ALE
Sbjct: 341 KGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEH 400
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
F M G PN+ +FI VL AC H+G+V EG F+ M+ YK+ P EHYG +VDLLG
Sbjct: 401 FDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLG 460
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
RAGL+ ++ + +PM WGALLSAC H + + + +H+ ELE + G Y L
Sbjct: 461 RAGLIHEAYSVTKAMPMRPAVFTWGALLSACQAHRQVDFSQQILRHVHELESSESGVYAL 520
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
LSNIYA +W +V+ +R +M EK L+K GSS++ SE +V
Sbjct: 521 LSNIYAVNHRWADVKRVRGLMSEKGLQKEPGSSVIEVNGKTSEFVV 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 15/224 (6%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + D ++ + P AL + E M V+ + + C + +
Sbjct: 269 FDRLLVRDVISWTIMISGLVQCKLPSKALEVFNE-MQKSRVKPDKVVLSTVLSACTSLGA 327
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G+ VH I + G E D+ V SL+ MY+ CG + + +F P+ +L +WN++I+G
Sbjct: 328 LESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALING 387
Query: 233 YVKNREVGFARELFDFMPERD---------IFTWNSMISGYVDVG--DMEAANGLFDLMP 281
+ + A E FD M I SG V G E+ + L P
Sbjct: 388 FALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSP 447
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV-SWNILLA 324
+ + + ++D + G + A + M MR V +W LL+
Sbjct: 448 WEE--HYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLS 489
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 301/581 (51%), Gaps = 43/581 (7%)
Query: 93 SRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK--SFLMLNDPFGALSFYYEKMMA 150
+R L L ++ S+ + FD + P A +C + S L L+ F + +
Sbjct: 111 TRPLHALLSNASTYRAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGG 170
Query: 151 KFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD 210
PL+ K CA + +G + H + G D+FV+ +L+ Y+ G++
Sbjct: 171 AIPSG---CIPLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDS 227
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM 270
A F++ PV D + N +I GY K+ +V AR LFD MP R +WNSMI+ Y G+
Sbjct: 228 ALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEF 287
Query: 271 EAANGLFDLM--------------------------------------PFRDVVSWNCMI 292
A LFD M ++V+ ++
Sbjct: 288 REALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQNVIVHTALM 347
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+ Y K + AR+ FDRM R+VV+W+ ++A Y + E L LF+RM + KPNE
Sbjct: 348 EMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEV 407
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+ VL+ACA +G ++G+ I +YI+ + L ++L+ MY KCG + AR+VF+ M
Sbjct: 408 TLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRM 467
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+K VV+WNSMI G ++G E A+ ++ +M G PN+ TF+ +L+ACTHAG+V +G
Sbjct: 468 EQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGI 527
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+F+ M++ + P+VEH C+VDLL ++G + ++ + + + +E +W LLSAC
Sbjct: 528 AFFEEMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRA 587
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H++ EL K+ A L+ LEP + YVLLSNIYA G W +V +R +M+ K L+K S
Sbjct: 588 HADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYS 647
Query: 593 LVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD 633
+ +V++ R +Y+++ +G Q++ D
Sbjct: 648 WIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLERTSPD 688
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/481 (36%), Positives = 269/481 (55%), Gaps = 9/481 (1%)
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+C T M + + ND + + +M V N YT+ L C +R+L +GK H
Sbjct: 220 VCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGC 279
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
++K G EL + SL+ MY CG++ +AR+VF + DLV W +MI GY N V A
Sbjct: 280 LIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 339
Query: 243 RELFDFMPERDI----FTWNSMISGYVDVGDME---AANGLFDLMPFRDVVSWNCMIDGY 295
LF M I T S++SG VG++E + +GL + D N ++ Y
Sbjct: 340 LSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVANALVHMY 399
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
AK A+ F+ +++V+WN +++ + + E L LF RM PN ++
Sbjct: 400 AKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVA 459
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRI--KPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
S+ +ACA++G + IG +H+Y K V + T+LL YAKCG + AR +FD +
Sbjct: 460 SLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIE 519
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
EKN ++W++MI GYG G + +LE+F EM K+ PN++TF VLSAC+H GMV EG
Sbjct: 520 EKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKK 579
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
YF M + Y P +HY CMVD+L RAG + + +++ K+P++ +GA L C H
Sbjct: 580 YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMH 639
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
S +LG+IV + +++L P D YVL+SN+YAS+G+W + + +R +MK++ L K G S+
Sbjct: 640 SRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSI 699
Query: 594 V 594
+
Sbjct: 700 M 700
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 226/490 (46%), Gaps = 14/490 (2%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P L C+ + Q H L +GL D A++ L L S + L FD I
Sbjct: 56 SRPCFLLLSKCTNIDSLRQAHGVLTGNGLMGDISIATK-LVSLYGSFGYTKDARLVFDQI 114
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
EPD ++ I++ + + N+ F + F Y+ +M ++ F K C ++ L G
Sbjct: 115 PEPDFYLWKVILRCYCLNNESFEVIKF-YDLLMKHGFGYDDIVFSKALKACTEVQDLDNG 173
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
KK+H +IVK D V L+ MY+ CGE+ + KVFED + ++V W SMI GYVKN
Sbjct: 174 KKIHCQIVKVP-SFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKN 232
Query: 237 REVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
LF+ M E + +T+ +++ + + + + +C++
Sbjct: 233 DLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLV 292
Query: 293 ----DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
D Y K G++++AR F+ ++V W ++ Y E L LF +M K
Sbjct: 293 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIK 352
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN ++ SVL+ C +G +++G+ IH K I D ++ +L+ MYAKC A+ V
Sbjct: 353 PNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYV 411
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ +EK++V+WNS+I G+ +G +AL +F M PN T + SAC G +
Sbjct: 412 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSL 471
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYG-CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
G ++ + H G ++D + G +S L+ E W A++
Sbjct: 472 AIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG-DAESARLIFDTIEEKNTITWSAMI 530
Query: 528 SACSTHSNSE 537
+++
Sbjct: 531 GGYGKQGDTK 540
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 264/509 (51%), Gaps = 40/509 (7%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+ L C R+L G++VHA F +F+ N L+ MY+ CG ++DA+ +F++
Sbjct: 90 YSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMG 149
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
DL +WN+MI GY K + AR+LFD MP+RD F+WN+ ISGYV A LF +
Sbjct: 150 HRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRV 209
Query: 280 MPFR----------------------------------------DVVSWNCMIDGYAKIG 299
M D V W+ ++D Y K G
Sbjct: 210 MQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCG 269
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
++ AR FD+M R+VVSW ++ E LF +++ +PNE + VL
Sbjct: 270 SLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLN 329
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA+ +G+ +H Y+ P ++L+ MY+KCG +AR VF+ M + ++VS
Sbjct: 330 ACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVS 389
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W S+I+GY +GQ ++AL F + + G P+ T++ VLSACTHAG+V +G YF ++
Sbjct: 390 WTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIK 449
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ + +HY C++DLL R+G +++E ++ +P++ LW +LL C H N EL
Sbjct: 450 EKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELA 509
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
K A+ L E+EP +P Y+ L+NIYA+ G W EV N+R+ M + K G S +
Sbjct: 510 KRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQ 569
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+V + + ++ LGE+ ++K
Sbjct: 570 VHVFLVGDTSHPKTSDIHEFLGELSKKIK 598
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 192/432 (44%), Gaps = 26/432 (6%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
+P V +S+ +L C ++ + Q+L + + + L + +
Sbjct: 119 VPGVFISNRLLDMYAKCGSL-----VDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQAR 173
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD + + D F N + ++ N P AL + + N +T A I
Sbjct: 174 KLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAI 233
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
LR GK++H +++ LD V ++L+ +Y CG + +AR +F+ D+V+W +MI
Sbjct: 234 PCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMI 293
Query: 231 DGYVKN--REVGFA--RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------ 280
++ RE GF R+L + +T+ +++ D + M
Sbjct: 294 HRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYD 353
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P +S ++ Y+K GN AR F+ M ++VSW L+ Y + E L F+
Sbjct: 354 PGSFAIS--ALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFE 411
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+++ KP++ + + VL+AC + G++D G ++ HS +K + ++ + A+
Sbjct: 412 LLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARS 471
Query: 400 GVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGE---KALEMFMEMEKRGPTPNDATF 455
G A N+ DNM K + W S++ G +HG E +A + E+E P AT+
Sbjct: 472 GRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENP----ATY 527
Query: 456 ICVLSACTHAGM 467
I + + +AG+
Sbjct: 528 ITLANIYANAGL 539
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
R D +P+ +++ AC +++G+ +H++ + P V +S LL MYAKCG +
Sbjct: 80 RTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLV 139
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A+ +FD M +++ SWN+MI+GY G+ E+A ++F EM P ++ ++ +S
Sbjct: 140 DAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM----PQRDNFSWNAAISGYV 195
Query: 464 HAGMVLEGWWYFDLMQR 480
E F +MQR
Sbjct: 196 THNQPREALELFRVMQR 212
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 327/609 (53%), Gaps = 50/609 (8%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQEPDA 121
L+SC ++ QIH ++ GL QD+ + CT S S+ + +Q P
Sbjct: 23 LQSCESMAHLTQIHAKIFRVGL-QDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQSPCL 81
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
M N ++K+ + ++ F + + ++ + + +++T P + K + + EG+KVH
Sbjct: 82 VMYNLMIKA-VAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGEKVHG 140
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+VK GF D V NS++ MY G++ A+KVF++ P D+V+WN +I YV +R+
Sbjct: 141 YVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFED 198
Query: 242 ARELFDFM-------------------------------------PERDIFT--WNSMIS 262
A +F M E ++ T N+++
Sbjct: 199 AIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAELEMTTKIGNALLD 258
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
Y G ++ A +FD M ++V+ W M+ GYA G++ AR F+R +R++V W +
Sbjct: 259 MYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAM 318
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+ YV+ + E L+LF +M +P+ L+++L CA G ++ G+W+H YI + I
Sbjct: 319 INGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSI 378
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
D ++ T+L+ +YAKCG ++ A VF M E++ SW S+I G ++G KAL+ F +
Sbjct: 379 TLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQ 438
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
ME+ G P+D TFI VL+AC H G+V EG YFD M + YKI+PK EHY C++DLL RAG
Sbjct: 439 MEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAG 498
Query: 503 LMRDSEELVSKLPMEAGP---ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
L+ ++E L+ +P+E+ L+ +LLSAC + N ++ + V + L +E +D + L
Sbjct: 499 LLDEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTL 558
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC-IVYS 618
L+++YAS +W++V +RR MKE + K G S + E +V P H + ++S
Sbjct: 559 LASVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGG-PSHMEMDDIHS 617
Query: 619 MLGEIGAQM 627
+LG++ M
Sbjct: 618 VLGQVTKWM 626
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 172/404 (42%), Gaps = 50/404 (12%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVL 96
+E + + + DN LP P+ + + V E ++H ++ SG D+ + V+
Sbjct: 105 SELRKQGLNPDNFTLP------PVFKAMGCLGKVVEGEKVHGYVVKSGF--DACVCNSVM 156
Query: 97 KKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHN 156
+ +L + ++ FD I E D N ++ S++ A++ + ++ +
Sbjct: 157 G-MYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKAD 215
Query: 157 HYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
T C+ +R+ G+++H R V E+ + N+L+ MY CG V AR +F+
Sbjct: 216 EATVVSTLSACSVLRNQEVGEEIH-RYVDAELEMTTKIGNALLDMYCKCGCVDKARAIFD 274
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL 276
+ +++ W SM+ GY N + ARELF+ P RDI W +MI+GYV + A L
Sbjct: 275 EMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKL 334
Query: 277 FDLMPFR---------------------------------------DVVSWNCMIDGYAK 297
F M + D V ++D YAK
Sbjct: 335 FRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAK 394
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
G V A F M R+ SW ++ + L F +M +P++ + + V
Sbjct: 395 CGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGV 454
Query: 358 LTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
LTAC + G+++ G ++ S + +I+P + L+ + + G
Sbjct: 455 LTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAG 498
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/452 (39%), Positives = 266/452 (58%), Gaps = 30/452 (6%)
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF----EDGPVW-DLVTWNSMIDGYVKN 236
+I + + F N+LI S + DA VF ED V + T+ S+ +
Sbjct: 43 KIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRA 102
Query: 237 REVGFAREL----FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF---------- 282
+ R++ F + D F ++++ Y+ G ME A+ LF F
Sbjct: 103 ERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDK 162
Query: 283 -----RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
DVV WN MIDGY +IG + ARN FD M R+VVSWN+++A Y + + E +
Sbjct: 163 KRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVE 222
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
+F M + PN +L+SVL A + +G +++G+W+H Y + I D +L ++L+ MYA
Sbjct: 223 VFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYA 282
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
KCG ++ A VF+ + ++NVV+W+++I G MHG+ + L+ F +ME+ G P+D T+I
Sbjct: 283 KCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIG 342
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+LSAC+HAG+V EG W+FD M R+ +EP++EHYGCMVDLLGRAGL+ +SEEL+ +P++
Sbjct: 343 LLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIK 402
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
+W ALL AC H N E+GK VA+HLMEL P D G YV LSNIYAS G W+ V +R
Sbjct: 403 PDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVR 462
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCP 609
+MKE ++ S+ HP E A ++E P
Sbjct: 463 LMMKEMDV-----SARWHP-EDACXDMLEEAP 488
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 218/454 (48%), Gaps = 71/454 (15%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLK-KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
+++ Q+H Q++ + +D AA+ +L+ + + + F + P+ F NT++
Sbjct: 1 MQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLI 60
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
++ NDP AL + E + VE N +TFP + K C LREG++VH VK G
Sbjct: 61 RALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGL 120
Query: 189 ELDLFVRNSLIHMYSVCGEVLDA-----RKVFEDG----------PVWDLVTWNSMIDGY 233
+ D FV ++++ MY CG + DA R+VF DG D+V WN MIDGY
Sbjct: 121 DSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGY 180
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV-------- 285
V+ E+ AR LFD MP+R + +WN MI+GY G + A +F M +V
Sbjct: 181 VRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLV 240
Query: 286 -------------------------------VSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
V + +ID YAK G++ A F+ + R
Sbjct: 241 SVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR 300
Query: 315 NVVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
NVV+W+ + LA++ R KD L F+ M R P++ + + +L+AC++ G+++ G+
Sbjct: 301 NVVTWSTIIAGLAMHGRAKD---TLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGR 357
Query: 372 WIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGM 429
W ++ + ++P + ++ + + G+++ + + NM K + V W +++ M
Sbjct: 358 WFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKM 417
Query: 430 HGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
HG G++ E ME+ P+D+ LS
Sbjct: 418 HGNVEMGKRVAEHLMEL-----APHDSGSYVALS 446
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 262/495 (52%), Gaps = 60/495 (12%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
SL + K++HA+++K + FV LI +S+C ++ A VF D++ +N++I
Sbjct: 29 SLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIR 88
Query: 232 GYVKNREVGFARELFDFMPER--------------------------------------- 252
+V+N E A +F M +
Sbjct: 89 AHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCL 148
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
DIF NS+I Y +G++ A LFD MP RD VSWN ++DGY K G + +A F++M
Sbjct: 149 DIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMP 208
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RNVVSW+ + A K ++ +++S+L+ACA G++ +G+
Sbjct: 209 ARNVVSWSTMEA---------------------GLKFDDGTVISILSACAVSGLLGLGKR 247
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+H+ I++ R K +S +L+ MYAKCG ++ A ++F M K+VVSWN++I G MHG
Sbjct: 248 VHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGH 307
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
GEKAL++F M+ G P+ TF+ VL ACTHAG V EG YF M+R Y + P+VEHYG
Sbjct: 308 GEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYG 367
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVDLLGR G ++++ LV +P+E +WG LL AC HS + L + V L++ E
Sbjct: 368 CMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELS 427
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
D G +LSNIYA+ G WD N+R MK ++K G S + + E V + +
Sbjct: 428 DSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPK 487
Query: 613 KCIVYSMLGEIGAQM 627
+Y + +G +
Sbjct: 488 SDRIYKTIDGLGQHI 502
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 217/407 (53%), Gaps = 26/407 (6%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQE 118
+ L CS++ + QIH Q+L + L ++SF +++ LC ++ L+V F+ IQ+
Sbjct: 21 ISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMT---LAVNVFNQIQD 77
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
PD + NT++++ + ++P A S ++E M V +++T+P L K C+G +R +
Sbjct: 78 PDVLLYNTLIRAHVRNSEPLLAFSVFFE-MQDSGVCADNFTYPFLLKACSGKVWVRVVEM 136
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HA++ K GF LD+FV NSLI Y GE+ +AR++F++ P D V+WN+++DGYVK E
Sbjct: 137 IHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGE 196
Query: 239 VGFARELFDFMPERDIFTWNSMISGY-------VDVGDMEAANGLFDL----------MP 281
+ A ELF+ MP R++ +W++M +G + + A +GL L
Sbjct: 197 MNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTR 256
Query: 282 FR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
F+ N +ID YAK G++ +A + F M ++VVSWN ++ + L+LF
Sbjct: 257 FKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFS 316
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
RM P++ + + VL AC + G +D G + H+ + + P+V ++ + +
Sbjct: 317 RMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRG 376
Query: 400 GVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
G + A + +M E N + W +++ MH A E+F + K
Sbjct: 377 GRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVK 423
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 253/462 (54%), Gaps = 42/462 (9%)
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIH--MYSVCGEVLD-ARKVFEDGPVWDLVTWNSMID 231
E K++HAR++K G D + + + S + L A+ VF+ D WN MI
Sbjct: 58 ELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 117
Query: 232 GYVKNREVGFARELFDFM---------------------------------------PER 252
G+ + E + L+ M E
Sbjct: 118 GFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D++ NS+I+ Y G+ + A+ LFD +P D VSWN +I GYAK G + A F +M
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMV 237
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
+N +SW +++ YV+ + E L+LF M D +P+ SL + L+ACA +G ++ G+W
Sbjct: 238 EKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 297
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IHSY+ K RI+ D +L L+ MYAKCG M A VF N+ K+V +W ++I GY HG
Sbjct: 298 IHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGH 357
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G +A+ FMEM+K G PN TF VL+AC++ G+V EG F M+R Y ++P +EHYG
Sbjct: 358 GREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYG 417
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VDLL RAGL+ +++ + ++P++ +WGALL AC H N ELG+ + + L+ ++P
Sbjct: 418 CVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPY 477
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G YV +NI+A KWD+ RR+MKE+ + K G S +
Sbjct: 478 HGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTI 519
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 208/424 (49%), Gaps = 47/424 (11%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFFDGIQEPDAFMC 124
CS +E QIH ++L +GL QDS+A ++ L +S SS + + + FDG PD F+
Sbjct: 53 CSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLW 112
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N +++ F ++P +L Y++M+ HN YTFP L K C+ + +L E ++HA+I
Sbjct: 113 NLMIRGFSCSDEPERSL-LLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQIT 171
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K G+E D++ NSLI+ Y+ G A +F+ P D V+WNS+I GY K ++ A
Sbjct: 172 KLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALT 231
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN--------------- 289
LF M E++ +W +MISGYV G + A LF M DV N
Sbjct: 232 LFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 291
Query: 290 ------------------------CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+ID YAK G++ A F + ++V +W L++
Sbjct: 292 LEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISG 351
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKP 384
Y E + F M + KPN + +VLTAC+ G+++ G+ I +++ +KP
Sbjct: 352 YAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKP 411
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMF 440
+ ++ + ++ G++D A+ M K N V W +++ +H GE+ E+
Sbjct: 412 TIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 471
Query: 441 MEME 444
+ ++
Sbjct: 472 IAID 475
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 133/308 (43%), Gaps = 49/308 (15%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ + S ++E QIH Q+ G D +A + ++ + + L+ L FD I +P
Sbjct: 150 LLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAAT-GNFKLAHLLFDRIPKP 208
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFY------------------------------YEKMM 149
DA N+++K + AL+ + + +M
Sbjct: 209 DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ 268
Query: 150 AKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL 209
VE ++ + CA + +L +GK +H+ + K +D + LI MY+ CG++
Sbjct: 269 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMG 328
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE-LFDFMPER------DIFTWNSMIS 262
+A +VF++ + W ++I GY + G RE + FM + ++ T+ ++++
Sbjct: 329 EALEVFKNIQRKSVQAWTALISGYAYH---GHGREAISKFMEMQKMGIKPNVITFTTVLT 385
Query: 263 GYVDVGDMEAANGLFDLMPFRD------VVSWNCMIDGYAKIGNVTSARNCFDRMCMR-N 315
G +E +F M RD + + C++D ++ G + A+ M ++ N
Sbjct: 386 ACSYTGLVEEGKLIFYNME-RDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPN 444
Query: 316 VVSWNILL 323
V W LL
Sbjct: 445 AVIWGALL 452
>gi|297828245|ref|XP_002882005.1| hypothetical protein ARALYDRAFT_903974 [Arabidopsis lyrata subsp.
lyrata]
gi|297327844|gb|EFH58264.1| hypothetical protein ARALYDRAFT_903974 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
A +LF MPE+D+ +WNSMI GYV G +E A GLFD+MP RDVV+ MIDGYAK+G
Sbjct: 34 IASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGF 93
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLT 359
V A+ FD+M +R+VV++N ++A YV+ K + E L +F+ M + P+E +L+ +L+
Sbjct: 94 VHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILS 153
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A A +G + +H YI + + L +L+ MY+KCG + A VF+ + K++
Sbjct: 154 AIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 213
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI G +HG GE A M +++E+ P+D TF+ VL+AC+H+G+V EG F+LM+
Sbjct: 214 WNAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMR 273
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
R +KIEP+++HYGCMVD+L R+G + ++ L+ ++P+E +W L+ACS H E G
Sbjct: 274 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETG 333
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++VA+HL+ +P YVLLSN+YAS G W +V +R +MKE+++EK G S +
Sbjct: 334 ELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 388
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E DL NS+I Y G + DA+ +F+ P D+VT +MIDGY K V A+ LFD
Sbjct: 44 EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQ 103
Query: 249 MPERDIFTWNSMISGYVD----------VGDME-----------------AANGLFDLMP 281
MP RD+ +NSM++GYV DME A L L
Sbjct: 104 MPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSK 163
Query: 282 FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
D+ + +ID Y+K G++ A F+ + +++ WN ++
Sbjct: 164 ATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAV 223
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVL 387
+ ++ R P++ + + VL AC++ G++ G + +K +I+P +
Sbjct: 224 HGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 283
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGE 434
++ + ++ G ++LA+N+ + M E N V W + + H + E
Sbjct: 284 HYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFE 331
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 126/330 (38%), Gaps = 56/330 (16%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L V + FD + D N++M ++ AL + + + + T +
Sbjct: 91 LGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVI 150
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ A + L + +H IV+ F L + +LI MYS CG + A VFE
Sbjct: 151 ILSAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 210
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM--PER-----DIFTWNSMISGYVDVGDMEAANG 275
+ WN+MI G + G F+ + ER D T+ +++ G ++
Sbjct: 211 IDHWNAMIGGLAVH---GLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLL 267
Query: 276 LFDLMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
F+LM + + + CM+D ++ G++ A+N + M +
Sbjct: 268 CFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPI----------------- 310
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPD--VL 387
+PN+ + LTAC++ + G+ + + I + P VL
Sbjct: 311 -----------------EPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVL 353
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
LS MYA G+ R V M E+ +
Sbjct: 354 LS----NMYASFGMWKDVRRVRTMMKERKI 379
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 385 DVLLSTSLLTMYAKCGV-MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
DV LS + TM KC +A +F M EK+++SWNSMI GY HG+ E A +F M
Sbjct: 14 DVSLSHASGTMLLKCRCNCSIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVM 73
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+R + T ++ G V + FD M
Sbjct: 74 PRR----DVVTCATMIDGYAKLGFVHQAKTLFDQM 104
>gi|255566945|ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536243|gb|EEF37895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/467 (36%), Positives = 262/467 (56%), Gaps = 48/467 (10%)
Query: 49 QRLPIVD------LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS 102
Q LP D +HP L L +C +K QIH+Q++ +GL FA S++++ S
Sbjct: 10 QILPFSDPPYKFLQTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVIS 69
Query: 103 -LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
+S ++L F I +P+ + N I++ + P A+ +Y + + + F N YT+P
Sbjct: 70 PYGDLSYALLLFKSIGKPNQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTP-NTYTYP 128
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
+ K CA I S EGK++H +I+K GF+ D FV SLI MY GE+ +AR VFE +
Sbjct: 129 FVLKSCARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMR 188
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
D+V++ ++I GY + A ELFD +P RD+ +WN+MI+GY G E A F+ M
Sbjct: 189 DVVSYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEML 248
Query: 282 FRDVV--------------------------SW-------------NCMIDGYAKIGNVT 302
+V SW N +ID YAK G++
Sbjct: 249 RANVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMYAKCGDLE 308
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+A + F+ + +NV+SWN+++ Y Y E L LF +M++ + +PN+ +L+S+L ACA
Sbjct: 309 NALHLFEGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPACA 368
Query: 363 NMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
N+G + +G+WIH+YI K + + L TSL+ MYAKCG +++A +FD M K++ SWN
Sbjct: 369 NLGALGLGKWIHAYIDKNMKNLANNALWTSLIDMYAKCGNIEVANQIFDGMNPKSLASWN 428
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
+MI G+ MHGQ + A+ +F M K G P++ TFI VLSAC HAG++
Sbjct: 429 AMISGFAMHGQADLAISLFSRMTKEGLVPDNITFIGVLSACNHAGLL 475
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 214/431 (49%), Gaps = 49/431 (11%)
Query: 151 KFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH--MYSVCGEV 208
KF++ H + LL C +++L K++H++++K G F + LI + S G++
Sbjct: 20 KFLQ-THPSLTLL-STCKNLKTL---KQIHSQVIKTGLHNTHFALSKLIEFCVISPYGDL 74
Query: 209 LDARKVFEDGPVWDLVTWNSMIDG-------------YVKNREVGFARELFDFMP----- 250
A +F+ + + WN++I G YV GF + + P
Sbjct: 75 SYALLLFKSIGKPNQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTY-PFVLKS 133
Query: 251 ----------------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
+ D F S+I+ YV G++ A +F+ RDVVS+
Sbjct: 134 CARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMRDVVSY 193
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+I GYA G + A FD + +R+VVSWN ++A Y + + E L F+ M+R +
Sbjct: 194 TALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEMLRANVT 253
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN ++L+SVL+ACA G + +G W+ S+I++ ++ ++ + +L+ MYAKCG ++ A ++
Sbjct: 254 PNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMYAKCGDLENALHL 313
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ + KNV+SWN MI GY ++AL +F +M + PND T + +L AC + G +
Sbjct: 314 FEGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPACANLGAL 373
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
G W + + K + ++D+ + G + + ++ + ++ A W A++S
Sbjct: 374 GLGKWIHAYIDKNMKNLANNALWTSLIDMYAKCGNIEVANQIFDGMNPKS-LASWNAMIS 432
Query: 529 ACSTHSNSELG 539
+ H ++L
Sbjct: 433 GFAMHGQADLA 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 157/356 (44%), Gaps = 43/356 (12%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLK-----------KLCTSLSS---- 105
L+SC+ + H QIH Q+L G D+F + ++ +L SS
Sbjct: 131 LKSCARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMRDV 190
Query: 106 VSLSVL---------------FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMA 150
VS + L FD I D N ++ + + F ++E+M+
Sbjct: 191 VSYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQ-SGRFEEALIFFEEMLR 249
Query: 151 KFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD 210
V N T + CA SL+ G V + I + G E ++ V N+LI MY+ CG++ +
Sbjct: 250 ANVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMYAKCGDLEN 309
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVK----NREVGFARELFDFMPERDIFTWNSMISGYVD 266
A +FE ++++WN MI GY +G R++ E + T S++ +
Sbjct: 310 ALHLFEGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPACAN 369
Query: 267 VGDMEAANGLF-----DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+G + + ++ + W +ID YAK GN+ A FD M +++ SWN
Sbjct: 370 LGALGLGKWIHAYIDKNMKNLANNALWTSLIDMYAKCGNIEVANQIFDGMNPKSLASWNA 429
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
+++ + + LF RM + P+ + + VL+AC + G++D+G H +I
Sbjct: 430 MISGFAMHGQADLAISLFSRMTKEGLVPDNITFIGVLSACNHAGLLDLGHINHFHI 485
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/582 (30%), Positives = 302/582 (51%), Gaps = 53/582 (9%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+ + L+ +K ++HT + Q+ ++++ + L+ FD + +
Sbjct: 24 LAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSY-AACGEPGLTRKVFDEMSDR 82
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N +++S++ N + + +M+ ++YT+P + K C+ +LR G +
Sbjct: 83 NVVFYNVMIRSYVN-NHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLI 141
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H ++K G + +LFV N LI MY CG + +AR+VF D +W
Sbjct: 142 HGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVF-DEMIW------------------ 182
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD--LMPFRDVVSWNCMIDGYAK 297
+D+ +WNSM++GY A N FD L R++ + DG
Sbjct: 183 ------------KDVVSWNSMVAGY-------AHNMRFDDALEICREMEDYGQKPDGCTM 223
Query: 298 IG-----------NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
NV F + +N++SWN+++ +Y++ + + L+ +M +
Sbjct: 224 ASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCR 283
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
+P+ + SVL AC ++ + +G+ IH Y++K ++ P++LL SL+ MYA+CG +D A+
Sbjct: 284 VEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAK 343
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
VFD M ++V SW S+I YGM GQG A+ +F EM G P+ F+ +LSAC+H+G
Sbjct: 344 RVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSG 403
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
++ EG YF M Y+I P++EHY C+VDLLGRAG + ++ ++ ++P+E +W L
Sbjct: 404 LLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATL 463
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
LS+C +N ++G + A +L++L P G YVLLSNIYA G+W EV +R +MK K++
Sbjct: 464 LSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIR 523
Query: 587 KAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
K G S V + + + +Y LG + A+MK
Sbjct: 524 KTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMK 565
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 249/435 (57%), Gaps = 1/435 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N L+ M G V AR++F P D++ W +M+DG ++ V AR LFD MPER++
Sbjct: 169 NILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVV 228
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MISGY ++ A LF MP RD+ S N MI G+ + ++ AR FD M RN
Sbjct: 229 SWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERN 288
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+W ++ Y++ K L LF M+ +PN+ + + L AC+++ + G+ +H
Sbjct: 289 VVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQ 348
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
I K + D + ++L+ +YAKCG + LAR +FD EK+++SWN +I Y HG G +
Sbjct: 349 MICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIE 408
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ ++ +M+ G PND T++ +LSAC+H+G+V EG F+ M I + EHY C++
Sbjct: 409 AIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLI 468
Query: 496 DLLGRAGLMRDSEELVSKLPME-AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
DL RAG + D++ L+ L ++ A ++W ALL C+ H N +G + A++L++ EP +
Sbjct: 469 DLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNA 528
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
G Y LLSNIYAS GKW E +R M + L+K G S + + +
Sbjct: 529 GTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESD 588
Query: 615 IVYSMLGEIGAQMKM 629
++Y +L I M++
Sbjct: 589 LIYGLLQNIHYMMRI 603
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 188/400 (47%), Gaps = 44/400 (11%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM-PERDI 254
N LI + G V DARK+F+ P D+V+W +++ Y + + AR LFD R++
Sbjct: 44 NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNV 103
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
TW +++SGY G ++ A LF MP R+VVSWN M++ YA G A FDRM +R
Sbjct: 104 VTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVR 163
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDR-----------MIRGDAKP---NEASLMSVLTA 360
+ SWNILLA+ VR + LF R M+ G A+ +EA L+ +
Sbjct: 164 DAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLL--FDS 221
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM-YAKCGVM--------DL--ARNVF 409
V+ I Y + R+ + L T + A C +M DL AR +F
Sbjct: 222 MPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLF 281
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D M E+NVV+W +M+ GY Q E +L +F M G PN TF+ L AC+ +
Sbjct: 282 DEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLC 341
Query: 470 EGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
EG + Q I K +V+ + ++++ + G + + +L L E W ++
Sbjct: 342 EG---KQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFD-LSREKDLISWNGII 397
Query: 528 SACSTHSNSELGKIVAQHLME------LEPRDPGPYVLLS 561
+A + H I A HL E P D VLLS
Sbjct: 398 AAYAHHGVG----IEAIHLYEKMQGNGYRPNDVTYVVLLS 433
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E + T+M +L +L + +M+ + N TF C+ +
Sbjct: 280 LFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSG-IRPNQVTFLGALDACSDLA 338
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L EGK+VH I K F++D FV ++L+++Y+ CGEV ARK+F+ DL++WN +I
Sbjct: 339 TLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIA 398
Query: 232 GYVKN 236
Y +
Sbjct: 399 AYAHH 403
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 302/546 (55%), Gaps = 13/546 (2%)
Query: 60 ILQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
I L +CS V + Q+H+ LL +G+S D +L S + ++ FD
Sbjct: 247 IASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKS-GDIEEALQIFDSG 305
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+ + N ++ ++ ++D + +Y +M+A V N +T+P + + C + G
Sbjct: 306 DRTNVVLWNLMLVAYGQIDDLAKSFDIFY-RMLAAGVRPNKFTYPCMLRTCTHTGEIGLG 364
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+++H+ +K GF+ D++V LI MYS G + A+++ + D+V+W SMI GYV++
Sbjct: 365 EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQH 424
Query: 237 REVGFARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFDLMPFR----DVVSW 288
A E F M I+ N S IS + + + + + DV W
Sbjct: 425 EFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIW 484
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++ YA+ G A + F+ + + ++WN L++ + + Y E L++F +M + AK
Sbjct: 485 NGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAK 544
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
N + +S ++A AN+ I G+ IH+ + K + +S +L+++Y KCG ++ A+
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMD 604
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F MT++N VSWN++I HG+G +AL++F +M+++G P+D TF+ VL+AC+H G+V
Sbjct: 605 FFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLV 664
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M + I P+ +HY C+VD+LGRAG + ++ V ++P+ A +W LLS
Sbjct: 665 EEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLS 724
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N E+G+ A+HL+ELEP D YVLLSN YA GKW + +R+IMK++ + K
Sbjct: 725 ACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKE 784
Query: 589 VGSSLV 594
G S +
Sbjct: 785 PGRSWI 790
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 195/427 (45%), Gaps = 30/427 (7%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV---CAGIRSLR-EGKK-- 178
N + FL +DP EK++ F + +LG V CA +R+ R G++
Sbjct: 10 NRPLAGFLAPDDP--------EKLLPLFAAKCR-QYMVLGAVDFACA-LRACRGSGRRWP 59
Query: 179 ----VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
+HA+ + CG + N LI +Y+ G V AR+VFE+ V D V+W +++ GY
Sbjct: 60 LVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYA 119
Query: 235 KNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAAN----GLFDLMPFRDVV 286
+N A L+ M + + +S++S + ++ F +
Sbjct: 120 QNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N +I Y + + A F M + V++N L++ + +C L +FD M
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
P+ ++ S+L AC+ +G + G+ +HSY+ K + D ++ SLL +Y K G ++ A
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+FD+ NVV WN M++ YG K+ ++F M G PN T+ C+L CTH G
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ G L + + + G ++D+ + G + ++ ++ + E W ++
Sbjct: 360 EIGLGEQIHSLTIK-NGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE-EKDVVSWTSM 417
Query: 527 LSACSTH 533
++ H
Sbjct: 418 IAGYVQH 424
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 311/594 (52%), Gaps = 64/594 (10%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE-- 118
L++C + F +H + SG + F + L + + + FD ++E
Sbjct: 152 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG-LVSMYGRCGAWENARQVFDEMRERG 210
Query: 119 -PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF-VEHNHYTFPLLGKVCAGIRSLREG 176
D N+I+ +++ D A+ + E+M + + + + CA + + G
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMF-ERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 269
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
K+VH ++ G D+FV N+++ MY+ CG + +A KVFE V D+V+WN+M+ GY +
Sbjct: 270 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQI 329
Query: 237 REVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLM------------ 280
A LF+ + E ++ TW+++I+GY G A +F M
Sbjct: 330 GRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTL 389
Query: 281 ----------------------------------PFRDVVSWNCMIDGYAKIGNVTSARN 306
P D++ N +ID Y+K + +AR
Sbjct: 390 VSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARA 449
Query: 307 CFDRMCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACA 362
FD + R+VV+W +L+ + + E L LF +M++ D PN ++ L ACA
Sbjct: 450 MFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACA 509
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVL-LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+G + G+ IH+Y+ + R + +L ++ L+ MY+K G +D AR VFDNM ++N VSW
Sbjct: 510 RLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWT 569
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
S++ GYGMHG+GE+AL++F EM+K P+ TF+ VL AC+H+GMV +G YF+ M +
Sbjct: 570 SLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKD 629
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+ + P EHY CMVDLL RAG + ++ EL+ +PM+ PA+W ALLSAC ++N ELG+
Sbjct: 630 FGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEY 689
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
A L+ELE + G Y LLSNIYA+ W +V +R +MK ++K G S V
Sbjct: 690 AANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 743
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 252/548 (45%), Gaps = 77/548 (14%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV-SLSVLF 112
DL+ + + +S ++ + HQ QLLV GL D + ++ T S +LSVL
Sbjct: 48 TDLTSTLFHQCKSLASAELTHQ---QLLVQGLPHDP---THIISMYLTFNSPAKALSVLR 101
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F N +++ + L L Y +M +HYTFP + K C I S
Sbjct: 102 RLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLY-RRMQRLGWRPDHYTFPFVLKACGEIPS 160
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE---DGPVWDLVTWNSM 229
R G VHA + GFE ++FV N L+ MY CG +AR+VF+ + V DLV+WNS+
Sbjct: 161 FRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSI 220
Query: 230 IDGYVKNREVGFARELFDFMPE-------------------------------------- 251
+ Y++ + A ++F+ M E
Sbjct: 221 VAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSG 280
Query: 252 --RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
D+F N+++ Y G ME AN +F+ M +DVVSWN M+ GY++IG A F+
Sbjct: 281 LFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFE 340
Query: 310 RM----CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
++ NVV+W+ ++A Y + E L +F +M+ ++PN +L+S+L+ CA+ G
Sbjct: 341 KIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAG 400
Query: 366 VIDIGQWIHSYIQKCRIK-------PDVLLSTSLLTMYAKCGVMDLARNVFDNM--TEKN 416
+ G+ H + K + D+++ +L+ MY+KC AR +FD + +++
Sbjct: 401 TLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRS 460
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP--TPNDATFICVLSACTHAGMVLEGWWY 474
VV+W +I G HG+ +ALE+F +M + PN T C L AC G +
Sbjct: 461 VVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-----R 515
Query: 475 FDLMQRIYKIEPKVEH-----YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
F Y + + E C++D+ ++G + + + + G + W +L++
Sbjct: 516 FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTG 574
Query: 530 CSTHSNSE 537
H E
Sbjct: 575 YGMHGRGE 582
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 269/472 (56%), Gaps = 11/472 (2%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA ++L + +K+HA + F D F+ NSLIH+Y CG V++A KVF+ D+V+
Sbjct: 60 ACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVS 119
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSM---ISGYVDVGDMEAANGLFD 278
W S+I GY +N +G + + + FT+ S+ + Y D G + L
Sbjct: 120 WTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAV 179
Query: 279 LMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
+ DV + ++D YA+ G + A FD++ +N VSWN L++ + R D L
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
+F M R + + S+ +A A +G ++ G+W+H+++ K R K + ++L MYA
Sbjct: 240 VFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYA 299
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
K G M AR VF+ + K++V+WNSM+ + +G G++A+ F EM K G N +F+C
Sbjct: 300 KSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLC 359
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+L+AC+H G+V EG YFD+++ Y +EP++EHY +VDLLGRAGL+ + + K+PME
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPME 418
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A+WGALL+AC H N+++G+ A H+ +L+P D GP VLL NIYAS G WD +R
Sbjct: 419 PTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVR 478
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPH-RKCIVYSMLGEIGAQMK 628
++MK ++K S V E + V N H R +Y M EI +++
Sbjct: 479 KMMKATGVKKEPACSWVEI-ENSVHMFVANDDTHPRAEEIYKMWDEISMKIR 529
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 183/388 (47%), Gaps = 11/388 (2%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P + H + + + +IH L S + D+F + ++ C S V +
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F D ++ D +++ + + P A+ + +F + N +TF L K
Sbjct: 109 F-DKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRF-KPNGFTFASLLKAVGAYA 166
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
G ++HA VKC + D++V ++L+ MY+ CG++ A VF+ + V+WN++I
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 232 GYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLF-DLMPFRDVV 286
G+ + + A +F M E FT++S+ S +G +E + ++ R +
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKL 286
Query: 287 S---WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+ N M+D YAK G++ AR F+R+ +++V+WN +L + + E + F+ M
Sbjct: 287 TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMR 346
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ N+ S + +LTAC++ G++ G+ I++ ++P++ +++ + + G+++
Sbjct: 347 KSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLN 406
Query: 404 LARN-VFDNMTEKNVVSWNSMIMGYGMH 430
A +F E W +++ MH
Sbjct: 407 YALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L D + G+ P + +TACA +D + IH+++ R D L SL+ +
Sbjct: 36 LHDLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHL 95
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG + A VFD M K++VSW S+I GY + +A+ + M K PN TF
Sbjct: 96 YCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155
Query: 456 ICVLSAC-THAGMVLEGWWYFDLMQRIYKIEPKVEHY------GCMVDLLGRAGLMRDSE 508
+L A +A + G +I+ + K + + ++D+ R G M +
Sbjct: 156 ASLLKAVGAYADSGIGG--------QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMAT 207
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
+ KL + G + W AL+S + + E +V
Sbjct: 208 AVFDKLDSKNGVS-WNALISGFARKGDGETALMV 240
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 263/482 (54%), Gaps = 42/482 (8%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC--GEVLDARKVFEDGPVWDLVTWNSM 229
++ E K++H +++K G + L+ Y+ + AR VF+ + V WN+M
Sbjct: 23 NIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTM 82
Query: 230 IDGYVKNREVGFARELFDFMPER------------------------------------- 252
I Y + + A L+ M
Sbjct: 83 IRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGF 142
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+++ NS++ Y G +++A+ LFDL+P RD+VSWN MIDGY K GNV A F
Sbjct: 143 GSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQA 202
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M +NV+SW ++ +VR + E L L +M+ KP++ +L L+ACA +G ++ G
Sbjct: 203 MPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQG 262
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+WIH+YI K +IK D +L +L+ MY KCG M A VF + +K V +W ++I G+ +H
Sbjct: 263 KWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVH 322
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+G +AL+ F +M+K G P TF VL+AC+H G+V EG F+ M Y ++P +EH
Sbjct: 323 GKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEH 382
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCMVDLLGRAG +++++E V +P++ A+WG+LL+AC H + ELGK + + L+EL+
Sbjct: 383 YGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELD 442
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCP- 609
P G Y+ L++I+A+ G+WDE +R +K K L G S + A E P
Sbjct: 443 PEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPH 502
Query: 610 PH 611
PH
Sbjct: 503 PH 504
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 206/424 (48%), Gaps = 47/424 (11%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDGIQEPDAF 122
LE CS + E QIH QLL G + SR+L + S+++ + + FD I P+
Sbjct: 18 LERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTV 77
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
M NT+++++ NDP AL Y++ M+ + HN YTFP L K C+ + +L E ++H +
Sbjct: 78 MWNTMIRAYSNSNDPEEALLLYHQ-MLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQ 136
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
I+K GF +++ NSL+ +Y++ G + A +F+ P D+V+WN+MIDGY+K V A
Sbjct: 137 IIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMA 196
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNC-------- 290
++F MPE+++ +W SMI G+V G + A L M D ++ +C
Sbjct: 197 YKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGL 256
Query: 291 ---------------------------MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
+ID Y K G + A F ++ + V +W ++
Sbjct: 257 GALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAII 316
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRI 382
+ E L F +M + KP + +VLTAC++ G+++ G+ + + +
Sbjct: 317 GGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNM 376
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFM 441
KP + ++ + + G + A+ ++M K N W S++ +H K LE+
Sbjct: 377 KPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLH----KHLELGK 432
Query: 442 EMEK 445
E+ K
Sbjct: 433 EIGK 436
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 150/365 (41%), Gaps = 47/365 (12%)
Query: 5 LKFTKTTEASLSLDKFIKSQKNLPKTPPKLWANEPKPK-----FTDTDNQRLPIVDLSHP 59
++F+ T A + D+ + T + ++N P+ + + +P + P
Sbjct: 56 MEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFP 115
Query: 60 ILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE 118
L K + S + E HQIH Q++ G + +A + +L+ S S S VL FD +
Sbjct: 116 FLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVL-FDLLPS 174
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFY------------------------------YEKM 148
D NT++ ++ + A + ++M
Sbjct: 175 RDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQM 234
Query: 149 MAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
+ ++ + T CAG+ +L +GK +H I K ++D + +LI MY CGE+
Sbjct: 235 LVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEM 294
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGY 264
A VF + TW ++I G+ + + A + F M + I FT+ ++++
Sbjct: 295 KKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTAC 354
Query: 265 VDVGDMEAANGLFDLMP----FRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVS 318
G +E LF+ M + V+ + CM+D + G + A+ + M ++ N
Sbjct: 355 SHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAI 414
Query: 319 WNILL 323
W LL
Sbjct: 415 WGSLL 419
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL--ARN 407
N MS+L C+N+G + + IH + K L + LLT YA +L AR
Sbjct: 10 NVEQTMSLLERCSNIGEL---KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARM 66
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT---- 463
VFD ++ N V WN+MI Y E+AL ++ +M N TF +L AC+
Sbjct: 67 VFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSA 126
Query: 464 -------HAGMVLEGW----WYFDLMQRIYKIEPKVEHYGCMVDLL 498
H ++ G+ + + + R+Y I ++ + DLL
Sbjct: 127 LAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLL 172
>gi|297828247|ref|XP_002882006.1| hypothetical protein ARALYDRAFT_903976 [Arabidopsis lyrata subsp.
lyrata]
gi|297327845|gb|EFH58265.1| hypothetical protein ARALYDRAFT_903976 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
A +LF MPE+D+ +WNSMI GYV G +E A GLFD+MP RDVV+ MIDGYAK+G
Sbjct: 38 IASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGF 97
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLT 359
V A+ FD+M +R+VV++N ++A YV+ K + E L +F+ M + P+E +L+ +L+
Sbjct: 98 VHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILS 157
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A A +G + +H YI + + L +L+ MY+KCG + A VF+ + K++
Sbjct: 158 AIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 217
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI G +HG GE A M +++E+ P+D TF+ VL+AC+H+G+V EG F+LM+
Sbjct: 218 WNAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMR 277
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
R +KIEP+++HYGCMVD+L R+G + ++ L+ ++P+E +W L+ACS H E G
Sbjct: 278 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETG 337
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++VA+HL+ +P YVLLSN+YAS G W +V +R +MKE+++EK G S +
Sbjct: 338 ELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 392
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E DL NS+I Y G + DA+ +F+ P D+VT +MIDGY K V A+ LFD
Sbjct: 48 EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQ 107
Query: 249 MPERDIFTWNSMISGYVD----------VGDME-----------------AANGLFDLMP 281
MP RD+ +NSM++GYV DME A L L
Sbjct: 108 MPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSK 167
Query: 282 FRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
D+ + +ID Y+K G++ A F+ + +++ WN ++
Sbjct: 168 ATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAV 227
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVL 387
+ ++ R P++ + + VL AC++ G++ G + +K +I+P +
Sbjct: 228 HGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 287
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGE 434
++ + ++ G ++LA+N+ + M E N V W + + H + E
Sbjct: 288 HYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFE 335
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 126/330 (38%), Gaps = 56/330 (16%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L V + FD + D N++M ++ AL + + + + T +
Sbjct: 95 LGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVI 154
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ A + L + +H IV+ F L + +LI MYS CG + A VFE
Sbjct: 155 ILSAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 214
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM--PER-----DIFTWNSMISGYVDVGDMEAANG 275
+ WN+MI G + G F+ + ER D T+ +++ G ++
Sbjct: 215 IDHWNAMIGGLAVH---GLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLL 271
Query: 276 LFDLMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
F+LM + + + CM+D ++ G++ A+N + M +
Sbjct: 272 CFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPI----------------- 314
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPD--VL 387
+PN+ + LTAC++ + G+ + + I + P VL
Sbjct: 315 -----------------EPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVL 357
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
LS MYA G+ R V M E+ +
Sbjct: 358 LS----NMYASFGMWKDVRRVRTMMKERKI 383
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 394 TMYAKCGV-MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
TM KC +A +F M EK+++SWNSMI GY HG+ E A +F M +R +
Sbjct: 27 TMLLKCRCNCSIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DV 82
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLM 478
T ++ G V + FD M
Sbjct: 83 VTCATMIDGYAKLGFVHQAKTLFDQM 108
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/378 (41%), Positives = 234/378 (61%)
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+ D++ ++ Y GD+ +A LFD MP + +VS M+ YAK G + +AR FD
Sbjct: 103 DSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDG 162
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ V WN+++ Y + E L LF RM++ AKPNE +++SVL+AC +G ++ G
Sbjct: 163 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 222
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+W+HSYI+ I+ +V + T+L+ MY+KCG ++ AR VFD + +K+VV+WNSMI+GY M
Sbjct: 223 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMX 282
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G ++AL++F M + G P + TFI +LSAC H+G V EGW F+ M+ Y IEPK+EH
Sbjct: 283 GFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEH 342
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCMV+LLGRAG + + ELV + +E P LWG LL AC H LG+ + + L++
Sbjct: 343 YGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN 402
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
+ G Y+LLSNIYA+ G WD V LR +MK+ ++K G S + E +
Sbjct: 403 LANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNH 462
Query: 611 HRKCIVYSMLGEIGAQMK 628
++ +Y ML EI +K
Sbjct: 463 PKRKEIYMMLEEINGWLK 480
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 189/405 (46%), Gaps = 53/405 (13%)
Query: 96 LKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH 155
L++ SL + SV F Q P F I+ + AL+FY +M+ + VE
Sbjct: 15 LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFY-AQMLTQGVEP 73
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N +TF + K+C + GK +H++ VK GF+ DL+VR L+ +Y+ G+V+ A+++F
Sbjct: 74 NAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
+ P LV+ +M+ Y K+ E+ AR LFD M ERD WN MI GY G A
Sbjct: 130 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 189
Query: 276 LFDLM--------------------------PFRDVVSW-------------NCMIDGYA 296
LF M R V S+ ++D Y+
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G++ AR FD++ ++VV+WN ++ Y E L+LF M R P + +
Sbjct: 250 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIG 309
Query: 357 VLTACANMGVIDIGQWIHSYIQ-KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-E 414
+L+AC + G + G I + ++ + I+P + ++ + + G ++ A + NM E
Sbjct: 310 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 369
Query: 415 KNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFI 456
+ V W +++ +HG+ GEK +E+ ++ N T+I
Sbjct: 370 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQN----LANSGTYI 410
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/438 (36%), Positives = 265/438 (60%), Gaps = 13/438 (2%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C +R L++G+ +HA I FE DL + N +++MY+ CG + +A+ +F+ P D+V+W
Sbjct: 115 CTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSW 174
Query: 227 NSMIDGYVKNREVGFARELF------DFMPERDIFTWNSMI--SGYVDVGDMEAANGLFD 278
+I GY ++ + A LF F P FT +S++ SG F
Sbjct: 175 TVLISGYSQSGQASEALALFPKMLHLGFQPNE--FTLSSLLKASGTGPSDHHGRQLHAFS 232
Query: 279 LMPFRD--VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
L D V + ++D YA+ ++ A+ F+ + +NVVSWN L+A + R + +
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
RLF +M+R +P + SV TACA+ G ++ G+W+H+++ K +P + +L+ MY
Sbjct: 293 RLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMY 352
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
AK G + A+ VF + ++++VSWNS+I GY HG G +AL++F +M K PN+ TF+
Sbjct: 353 AKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFL 412
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VL+AC+H+G++ EG +YF+LM++ +KIE +V H+ +VDLLGRAG + ++ + + ++P+
Sbjct: 413 SVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 471
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
+ A+WGALL +C H N +LG A+ + EL+P D GP+VLLSNIYAS G+ + +
Sbjct: 472 KPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKV 531
Query: 577 RRIMKEKELEKAVGSSLV 594
R++MKE ++K S V
Sbjct: 532 RKMMKESGVKKEPACSWV 549
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 193/412 (46%), Gaps = 14/412 (3%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P L +L K +K+ IH + S D + +L + S+ +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILN-MYAKCGSLEEAQD 161
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + D ++ + AL+ + KM+ + N +T L K
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALF-PKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
S G+++HA +K G+++++ V +SL+ MY+ + +A+ +F ++V+WN++I
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFD--LMPFRDV 285
G+ + E LF M + FT++S+ + G +E + +
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
Query: 286 VSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+++ N +ID YAK G++ A+ F R+ +++VSWN +++ Y + E L+LF++M+
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ +PNE + +SVLTAC++ G++D GQ+ ++K +I+ V +++ + + G ++
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 460
Query: 404 LARNVFDNMTEKNVVS-WNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPN 451
A + M K + W +++ MH G A E E++ P+
Sbjct: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPH 512
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 49/289 (16%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L + D + G +P +L C + + G+ IH++IQ + D++L +L M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAKCG ++ A+++FD M K++VSW +I GY GQ +AL +F +M G PN+ T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 456 ICVLSA-----CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+L A H G L F L Y + V ++D+ R MR+++ +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHA---FSLK---YGYDMNVHVGSSLLDMYARWAHMREAKVI 263
Query: 511 VSKLPME---------AGPA-------------------------LWGALLSACSTHSNS 536
+ L + AG A + ++ +AC++ +
Sbjct: 264 FNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSL 323
Query: 537 ELGKIVAQHLMELEPRDPGPYV--LLSNIYASEGKWDEVENL-RRIMKE 582
E GK V H+++ P Y+ L ++YA G + + + RR++K+
Sbjct: 324 EQGKWVHAHVIK-SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ 371
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 262/461 (56%), Gaps = 10/461 (2%)
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
KK HA+I G + D + MY + A VFED P WN MI G+ +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 237 REVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSW 288
+ EL+ M E+ D F + + + D++ + + D+
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
++D YAK G++ +AR FD+M +R++VSW +++ Y E L FD M
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN S++SVL AC N+G + G+W HSY+ + + D+L++T+++ MY+KCG +DLAR +
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD K++V W++MI YG+HG G KA+++F +M K G P+ TF CVLSAC+H+G++
Sbjct: 977 FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF LM + I K+ +Y CMVDLLGRAG + ++ +L+ +P+E ++WG+LL
Sbjct: 1037 EEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H+N +L + +A HL L+P G +VLLSNIYA++ +W+EVE +R++M + K
Sbjct: 1097 ACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKI 1156
Query: 589 VGSSLV-HPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G SLV + + + + P + + Y+ L E+ A MK
Sbjct: 1157 QGFSLVEYDNQVHKFGVGDRSHPQWEKL-YAKLEELAAPMK 1196
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 311/591 (52%), Gaps = 17/591 (2%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV 106
DN +PI + L+ LE + F + + ++ D F S L +L + +
Sbjct: 102 DNFTIPIALKACAGLRMLELGKVIHGFAKKNDEI-----GSDMFVGS-ALVELYSKCGQM 155
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
++ F+ Q PD + +++ + NDP AL+ + + +M V + T +
Sbjct: 156 GEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSA 215
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA + +++ G VH +++ F+ DL + NSL+++Y+ G A +F P D+++W
Sbjct: 216 CAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISW 275
Query: 227 NSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
++MI Y N A LF M E+ + T S + ++E + + +
Sbjct: 276 STMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVW 335
Query: 283 R----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
+ D +ID Y K A + F R+ ++VVSW LL+ Y + + + +
Sbjct: 336 KGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGV 395
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F M+ +P+ +++ +L A + +G+ +H Y+ + +V + SL+ +Y+K
Sbjct: 396 FRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSK 455
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFIC 457
CG + A +F M ++VV W+SMI YG+HG+G +ALE+F +M K PN+ TF+
Sbjct: 456 CGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLS 515
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+LSAC+HAG+V EG FD M Y++ P EH+G MVDLLGR G + + ++++++P+
Sbjct: 516 ILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIP 575
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
AGP +WGALL AC H N E+G+ A++L L+P G Y+LLSNIYA +GKWD V LR
Sbjct: 576 AGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELR 635
Query: 578 RIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
+KE+ L+K G S+V G S + P + I Y +L ++ AQM
Sbjct: 636 TRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKI-YELLRKLEAQM 685
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 238/481 (49%), Gaps = 15/481 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++C+ + Q+H+Q+ +G+ D+F A++ L L +S+ + FD P+ +
Sbjct: 11 FQACNNGRSVSQLHSQVFKTGILHDTFFATK-LNSLYAKCASLQAARKVFDETPHPNVHL 69
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N+ ++S+ L ++ + +++T P+ K CAG+R L GK +H
Sbjct: 70 WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHG-F 128
Query: 184 VKCGFEL--DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
K E+ D+FV ++L+ +YS CG++ +A KVFE+ D V W SM+ GY +N +
Sbjct: 129 AKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188
Query: 242 ARELFDFMPERDI-----FTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
A LF M D T S++S + +++A + + L+ R D+ N ++
Sbjct: 189 ALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLL 248
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+ YAK G A N F +M ++V+SW+ ++A Y + E L LF MI +PN
Sbjct: 249 NLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSV 308
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+++S L ACA ++ G+ IH + D +ST+L+ MY KC D A ++F +
Sbjct: 309 TVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRL 368
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+K+VVSW +++ GY +G K++ +F M G P+ + +L+A + G+ +
Sbjct: 369 PKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQAL 428
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+ R V +++L + G + D+ +L + + +W ++++A
Sbjct: 429 CLHGYVVR-SGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGI 486
Query: 533 H 533
H
Sbjct: 487 H 487
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 191/406 (47%), Gaps = 37/406 (9%)
Query: 49 QRLPIVDLSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLC---TS 102
QR+ + + + T+ F + H ++ GL DS R+L K S
Sbjct: 709 QRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDS----RILTKFAIMYVS 764
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ + + + F+ I P +F+ N +++ F +L Y KMM K ++ + + FP
Sbjct: 765 FNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY-SKMMEKGLKPDKFAFPF 823
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
K CAG+ L+ GK +H +V CG DLFV +L+ MY+ CG++ AR VF+ V D
Sbjct: 824 ALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRD 883
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
LV+W SMI GY N G+ E F D+ + +I V + + A G +L
Sbjct: 884 LVSWTSMISGYAHN---GYNSETLGFF---DLMRSSGVIPNRVSILSVLLACG--NLGAL 935
Query: 283 R----------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALY 326
R D++ ++D Y+K G++ AR FD +++V W+ ++A Y
Sbjct: 936 RKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASY 995
Query: 327 VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIKPD 385
+ + LFD+M++ +P+ + VL+AC++ G+++ G+ + ++ I
Sbjct: 996 GIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARK 1055
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMH 430
+ ++ + + G + A ++ +NM E + W S++ +H
Sbjct: 1056 LSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIH 1101
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 5/213 (2%)
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
L+ + AC N + +HS + K I D +T L ++YAKC + AR VFD
Sbjct: 7 LVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEME-KRGPTPNDATFICVLSACTHAGMVLEGW 472
NV WNS + Y Q E+ L +F M G P++ T L AC M+ G
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
++ +I + +V+L + G M ++ ++ + LW ++++
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF-QRPDTVLWTSMVTGYQQ 182
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+++ E + ++ ++ P L+S + A
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSA 215
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/612 (31%), Positives = 312/612 (50%), Gaps = 62/612 (10%)
Query: 77 HTQLLVSGLSQDSFAASRVLKKL--CTSLSSVS--LSVLFFDGIQEPDAFMCNTIMKSFL 132
H + SG + + F + V+ C +L L GIQ D N+++ +++
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQ--DLVSWNSVVSAYM 339
Query: 133 MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
+D AL+ +++ + + + + CA + + G++VH ++ G D+
Sbjct: 340 WASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV 399
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER 252
FV N+++ MY+ CG++ +A KVF+ D+V+WN+M+ GY + + A LF+ M E
Sbjct: 400 FVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEE 459
Query: 253 ----DIFTWNSMISGYVDVGDMEAANGLFDLM---------------------------- 280
D+ TW ++I+GY G A +F M
Sbjct: 460 NIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG 519
Query: 281 -------------------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM--RNVVSW 319
D+ N +ID YAK + AR FD + R+VV+W
Sbjct: 520 KETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTW 579
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDA--KPNEASLMSVLTACANMGVIDIGQWIHSYI 377
+++ Y + D L+LF M + D KPN+ +L L ACA + + G+ +H+Y+
Sbjct: 580 TVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYV 639
Query: 378 QKCRIKPDVL-LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ +L ++ L+ MY+K G +D A+ VFDNM ++N VSW S++ GYGMHG+GE A
Sbjct: 640 LRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDA 699
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
L +F EM K P+ TF+ VL AC+H+GMV G +F+ M + + ++P EHY CMVD
Sbjct: 700 LRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVD 759
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
L GRAG + ++ +L++++PME P +W ALLSAC HSN ELG+ A L+ELE + G
Sbjct: 760 LWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGS 819
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIV 616
Y LLSNIYA+ +W +V +R MK ++K G S + + + V + + +
Sbjct: 820 YTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQI 879
Query: 617 YSMLGEIGAQMK 628
Y L ++ ++K
Sbjct: 880 YETLADLIQRIK 891
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 167/634 (26%), Positives = 281/634 (44%), Gaps = 90/634 (14%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI--QE 118
+ L+ C+++ +H Q ++ GL F + L + +S + ++L + +
Sbjct: 165 ITALKECNSLAHAKLLHQQSIMQGLL---FHLATNLIGTYIASNSTAYAILLLERLPPSP 221
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
F N +++ L L P + Y +M + +HYTFP + K CA + SL G
Sbjct: 222 SSVFWWNQLIRRALHLGSPRDVFTLY-RQMKSLGWTPDHYTFPFVFKACANLSSLSLGAS 280
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED---GPVWDLVTWNSMIDGYVK 235
+HA + + GF ++FV N+++ MY CG + A +F+D + DLV+WNS++ Y+
Sbjct: 281 LHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMW 340
Query: 236 NREVGFARELFDFMPER----------------------------------------DIF 255
+ A LF M R D+F
Sbjct: 341 ASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVF 400
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
N+++ Y G ME AN +F M F+DVVSWN M+ GY++ G + A + F+RM N
Sbjct: 401 VGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEEN 460
Query: 316 ----VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
VV+W ++ Y + CE L +F +M ++PN +L+S+L+AC ++G + G+
Sbjct: 461 IELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGK 520
Query: 372 WIHSYIQKCRIK--------PDVLLSTSLLTMYAKCGVMDLARNVFDNMT--EKNVVSWN 421
H Y K + D+ + L+ MYAKC ++AR +FD+++ +++VV+W
Sbjct: 521 ETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWT 580
Query: 422 SMIMGYGMHGQGEKALEMFMEMEK--RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
MI GY HG AL++F M K + PND T C L AC + G +
Sbjct: 581 VMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVL 640
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
R + + C++D+ ++G + ++ + +P + W +L++ H E
Sbjct: 641 RNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVS-WTSLMTGYGMHGRGEDA 699
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYA--SEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
V + ++ P P L +YA G D N + K G V PG
Sbjct: 700 LRVFDEMRKV-PLVPDGITFLVVLYACSHSGMVDHGINF-----FNRMSKDFG---VDPG 750
Query: 598 EFASESIVENCPPHRKCIV--YSMLGEIGAQMKM 629
P H C+V + G +G MK+
Sbjct: 751 -----------PEHYACMVDLWGRAGRLGEAMKL 773
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 275/516 (53%), Gaps = 47/516 (9%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF--ELDLFVRNSLIHMYSVCGEVLDARK 213
N TF L + C SL + K++H + V G + L++ Y+ G +DA+K
Sbjct: 2 NTQTFYFLLQKCG---SLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 58
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNRE-----------------------------VGFARE 244
VF D+V+W +I Y+ + G ++
Sbjct: 59 VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 118
Query: 245 L----------FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
L F F D N++I Y G +E A +F M +DV SW +++G
Sbjct: 119 LSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNG 178
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK--PNEA 352
+ K ++ +AR FD M MRN VSW ++ YV+ + L LF M R + K P
Sbjct: 179 FIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM-RAEGKDWPTVI 237
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++++VL+ CA++G D+G +H Y+ K + DV ++ +L+ MYAK G + LA +F M
Sbjct: 238 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEM 297
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+++V SW +MI G +HG+G ALE F +M K G PN+ T + VLSAC+HAG+V+EG
Sbjct: 298 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGR 357
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F M + + I+PK++HYGCMVDLLGRAGL+R+++EL+ +P++ +W +LLSAC
Sbjct: 358 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLV 417
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N L ++ + ++ELEP D G Y+LL NIY S +W++ R+ M+++ ++K G S
Sbjct: 418 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 477
Query: 593 LVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
V E + E+ + VY++L I QMK
Sbjct: 478 WVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMK 513
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 194/430 (45%), Gaps = 53/430 (12%)
Query: 64 LESCSTVKEFHQIHTQLLVSGL--SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDA 121
L+ C ++++ QIH + + GL S+ A ++L T L S + F+ IQ PD
Sbjct: 10 LQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTY-TQLGSPVDAQKVFNHIQNPDI 68
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV--CAGIRSLREGKKV 179
++ +L + P A S + + +F ++G V C + L G+ V
Sbjct: 69 VSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD---SFCVVGAVSACGHRKDLSNGRIV 125
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H + + D V N+LI MYS G + A VF+ + D+ +W S+++G++K ++
Sbjct: 126 HGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDI 185
Query: 240 GFARELFDFMPERDIFTWNSMISGYVD----------VGDMEAAN--------------- 274
AR +FD MP R+ +W +MI+GYV +M A
Sbjct: 186 EAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSG 245
Query: 275 ----GLFDLMPF-----------RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
G FDL DV N ++D YAK G + A F M R+V SW
Sbjct: 246 CADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSW 305
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+++ L F M + PNE +L+SVL+AC++ G++ G+ + + +
Sbjct: 306 TTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQ 365
Query: 380 CR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GE 434
C IKP + ++ + + G++ A+ + ++M K + V W S++ +HG E
Sbjct: 366 CHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAE 425
Query: 435 KALEMFMEME 444
A +M +E+E
Sbjct: 426 MAGKMIIELE 435
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 286/501 (57%), Gaps = 21/501 (4%)
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCA 168
++F D E + F N I+ F+ + A F +Y++M + V + +TFP + + C
Sbjct: 31 LVFRDPYHERNVFAYNAIIAGFVA--NGLAADGFQFYKRMRSVGVMPDKFTFPCVVRACC 88
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
E +K+H + K G EL++FV ++L++ Y DA KVFE+ P D+V WN+
Sbjct: 89 ---EFMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNA 145
Query: 229 MIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDM---EAANGLFDLMP 281
MI+GY K + A +F M E I FT S++S +GD+ A +G+ M
Sbjct: 146 MINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMG 205
Query: 282 FRDVVSW-NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
+ V+ N +ID Y K + A F+ + +++ SWN +++ + +C D+ LRLF
Sbjct: 206 YSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFG 265
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY-----IQKCRIKPDVLLSTSLLTM 395
+M+ P+ ++ +VL AC+++ + G+ IH Y + K DVLL+ +++ M
Sbjct: 266 KMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDM 325
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAKCG M A +FD M K+V SWN MIMGY MHG G +AL+MF M + P+ TF
Sbjct: 326 YAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTF 385
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VLSAC+HAG V +G + M+ + + P +EHY C++D+LGRAG + ++ +L ++P
Sbjct: 386 VGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIP 445
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD--PGPYVLLSNIYASEGKWDEV 573
+E LW ALL AC H N+ELG +V + + +LEP+ G Y+L+S++Y G+++E
Sbjct: 446 LEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEA 505
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
+RR MKE+ ++K G S +
Sbjct: 506 LEVRRTMKEQNVKKTPGCSWI 526
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 17/280 (6%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL L S + IH + G S A S L + +++ F+ I E
Sbjct: 181 ILSILTSMGDINNGRAIHGIVTKMGYSS-CVAVSNALIDMYGKCKHTEDALMIFEMINEK 239
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D F N+I+ + +D G L + KM+ V + T + C+ + +L G+++
Sbjct: 240 DLFSWNSIISAHEQCDDHDGTLRL-FGKMLGSRVLPDVITITAVLPACSHLAALMHGREI 298
Query: 180 HARIVKCGFEL-----DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
H ++ G D+ + N+++ MY+ CG + +A +F+ D+ +WN MI GY
Sbjct: 299 HGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYA 358
Query: 235 KNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DV 285
+ A ++F M E D+ T+ ++S G + M +
Sbjct: 359 MHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTI 418
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ C+ID + G++ A + R+ + N++ W LL
Sbjct: 419 EHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLG 458
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 390 TSLLTMYAKCGVMDLARNVF-DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
TSL+ MY++C M+ A VF D E+NV ++N++I G+ +G + + M G
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY------KIEPKVEHYGCMVDLLGRAG 502
P+ TF CV+ AC F +++I+ +E V +V+ +
Sbjct: 74 MPDKFTFPCVVRACCE----------FMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVD 123
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSA 529
D+E++ +LP E LW A+++
Sbjct: 124 GTEDAEKVFEELP-ERDVVLWNAMING 149
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 275/509 (54%), Gaps = 45/509 (8%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHM-YSVCGEVLDARKVFEDGPV 220
+L K C ++ L +K+HA+++K G D + ++ S G++ A VF
Sbjct: 1 MLDKNCTSMKDL---QKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRN 57
Query: 221 WDLVTWNSMIDGYVKNREVGFARELF-DFM-------PER-------------------- 252
+L WN++I G+ ++ A LF D M P+R
Sbjct: 58 PNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGA 117
Query: 253 -------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
D F N++++ YV+ G + A +FD DVV+WN MI G AK G
Sbjct: 118 QLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCG 177
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ +R FD+M +RN VSWN +++ YVR + E + LF RM KP+E +++S+L
Sbjct: 178 EIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLN 237
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G + G+WIH YI K + ++ T+++ MY+KCG +D A VF + +K +
Sbjct: 238 ACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSC 297
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WNS+I+G M G+G +A+ +F ++E P+ +FI VL+AC HAGMV YF LM
Sbjct: 298 WNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMS 357
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
YKIEP ++HY CMVD+LGRAGL+ ++EEL+ +P+ +WG+LLS+C + N E+
Sbjct: 358 ETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMA 417
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
K A+ + EL+P + ++LLSN+YA+ ++E R +KEK+++K G SL+
Sbjct: 418 KQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGE 477
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E + R +Y L ++G +K
Sbjct: 478 VHEFVAGGRLHPRSKDIYHALDDLGLTLK 506
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 216/440 (49%), Gaps = 48/440 (10%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMC 124
++C+++K+ +IH QL+ +GL++D+ AASRVL + ++ + L F I+ P+ F+
Sbjct: 4 KNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVW 63
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAK-FVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
NTI++ F + P A+S + + M + T+P + K A + EG ++H R+
Sbjct: 64 NTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRV 123
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E D F++N++++MY CG + +A+++F+ +D+VTWN+MI G K E+ +R
Sbjct: 124 IKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSR 183
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP---------------------- 281
LFD M R+ +WNSMISGYV G A LF M
Sbjct: 184 RLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLG 243
Query: 282 -------FRDVVSWN----------CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
D + N +ID Y+K G++ A F + + WN L+
Sbjct: 244 ALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLIL 303
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQKCRIK 383
E +RLF ++ + KP+ S + VLTAC + G++D + + + +I+
Sbjct: 304 GLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIE 363
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
P + + ++ + + G+++ A + +M + + W S++ +G +EM +
Sbjct: 364 PSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGN----IEMAKQ 419
Query: 443 MEKRGPT--PNDATFICVLS 460
KR PN+++ +LS
Sbjct: 420 AAKRVNELDPNESSSFILLS 439
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 306/577 (53%), Gaps = 51/577 (8%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L C+ + F Q+H ++ GL +D F + L + F+G+ E +
Sbjct: 138 LSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQN-CLIHFYAECGHMDHGHKVFEGMSERN 196
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+++ + + P A+S ++E M+ + + T + CA +R L G++V
Sbjct: 197 VVSWTSLICGYARGDRPKEAVSLFFE-MVEAGIRPSSVTMVCVISACAKLRDLDMGERVC 255
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A I + G +L+ + N+L+ MY CG + A+++F++ +LV +N+++ Y + G
Sbjct: 256 AYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ---G 312
Query: 241 FARELFDFM---------PER--------------DIF---------------TWNSM-- 260
ARE + P+R D+F W+S+
Sbjct: 313 LAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGN 372
Query: 261 --ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
I Y+ G E A +FDLM + VVSWN + G+ + G+V SA F+++ RN V
Sbjct: 373 VIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVF 432
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
WN +++ V+ + + + LF M K + ++M + +AC +G ++ +W+H+YI+
Sbjct: 433 WNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIE 492
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K I D+ L+T+L+ M+A+CG A VF+ MTE++V +W + I M G GE A
Sbjct: 493 KNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATG 552
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
+F +M +G P+ F+ VL+AC+H G V +G F LM+ + I P++EHYGCMVDLL
Sbjct: 553 LFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLL 611
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV 558
GRAGL+R++ +L+ +PME +WG+LL+AC H N E+ A+ + EL P+ G +V
Sbjct: 612 GRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHV 671
Query: 559 LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
LLSNIYAS GKW +V +R ++EK + K GSS V
Sbjct: 672 LLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQ 708
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 238/522 (45%), Gaps = 49/522 (9%)
Query: 62 QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV------LFFDG 115
+ L C T+ + Q+H Q+ +GL Q ++++ S SL LF +
Sbjct: 30 ESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKED 89
Query: 116 IQEPDA-FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
++ DA FM N++++ + A+ Y +M+ V NHYTFP + C I +
Sbjct: 90 VRSDDALFMLNSLIRGYSSAGLGREAI-LLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFC 148
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG +VH +VK G E D+F++N LIH Y+ CG + KVFE ++V+W S+I GY
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYA 208
Query: 235 KNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANG----LFDLMPFRDVV 286
+ A LF M E I T +IS + D++ + +L + V
Sbjct: 209 RGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKV 268
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N ++D Y K G + +A+ FD RN+V +N +L+ Y R E L + D M++
Sbjct: 269 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQG 328
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
+P+ +++S ++A A + + G+ H Y+ + ++ + ++ MY KCG ++A
Sbjct: 329 PRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMAC 388
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEK------------------------------- 435
VFD M+ K VVSWNS+ G+ +G E
Sbjct: 389 RVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFED 448
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+E+F EM+ G + T + + SAC + G W +++ I + +V
Sbjct: 449 AIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEK-NGIPCDMRLNTALV 507
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
D+ R G + + ++ +K+ E + W A + + N E
Sbjct: 508 DMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGE 548
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 305/554 (55%), Gaps = 23/554 (4%)
Query: 74 HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
++H +L+ G D + + L + + + L+ FD + D N+++ + +
Sbjct: 144 QKVHGKLIKIGFDLDVYVCN-FLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQI 202
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
D +L + E + LG C+ LR G ++H ++++ ELD+
Sbjct: 203 DGDGLSSLMCFKEMLRLGNKADRFGMISALG-ACSIEHCLRSGMEIHCQVIRSELELDIM 261
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V+ SLI MY CG+V A +VF ++V WN+MI G ++ +V +P D
Sbjct: 262 VQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKV---------IP--D 310
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDL------MPFRDVVSWNCMIDGYAKIGNVTSARNC 307
+ T +++ G + + +P+ +V ++D Y K G + A +
Sbjct: 311 VITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPY--LVLETALVDMYGKCGELKLAEHV 368
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F++M +N+VSWN ++A YV+ + Y E L++F ++ KP+ ++ SVL A A +
Sbjct: 369 FNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASR 428
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+ IHSYI K + + +S +++ MYAKCG + AR FD M K+VVSWN+MIM Y
Sbjct: 429 SEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAY 488
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+HG G +++ F EM +G PN +TF+ +L+AC+ +G++ EGW +F+ M+ Y I+P
Sbjct: 489 AIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPG 548
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+EHYGCM+DLLGR G + +++ + ++P+ +WG+LL+A H++ L ++ A+H++
Sbjct: 549 IEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHIL 608
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
L+ + G YVLLSN+YA G+W++V+ ++ +MKE+ L K VG S+V SES +
Sbjct: 609 SLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDING-RSESFINQ 667
Query: 608 CPPHRKC-IVYSML 620
H ++Y +L
Sbjct: 668 DRSHAHTNLIYDVL 681
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 191/368 (51%), Gaps = 26/368 (7%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ + D F+ N I++ + A+ FYY +M + + +++TFP + K C + +
Sbjct: 81 FEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYY-RMECEGIRSDNFTFPFVIKACGELLA 139
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G+KVH +++K GF+LD++V N LI MY G + A KVF++ PV DLV+WNSM+ G
Sbjct: 140 LMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSG 199
Query: 233 YVKNREVGFA-----RELFDFMPERDIFTWNSMISG----YVDVGDMEAANGLFDLMPFR 283
Y + + G + +E+ + D F S + + ME +
Sbjct: 200 YQIDGD-GLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELEL 258
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D++ +ID Y K G V A F+R+ +N+V+WN ++ ++ D++I
Sbjct: 259 DIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIG----------GMQEDDKVI 308
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
P+ +++++L +C+ G + G+ IH + + P ++L T+L+ MY KCG +
Sbjct: 309 -----PDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELK 363
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
LA +VF+ M EKN+VSWN+M+ Y + Q ++AL+MF + P+ T VL A
Sbjct: 364 LAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVA 423
Query: 464 HAGMVLEG 471
EG
Sbjct: 424 ELASRSEG 431
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 2/236 (0%)
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
G+ + G + +A + F++M + WN+++ Y + E + + RM + + +
Sbjct: 67 GFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFT 126
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
V+ AC + + +GQ +H + K DV + L+ MY K G ++LA VFD M
Sbjct: 127 FPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMP 186
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+++VSWNSM+ GY + G G +L F EM + G + I L AC+ + G
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGME 246
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ R ++E + ++D+ G+ G + +E + +++ W A++
Sbjct: 247 IHCQVIR-SELELDIMVQTSLIDMYGKCGKVDYAERVFNRI-YSKNIVAWNAMIGG 300
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
+P+ L T L + + G+M A ++F+ M + WN +I GY +G ++A++ +
Sbjct: 55 RPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYR 114
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGR 500
ME G ++ TF V+ AC ++ G + ++ KI ++ Y C ++D+ +
Sbjct: 115 MECEGIRSDNFTFPFVIKACGELLALMVGQ---KVHGKLIKIGFDLDVYVCNFLIDMYLK 171
Query: 501 AGLMRDSEELVSKLPMEAGPALWGALLSA 529
G + +E++ ++P+ + W +++S
Sbjct: 172 IGFIELAEKVFDEMPVRDLVS-WNSMVSG 199
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 301/563 (53%), Gaps = 18/563 (3%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H + +G + D+F AS L KL LS + FD + PD + NT++
Sbjct: 136 LHGLSVAAGYAADTFVAS-ALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL---- 190
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
AL + + A V + T + A + G+ VH VKCG V
Sbjct: 191 PGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVV 250
Query: 196 NSLIHMYSVCGEVLDARKVFE--DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER- 252
L+ +YS CG++ A+ +F+ D P DLV +N++I GY N V + ELF +
Sbjct: 251 TGLMSLYSKCGDMDSAQFLFDRMDNP--DLVAYNALISGYSVNGMVESSVELFKELTASG 308
Query: 253 ---DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSAR 305
+ T ++I Y G A L + D + + Y ++ ++ SAR
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESAR 368
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
+ FD M + + SWN +++ Y + + LF M + +PN ++ S L+ACA++G
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ +G+W+H I K +++ +V + T+L+ MYAKCG + AR++FD M KNVVSWN+MI
Sbjct: 429 ALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMIS 488
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GYG+HGQG +AL+++ +M P +TF+ V+ AC+H G+V EG F +M Y+I
Sbjct: 489 GYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRIT 548
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA-GPALWGALLSACSTHSNSELGKIVAQ 544
P +EH CMVDLLGRAG + ++ EL+S+ P A GP +WGALL AC H NS+L K+ +Q
Sbjct: 549 PGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQ 608
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESI 604
L EL+ + G YVLLSN+Y S+ + E +R+ K ++L K G +L+ G+ +
Sbjct: 609 KLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFM 668
Query: 605 VENCPPHRKCIVYSMLGEIGAQM 627
+ + +YS L + A+M
Sbjct: 669 AGDHLHPQSEAIYSYLERLTAKM 691
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 329/579 (56%), Gaps = 14/579 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ-- 117
+L+ S ++ IH ++ +G + F + ++ + VS + F G++
Sbjct: 168 VLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVD-MYAKCKCVSEAEFLFKGLEFD 226
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ + ++ + D + A+ F+ M A+ VE N YTFP + C+ + + G+
Sbjct: 227 RKNHVLWTAMVTGYAQNGDGYKAVEFF-RYMHAQGVECNQYTFPTILTACSSVLARCFGE 285
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
+VH IVK GF +++V+++L+ MY+ CG++ +A+ + E D+V+WNS++ G+V++
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 345
Query: 238 EVGFARELFDFMPER----DIFTWNSMISGYVDVGDM--EAANGLFDLMPFRD--VVSWN 289
A LF M R D +T+ S+++ V VG + ++ +GL F + +VS N
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSINPKSVHGLIIKTGFENYKLVS-N 403
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++D YAK G++ A F++M ++V+SW L+ Y + + E L++F M P
Sbjct: 404 ALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNP 463
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
++ + S+L+ACA + +++ G+ +H K ++ + SL+ MYAKCG +D A +F
Sbjct: 464 DQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIF 523
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
+M K+V++W ++I+GY +G+G +L+ + M G P+ TFI +L AC+HAG+V
Sbjct: 524 VSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVD 583
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG YF M ++Y I+P EHY CM+DL GR+G + ++++L+ ++ ++ +W +LLSA
Sbjct: 584 EGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H N EL + A +L ELEP + PYV+LSN+Y++ KW++V +R++MK K + K
Sbjct: 644 CRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEP 703
Query: 590 GSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G S + + I ++ R+ +Y+ + EI ++K
Sbjct: 704 GCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIK 742
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 225/476 (47%), Gaps = 53/476 (11%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ +T + +VC+ + ++ G+ +H +VK GFE ++FV L+ MY+ C V +A +F
Sbjct: 161 SQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLF 220
Query: 216 EDGPVWDL---VTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVG 268
+ G +D V W +M+ GY +N + A E F +M + + +T+ ++++ V
Sbjct: 221 K-GLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVL 279
Query: 269 DM---EAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
E +G F +V + ++D YAK G++ +A+N + M +VVSWN L+
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMV 339
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+VR E LRLF M + K ++ + SVL C +G I+ + +H I K +
Sbjct: 340 GFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFEN 397
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
L+S +L+ MYAK G MD A VF+ M EK+V+SW S++ GY + E++L++F +M
Sbjct: 398 YKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMR 457
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEG-WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
G P+ +LSAC ++ G + D ++ + V Y +V + + G
Sbjct: 458 VTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSV--YNSLVAMYAKCGC 515
Query: 504 MRDSEELVSKLPME---------AGPALWG-------------------------ALLSA 529
+ D++ + + ++ G A G LL A
Sbjct: 516 LDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFA 575
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGP--YVLLSNIYASEGKWDEVENLRRIMKEK 583
CS + G+ Q + ++ PGP Y + +++ GK DE + L M K
Sbjct: 576 CSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVK 631
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 2/212 (0%)
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
I+ N +++ G + A LFD MP +D SWN MI Y +G + AR FD
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
++ ++W+ +++ Y + E LF M K ++ +L SVL C+++G+I G+ I
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT--EKNVVSWNSMIMGYGMHG 431
H ++ K + +V + T L+ MYAKC + A +F + KN V W +M+ GY +G
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
G KA+E F M +G N TF +L+AC+
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACS 276
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 185/430 (43%), Gaps = 76/430 (17%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI--------------------- 230
++ N L++ S G+V DARK+F+ P D +WN+MI
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 231 ----------DGYVKNREVGFARELFDFMPERDI-------FTWNSMIS-----GYVDVG 268
GY K G E FD + FT S++ G + G
Sbjct: 125 KSSITWSSIISGYCK---FGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTG 181
Query: 269 DMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCM--RNVVSWNILLAL 325
+M +G F +V ++D YAK V+ A F + +N V W ++
Sbjct: 182 EM--IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTG 239
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y + D + + F M + N+ + ++LTAC+++ G+ +H +I K +
Sbjct: 240 YAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN 299
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
V + ++L+ MYAKCG + A+N+ + M + +VVSWNS+++G+ HG E+AL +F M
Sbjct: 300 VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHG 359
Query: 446 RGPTPNDATFICVLSAC---------THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
R +D TF VL+ C H ++ G+ + L+ +VD
Sbjct: 360 RNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN------------ALVD 407
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSA-CSTHSNSELGKIVAQHLMELEPRDPG 555
+ + G M + + K+ +E W +L++ +S+ E KI M + +P
Sbjct: 408 MYAKTGDMDCAYTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCD--MRVTGVNPD 464
Query: 556 PYVLLSNIYA 565
+++ S + A
Sbjct: 465 QFIVASILSA 474
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/474 (36%), Positives = 268/474 (56%), Gaps = 15/474 (3%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA RSL + + +HA + F +F+ NSLIH+Y CG V DAR+VF+ P D+ +
Sbjct: 73 ACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCS 132
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMI-----SGYVDVGD-MEAANG 275
W S+I GY +N +G + + + FT+ S++ S +G+ + A
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+D DV + ++D YA+ G + A FD++ +N VSWN L+A + R D
Sbjct: 193 KYDWHD--DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L +F M R + + SV +A A +G ++ G+W+H+++ K + + ++L M
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAK G M AR VFD + +K+VV+WNSM+ + +G G +A+ F EM K G N TF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ +L+AC+H G+V EG YFD+M+ Y +EP+++HY +VDLLGRAGL+ D+ + K+P
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
M+ A+WGALL +C H N+++G+ A H+ EL+P D GP VLL NIYAS G+WD
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489
Query: 576 LRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH-RKCIVYSMLGEIGAQMK 628
+R++MK ++K S V E + V N H R +Y EI Q++
Sbjct: 490 VRKMMKATGVKKEPACSWVEI-ENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 542
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 186/407 (45%), Gaps = 14/407 (3%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L H ++ ++ + IH L S + F + ++ C +V+ + FDG
Sbjct: 66 LYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYC-KCGAVADARRVFDG 124
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ D +++ + + P AL + +F + N +TF L K S
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRF-KPNGFTFASLLKAAGASASSGI 183
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++HA VK + D++V ++L+ MY+ CG + A VF+ + V+WN++I G+ +
Sbjct: 184 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 243
Query: 236 NREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLM----PFRDVVS 287
+ +F M E FT++S+ S +G +E + M
Sbjct: 244 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 303
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
N ++D YAK G++ AR FDR+ ++VV+WN +L + + E + F+ M +
Sbjct: 304 GNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 363
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
N+ + +S+LTAC++ G++ G+ +++ ++P++ +++ + + G+++ A
Sbjct: 364 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALV 423
Query: 408 VFDNMTEKNVVS-WNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
M K + W +++ MH G+ A + E++ P
Sbjct: 424 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGP 470
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
S++TACA +D + IH+++ + V L SL+ +Y KCG + AR VFD M +
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
++ SW S+I GY + ++AL + M + PN TF +L A + G
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
L + Y V ++D+ R G M + + +L + G + W AL++ + +
Sbjct: 189 ALTVK-YDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVS-WNALIAGFARKGD 246
Query: 536 SE 537
E
Sbjct: 247 GE 248
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/645 (28%), Positives = 314/645 (48%), Gaps = 108/645 (16%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L + +++ Q H Q+++ G D +++ ++L + L ++ + F +Q PD
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRL-SDLGAIYYARDIFLSVQRPD 82
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F+ N +M+ F + P +LS + + ++ N T+ +G R R G+ +H
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH 142
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---- 236
+ V G + +L + ++++ MY V DARKVF+ P D + WN+MI GY KN
Sbjct: 143 GQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 237 --------------------------------REVGFARELFDFMPERDIFTWNSMISGY 264
+E+ ++ + ++ + +++G+
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 265 VDV----GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV---- 316
+ + G ++ + LF D+V++N MI GY G + + F + +
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 317 --------VSWNILL------------------------ALYVRCKDYCECLRLFDR--- 341
VS +++L +Y + + +LFD
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 342 --------MIRG--------DA------------KPNEASLMSVLTACANMGVIDIGQWI 373
MI G DA PN ++ +L+ACA +G + +G+W+
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H ++ + + +ST+L+ MYAKCG + AR +FD MT+KN V+WN+MI GYG+HGQG
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
++AL +F EM G TP TF+CVL AC+HAG+V EG F+ M Y EP V+HY C
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVD+LGRAG ++ + + + + +E G ++W LL AC H ++ L + V++ L EL+P +
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
G +VLLSNI++++ + + +R+ K+++L KA G +L+ GE
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/589 (32%), Positives = 311/589 (52%), Gaps = 21/589 (3%)
Query: 55 DLSHPILQKLESCS---TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
+L+ P + K +CS +K +HT ++ S D F + V+ + S + +
Sbjct: 54 NLTFPSVAK--ACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVD-MYVKCSQLGFAYN 110
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F + + D N+++ F L +S + E M + + + T L ++
Sbjct: 111 LFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCE-MGIEGIRADSVTVIGLTHSALSLK 169
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE--DGPVWDLVTWNSM 229
L+ + +H+ +K G + D+ V N+ I Y+ CGE A VF+ D + V+WNSM
Sbjct: 170 DLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSM 229
Query: 230 IDGYVK----NREVGFARELF--DFMPERDIFTWNSMISGYVDV---GDMEAANGLFDLM 280
I GY ++ VGF +++ F + +V G + A+G+ +
Sbjct: 230 IAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGI-QVG 288
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
D+ N +I Y+K G++ SAR FD M + VSW ++A Y D E + LF
Sbjct: 289 CDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFS 348
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M KP+ +++S+++ C G +++G+WI +Y +K ++++ +L+ +YAKCG
Sbjct: 349 AMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCG 408
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
MD AR +F M EK++VSW ++I G ++G+ ++AL +F +M + G PN TF+ VL
Sbjct: 409 SMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQ 468
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC HAG + +GW F+LM ++YKI P ++HY CM DLLGR G ++++ E + +P +
Sbjct: 469 ACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDV 528
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W LLSAC H N +G+ VA HL ELEP+ PYV ++NIYAS GKWD V +R +M
Sbjct: 529 GIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMM 588
Query: 581 KEKELEKAVGSSLVHPGEFASESIVEN-CPPHRKCIVYSMLGEIGAQMK 628
K + K+ G SLV E VE+ C P ++Y L + QMK
Sbjct: 589 KCNKAMKSPGKSLVQVNGKTHEFTVEDRCHP-EGLLIYETLENLALQMK 636
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
Query: 303 SARNCFDRMC-MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
+A F+R + V WN + V + L LF +M + +PN + SV AC
Sbjct: 5 AATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKAC 64
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+ + + Q +H+++ K R + D+ + TS++ MY KC + A N+F M +++V SWN
Sbjct: 65 SKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWN 124
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
SMI+G+ G ++ + +F EM G + T I TH+ + L+
Sbjct: 125 SMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVI----GLTHSALSLK 169
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 223/361 (61%)
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
L F P+ +I N++I Y + A+ +FD M RD +SWN +I G+ +G +
Sbjct: 144 HLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRK 203
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A FD M R +VSW +++ Y R Y + L +F +M +P+E S++SVL ACA
Sbjct: 204 AGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQ 263
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G +++G+WIH Y + + + +L+ MY+KCG + A +FD M++ +V+SW++M
Sbjct: 264 LGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTM 323
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G HG+ +A+E+F M+K PN TF+ +LSAC HAG EG YFD M + Y
Sbjct: 324 IGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYH 383
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
IEP+VEHYGC+VD+LGRAG + + +++ K+PM+ +WG+LLS+C THSN ++ I
Sbjct: 384 IEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAM 443
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
+HL ELEP D G YVLLSNIYA KWD V +R+++K K ++K GSSL+ E
Sbjct: 444 EHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEF 503
Query: 604 I 604
+
Sbjct: 504 V 504
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 206/445 (46%), Gaps = 48/445 (10%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
L I +L + + L++C + E IH ++ LSQ SF ++++ +C + +
Sbjct: 8 LKIRELENFFVPILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVD-VCDKTEDLGYAS 66
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH------NHYTFPLLG 164
L F ++EP+ ++ N ++++ A+ FY E + K E + +TFP +
Sbjct: 67 LLFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVI 126
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K C+G+ GK+VHA + K G + ++ + N+LI MY+ C +LDA KVF+ D +
Sbjct: 127 KSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAI 186
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF-- 282
+WNS+I G+V ++ A LFD MP R I +W +MISGY +G A +F M
Sbjct: 187 SWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVG 246
Query: 283 --------------------RDVVSW-----------------NCMIDGYAKIGNVTSAR 305
+V W N +++ Y+K G + A
Sbjct: 247 VEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAY 306
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FD+M +V+SW+ ++ E + LF RM + +PN + + +L+ACA+ G
Sbjct: 307 QLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAG 366
Query: 366 VIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSM 423
+ G + S + I+P+V L+ + + G + A +V + M K + W S+
Sbjct: 367 FWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSL 426
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGP 448
+ H + A+ +E+ P
Sbjct: 427 LSSCRTHSNLDIAIIAMEHLEELEP 451
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 310/554 (55%), Gaps = 13/554 (2%)
Query: 49 QRLPIVDLSHPILQKLESCS---TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS 105
+ L +V S+ + L +C +V+E IH + G+ +D + +L C +
Sbjct: 208 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYC-KFNG 266
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
+ FD + DA NT++ + + ++ + E M+ +F + + T + +
Sbjct: 267 LIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME-MVNQF-KPDLLTITSILQ 324
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C + L GK VH ++ G+E D N LI+MY+ CG +L +++VF D V+
Sbjct: 325 ACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS 384
Query: 226 WNSMIDGYVKNREVGFARELFDFMP---ERDIFTWNSMISGYVDVGDMEAANGLF-DL-- 279
WNSMI+ Y++N A +LF M + D T+ ++S +GD+ L DL
Sbjct: 385 WNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK 444
Query: 280 MPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
M F ++V N ++D YAK G + + F+ M R++++WN ++A V +D LR+
Sbjct: 445 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 504
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
RM P+ A+++S+L C+ + G+ IH I K ++ DV + L+ MY+K
Sbjct: 505 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 564
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG + + VF M K+VV+W ++I GM+G+G+KA+ F EME G P+ F+ +
Sbjct: 565 CGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAI 624
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
+ AC+H+G+V EG YF M++ YKIEP++EHY C+VDLL R+ L+ +E+ + +P++
Sbjct: 625 IFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKP 684
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
++WGALLSAC ++E+ + V++ ++EL P D G YVL+SNIYA+ GKWD+V ++R+
Sbjct: 685 DSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRK 744
Query: 579 IMKEKELEKAVGSS 592
+K + L+K G S
Sbjct: 745 SIKARGLKKDPGCS 758
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 264/517 (51%), Gaps = 20/517 (3%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L I + L S +T + H++H+ ++ GL +++++ K S +F
Sbjct: 15 LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFG-ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ ++ N+I+++ L N F ALS Y E + ++ + YTFP + CAG+
Sbjct: 75 SPSNNVYLWNSIIRA-LTHNGLFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFE 132
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
K +H R++ GF DL++ N+LI MY ++ ARKVFE+ P+ D+V+WNS+I GY
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 235 KNREVGFARELF----DFMPERDIFTWNSMISGYVDVGDMEAAN---GLFDLMPF-RDVV 286
N A E++ + D +T +S++ +G +E + GL + + +DV+
Sbjct: 193 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 252
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N ++ Y K + R FD+M +R+ VSWN ++ Y + Y E ++LF M+
Sbjct: 253 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-Q 311
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KP+ ++ S+L AC ++G ++ G+++H Y+ + D S L+ MYAKCG + ++
Sbjct: 312 FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQ 371
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
VF M K+ VSWNSMI Y +G ++A+++F +M K P+ T++ +LS T G
Sbjct: 372 EVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLG 430
Query: 467 -MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
+ L + DL + + V + +VD+ + G M DS ++ + W
Sbjct: 431 DLHLGKELHCDLAKMGFNSNIVVSN--TLVDMYAKCGEMGDSLKVFENMKAR-DIITWNT 487
Query: 526 LLSACSTHSNSELG-KIVAQHLMELEPRDPGPYVLLS 561
++++C + LG +++++ M E P +LS
Sbjct: 488 IIASCVHSEDCNLGLRMISR--MRTEGVTPDMATMLS 522
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 224/492 (45%), Gaps = 38/492 (7%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DG 218
F + + A + + K+H+ I+ G + LI Y+ + + VF
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFD----FMPERDIFTWNSMISGYVDVGDMEAAN 274
P ++ WNS+I N A L+ + D +T+ S+I+ + D E A
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 275 GLFDL---MPF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ D M F D+ N +ID Y + ++ AR F+ M +R+VVSWN L++ Y
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
+ E L ++ R P+ ++ SVL AC +G ++ G IH I+K IK DV+++
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
LL+MY K + R +FD M ++ VSWN+MI GY G E+++++FMEM + P
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-P 314
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLM-QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
+ T +L AC H G + G + D M Y+ + + ++++ + G + S+E
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQE 372
Query: 510 LVSKLPMEAGPALWGALLSA-CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+ S + + + W ++++ S E K+ +++P D YV+L ++ G
Sbjct: 373 VFSGMKCKDSVS-WNSMINVYIQNGSFDEAMKLFKMMKTDVKP-DSVTYVMLLSMSTQLG 430
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ L K + L G F S +V N +Y+ GE+G +K
Sbjct: 431 -------------DLHLGKELHCDLAKMG-FNSNIVVSNTLVD----MYAKCGEMGDSLK 472
Query: 629 ----MCRRDVAS 636
M RD+ +
Sbjct: 473 VFENMKARDIIT 484
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 230/375 (61%), Gaps = 1/375 (0%)
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+ F F + + T N++I Y ++ A+ LFD M R +SWN +I G+ ++G +
Sbjct: 120 QFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRR 179
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FD M R +VSW +++ Y R Y + L +F M +P+EAS++SVL ACA
Sbjct: 180 ARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAK 239
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G ++ G+WIH + + + + +L+ MY KCG +D A +FD M ++V+SW++M
Sbjct: 240 LGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTM 299
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G HG+ +A+ +F M++ PN TF+ +LSAC HAG EG YFD M++ +
Sbjct: 300 IGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFH 359
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
IEP++EHYG +VDLLGRAG + + ++V K+PM+ +WG+LLS+C TH N E+ I
Sbjct: 360 IEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAM 419
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
+HL ELEP D G YVLLSNIYA GKWD+V +R++++ K ++K G SL+ A E
Sbjct: 420 EHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEF 479
Query: 604 IV-ENCPPHRKCIVY 617
+ ++ P+ K I +
Sbjct: 480 VSGDDSKPYSKEIFW 494
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 199/427 (46%), Gaps = 52/427 (12%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF 131
E + H ++ LSQ +F ++++ +C + + F + +P+A++ N ++++
Sbjct: 3 ELKKNHALVIKYALSQSNFLVTKMID-VCDRNEDMDYASFLFKEVIDPNAYLYNAMIRA- 60
Query: 132 LMLNDPFGALSFYYEKMMAKF---------VEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
N + +Y++M+ ++ + + +TFP + K CA + GK+VHA+
Sbjct: 61 CTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQ 120
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
K G + L N+LI MY+ C +LDA +F++ ++WN +I G+V+ ++ A
Sbjct: 121 FFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRA 180
Query: 243 RELFDFMPERDIFTWNSMISGYVDVG----------DMEAAN------GLFDLMP----- 281
R LFD MP R I +W ++ISGY +G +M+ A + ++P
Sbjct: 181 RALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKL 240
Query: 282 ------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
R N +I+ Y K G + A FD+M R+V+SW+ ++
Sbjct: 241 GALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMI 300
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRI 382
E + +F+RM + + KPN + + +L+ACA+ G + G ++K I
Sbjct: 301 GGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHI 360
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFM 441
+P++ SL+ + + G + A ++ + M K + W S++ H E A+
Sbjct: 361 EPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAME 420
Query: 442 EMEKRGP 448
+E+ P
Sbjct: 421 HLEELEP 427
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/474 (36%), Positives = 268/474 (56%), Gaps = 15/474 (3%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA RSL + + +HA + F +F+ NSLIH+Y CG V DAR+VF+ P D+ +
Sbjct: 73 ACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCS 132
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMI-----SGYVDVGD-MEAANG 275
W S+I GY +N +G + + + FT+ S++ S +G+ + A
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+D DV + ++D YA+ G + A FD++ +N VSWN L+A + R D
Sbjct: 193 KYDWHD--DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L +F M R + + SV +A A +G ++ G+W+H+++ K + + ++L M
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAK G M AR VFD + +K+VV+WNSM+ + +G G +A+ F EM K G N TF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ +L+AC+H G+V EG YFD+M+ Y +EP+++HY +VDLLGRAGL+ D+ + K+P
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
M+ A+WGALL +C H N+++G+ A H+ EL+P D GP VLL NIYAS G+WD
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489
Query: 576 LRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH-RKCIVYSMLGEIGAQMK 628
+R++MK ++K S V E + V N H R +Y EI Q++
Sbjct: 490 VRKMMKATGVKKEPACSWVEI-ENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 542
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 186/407 (45%), Gaps = 14/407 (3%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L H ++ ++ + IH L S + F + ++ C +V+ + FDG
Sbjct: 66 LYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYC-KCGAVADARRVFDG 124
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ D +++ + + P AL + +F + N +TF L K S
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRF-KPNGFTFASLLKAAGASASSGI 183
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++HA VK + D++V ++L+ MY+ CG + A VF+ + V+WN++I G+ +
Sbjct: 184 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 243
Query: 236 NREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLM----PFRDVVS 287
+ +F M E FT++S+ S +G +E + M
Sbjct: 244 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 303
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
N ++D YAK G++ AR FDR+ ++VV+WN +L + + E + F+ M +
Sbjct: 304 GNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 363
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
N+ + +S+LTAC++ G++ G+ +++ ++P++ +++ + + G+++ A
Sbjct: 364 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALV 423
Query: 408 VFDNMTEKNVVS-WNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
M K + W +++ MH G+ A + E++ P
Sbjct: 424 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGP 470
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
S++TACA +D + IH+++ + V L SL+ +Y KCG + AR VFD M +
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
++ SW S+I GY + ++AL + M + PN TF +L A + G
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
L + Y V ++D+ R G M + + +L + G + W AL++ + +
Sbjct: 189 ALTVK-YDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVS-WNALIAGFARKGD 246
Query: 536 SE 537
E
Sbjct: 247 GE 248
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 307/568 (54%), Gaps = 17/568 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H L GL + AS L V+ + FD + E D N ++
Sbjct: 87 QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
A++ +M+ + V + T + +C + +H VK G +LFV
Sbjct: 147 TRAADAVTLL-GRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFV 205
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
N+LI +Y G + +A VF + DLVTWNS+I + +V A ELF M E
Sbjct: 206 CNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGV 265
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSAR 305
D+ T S+ S GD A + + R D+++ N M+D YAK+ + +A+
Sbjct: 266 CPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQ 325
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANM 364
FD + R+VVSWN L+ Y++ E +R+++ M + KP + + +SVL A + +
Sbjct: 326 KVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYL 385
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G + G +H+ K + DV ++T L+ +YAKCG + A +F++M ++ WN++I
Sbjct: 386 GGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAII 445
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
G G+HG G KAL +F +M++ P+ TF+ +L+AC+HAG+V +G +FDLMQ +Y I
Sbjct: 446 AGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGI 505
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
P +HY CMVD+LGRAG + ++ E + +P++ A+WGALL AC H N E+GK+ +Q
Sbjct: 506 VPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 565
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGE---FA 600
+L EL+P + G YVL+SN+YA GKWD V+ +R +++ + L+K G SS+ G F
Sbjct: 566 NLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFY 625
Query: 601 SESIVENCPPHRKCIVYSMLGEIGAQMK 628
S + E P H + + L ++ A+MK
Sbjct: 626 SGTQTEPHPQHEE--IQRGLHDLLAKMK 651
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 290/539 (53%), Gaps = 16/539 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C TV + ++IH L G D + A+ ++ L + +V + + FD + D
Sbjct: 160 LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIH-LYSRYKAVGNARILFDEMPVRDMGS 218
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + AL+ + + T L C G +H+
Sbjct: 219 WNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E +LFV N LI +Y+ G + D +KVF+ V DL++WNS+I Y N + A
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 244 ELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGL--FDLMP---FRDVVSWNCMIDG 294
LF M + D T S+ S +GD+ A + F L D+ N ++
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEAS 353
YAK+G V SAR F+ + +V+SWN +++ Y + E + +++ M G+ N+ +
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+SVL AC+ G + G +H + K + DV + TSL MY KCG ++ A ++F +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
N V WN++I +G HG GEKA+ +F EM G P+ TF+ +LSAC+H+G+V EG W
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
F++MQ Y I P ++HYGCMVD+ GRAG + + + + + ++ ++WGALLSAC H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
N +LGKI ++HL E+EP G +VLLSN+YAS GKW+ V+ +R I K L K G S
Sbjct: 634 GNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 261/518 (50%), Gaps = 22/518 (4%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNT 126
C+ ++ +H +L+VS Q+ +++++ C L +V+L+ FD IQ D + N
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCY-LGNVALARHTFDHIQNRDVYAWNL 122
Query: 127 IMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC 186
++ + + + + M++ + ++ TFP + K C R++ +G K+H +K
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKF 179
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
GF D++V SLIH+YS V +AR +F++ PV D+ +WN+MI GY ++ A L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS----WNCMIDGYAKIGNVT 302
+ + D T S++S + GD + + S N +ID YA+ G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+ FDRM +R+++SWN ++ Y + + LF M +P+ +L+S+ + +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 363 NMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+G I + + + ++K D+ + +++ MYAK G++D AR VF+ + +V+SWN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGP-TPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
++I GY +G +A+EM+ ME+ G N T++ VL AC+ AG + +G L R
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG---MKLHGR 476
Query: 481 IYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ K ++ + + D+ G+ G + D+ L ++P W L++ H + E
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEK 535
Query: 539 GKIVAQHLME--LEPRDPGPYVLLSNIYAS----EGKW 570
++ + +++ ++P LLS S EG+W
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
>gi|302784086|ref|XP_002973815.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
gi|300158147|gb|EFJ24770.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
Length = 564
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 262/464 (56%), Gaps = 12/464 (2%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E A+ N +++ ++ N F + +E+M + + L G V AG
Sbjct: 107 LFDAMPERTAYSWNIMIQGYVD-NSRFQSALAAFERMPQRSTAS--WNTVLAGLVAAG-- 161
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
LRE + R+ + DL N+++ Y G + AR VF+ P + V WN+++
Sbjct: 162 HLREAE----RVFEATPHRDLHAHNTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQ 217
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
YV+N ++ A+ FD P RD+ +WN+M+ G+ + G ++ A LF MP RDVVS +
Sbjct: 218 AYVQNGQLSTAKATFDVSPCRDVASWNAMMQGFAEEGQLQDAELLFQRMPKRDVVSATAL 277
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+ YA+ G++T AR FD + +R+ ++WN ++A Y + + L LF M +
Sbjct: 278 VVAYARHGHITQARALFDGLPVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDH 337
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRI-KPDVLLSTSLLTMYAKCGVMDLARNVFD 410
ASL S L ACA + + G+ IHS I + + +++TSL+TMYA+C + A+ FD
Sbjct: 338 ASLSSALDACATLAALREGKLIHSSILHSELFHSNTIVATSLITMYARCARLCEAKRAFD 397
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+T+++V WN+M+ Y +G +++LE+F ME G P A+FIC+L++C+H G++ E
Sbjct: 398 GLTKRDVPCWNTMVAAYSQNGLFQESLEIFRTMEVEGHKPQSASFICILTSCSHGGLLTE 457
Query: 471 GWWYFDLMQRI--YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
WYF +Q + + + P V+HY C++DLL R G + +EEL++ +P E W ALL
Sbjct: 458 ALWYFTALQLVEDHGVVPTVDHYICIIDLLARIGWLHQAEELLNTMPFEPDSVAWMALLG 517
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
C ++ + G VA+H+ +L+PR P YVLLSN +AS DE
Sbjct: 518 GCKGQNDVQTGARVAKHVFQLQPRTPALYVLLSNTHASNAVEDE 561
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 166/384 (43%), Gaps = 51/384 (13%)
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSM 260
MY CG + DAR F+ + +WN +I Y +N ++ AR+ FD MP R TWN++
Sbjct: 1 MYGACGSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTL 60
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
++ Y G M + LF MP R +V+WN +++ YA G + A+ FD M R SWN
Sbjct: 61 LTAYARAGHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAYSWN 120
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC 380
I++ YV + L F+RM + + AS +VL G + + + +
Sbjct: 121 IMIQGYVDNSRFQSALAAFERM----PQRSTASWNTVLAGLVAAGHLREAE----RVFEA 172
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN------------------------ 416
D+ ++++ Y K G + AR+VFD + +N
Sbjct: 173 TPHRDLHAHNTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAKATF 232
Query: 417 -------VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
V SWN+M+ G+ GQ + A +F M KR A + A G +
Sbjct: 233 DVSPCRDVASWNAMMQGFAEEGQLQDAELLFQRMPKRDVVSATALVV----AYARHGHIT 288
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP---ALWGAL 526
+ FD + I + M+ +AGL D+ L + +EA P A +
Sbjct: 289 QARALFDGLPVRDTIA-----WNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSA 343
Query: 527 LSACSTHSNSELGKIVAQHLMELE 550
L AC+T + GK++ ++ E
Sbjct: 344 LDACATLAALREGKLIHSSILHSE 367
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 289/497 (58%), Gaps = 19/497 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + + + ++ F L A+ + + +++ +V + +T + CA +
Sbjct: 102 FDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVP-DRFTLSGVVSACAEMGL 160
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L G++ H ++K G +LD+ V SL+ MY+ C G V DARKVF+ PV ++++W ++
Sbjct: 161 LSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 220
Query: 230 IDGYVK----NREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP 281
I GYV+ +RE A ELF M + + FT++S++ ++ D+ ++ L+
Sbjct: 221 ITGYVQSGGCDRE---AIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVV 277
Query: 282 FRDVVSWNC----MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
+ S NC +I Y++ GN+ +AR FD + +N+VS+N ++ Y + + E
Sbjct: 278 KMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFE 337
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
LF+ + N + S+L+ +++G I G+ IHS I K K ++ + +L++MY+
Sbjct: 338 LFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYS 397
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
+CG ++ A VF+ M + NV+SW SMI G+ HG +ALE F +M + G +PN+ T+I
Sbjct: 398 RCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIA 457
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
VLSAC+H G++ EG +F M+ + I P++EHY C+VDLLGR+G + ++ ELV+ +P +
Sbjct: 458 VLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFK 517
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A + L AC H N +LGK A+ ++E +P DP Y+LLSN++AS G+W+EV +R
Sbjct: 518 ADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIR 577
Query: 578 RIMKEKELEKAVGSSLV 594
+ MKE+ L K G S +
Sbjct: 578 KKMKERNLTKEAGCSWI 594
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 216/419 (51%), Gaps = 33/419 (7%)
Query: 137 PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLFVR 195
F A+S +++ + F N Y F + + C+ ++ GK + ++K G FE D+ V
Sbjct: 23 AFEAISAFFDMLECGFYP-NEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVG 81
Query: 196 NSLIHMY-SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD------- 247
+LI M+ G++ A KVF+ P ++VTW MI + +++GF+R+ D
Sbjct: 82 CALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF---QQLGFSRDAVDLFLDMVL 138
Query: 248 --FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKI--- 298
++P+R FT + ++S ++G + L+ DV ++D YAK
Sbjct: 139 SGYVPDR--FTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVAD 196
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMS 356
G+V AR FDRM + NV+SW ++ YV+ C E + LF M++G KPN + S
Sbjct: 197 GSVDDARKVFDRMPVHNVMSWTAIITGYVQSGG-CDREAIELFLEMVQGQVKPNHFTFSS 255
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL ACAN+ I +G+ +++ + K R+ + SL++MY++CG M+ AR FD + EKN
Sbjct: 256 VLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKN 315
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+VS+N+++ Y E+A E+F E+E G N TF +LS + G + +G
Sbjct: 316 LVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGE---Q 372
Query: 477 LMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+ RI K K + C ++ + R G + + ++ +++ + W ++++ + H
Sbjct: 373 IHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKH 430
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 32/342 (9%)
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPERDIFTWNSMISGYVDVGDME 271
G DLV+W+++I Y N + A F F P FT + + ++
Sbjct: 2 GNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFT--GVFRACSNKENIS 59
Query: 272 AANGLFDLM----PFRDVVSWNC-MIDGYAK-IGNVTSARNCFDRMCMRNVVSWNILLAL 325
+F + F V C +ID + K G++ SA FDRM RNVV+W +++
Sbjct: 60 LGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITR 119
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ + + + LF M+ P+ +L V++ACA MG++ +G+ H + K + D
Sbjct: 120 FQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD 179
Query: 386 VLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK-ALEMFM 441
V + SL+ MYAKC G +D AR VFD M NV+SW ++I GY G ++ A+E+F+
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFL 239
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK--IEPKVEHYGC----MV 495
EM + PN TF VL AC + L W L +++Y ++ ++ C ++
Sbjct: 240 EMVQGQVKPNHFTFSSVLKACAN----LSDIW---LGEQVYALVVKMRLASINCVGNSLI 292
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ R G M ++ + L E + +++A + NSE
Sbjct: 293 SMYSRCGNMENARKAFDVL-FEKNLVSYNTIVNAYAKSLNSE 333
>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
Length = 761
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 263/468 (56%), Gaps = 31/468 (6%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
++ FD +QE + N ++ FL D A+ F+ + E + + L + A
Sbjct: 181 ALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFM-----RMPERDSAS---LSALVA 232
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC-------GEVLDARKVFEDGPVW 221
G+ ++ G+ A+ + + L+H Y++ G V AR++F+ P +
Sbjct: 233 GL--IQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFY 290
Query: 222 D------------LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD 269
D +V+WNSMI YVK R++ AR LFD M ERD +WN+MISGYV + D
Sbjct: 291 DGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSD 350
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
ME A LF MP D ++WN MI G+A+ GN+ AR F + +N+VSWN ++A Y
Sbjct: 351 MEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENN 410
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
DY L+ +M+ KP+ +L SVL+ C+ + +G IH I K I PD+ ++
Sbjct: 411 GDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPIN 469
Query: 390 TSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
SL+TMY++CG + AR +FD + +K V+SWN+MI GY HG ALE+F M++
Sbjct: 470 NSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKV 529
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P TFI VL+AC HAG V EG +F M + IEP++EH+ +VD++GR G + ++
Sbjct: 530 RPTYITFISVLNACAHAGXVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAM 589
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
+L++ +P E A+WGALL AC H+N EL ++ A+ LM+LEP P
Sbjct: 590 DLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAP 637
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 209/468 (44%), Gaps = 70/468 (14%)
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K LDL+ N I G + +AR +F+ P ++VTWNSMI GYV+ RE+ AR+
Sbjct: 60 KNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARK 119
Query: 245 LFDFMPERDIFTWNSMISGYVDVGD--MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
LFD MP+RD+ +WN MISGYV +E LFD MP RD VSWN MI GY + G +
Sbjct: 120 LFDEMPDRDVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMD 179
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
A FD M RNVVSWN ++ +++ D + F RM D+ ASL +++
Sbjct: 180 EALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDS----ASLSALVAGLI 235
Query: 363 NMGVI---------------DIGQWIHSY------------IQKC--------------- 380
G + D G +H+Y + K
Sbjct: 236 QNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQK 295
Query: 381 ---RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
R + +V+ S++ Y K + AR +FD M E++ +SWN+MI GY E+A
Sbjct: 296 DGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAW 355
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK--VEHYGCMV 495
+F EM P P+ T+ ++S G +L + ++ P+ + + M+
Sbjct: 356 MLFQEM----PNPDTLTWNSMISGFAQKG-------NLELARALFATIPQKNLVSWNSMI 404
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPA---LWGALLSACSTHSNSELGKIVAQHLMELEPR 552
G + + EL ++ ++ ++LS CS + LG + Q + +
Sbjct: 405 AGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIP 464
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
D L +Y+ G E R I E +L+K V S G +A
Sbjct: 465 DIPINNSLITMYSRCGAIVEA---RTIFDEVKLQKEVISWNAMIGGYA 509
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 264/469 (56%), Gaps = 19/469 (4%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y M+ + ++FP + K CA + G+++H +++ G E + FV +LI MY
Sbjct: 38 YRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCK 97
Query: 205 CGEVLDARKVFEDGPVWDL--VTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMIS 262
CG V DARKVFE+ P V +N++I GY N +V A +F M E + + I
Sbjct: 98 CGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTIL 157
Query: 263 GYVDVGDM------------EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
G V + + E G + +V N I Y K G+V S R FD
Sbjct: 158 GLVPLCTVPEYLWLGRSLHGECVKG----GTYSEVAVLNSFITMYMKCGSVESGRRLFDE 213
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M ++ +++WN +++ Y + + L LF++M P+ +L+SVL++CA++G IG
Sbjct: 214 MPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 273
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
Q + ++ P+V LS +L++MYA+CG + AR VFD M K++VSW +MI YGMH
Sbjct: 274 QEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 333
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GE L +F +M KRG P+ A F+ VLSAC+H+G+ +G F M+R YK+EP EH
Sbjct: 334 GMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 393
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y C+VDLLGRAG + ++ E + +P+E A+WGALL AC H N ++ ++ ++E E
Sbjct: 394 YSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE 453
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV-HPGE 598
P + G YVL+SNIY+ + + +R +M+E+ K G S V H G+
Sbjct: 454 PMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGK 502
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 198/456 (43%), Gaps = 33/456 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL+ S S Q+H ++ G + F + ++ C +F +
Sbjct: 56 ILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSS 115
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+C + S N +F + +M V + T L +C L G+ +
Sbjct: 116 QLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSL 175
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H VK G ++ V NS I MY CG V R++F++ PV L+TWN++I GY +N
Sbjct: 176 HGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLA 235
Query: 240 GFARELFDFMPER----DIFTWNSMISGYV---------DVGDMEAANGLFDLMPFRDVV 286
ELF+ M D FT S++S +VG++ ANG +V
Sbjct: 236 YDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAP-----NVF 290
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N +I YA+ GN+ AR FD M ++++VSW ++ Y L LFD MI+
Sbjct: 291 LSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRG 350
Query: 347 AKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+P+ A + VL+AC++ G+ D G + + ++ +++P + L+ + + G +D A
Sbjct: 351 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 410
Query: 406 RNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSA 461
D+M E + W +++ +H E A +E E P + + ++S
Sbjct: 411 MEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE-----PMNIGYYVLMSN 465
Query: 462 CTHAGMVLEGWWYFDLM--QRIYKIEPK---VEHYG 492
EG W +M +R ++ +P VEH G
Sbjct: 466 IYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 501
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 17/253 (6%)
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
SWN+ L + E + L+ M+R + P+ S +L +CA++ + GQ +H +
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 377 IQK--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMGYGMHGQ 432
+ + C +P VL T+L++MY KCG+++ AR VF+ + + V +N++I GY + +
Sbjct: 76 VIRGGCEAEPFVL--TALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSK 133
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK--IEPKVEH 490
A MF M++ G + + T + ++ CT + W L K +V
Sbjct: 134 VSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYL---WLGRSLHGECVKGGTYSEVAV 190
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
+ + + G + L ++P++ G W A++S +S + L V + +++
Sbjct: 191 LNSFITMYMKCGSVESGRRLFDEMPVK-GLITWNAVISG---YSQNGLAYDVLELFEQMK 246
Query: 551 PRD--PGPYVLLS 561
P P+ L+S
Sbjct: 247 SSGVCPDPFTLVS 259
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 293/570 (51%), Gaps = 72/570 (12%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQR-LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG 84
+LP + P PKP N + L +D I+ L+ + + IH QL+ +G
Sbjct: 23 SLPFSGPS-----PKPHPNSNSNPKSLKSLDQKQ-IISLLQRSRHINQVLPIHAQLIRNG 76
Query: 85 LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY 144
SQD F +L+ C+ ++ + F P+ ++ ++ F+ + A+ Y
Sbjct: 77 HSQDPFMVFELLRS-CSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLY 135
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+M+ + + ++Y + K C +LREG++VH+R +K GF + VR ++ +Y
Sbjct: 136 -SRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGK 194
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
CGE +G AR +F+ MPE
Sbjct: 195 CGE-------------------------------LGDARRVFEEMPE------------- 210
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
DVV+ MI Y+ G V A F R+ ++ V W ++
Sbjct: 211 -------------------DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMID 251
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+VR ++ L F M + +PNE +++ VL+AC+ +G ++IG+W+HSY++K I+
Sbjct: 252 GFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIEL 311
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
++ + +L+ MY++CG +D A+ VFD M +++V+++N+MI G M+G+ +A+E+F M
Sbjct: 312 NLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMV 371
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
R P + TF+ VL+AC+H G+V G+ F M R Y++EP++EHYGCMVDLLGR G +
Sbjct: 372 GRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRL 431
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ +L+ + M + G LLSAC H N ELG+ VA+ L + D G YVLLS++Y
Sbjct: 432 EEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVY 491
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
AS GKW E +R MKE ++K G S +
Sbjct: 492 ASSGKWKEAAQVRAKMKEAGMQKEPGCSSI 521
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 287/551 (52%), Gaps = 39/551 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + P +C+T + S + L + M K PL+ K CA
Sbjct: 75 LFDAVPRPAPALCSTFLSSLSRASSHHDLLQ-TFSSMHRKGAYVPSGCVPLVFKSCALTA 133
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
S +G++VH + G D+FV +L+ Y+ G++ A VF++ PV D + N +I
Sbjct: 134 SSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCLIT 193
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM----------- 280
GY K +V AR LFD M R +WNSMI+ Y G+ A LFD M
Sbjct: 194 GYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAIT 253
Query: 281 ---------------------------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
++V+ +++ Y K + AR FDRM
Sbjct: 254 ITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQ 313
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
R+VV+W+ ++A Y + E L LF+RM D +PNE +L+ V++ACA +G ++ + I
Sbjct: 314 RDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQI 373
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+Y + R+ L ++L+ MY +CG + AR+VF M +K V++WNSMI G M+G
Sbjct: 374 GNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFA 433
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
E A+ ++ +M + G PN+ TF+ +L+ACTHAG+V +G +F+ M+R + + P+VEH C
Sbjct: 434 EDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCAC 493
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
+VDLL ++G + ++ + + + +E +W LLS+C H++ EL K+ ++ L+ +EP +
Sbjct: 494 IVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDN 553
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
YVLLSNIYA G W + +R +M+ K ++K S + + +V++ R
Sbjct: 554 SSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRS 613
Query: 614 CIVYSMLGEIG 624
+Y ++ +G
Sbjct: 614 AEIYDVIHGLG 624
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+ARN FD + + L+ R + + L+ F M R A + V +CA
Sbjct: 71 AARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCA 130
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
G+ +H + + DV + T+L+ YAK G M+ A +VFD M K+ + N
Sbjct: 131 LTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINC 190
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+I GY G +KA +F ME+R A++ +++ H G E FD M
Sbjct: 191 LITGYSKAGDVDKARRLFDGMERR----TSASWNSMIACYAHGGEFREALTLFDRM 242
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 315/588 (53%), Gaps = 15/588 (2%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L+SC+ +++ IH L + D F S ++ L T ++ +V F +PD
Sbjct: 249 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALID-LYTKCGQMNDAVKVFMEYPKPD 307
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ +I+ + P AL+F+ ++++ V + T + CA + + + G+ VH
Sbjct: 308 VVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVH 367
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ + G + L + NSL+H+Y G + +A +F + D+++W++M+ Y N
Sbjct: 368 GFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAET 427
Query: 241 FARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDL-----MPFRDVVSWNCM 291
+LF+ M ++ I T S++ + ++E + +L VS +
Sbjct: 428 DVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVS-TAL 486
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+D Y K + A + F+RM ++V++W +L + Y E + +F M+ +P+
Sbjct: 487 MDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDA 546
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+L+ +LT + +G++ +H+++ K + + + SL+ +YAKC ++ A VF
Sbjct: 547 IALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKG 606
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLE 470
MT K+VV+W+S+I YG HGQGE+AL++F +M T PN+ TFI +LSAC+H+G++ E
Sbjct: 607 MTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKE 666
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G FD+M YK++P EHY MVDLLGR G + + ++++ +PM+AGP +WGALL AC
Sbjct: 667 GINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGAC 726
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N ++G++ A++L L+P G Y+LLSNIY+ + W LRR++KEK L K VG
Sbjct: 727 RIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVG 786
Query: 591 SSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQI 638
S+V I + +Y +L ++ A+M+ D QI
Sbjct: 787 QSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 834
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 211/425 (49%), Gaps = 14/425 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+++ LE+C + Q+H+Q L +GL DSF ++ L L +S+ + F
Sbjct: 142 LVKLLETCCSKLSISQLHSQCLKAGLVHDSFIVTK-LNVLYARYASIHHAHKLFQETPHR 200
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV----EHNHYTFPLLGKVCAGIRSLRE 175
++ N +++S+ + LS + + V ++Y+ + K CAG+R L
Sbjct: 201 TVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLL 260
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK +H + K + D+FV ++LI +Y+ CG++ DA KVF + P D+V W S+I GY +
Sbjct: 261 GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQ 320
Query: 236 NREVGFARELFDFM--PER---DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
+ A F M E+ D T S+ S + + + + + + + + C
Sbjct: 321 SGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC 380
Query: 291 MIDG----YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
+ + Y K G++ +A N F M ++++SW+ ++A Y + L LF+ M+
Sbjct: 381 LANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKR 440
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KPN +++SVL ACA + ++ G IH + + +ST+L+ MY KC + A
Sbjct: 441 IKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAV 500
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
++F+ M +K+V++W + GY +G +++ +F M G P+ + +L+ + G
Sbjct: 501 DLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELG 560
Query: 467 MVLEG 471
++ +
Sbjct: 561 ILQQA 565
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-----IRGDAKP 349
YA+ ++ A F R V WN LL Y ++ E L LF +M + + +P
Sbjct: 181 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 240
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ S+ L +CA + + +G+ IH +++K RI D+ + ++L+ +Y KCG M+ A VF
Sbjct: 241 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 300
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM---EKRGPTPNDATFICVLSACTHAG 466
+ +VV W S+I GY G E AL F M EK P P T + V SAC
Sbjct: 301 MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSVASACAQLS 358
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
G ++R ++ K+ ++ L G+ G ++++ L ++
Sbjct: 359 NFKLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 405
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 281/497 (56%), Gaps = 29/497 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG-EVLD-ARK 213
NH T L+ + C+ + L K++HA++++ G D F + LI ++ LD A++
Sbjct: 35 NHPTLSLIDQ-CSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQ 90
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNRE-----VGFARELFDFMPERDIFTWNSMISGYVDVG 268
VF+ P +L TWN++I Y + + F R L D FT+ +I ++
Sbjct: 91 VFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELE 150
Query: 269 DM---EAANGL-FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
++ +A +G+ ++ DV N +I YAK G + F R+VVSWN ++
Sbjct: 151 ELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMIT 210
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+V+ E L LF M + KPN +++ VL+ACA + G+W+HSYI++ RI
Sbjct: 211 AFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXE 270
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG------------MHGQ 432
+ LS ++L MY KCG ++ A+ +FD M EK++VSW +M++GY MHG
Sbjct: 271 SLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGH 330
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
G+ A+ +F +M++ PN TF +L AC+H G+V EG +F+ M+ +Y + P V+HY
Sbjct: 331 GKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYA 390
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVD+LGRAGL+ ++ EL+ K+PM ++WGALL AC+ H N L + L+ELEP
Sbjct: 391 CMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPG 450
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPH 611
+ G YVLLSNIYA GKWD V LR++M++ L+K G S + E +V +N P
Sbjct: 451 NHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPS 510
Query: 612 RKCIVYSMLGEIGAQMK 628
K I Y+ L EI A+++
Sbjct: 511 AKKI-YAKLDEIVARLE 526
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 205/437 (46%), Gaps = 39/437 (8%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK 98
P P +N R +HP L ++ CS K+ QIH Q+L +GL D F+ASR++
Sbjct: 20 PNPNSITLNNDRY---FANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITA 76
Query: 99 LCTS-LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNH 157
S S+ + FD I P+ + NT+++++ ++P +L + + +
Sbjct: 77 AALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDK 136
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
+TFP L K + + L GK H ++K D+F+ NSLIH Y+ CGE+ +VF +
Sbjct: 137 FTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVN 196
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF 277
P D+V+WNSMI +V+ A ELF M T N +G VG + A
Sbjct: 197 XPRRDVVSWNSMITAFVQGGCPEEALELFQEME-----TQNVKPNGITMVGVLSACAKKS 251
Query: 278 DLMPFRDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
D R V S+ N M+D Y K G+V A+ FD+M +++VSW +L
Sbjct: 252 DFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLV 311
Query: 325 LYVRCKDY------------CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
Y + +Y + + LF +M KPN + ++L AC+++G+++ G+
Sbjct: 312 GYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRT 371
Query: 373 IHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMGYGMH 430
+ ++ + P V ++ + + G+++ A + + M S W +++ +H
Sbjct: 372 FFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 431
Query: 431 GQ---GEKALEMFMEME 444
E+A +E+E
Sbjct: 432 ENVVLAEQACSQLIELE 448
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 310/554 (55%), Gaps = 13/554 (2%)
Query: 49 QRLPIVDLSHPILQKLESCS---TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS 105
+ L +V S+ + L +C +V+E IH + G+ +D + +L C +
Sbjct: 267 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYC-KFNG 325
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
+ FD + DA NT++ + + ++ + E M+ +F + + T + +
Sbjct: 326 LIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME-MVNQF-KPDLLTITSILQ 383
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C + L GK VH ++ G+E D N LI+MY+ CG +L +++VF D V+
Sbjct: 384 ACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS 443
Query: 226 WNSMIDGYVKNREVGFARELFDFMP---ERDIFTWNSMISGYVDVGDMEAANGLF-DL-- 279
WNSMI+ Y++N A +LF M + D T+ ++S +GD+ L DL
Sbjct: 444 WNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK 503
Query: 280 MPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
M F ++V N ++D YAK G + + F+ M R++++WN ++A V +D LR+
Sbjct: 504 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 563
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
RM P+ A+++S+L C+ + G+ IH I K ++ DV + L+ MY+K
Sbjct: 564 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 623
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG + + VF M K+VV+W ++I GM+G+G+KA+ F EME G P+ F+ +
Sbjct: 624 CGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAI 683
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
+ AC+H+G+V EG YF M++ YKIEP++EHY C+VDLL R+ L+ +E+ + +P++
Sbjct: 684 IFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKP 743
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
++WGALLSAC ++E+ + V++ ++EL P D G YVL+SN+YA+ GKWD+V ++R+
Sbjct: 744 DSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRK 803
Query: 579 IMKEKELEKAVGSS 592
+K + L+K G S
Sbjct: 804 SIKARGLKKDPGCS 817
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 263/517 (50%), Gaps = 20/517 (3%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L I + L S +T + H++H+ ++ GL +++++ K S +F
Sbjct: 74 LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 133
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFG-ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ + N+I+++ L N F ALS Y E + ++ + YTFP + CAG+
Sbjct: 134 SPSNNVYXWNSIIRA-LTHNGLFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFE 191
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
K +H R++ GF DL++ N+LI MY ++ ARKVFE+ P+ D+V+WNS+I GY
Sbjct: 192 MAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 251
Query: 235 KNREVGFARELF----DFMPERDIFTWNSMISGYVDVGDMEAAN---GLFDLMPF-RDVV 286
N A E++ + D +T +S++ +G +E + GL + + +DV+
Sbjct: 252 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 311
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N ++ Y K + R FD+M +R+ VSWN ++ Y + Y E ++LF M+
Sbjct: 312 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-Q 370
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KP+ ++ S+L AC ++G ++ G+++H Y+ + D S L+ MYAKCG + ++
Sbjct: 371 FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQ 430
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
VF M K+ VSWNSMI Y +G ++A+++F +M K P+ T++ +LS T G
Sbjct: 431 EVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLG 489
Query: 467 -MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
+ L + DL + + V + +VD+ + G M DS ++ + W
Sbjct: 490 DLXLGKELHCDLAKMGFNSNIVVSN--TLVDMYAKCGEMGDSLKVFENMKAR-DIITWNT 546
Query: 526 LLSACSTHSNSELG-KIVAQHLMELEPRDPGPYVLLS 561
++++C + LG +++++ M E P +LS
Sbjct: 547 IIASCVHSEDCNLGLRMISR--MRTEGVTPDMATMLS 581
>gi|255548718|ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545359|gb|EEF46864.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 255/440 (57%), Gaps = 1/440 (0%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
++YTFP+L K I + + G +H + +K GF FV+ +L++MY + DA KVF
Sbjct: 49 DNYTFPILLKAAGRICASKIGFALHGQTIKTGFCAHAFVQTALVNMYGNLHCIGDAFKVF 108
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
E PV DL+ WNSM+D Y N ++ +A LF+ MP +DI ++N MISGY G+ A
Sbjct: 109 EIMPVKDLIAWNSMLDAYASNAQMDYASNLFNSMPLKDISSFNIMISGYSTRGEAMLARS 168
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+FD M RD VSWN MI Y + G++ F M ++N V+WN ++ ++ + +
Sbjct: 169 IFDSMEVRDFVSWNSMISAYIRAGDMEKGLALFREMPVKNTVTWNTMITGCLQSEHFGMV 228
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L LF+ M + P+ ++ SVL+ C ++G + G IH Y + ++T+L+ M
Sbjct: 229 LDLFEEMKTANYIPDYLTVTSVLSTCGHLGSLGTGIKIHIYAIDNGLVSSPHVTTALIDM 288
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y+KCG ++ +VF K++ WN++I +HG G AL++F +M K P+D TF
Sbjct: 289 YSKCGSIEQGLHVFCKSQVKDIYCWNALISALALHGHGYAALKVFGKMRKNHIQPDDITF 348
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
I +++AC+H+G+V EG F MQ + I PK+EHYGCMV+LLGR+G + + +++ +P
Sbjct: 349 IGIINACSHSGLVQEGCQLFVSMQEDFGISPKLEHYGCMVNLLGRSGHLALALQVIETMP 408
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHL-MELEPRDPGPYVLLSNIYASEGKWDEVE 574
E G ++ GALLSAC + + E G+ V + + + G ++ SN+YAS G W+E
Sbjct: 409 FEPGESILGALLSACIIYQDLETGERVIELVCSKAHYLSDGELMMFSNLYASCGNWEEAN 468
Query: 575 NLRRIMKEKELEKAVGSSLV 594
R +M + K G S++
Sbjct: 469 RWREMMNSTGIVKTAGYSVI 488
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 35/240 (14%)
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGY------------ 295
F+P ++ WN +I + +G NG ++ + V D Y
Sbjct: 9 FLPSSEVKKWNEIIRKQMHMG-----NGAQAILTYLKVQELGFHADNYTFPILLKAAGRI 63
Query: 296 --AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
+KIG + C V L+ +Y + ++F+ M D +
Sbjct: 64 CASKIGFALHGQTIKTGFCAHAFVQ-TALVNMYGNLHCIGDAFKVFEIMPVKDL----IA 118
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
S+L A A+ +D + + +K D+ +++ Y+ G LAR++FD+M
Sbjct: 119 WNSMLDAYASNAQMD---YASNLFNSMPLK-DISSFNIMISGYSTRGEAMLARSIFDSME 174
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC---THAGMVLE 470
++ VSWNSMI Y G EK L +F EM P N T+ +++ C H GMVL+
Sbjct: 175 VRDFVSWNSMISAYIRAGDMEKGLALFREM----PVKNTVTWNTMITGCLQSEHFGMVLD 230
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 10/196 (5%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
NT++ L ++ FG + +E+M ++ T + C + SL G K+H +
Sbjct: 213 NTMITGCLQ-SEHFGMVLDLFEEMKTANYIPDYLTVTSVLSTCGHLGSLGTGIKIHIYAI 271
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
G V +LI MYS CG + VF V D+ WN++I + A +
Sbjct: 272 DNGLVSSPHVTTALIDMYSKCGSIEQGLHVFCKSQVKDIYCWNALISALALHGHGYAALK 331
Query: 245 LFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS-----WNCMIDGY 295
+F M + I T+ +I+ G ++ LF M +S + CM++
Sbjct: 332 VFGKMRKNHIQPDDITFIGIINACSHSGLVQEGCQLFVSMQEDFGISPKLEHYGCMVNLL 391
Query: 296 AKIGNVTSARNCFDRM 311
+ G++ A + M
Sbjct: 392 GRSGHLALALQVIETM 407
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 300/569 (52%), Gaps = 23/569 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH LL +GL D F S ++ V ++ FD + D N ++ +
Sbjct: 127 RIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVD-AIKLFDEFPQRDVGCWNAVISCYFKD 185
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
AL ++KM E N TF ++ C + +L GK+VH +++ LD FV
Sbjct: 186 GKAEMALK-TFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFV 244
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
++L+ MY CG + A++VFE P + +TWN+MI GY + EL M +
Sbjct: 245 LSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGT 304
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLF----------DLMPFRDVVSWNCMIDGYAKIGN 300
+ T S+I Y ++ +G F D+ F DV +ID Y K G
Sbjct: 305 KPTLMTLTSII--YASSRSVQLRHGKFIHGYILRNRIDVDIFIDV----SLIDFYFKCGY 358
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
V+SA F + VVSWN++++ +V ++ + L ++D M KP+ + S L+A
Sbjct: 359 VSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSA 418
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
C+ + +D G+ +H I +++ + ++ +LL MYAKCG +D AR +F + ++++VSW
Sbjct: 419 CSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSW 478
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
SMI YG HGQ +AL +F EM+K + TF+ VLSAC+HAG+V EG+ YF+ M
Sbjct: 479 TSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVV 538
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP-MEAGPALWGALLSACSTHSNSELG 539
Y I+P +EHY C++DLLGRAG + ++ E++ + + L L SAC H+N LG
Sbjct: 539 QYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLG 598
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
+ + L+E++P DP Y+LLSN+YAS KWDEV +RR MKE L+K+ G S + +
Sbjct: 599 IQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQR 658
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E+ VY L +G M+
Sbjct: 659 IHPFFAEDKSNPLADGVYECLNILGCHME 687
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 244/490 (49%), Gaps = 17/490 (3%)
Query: 60 ILQKLESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
+L L +C++ K Q IH ++ G Q + S+ L S + + L F
Sbjct: 6 LLSALRTCTSSKLLKQGKLIHQRIFSCGF-QSNIVLSKSLIGFYFSCHDYASAELVFQTN 64
Query: 117 QEP-DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
P D + N ++ ++ AL + + +V + YT+P++ K C G+ +
Sbjct: 65 DCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIY 124
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++H ++K G D+FV +SL++MY+ C + +DA K+F++ P D+ WN++I Y K
Sbjct: 125 GRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFK 184
Query: 236 NREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLF-DLMPFR---DVVS 287
+ + A + FD M E + T+ ++S + ++E + +L+ R D
Sbjct: 185 DGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFV 244
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
+ ++D Y K G + A+ F+++ +N ++WN ++ Y D C+ L RM
Sbjct: 245 LSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGT 304
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP +L S++ A + + G++IH YI + RI D+ + SL+ Y KCG + A
Sbjct: 305 KPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAET 364
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F +++ VVSWN MI G+ M G +AL ++ M++ P+ TF LSAC+
Sbjct: 365 IFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAA 424
Query: 468 VLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ +G ++ ++ +K+E G ++D+ + G + ++ +L +LP + W ++
Sbjct: 425 LDKGRELHYCIIN--HKLEANEIVMGALLDMYAKCGDVDEARKLFHQLP-KRDLVSWTSM 481
Query: 527 LSACSTHSNS 536
+ A +H +
Sbjct: 482 IFAYGSHGQA 491
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 11/288 (3%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
++V +I Y + SA F C +V WN LL+ Y + E L+LFD++
Sbjct: 37 NIVLSKSLIGFYFSCHDYASAELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQL 96
Query: 343 -IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
+P+ + VL AC +G + G+ IH+++ K + DV + +SL+ MYAKC
Sbjct: 97 NCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQ 156
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
A +FD +++V WN++I Y G+ E AL+ F +M++ G PN TF V+S+
Sbjct: 157 FVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSS 216
Query: 462 CTHAGMVLEG-WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
CT + G + +L++R ++ V +VD+ G+ G + ++E+ K+P
Sbjct: 217 CTRLLNLERGKEVHRELIERRILLDAFV--LSALVDMYGKCGCLEMAKEVFEKIP-RKNA 273
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMEL--EPRDPGPYVLLSNIYAS 566
W A+++ S +S + + LM + E P L S IYAS
Sbjct: 274 ITWNAMITGYSLKGDS---RSCIELLMRMNDEGTKPTLMTLTSIIYAS 318
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 292/528 (55%), Gaps = 12/528 (2%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H +L G ++F + ++ S VS++ FD I D ++ S+ N
Sbjct: 68 VHGCVLKVGYGSNTFIGTALIDAYSVS-GCVSMAREVFDEISSKDMVSWTGMIASYAE-N 125
Query: 136 DPFG-ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
D F AL F+ + +A F + N++TF + K C G+++ GK VH ++K +E DL+V
Sbjct: 126 DCFSEALEFFSQMRVAGF-KPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYV 184
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
L+ +Y+ CG+ DA + F D P D++ W+ MI + ++ + A E+F M +
Sbjct: 185 GVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFV 244
Query: 255 ----FTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
FT++S++ D+ ++ + + DV N ++ YAK G + +
Sbjct: 245 IPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSME 304
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
F+ + RN VSWN ++ YV+ D L LF M+R + E + S+L ACA +
Sbjct: 305 LFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAA 364
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+++G +H K DV + +L+ MYAKCG + AR +FD + ++ VSWN++I G
Sbjct: 365 LELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICG 424
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
Y MHG G +A++MF M++ P++ TF+ VLSAC++ G + EG YF M++ Y IEP
Sbjct: 425 YSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEP 484
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+EHY CMV L+GR+G + + + + +P E +W ALL AC H++ ELG+I AQ +
Sbjct: 485 CMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRV 544
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ELEPRD +VLLSNIYA +W V +R+ MK K ++K G S +
Sbjct: 545 LELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWI 592
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%)
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD M RN VS+ L+ Y + + E LF R+ + N +VL +M
Sbjct: 3 FDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWA 62
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
++G+ +H + K + + T+L+ Y+ G + +AR VFD ++ K++VSW MI Y
Sbjct: 63 ELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASY 122
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ +ALE F +M G PN+ TF VL AC
Sbjct: 123 AENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC 157
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 251/432 (58%), Gaps = 11/432 (2%)
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID- 231
LR ++VHA I+ G + LI + G + AR++F P D ++S++
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 163
Query: 232 ----GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF----R 283
G+ + + + R LF P+ + +T+ S+I D+ + + +
Sbjct: 164 TSKFGFSIDTVLFYRRMLFSGAPQSN-YTFTSVIKACADLSALRLGKEIHSHVMVCGYGS 222
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D+ +I YAK ++ A+ FD M R +++WN L++ Y + E + LF M+
Sbjct: 223 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 282
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+P+ A+++S+L++C+ +G +D G W+H Y +V+L TSL+ MY +CG +
Sbjct: 283 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 342
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD+M E+NVV+W +MI GYGMHG G +A+E+F EM GP PN+ TF+ VLSAC
Sbjct: 343 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 402
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK-LPMEAGPAL 522
H+G++ +G F M+ Y + P VEH CMVD+ GRAGL+ D+ + + K +P E GPA+
Sbjct: 403 HSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAV 462
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
W ++L AC H N +LG VA+H++ +EP +PG YV+LSNIYA G+ D VE +R +M
Sbjct: 463 WTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTR 522
Query: 583 KELEKAVGSSLV 594
+ L+K VG S +
Sbjct: 523 RRLKKQVGYSTI 534
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 230/465 (49%), Gaps = 46/465 (9%)
Query: 9 KTTEASLSLDKFIKSQKNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCS 68
KTT +S LD+ K +T +L P + DT + P+ H L L S
Sbjct: 51 KTTTSSAPLDRNPTMNKIKLQTQ-QLAFQHPVTRNFDTQSHS-PV----HEAL--LRSGP 102
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
++ Q+H ++VSGL + ++++ +CT+ S++ + F + PD+F+ ++++
Sbjct: 103 RLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTA-GSITYARRLFPTVPNPDSFLFDSLL 161
Query: 129 KSFLMLNDPFG---ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
K + FG +Y +M+ ++YTF + K CA + +LR GK++H+ ++
Sbjct: 162 K----VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMV 217
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE- 244
CG+ D++V+ +LI +Y+ ++ A+KVF+ P ++ WNS+I GY +N G +E
Sbjct: 218 CGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN---GLPQES 274
Query: 245 --LFDFMPER----DIFTWNSMIS-----GYVDVG----DMEAANGLFDLMPFRDVVSWN 289
LF M E D T S++S G +D G D NG FDL +VV
Sbjct: 275 IGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG-FDL----NVVLGT 329
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
+I+ Y + GNV+ AR FD M RNVV+W +++ Y + + LF M +P
Sbjct: 330 SLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRP 389
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNV 408
N + ++VL+ACA+ G+ID G+ + S +++ + P V + ++ M+ + G+++ A
Sbjct: 390 NNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQF 449
Query: 409 FDNM--TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGP 448
E W SM+ MH G K E + +E P
Sbjct: 450 IKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENP 494
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 251/432 (58%), Gaps = 11/432 (2%)
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID- 231
LR ++VHA I+ G + LI + G + AR++F P D ++S++
Sbjct: 40 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 99
Query: 232 ----GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF----R 283
G+ + + + R LF P+ + +T+ S+I D+ + + +
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSN-YTFTSVIKACADLSALRLGKEIHSHVMVCGYGS 158
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D+ +I YAK ++ A+ FD M R +++WN L++ Y + E + LF M+
Sbjct: 159 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 218
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+P+ A+++S+L++C+ +G +D G W+H Y +V+L TSL+ MY +CG +
Sbjct: 219 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 278
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
AR VFD+M E+NVV+W +MI GYGMHG G +A+E+F EM GP PN+ TF+ VLSAC
Sbjct: 279 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 338
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK-LPMEAGPAL 522
H+G++ +G F M+ Y + P VEH CMVD+ GRAGL+ D+ + + K +P E GPA+
Sbjct: 339 HSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAV 398
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
W ++L AC H N +LG VA+H++ +EP +PG YV+LSNIYA G+ D VE +R +M
Sbjct: 399 WTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTR 458
Query: 583 KELEKAVGSSLV 594
+ L+K VG S +
Sbjct: 459 RRLKKQVGYSTI 470
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 208/410 (50%), Gaps = 38/410 (9%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L S ++ Q+H ++VSGL + ++++ +CT+ S++ + F + PD+F+
Sbjct: 34 LRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTA-GSITYARRLFPTVPNPDSFL 92
Query: 124 CNTIMKSFLMLNDPFG---ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
++++K + FG +Y +M+ ++YTF + K CA + +LR GK++H
Sbjct: 93 FDSLLK----VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIH 148
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ ++ CG+ D++V+ +LI +Y+ ++ A+KVF+ P ++ WNS+I GY +N G
Sbjct: 149 SHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN---G 205
Query: 241 FARE---LFDFMPER----DIFTWNSMIS-----GYVDVG----DMEAANGLFDLMPFRD 284
+E LF M E D T S++S G +D G D NG FDL +
Sbjct: 206 LPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNG-FDL----N 260
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
VV +I+ Y + GNV+ AR FD M RNVV+W +++ Y + + LF M
Sbjct: 261 VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRA 320
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMD 403
+PN + ++VL+ACA+ G+ID G+ + S +++ + P V + ++ M+ + G+++
Sbjct: 321 YGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLN 380
Query: 404 LARNVFDNMT--EKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGP 448
A E W SM+ MH G K E + +E P
Sbjct: 381 DAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENP 430
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 304/542 (56%), Gaps = 13/542 (2%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +CS+V Q H+ + +G+S D +L L S + + FF + +
Sbjct: 379 LSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLD-LYVKCSDIKTAHEFFLSTETEN 437
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N ++ ++ +L++ + + +M + +E N +T+P + + C+ +R++ G+++H
Sbjct: 438 VVLWNVMLVAYGLLDNLNESFKIF-TQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH 496
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+++K GF+ +++V + LI MY+ G++ A K+F D+V+W +MI GY ++ +
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 241 FARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFD---LMPFRDVVS-WNCMI 292
A LF M ++ I + N S IS + + + + + D +S N ++
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALV 616
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YA+ G V A FD++ ++ +SWN L++ + + E L LF +M + + N
Sbjct: 617 SLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSF 676
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ ++A AN+ + +G+ IH+ I K + +S L+T+YAKCG +D A F M
Sbjct: 677 TFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEM 736
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
EKN +SWN+M+ GY HG G KAL +F +M++ G PN TF+ VLSAC+H G+V EG
Sbjct: 737 PEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGI 796
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M+ ++ + PK EHY C+VDLLGR+GL+ + V ++P++ + LLSAC
Sbjct: 797 KYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIV 856
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N ++G+ A HL+ELEP+D YVLLSN+YA GKW + R++MK++ ++K G S
Sbjct: 857 HKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRS 916
Query: 593 LV 594
+
Sbjct: 917 WI 918
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 223/476 (46%), Gaps = 29/476 (6%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
++H ++L G + R++ L + + +V FD + N ++ F+
Sbjct: 89 KLHGKILKMGFCAEVVLCERLMD-LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA- 146
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR-SLREGKKVHARIVKCGFELDLF 193
G + + +M+ + V+ + T+ + + C G +K+HAR + G+E LF
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLF 206
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V N LI +Y G + A+KVF+ D V+W +M+ G ++ A LF M
Sbjct: 207 VCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSG 266
Query: 254 IF----TWNSMISG-----YVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTS 303
++ ++S++S + VG E +GL F + N ++ Y+++GN
Sbjct: 267 VYPTPYIFSSVLSACTKVEFYKVG--EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F+ M R+ VS+N L++ + + L LF +M KP+ ++ S+L+AC++
Sbjct: 325 AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G + +G+ HSY K + D++L +LL +Y KC + A F + +NVV WN M
Sbjct: 385 VGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVM 444
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
++ YG+ ++ ++F +M+ G PN T+ +L C+ V DL ++I+
Sbjct: 445 LVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAV-------DLGEQIHT 497
Query: 484 ------IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+ V ++D+ + G + + ++ +L E W A+++ + H
Sbjct: 498 QVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQH 552
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 204/438 (46%), Gaps = 21/438 (4%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSHP-ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRV 95
NE FT + + ++P IL+ S V QIHTQ+L +G + + +S V
Sbjct: 455 NESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS-V 513
Query: 96 LKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH 155
L + L + ++ F ++E D ++ + AL+ + E M + +
Sbjct: 514 LIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKE-MQDQGIHS 572
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
++ F CAGI++L +G+++HA+ G+ DL V N+L+ +Y+ CG+V DA F
Sbjct: 573 DNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAF 632
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDME 271
+ D ++WNS+I G+ ++ A LF M E + FT+ +S +V +++
Sbjct: 633 DKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVK 692
Query: 272 AANGLFDLM----PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
+ ++ + N +I YAK GN+ A F M +N +SWN +L Y
Sbjct: 693 LGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYS 752
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDV 386
+ + L LF+ M + PN + + VL+AC+++G++D G ++ S + + P
Sbjct: 753 QHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKP 812
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFME 442
++ + + G++ AR + M + + + +++ +H GE A +E
Sbjct: 813 EHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLE 872
Query: 443 MEKRGPTPNDATFICVLS 460
+E P D+ +LS
Sbjct: 873 LE-----PKDSATYVLLS 885
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 231/539 (42%), Gaps = 42/539 (7%)
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMA-KFVEHNHYTFPLLGKV 166
+S+ FF F+ + S+ ND A + +M + V N T+ L
Sbjct: 23 VSIFFF-----FQKFLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDG 77
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C +G K+H +I+K GF ++ + L+ +Y G++ A VF++ PV L W
Sbjct: 78 CLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCW 137
Query: 227 NSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
N ++ +V + G LF M + D T+ ++ G G + + +
Sbjct: 138 NKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRG---CGGGDVPFHCVEKIHA 194
Query: 283 RDVVSW--------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
R + N +ID Y K G + SA+ FD + R+ VSW +L+ + E
Sbjct: 195 RTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEE 254
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
+ LF +M P SVL+AC + +G+ +H + K + + +L+T
Sbjct: 255 AVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVT 314
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
+Y++ G A VF+ M +++ VS+NS+I G G +KALE+F +M P+ T
Sbjct: 315 LYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVT 374
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
+LSAC+ G +L G + + + + G ++DL + ++ + E
Sbjct: 375 VASLLSACSSVGALLVGKQFHSYAIKA-GMSSDIILEGALLDLYVKCSDIKTAHEFFLST 433
Query: 515 PMEAGPALWGALLSACSTHSN-SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
E LW +L A N +E KI Q M++E +P + S +
Sbjct: 434 ETE-NVVLWNVMLVAYGLLDNLNESFKIFTQ--MQMEGIEPNQFTYPSILRT-------C 483
Query: 574 ENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRR 632
+LR + +++ V + + S +++ +Y+ LG++ +K+ RR
Sbjct: 484 SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLID---------MYAKLGKLDHALKIFRR 533
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 307/544 (56%), Gaps = 31/544 (5%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ E ++H +++ SGL D + + ++ + + + + + F + D N+++
Sbjct: 142 LAEGERVHGKVIKSGLDLDIYIGNSLII-MYAKIGCIESAEMVFREMPVRDLVSWNSMIS 200
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
++ + D + +LS + E M A ++ + ++ + C+ LR GK++H ++++ E
Sbjct: 201 GYVSVGDGWRSLSCFRE-MQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLE 259
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFAREL 245
LD+ V+ SL+ MY+ CG + A ++F+ +V WN+MI GY N + + R++
Sbjct: 260 LDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKM 319
Query: 246 FD---FMPERDIFTWNSMISGYVDVGDMEA------------ANGLFDLMPFRDVVSWNC 290
+ P+ W +MI+ +EA NG +P +V
Sbjct: 320 QEGGKLHPD-----WITMINLLPPCAQLEAILLGKSVHGFAIRNGF---LP--HLVLETA 369
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
++D Y + G + A F +M RN++SWN ++A Y + + + + LF + KP+
Sbjct: 370 LVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPD 429
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
++ S+L A A + + + IH Y+ K ++ + +S S++ MY KCG + AR +FD
Sbjct: 430 ATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFD 489
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
MT K+V+SWN++IM Y +HG G ++E+F EM ++G PN +TF+ +L +C+ AG+V E
Sbjct: 490 RMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNE 549
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
GW YF+ M+R Y I P +EHYGC++DL+GR G + ++ + ++P+ +WG+LL+A
Sbjct: 550 GWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTAS 609
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
+ EL +I A+H++ LE + G YVLLSN+YA G+W++VE ++ MK++ LEK+VG
Sbjct: 610 RNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVG 669
Query: 591 SSLV 594
S+V
Sbjct: 670 CSVV 673
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 228/454 (50%), Gaps = 15/454 (3%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+ +++ D F+ N +++ F+ + A+ FY+ +M V +++T+P + K C G+
Sbjct: 82 LFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH-RMEFGGVRGDNFTYPFVIKACGGLY 140
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L EG++VH +++K G +LD+++ NSLI MY+ G + A VF + PV DLV+WNSMI
Sbjct: 141 DLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMIS 200
Query: 232 GYVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF-DLMPFR--- 283
GYV R + RE+ + D F+ ++ G + + +M R
Sbjct: 201 GYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLEL 260
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
DV+ ++D YAK G + A FD++ +++V+WN ++ Y E +M
Sbjct: 261 DVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQ 320
Query: 344 RGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
G P+ +++++L CA + I +G+ +H + + P ++L T+L+ MY +CG +
Sbjct: 321 EGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKL 380
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
A +F M E+N++SWN+MI Y +G+ KA+ +F ++ + P+ T +L A
Sbjct: 381 KPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAY 440
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+ E + ++ K++ +V + G+ G + + E+ ++ + +
Sbjct: 441 AELASLREAEQIHGYVTKL-KLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVIS- 498
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
W ++ A + H G+I + E+ + P
Sbjct: 499 WNTVIMAYAIHG---FGRISIELFSEMREKGFEP 529
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 2/254 (0%)
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
R+ VS + Y + G + +A + F+ M + WN+++ +V + + + + RM
Sbjct: 58 RNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRM 117
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
G + + + V+ AC + + G+ +H + K + D+ + SL+ MYAK G +
Sbjct: 118 EFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCI 177
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ A VF M +++VSWNSMI GY G G ++L F EM+ G + + I +L AC
Sbjct: 178 ESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGAC 237
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+ G + G M R ++E V +VD+ + G M +E L ++ ++ A
Sbjct: 238 SLEGFLRNGKEIHCQMMR-SRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVA- 295
Query: 523 WGALLSACSTHSNS 536
W A++ S ++ S
Sbjct: 296 WNAMIGGYSLNAQS 309
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 300/567 (52%), Gaps = 22/567 (3%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H +V G + F AS ++ C S V+ + FD + + D + NT++ L+ N
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYC-KFSRVAYARKVFDKMPDRDTVLWNTMITG-LVRN 182
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
+ ++ M+A+ V + T + A ++ ++ G + +K GF D +V
Sbjct: 183 CCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVL 242
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
LI ++S C +V AR +F DLV++N++I G+ N E A + F R++
Sbjct: 243 TGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYF-----RELL 297
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG--------------YAKIGNV 301
+S VG + ++ F + + C+ G Y+++ +
Sbjct: 298 VSGQRVSSSTMVGLIPVSSP-FGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEI 356
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FD + V +WN +++ Y + + LF M+ + PN ++ S+L+AC
Sbjct: 357 DLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSAC 416
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
A +G + G+ +H I+ ++ ++ +ST+L+ MYAKCG + A +FD +EKN V+WN
Sbjct: 417 AQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWN 476
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+MI GYG+HG G++AL++F EM G P+ TF+ VL AC+HAG+V EG F M
Sbjct: 477 TMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNK 536
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
Y+IEP EHY CMVD+LGRAG + + E + K+P+E GPA+WG LL AC H ++ L ++
Sbjct: 537 YRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARV 596
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFAS 601
++ L EL+P + G YVLLSNIY+ E + + ++R +K++ L K G +L+
Sbjct: 597 ASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPH 656
Query: 602 ESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ + + +Y+ L E+ +M+
Sbjct: 657 VFVCGDRSHSQTTSIYAKLEELTGKMR 683
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 237/516 (45%), Gaps = 20/516 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L + T + H QL+ +G D +++ +KL ++ LFF + +P
Sbjct: 11 LLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFS-VPKP 69
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D F+ N ++K F D ++SFY + + +++T+ + G +
Sbjct: 70 DIFLFNVLIKGFSFSPDA-SSISFYTHLLKNTTLSPDNFTYAF---AISASPDDNLGMCL 125
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA V GF+ +LFV ++L+ +Y V ARKVF+ P D V WN+MI G V+N
Sbjct: 126 HAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCY 185
Query: 240 GFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDL-----MPFRDVVSWNC 290
+ ++F M + D T +++ ++ +++ G+ L F D V
Sbjct: 186 DDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV-LTG 244
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC-LRLFDRMIRGDAKP 349
+I ++K +V +AR F + ++VS+N L++ + C EC ++ F ++ +
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGF-SCNGETECAVKYFRELLVSGQRV 303
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ ++++ ++ + G + + I + K +ST+L T+Y++ +DLAR +F
Sbjct: 304 SSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLF 363
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D +EK V +WN+MI GY G E A+ +F EM TPN T +LSAC G +
Sbjct: 364 DESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALS 423
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
G L++ +E + ++D+ + G + ++ +L L E W ++
Sbjct: 424 FGKSVHQLIKS-KNLEQNIYVSTALIDMYAKCGNISEASQLFD-LTSEKNTVTWNTMIFG 481
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
H + + ++ L + P LS +YA
Sbjct: 482 YGLHGYGDEALKLFNEMLHLGFQ-PSSVTFLSVLYA 516
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 243/414 (58%), Gaps = 16/414 (3%)
Query: 196 NSLIHMYSVCGEVLDARKVFE--------------DGPVWDLVTWNSMIDGYVKNREVGF 241
N+LI Y G DA+++F+ G ++V+WNSM+ Y+K +V
Sbjct: 234 NTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCS 293
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
AR LF+ MP++D+ +WN+MISGY DM+ + LF MP D VSWN +I G+ + G
Sbjct: 294 ARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEA 353
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDRM R +SWN +++ Y + +Y ++LF +M+ P+ + SVL AC
Sbjct: 354 EHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAAC 413
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSW 420
A++ ++ +G IH ++K + PD +S +L+TMY++CG ++ A +F M T+K++VSW
Sbjct: 414 ASIPMLGLGAQIHQLVEKSFV-PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSW 472
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N++I Y HG+ KAL++F EM + P TF+ +LSAC +AG+V EG FD M
Sbjct: 473 NALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVH 532
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y I ++EHY +V+L+GR G + D+ E+++ +PM ++WGA L AC+ N L +
Sbjct: 533 EYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQ 592
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ L + P PYVL+ N++A EGKW +R M+ + + K G S +
Sbjct: 593 MAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWI 646
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 178/417 (42%), Gaps = 78/417 (18%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---REVGFARELFDFMPER 252
NSL+ + + AR+ F+ PV D V+WN+++ Y + + AR LFD MP+R
Sbjct: 71 NSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQR 130
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+ TWN+++ Y G M+ A LFD MP R+ SWN M+ G+ G V A + FD M
Sbjct: 131 DVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMP 190
Query: 313 MRNVVS------------------------------------WNILLALYVRCKDYCECL 336
++ S +N L+ Y + + +
Sbjct: 191 AKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAK 250
Query: 337 RLFDRMIRGDAKPN-------EASLMS-------------VLTACA---NMGVIDIGQW- 372
RLFD + +G + N E +++S V +A A M D+ W
Sbjct: 251 RLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWN 310
Query: 373 --IHSYIQKCRIK-----------PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
I Y Q +K PD + ++ + + G + AR FD M E+ +S
Sbjct: 311 TMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTIS 370
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI GY +G ++++F +M + G P+ TF VL+AC M+ G L++
Sbjct: 371 WNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVE 430
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
+ + P ++ + R G + D+E + ++ + W AL+ H +
Sbjct: 431 KSFV--PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRA 485
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 191/433 (44%), Gaps = 67/433 (15%)
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G AR++F+ P +VTWNS++ G + + ARE FD MP RD +WN++++ Y
Sbjct: 49 AGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAY 108
Query: 265 V---DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ AA LFD MP RDVV+WN ++ YA+ G + AR FD M RN SWN
Sbjct: 109 SASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNT 168
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG---------------- 365
++ + + L +FD M D+ ASL ++++ G
Sbjct: 169 MVTGFFAAGQVVKALDVFDAMPAKDS----ASLSTMVSGFTKNGMLHEAEELLTKRLSVT 224
Query: 366 ------------------------------VIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+I GQ+ H+ +++ + +V+ S++
Sbjct: 225 DMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMIC 284
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y K G + AR +F+ M +K++VSWN+MI GY +++ ++F EM P P+ ++
Sbjct: 285 YIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEM----PDPDTVSW 340
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
++ G +FD M I + M+ + G S +L SK+
Sbjct: 341 NLIIQGFMQKGEAEHARGFFDRMPERGTIS-----WNTMISGYEKNGNYISSVKLFSKM- 394
Query: 516 MEAGPA----LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+E G + ++L+AC++ LG + Q + + D L +Y+ G +
Sbjct: 395 LEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVPDTAISNALITMYSRCGALN 454
Query: 572 EVENLRRIMKEKE 584
+ E + + M K+
Sbjct: 455 DAEAIFKQMHTKK 467
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 150/354 (42%), Gaps = 55/354 (15%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
N + ++ G AR LFD +P R + TWNS+++G D AA FD MP RD V
Sbjct: 40 NRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAV 99
Query: 287 SWNCMIDGYAKI---GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR-- 341
SWN ++ Y+ ++ +AR FD M R+VV+WN LL Y R E RLFD
Sbjct: 100 SWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMP 159
Query: 342 ---------MIRG--------------DAKP--NEASLMSVLTACANMGVI-DIGQWIHS 375
M+ G DA P + ASL ++++ G++ + + +
Sbjct: 160 QRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTK 219
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD---------NMT-----EKNVVSWN 421
+ + V +L+ Y + G A+ +FD NM E+NVVSWN
Sbjct: 220 RLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWN 279
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
SM++ Y G A +F EM P + ++ ++S T A + E F M
Sbjct: 280 SMMICYIKAGDVCSARALFNEM----PDKDLVSWNTMISGYTQASDMKESEKLFWEMP-- 333
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+P + ++ + G + ++P E G W ++S + N
Sbjct: 334 ---DPDTVSWNLIIQGFMQKGEAEHARGFFDRMP-ERGTISWNTMISGYEKNGN 383
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V+ N + + G +AR FD + R+VV+WN LLA R D FD M
Sbjct: 36 VMRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPV 95
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
DA + +L++ +A + + + + + + DV+ +LL YA+ G+MD
Sbjct: 96 RDAV-SWNTLLAAYSASPHPDHLAAARRLFDEMPQR----DVVTWNTLLGAYARRGLMDE 150
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR +FD M ++N SWN+M+ G+ GQ KAL++F M P + A+ ++S T
Sbjct: 151 ARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAM----PAKDSASLSTMVSGFTK 206
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
GM+ E + ++ V+ Y ++ G+AG D++ L +P
Sbjct: 207 NGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIP 257
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + E NT++ + + ++ + KM+ + +TF + CA I
Sbjct: 359 FFDRMPERGTISWNTMISGYEKNGNYISSVKLF-SKMLEVGEIPDRHTFSSVLAACASIP 417
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED-GPVWDLVTWNSMI 230
L G ++H ++V+ F D + N+LI MYS CG + DA +F+ DLV+WN++I
Sbjct: 418 MLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALI 476
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
Y + A +LF M + T+ S++S V+ G + +FD M +
Sbjct: 477 GCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGI 536
Query: 287 SWNCMIDGYAKIGNVTSARNCFD 309
I+ YA + N+ D
Sbjct: 537 V--ARIEHYAALVNLIGRHGQLD 557
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 308/569 (54%), Gaps = 39/569 (6%)
Query: 55 DLSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
D S +LQ L T K Q H+++L GLSQ+S A++++ S L
Sbjct: 21 DPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYH-SRL 79
Query: 112 FFDGIQEPDAFMCNTIMKSFL---MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
FD +Q + F+ N+++ + + N+ F + +M + V + +T L KV +
Sbjct: 80 VFDSLQHKNVFLWNSLINGYAKNRLYNEAFQ----LFNQMCSSDVLPDDFTLSTLSKVSS 135
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ +L GK +H + ++ GF D V NS++ MY CG ++RKVF++ + + +WN
Sbjct: 136 ELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNV 195
Query: 229 MIDGYVKNREVGFARELFDFMPER-------DIFTWNSMI------SGYVDVG------- 268
+I GY + F E ++F+ + D +T +S++ G D G
Sbjct: 196 LIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYI 255
Query: 269 -DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
E GL DV C+ID Y++ V R FDRM RNV SW ++ YV
Sbjct: 256 VKNELVLGLDS-----DVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYV 310
Query: 328 RCKDYCECLRLF-DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
D E L LF D + +PN SL+SVL AC++ + G+ IH + + + +V
Sbjct: 311 ENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEV 370
Query: 387 LLSTSLLTMYAKCGVMDLARNVF-DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
L +L+ MY+KCG +D AR VF D+ K+ +SW+SMI GYG+HG+G++A+ ++ +M +
Sbjct: 371 SLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQ 430
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G P+ T + +LSAC+ +G+V EG + + Y IEP +E + C+VD+LGRAG +
Sbjct: 431 AGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLD 490
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+ + + +P+E GP++WGAL+S H + E+ ++ + L++LEP +P YV +SN+YA
Sbjct: 491 PALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYA 550
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLV 594
S +WD V +RR+MK+K L K G S +
Sbjct: 551 SSRRWDAVAEVRRMMKDKRLRKVPGCSWI 579
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 298/545 (54%), Gaps = 19/545 (3%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C++V + Q+H+ ++ G+S D +L L + + +F + +
Sbjct: 321 LSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD-LYVKCFDIETAHEYFLTTETEN 379
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH---NHYTFPLLGKVCAGIRSLREGK 177
+ N ++ ++ L G LS Y + +E N YT+P + + C + +L G+
Sbjct: 380 VVLWNVMLVAYGQL----GNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H +++K GF+ +++V + LI MY+ GE+ AR + + D+V+W +MI GY ++
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495
Query: 238 EVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPF----RDVVSWN 289
A +LF M + I ++S IS + + + D+ N
Sbjct: 496 LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGN 555
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++ YA+ G A F+++ ++ +SWN L++ + + E L++F +M + +
Sbjct: 556 ALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEA 615
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
N + S ++A AN I G+ IH+ + K + S L+T+Y+KCG ++ A+ F
Sbjct: 616 NLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREF 675
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
M EKNVVSWN+MI GY HG G +A+ +F EM++ G PN TF+ VLSAC+H G+V
Sbjct: 676 FEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVN 735
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG YF M + + + PK EHY C+VDLLGRA L+ + E + ++P+E +W LLSA
Sbjct: 736 EGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSA 795
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C+ H N E+G+ A+HL+ELEP D YVLLSN+YA GKWD + R++MK++ ++K
Sbjct: 796 CTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEP 855
Query: 590 GSSLV 594
G S +
Sbjct: 856 GRSWI 860
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 225/475 (47%), Gaps = 27/475 (5%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
++H ++ SG + SR++ + + V ++ FD I + N ++ L
Sbjct: 31 KLHARIFKSGFDGEDVLGSRLID-IYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAK 89
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS-LREGKKVHARIVKCGFELDLF 193
L + M+ + V + TF + + C+G ++ + +++HA+I+ GF
Sbjct: 90 KLASQVLGLF-SLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPL 148
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V N LI +YS G V A+ VFE + D V+W +MI G +N A LF M +
Sbjct: 149 VCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSA 208
Query: 254 I----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW---------NCMIDGYAKIGN 300
+ + ++S++S + + L +V W N ++ Y++ GN
Sbjct: 209 VIPTPYVFSSVLSACTKIELFKLGEQLHGF-----IVKWGLSSETFVCNALVTLYSRWGN 263
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ +A F +M R+ +S+N L++ + L+LF++M KP+ ++ S+L+A
Sbjct: 264 LIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSA 323
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
CA++G G+ +HSY+ K + D+++ SLL +Y KC ++ A F +NVV W
Sbjct: 324 CASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLW 383
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N M++ YG G ++ +F++M+ G PN T+ +L CT G + G + +
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE---QIHTQ 440
Query: 481 IYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+ K + Y C ++D+ + G + + ++ +L E W A+++ + H
Sbjct: 441 VIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 223/490 (45%), Gaps = 61/490 (12%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M + + N T+ L + C SL + KK+HARI K GF+ + + + LI +Y GE
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
V +A K+F+D P ++ WN +I G + + LF M ++ S +
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASV--- 117
Query: 268 GDMEAANGLFDLMPFRDV----------------VSWNCMIDGYAKIGNVTSARNCFDRM 311
+ A +G PF+ + N +ID Y+K G+V A+ F+R+
Sbjct: 118 --LRACSG--GKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL 173
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
+++ VSW +++ + E + LF +M + P SVL+AC + + +G+
Sbjct: 174 FLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGE 233
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+H +I K + + + +L+T+Y++ G + A +F M ++ +S+NS+I G G
Sbjct: 234 QLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRG 293
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG--------------------MVLEG 471
++AL++F +M+ P+ T +LSAC G +++EG
Sbjct: 294 FSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEG 353
Query: 472 WWYFDLMQRIYKIEPKVEHY-----------GCMVDLLGRAGLMRDSEELVSKLPMEA-- 518
DL + + IE E++ M+ G+ G + +S + ++ +E
Sbjct: 354 -SLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412
Query: 519 -GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV--LLSNIYASEGKWDEVEN 575
+ ++L C++ +LG+ + +++ YV +L ++YA G+ D
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIK-SGFQFNVYVCSVLIDMYAKHGELDTARG 471
Query: 576 LRRIMKEKEL 585
+ + ++E+++
Sbjct: 472 ILQRLREEDV 481
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 195/414 (47%), Gaps = 20/414 (4%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL+ S + QIHTQ++ SG + + S VL + + + ++E
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS-VLIDMYAKHGELDTARGILQRLREE 479
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D ++ + +D F +++M + + ++ F CAGI++L +G+++
Sbjct: 480 DVVSWTAMIAGYTQ-HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI 538
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA+ G+ DL + N+L+ +Y+ CG DA FE D ++WN++I G+ ++
Sbjct: 539 HAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHC 598
Query: 240 GFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPF----RDVVSWNCM 291
A ++F M E ++FT+ S +S + +++ + +M + + N +
Sbjct: 599 EEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVL 658
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I Y+K G++ A+ F M +NVVSWN ++ Y + E + LF+ M + PN
Sbjct: 659 ITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNH 718
Query: 352 ASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + VL+AC+++G+++ G + S ++ + P ++ + + ++ AR +
Sbjct: 719 VTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIE 778
Query: 411 NM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
M E + + W +++ +H GE A +E+E P D+ +LS
Sbjct: 779 EMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELE-----PEDSATYVLLS 827
>gi|449459744|ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
gi|449529850|ref|XP_004171911.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
Length = 580
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 313/573 (54%), Gaps = 41/573 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK---LCTSLSSVSLSVLFFDGIQEPD 120
L S VK+ QIH Q+LV+GL R + + C + S L + + PD
Sbjct: 10 LNSSVHVKQATQIHAQILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRILHHS-RNPD 68
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
AF ++ F N F +Y +M + + + + C I G +H
Sbjct: 69 AFTWACAVR-FFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFRGWCIH 127
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A++ K GF ++V+ +L+ YS G++ A+KVF++ ++V+WNS++ GYVK +
Sbjct: 128 AQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSILSGYVKIGNLV 187
Query: 241 FARELFDFMPERDIFTWNSM-------------------------------ISGYVDVGD 269
A++LFD MP +D +WNSM I GYV+ GD
Sbjct: 188 DAQKLFDEMPVKDAISWNSMLTGFSNSGNMDRACCLFQQMGEKSSASWNAMIGGYVNCGD 247
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM--CMRNVVSWNILLALYV 327
M+AA LFD+MP R+ V+ +I GY+K+G V SA FD+M + ++S+N ++A Y
Sbjct: 248 MKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSFNAMIACYS 307
Query: 328 RCKDYCECLRLFDRMIRG--DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ + L LF+ M++ + +P+E + SV++AC +G + G WI SY++K I+ D
Sbjct: 308 QNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTWIESYMEKLGIELD 367
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
L+T+L+ +YAK G ++ A +F+ + ++++V++++MI G G++ + +A+ +F EM +
Sbjct: 368 DHLATALVDLYAKSGNINRAFELFNGLKKRDLVAYSAMIFGCGINSKAHEAIRLFKEMLR 427
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
PN T+ +L+A HAG+V EG+ F M+ + + P +HYG MVDLLGRAG +
Sbjct: 428 VNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKD-HGLAPLADHYGIMVDLLGRAGRLE 486
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ EL+ +P++ +WGALL AC H+N ELG+I A++ +L G LL+NIY+
Sbjct: 487 EAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYS 546
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
S +WD+ + +R+ M K K G S + E
Sbjct: 547 SMERWDDAKRMRKAMGNKIFAKISGCSWMEQSE 579
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 262/444 (59%), Gaps = 9/444 (2%)
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
AG L++ +++ R+ + D N++I Y+ G + AR++F++ P D V+W
Sbjct: 203 AGYGYLKDAEELFGRMQRP----DRVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWT 258
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
+++ GY++N +V A E+F MP+RD+ WN+M+ G+V ++ A LF MP RD+VS
Sbjct: 259 AIVRGYLQNGDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLVS 318
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
WN ++ GY + G++ SA F M ++ SWN +++ Y KD L L M RG
Sbjct: 319 WNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGY---KDEG-ALSLLSEMTRGGY 374
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P++A+ V++ CA++ + G+ +H K + D L+ +SL++MY+KCG++ A
Sbjct: 375 RPDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQ 434
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VFD + +++ V+WN+MI Y HG +AL +F M K +P+ ATF+ VLSAC H G
Sbjct: 435 VFDLIVQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGY 494
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ EG YF MQ+ + + P+ +HY CMVDLLGR+G + + K+P W L
Sbjct: 495 LYEGCHYFRSMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWETLF 554
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
S+C+ H + +LG++VA+++++ P D G Y LLSNIYA++G W +R +MKE+ L+K
Sbjct: 555 SSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSSAATVRGLMKEQGLKK 614
Query: 588 AVGSSLVH-PGEFASESIVENCPP 610
G S + G+ S S +N P
Sbjct: 615 ETGCSWIELKGDVVSFSSNDNAHP 638
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 141/251 (56%), Gaps = 7/251 (2%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
NS I + G V AR+VF++ ++ TWN M+ G +N + AR +FD MP R+
Sbjct: 40 NSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSV 99
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W ++++GY G + A LFD MP R+VVSWN M+ GY + G V AR FD M R+
Sbjct: 100 SWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARD 159
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VSW ++++ Y+R K + E +FD R + P + ++L+ A G + + +
Sbjct: 160 DVSWLMMVSGYMRRKRFREAREIFD---RAPSPPPTSVCNALLSGYAGYGYLKDAEELFG 216
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+Q +PD + +++T Y + G+M +AR +FD M K+ VSW +++ GY +G +
Sbjct: 217 RMQ----RPDRVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDA 272
Query: 436 ALEMFMEMEKR 446
A E+F +M R
Sbjct: 273 AWEVFQDMPDR 283
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 176/404 (43%), Gaps = 69/404 (17%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++F N ++ + G + DAR VF+ P + V+W +++ GY + V AR+LFD
Sbjct: 64 ERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSVSWAALLTGYARRGRVAEARDLFDR 123
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW-------------------- 288
MP R++ +WN+M+SGY+ G ++ A LFD MP RD VSW
Sbjct: 124 MPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYMRRKRFREAREIF 183
Query: 289 ------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
N ++ GYA G + A F RM + VSWN ++ Y R
Sbjct: 184 DRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVAR 243
Query: 337 RLFDRM-----------IRGDAKPNEASLM----------SVLTACANMGVIDIGQWIHS 375
RLFD M +RG + + VL MG + +
Sbjct: 244 RLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDD 303
Query: 376 YIQKCRIKPDVLLST--SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
++ PD L + ++L Y + G MD A F +M EK+ SWN++I GY +
Sbjct: 304 ALRLFADMPDRDLVSWNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGY----KD 359
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH--- 490
E AL + EM + G P+ AT+ V+S C + G M I I+ EH
Sbjct: 360 EGALSLLSEMTRGGYRPDQATWSVVISVCASLAALGCG-----RMVHICTIKTGFEHDAL 414
Query: 491 -YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
++ + + GL+ ++ + V L ++ W A+++ + H
Sbjct: 415 VMSSLISMYSKCGLITEASQ-VFDLIVQRDTVTWNAMIATYAYH 457
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+ +F + E D NT++ + GALS E + + T+ ++ VCA
Sbjct: 335 ATTWFRSMLEKDETSWNTVISGY----KDEGALSLLSEMTRGGY-RPDQATWSVVISVCA 389
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ +L G+ VH +K GFE D V +SLI MYS CG + +A +VF+ D VTWN+
Sbjct: 390 SLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNA 449
Query: 229 MIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLF------- 277
MI Y + A LFD M + D T+ S++S G + F
Sbjct: 450 MIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEGCHYFRSMQQDW 509
Query: 278 DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN--VVSWNILLA 324
+L+P D ++CM+D + G V A N F R N + +W L +
Sbjct: 510 NLVPRSD--HYSCMVDLLGRSGFVHQAYN-FTRKIPSNLQINAWETLFS 555
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 234/398 (58%)
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
++I+ Y G++ +AR+V+ P D+ +++ G ++N + A ++F + D+
Sbjct: 302 TIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVC 361
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WNSMI+GY G M+ A LF MP ++ VSWN MI GYA+ G + A F M +N+
Sbjct: 362 WNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNI 421
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSWN L+A +++ Y + L+ M + KP++++ L+ACAN+ + +G +H Y
Sbjct: 422 VSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEY 481
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I K D+ + +L+ MYAKCG + A VF ++ +++SWNS+I GY ++G KA
Sbjct: 482 ILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKA 541
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+ F +M P++ TFI +LSAC+HAG+ +G F M + IEP EHY C+VD
Sbjct: 542 FKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVD 601
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LLGR G + ++ V + ++A LWG+LL AC H N ELG+ A+ L ELEP +
Sbjct: 602 LLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASN 661
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
Y+ LSN++A G+W+EVE +R +M+ K K G S +
Sbjct: 662 YITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWI 699
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 233/525 (44%), Gaps = 108/525 (20%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
+LD N++I Y+ G+ DA+KVFE P DLV++NSM+ GY +N ++ A + F+
Sbjct: 139 KLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFES 198
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
M ER++ +WN M++GYV GD+ +A LF+ +P + VSW M+ G AK G + AR F
Sbjct: 199 MTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELF 258
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
DRM +NVVSWN ++A YV+ E ++LF +M D+ S +++ +G +D
Sbjct: 259 DRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDS----VSWTTIINGYIRVGKLD 314
Query: 369 IGQWIHS----------------YIQKCRIKP-----------DVLLSTSLLTMYAKCGV 401
+ +++ IQ RI DV+ S++ Y++ G
Sbjct: 315 EARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGR 374
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME----------------- 444
MD A N+F M KN VSWN+MI GY GQ ++A E+F M
Sbjct: 375 MDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQN 434
Query: 445 --------------KRGPTPNDATFICVLSACTHAGMVLEGWWYFD------LMQRIYKI 484
K G P+ +TF C LSAC + + G + M ++
Sbjct: 435 NLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVG 494
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSE--ELVSKLPMEAGPALWG------------------ 524
+ Y + + RD E +L+S + +G AL G
Sbjct: 495 NALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVV 554
Query: 525 -------ALLSACSTHSNSELGKIVAQHLME---LEPRDPGPYVLLSNIYASEGKWDEVE 574
+LSACS + G + + ++E +EP Y L ++ G+ +E
Sbjct: 555 PDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAE-HYSCLVDLLGRVGRLEEAF 613
Query: 575 NLRRIMKEKELEKAVGSSL----VHP----GEFASESIVENCPPH 611
N R MK K GS L VH G FA+E + E PH
Sbjct: 614 NTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFE-LEPH 657
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 147/315 (46%), Gaps = 56/315 (17%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K+ GIRS+ E K HA F N I G+V +A ++F + +LV
Sbjct: 2 KLKLGIRSIGEAGK-HA-----------FNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLV 49
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
T+NSMI KN + AR+LFD M R++ +WN+MI+GY+ +E A+ LFD+MP RD
Sbjct: 50 TYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERD 109
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLALYVRCKDYCECLRLFDRMI 343
SW MI Y + G + AR + + + + WN ++A Y + + + ++F++M
Sbjct: 110 NFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQM- 168
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
P D++ S+L Y + G M
Sbjct: 169 -----P---------------------------------AKDLVSYNSMLAGYTQNGKMH 190
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
LA F++MTE+NVVSWN M+ GY G A ++F ++ P PN +++ +L
Sbjct: 191 LALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKI----PNPNAVSWVTMLCGLA 246
Query: 464 HAGMVLEGWWYFDLM 478
G + E FD M
Sbjct: 247 KYGKMAEARELFDRM 261
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-NHYTFPLLGKVCAGI 170
F ++E + N+++ FL N AL MM K + + TF CA +
Sbjct: 412 IFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLV--MMGKEGKKPDQSTFACTLSACANL 469
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+L+ G ++H I+K G+ DLFV N+LI MY+ CG V A +VF D DL++WNS+I
Sbjct: 470 AALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLI 529
Query: 231 DGYVKNREVGFARELFDFM-PER---DIFTWNSMISGYVDVGDMEAANGLFDLM------ 280
GY N A + F+ M ER D T+ M+S G +F M
Sbjct: 530 SGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAI 589
Query: 281 -PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
P + ++C++D ++G + A N M ++ N W LL
Sbjct: 590 EPLAE--HYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLG 633
>gi|222635245|gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japonica Group]
Length = 769
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 243/414 (58%), Gaps = 16/414 (3%)
Query: 196 NSLIHMYSVCGEVLDARKVFE--------------DGPVWDLVTWNSMIDGYVKNREVGF 241
N+LI Y G DA+++F+ G ++V+WNSM+ Y+K +V
Sbjct: 46 NTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCS 105
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
AR LF+ MP++D+ +WN+MISGY DM+ + LF MP D VSWN +I G+ + G
Sbjct: 106 ARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEA 165
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDRM R +SWN +++ Y + +Y ++LF +M+ P+ + SVL AC
Sbjct: 166 EHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAAC 225
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSW 420
A++ ++ +G IH ++K + PD +S +L+TMY++CG ++ A +F M T+K++VSW
Sbjct: 226 ASIPMLGLGAQIHQLVEKSFV-PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSW 284
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N++I Y HG+ KAL++F EM + P TF+ +LSAC +AG+V EG FD M
Sbjct: 285 NALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVH 344
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y I ++EHY +V+L+GR G + D+ E+++ +PM ++WGA L AC+ N L +
Sbjct: 345 EYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQ 404
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ L + P PYVL+ N++A EGKW +R M+ + + K G S +
Sbjct: 405 MAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWI 458
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + E NT++ + + ++ + KM+ + +TF + CA I
Sbjct: 171 FFDRMPERGTISWNTMISGYEKNGNYISSVKLF-SKMLEVGEIPDRHTFSSVLAACASIP 229
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED-GPVWDLVTWNSMI 230
L G ++H ++V+ F D + N+LI MYS CG + DA +F+ DLV+WN++I
Sbjct: 230 MLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALI 288
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
Y + A +LF M + T+ S++S V+ G + +FD M +
Sbjct: 289 GCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGI 348
Query: 287 SWNCMIDGYAKIGNVTSARNCFD 309
I+ YA + N+ D
Sbjct: 349 V--ARIEHYAALVNLIGRHGQLD 369
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 259/429 (60%), Gaps = 12/429 (2%)
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
E K H I++ + LD V+N+L+ MY G + A K F + WN M+ GY
Sbjct: 686 EAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYG 745
Query: 235 K----NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF-----DLMPFRDV 285
K + +G RE+ E D + S++S +G A + +LM +V
Sbjct: 746 KIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMD-ENV 804
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
N +ID Y K GN+T AR F R+ R++V+WN L++ Y C + E L L+D+M+
Sbjct: 805 SVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLE 863
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
D KPN A+L+ VL+AC+++ ++ G+ +H+YI + + ++ ++T+L+ MYAKCG ++ +
Sbjct: 864 DLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKS 923
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
R +F++M E++V++WN MI GYGMHG A+E F +ME+ PN TF+ VLSAC HA
Sbjct: 924 REIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHA 983
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V EG + F MQ Y + P ++HY CMVDLLGR+G ++++E LV +P+ +WGA
Sbjct: 984 GLVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGA 1042
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
LLS+C H+ E+G +A+H + + + G YV++SN+Y+S GKW+E E R IMKE+ +
Sbjct: 1043 LLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGV 1102
Query: 586 EKAVGSSLV 594
K G S V
Sbjct: 1103 RKKTGWSAV 1111
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 194/402 (48%), Gaps = 17/402 (4%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ C + +L EG+ +H +VK G + V++SL+ MYS CG +A + F + D++
Sbjct: 575 QACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDII 634
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANGLF 277
+W SMI Y + +G+A E D E D + M+S + + + A
Sbjct: 635 SWTSMISAYSR---MGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFH 691
Query: 278 DLMPFR----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
L+ R D + N ++ Y K G + A F R+ +N +WN++++ Y +
Sbjct: 692 GLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIM 751
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+C+ LF M + + SL+SV+++C+ +G + + IH Y+ K + +V ++ SL+
Sbjct: 752 KCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLI 811
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY K G + +AR +F + +++V+WN++I Y G +AL ++ +M PN A
Sbjct: 812 DMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSA 870
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
T + VLSAC+H + EG + + K E + ++D+ + G + S E+ +
Sbjct: 871 TLVXVLSACSHLASLEEGEKVHNYING-GKFEFNLSIATALIDMYAKCGQLEKSREIFNS 929
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
+ E W ++S H ++ Q + E + G
Sbjct: 930 MH-ERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNG 970
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 155/362 (42%), Gaps = 57/362 (15%)
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER--DIFTWN-------SMIS 262
R + W+L+TW GY+K +++ ++ D+ + + WN +
Sbjct: 395 RGITPSYTTWELLTW-----GYLKKKQM---EKVLDYFEKAVGSVKKWNPDEKLVREVYK 446
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVS---WNCMIDGYAKIGNV------------------ 301
+ G++E A + ++ VS +N ++ YAK G +
Sbjct: 447 NLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEE 506
Query: 302 -------TSARNCFDRM------CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
TS R+ C+RNV W + K ECL R+ +
Sbjct: 507 THRLIKETSKMCXVQRLDPLLCICIRNVEFWR--RHMNGESKMGLECLCEMHRIGGDGER 564
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN +L AC N+G + G+ +H + K + ++ +SLL+MY+KCG + A
Sbjct: 565 PNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRS 624
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F + K+++SW SMI Y G + ++MF EM G P+ C+LS+ +++ V
Sbjct: 625 FCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRV 684
Query: 469 LEGWWYFDL-MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
E + L ++R Y ++ V++ ++ + + G ++ +E+ ++ E W ++
Sbjct: 685 FEAKAFHGLIIRRHYTLDQMVQN--ALLSMYCKFGFLKLAEKFFGRVN-EQNFEAWNLMV 741
Query: 528 SA 529
S
Sbjct: 742 SG 743
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D NT++ S+ ALS Y +KM+ + ++ N T + C+ + SL EG+KV
Sbjct: 833 DIVTWNTLISSYAHCGHFAEALSLY-DKMVLEDLKPNSATLVXVLSACSHLASLEEGEKV 891
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H I FE +L + +LI MY+ CG++ +R++F D++TWN MI GY + +
Sbjct: 892 HNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDA 951
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVV----SWNCM 291
A E F M E T+ +++S G ++ LF M V + CM
Sbjct: 952 RSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACM 1011
Query: 292 IDGYAKIGNVTSA 304
+D + GN+ A
Sbjct: 1012 VDLLGRSGNLQEA 1024
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
++ + P+ + LT CA+ ++ + + I+K +I PD + +SL +Y K G++
Sbjct: 218 LKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLL 277
Query: 403 DLARNVFDNM----TEKNVVSWNSMIMGY-------GMHGQGEKALEMFMEMEKRGPTPN 451
D A + M + K ++++S+I + G+H +K +F +M N
Sbjct: 278 DKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKM-------N 330
Query: 452 DATFICVLSACTHAG 466
DA + C++S+ G
Sbjct: 331 DAEYTCMISSLVKLG 345
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 126/310 (40%), Gaps = 24/310 (7%)
Query: 170 IRSLREGKKVHARIVKCGF-----ELDLFVRNSLIHMYSVCG--EVLDARKVFED--GPV 220
+R LR+ K+ + C + ++ L + +H+ + + A K FED +
Sbjct: 95 VRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKM 154
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT----WNSMISGYVDVGDMEAANGL 276
T +++ YV+N+ A L + M E +N MIS Y+ G +E G+
Sbjct: 155 KGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGM 214
Query: 277 FDLMPFR---DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV----VSWNILLALYVRC 329
+ DVV++N + A +V +A + + V+++ L LY++
Sbjct: 215 IQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKK 274
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
+ + M + ++ + S+++ NM D I ++ K +
Sbjct: 275 GLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEY 334
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVS----WNSMIMGYGMHGQGEKALEMFMEMEK 445
T +++ K G + A N++ T + N ++ Y + E A + + +M +
Sbjct: 335 TCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVE 394
Query: 446 RGPTPNDATF 455
RG TP+ T+
Sbjct: 395 RGITPSYTTW 404
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 261/430 (60%), Gaps = 16/430 (3%)
Query: 178 KVHARIVKCG-FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
++H ++ G F D + ++L+HMY C +DAR+ F++ P + V +M GYV+N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYV---------DVGDMEAANGLFDLMPF-RDVV 286
V + ELF M D + + V D G + + L + F R+
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233
Query: 287 SWNCMIDGYAKIG--NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
N M+D YAK G ++ AR FD M R+VVSWN ++ALY + E + L+ +M+
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292
Query: 345 --GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
G K N +L +VL ACA+ G I G+ IH+ + + ++ +V + TS++ MY+KCG +
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 352
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
++A F + EKN++SW++MI GYGMHG+G++ALE+F EM++ G PN TFI VL+AC
Sbjct: 353 EMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAAC 412
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+HAG++ EG ++++ M++ + IE VEHYGCMVDLLGRAG + ++ L+ ++ ++ A+
Sbjct: 413 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 472
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
WGALLSAC H N EL ++ + L EL+ + G YVLLSNIYA W +VE +R ++K
Sbjct: 473 WGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKT 532
Query: 583 KELEKAVGSS 592
+ +EK G S
Sbjct: 533 RRIEKPPGYS 542
>gi|297837203|ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
gi|297332324|gb|EFH62742.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
Length = 1243
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 248/432 (57%), Gaps = 18/432 (4%)
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW----------------DLVTWNSMI 230
G E ++ N+LI Y G+V AR +F+ P ++V+WNSMI
Sbjct: 574 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMI 633
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
Y+K +V AR LFD M +RD +WN+MI GYV V M+ A LF MP RD SWN
Sbjct: 634 KAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHSWNM 693
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
M+ GYA +GN+ AR+ F++ +N+VSWN ++A Y + KDY E + +F RM KP+
Sbjct: 694 MVSGYASVGNLELARHYFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPD 753
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+L S+L+ + + +G +H + K I PDV + +L+TMY++CG + +R +FD
Sbjct: 754 PHTLTSLLSVSTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFD 812
Query: 411 NMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
M ++ V++WN++I GY HG +AL +F M+ G P+ TF+ VL+AC HAG+V
Sbjct: 813 EMKLKREVITWNAIIGGYAFHGNASEALNLFWSMKCYGIHPSHITFVSVLNACAHAGLVD 872
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
E F M +YKIEP++EHY +V+++ G ++ ++ +P E +WGALL A
Sbjct: 873 EAKEQFLSMMSVYKIEPQMEHYSSLVNVISGQGQFEEAMYVIKSMPFEPDKTVWGALLDA 932
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C ++N L + A+ + LEP PYVLL N+YA G WDE +R M+ K ++K
Sbjct: 933 CRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKER 992
Query: 590 GSSLVHPGEFAS 601
GSS V F +
Sbjct: 993 GSSWVDSSTFKT 1004
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 204/441 (46%), Gaps = 57/441 (12%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G + +AR++FE ++VTWN+MI GYVK RE+ AR+LFD MPERD+ TWN+MISGYV
Sbjct: 398 GYIAEAREIFEKLEARNIVTWNTMISGYVKRREMTQARKLFDEMPERDVVTWNAMISGYV 457
Query: 266 DVGD---MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
G +E A LFD MP RD SWN MI GYAK ++ A F++M RN VSW+ +
Sbjct: 458 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRISEALLLFEKMPERNAVSWSAM 517
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCR 381
+ + + LF RM D+ +SL +++ ++ W+ Y
Sbjct: 518 ITGFCHNGEVNRAFDLFRRMPVKDS----SSLCALVAGLIKNERLEEAAWVLGQYGSLDS 573
Query: 382 IKPDVLLS-TSLLTMYAKCGVMDLARNVFDNMTE----------------KNVVSWNSMI 424
+ D++ + +L+ Y + G ++ AR +FD + + +NVVSWNSMI
Sbjct: 574 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMI 633
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
Y G A +F +M+ R + ++ ++ H + + + F M
Sbjct: 634 KAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMDDAFALFSEMP----- 684
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
+ MV G + + K P E W ++++A N + + V
Sbjct: 685 NRDAHSWNMMVSGYASVGNLELARHYFEKTP-EKNIVSWNSIIAA--YDKNKDYKEAVDV 741
Query: 545 HL-MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
+ M ++ P P+ L S + S G + NLR M+ ++ ++
Sbjct: 742 FIRMNIDGEKPDPHTLTSLLSVSTG----LVNLRLGMQMHQI--------------VVKT 783
Query: 604 IVENCPPHRKCI-VYSMLGEI 623
++ + P H I +YS GEI
Sbjct: 784 VIPDVPVHNALITMYSRCGEI 804
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 181/424 (42%), Gaps = 100/424 (23%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C GIR L E +K+ + D F N++I Y+ + +A +FE P + V+W
Sbjct: 459 CGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRISEALLLFEKMPERNAVSW 514
Query: 227 NSMIDGYVKNREVGFARELFDFMPERD--------------------------------- 253
++MI G+ N EV A +LF MP +D
Sbjct: 515 SAMITGFCHNGEVNRAFDLFRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSG 574
Query: 254 ----IFTWNSMISGYVDVGDMEAANGLFDLMP----------------FRDVVSWNCMID 293
++ +N++I GY G +EAA LFD +P R+VVSWN MI
Sbjct: 575 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIK 634
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
Y K+G+V SAR FD+M R+ +SWN ++ YV + LF M DA
Sbjct: 635 AYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDA------ 688
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
HS+ +++ YA G ++LAR+ F+
Sbjct: 689 --------------------HSW-------------NMMVSGYASVGNLELARHYFEKTP 715
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
EKN+VSWNS+I Y + ++A+++F+ M G P+ T +LS T + G
Sbjct: 716 EKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPDPHTLTSLLSVSTGLVNLRLG-- 773
Query: 474 YFDLMQRIYK-IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+ Q + K + P V + ++ + R G + +S + ++ ++ W A++ +
Sbjct: 774 -MQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAIIGGYAF 832
Query: 533 HSNS 536
H N+
Sbjct: 833 HGNA 836
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 202/444 (45%), Gaps = 45/444 (10%)
Query: 173 LREGKKVHARIVKCGFEL-DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+R G AR + E ++ N++I Y E+ ARK+F++ P D+VTWN+MI
Sbjct: 395 IRSGYIAEAREIFEKLEARNIVTWNTMISGYVKRREMTQARKLFDEMPERDVVTWNAMIS 454
Query: 232 GYVKNREVGF---ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
GYV + F AR+LFD MP RD F+WN+MISGY + A LF+ MP R+ VSW
Sbjct: 455 GYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRISEALLLFEKMPERNAVSW 514
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+ MI G+ G V A + F RM +++ S L+A ++ + E + + D+
Sbjct: 515 SAMITGFCHNGEVNRAFDLFRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSG 574
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKC--------------------RIKPDVLL 388
+ L N ++ GQ +C R + +V+
Sbjct: 575 RED------LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVS 628
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
S++ Y K G + AR +FD M +++ +SWN+MI GY + + A +F EM P
Sbjct: 629 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEM----P 684
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
+ ++ ++S G + YF+ E + + ++ + +++
Sbjct: 685 NRDAHSWNMMVSGYASVGNLELARHYFEKTP-----EKNIVSWNSIIAAYDKNKDYKEAV 739
Query: 509 ELVSKLPMEA---GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ ++ ++ P +LLS + N LG + Q +++ D + L +Y+
Sbjct: 740 DVFIRMNIDGEKPDPHTLTSLLSVSTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYS 799
Query: 566 SEGKWDEVENLRRIMKEKELEKAV 589
G E+ RRI E +L++ V
Sbjct: 800 RCG---EIMESRRIFDEMKLKREV 820
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
L + G + AR +F+ + +N+V+WN+MI GY + +A ++F EM +R +
Sbjct: 391 LNQMIRSGYIAEAREIFEKLEARNIVTWNTMISGYVKRREMTQARKLFDEMPER----DV 446
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV- 511
T+ ++S G G + + ++++ P + + + G A R SE L+
Sbjct: 447 VTWNAMISGYVSCG----GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRISEALLL 502
Query: 512 -SKLPMEAGPALWGALLSA 529
K+P E W A+++
Sbjct: 503 FEKMP-ERNAVSWSAMITG 520
>gi|413925246|gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]
Length = 572
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 276/527 (52%), Gaps = 42/527 (7%)
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY-YEKMMAKFVEHNHYTFPLL 163
+ ++S L+F F+ N ++++ P LSF + ++ +H+TFP L
Sbjct: 41 AAAVSSLYFPLFPSSATFLHNLLIRASAASPSP--RLSFAAFSSLLRSGHLPDHFTFPPL 98
Query: 164 GKVCAGIRSL-REGKKVHARIVKCGFELDLFVRNSLIHMYSV------------------ 204
K + S R G +VHA+ + G D F NSL+ MY+
Sbjct: 99 AKSASKFPSFPRTGAQVHAQAARRGLLADAFAVNSLLAMYAALRDAASMRGVLESCAEAA 158
Query: 205 --------------CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
CGE+ +AR+ F+ P + +W++M+ Y ++ AR++FD P
Sbjct: 159 DVVSWNTVVAGYARCGELGNARRAFDGMPRRNGASWSAMVGAYAAAGQLDVARDMFDRAP 218
Query: 251 E--RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
R + TWNSM++G G + A +FD MP R++VSWN M+ GYA G+V AR F
Sbjct: 219 AAGRSVVTWNSMVAGLARHGLLPLARKMFDEMPARNLVSWNAMVRGYAVNGDVDGARELF 278
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D M ++VVSW +++ Y R + + L LF M GD +PNE +++SV +ACA + +
Sbjct: 279 DAMPEKDVVSWTCMVSGYARAGRHAQALELFRTMQSGDVRPNEVTMVSVFSACARLAALK 338
Query: 369 IGQWIHSYIQKCRIKPD--VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
G+W H++I K + D L +L+ MYAKCG D+A VF ++ KNV +WN++I G
Sbjct: 339 EGRWAHAFIGKRGMVLDDGFNLGAALIDMYAKCGRPDVAAKVFRSLDRKNVSAWNALIAG 398
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
+G + +++F +M+ P+ TF+ VL+AC AG+V EG F M + ++P
Sbjct: 399 LAANGDARRCIDVFEQMKVSDEKPDSVTFVSVLAACARAGLVDEGRRCFRSMSSGFGVQP 458
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+++HYGCMVDLLGRAGL+ ++EELV +PM + LL AC ++ + V + +
Sbjct: 459 ELKHYGCMVDLLGRAGLVDEAEELVRGMPMAPDDKVLATLLGACRVRRRPDVAERVRRRI 518
Query: 547 MELEPRDPG--PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
L + P Y ++S++ A+ +W + M + + K GS
Sbjct: 519 QSLNTKQPSRESYFMISDVRATADRWAVALKAKGFMHKYNIMKLDGS 565
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 298/546 (54%), Gaps = 25/546 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H L G +SF + L + L ++ S + D NT++ S
Sbjct: 223 QVHAYGLRKG-ELNSFIIN-TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLF 193
AL Y +M+ + VE + +T + C+ + LR GK++HA +K G + + F
Sbjct: 281 EQLLEALE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V ++L+ MY C +VL R+VF+ + WN+MI GY +N A LF M E
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 254 IFTWNSM-ISGYVDV-------GDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
NS ++G V EA +G RD N ++D Y+++G + A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-----------IRGDAKPNEAS 353
F +M R++V+WN ++ YV + + + L L +M R KPN +
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
LM++L +CA + + G+ IH+Y K + DV + ++L+ MYAKCG + ++R VFD +
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+KNV++WN +IM YGMHG G++A+++ M +G PN+ TFI V +AC+H+GMV EG
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA-LWGALLSACST 532
F +M+ Y +EP +HY C+VDLLGRAG ++++ +L++ +P + A W +LL A
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H+N E+G+I AQ+L++LEP YVLL+NIY+S G WD+ +RR MKE+ + K G S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 593 LVHPGE 598
+ G+
Sbjct: 760 WIEHGD 765
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 172/339 (50%), Gaps = 21/339 (6%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD-LFVRNSLIHMYS 203
Y M+ ++ ++Y FP L K A ++ + GK++HA + K G+ +D + V N+L+++Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG+ KVF+ + V+WNS+I + A E F M + ++ FT S
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 260 MISGYVDV--------GDMEAANGLF--DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+++ ++ G A GL +L F N ++ Y K+G + S++
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF----IINTLVAMYGKLGKLASSKVLLG 260
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
R++V+WN +L+ + + E L M+ +P+E ++ SVL AC+++ ++
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 370 GQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ +H+Y ++ + + + ++L+ MY C + R VFD M ++ + WN+MI GY
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 429 MHGQGEKALEMFMEMEKR-GPTPNDATFICVLSACTHAG 466
+ ++AL +F+ ME+ G N T V+ AC +G
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 210/491 (42%), Gaps = 36/491 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
QIH + G DS + L L FD I E + N+++ S
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI---RSLREGKKVHARIVKCGFELD 191
AL + M+ + VE + +T + C+ + L GK+VHA ++ G EL+
Sbjct: 178 EKWEMALE-AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELN 235
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFARELFD 247
F+ N+L+ MY G++ ++ + DLVTWN+++ +N + + + RE+
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 248 FMPERDIFTWNS---------MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
E D FT +S M+ ++ NG D F + ++D Y
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG----SALVDMYCNC 351
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSV 357
V S R FD M R + WN ++A Y + + E L LF M N ++ V
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+ AC G + IH ++ K + D + +L+ MY++ G +D+A +F M ++++
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEK------RGPT-----PNDATFICVLSACTHAG 466
V+WN+MI GY E AL + +M+ +G + PN T + +L +C
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ +G + + V +VD+ + G ++ S ++ ++P + W +
Sbjct: 532 ALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589
Query: 527 LSACSTHSNSE 537
+ A H N +
Sbjct: 590 IMAYGMHGNGQ 600
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 11/228 (4%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLM-----PFRDVVSWNCMIDGYAKIGNVTSARNC 307
D + + +++ D+ DME + + V N +++ Y K G+ +
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FDR+ RN VSWN L++ + + L F M+ + +P+ +L+SV+TAC+N+ +
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 368 D---IGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ +G+ +H+Y ++K + ++ +L+ MY K G + ++ + + +++V+WN++
Sbjct: 216 EGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ + Q +ALE EM G P++ T VL AC+H M+ G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W LL VR E + + MI KP+ + ++L A A++ +++G+ IH+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 379 KCRIKPD-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K D V ++ +L+ +Y KCG VFD ++E+N VSWNS+I + E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGM 467
E F M P+ T + V++AC++ M
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
>gi|15223380|ref|NP_174012.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216976|sp|Q9ZVG8.1|PPR60_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g26900, mitochondrial; Flags: Precursor
gi|4262179|gb|AAD14496.1| Hypothetical protein [Arabidopsis thaliana]
gi|332192635|gb|AEE30756.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 294/526 (55%), Gaps = 22/526 (4%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
++ L SC E +IH ++ +GL +D FA S++L +S+ + + F+ +
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA--FSSVLDIRYASSIFEHVS 86
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ FM NT+++ + + ++P A S + ++ AK + + ++F K C+ + G+
Sbjct: 87 NTNLFMFNTMIRGYSISDEPERAFSVF-NQLRAKGLTLDRFSFITTLKSCSRELCVSIGE 145
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP-VWDLVTWNSMIDGYVKN 236
+H ++ GF + +RN+LIH Y VCG++ DARKVF++ P D VT++++++GY++
Sbjct: 146 GLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQV 205
Query: 237 REVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGL--------FDLMPFRD 284
+ A +LF M + ++ T S +S D+GD+ A DL D
Sbjct: 206 SKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL----D 261
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+ +I Y K G ++SAR FD ++VV+WN ++ Y + EC+ L +M
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
KPN ++ + +L++CA +G+ + +++ RI D +L T+L+ MYAK G+++
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG--PTPNDATFICVLSAC 462
A +F+ M +K+V SW +MI GYG HG +A+ +F +ME+ PN+ TF+ VL+AC
Sbjct: 382 AVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+H G+V+EG F M Y PKVEHYGC+VDLLGRAG + ++ EL+ LP+ +
Sbjct: 442 SHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTA 501
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
W ALL+AC + N++LG+ V L E+ P +LL+ +A G
Sbjct: 502 WRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 295/529 (55%), Gaps = 12/529 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H+ ++ +G+S D +L L + S + + F Q + + N ++ +F L
Sbjct: 335 QLHSYVIKAGISSDMIVEGALLD-LYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKL 393
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
++ + + +M K + N +T+P + + C + +L G+++H +++K GF+ +++V
Sbjct: 394 DNLSESFRIF-RQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYV 452
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
+ LI MY+ G++ A + D+V+W ++I GY ++ A + F M R I
Sbjct: 453 CSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGI 512
Query: 255 FTWNSMISGYVDV-GDMEAANGLFDLMPFRDVVSW-------NCMIDGYAKIGNVTSARN 306
+ N S + ++A N + V + N ++ YA+ G + A
Sbjct: 513 QSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYL 572
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCE-CLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
F+++ ++ +SWN L++ + + YCE L++F +M R + + + S ++A AN+
Sbjct: 573 EFEKIDAKDSISWNGLISGFAQ-SGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIA 631
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
I G+ IH+ I K D+ +S +L+T YAKCG ++ AR F M EKN VSWN+MI
Sbjct: 632 NIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMIT 691
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY HG G +A+ +F +M++ G PN TF+ VLSAC+H G+V +G YF+ M + + +
Sbjct: 692 GYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLV 751
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
PK HY C+VDL+ RAG + + + + ++P+E +W LLSAC+ H N E+G+ AQH
Sbjct: 752 PKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQH 811
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L+ELEP D YVLLSN+YA GKWD + R++M+ + ++K G S +
Sbjct: 812 LLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWI 860
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 43/487 (8%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF 131
E ++H ++L G +S LC L V ++ DG+ + M N ++S+
Sbjct: 28 ECKKLHGKILKLGFGNESV--------LCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSW 79
Query: 132 LMLNDPFGALSFYYEKMMAK--------FVEHN----HYTFPLLGKVCAGIR-SLREGKK 178
+ +S + EK M+ +E N +F + + C+G R +R ++
Sbjct: 80 DKI------ISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQ 133
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HARI+ G + N LI +Y+ G ++ ARKVF++ D V+W +MI G+ +N
Sbjct: 134 IHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGY 193
Query: 239 VGFARELFDFMPERDIF----TWNSMISG-----YVDVGDMEAANGLFDLMPFRDVVSWN 289
A LF M IF ++S++SG DVG+ A +F + N
Sbjct: 194 EEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL-VFKYGSSLETYVCN 252
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++ Y+++ N SA F +M ++ VS+N L++ + L LF +M R KP
Sbjct: 253 ALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKP 312
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ ++ S+L+ACA+ G + G+ +HSY+ K I D+++ +LL +Y C + A +F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
+NVV WN M++ +G ++ +F +M+ +G PN T+ +L CT G +
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD 432
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
G + ++ K + Y C ++D+ + G + D+ ++ + E W AL+
Sbjct: 433 LGE---QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKL-DTAHVILRTLTEDDVVSWTALI 488
Query: 528 SACSTHS 534
S + H+
Sbjct: 489 SGYAQHN 495
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 199/413 (48%), Gaps = 23/413 (5%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C++V QIHTQ++ +G + + S VL + + + + + E D
Sbjct: 422 LRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS-VLIDMYAKHGKLDTAHVILRTLTEDD 480
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
++ + N AL ++++M+ + ++ ++ F CAGI++L +G+++H
Sbjct: 481 VVSWTALISGYAQHNLFAEALK-HFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIH 539
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A+ G+ DL + N+L+ +Y+ CG + +A FE D ++WN +I G+ ++
Sbjct: 540 AQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCE 599
Query: 241 FARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
A ++F M E FT+ S +S ++ +++ + ++ R D+ N +I
Sbjct: 600 DALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALI 659
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YAK G++ AR F M +N VSWN ++ Y + E + LF++M + PN
Sbjct: 660 TFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHV 719
Query: 353 SLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ + VL+AC+++G++ G + S ++ + P ++ + ++ G + AR +
Sbjct: 720 TFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEE 779
Query: 412 M-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLS 460
M E + W +++ +H GE A + +E+E P D+ +LS
Sbjct: 780 MPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELE-----PEDSATYVLLS 827
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 195/414 (47%), Gaps = 16/414 (3%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N T+ L +C SL E KK+H +I+K GF + + N L+ +Y G++ KVF
Sbjct: 9 NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMI---SGY---V 265
ED P + +W+ +I G+++ + +LF M E ++ ++ S++ SG+ +
Sbjct: 69 EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+ A + + ++S N +I YAK G + SAR FD +C ++ VSW +++
Sbjct: 129 RYAEQIHARIICHGLLCSPIIS-NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+ + E + LF M P SVL+ C + + D+G+ +H+ + K +
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+ +L+T+Y++ A VF M K+ VS+NS+I G G + ALE+F +M++
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
P+ T +LSAC G + +G + + I + G ++DL ++
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKA-GISSDMIVEGALLDLYVNCSDIK 366
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSN-SELGKIVAQHLMELEPRDPGPYV 558
+ E+ E LW +L A N SE +I Q M+++ P +
Sbjct: 367 TAHEMFLTAQTE-NVVLWNVMLVAFGKLDNLSESFRIFRQ--MQIKGLIPNQFT 417
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 310/566 (54%), Gaps = 33/566 (5%)
Query: 55 DLSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
D S +LQ L T K Q H+++L GLSQ+SF A++++ S L
Sbjct: 21 DPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYH-SRL 79
Query: 112 FFDGIQEPDAFMCNTIMKSFL---MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
FD +Q + F+ N+++ + + N+ F + +M + V + +T L KV +
Sbjct: 80 VFDSLQHKNVFLWNSLINGCVKNRLYNEAFQ----LFNQMCSSDVLPDDFTLSTLSKVSS 135
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ +L GK +H + ++ GF D V NS++ MY CG ++RKVF++ + + +WN
Sbjct: 136 ELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNV 195
Query: 229 MIDGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANGLFDLMP 281
+I GY + F E ++F+ + D +T +S++ + GDM + +L
Sbjct: 196 LIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLP--LCDGDMGKWDYGRELHC 253
Query: 282 F-----------RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ DV C+ID Y++ V R FDRM RNV SW ++ YV
Sbjct: 254 YIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENG 313
Query: 331 DYCECLRLF-DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
D E L LF D + +PN SL+SVL AC++ + G+ IH + + + +V L
Sbjct: 314 DSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLC 373
Query: 390 TSLLTMYAKCGVMDLARNVF-DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
+L+ MY+KCG +D AR VF D+ K+ +SW+SMI GYG+HG+G++A+ ++ +M + G
Sbjct: 374 NALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGI 433
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
P+ T + +LSAC +G+V EG + + Y IEP +E C+VD+LGRAG + +
Sbjct: 434 RPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRAL 493
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+ + +P+E GP++WGAL+S H + E+ ++ + L++LEP++P YV +SN+YAS
Sbjct: 494 DFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSR 553
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLV 594
+WD V +RR+MK+K L K G S +
Sbjct: 554 RWDAVAEVRRMMKDKRLRKVPGCSWI 579
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 298/546 (54%), Gaps = 25/546 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H L G +SF + L + L ++ S + D NT++ S
Sbjct: 223 QVHAYGLRKG-ELNSFIIN-TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLF 193
AL Y +M+ + VE + +T + C+ + LR GK++HA +K G + + F
Sbjct: 281 EQLLEALE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V ++L+ MY C +VL R+VF+ + WN+MI GY +N A LF M E
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 254 IFTWNSM-ISGYVDV-------GDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
NS ++G V EA +G RD N ++D Y+++G + A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-----------IRGDAKPNEAS 353
F +M R++V+WN ++ YV + + + L L +M R KPN +
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
LM++L +CA + + G+ IH+Y K + DV + ++L+ MYAKCG + ++R VFD +
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+KNV++WN +IM YGMHG G++A+++ M +G PN+ TFI V +AC+H+GMV EG
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA-LWGALLSACST 532
F +M+ Y +EP +HY C+VDLLGRAG ++++ +L++ +P + A W +LL A
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H+N E+G+I AQ+L++LEP YVLL+NIY+S G WD+ +RR MKE+ + K G S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 593 LVHPGE 598
+ G+
Sbjct: 760 WIEHGD 765
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 172/339 (50%), Gaps = 21/339 (6%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD-LFVRNSLIHMYS 203
Y M+ ++ ++Y FP L K A ++ + GK++HA + K G+ +D + V N+L+++Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG+ KVF+ + V+WNS+I + A E F M + ++ FT S
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 260 MISGYVDV--------GDMEAANGLF--DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+++ ++ G A GL +L F N ++ Y K+G + S++
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF----IINTLVAMYGKLGKLASSKVLLG 260
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
R++V+WN +L+ + + E L M+ +P+E ++ SVL AC+++ ++
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 370 GQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ +H+Y ++ + + + ++L+ MY C + R VFD M ++ + WN+MI GY
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 429 MHGQGEKALEMFMEMEKR-GPTPNDATFICVLSACTHAG 466
+ ++AL +F+ ME+ G N T V+ AC +G
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 210/491 (42%), Gaps = 36/491 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
QIH + G DS + L L FD I E + N+++ S
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI---RSLREGKKVHARIVKCGFELD 191
AL + M+ + VE + +T + C+ + L GK+VHA ++ G EL+
Sbjct: 178 EKWEMALE-AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELN 235
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFARELFD 247
F+ N+L+ MY G++ ++ + DLVTWN+++ +N + + + RE+
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 248 FMPERDIFTWNS---------MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
E D FT +S M+ ++ NG D F + ++D Y
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG----SALVDMYCNC 351
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSV 357
V S R FD M R + WN ++A Y + + E L LF M N ++ V
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+ AC G + IH ++ K + D + +L+ MY++ G +D+A +F M ++++
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEK------RGPT-----PNDATFICVLSACTHAG 466
V+WN+MI GY E AL + +M+ +G + PN T + +L +C
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ +G + + V +VD+ + G ++ S ++ ++P + W +
Sbjct: 532 ALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589
Query: 527 LSACSTHSNSE 537
+ A H N +
Sbjct: 590 IMAYGMHGNGQ 600
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 11/228 (4%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLM-----PFRDVVSWNCMIDGYAKIGNVTSARNC 307
D + + +++ D+ DME + + V N +++ Y K G+ +
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FDR+ RN VSWN L++ + + L F M+ + +P+ +L+SV+TAC+N+ +
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 368 D---IGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ +G+ +H+Y ++K + ++ +L+ MY K G + ++ + + +++V+WN++
Sbjct: 216 EGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ + Q +ALE EM G P++ T VL AC+H M+ G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W LL VR E + + MI KP+ + ++L A A++ +++G+ IH+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 379 KCRIKPD-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K D V ++ +L+ +Y KCG VFD ++E+N VSWNS+I + E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGM 467
E F M P+ T + V++AC++ M
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 286/551 (51%), Gaps = 39/551 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + P +C+T + S + L + M K PL+ K CA
Sbjct: 26 LFDAVPRPAPALCSTFLSSLSRASSHHDLLQ-TFSSMHRKGAYVPSGCVPLVFKSCALTA 84
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
S +G++VH + G D+FV +L+ Y+ G++ A F++ PV D + N +I
Sbjct: 85 SSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCLIT 144
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM----------- 280
GY K +V AR LFD M R +WNSMI+ Y G+ A LFD M
Sbjct: 145 GYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAIT 204
Query: 281 ---------------------------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
++V+ +++ Y K + AR FDRM
Sbjct: 205 ITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQ 264
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
R+VV+W+ ++A Y + E L LF+RM D +PNE +L+ V++ACA +G ++ + I
Sbjct: 265 RDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQI 324
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+Y + R+ L ++L+ MY +CG + AR+VF M +K V++WNSMI G M+G
Sbjct: 325 GNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFA 384
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
E A+ ++ +M + G PN+ TF+ +L+ACTHAG+V +G +F+ M+R + + P+VEH C
Sbjct: 385 EDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCAC 444
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
+VDLL ++G + ++ + + + +E +W LLS+C H++ EL K+ ++ L+ +EP +
Sbjct: 445 IVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDN 504
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
YVLLSNIYA G W + +R +M+ K ++K S + + +V++ R
Sbjct: 505 SSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRS 564
Query: 614 CIVYSMLGEIG 624
+Y ++ +G
Sbjct: 565 AEIYDVIHGLG 575
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 79/207 (38%), Gaps = 31/207 (14%)
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+ARN FD + + L+ R + + L+ F M R A + V +CA
Sbjct: 22 AARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCA 81
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM-------------------- 402
G+ +H + + DV + T+L+ YAK G M
Sbjct: 82 LTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINC 141
Query: 403 -----------DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
D AR +FD M + SWNSMI Y G+ +AL +F M G PN
Sbjct: 142 LITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPN 201
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLM 478
T V S C +G + G DL+
Sbjct: 202 AITITSVFSICAKSGDLDTGKRVRDLI 228
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 300/546 (54%), Gaps = 13/546 (2%)
Query: 60 ILQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
I L +C+++ + + Q+H+ LL +G+S D +L L + ++ F
Sbjct: 247 IASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLD-LYVKCGVIVEALEIFKSG 305
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+ + N ++ ++ ++D + + + M+A V N +T+P L + C + G
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQ-MVAAGVRPNEFTYPCLLRTCTYAGEINLG 364
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+++H +K GFE D++V LI MYS G + AR++ E D+V+W SMI GYV++
Sbjct: 365 EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQH 424
Query: 237 REVGFARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFDLMPFR----DVVSW 288
A E F M I+ N S IS + M + + DV W
Sbjct: 425 EFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIW 484
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N +++ YA+ G A + F+ + ++ ++WN +++ + + Y E L +F +M + K
Sbjct: 485 NALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVK 544
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
N + +S ++A AN+ I G+ IH+ + K + ++ +L+++Y KCG ++ A+
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQ 604
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F M+E+N VSWN++I HG G +AL++F +M++ G PND TFI VL+AC+H G+V
Sbjct: 605 FFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 664
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M + I P+ +HY C+VD+LGRAG + + + V ++P+ A +W LLS
Sbjct: 665 EEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLS 724
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N E+G++ A++L+ELEP D YVLLSN YA GKW +++R++MK++ + K
Sbjct: 725 ACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKE 784
Query: 589 VGSSLV 594
G S +
Sbjct: 785 PGRSWI 790
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 168/344 (48%), Gaps = 9/344 (2%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN-- 236
+HA+ + CG D N LI +Y+ G V AR+VFE D V+W +M+ GY +N
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 237 --REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN----GLFDLMPFRDVVSWNC 290
VG ++ + +S++S E ++ + V N
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+I Y + G+++ A F M + V++N L++ + +C + L +F+ M P+
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
++ S+L ACA++G ++ G+ +HSY+ K + PD ++ SLL +Y KCGV+ A +F
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+ NVV WN M++ YG K+ ++F +M G PN+ T+ C+L CT+AG +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
G L+ E + G ++D+ + G + + ++ L
Sbjct: 364 G-EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVL 406
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 198/445 (44%), Gaps = 15/445 (3%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH + + GL +D A + +L L V + F+ + D ++ +
Sbjct: 64 IHAKAITCGLGEDRIAGN-LLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
A+ Y++ M V Y + C +G+ VHA++ K G + V
Sbjct: 123 LGEEAVGLYHQ-MHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVG 181
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----E 251
N+LI +Y G + A +VF + P D VT+N++I + + A E+F+ M
Sbjct: 182 NALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWT 241
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARNC 307
D T S+++ +GD+ L + D + ++D Y K G + A
Sbjct: 242 PDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEI 301
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F NVV WN++L Y + D + LF +M+ +PNE + +L C G I
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
++G+ IH K + D+ +S L+ MY+K G +D AR + + + K+VVSW SMI GY
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGY 421
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY--KIE 485
H ++ALE F +M+ G P++ +SAC + +G + R+Y
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQ---QIHSRVYVSGYS 478
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEEL 510
V + +V+L R G +++ L
Sbjct: 479 ADVSIWNALVNLYARCGRSKEAFSL 503
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/414 (37%), Positives = 242/414 (58%), Gaps = 16/414 (3%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVW--------------DLVTWNSMIDGYVKNREVGF 241
N+LI Y G V DAR++F P ++V+WNSM+ Y++ +V
Sbjct: 234 NTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCS 293
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
AR LFD MP +D+ +WN+MI+GY +ME A LF +P D V+WN MI G+ + G+V
Sbjct: 294 ARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPDPDAVTWNLMIRGFTQKGDV 353
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDRM R+ ++WN +++ Y + +DY ++LF RM+ +P+ +L SVL AC
Sbjct: 354 EHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAAC 413
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSW 420
A++ ++ +G +H I+K + PD + +L+TMY++CG + A+ +F +M T++++VSW
Sbjct: 414 ASLAMLRLGAQLHQLIEKSFL-PDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSW 472
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N++I GY G +AL +F EM P TFI +LSAC +AG+V EG F M
Sbjct: 473 NALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVSEGRVVFHTMVH 532
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y + VEHY +V+L+GR G + D+ EL+ +P+ A+WGA L AC+ N L +
Sbjct: 533 DYGLAASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAVWGAFLGACTAKKNEPLAE 592
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A L +++P PYVL+ N++A EG+W +R M+ + K G S +
Sbjct: 593 MAANALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGIHKHPGYSWI 646
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 148/297 (49%), Gaps = 18/297 (6%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---REVGFARELFDFMPER 252
NSL+ S +V AR F+ PV D+++WN+++ Y ++ ++ AR LF MP+R
Sbjct: 71 NSLLAALSRGSDVRAARCFFDAMPVRDIISWNTLLSAYARSLQPNDLAAARRLFYEMPQR 130
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D +W++++ Y G ME A LFD MP R+ SWN MI G+ +G + A N F M
Sbjct: 131 DAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMP 190
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLF-DRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
++ S + +++ ++R E L R+ D + +++ A G + +
Sbjct: 191 DKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDAR 250
Query: 372 WIHSYIQKCR----------IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+ S I K + + +V+ S++ Y + G + AR +FD M K++VSWN
Sbjct: 251 RLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWN 310
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+MI GY + E+A ++F E+ P P+ T+ ++ T G V +FD M
Sbjct: 311 TMIAGYTQASEMEEAEKLFWEV----PDPDAVTWNLMIRGFTQKGDVEHARGFFDRM 363
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + E NT++ + N+ + + +++M+ +H+T + CA +
Sbjct: 359 FFDRMPERSTITWNTMISGYEQ-NEDYDSTIKLFQRMLEVGERPDHHTLSSVLAACASLA 417
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW-DLVTWNSMI 230
LR G ++H ++++ F D N+L+ MYS CGE++ A+ +F D+V+WN++I
Sbjct: 418 MLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALI 476
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM 280
GY + A LF+ M + T+ S++S + G + +F M
Sbjct: 477 GGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVSEGRVVFHTM 530
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 325/602 (53%), Gaps = 32/602 (5%)
Query: 54 VDLSH---PILQKLESC---STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVS 107
V L+H +L L+ C + K Q H Q+L +G +Q++F A+R++ T ++
Sbjct: 22 VSLAHTPQSLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATC-GELA 80
Query: 108 LSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
S F+ ++ ++ N+++ ++ +D AL+ + E M + + YT + KV
Sbjct: 81 TSRFVFESVEAKSVYLWNSLINGYVKNHDFRQALALFRE-MGRNGMLPDDYTLATVFKVF 139
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
+ L GK +H + ++ GF D+ V NSL+ MY CGE DA KVF++ P ++ ++N
Sbjct: 140 GELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFN 199
Query: 228 SMIDGYVKNREVGFAR--ELFDFMP-------ERDIFTWNSMI------SGYVDVGD--- 269
+I G F +L +F + D FT S++ +G D G
Sbjct: 200 VVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELH 259
Query: 270 -MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
NGL DL DV + +ID Y++ V R FD+M RNV W ++ YV+
Sbjct: 260 CYVVKNGL-DLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQ 318
Query: 329 CKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ L L M D +PN+ SL+S L AC + + G+ IH + K + DV
Sbjct: 319 NGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVS 378
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
L +L+ MY+KCG +D AR F+ + K+ ++W+SMI YG+HG+GE+A+ + +M ++
Sbjct: 379 LCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQ 438
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G P+ T + VLSAC+ +G+V EG + + Y+I+P VE C+VD+LGR+G +
Sbjct: 439 GFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQ 498
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ E + ++P++ GP++WG+LL+A H NS + +HL+ELEP +P Y+ LSN YAS
Sbjct: 499 ALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYAS 558
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGA 625
+ +WD V +R IMKE+ L+K G S + G+ S S+ + P ++Y MLG++ +
Sbjct: 559 DRRWDVVTEVRTIMKERGLKKVPGCSWITISGKTHSFSVADKAHPSSS-LIYEMLGDLVS 617
Query: 626 QM 627
M
Sbjct: 618 IM 619
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 293/577 (50%), Gaps = 78/577 (13%)
Query: 20 FIKSQKNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQ 79
F S +P++P + + KP+ ++T +DL L + ++ E Q+H Q
Sbjct: 3 FALSSFPIPQSPNRNQIHHVKPQSSETLK-----IDL-------LRNFNSPFELRQVHAQ 50
Query: 80 LLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI--QEPDAFMCNTIMKSFLMLNDP 137
++ + +RV +C S + F+ + Q+P+ F+ N+ +K+ + P
Sbjct: 51 IIKTNAPLSILPLTRV-GLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKALAEGDSP 109
Query: 138 FGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNS 197
A+ LF R
Sbjct: 110 IDAIM-------------------------------------------------LFYR-- 118
Query: 198 LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTW 257
+ Y VC + V ++ ++ G V+ +VGF +++
Sbjct: 119 -LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE--KVGF---------RSNLYLQ 166
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
N ++ Y G+M A LF+ MP RDVV+WN MI K G+ A + F RM RNV
Sbjct: 167 NMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVR 226
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SW ++A YV+C E + LF +M K NE ++++VL ACA++G +D+G IH Y
Sbjct: 227 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 286
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
+ K +V +S +L+ MY KCG ++ A VF+ M E+ VVSW++MI G MHG+ E+AL
Sbjct: 287 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEAL 346
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
+F +M + G PN TFI +L AC+H G++ EG +F M R Y I P++EHYGCMVDL
Sbjct: 347 RLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDL 406
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
L RAGL+ ++ E + +PM+ +WGALL AC H N E+ + +HL+EL+P + G Y
Sbjct: 407 LSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYY 466
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
V+LSNIYA G+W++ +R+ MK+++++K G S +
Sbjct: 467 VVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSI 503
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 298/546 (54%), Gaps = 25/546 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H L G +SF + L + L ++ S + D NT++ S
Sbjct: 136 QVHAYGLRKG-ELNSFIIN-TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 193
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLF 193
AL Y +M+ + VE + +T + C+ + LR GK++HA +K G + + F
Sbjct: 194 EQLLEALE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 252
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V ++L+ MY C +VL R+VF+ + WN+MI GY +N A LF M E
Sbjct: 253 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 312
Query: 254 IFTWNSM-ISGYVDV-------GDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
NS ++G V EA +G RD N ++D Y+++G + A
Sbjct: 313 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 372
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-----------IRGDAKPNEAS 353
F +M R++V+WN ++ YV + + + L L +M R KPN +
Sbjct: 373 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 432
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
LM++L +CA + + G+ IH+Y K + DV + ++L+ MYAKCG + ++R VFD +
Sbjct: 433 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 492
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+KNV++WN +IM YGMHG G++A+++ M +G PN+ TFI V +AC+H+GMV EG
Sbjct: 493 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 552
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA-LWGALLSACST 532
F +M+ Y +EP +HY C+VDLLGRAG ++++ +L++ +P + A W +LL A
Sbjct: 553 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 612
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H+N E+G+I AQ+L++LEP YVLL+NIY+S G WD+ +RR MKE+ + K G S
Sbjct: 613 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 672
Query: 593 LVHPGE 598
+ G+
Sbjct: 673 WIEHGD 678
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 171/336 (50%), Gaps = 21/336 (6%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD-LFVRNSLIHMYSVCG 206
M+ ++ ++Y FP L K A ++ + GK++HA + K G+ +D + V N+L+++Y CG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMIS 262
+ KVF+ + V+WNS+I + A E F M + ++ FT S+++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 263 GYVDV--------GDMEAANGL--FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
++ G A GL +L F N ++ Y K+G + S++
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNSF----IINTLVAMYGKLGKLASSKVLLGSFG 176
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
R++V+WN +L+ + + E L M+ +P+E ++ SVL AC+++ ++ G+
Sbjct: 177 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 236
Query: 373 IHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+H+Y ++ + + + ++L+ MY C + R VFD M ++ + WN+MI GY +
Sbjct: 237 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 296
Query: 432 QGEKALEMFMEMEKR-GPTPNDATFICVLSACTHAG 466
++AL +F+ ME+ G N T V+ AC +G
Sbjct: 297 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 332
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 210/491 (42%), Gaps = 36/491 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
QIH + G DS + L L FD I E + N+++ S
Sbjct: 31 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 90
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI---RSLREGKKVHARIVKCGFELD 191
AL + M+ + VE + +T + C+ + L GK+VHA ++ G EL+
Sbjct: 91 EKWEMALE-AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELN 148
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFARELFD 247
F+ N+L+ MY G++ ++ + DLVTWN+++ +N + + + RE+
Sbjct: 149 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 208
Query: 248 FMPERDIFTWNS---------MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
E D FT +S M+ ++ NG D F + ++D Y
Sbjct: 209 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG----SALVDMYCNC 264
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSV 357
V S R FD M R + WN ++A Y + + E L LF M N ++ V
Sbjct: 265 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 324
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+ AC G + IH ++ K + D + +L+ MY++ G +D+A +F M ++++
Sbjct: 325 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 384
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEK------RGPT-----PNDATFICVLSACTHAG 466
V+WN+MI GY E AL + +M+ +G + PN T + +L +C
Sbjct: 385 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 444
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ +G + + V +VD+ + G ++ S ++ ++P + W +
Sbjct: 445 ALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 502
Query: 527 LSACSTHSNSE 537
+ A H N +
Sbjct: 503 IMAYGMHGNGQ 513
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 11/228 (4%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLM-----PFRDVVSWNCMIDGYAKIGNVTSARNC 307
D + + +++ D+ DME + + V N +++ Y K G+ +
Sbjct: 9 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 68
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FDR+ RN VSWN L++ + + L F M+ + +P+ +L+SV+TAC+N+ +
Sbjct: 69 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 128
Query: 368 D---IGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ +G+ +H+Y ++K + ++ +L+ MY K G + ++ + + +++V+WN++
Sbjct: 129 EGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 186
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ + Q +ALE EM G P++ T VL AC+H M+ G
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 234
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD-VLLSTSLLTMYAKCG 400
MI KP+ + ++L A A++ +++G+ IH+++ K D V ++ +L+ +Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
VFD ++E+N VSWNS+I + E ALE F M P+ T + V++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 461 ACTHAGM 467
AC++ M
Sbjct: 121 ACSNLPM 127
>gi|125587880|gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
Length = 559
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 272/516 (52%), Gaps = 53/516 (10%)
Query: 148 MMAKFVEHNHYTF-PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
M+A + + TF LL V A RS+ GK+VHA +V G +++RNSLI MY G
Sbjct: 3 MLASSIHPDEQTFLSLLKSVDAERRSV--GKQVHAHVVVTGLHSRVYLRNSLIKMYLDAG 60
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI------------ 254
+V A +F P D V+ N M+ GYVK G A F M R I
Sbjct: 61 DVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRGIGVDQYTAVALLA 120
Query: 255 -----------------------------FTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
N+++ Y G+M A +FD RD
Sbjct: 121 CCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAGERDG 180
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
+SWN M+ G+A G + A F R+++SWN LLA Y R +++ + LF M+
Sbjct: 181 ISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLAS 240
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
P++ + +++++A A G ++ + +H ++ K D L+++L+ MY KCG + LA
Sbjct: 241 SVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGSIKLA 300
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
VF+ +K+V W +MI G HG G+ AL++F +M+ G PN T + VLSAC+HA
Sbjct: 301 YAVFEKAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHA 360
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+ EG FD +++ + IEP VEH+GCMVDLL R+G + D+ +L ++PM+ ++WG+
Sbjct: 361 GLFDEGCKIFDTLKQRFNIEPGVEHFGCMVDLLARSGRLSDAVDLARRMPMKPSRSIWGS 420
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
+LSA S N+E+ +I ++ L+ LEP + G YVLLSN+YA+EG+W+ +R M+ K +
Sbjct: 421 ILSASSACQNTEVAEIASKELLCLEPAEEGGYVLLSNMYAAEGQWNYSNEVRENMERKGV 480
Query: 586 EKAVGSSLVHPGEFASESIVENC------PPHRKCI 615
K S+ ++ S+V N P H KCI
Sbjct: 481 RK---SADTETAKYKELSMVTNFPYFSSPPEHIKCI 513
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 201/311 (64%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D ++N +I YA+ G VT AR FD M RN VSW+ ++ YV+ D E L LF RM
Sbjct: 276 DASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ 335
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+P++ L+ VL ACA +GV++ G+W+H Y++ I+ V L T+L+ MYAKCG M
Sbjct: 336 ADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQ 395
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
LA VF M EKNV++W +MI G MHG+G +ALE+F +ME+ G P+D FI L ACT
Sbjct: 396 LAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACT 455
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V +G FD M R Y I+PK+EHYGCMVDLL R GL+ ++ E+V K+PM+ +W
Sbjct: 456 HTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIW 515
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GAL++ C H N EL + V +H +ELEP G YVLL NIYA+ G+ +R +M+EK
Sbjct: 516 GALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREK 575
Query: 584 ELEKAVGSSLV 594
++K G S V
Sbjct: 576 GVDKTPGCSTV 586
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 170/401 (42%), Gaps = 54/401 (13%)
Query: 95 VLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE 154
VLK L + L G A + N ++++ P AL Y + A
Sbjct: 145 VLKTRLQELIGEDQAALVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGHHP 204
Query: 155 HNHYTFPLLGKVCA------GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS-VCGE 207
H T P L K A G R L VHA VK G L V N+LI +++ + G
Sbjct: 205 TPH-TLPSLLKSLALSPAVPGARGL--ALAVHAHAVKLGLAGFLLVSNALIRVHAGILGR 261
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
+ DA + D T+N++I Y + V AR LFD MP R+ +W++M++GYV
Sbjct: 262 LSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQA 321
Query: 268 GDMEAANGLFDLMPFRDVV----------------------SW----------------- 288
GD A GLF M V W
Sbjct: 322 GDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLG 381
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
++D YAK G + A F M +NV++W ++ E L LF +M R K
Sbjct: 382 TALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVK 441
Query: 349 PNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
P++ + + L AC + G++D G + S ++K IKP + ++ + A+ G+++ AR
Sbjct: 442 PDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEARE 501
Query: 408 VFDNMTEK-NVVSWNSMIMGYGMHGQGEKA---LEMFMEME 444
+ + M K + + W +++ G H E A ++ ++E+E
Sbjct: 502 MVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELE 542
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/561 (33%), Positives = 300/561 (53%), Gaps = 77/561 (13%)
Query: 64 LESCSTVKEFHQIHTQLLVSGL--SQDSFAASRVLKKLCT--SLSSVSLSVLFFDGIQEP 119
+E C +KE IHT +L S + ++D + L C+ + +S + + F I+ P
Sbjct: 26 IEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHMIKYP 85
Query: 120 DAFMCNTIMKSFLML------NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
+ + N +++S+ + N + AL Y ++M+ K + N+ TFP L K C+ L
Sbjct: 86 ELRVYNIMIRSYGCIEGGDDSNCCYKALMLY-KQMLNKGIVPNNLTFPFLVKGCS---RL 141
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
+ G V GEV+ A +
Sbjct: 142 QYGGTV--------------------------GEVIHAHVL------------------- 156
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
+ GF D+F NS+IS +++ G + A +FD M RDVVSWN M+
Sbjct: 157 ----KFGFLN---------DVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVV 203
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM--IRGD--AKP 349
GY + G V A N F +M RN+++WN ++ V+ E L +F M + GD KP
Sbjct: 204 GYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKP 263
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
++ ++ SVL+ACA +G ID G+W+H+Y++K I+ DV++ T+L+ MY KCG + A +F
Sbjct: 264 DKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIF 323
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
++M EK+ +W +MI + +HG G+KA + F+EMEK G PN TF+ +LSAC+H+G+V
Sbjct: 324 NDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVE 383
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+G FD+M+R+Y IEP++ HY CMVD+L RA L ++ L+ +PM+ +WGALL
Sbjct: 384 QGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGG 443
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H N +LG+ VA +L++LEP + Y+ L +IY GK+D + +R MKE+ +E +
Sbjct: 444 CQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKI 503
Query: 590 -GSSLVHPGEFASESIVENCP 609
G S++ E V P
Sbjct: 504 PGCSIIEINGVVQEFSVGEIP 524
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 263/480 (54%), Gaps = 48/480 (10%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+HYT+PL K CA L G+++H+ + G + ++FV +S I MY+ CG DA ++F
Sbjct: 121 DHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMF 180
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
E+ M RD+ +WN+MISG+ G A
Sbjct: 181 EE-------------------------------MQYRDVVSWNAMISGFAHAGLFGRAMD 209
Query: 276 LFDLMPFRDVVSWNCMID------------GYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
+F R++V+ C G A++ ++ + FD M + ++SWN +L
Sbjct: 210 VF-----RELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAML 264
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
A+Y + + E + LF RM + +P+ +L +VL +C + + +G+ IH I++ R+
Sbjct: 265 AVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMC 324
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
+LL +L+ MYA CG + AR+VFD+M ++VVSW S+I YG HG G +A+++F +M
Sbjct: 325 SSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKM 384
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
+G P+ F+ +L+AC+HAG++ G YF M + I PK+EHY CMVDLLGRAG
Sbjct: 385 CGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGC 444
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
+R++ + + +P++ +WGALL AC HSN ++G + A L+ L P+ G YVLLSNI
Sbjct: 445 IREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNI 504
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
YA G+W +V +R +M+ K ++K G S G+ + + + ++Y L E+
Sbjct: 505 YARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSEL 564
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDA-KPNEASLMSVLTACANMGVIDIGQ 371
R V +N+LL + + L LF M +G A P+ + L +CA + +G+
Sbjct: 83 RTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLGR 142
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
IHS + + +V ++ S ++MYA+CG D A +F+ M ++VVSWN+MI G+ G
Sbjct: 143 QIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAG 202
Query: 432 QGEKALEMFMEMEK-RGPTPNDATFICVL 459
+A+++F E+ + P P+ T +L
Sbjct: 203 LFGRAMDVFRELVALQCPKPDAGTMASIL 231
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 20/195 (10%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ +M +E + T + C + +L GK++H I + + + N+L+ MY+
Sbjct: 280 FMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYAN 339
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-------ERDIFTW 257
CG + +AR VF+ D+V+W S+I Y ++ G RE D E D +
Sbjct: 340 CGCLKEARDVFDSMGTRDVVSWTSIISAYGRH---GHGREAIDLFEKMCGQGLEPDSIAF 396
Query: 258 NSMI-----SGYVDVGD--MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+++ +G +D+G + F + P + + CM+D + G + A +
Sbjct: 397 VAILAACSHAGLLDMGKHYFYSMTSEFHIAP--KLEHYACMVDLLGRAGCIREAYDFIMV 454
Query: 311 MCMR-NVVSWNILLA 324
M ++ N W LL
Sbjct: 455 MPIKPNERVWGALLG 469
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 254/434 (58%), Gaps = 10/434 (2%)
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
G+ L+ G +VHA ++ G + V + ++ Y+ G++ + VF + D T+
Sbjct: 82 GLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNG--IGDYFTFPF 139
Query: 229 MIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
++ V+ V + + + + D++ S+I Y G++ A +FD M RD
Sbjct: 140 VLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRD 199
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
V SWN ++ GY K G + +A F+RM RN+VSW +++ Y + + L LFD M++
Sbjct: 200 VSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVK 259
Query: 345 GDA--KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
D+ +PN ++MSVL ACA + ++ G+ IH + + + + +L MYAKCG +
Sbjct: 260 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSL 319
Query: 403 DLARNVFD--NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
ARN FD N EKN+++WN+MI Y +G G +A+ F EM + G P+D TF +LS
Sbjct: 320 VDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLS 379
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
C+H+G+V G YF+ M Y I P+VEHY C+ DLLGRAG + ++ +LV ++PM AGP
Sbjct: 380 GCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGP 439
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
++WG+LL+AC H N E+ + A+ L LEP + G YVLLSN+YA G+W EV+ LR I+
Sbjct: 440 SIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIV 499
Query: 581 KEKELEKAVGSSLV 594
K + +K+ G S +
Sbjct: 500 KSQGTKKSPGCSWI 513
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 213/496 (42%), Gaps = 91/496 (18%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
PI+ + P+ Q L + +K HQ+H +L+ GL + S+++ +S + SV
Sbjct: 69 PILSYA-PVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASS-GDIDSSVS 126
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+GI + ++TFP + K +
Sbjct: 127 VFNGIGD--------------------------------------YFTFPFVLKSSVELL 148
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
S+ GK VH I++ G + DL+V SLI +Y CGE+ DA KVF++ + D+ +WN+++
Sbjct: 149 SVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLA 208
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD------------- 278
GY K+ + A +F+ MP R+I +W +MISGY G + A LFD
Sbjct: 209 GYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 268
Query: 279 -----LMPF----------RDVVSWNC-------------MIDGYAKIGNVTSARNCFDR 310
++P R + C + YAK G++ ARNCFD+
Sbjct: 269 VTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDK 328
Query: 311 MCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ +N+++WN ++ Y + + F MI+ +P++ + +L+ C++ G++D
Sbjct: 329 LNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVD 388
Query: 369 IG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMG 426
+G ++ + I P V + + + G + A + M S W S++
Sbjct: 389 VGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 448
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
H E A ++ P N ++ + + AG W D ++ I K +
Sbjct: 449 CRKHRNLEMAETAARKLFVLEPE-NTGNYVLLSNMYAEAGR----WQEVDKLRAIVKSQG 503
Query: 487 KVEHYGCM-VDLLGRA 501
+ GC +++ G+A
Sbjct: 504 TKKSPGCSWIEINGKA 519
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/593 (30%), Positives = 299/593 (50%), Gaps = 72/593 (12%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQR-LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG 84
+LP + P PKP N + L +D I+ L+ + + IH QL+ +G
Sbjct: 23 SLPFSGPS-----PKPHPNSNSNPKSLKSLDQKQ-IISLLQRSKHINQVLPIHAQLIRNG 76
Query: 85 LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY 144
SQD F +L+ C+ ++ + F P+ ++ ++ F+ + F A+ Y
Sbjct: 77 HSQDPFMVFELLRS-CSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLY 135
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+M+ + ++Y + K C +LREG++VH+R +K G + VR ++ +Y
Sbjct: 136 -SRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGK 194
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
CGE +G AR +F+ MPE
Sbjct: 195 CGE-------------------------------LGDARRVFEEMPE------------- 210
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
DVV+ MI Y+ G V A F R+ ++ V W ++
Sbjct: 211 -------------------DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMID 251
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
+VR ++ L F M + +PNE +++ VL+AC+ +G ++IG+W+HSY++K I+
Sbjct: 252 GFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIEL 311
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
++ + +L+ MY++CG +D A+ VFD M +++V+++N+MI G M+G+ +A+E+F M
Sbjct: 312 NLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMI 371
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
R P + TF+ VL+AC+H G+V G+ F M R Y +EP++EHYGCMVDLLGR G +
Sbjct: 372 GRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRL 431
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ +L+ + M + G LLSAC H N ELG+ VA+ L + D G YVLLS++Y
Sbjct: 432 EEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVY 491
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVY 617
AS GKW E +R MKE ++K G S + E ++ + RK +Y
Sbjct: 492 ASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIY 544
>gi|296086392|emb|CBI31981.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 296/554 (53%), Gaps = 41/554 (7%)
Query: 35 WANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASR 94
W+ PK+ T + ++ L LESC+ E Q+H ++ +GL F S+
Sbjct: 16 WSLHHFPKYYSTAPEDQSLISL-------LESCTQTSEICQVHGSMVKTGLVNVPFTLSK 68
Query: 95 VLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE 154
+L +S+ + F+ I P+ FM NT+++ + + + P A ++ + A+ +
Sbjct: 69 LL---ASSIQDTDYAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAF-VVFKGLRAQQMI 124
Query: 155 HNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKV 214
+ ++F K CA + G+ +H +V+ G L V+N+L+H Y VCG + DA ++
Sbjct: 125 LDQFSFIPTLKACARELAYETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCGRIGDAHQL 184
Query: 215 FEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
F++ P P+ D+ +WN+++ GY+ V
Sbjct: 185 FDEIP------------------------------PKIDLVSWNTLLGGYLQVPHPTMVT 214
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
LF M +D+ +ID YA G + F ++ ++VV WN L+ Y + E
Sbjct: 215 CLFGEMCRKDLNVATALIDMYANAGFIDLGHKIFYQVPKKDVVLWNCLIDGYAKSDLLQE 274
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L L M R KPN ++L+ +L+ACA G +G I +Y+++ +I D +L T+L+
Sbjct: 275 SLSLLQLMKREQVKPNSSTLVGLLSACAAAGASSVGLCISNYVEEEQIALDAVLGTALVD 334
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MY KCG ++ A +VF+ M K+V SW +MI GYG+HGQ + A+ +F ME G PN+ T
Sbjct: 335 MYCKCGFLEKAIDVFERMEIKDVKSWTAMISGYGVHGQAKNAIMIFHRMEVEGYRPNEVT 394
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
F+ VL+AC+H GMV+EG + + M R Y PKVEHYGCM+DLLGRAGL+ ++ L+ L
Sbjct: 395 FLAVLNACSHGGMVVEGISFLEKMVREYGFSPKVEHYGCMIDLLGRAGLLEEAHNLIKSL 454
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
P+E W ALL+AC + N +LG+ V + L+E+ P +LLS+ YA G+ +
Sbjct: 455 PIEGDATGWRALLAACRVYGNVDLGECVKRVLLEIFDEHPTDSILLSSTYAIAGRLPDYT 514
Query: 575 NLRRIMKEKELEKA 588
++ I +EK +++A
Sbjct: 515 RMQEIKEEKMMKEA 528
>gi|354805213|gb|AER41630.1| CRR4 [Oryza nivara]
Length = 748
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 267/511 (52%), Gaps = 70/511 (13%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC------- 205
V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y C
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGVG 166
Query: 206 ---------------------------GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
G+ A FE P ++V+WN+++ G+ + +
Sbjct: 167 AARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGD 226
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ AR +FD MP R+ +WN MISGY GD+EAA +FD M +DVVSW M+ YAKI
Sbjct: 227 MVTARAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKI 286
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD-RMIRGDAKPNEASLMSV 357
G++ +A FD M ++N+VSWN ++ Y Y E LR F M+ G +P+EA+L+SV
Sbjct: 287 GDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSV 346
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
++ACA +G ++ WI S+I K I V L +L+ M+AKCG + A+++F M + +
Sbjct: 347 VSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCI 406
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
++W +MI G+ +G AL ++ M + G +D FI L+AC H G++ EGW F+
Sbjct: 407 ITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNE 466
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M Y I+P++EHYGCMVDLLGRA E
Sbjct: 467 MVERYNIQPRMEHYGCMVDLLGRA-----------------------------------E 491
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
L + V++ + ELEP + VL+SN A EG+WD V + R M+ +EK GSS + G
Sbjct: 492 LIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVG 551
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E + ++ R+ +Y + + A M+
Sbjct: 552 SEVHEFLAKDTRHKRRKEIYETVDGLMALMR 582
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 272/494 (55%), Gaps = 43/494 (8%)
Query: 150 AKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC--GE 207
+K+V+ + LL + R++ + K++H+ ++ LD F +I +++V +
Sbjct: 4 SKYVKASQRCLSLLEQC----RTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNAD 59
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD------FMPERDIFTW---- 257
+ A K+F P WN++I +V+ E A L+ F+P F++
Sbjct: 60 ISHAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRA 119
Query: 258 ---------------------------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
N +I Y + +EAA LFD+ RDV++W
Sbjct: 120 CTDNSPVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTA 179
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+I+GY K G+V AR FD+M RN VSW+ ++ YV + E L LF+ + +PN
Sbjct: 180 LINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPN 239
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
A ++ LTAC+ +G +D G+WIH+Y+ + + D +L T+L+ MYAKCG +++A +VF+
Sbjct: 240 HAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFE 299
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M +K+ ++ S+I G HGQ A+++F M+ PN+ TFICVLSAC+ G+V E
Sbjct: 300 KMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDE 359
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F+ M +Y IEP V+HYGCMVDLLGRAGL+ +++ LV ++PME + GALL++C
Sbjct: 360 GLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSC 419
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H + ELGK + L+E G +VLLSN+YAS +WD V +R+ M K+++K G
Sbjct: 420 RVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPG 479
Query: 591 SSLVHPGEFASESI 604
S + SE I
Sbjct: 480 CSSIEIDGSVSEFI 493
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 210/436 (48%), Gaps = 45/436 (10%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLF 112
V S L LE C T+ + Q+H+ L+VS D FAA +++ S ++ +S +
Sbjct: 7 VKASQRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKL 66
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F + F+ NTI++ F+ N+ ALS Y + F+ +N YTF + + C
Sbjct: 67 FLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNN-YTFSFVLRACTDNSP 125
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ G HA+++K G+E FV N LIH+Y+ V ARK+F+ D++TW ++I+G
Sbjct: 126 V--GLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALING 183
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD---LMPFR------ 283
YVK+ V FARELFD MPER+ +W++MI+GYV +G A LF+ L R
Sbjct: 184 YVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGI 243
Query: 284 ------------------------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
D V ++D YAK G + A + F++M
Sbjct: 244 VGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPD 303
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
++ ++ L++ + ++LF RM PNE + + VL+AC+ MG++D G I
Sbjct: 304 KDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRI 363
Query: 374 HSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHG 431
+ + I+P V ++ + + G+++ A+ + M E + +++ +HG
Sbjct: 364 FNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHG 423
Query: 432 QGEKALEMFMEMEKRG 447
E E + +RG
Sbjct: 424 DVELGKETVESLVERG 439
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 306/542 (56%), Gaps = 13/542 (2%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C++V H Q+H+ + +G+S D +L L + + V + FF + +
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD-LYSKCADVETAHKFFLTTETEN 427
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N ++ ++ L++ + + + M + N +T+P + + C + +L G+++H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP-NQFTYPSILRTCTSLGALYLGEQIH 486
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
++K GF+L+++V + LI MY+ G++ A ++ P D+V+W +MI GYV++
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 241 FARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMI 292
A +LF+ M R I + S IS + + + + D+ N +I
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YA+ G + A F+++ +N +SWN L++ + + E L++F RM+R +A+ N
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMF 666
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ S ++A A++ I GQ IHS + K + +S SL+++YAK G + A F++M
Sbjct: 667 TYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDM 726
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+E+NV+SWN+MI GY HG G +AL +F EM+ G PN TF+ VLSAC+H G+V EG
Sbjct: 727 SERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGL 786
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF+ M +I+ + PK EHY C+VDLLGRAG + + E + ++P+ A +W LLSAC
Sbjct: 787 DYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVI 846
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N E+G+ A HL+ELEP D YVL+SNIYA +W + R++MK++ ++K G S
Sbjct: 847 HKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRS 906
Query: 593 LV 594
+
Sbjct: 907 WI 908
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 205/441 (46%), Gaps = 26/441 (5%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+V FD F N ++ F+ F + +M+A+ + N YTF + K C
Sbjct: 112 AVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLF-RRMLAEGITPNGYTFAGVLKACV 170
Query: 169 GIR-SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
G + K+VH+R GF+ V N LI +YS G + A+KVF + D+VTW
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLFDLMPFR 283
+MI G +N A LF M +IF +S++S + E L L
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL---- 286
Query: 284 DVVSW---------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
V+ W N ++ Y++ + SA F M R+ VS+N L++ V+
Sbjct: 287 -VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L LF +M R KP+ ++ S+L+ACA++G + G +HS+ K + D++L SLL
Sbjct: 346 ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD 405
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
+Y+KC ++ A F +N+V WN M++ YG + E+F +M+ G PN T
Sbjct: 406 LYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFT 465
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVS 512
+ +L CT G + G + + K ++ Y C ++D+ + G + + ++
Sbjct: 466 YPSILRTCTSLGALYLGE---QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILR 522
Query: 513 KLPMEAGPALWGALLSACSTH 533
+LP E W A+++ H
Sbjct: 523 RLP-EDDVVSWTAMIAGYVQH 542
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 158/342 (46%), Gaps = 27/342 (7%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M + V N+ + L + C SL E ++H RI K GF+ + + +SL+ Y G+
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
A KVF++ + +WN MI +V + LF M I +GY
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP-----NGYTFA 163
Query: 268 GDMEAANG------------------LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
G ++A G FD P + N +ID Y+K G + SA+ F+
Sbjct: 164 GVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP----LVANLLIDLYSKNGYIESAKKVFN 219
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
+CM+++V+W +++ + E + LF M + P L SVL+A + + ++
Sbjct: 220 CICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFEL 279
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G+ +H + K + + L+ +Y++ + A +F M ++ VS+NS+I G
Sbjct: 280 GEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ 339
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
G ++ALE+F +M++ P+ T +LSAC G + +G
Sbjct: 340 QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 15/248 (6%)
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+ ++D Y + G+ A FD R+V SWN ++ ++V K + LF RM+
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 349 PNEASLMSVLTACANMGV-IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
PN + VL AC + + + +HS L++ L+ +Y+K G ++ A+
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ + K++V+W +MI G +G E+A+ +F +M P VLSA T +
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 468 VLEGWWYFDLMQRIYKIEPK----VEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPA 521
F+L ++++ + K E Y C +V L R+ + +E + S + G +
Sbjct: 277 -------FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Query: 522 LWGALLSA 529
+ +L+S
Sbjct: 330 -YNSLISG 336
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 24/242 (9%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
++L + M + N + + +L C G + +H I K + LL SL+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y + G A VFD + ++V SWN MI + + +F M G TPN TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG---------CMVDLLGRAGLMRD 506
VL AC + + ++ + +YG ++DL + G +
Sbjct: 163 AGVLKACVGGDIAF---------NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIES 213
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV--AQHLMELEPRDPGPYVLLSNIY 564
++++ + + M+ W A++S S + E ++ H E+ P PYVL S +
Sbjct: 214 AKKVFNCICMK-DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT---PYVLSSVLS 269
Query: 565 AS 566
AS
Sbjct: 270 AS 271
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 218/342 (63%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
+++ N ++ Y G+M A LF+ MP RDVV+WN MI K G+ A + F RM
Sbjct: 162 NLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMP 221
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
RNV SW ++A YV+C E + LF +M K NE ++++VL ACA++G +D+G
Sbjct: 222 ERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 281
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
IH Y + K +V +S +L+ MY KCG ++ A VF+ M E+ VVSW++MI G MHG+
Sbjct: 282 IHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGR 341
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
E+AL +F +M + G PN TFI +L AC+H G++ EG +F M R Y I P++EHYG
Sbjct: 342 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYG 401
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CMVDLL RAGL+ ++ E + +PM+ +WGALL AC H N E+ + +HL+EL+P
Sbjct: 402 CMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPL 461
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ G YV+LSNIYA G+W++ +R+ MK+++++K G S +
Sbjct: 462 NDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSI 503
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 191/448 (42%), Gaps = 88/448 (19%)
Query: 67 CSTVKEFHQIHTQL-LVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE---PDAF 122
C+ FH V ++F + LK L S + +LF+ Q PD F
Sbjct: 70 CAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTF 129
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
C++++++ C + L G+ +H
Sbjct: 130 TCSSVLRA------------------------------------CLNLLDLSNGRILHGV 153
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
+ K GF +L+++N ++H+Y+ CGE+ +AR +FE P D+VTWN MI +K + A
Sbjct: 154 VEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGA 213
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP--------------------- 281
+LF MPER++ +W SMI+GYV G + A LF M
Sbjct: 214 YDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADL 273
Query: 282 ------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL- 322
R+V N +ID Y K G + A F+ M R VVSW+ +
Sbjct: 274 GALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMI 333
Query: 323 --LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQK 379
LA++ R + E LRLF M + +PN + + +L AC++MG+I G ++ S +
Sbjct: 334 GGLAMHGRAE---EALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD 390
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALE 438
I P + ++ + ++ G++ A NM K N V W +++ +H E A E
Sbjct: 391 YGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEE 450
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAG 466
+ + P ND ++ + + AG
Sbjct: 451 AIKHLLELDPL-NDGYYVVLSNIYAEAG 477
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 243/414 (58%), Gaps = 16/414 (3%)
Query: 196 NSLIHMYSVCGEVLDARKVFE--------------DGPVWDLVTWNSMIDGYVKNREVGF 241
N+LI Y G DA+++F+ G ++V+WNSM+ Y+K +V
Sbjct: 198 NTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCS 257
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNV 301
AR LF+ MP++D+ +WN+MISGY DM+ + LF MP D VSWN +I G+ + G
Sbjct: 258 ARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEA 317
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDRM R +SWN +++ Y + +Y ++LF +M+ P+ + SVL AC
Sbjct: 318 EHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAAC 377
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSW 420
A++ ++ +G IH ++K + PD +S +L+TMY++CG ++ A +F M T+K++VSW
Sbjct: 378 ASIPMLGLGAQIHQLVEKSFV-PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSW 436
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N++I Y HG+ KAL++F EM + P TF+ +LSAC +AG+V EG FD M
Sbjct: 437 NALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVH 496
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y I ++EHY +V+L+GR G + D+ E+++ +PM ++WGA L AC+ N L +
Sbjct: 497 EYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQ 556
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ L + P PYVL+ N++A EGKW +R M+ + + K G S +
Sbjct: 557 MAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWI 610
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 178/417 (42%), Gaps = 78/417 (18%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---REVGFARELFDFMPER 252
NSL+ + + AR+ F+ PV D V+WN+++ Y + + AR LFD MP+R
Sbjct: 35 NSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQR 94
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+ TWN+++ Y G M+ A LFD MP R+ SWN M+ G+ G V A + FD M
Sbjct: 95 DVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMP 154
Query: 313 MRNVVS------------------------------------WNILLALYVRCKDYCECL 336
++ S +N L+ Y + + +
Sbjct: 155 AKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAK 214
Query: 337 RLFDRMIRGDAKPN-------EASLMS-------------VLTACA---NMGVIDIGQW- 372
RLFD + +G + N E +++S V +A A M D+ W
Sbjct: 215 RLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWN 274
Query: 373 --IHSYIQKCRIK-----------PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
I Y Q +K PD + ++ + + G + AR FD M E+ +S
Sbjct: 275 TMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTIS 334
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN+MI GY +G ++++F +M + G P+ TF VL+AC M+ G L++
Sbjct: 335 WNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVE 394
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
+ + P ++ + R G + D+E + ++ + W AL+ H +
Sbjct: 395 KSFV--PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRA 449
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 191/433 (44%), Gaps = 67/433 (15%)
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G AR++F+ P +VTWNS++ G + + ARE FD MP RD +WN++++ Y
Sbjct: 13 AGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAY 72
Query: 265 V---DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ AA LFD MP RDVV+WN ++ YA+ G + AR FD M RN SWN
Sbjct: 73 SASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNT 132
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG---------------- 365
++ + + L +FD M D+ ASL ++++ G
Sbjct: 133 MVTGFFAAGQVVKALDVFDAMPAKDS----ASLSTMVSGFTKNGMLHEAEELLTKRLSVT 188
Query: 366 ------------------------------VIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+I GQ+ H+ +++ + +V+ S++
Sbjct: 189 DMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMIC 248
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y K G + AR +F+ M +K++VSWN+MI GY +++ ++F EM P P+ ++
Sbjct: 249 YIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEM----PDPDTVSW 304
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
++ G +FD M I + M+ + G S +L SK+
Sbjct: 305 NLIIQGFMQKGEAEHARGFFDRMPERGTIS-----WNTMISGYEKNGNYISSVKLFSKM- 358
Query: 516 MEAGP----ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+E G + ++L+AC++ LG + Q + + D L +Y+ G +
Sbjct: 359 LEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEKSFVPDTAISNALITMYSRCGALN 418
Query: 572 EVENLRRIMKEKE 584
+ E + + M K+
Sbjct: 419 DAEAIFKQMHTKK 431
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 150/354 (42%), Gaps = 55/354 (15%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
N + ++ G AR LFD +P R + TWNS+++G D AA FD MP RD V
Sbjct: 4 NRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAV 63
Query: 287 SWNCMIDGYAKI---GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR-- 341
SWN ++ Y+ ++ +AR FD M R+VV+WN LL Y R E RLFD
Sbjct: 64 SWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMP 123
Query: 342 ---------MIRG--------------DAKP--NEASLMSVLTACANMGVI-DIGQWIHS 375
M+ G DA P + ASL ++++ G++ + + +
Sbjct: 124 QRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTK 183
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD---------NMT-----EKNVVSWN 421
+ + V +L+ Y + G A+ +FD NM E+NVVSWN
Sbjct: 184 RLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWN 243
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
SM++ Y G A +F EM P + ++ ++S T A + E F M
Sbjct: 244 SMMICYIKAGDVCSARALFNEM----PDKDLVSWNTMISGYTQASDMKESEKLFWEMP-- 297
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+P + ++ + G + ++P E G W ++S + N
Sbjct: 298 ---DPDTVSWNLIIQGFMQKGEAEHARGFFDRMP-ERGTISWNTMISGYEKNGN 347
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + E NT++ + + ++ + KM+ + +TF + CA I
Sbjct: 323 FFDRMPERGTISWNTMISGYEKNGNYISSVKLF-SKMLEVGEIPDRHTFSSVLAACASIP 381
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV-WDLVTWNSMI 230
L G ++H ++V+ F D + N+LI MYS CG + DA +F+ DLV+WN++I
Sbjct: 382 MLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALI 440
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM 280
Y + A +LF M + T+ S++S V+ G + +FD M
Sbjct: 441 GCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTM 494
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 265/438 (60%), Gaps = 14/438 (3%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C +R L++G+ +HA I FE DL + N +++MY+ CG + +A+ +F+ P D+V+W
Sbjct: 115 CTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSW 174
Query: 227 NSMIDGYVKNREVGFARELF------DFMPERDIFTWNSMI--SGYVDVGDMEAANGLFD 278
+I GY ++ + A LF F P FT +S++ SG F
Sbjct: 175 TVLISGYSQSGQASEALALFPKMLHLGFQPNE--FTLSSLLKASGTGPSDHHGRQLHAFS 232
Query: 279 LMPFRD--VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
L D V + ++D YA+ ++ A+ F+ + +NVVSWN L+A + R + +
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
RLF +M+R +P + SVL ACA+ G ++ G+W+H+++ K +P + +L+ MY
Sbjct: 293 RLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMY 351
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
AK G + A+ VF + ++++VSWNS+I GY HG G +AL++F +M K PN+ TF+
Sbjct: 352 AKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFL 411
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VL+AC+H+G++ EG +YF+LM++ +KIE +V H+ +VDLLGRAG + ++ + + ++P+
Sbjct: 412 SVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 470
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
+ A+WGALL AC H N +LG A+ + EL+P D GP+VLLSNIYAS G+ + +
Sbjct: 471 KPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKV 530
Query: 577 RRIMKEKELEKAVGSSLV 594
R++MKE ++K S V
Sbjct: 531 RKMMKESGVKKEPACSWV 548
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 195/413 (47%), Gaps = 17/413 (4%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P L +L K +K+ IH + S D + +L + S+ +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILN-MYAKCGSLEEAQD 161
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + D ++ + AL+ + KM+ + N +T L K
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALF-PKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
S G+++HA +K G+++++ V +SL+ MY+ + +A+ +F ++V+WN++I
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMI----SGYVDVGDMEAANGLFD-LMPF 282
G+ + E LF M + FT++S++ SG ++ G A+ + P
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPI 340
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+ N +ID YAK G++ A+ F R+ +++VSWN +++ Y + E L+LF++M
Sbjct: 341 AYI--GNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 398
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
++ +PNE + +SVLTAC++ G++D GQ+ ++K +I+ V +++ + + G +
Sbjct: 399 LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRL 458
Query: 403 DLARNVFDNMTEKNVVS-WNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPN 451
+ A + M K + W +++ MH G A E E++ P+
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPH 511
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 50/289 (17%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L + D + G +P +L C + + G+ IH++IQ + D++L +L M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAKCG ++ A+++FD M K++VSW +I GY GQ +AL +F +M G PN+ T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 456 ICVLSA-----CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
+L A H G L F L Y + V ++D+ R MR+++ +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHA---FSLK---YGYDMNVHVGSSLLDMYARWAHMREAKVI 263
Query: 511 VSKLPMEAGPALWGALLS----------------------------------ACSTHSNS 536
+ L + W AL++ AC++ +
Sbjct: 264 FNSLAAK-NVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSL 322
Query: 537 ELGKIVAQHLMELEPRDPGPYV--LLSNIYASEGKWDEVENL-RRIMKE 582
E GK V H+++ P Y+ L ++YA G + + + RR++K+
Sbjct: 323 EQGKWVHAHVIK-SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ 370
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/407 (39%), Positives = 239/407 (58%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D ++I+ Y G++L AR++ P ++ +MI+GY+++ + A E+F
Sbjct: 292 EKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQ 351
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+ RD WNSMI+GY G + A LF M +D+VSWN MI YA+ G + A F
Sbjct: 352 ISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMF 411
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ M RNVVSWN L+ YV+ Y E L F M + KP++ +++ L A AN+ ++
Sbjct: 412 NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALN 471
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+G +H K D+ + ++LTMYAK G + A NVF + K+VVSWNS+I GY
Sbjct: 472 VGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYA 531
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
++G G++A+E+F M RG P++ TF +LSAC H G V +G F M Y I+P+
Sbjct: 532 LNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQS 591
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHY C+++LLGR G + ++ E+V + + +WGALL AC H N EL K A+ L+
Sbjct: 592 EHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLA 651
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
LEP++ YVLLSN++A G+WD VE +R +MKE + EK G S +
Sbjct: 652 LEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIE 698
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 162/313 (51%), Gaps = 27/313 (8%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D RN+LI Y+ +A+K+F++ V ++V+WNS++ GY KN ++ + F+ M
Sbjct: 139 DTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMG 198
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ER++ +WN M+ GYV VGD+++A F +P +VVSW M+ G+A G +T ARN F+
Sbjct: 199 ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNE 258
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL------------MSVL 358
M +N+VSWN ++ YVR + +LF M D+ A + +L
Sbjct: 259 MPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREIL 318
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARN 407
+ I+ Y+Q R+ D + S++T YA CG D A
Sbjct: 319 NLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALR 378
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F M K++VSWN+MI Y GQ +KALEMF EM++R N ++ +++ G+
Sbjct: 379 LFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQER----NVVSWNSLITGYVQNGL 434
Query: 468 VLEGWWYFDLMQR 480
E F LM++
Sbjct: 435 YFEALNCFILMKQ 447
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 207/398 (52%), Gaps = 22/398 (5%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++ NS+I Y+ G + +AR++F+ P +LV+WNSMI GY+ N V A LFD
Sbjct: 43 ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDR 102
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNC 307
M +RDI++W MI+ Y +G++E A LF+L+P + D V N +I GYAK A+
Sbjct: 103 MFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKL 162
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD M ++NVVSWN +L+ Y + L+ F+ M + N S ++ +G +
Sbjct: 163 FDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAM----GERNVVSWNLMVDGYVGVGDL 218
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D W+ + +K P+V+ ++L+ +A G M ARN+F+ M KN+VSWN+MI Y
Sbjct: 219 D-SAWM--FFKKIPT-PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAY 274
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
Q + A ++FMEM P + ++ +++ G +L+ +LM YK
Sbjct: 275 VRENQIDDAYKLFMEM----PEKDSVSWTAMINGYVRVGKLLQAREILNLMP--YK---N 325
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+ M++ ++G M ++ E+ S++ + W ++++ + ++ + Q
Sbjct: 326 IAAQTAMINGYLQSGRMDEANEIFSQISVR-DSVCWNSMITGYAHCGRTDEALRLFQ--- 381
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
E+ +D + + YA G+ D+ + M+E+ +
Sbjct: 382 EMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNV 419
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ +QE + N+++ ++ F AL+ + M + + + T + A + +
Sbjct: 411 FNEMQERNVVSWNSLITGYVQNGLYFEALNCFI-LMKQQGEKPDQTTIVCCLRASANLAA 469
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G ++H +K GF DLFV+N+++ MY+ G V +A VF + D+V+WNS+I G
Sbjct: 470 LNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAG 529
Query: 233 YVKNREVGFARELFDFMPERDIF----TWNSMIS-----GYVDVG--DMEAANGLFDLMP 281
Y N A ELF+ MP R I T+ ++S G+VD G ++ + + P
Sbjct: 530 YALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKP 589
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ + C+I+ ++G + A M+ V S I AL C+
Sbjct: 590 QSE--HYACVINLLGRVGRLEEAVEIVQ--GMKTVSSAKIWGALLWACR 634
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 257/474 (54%), Gaps = 46/474 (9%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
P L + A RSL H + G E+D FV +L+ Y+ CG V DAR+VF+
Sbjct: 71 ALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVEDARRVFDGM 130
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFM------PERDIF---------TWN----- 258
P DLV W M+D Y + R A LF M P++ I T N
Sbjct: 131 PDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCAHTRNLRFGK 190
Query: 259 -------------------SMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
++++ Y DME A L++ + +++V M+ GYAK G
Sbjct: 191 AIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNG 250
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V A + F+ M ++VVSW+ ++A Y E L LF M R KP+E +++SV++
Sbjct: 251 KVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVIS 310
Query: 360 ACANMGVIDIGQWIHSYIQK---CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
ACAN+G ++ + IHS+++ C+I P + +L+ M++KCG + LA +VF+ M +KN
Sbjct: 311 ACANVGALEKARCIHSFVENHSMCKILP---IGNALIDMFSKCGSLTLALDVFNAMPQKN 367
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
VV+W S+I MHG G AL +F M+ G PN TF+ +L AC HAG+V EG F
Sbjct: 368 VVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFK 427
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
+M + Y+IEP EHYGCMVDLLGRA L+ + +L+ + + +WG+LL+AC H +
Sbjct: 428 IMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDL 487
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV-ENLRRIMKEKELEKAV 589
ELG A+ ++EL+P G VLLSNIYA G W++V E L + EK+ E A
Sbjct: 488 ELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEGLSKKDYEKKKELAA 541
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 177/392 (45%), Gaps = 43/392 (10%)
Query: 84 GLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF 143
G D F + +++ + V + FDG+ + D ++ + + AL
Sbjct: 99 GAEVDGFVGTALVRAY-AACGRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLL 157
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
++ ++ V +L CA R+LR GK +H+ ++ +D V +L++MY+
Sbjct: 158 FHSMKRSRVVPDQVIIATVL-STCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYA 216
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISG 263
C ++ A K++ ++V +M+ GY KN +V A +F+ MP +D+ +W++MI+G
Sbjct: 217 SCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAG 276
Query: 264 YVDVGD-MEAANGLFDL---------MPFRDVVS-------------------------- 287
Y + MEA N D+ + V+S
Sbjct: 277 YAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKI 336
Query: 288 ---WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
N +ID ++K G++T A + F+ M +NVV+W ++ D L LF+ M
Sbjct: 337 LPIGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKS 396
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+PN + + +L AC + G+++ G+ + +Q+ RI+P ++ + + ++
Sbjct: 397 EGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLG 456
Query: 404 LARNVFDNMTEK-NVVSWNSMIMGYGMHGQGE 434
A ++ +M + NVV W S++ MHG E
Sbjct: 457 QAADLIQSMHLRPNVVIWGSLLAACRMHGDLE 488
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
G P +L S+L A A + H + + D + T+L+ YA CG ++
Sbjct: 63 GLPAPGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVED 122
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
AR VFD M ++++V+W M+ Y E+AL +F M++ P+ VLS C H
Sbjct: 123 ARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCAH 182
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/388 (39%), Positives = 242/388 (62%), Gaps = 8/388 (2%)
Query: 247 DFMPERDIFTW---NSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVT 302
D +P + F+ + ISG +G EA + M F D++ ++D YAK G V
Sbjct: 25 DVLPSKTSFSLILRSCAISGEAQLG--EAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVE 82
Query: 303 SARNCFDRMCMRNV--VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
ARN FD M RN V+WN +++ YV+C ++ + +F +M + KP E +++S+L+A
Sbjct: 83 EARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSA 142
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
CA++G +D+G+WIH YI+ R+K DV+L +L+ MY KCG ++ A +VF ++ KN+ W
Sbjct: 143 CAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCW 202
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
NS+I+G GM+G+GE+A+ F+ MEK G P+ TF+ +LS C+H+G++ G YF M
Sbjct: 203 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLG 262
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
+Y +EP VEHYGCMVDLLGRAG ++++ EL+ +PM+ + G+LL AC H +++LG+
Sbjct: 263 VYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGE 322
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
V Q L+EL+P D G YV LSN+YAS +WD+V R++M ++ + K G S +
Sbjct: 323 QVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIV 382
Query: 601 SESIVENCPPHRKCIVYSMLGEIGAQMK 628
E + + + + + L EI ++K
Sbjct: 383 HEFVAGDTSHPQFTQINAFLDEIAKELK 410
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 8/228 (3%)
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
C D+ L + M+R D P++ S +L +CA G +G+ H I K + D++L
Sbjct: 11 CPDF---LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMIL 67
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEK--NVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
T LL YAK G ++ ARN+FDNMTE+ N V+WN+MI Y G+ A+ MF +M+
Sbjct: 68 QTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSE 127
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
P + T + +LSAC H G + G W + R +++ V ++D+ + G +
Sbjct: 128 NVKPTEVTMVSLLSACAHLGALDMGEWIHGYI-RTKRLKIDVVLGNALIDMYCKCGALEA 186
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
+ ++ L + W +++ + E I A +ME E P
Sbjct: 187 AIDVFHGLSRK-NIFCWNSIIVGLGMNGRGEEA-IAAFIVMEKEGIKP 232
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 17/295 (5%)
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
+Y M+ V + +F L+ + CA + G+ H +I+K GFE D+ ++ L+ Y+
Sbjct: 17 FYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA 76
Query: 204 VCGEVLDARKVFEDGPVW--DLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTW 257
G V +AR +F++ + VTWN+MI YV+ E G A +F M ++ T
Sbjct: 77 KHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTM 136
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
S++S +G ++ + + + DVV N +ID Y K G + +A + F +
Sbjct: 137 VSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSR 196
Query: 314 RNVVSWN-ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ- 371
+N+ WN I++ L + + E + F M + KP+ + + +L+ C++ G++ GQ
Sbjct: 197 KNIFCWNSIIVGLGMNGRGE-EAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQR 255
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ + ++P V ++ + + G + A + M K NSM++G
Sbjct: 256 YFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLG 306
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 20/267 (7%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE-- 118
L SC+ E H Q++ G D + +L V + FD + E
Sbjct: 37 LRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLD-FYAKHGYVEEARNLFDNMTERN 95
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
++ NT++ +++ + FG +++M ++ V+ T L CA + +L G+
Sbjct: 96 SNSVTWNTMISAYVQCGE-FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEW 154
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H I ++D+ + N+LI MY CG + A VF ++ WNS+I G N
Sbjct: 155 IHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGR 214
Query: 239 VGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAAN-------GLFDLMPFRDVVS 287
A F M + I T+ ++SG G + A G++ L P V
Sbjct: 215 GEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEP--GVEH 272
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMR 314
+ CM+D + G + A M M+
Sbjct: 273 YGCMVDLLGRAGYLKEALELIRAMPMK 299
>gi|357144887|ref|XP_003573448.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Brachypodium distachyon]
Length = 530
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 247/407 (60%), Gaps = 3/407 (0%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
L RNSL+ G++ AR +F+ PV D+V+WNSM+ G K + A ELF MPE
Sbjct: 122 LVSRNSLLASLLRSGDLPAARALFDQMPVRDVVSWNSMVAGLAKAGRLDCAIELFHQMPE 181
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R+ +WN+++ G + G + A F+ MP R VSW MI GYAK G+V +A + F+RM
Sbjct: 182 RNAASWNAVMCGLIAHGHLARAREWFEQMPVRSNVSWITMISGYAKAGDVQAAASLFERM 241
Query: 312 CMRN-VVSWNILLALYVRCKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACANMGVID 368
+N + +WN ++A Y + E + +F RM++ PNE + SV++AC+ +G +
Sbjct: 242 ENQNDLYAWNAMIACYGQNGCAREAISVFIRMLKPHICVLPNEKTFSSVISACSQLGNLR 301
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G W+ S++ I+ D L T+L+ +Y K G +D A +F + ++VVS+++MI+G G
Sbjct: 302 FGLWVESFMCSLGIELDDHLRTALVDLYTKSGRIDNAFKLFRGLRTRDVVSYSAMIVGCG 361
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
M+G+ +A+ +F EM PN TF+ +LSA HAG++ E F M Y I P +
Sbjct: 362 MNGKLSEAIGLFKEMSDAKIVPNAVTFVGLLSAYNHAGLMEEARACFAFMSSKYNIRPSM 421
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHY MVDLLGR+G + ++ +L+ K+PM+ ++WGALL AC H+N ELG++VA E
Sbjct: 422 EHYTIMVDLLGRSGKLDEAFQLIMKMPMQPHASVWGALLLACRLHTNVELGEMVASKCFE 481
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
L P + G Y+LL NIYA KWD+V++LR+ M E L K GSS V
Sbjct: 482 LAPGESGYYILLGNIYAQANKWDKVKSLRKTMMEMGLSKMPGSSWVQ 528
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N TF + C+ + +LR G V + + G ELD +R +L+ +Y+ G + +A K+F
Sbjct: 283 NEKTFSSVISACSQLGNLRFGLWVESFMCSLGIELDDHLRTALVDLYTKSGRIDNAFKLF 342
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDME 271
D+V++++MI G N ++ A LF M + I T+ ++S Y G ME
Sbjct: 343 RGLRTRDVVSYSAMIVGCGMNGKLSEAIGLFKEMSDAKIVPNAVTFVGLLSAYNHAGLME 402
Query: 272 AANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS-WNILL 323
A F M + + + M+D + G + A +M M+ S W LL
Sbjct: 403 EARACFAFMSSKYNIRPSMEHYTIMVDLLGRSGKLDEAFQLIMKMPMQPHASVWGALL 460
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 310/583 (53%), Gaps = 14/583 (2%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L+H ++Q ++ Q+H L+ +G + +F + ++ + + + ++ FD
Sbjct: 8 LAH-VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVN-MYSKCGELDHALKLFDT 65
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ + + + T M S L N F + M + F + CA + S+
Sbjct: 66 MPQRN-LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEM 124
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK++H +K G +LFV ++L MYS CG + DA KVFE+ P D V+W +MIDGY K
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 184
Query: 236 NREVGFARELFDFMPERDI-FTWNSMISGYVDVGDMEAA-------NGLFDLMPFRDVVS 287
E A F M + ++ + + S G ++A + + L D+
Sbjct: 185 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 244
Query: 288 WNCMIDGYAKIGNVTSARNCF--DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
N + D Y+K G++ SA N F D C RNVVS+ L+ YV + + L +F + R
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSEC-RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+PNE + S++ ACAN ++ G +H+ + K D +S+ L+ MY KCG+++ A
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 363
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
FD + + ++WNS++ +G HG G+ A+++F M RG PN TFI +L+ C+HA
Sbjct: 364 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 423
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V EG YF M + Y + P EHY C++DLLGRAG +++++E ++++P E W +
Sbjct: 424 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 483
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
L AC H + E+GK+ A+ L++LEP++ G VLLSNIYA+E +W++V ++R M++ +
Sbjct: 484 FLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNV 543
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+K G S V G E+ RK +Y L + Q+K
Sbjct: 544 KKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIK 586
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L V+ A + G+ +H+ + P L+ L+ MY+KCG +D A +FD M
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++N+VSW +MI G + + +A+ F M G P F + AC G + G
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
L + + I ++ + D+ + G M D+ ++ ++P + W A++ S
Sbjct: 127 QMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYS 183
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 237/373 (63%), Gaps = 2/373 (0%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D+F +++ Y +G + +A LFD MP RD+ +WN +I GYA+ G++ +A F++M
Sbjct: 116 DMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMP 175
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVIDIGQ 371
+RNV+SW L++ Y + Y + L +F + KPNE S+ SVL AC+ +G +DIG+
Sbjct: 176 VRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGK 235
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMH 430
I +Y + + +S ++L ++A+CG ++ A+ VFD + +++N+ SWN+MIMG +H
Sbjct: 236 RIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVH 295
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+ AL+++ +M R P+D TF+ +L ACTH GMV EG F+ M+ +++ PK+EH
Sbjct: 296 GRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEH 355
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGC+VDLLGRAG ++++ L+ +PM +WG LL ACS H N ELG++ A+ L +LE
Sbjct: 356 YGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLE 415
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P +PG YV+LSNIYA G W V LR++MK + K G S + G+ E IVE+
Sbjct: 416 PWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVEDRSH 475
Query: 611 HRKCIVYSMLGEI 623
+ +Y++L +I
Sbjct: 476 LKSGEIYALLHKI 488
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 201/428 (46%), Gaps = 58/428 (13%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ + QIH L +GL F ++L+ L + + FD I +P ++ N ++
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQ-----LPDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+F + P Y + M ++ N Y+F L CA + ++ G+ +H+ K GF
Sbjct: 56 TFSSIGHPHRCWLLYCQ-MCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFA 114
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
D+F +L+ MY+ G + AR++F++ PV D+ TWNS+I GY ++ + A ELF+ M
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 250 PERDIFTWNSMISGYVDVGDMEAANGLF-----------------DLMP----------- 281
P R++ +W ++ISGY G A +F ++P
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIG 234
Query: 282 ------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRM-CMRNVVSWNIL---LAL 325
F++ N +++ +A+ GN+ A+ FD + RN+ SWN + LA+
Sbjct: 235 KRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAV 294
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKP 384
+ RC D L+L+D+M+ +P++ + + +L AC + G++ G Q S K ++ P
Sbjct: 295 HGRCID---ALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAP 351
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMF 440
+ L+ + + G + A N+ NM + V W +++ HG GE A E
Sbjct: 352 KLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESL 411
Query: 441 MEMEKRGP 448
++E P
Sbjct: 412 FKLEPWNP 419
>gi|222636781|gb|EEE66913.1| hypothetical protein OsJ_23761 [Oryza sativa Japonica Group]
Length = 595
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 270/498 (54%), Gaps = 52/498 (10%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M A+ V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y CG
Sbjct: 1 MRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGG 60
Query: 208 VLD-----ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNS--- 259
AR+VF++ D+V+WNS++ Y+ + + A F+ MPER++ +WN+
Sbjct: 61 GGGGGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVA 120
Query: 260 --------MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
MISGY GD+EAA +FD M +DVVSW M+ YAKIG++ + FD M
Sbjct: 121 GNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTVNELFDHM 180
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFD-RMIRGDAKPNEASLMSVLTACANMGVIDIG 370
++N+VSWN ++ Y Y E LR F M+ G +P+EA+L+SV++ACA +G ++
Sbjct: 181 PVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYC 240
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
WI S+I K I V L +L+ M+AKCG + A ++F M + +++W +MI G+ +
Sbjct: 241 NWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCIITWTTMISGFAFN 300
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G AL ++ M + G +D FI L+AC H G++ EGW F+ M Y I+P++EH
Sbjct: 301 GLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQPRMEH 360
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCMVDLLGRA EL + V++ + ELE
Sbjct: 361 YGCMVDLLGRA-----------------------------------ELIEYVSKKITELE 385
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
P + VL+SN A EG+WD V + R M+ +EK GSS + G E + ++
Sbjct: 386 PFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVGSEVHEFLAKDTRH 445
Query: 611 HRKCIVYSMLGEIGAQMK 628
R+ +Y + + A M+
Sbjct: 446 KRRKEIYETVDGLMALMR 463
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 146/357 (40%), Gaps = 80/357 (22%)
Query: 76 IHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVL--FFDGIQEPDAFMCNTIMKSF 131
+H Q++ G D F + ++ C + FD + + D N+I+ +
Sbjct: 32 VHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGGVGAARQVFDEMVDRDVVSWNSIVGVY 91
Query: 132 LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD 191
+ D GA+ F+ V N V AG +
Sbjct: 92 MSSGDATGAMGFFEAMPERNVVSWN--------TVVAG---------------------N 122
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
N +I Y++ G+V AR VF+ D+V+W +M+ Y K ++ ELFD MP
Sbjct: 123 AVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTVNELFDHMPV 182
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLM----PFR-------DVVS------------W 288
+++ +WN+MI+GY + A F LM FR VVS W
Sbjct: 183 KNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNW 242
Query: 289 -----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV---R 328
N +ID +AK G+V A + F +M R +++W +++ +
Sbjct: 243 ISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCIITWTTMISGFAFNGL 302
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIKP 384
C+D L +++ M R + ++ ++ L ACA+ G++ G I + +++ I+P
Sbjct: 303 CRD---ALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQP 356
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 299/552 (54%), Gaps = 33/552 (5%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C++V + Q+H+ LL +G+S D +L L + + F+ +
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD-LYVKCGDIETAHDIFNLGDRTN 310
Query: 121 AFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N ++ ++ ++D A SF + +M A + N +T+P + + C + G+++
Sbjct: 311 VVLWNLMLVAYGQISDL--AKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI 368
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H+ +K GFE D++V LI MYS G + ARK+ E D+V+W SMI GYV++
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQH--- 425
Query: 240 GFARE-LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR--------------- 283
F E L F +D W ++G AA+ + R
Sbjct: 426 DFCEEALATFKEMQDCGVWPD------NIGLASAASACAGIKAMRQGLQIHARVYVSGYA 479
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
D+ WN +++ YA+ G A + F + ++ ++WN L++ + + + Y + L +F +M
Sbjct: 480 ADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKM 539
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ AK N + +S ++A AN+ I G+ +H K + ++ +L+++Y KCG +
Sbjct: 540 GQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSI 599
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ A+ +F M+ +N VSWN++I HG+G +AL++F +M++ G PND TFI VL+AC
Sbjct: 600 EDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 659
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+H G+V EG YF M +Y + P +HY C+VD+LGRAG + + V ++P+ A +
Sbjct: 660 SHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMI 719
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
W LLSAC H N E+G++ A+HL+ELEP D YVLLSN YA GKW + +R++MK+
Sbjct: 720 WRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKD 779
Query: 583 KELEKAVGSSLV 594
+ + K G S +
Sbjct: 780 RGIRKEPGRSWI 791
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 185/396 (46%), Gaps = 16/396 (4%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y +M V Y + C + +G+ +HA++ K F + FV N+LI +Y
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSM 260
G A +VF D D VT+N++I G+ + A ++FD M D T S+
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251
Query: 261 ISGYVDVGDMEAANGLFDL-----MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
++ VGD++ L M F D ++ ++D Y K G++ +A + F+ N
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSF-DYITEGSLLDLYVKCGDIETAHDIFNLGDRTN 310
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV WN++L Y + D + +F +M PN+ + +L C G I++G+ IHS
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHS 370
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
K + D+ +S L+ MY+K G +D AR + + + +++VVSW SMI GY H E+
Sbjct: 371 LSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEE 430
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY--KIEPKVEHYGC 493
AL F EM+ G P++ SAC + +G + R+Y + +
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG---LQIHARVYVSGYAADISIWNT 487
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+V+L R G ++ L ++ + W L+S
Sbjct: 488 LVNLYARCGRSEEAFSLFREIEHK-DEITWNGLISG 522
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 175/358 (48%), Gaps = 35/358 (9%)
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++HA V G D + N LI +Y+ G V AR+VF++ D V+W +M+ GY ++
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS- 122
Query: 238 EVGFARELFDFMPERDIFTWNSMI-SGYV--------DVGDMEAANGLFDLMPFR----- 283
G +E F + W ++I + YV G + A + ++
Sbjct: 123 --GLGKEAFRLYSQ---MHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS 177
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC-LRLFDRM 342
+ N +I Y G+ A F M + V++N L++ + +C + EC L++FD M
Sbjct: 178 ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC-GHGECALQIFDEM 236
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+P+ ++ S+L ACA++G + G+ +HSY+ K + D + SLL +Y KCG +
Sbjct: 237 QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDI 296
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ A ++F+ NVV WN M++ YG K+ E+F +M+ G PN T+ C+L C
Sbjct: 297 ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTC 356
Query: 463 THAGMVLEGWWYFDLMQRIYKI------EPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
T G + +L ++I+ + E + G ++D+ + G + + +++ L
Sbjct: 357 TCTGQI-------ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEML 407
>gi|359491277|ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g22760-like [Vitis vinifera]
Length = 583
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/390 (40%), Positives = 246/390 (63%), Gaps = 6/390 (1%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G++ A++VF++ P D+++WNSM Y ++ ++ A LF MPER+ +WN+MI+GYV
Sbjct: 170 GDLAVAQRVFDEIPQKDVISWNSMFSXYARSGDLEKASSLFQQMPERNFASWNAMINGYV 229
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+ GD+E+A FD MP R+ SW MI GY+K G+V SA FD++ ++++ +N ++A
Sbjct: 230 EFGDLESARSFFDAMPQRNSASWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAVIAC 289
Query: 326 YVRCKDYCECLRLFDRMIRG--DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
Y + E L+LF+ M+ + +P+E +L SV++ C+ G G WI SY+++ ++
Sbjct: 290 YAQNSKLKEALKLFNMMLHPNVNVQPDEMTLASVISPCSQFGDFRFGPWIESYMRRLGVE 349
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
D L T+LL +YA CG +D A +F + +K++V++ +MI+G GM+G+ A+++F EM
Sbjct: 350 MDGRLGTALLDLYAXCGSIDKAYELFHGLRKKDLVAYTAMILGCGMNGKAIDAIKLFDEM 409
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
PN F +L+ H+G+V EG+ F M++ Y + P V+HYG MVDL GRAG
Sbjct: 410 VDAQICPNLIMFTGLLTTYNHSGLVEEGYHCFTTMKK-YNLVPLVDHYGIMVDLFGRAGW 468
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
++++ EL+ +PM+ +WGALL AC H+N++LG+I AQH ELEP G L NI
Sbjct: 469 LQEALELIKSMPMQPHAGVWGALLFACRLHNNADLGEIAAQHFFELEPDTTGYCSLPCNI 528
Query: 564 YASEGKWDEVENLRRIMKEKELEK---AVG 590
Y S + D+V LR+I KEK K AVG
Sbjct: 529 YVSGERLDDVRRLRKIRKEKTFSKYLVAVG 558
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 315/587 (53%), Gaps = 32/587 (5%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFFDGIQ 117
+L L S ++ Q+H ++ +G +F + ++ C L S V + FD +
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALI---CMYLKSEMVGDAEAVFDSMV 267
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYE------KMMAKFVEHNHYTFPLLGKVCAGIR 171
D+ N ++ + A+ FY E +M V+ + F K+C+ R
Sbjct: 268 VRDSVTWNIMIGGY-------AAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DGPVWDLVTWNSMI 230
L K++H +VK G+E +R +L+ YS C V +A K+F ++VTW +MI
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMI 380
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISG----YVDVGDMEAANGLFDLMPF 282
G+V+N A +LF M + FT++++++G + + ++ +P
Sbjct: 381 GGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP- 439
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
++D Y K GNV + F + +++V+W+ +L + +D + + +F ++
Sbjct: 440 ---SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQL 496
Query: 343 IRGDAKPNEASLMSVLTACAN-MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
++ KPNE + SV+ AC++ ++ G+ IH+ K + +S++LLTMY+K G
Sbjct: 497 VKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGN 556
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
++ A VF E+++VSWNSMI GYG HG +KALE+F M+ +G +D TFI VL+A
Sbjct: 557 IESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTA 616
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
CTHAG+V EG YF++M + Y I+ K+EHY CMVDL RAG+ + ++++ +P A P
Sbjct: 617 CTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPT 676
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+W LL+AC H N ELGK+ A+ L+ L+P D YVLLSNI+A G W+E ++R++M
Sbjct: 677 IWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMD 736
Query: 582 EKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E++++K G S + + + +VY+ L E+ ++K
Sbjct: 737 ERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLK 783
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 196/432 (45%), Gaps = 32/432 (7%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
KVC + G++VH + +K GF D+ V SL+ MY + D R +F++ + ++V
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDI-------FTW---------NSMISGYVDVG 268
+W S++ GY +N G E+ + + + FT+ S+I G V V
Sbjct: 172 SWTSLLSGYARN---GLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVH 228
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
M NG F+ F N +I Y K V A FD M +R+ V+WNI++ Y
Sbjct: 229 AMIVKNG-FEFTTF----VCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAA 283
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
Y E ++F RM K + + L C+ ++ + +H + K + +
Sbjct: 284 IGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDI 343
Query: 389 STSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
T+L+ Y+KC +D A +F NVV+W +MI G+ + EKA+++F +M + G
Sbjct: 344 RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREG 403
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN T+ VL+ + L + +++ Y+ P V ++D + G + +S
Sbjct: 404 VRPNHFTYSTVLAGKPSS---LLSQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVES 458
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+ +P + A W A+L+ + +SE V L++ E P Y S I A
Sbjct: 459 ARVFYSIPAKDIVA-WSAMLTGLAQTRDSEKAMEVFIQLVK-EGVKPNEYTFSSVINACS 516
Query: 568 GKWDEVENLRRI 579
VE+ ++I
Sbjct: 517 SSAATVEHGKQI 528
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM 270
A ++F++ P+ D+ +N ++ + +N A LF +D+ + + G +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLF-----KDLHSSGLGVDGLTLSCAL 111
Query: 271 EAANGLFDLMPFR-------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+ LFD + R DV ++D Y K + R FD M ++NVV
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SW LL+ Y R E + L ++M PN + +VL A A+ +I+ G +H+ I
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMI 231
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K + + +L+ MY K ++ A VFD+M ++ V+WN MI GY G +
Sbjct: 232 VKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGF 291
Query: 438 EMFMEMEKRGPTPNDATFICVLSACT-----------HAGMVLEGWWY 474
+MF M G + F L C+ H G+V G+ +
Sbjct: 292 QMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 266/494 (53%), Gaps = 51/494 (10%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
+ CA R L +VHA V+ ++ ++H+ + G V A +VF +L
Sbjct: 21 RACASFRDL---LRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQVREPNLH 77
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDIFTW--------------------------- 257
N+MI Y +N A ++ M R F W
Sbjct: 78 LHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDLG 137
Query: 258 -------------------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
NS+I Y GD+ A +FD M RDVVSWN +I +A++
Sbjct: 138 KQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAHARL 197
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + AR F+ M + VVSW L++ Y D+ + F M +P++ S+++VL
Sbjct: 198 GQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVL 257
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
ACA +G +++G+WI++Y + ++ + + +L+ MYAKCG +D A +F+ M EK+V+
Sbjct: 258 PACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDVI 317
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGWWYFDL 477
SW++M+ G HG+ ++A+++F EME++G PN TF+ +LSAC+HAG++ EG YFD
Sbjct: 318 SWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFDR 377
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M +Y IEP VEHYGC+VDLL R+G ++ + +L+S +P+ A +WG++L+AC +H + +
Sbjct: 378 MNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGDVD 437
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ A+ L+ LEP D G V+L+N+YA+ +W EV N R+ ++ + + K G SL+
Sbjct: 438 TAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSLIEVD 497
Query: 598 EFASESIV-ENCPP 610
E + E+ P
Sbjct: 498 NVVQEFVAGEDLKP 511
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 202/426 (47%), Gaps = 49/426 (11%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
++ L +C++ ++ ++H + LSQ S+ A++++ LC + V+ + F ++EP
Sbjct: 16 VMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVH-LCNAHGRVAHATRVFSQVREP 74
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAK------FVEHNHYTFPLLGKVCAGIRSL 173
+ + N ++K++ + A++ Y + + + +T+P L K C G+ +L
Sbjct: 75 NLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMAL 134
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
GK+VH +V+ G E + V+NSLI MY+ G+++ ARKVF+ D+V+WN++I +
Sbjct: 135 DLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAH 194
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------------ 281
+ ++ AR +F+ MP++ + +W +++SGY GD A F LM
Sbjct: 195 ARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIV 254
Query: 282 ---------------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
R+ N +++ YAK G + A F+ M +
Sbjct: 255 AVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEK 314
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIG-QW 372
+V+SW+ ++ E ++LF M R G KPN + + +L+AC++ G++D G +
Sbjct: 315 DVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDY 374
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHG 431
I+P V ++ + + G + ++ +M + W S++ HG
Sbjct: 375 FDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHG 434
Query: 432 QGEKAL 437
+ A+
Sbjct: 435 DVDTAV 440
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 299/564 (53%), Gaps = 14/564 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH L+ G D+F+A+ L + + + + FD I +PD N I+ ++
Sbjct: 132 KIHGYLIKLGYDSDAFSAN-ALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLH 190
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE-GKKVHARIVKCGFELDLF 193
AL E M + N +T K CAG+ +LRE G+++H+ ++K D F
Sbjct: 191 EYHHRALELLRE-MNKSGMCPNMFTLSSALKACAGM-ALRELGRQLHSSLIKMDMGSDSF 248
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
+ LI MYS C + DAR VF+ P D++ WN++I G+ +N E A LF M
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308
Query: 254 I-FTWNSMISGYVDVGDMEA--------ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
I F ++ + + ++A A L F + V N +ID Y K G+V A
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVV-NSLIDTYGKCGHVEDA 367
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
F+ + ++V + L+ Y + E LRL+ M KP+ S+L ACA++
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
+ G+ +H +I K D+ SL+ MYAKCG ++ A F + + +VSW++MI
Sbjct: 428 SAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMI 487
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
G HG G++AL++F +M K G PN T + VL AC HAG+V E YF+ M+ ++ I
Sbjct: 488 GGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGI 547
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
EP EHY CM+DLLGRAG + + ELV+K+P +A +WGALL A H N +LG+ A+
Sbjct: 548 EPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAE 607
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESI 604
L+ LEP G +VLL+NIYAS G WD+V +RR+MK+ +++K G S + + I
Sbjct: 608 MLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFI 667
Query: 605 VENCPPHRKCIVYSMLGEIGAQMK 628
V + R +Y+ L E+ +K
Sbjct: 668 VGDRSHSRSTEIYAKLDELSDLLK 691
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 199/396 (50%), Gaps = 22/396 (5%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N + FP + K C + L GK+VH +V GF+ D FV NSL+ +Y+ CG DAR +F
Sbjct: 9 NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMI---SGYVDVG 268
+ P +V+WN++ YV + G A LF M I F+ +SMI +G D
Sbjct: 69 DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV 128
Query: 269 DMEAANG-LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
+G L L D S N ++D YAK+G + A + FD + ++VSWN ++A V
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ + L L M + PN +L S L ACA M + ++G+ +HS + K + D
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
L L+ MY+KC MD AR VF M E+++++WN++I G+ + + E+A +F M G
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK----VEHY--GCMVDLLGRA 501
N T VL + L+ + + ++I+ + K ++Y ++D G+
Sbjct: 309 IGFNQTTLSTVLKSIA----ALQANY---MCRQIHALSLKSGFEFDNYVVNSLIDTYGKC 361
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
G + D+ + + P+ L+ +L++A + E
Sbjct: 362 GHVEDATRVFEESPI-VDLVLFTSLVTAYAQDGQGE 396
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 232/491 (47%), Gaps = 35/491 (7%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASR--VLKKLCTSLSSVSLSVLFFDGIQE 118
L++C+ K+ Q+H ++V+G D F A+ +L C FD I +
Sbjct: 17 LKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARS---LFDAIPD 73
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
N + ++ + A+S +++ M+ + N ++ + VC G+ +G+K
Sbjct: 74 RSVVSWNALFSCYVHSDMHGEAVSLFHD-MVLSGIRPNEFSLSSMINVCTGLEDSVQGRK 132
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H ++K G++ D F N+L+ MY+ G + DA VF++ D+V+WN++I G V +
Sbjct: 133 IHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEY 192
Query: 239 VGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN----C 290
A EL M + ++FT +S + + E L + D+ S +
Sbjct: 193 HHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG 252
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+ID Y+K ++ AR F M R++++WN +++ + + ++ E LF M N
Sbjct: 253 LIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFN 312
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ +L +VL + A + + + IH+ K + D + SL+ Y KCG ++ A VF+
Sbjct: 313 QTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFE 372
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC--VLSACTHAGMV 468
++V + S++ Y GQGE+AL +++EM+ RG P+ +F+C +L+AC
Sbjct: 373 ESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPD--SFVCSSLLNACASLSAY 430
Query: 469 LEGWWY------FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+G F M I+ +V++ + G + D+ S++P+ G
Sbjct: 431 EQGKQVHVHILKFGFMSDIFAGNS-------LVNMYAKCGSIEDASCAFSRIPVR-GIVS 482
Query: 523 WGALLSACSTH 533
W A++ + H
Sbjct: 483 WSAMIGGLAQH 493
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
K NE + SVL AC + +G+ +H + D ++ SL+ +YAKCG AR+
Sbjct: 7 KCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARS 66
Query: 408 VFDNMTEKNVVSWNSMIMGY---GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
+FD + +++VVSWN++ Y MHG+ A+ +F +M G PN+ + +++ CT
Sbjct: 67 LFDAIPDRSVVSWNALFSCYVHSDMHGE---AVSLFHDMVLSGIRPNEFSLSSMINVCTG 123
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL-- 522
++G + ++ + +VD+ + G++ D+ + ++ A P +
Sbjct: 124 LEDSVQGRKIHGYLIKL-GYDSDAFSANALVDMYAKVGILEDASSVFDEI---AKPDIVS 179
Query: 523 WGALLSACSTH 533
W A+++ C H
Sbjct: 180 WNAIIAGCVLH 190
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 250/435 (57%), Gaps = 1/435 (0%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N L+ G V AR++F P D++ W +M+DG ++ +V AR LFD MPER++
Sbjct: 171 NILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVV 230
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN+MISGY ++ A LF MP RD+ S N M+ G+ + ++ AR FD M RN
Sbjct: 231 SWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERN 290
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV+W ++ Y++ K L LF M+ +PN+ + + L AC+++ + G+ +H
Sbjct: 291 VVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQ 350
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
I K + D + ++L+ +YAKCG + LAR +FD EK+++SWN +I Y HG G +
Sbjct: 351 MICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIE 410
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ ++ +M++ G PND T++ +LSAC+H+G+V EG F+ M I + EHY C++
Sbjct: 411 AILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLI 470
Query: 496 DLLGRAGLMRDSEELVSKLPME-AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
DL RAG + D++ L+ L ++ A ++W ALL C+ H N +G + A++L++ EP +
Sbjct: 471 DLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAEPDNA 530
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
G Y LLSNIYAS GKW E +R M + L+K G S + + +
Sbjct: 531 GTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARDKSHSESD 590
Query: 615 IVYSMLGEIGAQMKM 629
++Y +L I M++
Sbjct: 591 LIYGLLQNIHHMMRI 605
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 188/394 (47%), Gaps = 32/394 (8%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE--RD 253
N LI + G V DARK+F+ P WD+V+W +++ Y + + ARELFD P+ R+
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFD-RPDARRN 104
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+ TW +++SGY ++ A LF MP R+VVSWN M++ YA G V A FDRM +
Sbjct: 105 VVTWTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPV 164
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDR-----------MIRGDAKPNEASLMSVL-TAC 361
R+ SWNILLA VR + LF R M+ G A+ + VL +
Sbjct: 165 RDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSM 224
Query: 362 ANMGVIDIGQWIHSYIQKCRI-----------KPDVLLSTSLLTMYAKCGVMDLARNVFD 410
V+ I Y + RI + D+ ++T + + + AR +FD
Sbjct: 225 PERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFD 284
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M E+NVV+W +M+ GY Q E AL +F M G PN TF+ L AC+ + E
Sbjct: 285 EMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCE 344
Query: 471 GWWYFDLM-QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
G ++ + ++ + VE ++++ + G + + +L L E W +++A
Sbjct: 345 GKQVHQMICKTTFQFDAFVE--SALMNVYAKCGEIGLARKLFD-LSREKDLISWNGIIAA 401
Query: 530 CSTHSNSELGKIVAQHLME--LEPRDPGPYVLLS 561
+ H ++ + + E P D VLLS
Sbjct: 402 YAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLS 435
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E + T+M +L AL + +MA N TF C+ +
Sbjct: 282 LFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAG-TRPNQVTFLGALDACSDLA 340
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L EGK+VH I K F+ D FV ++L+++Y+ CGE+ ARK+F+ DL++WN +I
Sbjct: 341 ALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIA 400
Query: 232 GYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLM------P 281
Y + A L++ M E + T+ ++S G ++ +F+ M
Sbjct: 401 AYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIA 460
Query: 282 FRDVVSWNCMIDGYAKIGNVTSAR 305
RD + C+ID ++ G + A+
Sbjct: 461 VRD-EHYTCLIDLCSRAGRLDDAK 483
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/407 (39%), Positives = 239/407 (58%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D ++I+ Y G++L AR++ P ++ +MI+GY+++ + A E+F
Sbjct: 292 EKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQ 351
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+ RD WNSMI+GY G + A LF M +D+VSWN MI YA+ G + A F
Sbjct: 352 ISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMF 411
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ M RNVVSWN L+ YV+ Y E L F M + KP++ +++ L A AN+ ++
Sbjct: 412 NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALN 471
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+G +H K D+ + ++LTMYAK G + A NVF + K+VVSWNS+I GY
Sbjct: 472 VGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYA 531
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
++G G++A+E+F M RG P++ TF +LSAC H G V +G F M Y I+P+
Sbjct: 532 LNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQS 591
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHY C+++LLGR G + ++ E+V + + +WGALL AC H N EL K A+ L+
Sbjct: 592 EHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLA 651
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
LEP++ YVLLSN++A G+WD VE +R +MKE + EK G S +
Sbjct: 652 LEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIE 698
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 162/313 (51%), Gaps = 27/313 (8%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D RN+LI Y+ +A+K+F++ V ++V+WNS++ GY KN ++ + F+ M
Sbjct: 139 DTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMG 198
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ER++ +WN M+ GYV VGD+++A F +P +VVSW M+ G+A G +T ARN F+
Sbjct: 199 ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNE 258
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL------------MSVL 358
M +N+VSWN ++ YVR + +LF M D+ A + +L
Sbjct: 259 MPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREIL 318
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARN 407
+ I+ Y+Q R+ D + S++T YA CG D A
Sbjct: 319 NLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALR 378
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F M K++VSWN+MI Y GQ +KALEMF EM++R N ++ +++ G+
Sbjct: 379 LFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQER----NVVSWNSLITGYVQNGL 434
Query: 468 VLEGWWYFDLMQR 480
E F LM++
Sbjct: 435 YFEALNCFILMKQ 447
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 207/398 (52%), Gaps = 22/398 (5%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++ NS+I Y+ G + +AR++F+ P +LV+WNSMI GY+ N V A LFD
Sbjct: 43 ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDR 102
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNC 307
M +RDI++W MI+ Y +G++E A LF+L+P + D V N +I GYAK A+
Sbjct: 103 MFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKL 162
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD M ++NVVSWN +L+ Y + L+ F+ M + N S ++ +G +
Sbjct: 163 FDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAM----GERNVVSWNLMVDGYVGVGDL 218
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D W+ + +K P+V+ ++L+ +A G M ARN+F+ M KN+VSWN+MI Y
Sbjct: 219 D-SAWM--FFKKIPT-PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAY 274
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
Q + A ++FMEM P + ++ +++ G +L+ +LM YK
Sbjct: 275 VRENQIDDAYKLFMEM----PEKDSVSWTAMINGYVRVGKLLQAREILNLMP--YK---N 325
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+ M++ ++G M ++ E+ S++ + W ++++ + ++ + Q
Sbjct: 326 IAAQTAMINGYLQSGRMDEANEIFSQISVR-DSVCWNSMITGYAHCGRTDEALRLFQ--- 381
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
E+ +D + + YA G+ D+ + M+E+ +
Sbjct: 382 EMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNV 419
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ +QE + N+++ ++ F AL+ + M + + + T + A + +
Sbjct: 411 FNEMQERNVVSWNSLITGYVQNGLYFEALNCFI-LMKQQGEKPDQTTIVCCLRASANLAA 469
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L G ++H +K GF DLFV+N+++ MY+ G V +A VF + D+V+WNS+I G
Sbjct: 470 LNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAG 529
Query: 233 YVKNREVGFARELFDFMPERDIF----TWNSMIS-----GYVDVG--DMEAANGLFDLMP 281
Y N A ELF+ MP R I T+ ++S G+VD G ++ + + P
Sbjct: 530 YALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKP 589
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ + C+I+ ++G + A M+ V S I AL C+
Sbjct: 590 QSE--HYACVINLLGRVGRLEEAVEIVQ--GMKTVSSAKIWGALLWACR 634
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 307/574 (53%), Gaps = 49/574 (8%)
Query: 105 SVSLSVLFFDGIQE-PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLL 163
++ L++L F+ P+ ++ NT++ F N+ + Y M+ + TF L
Sbjct: 15 NLELAILLFNHFTPYPNLYIFNTMILGFPFSNEKAFTI---YRSMLQNGTYPDRQTFLYL 71
Query: 164 GKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ + + E K++H + G + ++RNSLI Y G AR++F++ +
Sbjct: 72 LQTT---KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRN 128
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMP----ERDIFT---------------------- 256
+V++N+MI G+ K + ELF M E D FT
Sbjct: 129 VVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHA 188
Query: 257 -------------WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+N+++ YV +++ A +FD +D VSWN +I GYAK+G +
Sbjct: 189 QIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELEL 248
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A + F+++ R++VSWN L++ Y + DY LF RM + KP++ +++++++A A
Sbjct: 249 ACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAE 308
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
MG +D G+WIH K K + ++L+ MY KCG ++ A +F+ + EK+V +W +M
Sbjct: 309 MGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTM 368
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G+ HG G KALE+F M+ PND TF+ VL+AC+H+G+V EG F M++ Y
Sbjct: 369 ITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYS 427
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
IEP VEHYGC+VDLL R+G + D+ ++ K+PME ++WGA+LSAC H N EL +
Sbjct: 428 IEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERAL 487
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASES 603
L++LEP G Y+LLSN+YA+ G+W +++R +M + ++K G S V +
Sbjct: 488 MELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDF 547
Query: 604 IVENCPPHRKCIVYSMLGEIGAQMKMCRRDVASQ 637
N R + S+L + +M++ DV S+
Sbjct: 548 TASNKQHPRWMDICSILSFLTNEMRL-EADVPSK 580
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 203/434 (46%), Gaps = 47/434 (10%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGL-SQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
L L++ V E QIH LV GL S++ + + ++K+ + + FD +
Sbjct: 66 QTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDN-GCFECARQLFDEM 124
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
+ + NT++ F + + G L +++ M + +E + +T L +C + + G
Sbjct: 125 SDRNVVSYNTMILGFAKVGNILGILELFHD-MRSHGLEPDDFTMLGLLLLCGQLGETKLG 183
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW-DLVTWNSMIDGYVK 235
K VHA+I K +L + N+L+ MY C E+ ARKVF DGP+ D V+WN++I GY K
Sbjct: 184 KSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVF-DGPMEKDTVSWNTIIAGYAK 242
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV---------- 285
E+ A +LF+ +P RDI +WNS+ISGY GD LF M +V
Sbjct: 243 VGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNL 302
Query: 286 -----------------------------VSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
S + +ID Y K G++ A F+++ ++V
Sbjct: 303 ISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDV 362
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
+W ++ + + L LF M + + KPN+ + +SVL AC++ G++D G I S
Sbjct: 363 TTWTTMITGFAFHGFGNKALELFSVM-QAETKPNDVTFVSVLAACSHSGLVDEGLKIFSS 421
Query: 377 IQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGE 434
++K I+P V L+ + + G + A V + M E + W +++ MH E
Sbjct: 422 MKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNME 481
Query: 435 KALEMFMEMEKRGP 448
A ME+ K P
Sbjct: 482 LAERALMELLKLEP 495
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 201/311 (64%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D ++N +I YA+ G VT AR FD M RN VSW+ ++ YV+ D E L LF RM
Sbjct: 276 DASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ 335
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+P++ L+ VL ACA +GV++ G+W+H Y++ I+ V L T+L+ MYAKCG M
Sbjct: 336 ADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQ 395
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
LA VF M EKNV++W +MI G MHG+G +ALE+F +ME+ G P+D FI L ACT
Sbjct: 396 LAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACT 455
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H G+V +G FD M R Y I+PK+EHYGCMVDLL R GL+ ++ E+V K+PM+ +W
Sbjct: 456 HTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIW 515
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GAL++ C H N EL + V +H +ELEP G YVLL NIYA+ G+ +R +M+EK
Sbjct: 516 GALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREK 575
Query: 584 ELEKAVGSSLV 594
++K G S V
Sbjct: 576 GVDKTPGCSTV 586
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 169/401 (42%), Gaps = 54/401 (13%)
Query: 95 VLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE 154
VLK L + L G A + N ++++ P AL Y + A
Sbjct: 145 VLKTRLQELIGEDQAALVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGHHP 204
Query: 155 HNHYTFPLLGKVCA------GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS-VCGE 207
H T P L K A G R L VHA VK G L V N+LI +++ + G
Sbjct: 205 TPH-TLPSLLKSLALSPAVPGARGL--ALAVHAHAVKLGLAGFLLVSNALIRVHAGILGR 261
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
+ DA + D T+N++I Y + V AR LFD MP R+ +W++M++GYV
Sbjct: 262 LSDALVLLRTAASVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQA 321
Query: 268 GDMEAANGLFDLMPFRDVV----------------------SW----------------- 288
GD A GLF M V W
Sbjct: 322 GDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLG 381
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
++D YAK G + A F M +NV++W ++ E L LF +M R K
Sbjct: 382 TALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVK 441
Query: 349 PNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
P++ + + L AC + G++D G + S ++K IKP + ++ + A+ G+++ AR
Sbjct: 442 PDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEARE 501
Query: 408 VFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
+ + M K + + W +++ G H E ++ ++E+E
Sbjct: 502 MVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELE 542
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 320/638 (50%), Gaps = 74/638 (11%)
Query: 18 DKFIKSQKNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIH 77
+K+ + + +P PP + E FT ++ L SH + C+T Q+H
Sbjct: 319 EKYNRPRHEVPGDPPGEASAEYACFFTLNSSRSLT----SH------KRCATSTTLTQLH 368
Query: 78 TQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDP 137
L ++GL + A++++++ + S FD +PD+FM ++K ++
Sbjct: 369 AHLFITGLHRHPPASTKLIESYA-QIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFF 427
Query: 138 FGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL------------------------ 173
A+S Y+E + + +++ FP + K C+G L
Sbjct: 428 EEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEAV 487
Query: 174 ----------------------------REGKKVHARIVKCGFELDL-FVRNSLIHMYSV 204
+EG+ VH +++ + +L F+ +L+ +Y+
Sbjct: 488 EPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYAD 547
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF------DFMPERDIFTWN 258
G + D KVFE +++WN++I + +N + A LF MP+ +
Sbjct: 548 TGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASS 607
Query: 259 SMISGYVDVGDMEAA--NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
G + + A + F D V N +ID YAK G V SA F+++ +++
Sbjct: 608 LSACGTISFSQLGAQIHGYIIKTGNFNDFVQ-NALIDMYAKCGFVHSANKMFEKIKEKSL 666
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
V+WN ++ + + E + LFD+M K ++ + +SV+ AC+++G ++ G+W+H
Sbjct: 667 VTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHK 726
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ ++ D L T+L MY+KCG + +A VFD M+E+++VSW+ MI GYGMHGQ
Sbjct: 727 LIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINAT 786
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+ +F +M G PND TF+ +LSAC+HAG V EG YF+ M + +EPK +H+ CMVD
Sbjct: 787 ISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVD 845
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
LL RAG + + ++++ LP A ++WGALL+ C H ++ K + ++L++++ D G
Sbjct: 846 LLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGY 905
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
Y LLSNIYA EG WD+ +R +MK K L K G S +
Sbjct: 906 YTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTI 943
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 300/571 (52%), Gaps = 24/571 (4%)
Query: 41 PKFTDTDNQRLPIVDLSHP-----ILQKLESCSTVKEFH---QIHTQLLV-SGLSQDS-F 90
P+ T + LP HP ++ L+ +T K IH QL+V + S+DS
Sbjct: 7 PRVTPAFSMYLP-----HPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDI 61
Query: 91 AASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMA 150
L L + + FD + + + + +M +L + L + +
Sbjct: 62 TQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSL 121
Query: 151 KFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD 210
N Y F ++ CA ++EGK+ H ++K G L +V+N+LIHMYS C V
Sbjct: 122 DSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDS 181
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVD 266
A ++ + P D+ ++NS++ V++ G A ++ M + D T+ S++
Sbjct: 182 AMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQ 241
Query: 267 VGDMEAA----NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
+ D++ L DV + +ID Y K G V +AR FD + RNVV+W +
Sbjct: 242 IRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAV 301
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
L Y++ + E L LF +M D +PNE + +L ACA++ + G +H I
Sbjct: 302 LTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGF 361
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
K +++ +L+ MY+K G +D + NVF NM ++V++WN+MI GY HG G++AL +F +
Sbjct: 362 KNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQD 421
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M G PN TFI VLSAC H +V EG++YFD + + + +EP +EHY CMV LLGRAG
Sbjct: 422 MMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAG 481
Query: 503 LMRDSEELV-SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
L+ ++E + + ++ W LL+AC H N LGK + + +++++P D G Y LLS
Sbjct: 482 LLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLS 541
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
N++A KWD V +R++MKE+ ++K G+S
Sbjct: 542 NMHAKARKWDGVVKIRKLMKERNIKKEPGAS 572
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 294/552 (53%), Gaps = 70/552 (12%)
Query: 80 LLVSGLSQDSFAASRVLKKLCTSLSSVSL--SVLFFDGIQEPDAFMCNTIMKSFLMLNDP 137
+L + L D F+AS+++ C S SL + L F+ I P F CN+I++ + N P
Sbjct: 1 MLRTCLFVDPFSASKIVA-FCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLP 59
Query: 138 FGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNS 197
A+ FY + MM + ++ + +TFP L K C L EGK+
Sbjct: 60 RQAILFY-QLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQ------------------- 96
Query: 198 LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTW 257
+H +S ++GFA D +
Sbjct: 97 -LHCHST---------------------------------KLGFAS---------DAYIQ 113
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM-CMRNV 316
N++++ Y + G + +A +FD M + VVSW MI YA+ A F RM N+
Sbjct: 114 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNL 173
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
WNI++ +V DY E L LF+ M K ++ ++ S+L AC ++G +++G+W+H Y
Sbjct: 174 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVY 233
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I+K +I+ DV L T+L+ MYAKCG ++ A VF M EK+V++W ++I+G M GQG KA
Sbjct: 234 IEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKA 293
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
LE+F EM+ P+ TF+ VL+AC+HAG+V EG YF+ M Y I+P +EHYGCMVD
Sbjct: 294 LELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVD 353
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGP 556
+LGRAG + ++E+L+ +PM + LLSAC H N + + AQ L+EL+P++ G
Sbjct: 354 MLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGT 413
Query: 557 YVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIV 616
YVLLSNIY+S W+ + +R +M E+ ++K G S + G E + + + +
Sbjct: 414 YVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEI 473
Query: 617 YSMLGEIGAQMK 628
Y L ++ ++K
Sbjct: 474 YETLDDMMRRLK 485
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 207/646 (32%), Positives = 318/646 (49%), Gaps = 101/646 (15%)
Query: 57 SHPILQKLESC---STVKEFHQIHTQLLVSGLSQDSFAASRVL------------KKLC- 100
S P + L+SC + + +H ++L++ S + F +R++ +KL
Sbjct: 15 SSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFD 74
Query: 101 ----------TSLSSVSLSVLFFD-------GIQEPDAFMCNTIMKSFLMLNDPFGALSF 143
SL SV F D + EPD N+++ F +D F
Sbjct: 75 RMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQ-HDRFEESLE 133
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y+ KM + N Y+F CAG+ L G +VHA + K + D+++ ++LI MYS
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYS 193
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PER----- 252
CG V A +VF +LVTWNS+I Y +N A E+F M P+
Sbjct: 194 KCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLAS 253
Query: 253 -----------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
D+ N+++ Y + A +FD M R
Sbjct: 254 VVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR 313
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+VVS M+ GYA+ +V +AR F +M RNVVSWN L+A Y + + E LRLF +
Sbjct: 314 NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLK 373
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
R P + ++L K D+ + SL+ MY KCG ++
Sbjct: 374 RESIWPTHYTFGNLL------------------------KSDIFVGNSLIDMYMKCGSIE 409
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
VF+ M E++ VSWN++I+GY +G G +AL++F +M G P+ T I VL AC+
Sbjct: 410 DGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACS 469
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HAG+V EG YF M+ + + P +HY CMVDLLGRAG + +++ L+ +P+ +W
Sbjct: 470 HAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 528
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
G+LL+AC H N E+GK A+ L+E++P + GPYVLLSN+YA G+W +V +R++M+++
Sbjct: 529 GSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQ 588
Query: 584 ELEKAVGSSLVHPGEFASESIVEN-CPPHRKCIVYSMLGEIGAQMK 628
+ K G S + +V++ PHRK I YS+L + QMK
Sbjct: 589 GVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQI-YSVLKMLTEQMK 633
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 198/423 (46%), Gaps = 57/423 (13%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N F L C RS R + VHARI+ F +++F++N LI +Y C + DARK+F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME---- 271
+ P + TWNS+I K+ + A LF MPE D +WNSM+SG+ E
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLE 133
Query: 272 ----------------------AANGLFDL-------------MPFRDVVSWNCMIDGYA 296
A GL DL DV + +ID Y+
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYS 193
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G+V A F M RN+V+WN L+ Y + E L +F RM+ +P+E +L S
Sbjct: 194 KCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLAS 253
Query: 357 VLTACANMGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
V++ACA++ + G IH+ + K + + D++L +L+ MYAKC ++ AR VFD M+ +
Sbjct: 254 VVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR 313
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
NVVS SM+ GY + A MF +M +R N ++ +++ T G E F
Sbjct: 314 NVVSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQNGENEEALRLF 369
Query: 476 DLMQRIYKIEPKVEHYG-----------CMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
L++R I P +G ++D+ + G + D + K+ E W
Sbjct: 370 RLLKR-ESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWN 427
Query: 525 ALL 527
A++
Sbjct: 428 AII 430
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 233/385 (60%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G++ +A+ + + P +++ GY++++ + AR +FD + RD WN+MISGYV
Sbjct: 305 GKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYV 364
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G ++ A LF MP +D+VSWN MI GYA G + A F +M RN VSWN +++
Sbjct: 365 HCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISG 424
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+V+ E L+ F M R + + ++ L+ACA++ + +G+ HS + + D
Sbjct: 425 FVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGD 484
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+L++ YAKCG + AR VFD M ++VSWN++I GY +G G +A+ +F EME
Sbjct: 485 SFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMED 544
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
P++ TF+ VLSAC+HAG++ EG+ +F+ M + Y + P EHY CMVDLLGR+G +
Sbjct: 545 NDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLS 604
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ E++ + ++ +WGA+L AC H N EL ++ A+ L ELEP YVLLSNI A
Sbjct: 605 EAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITA 664
Query: 566 SEGKWDEVENLRRIMKEKELEKAVG 590
GKWDE +N+R +KE+ + K G
Sbjct: 665 EAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 204/423 (48%), Gaps = 46/423 (10%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I Y+ G DA + + P D+++WNS++ G +N E+ A + FD MP RD+
Sbjct: 140 NAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMV 199
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN M+ GYV GD+++A GLF +P +VVSW +++GY + G + AR FDR+ RN
Sbjct: 200 SWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRN 259
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ---- 371
V +WN++L+ Y+R E +LF M N S ++++A G + +
Sbjct: 260 VAAWNVMLSGYLRLSHMEEAYKLFTEM----PDKNSISWTTMISALVRGGKLQEAKDLLD 315
Query: 372 ------------WIHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARNV 408
+H Y+Q I D + ++++ Y CG++D A +
Sbjct: 316 KMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVL 375
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F M K++VSWN+MI GY GQ KA+ +F +M +R N ++ V+S G+
Sbjct: 376 FQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQR----NTVSWNSVISGFVQNGLC 431
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA--GPALWG-A 525
+E +F LM+R K Y C + + + S L G + G A
Sbjct: 432 VEALQHFVLMRRDAK-RADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNA 490
Query: 526 LLSACSTHSNSELGKIVA--QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
L+SA ++ G+I+ Q E+ D + L + YAS G E ++ R M++
Sbjct: 491 LISAY-----AKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDN 545
Query: 584 ELE 586
++
Sbjct: 546 DVR 548
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 134/277 (48%), Gaps = 13/277 (4%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N+++ + G + DAR++F++ P + V+WN+MI + V AR+LFD MP RD F
Sbjct: 46 NAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGF 105
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMR 314
+W M+S Y G++ A D MP + +N MI GYAK G A M
Sbjct: 106 SWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAP 165
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+++SWN +L R + ++ FD M D S +L G +D +
Sbjct: 166 DIISWNSVLVGLTRNGEMVRAVKFFDEMPARDM----VSWNLMLEGYVRAGDVDSAAGLF 221
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
+ + P+V+ +LL Y + G + AR +FD + ++NV +WN M+ GY E
Sbjct: 222 AGVP----SPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHME 277
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+A ++F EM P N ++ ++SA G + E
Sbjct: 278 EAYKLFTEM----PDKNSISWTTMISALVRGGKLQEA 310
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 59/332 (17%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
N + ++ ++ AR LFD MP R+ ++N+M+S G + A LFD +P R+ V
Sbjct: 15 NQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTV 74
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
SWN MI + G V AR+ FD M R+ SW ++++ Y R + DRM
Sbjct: 75 SWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRM---- 130
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI-----------KPDVLLSTSLLTM 395
P + TAC N I Y + R PD++ S+L
Sbjct: 131 --PGDKC-----TACYN-------AMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVG 176
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
+ G M A FD M +++VSWN M+ GY G + A +F + P+PN ++
Sbjct: 177 LTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGV----PSPNVVSW 232
Query: 456 ICVLSACTHAGMV---------------------LEGWWYFDLMQRIYKI-----EPKVE 489
+ +L+ AG + L G+ M+ YK+ +
Sbjct: 233 VTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSI 292
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
+ M+ L R G ++++++L+ K+P ++ A
Sbjct: 293 SWTTMISALVRGGKLQEAKDLLDKMPFDSFAA 324
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALS-FYYEKMMAKFVEHNHYTFPLLGKVC 167
+V F + + + N+++ F+ AL F + AK + + Y L C
Sbjct: 403 AVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCL--SAC 460
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
A + +L G++ H+ + + G+ D F N+LI Y+ CG +L+AR+VF++ P D+V+WN
Sbjct: 461 ADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWN 520
Query: 228 SMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM--- 280
++IDGY N A +F M + D+ T+ ++S G ++ F+ M
Sbjct: 521 ALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKD 580
Query: 281 -PFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
R V + CM+D + G ++ A M ++ N W +L
Sbjct: 581 YALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLG 627
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 309/583 (53%), Gaps = 14/583 (2%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDG 115
L+H ++Q ++ Q+H L+ +G + +F + ++ + + + ++ FD
Sbjct: 8 LAH-VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVN-MYSKCGELDHALKLFDT 65
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ + + + T M S L N F + M + F + CA + S+
Sbjct: 66 MPQRN-LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEM 124
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK++H +K G +LFV ++L MYS CG + DA KVFE+ P D V+W +MIDGY K
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 184
Query: 236 NREVGFARELFDFMPERDI-FTWNSMISGYVDVGDMEAA-------NGLFDLMPFRDVVS 287
E A F M + ++ + + S G ++A + + L D+
Sbjct: 185 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 244
Query: 288 WNCMIDGYAKIGNVTSARNCF--DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
N + D Y+K G++ SA N F D C RNVVS+ L+ YV + + L +F + R
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSEC-RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+PNE + S++ ACAN ++ G +H+ + K D +S+ L+ MY KCG+++ A
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHA 363
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
FD + + ++WNS++ +G HG G+ A++ F M RG PN TFI +L+ C+HA
Sbjct: 364 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHA 423
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V EG YF M + Y + P EHY C++DLLGRAG +++++E ++++P E W +
Sbjct: 424 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 483
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
L AC H + E+GK+ A+ L++LEP++ G VLLSNIYA+E +W++V ++R M++ +
Sbjct: 484 FLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNV 543
Query: 586 EKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+K G S V G E+ RK +Y L + Q+K
Sbjct: 544 KKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIK 586
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L V+ A + G+ +H+ + P L+ L+ MY+KCG +D A +FD M
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
++N+VSW +MI G + + +A+ F M G P F + AC G + G
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
L + + I ++ + D+ + G M D+ ++ ++P + W A++ S
Sbjct: 127 QMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYS 183
>gi|449446907|ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 456
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 268/450 (59%), Gaps = 1/450 (0%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y +M + + +TF + A + +L G++VHAR+++ GF + V SL+ MY+
Sbjct: 4 YARMQKAGILESEFTFSSVLSASARMPALYLGRQVHARVIQLGFLSNKIVLTSLMDMYAK 63
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
CG +LDA +F D+V W SMI GY K + A++LFD M +R+ F+W +M++GY
Sbjct: 64 CGFILDAESLFFAIDDKDIVAWTSMIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGY 123
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ G+M+AA L+D MP ++ VS MI GY + G+V A F + + + ++A
Sbjct: 124 ANWGNMKAAKQLYDAMPEKNPVSQLAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVA 183
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y + E + ++ +M + NE +L+ L+AC +G +++ + + +
Sbjct: 184 CYSQNGYGKEAIEMYKQMKEKNLGTNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDR 243
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
+ +S +L+ ++K G ++ A+ F+ M +++VV+++++I+ HG+ ++AL++F +ME
Sbjct: 244 TLFVSNALIHKHSKFGNIERAQEEFNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKME 303
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
+ G PN FI VL+AC HAG++ +G YF+LM++ + IEP+ HY CMVDLLGRAG +
Sbjct: 304 EEGIKPNQICFIGVLNACAHAGLIEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEV 363
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
+ ++ K E WG+LL AC H N E+G+I A+HL E+EP + G YVLL+N Y
Sbjct: 364 EMAYNVI-KGAREIDAKTWGSLLGACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTY 422
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A +W+E E +R +M E+ ++K G S V
Sbjct: 423 AQMKEWNEAEKVRNVMVERGIKKFPGYSWV 452
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 66/111 (59%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+ L+ RM + +E + SVL+A A M + +G+ +H+ + + + ++ TSL+ M
Sbjct: 1 MSLYARMQKAGILESEFTFSSVLSASARMPALYLGRQVHARVIQLGFLSNKIVLTSLMDM 60
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
YAKCG + A ++F + +K++V+W SMI GY G + A ++F +M +R
Sbjct: 61 YAKCGFILDAESLFFAIDDKDIVAWTSMIRGYSKLGMMDDAQDLFDKMGQR 111
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 305/542 (56%), Gaps = 13/542 (2%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C++V H Q+H+ + +G+S D +L L + + V + FF + +
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD-LYSKCADVETAHKFFLXTETEN 427
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ N ++ ++ L++ + + + M + N +T+P + + C + +L G+++H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP-NQFTYPSILRTCTSLGALYLGEQIH 486
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
++K GF+L+++V + LI MY+ G++ A ++ P D+V+W +MI GYV++
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 241 FARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMI 292
A +LF+ M R I + S IS + + + + D+ N +I
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YA+ G + A F+++ +N +SWN L++ + + E L++F RM+R +A+ N
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMF 666
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ S ++A A++ I GQ IHS + K + +S SL+++YAK G + A F++M
Sbjct: 667 TYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDM 726
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+E+NV+SWN+MI GY HG G +AL +F EM+ G PN TF+ VLSAC+H G+V EG
Sbjct: 727 SERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGL 786
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF+ M +I+ + PK EHY C+VDLLGRAG + + E + ++P+ A +W LLSAC
Sbjct: 787 DYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVI 846
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N E+G+ A HL+ELEP D YVL+SNIYA +W + R++MK+ ++K G S
Sbjct: 847 HKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRS 906
Query: 593 LV 594
+
Sbjct: 907 WI 908
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 205/441 (46%), Gaps = 26/441 (5%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+V FD F N ++ F+ F + +M+A+ + N YTF + K C
Sbjct: 112 AVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLF-RRMLAEGITPNGYTFAGVLKACV 170
Query: 169 GIR-SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
G + K+VH+R GF+ V N LI +YS G + A+KVF + D+VTW
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLFDLMPFR 283
+MI G +N A LF M +IF +S++S + E L L
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL---- 286
Query: 284 DVVSW---------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
V+ W N ++ Y++ + SA F M R+ VS+N L++ V+
Sbjct: 287 -VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L LF +M R KP+ ++ S+L+ACA++G + G +HS+ K + D++L SLL
Sbjct: 346 ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLD 405
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
+Y+KC ++ A F +N+V WN M++ YG + E+F +M+ G PN T
Sbjct: 406 LYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFT 465
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVS 512
+ +L CT G + G + + K ++ Y C ++D+ + G + + ++
Sbjct: 466 YPSILRTCTSLGALYLGE---QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILR 522
Query: 513 KLPMEAGPALWGALLSACSTH 533
+LP E W A+++ H
Sbjct: 523 RLP-EDDVVSWTAMIAGYVQH 542
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 158/342 (46%), Gaps = 27/342 (7%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M + V N+ + L + C SL E ++H RI K GF+ + + +SL+ Y G+
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
A KVF++ + +WN MI +V + LF M I +GY
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP-----NGYTFA 163
Query: 268 GDMEAANG------------------LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
G ++A G FD P + N +ID Y+K G + SA+ F+
Sbjct: 164 GVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP----LVANLLIDLYSKNGYIESAKKVFN 219
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
+CM+++V+W +++ + E + LF M + P L SVL+A + + ++
Sbjct: 220 CICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFEL 279
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G+ +H + K + + L+ +Y++ + A +F M ++ VS+NS+I G
Sbjct: 280 GEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ 339
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
G ++ALE+F +M++ P+ T +LSAC G + +G
Sbjct: 340 QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 15/248 (6%)
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+ ++D Y + G+ A FD R+V SWN ++ ++V K + LF RM+
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 349 PNEASLMSVLTACANMGV-IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
PN + VL AC + + + +HS L++ L+ +Y+K G ++ A+
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ + K++V+W +MI G +G E+A+ +F +M P VLSA T +
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 468 VLEGWWYFDLMQRIYKIEPK----VEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPA 521
F+L ++++ + K E Y C +V L R+ + +E + S + G +
Sbjct: 277 -------FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Query: 522 LWGALLSA 529
+ +L+S
Sbjct: 330 -YNSLISG 336
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 24/242 (9%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
++L + M + N + + +L C G + +H I K + LL SL+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y + G A VFD + ++V SWN MI + + +F M G TPN TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG---------CMVDLLGRAGLMRD 506
VL AC + + ++ + +YG ++DL + G +
Sbjct: 163 AGVLKACVGGDIAF---------NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIES 213
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV--AQHLMELEPRDPGPYVLLSNIY 564
++++ + + M+ W A++S S + E ++ H E+ P PYVL S +
Sbjct: 214 AKKVFNCICMK-DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT---PYVLSSVLS 269
Query: 565 AS 566
AS
Sbjct: 270 AS 271
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 289/524 (55%), Gaps = 46/524 (8%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F + E D+ NTI+ +F +L + E M + + N T+ + CA I
Sbjct: 82 FRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVE-MWIQGCQPNSMTYASVLSACANIYD 140
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+ GK +HARIV+ LD+ V N L+ MY+ CG + +++VF ++VTW S+I G
Sbjct: 141 FQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISG 200
Query: 233 YVKNREVGFARELFDFM-----------------------PERDI--------FT----- 256
G E++D E +I FT
Sbjct: 201 IA---HFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGM 257
Query: 257 ------WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
N+ +S Y GD E A+ F+ M DV+SW MI ++ GNV AR+ F+R
Sbjct: 258 NSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNR 317
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RNV+SWN +L Y + + E L+L+ M+R + +P+ + ++++ AC+ + + +G
Sbjct: 318 MPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLG 377
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
I S K + DV + S +T+Y++CG ++ A+N+FD++ EKN++SWNS++ GY +
Sbjct: 378 TQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQN 437
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+G K +E+F M G P+ T+I +LS C+H+G+V E ++F+ M + + I +EH
Sbjct: 438 GEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEH 497
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
+ CMVDL GRAGL++ + +++ ++P + ++WGALLSAC H ++E+ ++ ++L+EL
Sbjct: 498 FVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELN 557
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ Y+LL+N Y+S G+ + V +R++MKEK ++K G S +
Sbjct: 558 TENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWI 601
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 70/367 (19%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + +R ++H K GF + ++NS+I MY C + A +VF L +W
Sbjct: 3 CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVG------------------ 268
N MI GY K E+G A + F MPERD +WN++IS + G
Sbjct: 63 NCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQ 122
Query: 269 --------DMEAANGLFDLM-------------PFRDVVSWNCMIDGYAKIGNVTSARNC 307
+ A ++D PF DV+ N ++D YAK G + +++
Sbjct: 123 PNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRV 182
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+ + NVV+W L++ E +F +M + + L ++L C I
Sbjct: 183 FNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNI 242
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC---------------------------- 399
IG+ +H + K + V + + L+MYAKC
Sbjct: 243 SIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSF 302
Query: 400 ---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
G ++ AR+ F+ M E+NV+SWN+M+ Y + E+ L++++ M ++ P+ TF+
Sbjct: 303 SHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFV 362
Query: 457 CVLSACT 463
++ AC+
Sbjct: 363 TMIGACS 369
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF---------- 409
AC+++G I I +H +K + ++ S++ MY KC + A VF
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 410 ---------------------DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
M E++ VSWN++I + HG ++L F+EM +G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRD 506
PN T+ VLSAC + + + W L RI ++EP ++ +VD+ + GL+
Sbjct: 122 QPNSMTYASVLSACAN---IYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDA 178
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSE 537
S+ + + L E W +L+S + + E
Sbjct: 179 SKRVFNTLR-EHNVVTWTSLISGIAHFGSQE 208
>gi|147784564|emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
Length = 1302
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 259/478 (54%), Gaps = 33/478 (6%)
Query: 125 NTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIV 184
N ++K + +P A+ Y E F N +TFP+L K + + S G +H + +
Sbjct: 827 NRVIKRRVSQGNPDQAILAYVEMKRVGFHADN-FTFPVLLKAASSLSSCCIGFALHGQAM 885
Query: 185 KCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
K GF FV +L+ MY G + A KVFE+ V D+V WNSM+ Y ++ A +
Sbjct: 886 KTGFSGHCFVGTALLDMYXAFGAIDHATKVFEEMGVKDVVVWNSMLAAYASXGQMDNAMK 945
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
LFD MP +D+ ++N MISGY +G AA +FD + +D+VSWN MI +G++ +A
Sbjct: 946 LFDNMPLKDLASFNIMISGYAKIGRKAAARSIFDRIHAKDIVSWNSMILACTNVGDMGNA 1005
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
RN FD M +N V LFD M G+ + + ++ VL+ACA++
Sbjct: 1006 RNLFDVMPKKNAVD-------------------LFDEMKAGNHEADHLTVALVLSACAHL 1046
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G + G +H Y Q R+ ++TSL+ MYAKCG + + VF K++ WN++I
Sbjct: 1047 GWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDIYCWNAII 1106
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
G +HG G A+++ +M G P++ TFI +LSAC+H +V EG FD M++ + +
Sbjct: 1107 SGLALHGYGHAAVKLLDKMRDNGIRPDEITFIGLLSACSHGSLVQEGCRLFDCMEKEFGL 1166
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV-- 542
PK+EHYGCMVDLLGRAG + + +L+ +P E G ++ GALL AC H + E G+ V
Sbjct: 1167 PPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKVIB 1226
Query: 543 -----AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
A H+ + G +++ N+YAS G+W E R M E + K G S +
Sbjct: 1227 LITSKAHHVSD------GEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIE 1278
>gi|354805242|gb|AER41656.1| CRR4 [Oryza rufipogon]
Length = 752
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 267/515 (51%), Gaps = 74/515 (14%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC------- 205
V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y C
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGG 166
Query: 206 -------------------------------GEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+ A FE P ++V+WN+++ G+
Sbjct: 167 GGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFA 226
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
+ ++ AR +FD MP R+ +WN MISGY GD+EAA +FD M +DVVSW M+
Sbjct: 227 RMGDMVTARAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSA 286
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD-RMIRGDAKPNEAS 353
YAKIG++ +A FD M ++N+VSWN ++ Y Y E LR F M+ G +P+EA+
Sbjct: 287 YAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEAT 346
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
L+SV++ACA +G ++ WI S+I K I V L +L+ M+AKCG + A+++F M
Sbjct: 347 LVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSIFYKME 406
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+ +++W +MI G+ +G AL ++ M + G +D FI L+AC H G++ EGW
Sbjct: 407 TRCIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWS 466
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
F+ M Y I+P++EHYGCMVDLLGRA
Sbjct: 467 IFNEMVERYNIQPRMEHYGCMVDLLGRA-------------------------------- 494
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
EL + V++ + ELEP + VL+SN A EG+WD V + R M+ +EK GSS
Sbjct: 495 ---ELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSS 551
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ G E + ++ R+ +Y + + A M+
Sbjct: 552 IQVGSEVHEFLAKDTRHKRRKEIYETVDGLMALMR 586
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 295/585 (50%), Gaps = 79/585 (13%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL-SQDSFAASRVLKKLCTSLSSV----- 106
I +LSH I + C T+ + +Q+H Q GL S + ++ ++L K+ +L+++
Sbjct: 23 IYNLSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKS 82
Query: 107 SLSVLF-----FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF-VEHNHYTF 160
S S+L FD IQ P F N I++ + + AL F+ + M +F V + +++
Sbjct: 83 SFSLLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQ--MRRFSVPPDFHSY 140
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
P K CA +R L + +H+ +VF+ G V
Sbjct: 141 PFALKACAHLRVLSLAQCLHS-------------------------------QVFKFGFV 169
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
DL NS+I Y LFD + A +FD
Sbjct: 170 SDLYVINSLIHVY----------SLFDCL---------------------NYACQVFDES 198
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC-ECLRLF 339
RDVVS+N ++DG+ K G AR FD M MR+ VSW L+A Y + YC E + LF
Sbjct: 199 SDRDVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQ-GSYCNEAIGLF 257
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
D M+ +P+ +L+S L+ACA +G ++ G+ IH YI+K RI+ D LST L+ YAK
Sbjct: 258 DLMMGLKLEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKS 317
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +D A VF+ +K++++WN+M++G MHG L F M + G P+ +F+ VL
Sbjct: 318 GCIDTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVL 377
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
C+H G+V E FD M+ IY + +++HYGCM DLL RAGL++++ EL LPM
Sbjct: 378 VGCSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGD 437
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+W LL C H N E+ + A+ +MEL+P D G Y +L+N+YA+ +W++V +RR
Sbjct: 438 IFVWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRS 497
Query: 580 MKE-KELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
M + ++K G S + G E + + +Y +L I
Sbjct: 498 MSSNRAVKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVLDGI 542
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 305/549 (55%), Gaps = 30/549 (5%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
++K Q H ++L G +Q+ F A++++ +LS L FD + ++ N+++
Sbjct: 42 SLKLTQQCHARILSLGFTQNPFLATKLISAYAI-FGVPALSRLVFDSLHFKSVYLWNSLI 100
Query: 129 KSFL---MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
F+ N+ FG ++ +M + V + YT + KVC I L GK +H + +K
Sbjct: 101 NGFVKNRAYNEAFG----WFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLK 156
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
GF LD+ V NSL+ MYS CG + K+F++ P ++ +WN ++ GY + + F +E+
Sbjct: 157 TGFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEV 216
Query: 246 FDFMPER-------DIFTWNSMISGYVDVGDMEAANGLFDLMPF-----------RDVVS 287
F+ + D FT +S+++ + G M + +L F +V
Sbjct: 217 SGFVKDMQIEGLKPDAFTVSSLLT--LCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHL 274
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGD 346
C+ID Y++ V R FDRM RNV +W ++ +V+ E L LF M +R
Sbjct: 275 GCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDG 334
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
+PN+ SL+SVL AC+ + + + IH Y + + DV L +L+ MY+KCG +D A+
Sbjct: 335 VEPNKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAK 394
Query: 407 NVFD-NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHA 465
VF+ ++ +SW+SMI GYG+HG+GE+A+ ++ +M + G P+ T + VLSAC+ A
Sbjct: 395 QVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRA 454
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G+V EG + Y+I+P VE C+VD+LGR+G + + + + +PME P++WGA
Sbjct: 455 GLVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGA 514
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
++SA H NSE+ + + L++LEP +P YV LSN++AS +WD V +R +MK++ L
Sbjct: 515 VVSASIIHGNSEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVRTMMKDRCL 574
Query: 586 EKAVGSSLV 594
K G S +
Sbjct: 575 TKTPGCSWI 583
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 186/401 (46%), Gaps = 28/401 (6%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+SL+ ++ HARI+ GF + F+ LI Y++ G +R VF+ + WNS+I
Sbjct: 41 KSLKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLI 100
Query: 231 DGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGL----FDLMPF 282
+G+VKNR A F M R D +T +M ++GD+ A +
Sbjct: 101 NGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFV 160
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
DV+ N ++ Y+K G FD M RNV SWN++L+ Y D R FD+
Sbjct: 161 LDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGD-----RNFDKE 215
Query: 343 IRG--------DAKPNEASLMSVLTAC-ANMGVIDIGQWIHSYIQKCRIK----PDVLLS 389
+ G KP+ ++ S+LT C +MG D G+ +H +I + + +V L
Sbjct: 216 VSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLG 275
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR-GP 448
L+ MY++ +D+ R VFD M +NV +W +MI G+ +G E+ L +F EM+ R G
Sbjct: 276 CCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGV 335
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
PN + + VL AC+ A L G + V ++D+ + G + ++
Sbjct: 336 EPNKVSLVSVLPACS-AVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAK 394
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
++ P W +++S H E V +++L
Sbjct: 395 QVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQL 435
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ + Q H+ I + L+T L++ YA GV L+R VFD++ K+V WNS+I G
Sbjct: 43 LKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLING 102
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC-----THAGMVLEGWWYFDLMQRI 481
+ + +A F +M RG +D T + C +AG ++ G ++
Sbjct: 103 FVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHG----KSLKTG 158
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+ ++ V + ++ + + G + +L ++P E W +LS + + K
Sbjct: 159 FVLDVIVAN--SLMSMYSKCGGFGECLKLFDEMP-ERNVGSWNVILSGYADSGDRNFDKE 215
Query: 542 VAQHL--MELEPRDPGPYV---LLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL-VH 595
V+ + M++E P + LL+ GK D L + EL AVGS VH
Sbjct: 216 VSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIEL--AVGSGTEVH 273
Query: 596 PG 597
G
Sbjct: 274 LG 275
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 306/584 (52%), Gaps = 80/584 (13%)
Query: 63 KLESCSTVKEFHQ--IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+++S S K+ H I TQ L S ++ ++ + T+L + ++L F ++ P
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSL-------SHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-------NHYTFPLLGKVCAGIRSL 173
++++ F + + K +A FVE +H FP + K C + L
Sbjct: 70 VLAWKSVIRCFTDQS--------LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYS---------VCGEVLD-------------- 210
R G+ VH IV+ G + DL+ N+L++MY+ G V D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 211 -------------ARKVFEDGPVWDLVTWNSMIDGYVKN----------REVGFARELFD 247
R+VFE P D+V++N++I GY ++ RE+G D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT----D 237
Query: 248 FMPERDIFTWNSMI---SGYVDVGDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTS 303
P D FT +S++ S YVDV + +G DV + ++D YAK +
Sbjct: 238 LKP--DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 295
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
+ F R+ R+ +SWN L+A YV+ Y E LRLF +M+ KP + SV+ ACA+
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ + +G+ +H Y+ + ++ ++++L+ MY+KCG + AR +FD M + VSW ++
Sbjct: 356 LATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAI 415
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
IMG+ +HG G +A+ +F EM+++G PN F+ VL+AC+H G+V E W YF+ M ++Y
Sbjct: 416 IMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYG 475
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+ ++EHY + DLLGRAG + ++ +SK+ +E ++W LLS+CS H N EL + VA
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVA 535
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+ + ++ + G YVL+ N+YAS G+W E+ LR M++K L K
Sbjct: 536 EKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
>gi|357131531|ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 531
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/443 (35%), Positives = 255/443 (57%), Gaps = 1/443 (0%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDA 211
V +H++ P A + R G +HA + L V N+L+ +Y+ C + A
Sbjct: 77 VSPDHFSLPFALNAAASLGLFRFGASLHALAFRLALVPARLPVANALVDLYAKCDALPAA 136
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
P D V++NS++ + + V A LF MP R +WN+M+ YV+ GD
Sbjct: 137 HAALASIPAPDAVSFNSLLCAHARLASVPAAESLFTSMPSRTQVSWNAMVVVYVNAGDFA 196
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+A +FD MP RD SW+ +I GY K G++ SAR FD+M +N+V+W ++ Y +C
Sbjct: 197 SARLVFDEMPTRDSSSWSVLIVGYCKRGSMQSARELFDKMPGKNLVTWTAMINGYAQCGR 256
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E + LF + +P+ A+++ V+++ + +G + W+ +Y+ + RI+ + + T+
Sbjct: 257 PKESISLFRELEAVGIEPDAATMVGVISSASQIGSTALAGWVGNYVDRKRIERNEKVLTA 316
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ M+AKCG ++ A N F + + + + ++I G HG AL++F M + P+
Sbjct: 317 LVDMHAKCGNVEQALNCFREIEQPDAYPYTALISGLATHGHSTLALQVFERMRAQAVRPD 376
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
TF+ VL+AC+HAG+V G Y++ M + Y ++ + +HY C+VD+LGRAG + ++ ++V
Sbjct: 377 PITFVGVLTACSHAGLVDMGLDYWEAMVQDYGMDRRADHYACVVDMLGRAGRIVEAFDMV 436
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+PM P GALLSAC TH N E+ +IVA L ELEPR+ G Y+LLSNIYA + +W+
Sbjct: 437 QTMPMGPHPGALGALLSACKTHDNVEIAEIVANKLFELEPRNTGNYILLSNIYAGKEQWE 496
Query: 572 EVENLRRIMKEKELEKAVGSSLV 594
E E +R +M+ K K GS+ V
Sbjct: 497 EAERIRSLMRTKLPFKQPGSTWV 519
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 278/525 (52%), Gaps = 41/525 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI--QEPDAFMCNTIMKSFL 132
Q+ QLLV GL + AA + + +S S +F + + ++ + ++
Sbjct: 31 QLQAQLLVRGLPLPARAA---VALIASSHSPRHARAVFDSAVPAASENVYLWTATIAAYA 87
Query: 133 M-----LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
L+ GAL+ + + N +T + + C+ +R++REG +VH + G
Sbjct: 88 RHASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVVRCCSALRAVREGIQVHGFLFSAG 147
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
V +L+ MY G V DAR+V FD
Sbjct: 148 LGRASHVGAALVDMYGSLGRVADARRV-------------------------------FD 176
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
MP ++ N+M++ YV GD+EA +FD M RD +SWN ++ GY + G AR+
Sbjct: 177 EMPSTNVVLGNTMVACYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDL 236
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+ M RNV SWN+++A + + + + +F+RM +P+ A++ +++ACA +G +
Sbjct: 237 FEEMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRLARFQPDPATMAVLMSACAQLGSL 296
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
I +H ++K ++ + + SL+ MYAKCG + A +F K+ VS+N MI
Sbjct: 297 SIASQVHGILRKGCVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICAL 356
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG G AL++F EM + G P+ TF+ VLSAC HAG+V +G +YF+ M+ Y IE
Sbjct: 357 AQHGHGRDALQIFDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQS 416
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+HY CMVDL GRAGL+ ++ +L +P++ +WGAL++AC H N E+GK+ A+ L+
Sbjct: 417 PDHYACMVDLYGRAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAARELI 476
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+EP +PG YVLL+N A +WD VE + + M+ K +EK G S
Sbjct: 477 AIEPGNPGTYVLLANTLARGQQWDFVETVWQSMRGKGIEKTAGCS 521
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 275/547 (50%), Gaps = 110/547 (20%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF L K+CA L G+ VHA++ G + + +L +MY+ C DAR+VF+
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD------------------------- 253
PV D V WN+++ GY +N A E+ M E +
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 254 ---------------IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ +++ Y GD+ AA +FD MP ++ VSWN MIDGYA+
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 299 GNVTSARNCFDRMC---------------------------MR------------NVVSW 319
G+ A F+RM MR NV
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 320 NILLALYVRCK-----------------------------DYC--ECLRLFDRMIRGDAK 348
N L+ +Y +CK + C + +RLF RM + K
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ +L+SV+ A A++ +WIH Y + + DV + T+L+ MYAKCG +++AR +
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F++ E++V++WN+MI GYG HG G+ A+E+F EM+ G PN+ TF+ VLSAC+HAG+V
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M+ Y +EP +EHYG MVDLLGRAG + ++ + K+PM+ G +++GA+L
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N EL + AQ + EL P++ +VLL+NIYA+ W +V +R M++ L+K
Sbjct: 541 ACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKT 600
Query: 589 VGSSLVH 595
G S++
Sbjct: 601 PGWSIIQ 607
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
D L F M A P + S+L CA G + G+ +H+ + I + L +T
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPT 449
+L MYAKC AR VFD M ++ V+WN+++ GY +G A+EM + M E+ G
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 450 PNDATFICVL 459
P+ T + VL
Sbjct: 159 PDSITLVSVL 168
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 291/528 (55%), Gaps = 10/528 (1%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH L+ SG S D FA + L+ + V + FD + E D NTI+ +
Sbjct: 156 EIHGLLVKSGFSLDLFAMTG-LENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
AL M + ++ + T + + +R +R GK++H ++ GF+ + +
Sbjct: 215 GMARMALEMV-NLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNI 273
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
+L+ MY+ CG + AR +F+ ++V+WNSMID YV+N A +F M + +
Sbjct: 274 ATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGV 333
Query: 255 FTWNSMISGYV----DVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
+ + G + D+GD+E + +L R+V N +I Y K V +A +
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
F ++ R +VSWN ++ + + E L F +M KP+ + +SV+TA A + +
Sbjct: 394 MFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSI 453
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+WIH + + + +V ++T+L+ MYAKCG + +AR +FD M+E++V +WN+MI G
Sbjct: 454 THHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
YG HG G+ ALE+F EM+K PN TF+ V+SAC+H+G+V G F +M+ Y IEP
Sbjct: 514 YGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEP 573
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
++HYG MVDLLGRAG + ++ + + ++P++ ++GA+L AC H N + VA+ L
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERL 633
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EL P D G +VLL+NIY + W++V +R M + L K G S+V
Sbjct: 634 FELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 268/525 (51%), Gaps = 17/525 (3%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
+P HP LE CS++KE I + +GL Q+ ++++ C SV +
Sbjct: 31 IPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFC-RYGSVDEAA 89
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
F+ I + + T++K F ++D AL F+ +M VE Y F L KVC
Sbjct: 90 RVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFV-RMRDDEVEPVVYNFTYLLKVCGDE 148
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
LR GK++H +VK GF LDLF L +MY+ C +V +ARKVF+ P DLV+WN+++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIV 208
Query: 231 DGYVKNREVGFARELFDFMPERDIF-TWNSMISGYVDVGDM------EAANGLFDLMPFR 283
GY +N A E+ + M E ++ ++ +++S V + + +G F
Sbjct: 209 AGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFD 268
Query: 284 DVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+V+ ++D YAK G++ +AR FD M RNVVSWN ++ YV+ ++ E + +F +M
Sbjct: 269 SLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKM 328
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ KP + S+M L ACA++G ++ G++IH + + +V + SL++MY KC +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEV 388
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
D A ++F + + +VSWN+MI+G+ +G+ +AL F +M+ R P+ T++ V++A
Sbjct: 389 DTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAI 448
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+ W ++ R ++ V +VD+ + G + + L+ + E
Sbjct: 449 AELSITHHAKWIHGVVMR-NCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTT 506
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRD--PGPYVLLSNIYA 565
W A++ TH +GK + E++ P LS I A
Sbjct: 507 WNAMIDGYGTHG---IGKAALELFEEMQKGTIRPNGVTFLSVISA 548
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 143/318 (44%), Gaps = 10/318 (3%)
Query: 274 NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
NGL+ F+ ++ + + G+V A F+ + + V + +L + + D
Sbjct: 63 NGLYQEHLFQ-----TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLD 117
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ L+ F RM + +P + +L C + + +G+ IH + K D+ T L
Sbjct: 118 KALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MYAKC + AR VFD M E+++VSWN+++ GY +G ALEM M + P+
Sbjct: 178 NMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFI 237
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
T + VL A + ++ G R + V +VD+ + G ++ + L
Sbjct: 238 TIVSVLPAVSALRLIRIGKEIHGYAMRA-GFDSLVNIATALVDMYAKCGSLKTARLLFDG 296
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE--GKWD 571
+ +E W +++ A + N + ++ Q +++ E P ++ ++A G +
Sbjct: 297 M-LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLD-EGVKPTDVSVMGALHACADLGDLE 354
Query: 572 EVENLRRIMKEKELEKAV 589
+ ++ E EL++ V
Sbjct: 355 RGRFIHKLSVELELDRNV 372
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 301/547 (55%), Gaps = 13/547 (2%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L++C++ ++ +I + + G+ ++ F S ++ L + + FDG+ D
Sbjct: 137 LKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFL-VKFGKIGEAQRVFDGMPNKD 195
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
N+I+ ++ A ++E M ++ + T L + C GI +L+ GK +H
Sbjct: 196 VVCWNSIIGGYVQAGCFDVAFQLFFE-MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMH 254
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
++ G D+ V S + MYS G++ AR VF P +LV+WN+MI G V+N VG
Sbjct: 255 GYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVG 314
Query: 241 FARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFD--LMPFR-DVVSWNCMID 293
+ +LF + D+ T S++ G + L + F +++ ++D
Sbjct: 315 ESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVD 374
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
Y+K G++ A F+RM RNV++W +L + + LRLF +M N +
Sbjct: 375 LYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVT 434
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+S++ +CA++G + G+ IH ++ + D++ T+L+ MYAKCG ++LA +F + +
Sbjct: 435 FVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGS 494
Query: 414 -EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
K+VV WNSMI GYGMHG G +A+ ++ +M + G PN TF+ +LSAC+H+ +V +G
Sbjct: 495 ISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGI 554
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
F+ M+R + I P +HY C+VDLL RAG +++ L+ K+P + G A+ ALLS C T
Sbjct: 555 SLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRT 614
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N LG + L+ L+ +PG Y++LSNIYA +WD+V+ +R +M+ + L+K G S
Sbjct: 615 HKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYS 674
Query: 593 LVHPGEF 599
LV G +
Sbjct: 675 LVETGNW 681
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/624 (24%), Positives = 283/624 (45%), Gaps = 49/624 (7%)
Query: 30 TPPKLWANEPKPK---FTDTDNQRLPIVDLSHPILQKL-ESCSTVKEFHQIHTQLLVSGL 85
+P AN+P D +LP + H L L ES + H Q++ + L
Sbjct: 3 SPFHFIANKPFSTCNPLKDGQFNQLPTI--IHNFLSLLRESSKNLIWVKSTHAQIITNSL 60
Query: 86 SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYY 145
S D F A++++K + L S+ + FD +P +CN ++ +L L +
Sbjct: 61 STDQFVATKLVKAY-SDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLEL-F 118
Query: 146 EKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC 205
M ++ +E + + K CA G ++ + V+ G E + FV +S+I
Sbjct: 119 GLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKF 178
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMI 261
G++ +A++VF+ P D+V WNS+I GYV+ A +LF M I T S+I
Sbjct: 179 GKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLI 238
Query: 262 SGYVDVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+G+++ + L D++ +D Y+K+G++ SAR F +M RN+V
Sbjct: 239 QACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLV 298
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SWN +++ VR E LF R++R + +++S+L C+ + G+ +H
Sbjct: 299 SWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHG-- 356
Query: 378 QKCRIK---PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
C I+ +++LST+++ +Y+KCG + A VF+ M ++NV++W +M++G +G E
Sbjct: 357 --CAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAE 414
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
AL +F +M++ G N TF+ ++ +C H G + G + R+ + + +
Sbjct: 415 DALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL-GFAFDIVNMTAL 473
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME--LEPR 552
VD+ + G + +E + S + LW ++++ H + + ++E L+P
Sbjct: 474 VDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPN 533
Query: 553 DPGPYVLLS----------------------NIYASEGKWD-EVENLRRIMKEKELEKAV 589
LLS NI E + V+ L R + +E + +
Sbjct: 534 QTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALI 593
Query: 590 GSSLVHPGEFASESIVENCPPHRK 613
PG E+++ C H+
Sbjct: 594 EKMPFQPGTAVLEALLSGCRTHKN 617
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 316/580 (54%), Gaps = 16/580 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL+ + + V+E Q+H + G + + + ++ V + FD + +
Sbjct: 257 ILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVG-RKVRCAQKLFDELTDR 315
Query: 120 DAFMCNTIMKSFLMLN-DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
D N+++ ++ D G F KM+ V+ + T + CA I +L GK
Sbjct: 316 DVISWNSMISGYVKNGLDDRGIEIFI--KMLVFGVDIDLATMVNVFVACANIGTLLLGKV 373
Query: 179 VHARIVKCGFELDLFVR--NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+H+ +K LD VR N+L+ MYS CG++ A +VFE +V+W SMI GYV+
Sbjct: 374 LHSYSIKAA-TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE 432
Query: 237 REVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS----W 288
A +LFD M R D++ S+++ G++++ + D + ++ +
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N + D YAK G++ A + F M ++V+SWN ++ Y + E L LF M R ++K
Sbjct: 493 NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR-ESK 551
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ ++ +L ACA++ +D G+ IH Y + D ++ +++ MY KCG++ LAR++
Sbjct: 552 PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSL 611
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD + K++VSW MI GYGMHG G +A+ F +M G P++ +FI +L AC+H+G++
Sbjct: 612 FDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLL 671
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EGW F++M++ +IEP +EHY CMVDLL R G + + + + +P++ +WGALL
Sbjct: 672 DEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLC 731
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
C H + +L + VA+ + ELEP + G YVLL+NIYA KW+EV+ LR+ + ++ L+K
Sbjct: 732 GCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKN 791
Query: 589 VGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G S + + + +C + + +L + ++MK
Sbjct: 792 PGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMK 831
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 236/485 (48%), Gaps = 18/485 (3%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FD + E F+ N ++ + + +G +++M+ ++ N YTF + K A +
Sbjct: 206 MVFDKLSESKIFLWNLMISEYSGSGN-YGESINLFKQMLELGIKPNSYTFSSILKCFAAV 264
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+ EG++VH I K GF V NSLI Y V +V A+K+F++ D+++WNSMI
Sbjct: 265 ARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMI 324
Query: 231 DGYVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL-----MP 281
GYVKN R + ++ F + D+ T ++ ++G + L
Sbjct: 325 SGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATL 384
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
R+V N ++D Y+K G++ SA F+RM + VVSW ++ YVR ++LFD
Sbjct: 385 DREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDE 444
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M P+ ++ S+L ACA G + G+ +H YI++ ++ + +S +L MYAKCG
Sbjct: 445 MKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGS 504
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
M A +VF +M +K+V+SWN+MI GY + +AL +F EM+ R P+ T C+L A
Sbjct: 505 MKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQ-RESKPDGTTVACILPA 563
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C + +G R E K +VD+ + GL+ + L +P
Sbjct: 564 CASLAALDKGREIHGYALRNGYSEDKYVT-NAVVDMYVKCGLLVLARSLFDMIP-NKDLV 621
Query: 522 LWGALLSACSTHS-NSELGKIVAQHLMELEPRDPGPYVLLSNIYA--SEGKWDEVENLRR 578
W +++ H SE Q M + +P +S +YA G DE +
Sbjct: 622 SWTVMIAGYGMHGYGSEAINTFNQ--MRMTGIEPDEVSFISILYACSHSGLLDEGWKIFN 679
Query: 579 IMKEK 583
IMK++
Sbjct: 680 IMKKE 684
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 159/346 (45%), Gaps = 46/346 (13%)
Query: 285 VVSWNCMIDG---------YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+ S MIDG Y K G++ R FD++ + WN++++ Y +Y E
Sbjct: 176 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 235
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+ LF +M+ KPN + S+L A + ++ G+ +H I K + SL++
Sbjct: 236 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 295
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y + A+ +FD +T+++V+SWNSMI GY +G ++ +E+F++M G + AT
Sbjct: 296 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 355
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR---------D 506
+ V AC + G +L G + ++ +V ++D+ + G + D
Sbjct: 356 VNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD 415
Query: 507 SEELVSKLPMEAG-----------------------PALWG--ALLSACSTHSNSELGKI 541
+ +VS M G P ++ ++L+AC+ + N + GKI
Sbjct: 416 EKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKI 475
Query: 542 VAQHLMELEPRDPGPYV--LLSNIYASEGKWDEVENLRRIMKEKEL 585
V ++ E + +V L+++YA G + ++ MK+K++
Sbjct: 476 VHDYIRE-NNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDV 520
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%)
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
S+L CA I G+ + S I+ + D +L L+ MY KCG + R VFD ++E
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES 214
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ WN MI Y G +++ +F +M + G PN TF +L V EG
Sbjct: 215 KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 314/587 (53%), Gaps = 32/587 (5%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFFDGIQ 117
+L L S ++ Q+H ++ +G +F + ++ C L S V + FD +
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALI---CMYLKSEMVGDAEAVFDSMV 267
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYE------KMMAKFVEHNHYTFPLLGKVCAGIR 171
D+ N ++ + A+ FY E +M V+ + F K+C+ R
Sbjct: 268 VRDSVTWNIMIGGY-------AAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DGPVWDLVTWNSMI 230
L K++H +VK G+E +R +L+ YS C V +A K+F ++VTW +MI
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMI 380
Query: 231 DGYVKNREVGFARELFDFMPERDI----FTWNSMISG----YVDVGDMEAANGLFDLMPF 282
G+V+N A +LF M + FT++++++G + + ++ +P
Sbjct: 381 GGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP- 439
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
++D Y K GNV + F + +++V+W+ +L + +D + + +F ++
Sbjct: 440 ---SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQL 496
Query: 343 IRGDAKPNEASLMSVLTACAN-MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
++ KPNE + SV+ AC++ ++ G+ IH+ K + +S++LLTMY+K G
Sbjct: 497 VKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGN 556
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
++ A VF E+++VSWNSMI GYG HG +KALE+F M+ +G +D TFI VL+A
Sbjct: 557 IESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTA 616
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
CTHAG+V EG YF++M + Y I+ K EHY CMVDL RAG+ + ++++ +P A P
Sbjct: 617 CTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPT 676
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+W LL+AC H N ELGK+ A+ L+ L+P D YVLLSNI+A G W+E ++R++M
Sbjct: 677 IWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMD 736
Query: 582 EKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E++++K G S + + + +VY+ L E+ ++K
Sbjct: 737 ERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLK 783
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 196/432 (45%), Gaps = 32/432 (7%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
KVC + G++VH + +K GF D+ V SL+ MY + D R +F++ + ++V
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERDI-------FTW---------NSMISGYVDVG 268
+W S++ GY +N G E+ + + + FT+ S+I G V V
Sbjct: 172 SWTSLLSGYARN---GLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVH 228
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
M NG F+ F N +I Y K V A FD M +R+ V+WNI++ Y
Sbjct: 229 AMIVKNG-FEFTTF----VCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAA 283
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
Y E ++F RM K + + L C+ ++ + +H + K + +
Sbjct: 284 IGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDI 343
Query: 389 STSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
T+L+ Y+KC +D A +F NVV+W +MI G+ + +KA+++F +M + G
Sbjct: 344 RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREG 403
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN T+ VL+ + L + +++ Y+ P V ++D + G + +S
Sbjct: 404 VRPNHFTYSTVLAGKPSS---LLSQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVES 458
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+ +P + A W A+L+ + +SE V L++ E P Y S I A
Sbjct: 459 ARVFYSIPAKDIVA-WSAMLTGLAQTRDSEKAMEVFIQLVK-EGVKPNEYTFSSVINACS 516
Query: 568 GKWDEVENLRRI 579
VE+ ++I
Sbjct: 517 SSAATVEHGKQI 528
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM 270
A ++F++ P+ D+ +N ++ + +N A LF +D+ + + G +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLF-----KDLHSSGLGVDGLTLSCAL 111
Query: 271 EAANGLFDLMPFR-------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+ LFD + R DV ++D Y K + R FD M ++NVV
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
SW LL+ Y R E + L ++M PN + +VL A A+ +I+ G +H+ I
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMI 231
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K + + +L+ MY K ++ A VFD+M ++ V+WN MI GY G +
Sbjct: 232 VKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGF 291
Query: 438 EMFMEMEKRGPTPNDATFICVLSACT-----------HAGMVLEGWWY 474
+MF M G + F L C+ H G+V G+ +
Sbjct: 292 QMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 258/470 (54%), Gaps = 45/470 (9%)
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
G+ L+ G +VHA ++ G + V + ++ Y+ G++ + VF + +NS
Sbjct: 82 GLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNS 141
Query: 229 MIDGYVK----NREV---------GFARELFDFMP------------------------- 250
MI Y + R V GF + F F P
Sbjct: 142 MIRAYARYGFAERTVATYFSMHSWGFTGDYFTF-PFVLKSSVELLSVWMGKCVHGLILRI 200
Query: 251 --ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+ D++ S+I Y G++ A +FD M RDV SWN ++ GY K G + +A F
Sbjct: 201 GLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIF 260
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA--KPNEASLMSVLTACANMGV 366
+RM RN+VSW +++ Y + + L LFD M++ D+ +PN ++MSVL ACA +
Sbjct: 261 ERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST 320
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD--NMTEKNVVSWNSMI 424
++ G+ IH + + + + +L MYAKCG + ARN FD N EKN+++WN+MI
Sbjct: 321 LERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMI 380
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
Y +G G +A+ F EM + G P+D TF +LS C+H+G+V G YF+ M Y I
Sbjct: 381 TAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSI 440
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
P+VEHY C+ DLLGRAG + ++ +LV ++PM AGP++WG+LL+AC H N E+ + A+
Sbjct: 441 NPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAAR 500
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L LEP + G YVLLSN+YA G+W EV+ LR I+K + +K+ G S +
Sbjct: 501 KLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWI 550
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 229/496 (46%), Gaps = 54/496 (10%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
PI+ + P+ Q L + +K HQ+H +L+ GL + S+++ +S + SV
Sbjct: 69 PILSYA-PVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASS-GDIDSSVS 126
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
F+GI EP + + N++++++ ++ Y+ F +++TFP + K +
Sbjct: 127 VFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTG-DYFTFPFVLKSSVELL 185
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
S+ GK VH I++ G + DL+V SLI +Y CGE+ DA KVF++ + D+ +WN+++
Sbjct: 186 SVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLA 245
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD------------- 278
GY K+ + A +F+ MP R+I +W +MISGY G + A LFD
Sbjct: 246 GYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 305
Query: 279 -----LMPF----------RDVVSWNC-------------MIDGYAKIGNVTSARNCFDR 310
++P R + C + YAK G++ ARNCFD+
Sbjct: 306 VTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDK 365
Query: 311 MCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ +N+++WN ++ Y + + F MI+ +P++ + +L+ C++ G++D
Sbjct: 366 LNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVD 425
Query: 369 IG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS-WNSMIMG 426
+G ++ + I P V + + + G + A + M S W S++
Sbjct: 426 VGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
H E A ++ P N ++ + + AG W D ++ I K +
Sbjct: 486 CRKHRNLEMAETAARKLFVLEPE-NTGNYVLLSNMYAEAGR----WQEVDKLRAIVKSQG 540
Query: 487 KVEHYGCM-VDLLGRA 501
+ GC +++ G+A
Sbjct: 541 TKKSPGCSWIEINGKA 556
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P S V + ++ +G +H+++ ++P L+ + ++ YA G +D + +V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ + E + + +NSMI Y +G E+ + + M G T + TF VL + V
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
G L+ RI ++ + ++ L G+ G + D+ ++ + + + W ALL+
Sbjct: 188 WMGKCVHGLILRI-GLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSS-WNALLA 245
Query: 529 A 529
Sbjct: 246 G 246
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 291/557 (52%), Gaps = 12/557 (2%)
Query: 81 LVSGLSQDSFAASRVLKKLCT-SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFG 139
+V+G D F S ++ C S V+ + FDG+ E D + NT M S L+ N F
Sbjct: 133 IVAGFGSDLFVGSAIVA--CYFKFSRVAAARKVFDGMLERDTVLWNT-MVSGLVKNSCFD 189
Query: 140 ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
+ M+ + + T + A ++ L G + +K GF +V L
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNS 259
+YS CGE+ AR +F DLV++N+MI GY N E + LF + +S
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSS 309
Query: 260 MISGYVDV----GDMEAANGLFDL----MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
I G + V G + + + + Y+++ + SAR FD
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
+++ SWN +++ Y + + + LF M + + +PN ++ S+L+ACA +G + +G+
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
W+H I + + ++ +ST+L+ MYAKCG + A+ +F M EKN V+WN+MI GYG+HG
Sbjct: 430 WVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHG 489
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
G +AL +F EM +P TF+ VL AC+HAG+V EG F M + EP EHY
Sbjct: 490 YGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHY 549
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
CMVDLLGRAG + + + + K+P+E GP +WGALL AC H ++ L ++ + L EL+P
Sbjct: 550 ACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDP 609
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH 611
++ G YVLLSNIY++ + E ++R ++K ++L K G +L+ +
Sbjct: 610 QNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHP 669
Query: 612 RKCIVYSMLGEIGAQMK 628
+ +Y+ML ++ +M+
Sbjct: 670 QATAIYAMLEKLTGKMR 686
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 158/574 (27%), Positives = 272/574 (47%), Gaps = 37/574 (6%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L + ST+ + +Q H Q++++GL D +++ KL + L ++ + L F I PD
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKL-SHLKAIDQASLLFSTIPNPD 72
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F+ N ++++F + N P A+S Y + +E +++T+ V +G SL G +H
Sbjct: 73 LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAF---VISGASSLGLGLLLH 129
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A + GF DLFV ++++ Y V ARKVF+ D V WN+M+ G VKN
Sbjct: 130 AHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFD 189
Query: 241 FARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG-- 294
A +F M + D T +++ G ++ D+ G+ L S +I G
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249
Query: 295 --YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
Y+K G + +AR F ++ ++VS+N +++ Y + +RLF ++ K N +
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSS 309
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
S++ ++ G + + + IH + K + + +ST+L T+Y++ ++ AR +FD
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+EK++ SWN+MI GY +G EKA+ +F EM+K PN T +LSAC G + G
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
W DL+ R E + ++D+ + G + +++ L S +P E W A++S
Sbjct: 430 WVHDLINR-ESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGL 487
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA--SEGKWDEVENLRRIMKEKELEKAVG 590
H + ++ P LS +YA G E + + R
Sbjct: 488 HGYGHEALNLFNEMLH-SRVSPTGVTFLSVLYACSHAGLVREGDEIFR------------ 534
Query: 591 SSLVHPGEFASESIVENCPPHRKCIVYSMLGEIG 624
S+VH F E P H C+V +LG G
Sbjct: 535 -SMVHDHGF------EPLPEHYACMV-DLLGRAG 560
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 294/558 (52%), Gaps = 43/558 (7%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD +QE D ++ + +L + EKM + V + + CA +
Sbjct: 214 FLFDKMQERDLVTWTVMIGGYAECGKANESLVLF-EKMREEGVVPDKVAMVTVVFACAKL 272
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
++ + + + I + F+LD+ + ++I MY+ CG V AR++F+ ++++W++MI
Sbjct: 273 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 332
Query: 231 DGYVKNREVGFARELFDFM------PER-------------------------------- 252
Y + + A +LF M P++
Sbjct: 333 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGML 392
Query: 253 -DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
++ N ++ Y ++ A GLFD M RD VSW+ M+ G+AK+G+ + F +
Sbjct: 393 QNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 452
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
N L C + E L LFD+M P++ ++++V+ ACA +G + +
Sbjct: 453 IRCGARPDNYTLPF---CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 509
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
I YIQ+ + + DV+L T+++ M+AKCG ++ AR +FD M EKNV+SW++MI YG HG
Sbjct: 510 TIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHG 569
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHY 491
QG KAL++F M + G PN T + +L AC+HAG+V EG +F LM Y + V+HY
Sbjct: 570 QGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHY 629
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP 551
C+VDLLGRAG + ++ +L+ + +E LWGA L AC TH + L + A L+EL+P
Sbjct: 630 TCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQP 689
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPH 611
++PG Y+LLSNIYA+ G+W++V R +M ++ L+K G + + + + V +
Sbjct: 690 QNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHP 749
Query: 612 RKCIVYSMLGEIGAQMKM 629
R +Y ML +G ++++
Sbjct: 750 RSKEIYEMLKSLGNKLEL 767
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 160/296 (54%), Gaps = 21/296 (7%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
R+L + ++VHA+ G ++ V N LI+ YS + DA +F+ V D V+W+ M+
Sbjct: 92 RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 151
Query: 231 DGYVKNRE----VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
G+ K + G REL D +T +I D+ +++ A
Sbjct: 152 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMA------------- 198
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
++D Y K + AR FD+M R++V+W +++ Y C E L LF++M
Sbjct: 199 ----LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
P++ ++++V+ ACA +G + + I YIQ+ + + DV+L T+++ MYAKCG ++ AR
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 314
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+FD M EKNV+SW++MI YG HGQG KAL++F M G P+ T +L AC
Sbjct: 315 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 221/513 (43%), Gaps = 61/513 (11%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+ L +C + + Q+H Q V G+ ++ A++++ + ++ + FDG+ D
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIY-FYSYYRALDDAYGLFDGMCVRD 143
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ + ++ F + D + E ++ ++YT P + + C +++L+
Sbjct: 144 SVSWSVMVGGFAKVGDYINCFGTFRE-LIRCGARPDNYTLPFVIRACRDLKNLQM----- 197
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+L+ MY C E+ DAR +F+ DLVTW MI GY + +
Sbjct: 198 ----------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 241
Query: 241 FARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
+ LF+ M E D +++ +G M A + D + + DV+ MI
Sbjct: 242 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMI 301
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
D YAK G V SAR FDRM +NV+SW+ ++A Y + L LF M+ P++
Sbjct: 302 DMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKI 361
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L S+L AC N + + +H+ + +++++ L+ Y+ +D A +FD M
Sbjct: 362 TLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGM 421
Query: 413 TEKNVVSWNSMIMGYG----------------------------MHGQGEKALEMFMEME 444
++ VSW+ M+ G+ G ++L +F +M
Sbjct: 422 CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMR 481
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
+ G P+ + V+ AC G + + D +QR K + V M+D+ + G +
Sbjct: 482 EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR-KKFQLDVILGTAMIDMHAKCGCV 540
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ E+ ++ E W A+++A H
Sbjct: 541 ESAREIFDRME-EKNVISWSAMIAAYGYHGQGR 572
>gi|334186821|ref|NP_194007.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635615|sp|P0C8Q5.1|PP336_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g22760
gi|332659255|gb|AEE84655.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 578
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 305/568 (53%), Gaps = 41/568 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQ-DSFAASRVL---KKLCTSLSSVSLSVLFFDGIQEP 119
L+ C +++ Q+H QL+V+ + + + L K+ ++ + +L G
Sbjct: 10 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRIL--KGFNGH 67
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D+F +++ FL + F Y M + + + + + C + ++ +GK +
Sbjct: 68 DSFSWGCLVR-FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA+ +K G ++V+ L+ +YS G + A+K F+D + V+WNS++ GY+++ E+
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR +FD +PE+D +WN +IS Y GDM A LF MP + SWN +I GY
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCR 246
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDY-----------------------C--- 333
+ AR FD M +N VSW +++ Y + D C
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Query: 334 -----ECLRLFDRMIRGDA--KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ L+LF +M+ ++ +P+E +L SV++A + +G G W+ SYI + IK D
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD 366
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
LLSTSL+ +Y K G A +F N+ +K+ VS+++MIMG G++G +A +F M ++
Sbjct: 367 LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEK 426
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
PN TF +LSA +H+G+V EG+ F+ M+ + +EP +HYG MVD+LGRAG + +
Sbjct: 427 KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEE 485
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ EL+ +PM+ +WGALL A H+N E G+I H ++LE G L+ IY+S
Sbjct: 486 AYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSS 545
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLV 594
G+WD+ +R +KEK+L K +G S V
Sbjct: 546 VGRWDDARTVRDSIKEKKLCKTLGCSWV 573
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 303/560 (54%), Gaps = 51/560 (9%)
Query: 50 RLPIVDLSHPIL------QKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL 103
R +V +P+L + L+ +K +H+++ ++ ++++ +
Sbjct: 22 RKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAY-AAR 80
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLL 163
L+ FD I E + N +++S+ M N + + M++ +HYT+P +
Sbjct: 81 GEPGLARNVFDVIPERNVIFYNVMIRSY-MNNHLYDDALLVFRDMVSGGFSPDHYTYPCV 139
Query: 164 GKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDL 223
K C+ +LR G ++H + K G +L+LFV N LI +Y CG + +AR V ++
Sbjct: 140 LKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDE------ 193
Query: 224 VTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
M +D+ +WNSM++GY +M+ + L D+
Sbjct: 194 -------------------------MQSKDVVSWNSMVAGYAQ--NMQFDDAL-DICREM 225
Query: 284 DVVSWN---CMIDGYAKIGNVTSARNC------FDRMCMRNVVSWNILLALYVRCKDYCE 334
D V C + TS+ N F + +++VSWN+++++Y++ +
Sbjct: 226 DGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGK 285
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
+ L+ +M + + +P+ + SVL AC ++ + +G+ IH Y+++ ++ P++LL SL+
Sbjct: 286 SVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLID 345
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYA+CG ++ A+ VFD M ++V SW S+I YGM GQG A+ +F EM+ G +P+
Sbjct: 346 MYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIA 405
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
F+ +LSAC+H+G++ EG +YF M YKI P +EH+ C+VDLLGR+G + ++ ++ ++
Sbjct: 406 FVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQM 465
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
PM+ +WGALLS+C +SN ++G + A L++L P + G YVLLSNIYA G+W EV
Sbjct: 466 PMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVT 525
Query: 575 NLRRIMKEKELEKAVGSSLV 594
+R +MK + + K G S V
Sbjct: 526 AIRSLMKRRRIRKMPGISNV 545
>gi|2827553|emb|CAA16561.1| predicted protein [Arabidopsis thaliana]
gi|7269122|emb|CAB79231.1| predicted protein [Arabidopsis thaliana]
Length = 889
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 313/589 (53%), Gaps = 49/589 (8%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQ-DSFAASRVL---KKLCTSLSSVSLSVLFFDGIQEP 119
L+ C +++ Q+H QL+V+ + + + L K+ ++ + +L G
Sbjct: 279 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRIL--KGFNGH 336
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D+F +++ FL + F Y M + + + + + C + ++ +GK +
Sbjct: 337 DSFSWGCLVR-FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 395
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA+ +K G ++V+ L+ +YS G + A+K F+D + V+WNS++ GY+++ E+
Sbjct: 396 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 455
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR +FD +PE+D +WN +IS Y GDM A LF MP + SWN +I GY
Sbjct: 456 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCR 515
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDY-----------------------C--- 333
+ AR FD M +N VSW +++ Y + D C
Sbjct: 516 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 575
Query: 334 -----ECLRLFDRMIRGDA--KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ L+LF +M+ ++ +P+E +L SV++A + +G G W+ SYI + IK D
Sbjct: 576 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD 635
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
LLSTSL+ +Y K G A +F N+ +K+ VS+++MIMG G++G +A +F M ++
Sbjct: 636 LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEK 695
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
PN TF +LSA +H+G+V EG+ F+ M+ + +EP +HYG MVD+LGRAG + +
Sbjct: 696 KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEE 754
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ EL+ +PM+ +WGALL A H+N E G+I H ++LE G L+ IY+S
Sbjct: 755 AYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSS 814
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
G+WD+ +R +KEK+L +VGS L A I++ ++C+
Sbjct: 815 VGRWDDARTVRDSIKEKKL--SVGSFL------AGSKIIDRSSRIKRCL 855
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 275/561 (49%), Gaps = 43/561 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I +PD ++ + A+ +Y + VE + + K CA +R
Sbjct: 33 LFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLR 92
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+ K+VH ++ GF D+ + N+LI MY C AR VFE P D+++W SM
Sbjct: 93 DVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMAS 152
Query: 232 GYVKN----------REVGF-------------------------ARELFDFMPER---- 252
YV R++G RE+ F+
Sbjct: 153 CYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGG 212
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
++F +++++ Y + A +FD M RD VSWN +I Y + F RM
Sbjct: 213 NVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMM 272
Query: 313 MR----NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
N SWN ++ ++ + L + RM KPN+ ++ SVL AC N+ +
Sbjct: 273 SEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLR 332
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ IH YI + D+ +T+L+ MYAKCG ++L+R VF MT+++ VSWN+MI+
Sbjct: 333 GGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATS 392
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
MHG GE+AL +F EM G PN TF VLS C+H+ +V EG FD M R + +EP
Sbjct: 393 MHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDA 452
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+H+ CMVD+L RAG + ++ E + K+P+E WGALL C + N ELG+I A L E
Sbjct: 453 DHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFE 512
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
+E +PG YVLLSNI S W E R++M+++ + K G S + +V +
Sbjct: 513 IESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDK 572
Query: 609 PPHRKCIVYSMLGEIGAQMKM 629
+ +Y L +G +M++
Sbjct: 573 SNDQSDEIYRFLDYMGEKMRI 593
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 172/405 (42%), Gaps = 66/405 (16%)
Query: 198 LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN-REVGFARELFDFMP----ER 252
I +YS G++ AR +F+ P DL TW +I K+ R + + DF E
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 253 DIFTWNSMISGYVDVGD-MEAANGLFDLMPF---RDVVSWNCMIDGYAKIGNVTSARNCF 308
D S+ + D M A D + F DV+ N +ID Y K AR F
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
+ M R+V+SW + + YV C E L F +M +PN ++ S+L AC ++ +
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ +H ++ + + +V +S++L+ MYA C + A+ VFD+M+ ++ VSWN +I Y
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256
Query: 429 M-----------------------------------HGQGEKALEMFMEMEKRGPTPNDA 453
+ +G+ EKALE+ M+ G PN
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316
Query: 454 TFICVLSACTH----------AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
T VL ACT+ G + W++ DL +V + + G
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTT-----------ALVFMYAKCGD 365
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
+ S + S + + W ++ A S H N E ++ + +++
Sbjct: 366 LELSRRVFSMMT-KRDTVSWNTMIIATSMHGNGEEALLLFREMVD 409
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 267/490 (54%), Gaps = 40/490 (8%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y +M+A+ + YTFP L K A S + VHA +VK G + V SL+ Y+
Sbjct: 31 YARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAA 90
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER------------ 252
G+ AR + + V WN++I G+ + R G A F M
Sbjct: 91 GGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSV 150
Query: 253 ----------------------------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
D+ N+++ Y + DME+A LFD M R
Sbjct: 151 LSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRS 210
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
VVSW ++ G ++G V AR+ F RM R+ VSW ++ YV+ + E L +F M
Sbjct: 211 VVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQC 270
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ +E +++SV+TACA +G +++G+W+ Y+ + IK D + +L+ MY+KCG ++
Sbjct: 271 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 330
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A +VF +M ++ +W ++I+G ++G GE+A+EMF M TP++ TFI VL+ACTH
Sbjct: 331 ALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTH 390
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG+V +G +F M+ Y I P V HYGC++DL GRAG + ++ + + ++PM +WG
Sbjct: 391 AGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWG 450
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
LL+AC H NSE+G++V + L++++P + Y LLSNIYA +W++V LR + EK
Sbjct: 451 TLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKG 510
Query: 585 LEKAVGSSLV 594
++K G SL+
Sbjct: 511 IKKEPGCSLI 520
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 15/256 (5%)
Query: 81 LVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGA 140
L G+ S + L T L V + F + E D ++ ++ A
Sbjct: 202 LFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREA 261
Query: 141 LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
L + E M V + +T + CA + +L G+ V + + G ++D FV N+LI
Sbjct: 262 LEMFRE-MQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALID 320
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----PERDIFT 256
MYS CG + A VF+D D TW ++I G N A E+F M D T
Sbjct: 321 MYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVT 380
Query: 257 WNSMISGYVDVGDMEAANGLF-------DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+ +++ G ++ F ++ P +VV + C+ID + + G +T A + D
Sbjct: 381 FIGVLTACTHAGLVDKGREFFLSMRETYNIAP--NVVHYGCIIDLFGRAGKITEALDAID 438
Query: 310 RMCMR-NVVSWNILLA 324
+M M N W LLA
Sbjct: 439 QMPMTPNSTIWGTLLA 454
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 232/396 (58%)
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
Y K V AR+ FD P RD+F N M++ YV ++ A +FD MP RD+VSWN MI
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
GYA G V AR FD R+ SW+ +++ Y + + E L L+ M P+
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+SV++AC+++G + +G +H +++ RI+ D+ L T+L+ MYAKCG ++ A+ VFD M
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
EK+V +W+SMI+G HG G ++L +F +M G PN TF+ VL ACTH G+V EG
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M ++ IEP VEHYGCMVDLLGR+G + ++ +L+ + E +W ALL AC
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRI 301
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N E+ + L L+P G YVLLSNIYA W+ V +R+ ++ +++ G S
Sbjct: 302 HKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRS 361
Query: 593 LVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ E E + + R +Y +L E+ ++K
Sbjct: 362 SIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLK 397
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+F+ N ++ Y EV +ARKVF+ P+ DLV+WN+MI GY EVG ARE+FD
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 251 ERDIFTWNSMISGYVDV----------GDMEAANGLFDLMPFRDVVS------------- 287
+RD F+W+SMIS Y +M AA+ + D + VVS
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 288 ----------------WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+ID YAK G++ SA+ FDRM ++V +W+ ++
Sbjct: 142 VHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGL 201
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLST 390
E L LF +MI KPN + + VL AC ++G++ G ++ S + I+P V
Sbjct: 202 GHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYG 261
Query: 391 SLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
++ + + G ++ AR + +MT E + + W +++ +H E A E ++ P
Sbjct: 262 CMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDP 320
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 17/232 (7%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V L+ FDG ++ DAF ++++ ++ AL + E M A + + T +
Sbjct: 70 VGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWRE-MHAASIIPDCITLVSVVS 128
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C+ + +L G +VH + ELDL + +LI MY+ CG++ A++VF+ P D+ T
Sbjct: 129 ACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQT 188
Query: 226 WNSMIDGYVKNREVG------FARELFDFMPERDIFTWNSMIS----GYVDVGD--MEAA 273
W+SMI G + N +G F++ + + M + +I+ G V G +
Sbjct: 189 WSSMIIG-LANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSM 247
Query: 274 NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
N + + P V + CM+D + G+V AR M + + W LL
Sbjct: 248 NEVHGIEP--TVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLG 297
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 275/547 (50%), Gaps = 110/547 (20%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF L K+CA L G+ VHA++ G + + +L +MY+ C DAR+VF+
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD------------------------- 253
PV D V WN+++ GY +N A E+ M E +
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 254 ---------------IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ +++ Y GD+ AA +FD MP ++ VSWN MIDGYA+
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 299 GNVTSARNCFDRMC---------------------------MR------------NVVSW 319
G+ A F+RM MR NV
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 320 NILLALYVRCK-----------------------------DYC--ECLRLFDRMIRGDAK 348
N L+ +Y +CK + C + +RLF RM + K
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ +L+SV+ A A++ +WIH Y + + DV + T+L+ MYAKCG +++AR +
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F++ E++V++WN+MI GYG HG G+ A+E+F EM+ G PN+ TF+ VLSAC+HAG+V
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M+ Y +EP +EHYG MVDLLGRAG + ++ + K+PM+ G +++GA+L
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N EL + AQ + EL P++ +VLL+NIYA+ W +V +R M++ L+K
Sbjct: 541 ACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKT 600
Query: 589 VGSSLVH 595
G S++
Sbjct: 601 PGWSIIQ 607
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
D L F M A P + S+L CA G + G+ +H+ + I + L +T
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPT 449
+L MYAKC AR VFD M ++ V+WN+++ GY +G A+EM + M E+ G
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 450 PNDATFICVL 459
P+ T + VL
Sbjct: 159 PDSITLVSVL 168
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 302/591 (51%), Gaps = 75/591 (12%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + + D+ T++ + + A+ E MM + +E + +T + A R
Sbjct: 102 FFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGE-MMREGIEPSQFTLTNVLASVAATR 160
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-----DGPVW----- 221
L GKKVH+ IVK G ++ V NSL++MY+ CG+ + A+ VF+ D W
Sbjct: 161 CLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIA 220
Query: 222 ---------------------DLVTWNSMIDGYVKN----REVG-FARELFDFMPERDIF 255
D+VTWNSMI GY + R + F++ L D M D F
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRF 280
Query: 256 TW-----------------------------------NSMISGYVDVGDMEAANGLFDLM 280
T N++IS Y G +E A L +
Sbjct: 281 TLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 281 PFRD--VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
+D + + ++DGY K+G++ A+N FD + R+VV+W ++ Y + Y E + L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINL 400
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F M+ + +PN +L ++L+ +++ + G+ IH K V +S +L+TMYAK
Sbjct: 401 FRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 399 CGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
G + A FD + E++ VSW SMI+ HG E+ALE+F M G P+ T++
Sbjct: 461 AGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
V SACTHAG+V +G YFD+M+ + KI P + HY CMVDL GRAGL+++++E + K+P+E
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
WG+LLSAC + N +LGK+ A+ L+ LEP + G Y L+N+Y++ GKW+E +R
Sbjct: 581 PDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+ MK+ ++K G S + VE+ +K +Y + +I ++K
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIK 691
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 201/463 (43%), Gaps = 105/463 (22%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
VH R++K G +++ N+L+++YS G L ARK+F++ P+ +WN+++ Y K +
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA--------------------NGLFD 278
+ + E FD +P+RD +W +MI GY ++G A N L
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 279 LMPFR-------------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
+ R +V N +++ YAK G+ A+ FDRM ++++ SW
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW 215
Query: 320 NILLALYVRC------------------------------KDY-CECLRLFDRMIRGDA- 347
N ++AL+++ + Y L +F +M+R
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSML 275
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR- 406
P+ +L SVL+ACAN+ + IG+ IHS+I ++ +L++MY++CG ++ AR
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 407 --------------------------------NVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
N+FD++ +++VV+W +MI+GY HG
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYG 395
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+A+ +F M PN T +LS + + G + +I V +
Sbjct: 396 EAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS-VSVSNAL 454
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ + +AG + + + E W +++ A + H ++E
Sbjct: 455 ITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 167/370 (45%), Gaps = 44/370 (11%)
Query: 99 LCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
L + + L++ F+ + E D N+++ + AL + + + + + +
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRF 280
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T + CA + L G+++H+ IV GF++ V N+LI MYS CG V AR++ E
Sbjct: 281 TLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 219 PVWDLVT--WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL 276
DL + +++DGY+K ++ A+ +FD + +RD+ W +MI GY G A L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINL 400
Query: 277 FDLM---------------------------------------PFRDVVSWNCMIDGYAK 297
F M V N +I YAK
Sbjct: 401 FRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 298 IGNVTSARNCFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
G++TSA FD + C R+ VSW ++ + E L LF+ M+ +P+ + +
Sbjct: 461 AGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 357 VLTACANMGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TE 414
V +AC + G+++ G+ ++ +I P + ++ ++ + G++ A+ + M E
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 415 KNVVSWNSMI 424
+VV+W S++
Sbjct: 581 PDVVTWGSLL 590
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 349 PNEASLMSVLTACANMGVIDI--------GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
P SL ++L C N+ + Q +H + K + V L +L+ +Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
AR +FD M + SWN+++ Y G + + E F + +R
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQR 109
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 280/525 (53%), Gaps = 41/525 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP--DAFMCNTIMKSFL 132
Q+ QLLV GL + AA + + +S S +F + + + ++ + ++
Sbjct: 8 QLQVQLLVRGLPLPARAA---VSLIASSHSPGHARAVFDNAVPTACENVYLWTATIAAYA 64
Query: 133 --MLNDPF---GALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ P GAL+ + + N +T + + C+ +R++R G +VH +V G
Sbjct: 65 RHASSSPSVAEGALTLFRLMLRHGVPRPNAFTASSVVRCCSALRAVRVGIQVHGFLVNAG 124
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
VR +L+ MY G V DAR+ +FD
Sbjct: 125 LGRAEHVRAALVDMYGNHGRVADARR-------------------------------VFD 153
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
M + N+M++ YV GD+E+ +FD M RD++SWN ++ GY + G AR
Sbjct: 154 EMSATSVVLGNTMVACYVRAGDVESGRVVFDRMVERDLISWNTLMMGYLRQGGAGVAREL 213
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F+ M RNV SWN+ +A Y + + + + + +F+RM +P+ A++ +++ACA +G +
Sbjct: 214 FEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRLARFQPDPATMAVLMSACAQLGSL 273
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+ + +H ++K ++ + + SL+ MYAKCG + A +F K+ VS+N MI
Sbjct: 274 SVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDTVSYNVMICAL 333
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG G AL++F EM K P+ T + VLSAC HAG+V +G +YF+ M+ Y IE
Sbjct: 334 ARHGHGRDALQVFDEMSKERLQPDAVTLLGVLSACAHAGLVHDGKFYFESMKTNYAIEQS 393
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+HY CMVDL GRAGL++++ EL +PME +WGAL++AC H N E+GK+ A+ L+
Sbjct: 394 PDHYACMVDLYGRAGLIKEAYELARAMPMEPHAGVWGALINACRKHCNVEVGKVAARELI 453
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+EPR+PG YVLL+N A +W+ VE + + M+ K +EK G S
Sbjct: 454 AIEPRNPGTYVLLANTLARGQQWEFVETVWQSMRGKGIEKTAGCS 498
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 255/476 (53%), Gaps = 33/476 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + DA N ++ F + G + + A V N YT L +
Sbjct: 62 LFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVP-NDYTISTLLRAVISTE 120
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
++VHA G L++FV +SLI Y+
Sbjct: 121 LDVLVRQVHALAFHLGHYLNVFVGSSLIRAYA---------------------------- 152
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
G + +G A F+ + +D+ +WN+++S Y+++G A FD MP R+++SW +
Sbjct: 153 GLKEEEALGRA---FNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTL 209
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
++GY K V AR+ FD M RNVVSW +++ YV+ K + + L+LF M + + +PN
Sbjct: 210 VNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNH 269
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ SVL ACA + +G +H I K I DV+ TSL+ MYAKCG MD A VF++
Sbjct: 270 FTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFES 329
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ +KN+VSWN++I GY HG +ALE F M+ G TP++ TF+ VLSAC HAG+V EG
Sbjct: 330 IRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVG-TPDEVTFVNVLSACVHAGLVEEG 388
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
+F M Y I+ ++EHY CMVDL GRAG ++E L+ +P E LWGALL+AC
Sbjct: 389 EKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACG 448
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
HSN ELG+ A+ + LE P Y +LS I +G W V LR MKE+ ++K
Sbjct: 449 LHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKK 504
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 205/483 (42%), Gaps = 94/483 (19%)
Query: 227 NSMIDGYVKNREVGFARELFD-FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
N MI+ Y+ N V A +L D + +I +WN +++ Y+ + + LFD MP +D
Sbjct: 12 NYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDA 71
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC---------- 335
VSWN M+ G+ + N CF +M VV + ++ +R E
Sbjct: 72 VSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHAL 131
Query: 336 -------LRLF--DRMIRGDAKPNEASLMSVLTACANMGVIDIGQW---IHSYIQKCRI- 382
L +F +IR A E + A ++ + D+ W + SY++ +
Sbjct: 132 AFHLGHYLNVFVGSSLIRAYAGLKEEEALG--RAFNDISMKDVTSWNALVSSYMELGKFV 189
Query: 383 ----------KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+ +++ T+L+ Y K ++ AR+VFD+M+E+NVVSW +MI GY + +
Sbjct: 190 DAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKR 249
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK--IEPKVEH 490
AL++F+ M K PN TF VL AC + ++ G L I K I V
Sbjct: 250 FVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMG---LQLHPCIIKSGIANDVIW 306
Query: 491 YGCMVDLLGRAGLM----------RDSEELVSKLPMEAGPALWG---------------- 524
+VD+ + G M RD + LVS + G A G
Sbjct: 307 LTSLVDMYAKCGDMDAAFGVFESIRD-KNLVSWNAIIGGYASHGLATRALEEFDRMKVVG 365
Query: 525 --------ALLSACSTHSNSELGKIVAQHLMELEPR-----DPGPYVLLSNIYASEGKWD 571
+LSAC E G+ +H ++ + + Y + ++Y G++D
Sbjct: 366 TPDEVTFVNVLSACVHAGLVEEGE---KHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFD 422
Query: 572 EVENLRRIMKEK-------ELEKAVG-SSLVHPGEFASESI--VENCPPHRKCIVYSMLG 621
E ENL + M + L A G S + GE+A+E I +E+ P ++ + G
Sbjct: 423 EAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQG 482
Query: 622 EIG 624
E G
Sbjct: 483 EKG 485
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 246/449 (54%), Gaps = 30/449 (6%)
Query: 176 GKKVHARIVKCGFEL-DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G +HAR ++ GF DLFVR +L+ MY+
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYA-----------------------------KT 96
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
E+ AR FD P RD+F N M++ YV G++ A +FD M RD+VSWN MI G
Sbjct: 97 AAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHG 156
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
YA G+V AR FD R+ SW+ +++ Y + + E L L+ M P+ S+
Sbjct: 157 YAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISM 216
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+SVL+AC+ MG + IG +H +++ R++ D+ L T+L+ MYAKCG ++ + VF M
Sbjct: 217 VSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPV 276
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
K+V++W+SMI+G HG G AL +F EM +G PN+ TFI VL ACTH G+V +G Y
Sbjct: 277 KDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKY 336
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M ++ + P++EHYGCMVDLLGRAG + ++ EL+ + + P +W LL AC H
Sbjct: 337 FSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHK 396
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N E+ + L L+P G YVLLSNIYA W+ V +R+ ++ + +++ G S +
Sbjct: 397 NVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSI 456
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEI 623
E + + R +Y ML E+
Sbjct: 457 EWENTVHEFVSGDRSHPRIEEIYKMLEEM 485
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 165/389 (42%), Gaps = 54/389 (13%)
Query: 76 IHTQLLVSGLSQ-DSFAASRVLKKLC-TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H + L SG + D F + +++ T+ ++L+ FD D F+CN ++ +++
Sbjct: 69 LHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVA 128
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE-LDL 192
G+ AR V G DL
Sbjct: 129 -----------------------------------------RGEVAEARKVFDGMSGRDL 147
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-- 250
N++IH Y+V G+V AR++F+ D +W+SMI Y K R A EL+ M
Sbjct: 148 VSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVA 207
Query: 251 --ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSA 304
D + S++S +G + + + D+ ++D YAK G++ ++
Sbjct: 208 GVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENS 267
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
F M +++V++W+ ++ + L LF MI +PNE + + VL AC ++
Sbjct: 268 LKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHV 327
Query: 365 GVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNS 422
G+++ G+ S + + P + ++ + + G ++ A + +MT K + + W +
Sbjct: 328 GLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRT 387
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
++ +H E A E +++ P +
Sbjct: 388 LLGACRIHKNVEIAEEAMAKLKVLDPLAD 416
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 282/494 (57%), Gaps = 13/494 (2%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ F L A+ + + ++ +V + +T+ + C +
Sbjct: 206 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGL 264
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L GK++H+R+++ G LD+ V SL+ MY+ C G V D+RKVFE P ++++W ++
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324
Query: 230 IDGYVKNREVGF-ARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
I YV++ E A ELF M I F+++S++ ++ D ++
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 384
Query: 285 VVSWNC----MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
+ S NC +I YA+ G + AR FD + +N+VS+N ++ Y + E LF+
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 444
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+ + + S+L+ A++G + G+ IH + K K + + +L++MY++CG
Sbjct: 445 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 504
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++ A VF+ M ++NV+SW SMI G+ HG +ALEMF +M + G PN+ T++ VLS
Sbjct: 505 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 564
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H GM+ EG +F+ M + + I P++EHY CMVDLLGR+GL+ ++ E ++ +P+ A
Sbjct: 565 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 624
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W LL AC H N+ELG+ A+ ++E EP DP Y+LLSN++AS G+W +V +R+ M
Sbjct: 625 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 684
Query: 581 KEKELEKAVGSSLV 594
KE+ L K G S +
Sbjct: 685 KERNLIKEAGCSWI 698
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 209/431 (48%), Gaps = 30/431 (6%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L+SC + F +H +L+ SGL DS + ++ L + + L F+G+
Sbjct: 51 LKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS-LYSKCGDTETARLIFEGMGNKR 109
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ + M S N + + M+ N Y F + + C+ G+ ++
Sbjct: 110 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169
Query: 181 ARIVKCGF-ELDLFVRNSLIHMY-SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+VK G+ E D+ V LI M+ G++ A KVF+ P +LVTW MI + +
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA---Q 226
Query: 239 VGFARELFD---------FMPERDIFTWNSMISGYVDVGDMEAANGLFD----LMPFRDV 285
+G AR+ D ++P+R FT++S++S ++G + L L DV
Sbjct: 227 LGCARDAIDLFLDMELSGYVPDR--FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 284
Query: 286 VSWNCMIDGYAKI---GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC--ECLRLFD 340
++D YAK G+V +R F++M NV+SW ++ YV+ + C E + LF
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE-CDKEAIELFC 343
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+MI G +PN S SVL AC N+ G+ ++SY K I + SL++MYA+ G
Sbjct: 344 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 403
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
M+ AR FD + EKN+VS+N+++ GY + + E+A +F E+ G + TF +LS
Sbjct: 404 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 463
Query: 461 ACTHAGMVLEG 471
G + +G
Sbjct: 464 GAASIGAMGKG 474
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 187/381 (49%), Gaps = 46/381 (12%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED- 217
T+ +L K C R+ + GK VH ++++ G ELD V N+LI +YS CG+ AR +FE
Sbjct: 46 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 105
Query: 218 GPVWDLVTWNSMIDGYVKNR-------------EVGFARELFDFMP-----ERDIFTW-N 258
G DLV+W++M+ + N E+GF + F + W
Sbjct: 106 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 165
Query: 259 SMISGYV-DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK-IGNVTSARNCFDRMCMRNV 316
+I G+V G +EA DV +ID + K G++ SA FD+M RN+
Sbjct: 166 EIIYGFVVKTGYLEA-----------DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
V+W +++ + + + + LF M P+ + SVL+AC +G++ +G+ +HS
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 274
Query: 377 IQKCRIKPDVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+ + + DV + SL+ MYAKC G +D +R VF+ M E NV+SW ++I Y G+
Sbjct: 275 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGEC 334
Query: 434 EK-ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
+K A+E+F +M PN +F VL AC + G + Y ++ +
Sbjct: 335 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-----YAVKLGIASVN 389
Query: 493 C----MVDLLGRAGLMRDSEE 509
C ++ + R+G M D+ +
Sbjct: 390 CVGNSLISMYARSGRMEDARK 410
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
D M + +A P+ + +L +C +G+ +H + + ++ D ++ +L+++Y+K
Sbjct: 32 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 91
Query: 399 CGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
CG + AR +F+ M K ++VSW++M+ + + +A+ F++M + G PN+ F
Sbjct: 92 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 151
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC-MVDLLGR-AGLMRDSEELVSKLP 515
V+ AC++A G + + + +E V GC ++D+ + +G + + ++ K+P
Sbjct: 152 VIRACSNANYAWVGEIIYGFVVKTGYLEADV-CVGCELIDMFVKGSGDLGSAYKVFDKMP 210
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 282/494 (57%), Gaps = 13/494 (2%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ F L A+ + + ++ +V + +T+ + C +
Sbjct: 188 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGL 246
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L GK++H+R+++ G LD+ V SL+ MY+ C G V D+RKVFE P ++++W ++
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306
Query: 230 IDGYVKNREVGF-ARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
I YV++ E A ELF M I F+++S++ ++ D ++
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 366
Query: 285 VVSWNC----MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
+ S NC +I YA+ G + AR FD + +N+VS+N ++ Y + E LF+
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 426
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+ + + S+L+ A++G + G+ IH + K K + + +L++MY++CG
Sbjct: 427 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 486
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++ A VF+ M ++NV+SW SMI G+ HG +ALEMF +M + G PN+ T++ VLS
Sbjct: 487 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 546
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H GM+ EG +F+ M + + I P++EHY CMVDLLGR+GL+ ++ E ++ +P+ A
Sbjct: 547 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 606
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W LL AC H N+ELG+ A+ ++E EP DP Y+LLSN++AS G+W +V +R+ M
Sbjct: 607 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 666
Query: 581 KEKELEKAVGSSLV 594
KE+ L K G S +
Sbjct: 667 KERNLIKEAGCSWI 680
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 209/431 (48%), Gaps = 30/431 (6%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L+SC + F +H +L+ SGL DS + ++ L + + L F+G+
Sbjct: 33 LKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS-LYSKCGDTETARLIFEGMGNKR 91
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ + M S N + + M+ N Y F + + C+ G+ ++
Sbjct: 92 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151
Query: 181 ARIVKCGF-ELDLFVRNSLIHMY-SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+VK G+ E D+ V LI M+ G++ A KVF+ P +LVTW MI + +
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA---Q 208
Query: 239 VGFARELFD---------FMPERDIFTWNSMISGYVDVGDMEAANGLFD----LMPFRDV 285
+G AR+ D ++P+R FT++S++S ++G + L L DV
Sbjct: 209 LGCARDAIDLFLDMELSGYVPDR--FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266
Query: 286 VSWNCMIDGYAKI---GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC--ECLRLFD 340
++D YAK G+V +R F++M NV+SW ++ YV+ + C E + LF
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE-CDKEAIELFC 325
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+MI G +PN S SVL AC N+ G+ ++SY K I + SL++MYA+ G
Sbjct: 326 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 385
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
M+ AR FD + EKN+VS+N+++ GY + + E+A +F E+ G + TF +LS
Sbjct: 386 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 445
Query: 461 ACTHAGMVLEG 471
G + +G
Sbjct: 446 GAASIGAMGKG 456
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 187/381 (49%), Gaps = 46/381 (12%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED- 217
T+ +L K C R+ + GK VH ++++ G ELD V N+LI +YS CG+ AR +FE
Sbjct: 28 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 87
Query: 218 GPVWDLVTWNSMIDGYVKNR-------------EVGFARELFDFMP-----ERDIFTW-N 258
G DLV+W++M+ + N E+GF + F + W
Sbjct: 88 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 147
Query: 259 SMISGYV-DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK-IGNVTSARNCFDRMCMRNV 316
+I G+V G +EA DV +ID + K G++ SA FD+M RN+
Sbjct: 148 EIIYGFVVKTGYLEA-----------DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
V+W +++ + + + + LF M P+ + SVL+AC +G++ +G+ +HS
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 256
Query: 377 IQKCRIKPDVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
+ + + DV + SL+ MYAKC G +D +R VF+ M E NV+SW ++I Y G+
Sbjct: 257 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGEC 316
Query: 434 EK-ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
+K A+E+F +M PN +F VL AC + G + Y ++ +
Sbjct: 317 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-----YAVKLGIASVN 371
Query: 493 C----MVDLLGRAGLMRDSEE 509
C ++ + R+G M D+ +
Sbjct: 372 CVGNSLISMYARSGRMEDARK 392
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
D M + +A P+ + +L +C +G+ +H + + ++ D ++ +L+++Y+K
Sbjct: 14 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 73
Query: 399 CGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
CG + AR +F+ M K ++VSW++M+ + + +A+ F++M + G PN+ F
Sbjct: 74 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 133
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC-MVDLLGR-AGLMRDSEELVSKLP 515
V+ AC++A G + + + +E V GC ++D+ + +G + + ++ K+P
Sbjct: 134 VIRACSNANYAWVGEIIYGFVVKTGYLEADV-CVGCELIDMFVKGSGDLGSAYKVFDKMP 192
>gi|449442521|ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 1 [Cucumis sativus]
gi|449442523|ref|XP_004139031.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 2 [Cucumis sativus]
Length = 517
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 290/512 (56%), Gaps = 20/512 (3%)
Query: 96 LKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH 155
LK L S+S + + + P + N ++ S + P L F Y +M+ H
Sbjct: 3 LKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGL-FLYNQMLRYPSSH 61
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
NH+TF K C + ++G ++HA ++K G D+F++NSL+H Y + G+V A +F
Sbjct: 62 NHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIF 121
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARE-LFDFMPERDIFTWNSMISGYVDVGDM---- 270
+ P D+V+W S+I G K +GF +E L F+ ++++ +
Sbjct: 122 DSIPDPDVVSWTSIISGLSK---LGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLK 178
Query: 271 --EAANGL-FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
+A +GL + +V+ N ++D Y + + SA N F++M R+VVSW ++ Y
Sbjct: 179 LGKAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYA 238
Query: 328 RCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ E +R+F M+ G+A PNEA+L++VL+AC+++ + +GQW+HSYI + DV
Sbjct: 239 QSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINS---RHDV 295
Query: 387 LL----STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
++ +L+ MY KCG M++A +F + K++VSW+++I G M+G G++A +F
Sbjct: 296 IIDGNVGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSL 355
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
M G +P+D TF+ +LSAC+H G++ +G F+ M+ +Y I P++ HY CMVD+ G+AG
Sbjct: 356 MLVHGVSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAG 415
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSN 562
L+ ++E + ++PMEA +WGALL AC H N + + V + L+ + G + LLSN
Sbjct: 416 LLDEAEAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSN 475
Query: 563 IYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YA +W++ ++R M+ + L+K G S +
Sbjct: 476 TYACCDRWNDANDVRVAMRSRGLKKMAGRSWI 507
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 291/591 (49%), Gaps = 111/591 (18%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F + E D F N ++ + + AL YY +M+ + + YTFP + + C GI
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY-RMLWAGMRPDVYTFPCVLRTCGGIPD 212
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
R G++VHA +++ GF ++ V N+L+ MY+ CG+++ ARKVF+ V D ++WN+MI G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272
Query: 233 YVKNR-----------------------------------EVGFARELFDF--------- 248
+ +N EVGFA+E+ F
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 249 --------------------------MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
M +D +W +MISGY G + A ++ LM
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 283 ---------------------------------------RDVVSWNCMIDGYAKIGNVTS 303
R VV N +++ YAK ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F M ++VVSW+ ++A + E L F M+ G KPN + ++ L+ACA
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVTFIAALSACAA 511
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
G + G+ IH+Y+ +C I + + +LL +Y KCG A F +EK+VVSWN M
Sbjct: 512 TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIM 571
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
+ G+ HG G+ AL +F +M + G P++ TF+ +L AC+ AGMV++GW F +M +
Sbjct: 572 LSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFS 631
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
I P ++HY CMVDLL R G + ++ L++++P++ A+WGALL+ C H + ELG++ A
Sbjct: 632 IVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAA 691
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ ++ELEP D +VLL ++Y GKW +V +R+ M+EK LE+ G S V
Sbjct: 692 KVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWV 742
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 14/303 (4%)
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L ++C R++ G + AR L + N+++ M GE+ A +VF P D
Sbjct: 102 LFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERD 161
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANG 275
+ +WN M+ GY K VGF E D D++T+ ++ + D
Sbjct: 162 VFSWNVMVGGYGK---VGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGRE 218
Query: 276 LFDLM---PFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+ + F D V N ++ YAK G++ +AR FD M + + +SWN ++A + +
Sbjct: 219 VHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHE 278
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
L LF M+ + +PN ++ SV A + + + +H + K DV S
Sbjct: 279 CEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNS 338
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ MY G M A +F M K+ +SW +MI GY +G +KALE++ ME +P+
Sbjct: 339 LIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPD 398
Query: 452 DAT 454
D T
Sbjct: 399 DVT 401
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 12/246 (4%)
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N M+ + G + A F +M R+V SWN+++ Y + E L L+ RM+ +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ + VL C + +G+ +H+++ + +V + +L+TMYAKCG + AR V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M + +SWN+MI G+ + + E LE+F+ M + PN T V A +GM+
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA---SGML 311
Query: 469 LEGWWYFDL----MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL-W 523
E + ++ ++R + I+ V ++ + G M D+ ++ S+ ME A+ W
Sbjct: 312 SEVGFAKEMHGFAVKRGFAID--VAFCNSLIQMYTSLGRMGDAGKIFSR--METKDAMSW 367
Query: 524 GALLSA 529
A++S
Sbjct: 368 TAMISG 373
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+E + +++ C +D G + + L ++L+M + G + A V
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
F M E++V SWN M+ GYG G E+AL+++ M G P+ TF CVL C
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTC 207
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 291/583 (49%), Gaps = 95/583 (16%)
Query: 102 SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
SLS + FD IQ D + N ++ + + + + M++ + ++ TFP
Sbjct: 31 SLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFP 90
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
+ K C R++ +G K+H +K GF D++V SLIH+YS V +AR +F++ PV
Sbjct: 91 SVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 147
Query: 222 DLVTWNSMIDGYVK-----------------------------------NREV------- 239
D+ +WN+MI GY + NR V
Sbjct: 148 DMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 207
Query: 240 --GFAREL-------FDFMPERDIFTWNSMISGY-------------------------- 264
G EL FD M RD+ +WNS+I Y
Sbjct: 208 KHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 267
Query: 265 ---------VDVGDMEAANGL--FDLMP---FRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+GD+ A + F L D+ N ++ YAK+G V SAR F+
Sbjct: 268 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 327
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDI 369
+ +V+SWN +++ Y + E + +++ M G+ N+ + +SVL AC+ G +
Sbjct: 328 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 387
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G +H + K + DV + TSL MY KCG ++ A ++F + N V WN++I +G
Sbjct: 388 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 447
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HG GEKA+ +F EM G P+ TF+ +LSAC+H+G+V EG W F++MQ Y I P ++
Sbjct: 448 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 507
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HYGCMVD+ GRAG + + + + + ++ ++WGALLSAC H N +LGKI ++HL E+
Sbjct: 508 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 567
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
EP G +VLLSN+YAS GKW+ V+ +R I K L K G S
Sbjct: 568 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 610
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 37/206 (17%)
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
+S +V + ++ FD + RDV +WN MI GY + GN + CF
Sbjct: 26 VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS----------- 74
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC 380
LF M+ P+ + SVL AC VID G IH K
Sbjct: 75 -----------------LF--MLSSGLTPDYRTFPSVLKACRT--VID-GNKIHCLALKF 112
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF 440
DV ++ SL+ +Y++ + AR +FD M +++ SWN+MI GY G ++AL +
Sbjct: 113 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 172
Query: 441 MEMEKRGPTPNDATFICVLSACTHAG 466
+ + T + +LSACT AG
Sbjct: 173 NGLRAM----DSVTVVSLLSACTEAG 194
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 282/504 (55%), Gaps = 17/504 (3%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
VS ++ FDG + D N ++ S + N G ++ KM V +++T+ ++
Sbjct: 97 VSEAIKLFDGTSKRDCHSWNIVL-SGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIP 155
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C L G++VHA IVK +LD F+ +L+ MY+ GE+ DARKVF+ P LVT
Sbjct: 156 CC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVT 211
Query: 226 WNSMIDGYVK----NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
WN+MI Y K ++ +G R+L D +T+ +++ + + A + L+
Sbjct: 212 WNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLII 271
Query: 282 FR----DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
R D + N +++ Y+K G V SA F+ + ++VVSW +++ +++ E +
Sbjct: 272 ERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMW 331
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI-KPDVLLSTSLLTMY 396
LF +M GD +PN + +L ACA+ G+ H + K + DV++ ++++ MY
Sbjct: 332 LFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMY 391
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT---PNDA 453
+KCG M A F M E+++ SWN +I GY +G G KAL+++ EM GP+ PN+
Sbjct: 392 SKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEV 451
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
TF+ VL AC+H G++ EG+ YF M + I+P EHY CMVDLLGRAGL++++E L+
Sbjct: 452 TFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILA 511
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
LP++ +WGALL AC H + ++ + A+HL EPR+ YVLL+N Y G+W E
Sbjct: 512 LPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEA 571
Query: 574 ENLRRIMKEKELEKAVGSSLVHPG 597
+R +M+ + +EK G S V G
Sbjct: 572 VEIREVMEARGVEKTAGCSWVEIG 595
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 172/386 (44%), Gaps = 40/386 (10%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HA +VK G ++ N L+ Y + DA K+ P +V++N+++ GY K
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR--------------- 283
V A +LFD +RD +WN ++SG V + + GL M R
Sbjct: 97 VSEAIKLFDGTSKRDCHSWNIVLSGCVK--NHKLGEGLTHFMKMRCSSVRPDNFTYAIII 154
Query: 284 -------------DVVSWNCMIDG---------YAKIGNVTSARNCFDRMCMRNVVSWNI 321
D+V +D YA++G + AR FD M R +V+WN
Sbjct: 155 PCCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNA 214
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
+++ Y + + + LF ++ R +E + VL A + +HS I +
Sbjct: 215 MISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERG 274
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
D + +L+ +Y+KCG + A +F+ + +++VVSW +I+G+ G E+A+ +F
Sbjct: 275 FCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFY 334
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M+ PN TF +L AC A +G + L+ + + V +VD+ +
Sbjct: 335 QMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKC 394
Query: 502 GLMRDSEELVSKLPMEAGPALWGALL 527
G M D+ ++P E A W ++
Sbjct: 395 GEMGDALRAFQEMP-ERDIASWNGII 419
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 291/591 (49%), Gaps = 111/591 (18%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F + E D F N ++ + + AL YY +M+ + + YTFP + + C GI
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY-RMLWAGMRPDVYTFPCVLRTCGGIPD 212
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
R G++VHA +++ GF ++ V N+L+ MY+ CG+++ ARKVF+ V D ++WN+MI G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272
Query: 233 YVKNR-----------------------------------EVGFARELFDF--------- 248
+ +N EVGFA+E+ F
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 249 --------------------------MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
M +D +W +MISGY G + A ++ LM
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 283 ---------------------------------------RDVVSWNCMIDGYAKIGNVTS 303
R VV N +++ YAK ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F M ++VVSW+ ++A + E L F M+ G KPN + ++ L+ACA
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVTFIAALSACAA 511
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
G + G+ IH+Y+ +C I + + +LL +Y KCG A F +EK+VVSWN M
Sbjct: 512 TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIM 571
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
+ G+ HG G+ AL +F +M + G P++ TF+ +L AC+ AGMV++GW F +M +
Sbjct: 572 LSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFS 631
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
I P ++HY CMVDLL R G + ++ L++++P++ A+WGALL+ C H + ELG++ A
Sbjct: 632 IVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAA 691
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ ++ELEP D +VLL ++Y GKW +V +R+ M+EK LE+ G S V
Sbjct: 692 KVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWV 742
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 14/304 (4%)
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L ++C R++ G + AR L + N+++ M GE+ A +VF P D
Sbjct: 102 LFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERD 161
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANG 275
+ +WN M+ GY K VGF E D D++T+ ++ + D
Sbjct: 162 VFSWNVMVGGYGK---VGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGRE 218
Query: 276 LFDLM---PFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
+ + F D V N ++ YAK G++ +AR FD M + + +SWN ++A + +
Sbjct: 219 VHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHE 278
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
L LF M+ + +PN ++ SV A + + + +H + K DV S
Sbjct: 279 CEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNS 338
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L+ MY G M A +F M K+ +SW +MI GY +G +KALE++ ME +P+
Sbjct: 339 LIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPD 398
Query: 452 DATF 455
D T
Sbjct: 399 DVTI 402
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 12/246 (4%)
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N M+ + G + A F +M R+V SWN+++ Y + E L L+ RM+ +
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ + VL C + +G+ +H+++ + +V + +L+TMYAKCG + AR V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M + +SWN+MI G+ + + E LE+F+ M + PN T V A +GM+
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA---SGML 311
Query: 469 LEGWWYFDL----MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL-W 523
E + ++ ++R + I+ V ++ + G M D+ ++ S+ ME A+ W
Sbjct: 312 SEVGFAKEMHGFAVKRGFAID--VAFCNSLIQMYTSLGRMGDAGKIFSR--METKDAMSW 367
Query: 524 GALLSA 529
A++S
Sbjct: 368 TAMISG 373
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+E + +++ C +D G + + L ++L+M + G + A V
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
F M E++V SWN M+ GYG G E+AL+++ M G P+ TF CVL C
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTC 207
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 262/450 (58%), Gaps = 11/450 (2%)
Query: 191 DLFVRNSLIHMYS------VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE 244
++F N+L+ +S + + V + P D T+ S++ +V ++
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 245 LFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
+ F+ E ++F NS++ Y VG A LFD M RDVVSWN +I GY G
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLT 359
V AR FD M +N+VSW+ +++ Y R + Y + + LF +M G PN+ +L+SVL+
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLS 268
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA++G +D+G+WIH +I++ +I+ + L +L MYAKCG + A+ VF M E++V+S
Sbjct: 269 ACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVIS 328
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W+ +IMG M+G +A F EM + G PND +F+ +L+ACTHAG+V +G YFD+M
Sbjct: 329 WSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMP 388
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
++Y I PK+EHYGC+VDLL RAG + +E L++ +PM+ +WGALL C + ++E G
Sbjct: 389 QVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERG 448
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
+ V ++EL+ G V L+N+YAS G+ D+ + R M++ + K G S +
Sbjct: 449 ERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNS 508
Query: 600 ASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
E + + + +YSM+ E+ +MK+
Sbjct: 509 VYEFFMGDSSHPQSLRIYSMIRELKWKMKV 538
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 215/445 (48%), Gaps = 58/445 (13%)
Query: 55 DLSH-PILQKLESCST---VKEFHQIHTQLLVSGL-SQDSFAASRVLKKLCTSLSSVSLS 109
D +H + L C+T +++ +I Q++ S + S D + + +S ++ S
Sbjct: 18 DYNHRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHS 77
Query: 110 VLFFDG-IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-NHYTFPLLGKVC 167
VL F+ + P+ F N ++K+F N +S++ +++ + + YTF + K C
Sbjct: 78 VLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKAC 137
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
AG+ + EG+KVH + K G E +LFVRNSL+ +Y G A+K+F++ V D+V+WN
Sbjct: 138 AGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWN 197
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR---- 283
++I GY + V AR +FD M E+++ +W++MISGY A LF M
Sbjct: 198 TLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLA 257
Query: 284 -------------------DVVSW-----------------NCMIDGYAKIGNVTSARNC 307
D+ W N + D YAK G V A+
Sbjct: 258 PNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGV 317
Query: 308 FDRMCMRNVVSWNIL---LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
F M R+V+SW+I+ LA+Y E F MI +PN+ S M +LTAC +
Sbjct: 318 FHEMHERDVISWSIIIMGLAMYGYAN---EAFNFFAEMIEDGLEPNDISFMGLLTACTHA 374
Query: 365 GVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNS 422
G++D G ++ Q I P + ++ + ++ G +D A ++ ++M + NV+ W +
Sbjct: 375 GLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGA 434
Query: 423 MIMG---YGMHGQGEKALEMFMEME 444
++ G Y +GE+ + +E++
Sbjct: 435 LLGGCRIYKDAERGERVVWRILELD 459
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 262/457 (57%), Gaps = 11/457 (2%)
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+++ + E N YTF + K CA L EGK +H +++K G D + NSL+++Y+ CG
Sbjct: 181 QLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 240
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMIS 262
A KVF + P D+V+W ++I G+V G +F+ M +++T+ S++
Sbjct: 241 SANYACKVFGEIPERDVVSWTALITGFVA-EGYGSGLRIFNQMLAEGFNPNMYTFISILR 299
Query: 263 GY-----VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
VD+G A + + + D V ++D YAK + A F+R+ R++
Sbjct: 300 SCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDMYAKNRFLEDAETIFNRLIKRDLF 358
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
+W +++A Y + + ++ F +M R KPNE +L S L+ C+ + +D G+ +HS
Sbjct: 359 AWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMA 418
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K D+ ++++L+ MYAKCG ++ A VFD + ++ VSWN++I GY HGQG KAL
Sbjct: 419 IKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKAL 478
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDL 497
+ F M G P++ TFI VLSAC+H G++ EG +F+ + +IY I P +EHY CMVD+
Sbjct: 479 KAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDI 538
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPY 557
LGRAG + E + ++ + + +W +L AC H N E G+ A L ELEP Y
Sbjct: 539 LGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNY 598
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+LLSN++A++G WD+V N+R +M + ++K G S V
Sbjct: 599 ILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWV 635
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 219/478 (45%), Gaps = 62/478 (12%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N + F L A + G+ +HA + K GFE D+ + N+ + MY V + + F
Sbjct: 89 NQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFF 148
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFA-RELFDFMPER---DIFTWNSMISGYVDVGDME 271
+ + +L + N+++ G+ R L + E +++T+ S++ GD+
Sbjct: 149 KAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLN 208
Query: 272 AANGLF------DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
+ + P D WN +++ YAK G+ A F + R+VVSW L+
Sbjct: 209 EGKAIHGQVIKSGINP--DSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITG 266
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
+V + Y LR+F++M+ PN + +S+L +C+++ +D+G+ +H+ I K + +
Sbjct: 267 FV-AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGN 325
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+ T+L+ MYAK ++ A +F+ + ++++ +W ++ GY GQGEKA++ F++M++
Sbjct: 326 DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 385
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG------CMVDLLG 499
G PN+ T LS C+ + G ++++ + K G +VD+
Sbjct: 386 EGVKPNEFTLASSLSGCSRIATLDSG-------RQLHSMAIKAGQSGDMFVASALVDMYA 438
Query: 500 RAGLMRDSE----ELVSKLPM-------------EAGPAL-----------------WGA 525
+ G + D+E LVS+ + + G AL +
Sbjct: 439 KCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 498
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPG--PYVLLSNIYASEGKWDEVENLRRIMK 581
+LSACS E GK L ++ P Y + +I GK+ EVE+ MK
Sbjct: 499 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 556
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 26/402 (6%)
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
KK+ R++K G D + +SL+++Y C + AR+V E+ P+ D+ WN +
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 237 REVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM---PFR-DVVSW 288
+ A +LF M I F + S+IS +GD + + F D++
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N + Y K +V + F M + N+ S N LL+ + + + R+ +++ +
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN + +S+L CA+ G ++ G+ IH + K I PD L SL+ +YAKCG + A V
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F + E++VVSW ++I G+ G G L +F +M G PN TFI +L +C+ V
Sbjct: 249 FGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYG------CMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
DL ++++ K G +VD+ + + D+E + ++L ++
Sbjct: 308 -------DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFA 359
Query: 523 WGALLSACSTHSNSELG-KIVAQHLMELEPRDPGPYVLLSNI 563
W +++ + E K Q M+ E P + L S++
Sbjct: 360 WTVIVAGYAQDGQGEKAVKCFIQ--MQREGVKPNEFTLASSL 399
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 185/398 (46%), Gaps = 16/398 (4%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL+ S + E IH Q++ SG++ DS + L + S + + F I E
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS-LVNVYAKCGSANYACKVFGEIPER 255
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D ++ F+ + +G+ + +M+A+ N YTF + + C+ + + GK+V
Sbjct: 256 DVVSWTALITGFVA--EGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA+IVK + + FV +L+ MY+ + DA +F DL W ++ GY ++ +
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 373
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM----PFRDVVSWNCM 291
A + F M + FT S +SG + +++ L + D+ + +
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 433
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+D YAK G V A FD + R+ VSWN ++ Y + + L+ F+ M+ P+E
Sbjct: 434 VDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDE 493
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ + VL+AC++MG+I+ G+ + + K I P + ++ + + G + +
Sbjct: 494 VTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIE 553
Query: 411 NMT-EKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
M NV+ W +++ MHG GE+A E+E
Sbjct: 554 EMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 591
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 313/656 (47%), Gaps = 112/656 (17%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P +L+ + ++ Q+H L+ SGL S VL V +
Sbjct: 19 PKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLL--SIDIRSVLVATYAHCGYVHNARK 76
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD +++ + N ++K ++ D F A+ + E + +K ++YT+P + K C+ +
Sbjct: 77 LFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELL 136
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF----EDGPV-WD---- 222
+ G+ +H + F LFV NSL+ MY CGEV +ARKVF E V W+
Sbjct: 137 LVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMIN 196
Query: 223 -----------LVTWNSMID-----------------GYVKNREVGF------------- 241
LV +N M+D GY+K EVG
Sbjct: 197 GYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGK 256
Query: 242 -------------------ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP- 281
AR +FD M ERD+ +W SMI+GY+ GD ++A LF +M
Sbjct: 257 KIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQI 316
Query: 282 --------------------------------------FRDVVSWNCMIDGYAKIGNVTS 303
+ +V +ID YAK +
Sbjct: 317 EGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGL 376
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
+ + F R + V WN LL+ V K E + LF +M+ + N A+ S+L A
Sbjct: 377 SFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGI 436
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM--TEKNVVSWN 421
+ + I+SY+ + ++ ++TSL+ +Y+KCG ++ A +F+ + +++ W+
Sbjct: 437 LADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWS 496
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+I GYGMHG GE A+ +F +M + G PND TF VL +C+HAGMV +G + F M +
Sbjct: 497 IIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKD 556
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
++ P +HY CMVDLLGRAG M ++ +L+ +P G A+WGALL AC H N ELG++
Sbjct: 557 HQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEV 616
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
A+ L ELEP + G YVLL+ +YA+ G+W++ EN+R+ M + L KA SL+ G
Sbjct: 617 AARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIEAG 672
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 257/474 (54%), Gaps = 39/474 (8%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N+ +P L C + L + +HA+I+ GF+ + + LI++YS+ + AR VF
Sbjct: 51 NYLHYPRLLSSCKHLNPLLQ---IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF 106
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-----RDIFTWNSMISGYVDVGDM 270
+ P + WNSMI Y ++++ A E++ M E RD+F ++ Y +GD+
Sbjct: 107 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDL 166
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ A +FD MP RDVV+WN MI G ++ + AR FD+M ++ VSW ++A Y
Sbjct: 167 KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNG 226
Query: 331 DYCECLRLFDRMIRGDA------------------------------KPNEASLMSVLTA 360
+ E L LFD+M G+ PN + +SVL A
Sbjct: 227 CFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA 286
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
A + G H+ I + + L+ SL+ MYAKCG +D + +F+ M K+ VSW
Sbjct: 287 AAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSW 346
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N+M+ GY +HG G++A+ +F M++ + +F+ VLSAC HAG+V EG F M
Sbjct: 347 NAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSD 406
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y I+P +EHY CMVDLLGRAGL ++ + +P+E +WGALL +C HSN +LG+
Sbjct: 407 KYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGE 466
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ HL++LEPR+P +V+LS+IYA G+W + R M + L+K G S V
Sbjct: 467 VALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWV 520
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 25/243 (10%)
Query: 81 LVSGLSQ--DSFAASRVLKKLC--------TSLSSVSLSVLFFDGIQEPDAFMC-----N 125
+++GLSQ D + A RV ++ T ++ + + F + ++ D N
Sbjct: 187 MIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWN 246
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
I+ +++ A+S +++ + F N TF + A + + REG HA I++
Sbjct: 247 VIIAAYMQNGHAKEAISSFHQMRLENF-HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ 305
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
GF + V NSLI MY+ CG++ + K+F + D V+WN+M+ GY + A L
Sbjct: 306 MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 365
Query: 246 FDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYA 296
F M E D ++ S++S G +E +F M + D+ + CM+D
Sbjct: 366 FSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLG 425
Query: 297 KIG 299
+ G
Sbjct: 426 RAG 428
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 300/579 (51%), Gaps = 13/579 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
++Q + + Q+H L+ G ++F ++ L L + + ++ FD + +
Sbjct: 81 LIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLN-LYSKCGELDYTIKLFDKMSQR 139
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ +I+ F + ALS + + + + + + + C + +++ G +V
Sbjct: 140 NMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIA-TQFALSSVLQACTSLGAIQFGTQV 198
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +VKCGF +LFV ++L MYS CGE+ DA K FE+ P D V W SMIDG+VKN +
Sbjct: 199 HCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDF 258
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG--------LFDLMPFRDVVSWNCM 291
A + M D+F ++ + A+ + L + N +
Sbjct: 259 KKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNAL 318
Query: 292 IDGYAKIGNVTSARNCFD--RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
D Y+K G++ SA N F C+ ++VS ++ YV + L F + R +P
Sbjct: 319 TDMYSKSGDMVSASNVFQIHSDCI-SIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEP 377
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
NE + S++ ACAN ++ G +H + K K D +S++L+ MY KCG+ D + +F
Sbjct: 378 NEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLF 437
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D + + ++WN+++ + HG G A+E F M RG PN TF+ +L C+HAGMV
Sbjct: 438 DEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVE 497
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+G YF M++IY + PK EHY C++DLLGRAG ++++E+ ++ +P E W + L A
Sbjct: 498 DGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGA 557
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H + E K A LM+LEP + G +VLLSNIYA E +W++V++LR+++K+ + K
Sbjct: 558 CKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLP 617
Query: 590 GSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G S V VE+ +K +Y L + Q+K
Sbjct: 618 GYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIK 656
>gi|115471447|ref|NP_001059322.1| Os07g0260000 [Oryza sativa Japonica Group]
gi|113610858|dbj|BAF21236.1| Os07g0260000 [Oryza sativa Japonica Group]
Length = 750
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 271/513 (52%), Gaps = 72/513 (14%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD-- 210
V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y CG
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGG 166
Query: 211 ---ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV 267
AR+VF++ D+V+WNS++ Y+ + + A F+ MPER++ +WN++++G+ +
Sbjct: 167 VGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARM 226
Query: 268 GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
GDM A +FD MP R+ VSWN MI GYA G+V +AR+ FDRM ++VVSW +++ Y
Sbjct: 227 GDMVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYA 286
Query: 328 RCKD-------------------------------YCECLRLFD-RMIRGDAKPNEASLM 355
+ D Y E LR F M+ G +P+EA+L+
Sbjct: 287 KIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLV 346
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
SV++ACA +G ++ WI S+I K I V L +L+ M+AKCG + A ++F M +
Sbjct: 347 SVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETR 406
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+++W +MI G+ +G AL ++ M + G +D FI L+AC H G++ EGW F
Sbjct: 407 CIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIF 466
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ M Y I+P++EHYGCMVDLLGRA
Sbjct: 467 NEMVERYNIQPRMEHYGCMVDLLGRA---------------------------------- 492
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
EL + V++ + ELEP + VL+SN A EG+WD V + R M+ +EK GSS +
Sbjct: 493 -ELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQ 551
Query: 596 PGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G E + ++ R+ +Y + + A M+
Sbjct: 552 VGSEVHEFLAKDTRHKRRKEIYETVDGLMALMR 584
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 251/416 (60%), Gaps = 5/416 (1%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N +I Y+ G + A+ +F++ P D ++W +++ GY++N +V + ++F +P+RD+
Sbjct: 233 NVMITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGYLQNGDVDASWKVFQDIPDRDVV 292
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
WN+M+ G+V ++ A LF MP RD+VSWN ++ G+ + G++ +A F M ++
Sbjct: 293 AWNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQGHVQQGDMATANTWFRGMPEKD 352
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
SWN L++ + KD L L MIRG +P+EA+L V++ CA++ + G+ +H
Sbjct: 353 ETSWNTLISGH---KDEG-ALALLSEMIRGGLRPDEATLSVVISICASLVALGYGKMVHL 408
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
Y K + D L+ +SL++MY+KCG++ A VF + +++ V+WN+MI Y HG +
Sbjct: 409 YAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHGMASE 468
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL++F +M K G P+ ATF+ VLSAC H G + EG YF MQ + + P+ +HY CMV
Sbjct: 469 ALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPRSDHYSCMV 528
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLLGR G + + + K+P + W L SAC+ H + +LG+++A+ +++ P D G
Sbjct: 529 DLLGRLGFIYQAYDFTRKIPSDLQINAWETLFSACNAHGDVQLGEVIAKDVLQARPSDGG 588
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPP 610
Y LL+NIYAS+ W ++R +MKE+ L+K G S V GE S S +N P
Sbjct: 589 MYTLLANIYASKEMWSSAASVRGVMKEQGLKKETGCSWVELKGEVVSFSSNDNAHP 644
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 160/304 (52%), Gaps = 21/304 (6%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ ++ F+ +H + PL G SL A +D+F N++I +
Sbjct: 5 FQNLLQPFLRPHHSSIPL-----RGFYSLAPPPDPAAPPYA----VDIFQWNAVITAHLR 55
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G V AR+VF++ P ++ TWN MI G V NR + AR +FD MP R+ +W ++++GY
Sbjct: 56 AGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMPVRNPVSWAALLTGY 115
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
G + A LFD MP R+VVSWN M+ GY + G V AR FD M RN VSW +++
Sbjct: 116 ARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDMMPSRNDVSWLTMIS 175
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLM--SVLTACANMGVIDIGQWIHSYIQKCRI 382
Y++ + E LF D P+ + + ++L+ + + + + +Q
Sbjct: 176 GYIKKRRLREARELF------DLSPSHPTSVCNALLSGYVALSCLKDAEELFGRMQ---- 225
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
+ D + ++T YA+ G M +A+++FD M +K+ +SW +++ GY +G + + ++F +
Sbjct: 226 RRDPVSWNVMITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGYLQNGDVDASWKVFQD 285
Query: 443 MEKR 446
+ R
Sbjct: 286 IPDR 289
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 110/227 (48%), Gaps = 39/227 (17%)
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
D+ WN++I +++ V AR +FD MPER++FTWN MISG V + A +FD MP
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMP 101
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
R+ VSW ++ GYA+ G V AR FDRM RNVVSWN +++ Y+R LFD
Sbjct: 102 VRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDM 161
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M N+ S +++++ YI+K R++
Sbjct: 162 M----PSRNDVSWLTMISG---------------YIKKRRLRE----------------- 185
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
AR +FD N+++ GY + A E+F M++R P
Sbjct: 186 ---ARELFDLSPSHPTSVCNALLSGYVALSCLKDAEELFGRMQRRDP 229
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 43/281 (15%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N+++ + + DA ++F + P DLV+WN+++ G+V+ ++ A F MP
Sbjct: 290 DVVAWNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQGHVQQGDMATANTWFRGMP 349
Query: 251 ERDIFTWNSMISGYVDVGDME---------------------------AANGLFDLMPF- 282
E+D +WN++ISG+ D G + A G ++
Sbjct: 350 EKDETSWNTLISGHKDEGALALLSEMIRGGLRPDEATLSVVISICASLVALGYGKMVHLY 409
Query: 283 -------RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
D + + +I Y+K G + A F + R+ V+WN ++A Y E
Sbjct: 410 AVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHGMASEA 469
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLT 394
L+LF++M + +P+ A+ +SVL+ACA+ G + G ++ S + + P + ++
Sbjct: 470 LKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPRSDHYSCMVD 529
Query: 395 MYAKCGVM----DLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+ + G + D R + ++ + +W ++ HG
Sbjct: 530 LLGRLGFIYQAYDFTRKIPSDL---QINAWETLFSACNAHG 567
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 135/319 (42%), Gaps = 57/319 (17%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
+F G+ E D NT++ + GAL+ E M+ + + T ++ +CA +
Sbjct: 344 WFRGMPEKDETSWNTLISG----HKDEGALALLSE-MIRGGLRPDEATLSVVISICASLV 398
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L GK VH VK GFE D V +SLI MYS CG + +A +VF+ D VTWN+MI
Sbjct: 399 ALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIA 458
Query: 232 GYVKNREVGFARELFD------FMPERDIFTWNSMISGYVDVGDMEAANGLF-------D 278
Y + A +LF+ F P+ F S++S GD+ F +
Sbjct: 459 TYAYHGMASEALKLFNKMTKDGFRPDHATFL--SVLSACAHKGDLYEGCRYFRSMQEDWN 516
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
L P D ++CM+D ++G + A +
Sbjct: 517 LTPRSD--HYSCMVDLLGRLGFIYQAYD-------------------------------- 542
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F R I D + N + ++ +AC G + +G+ I + + R D + T L +YA
Sbjct: 543 FTRKIPSDLQIN--AWETLFSACNAHGDVQLGEVIAKDVLQAR-PSDGGMYTLLANIYAS 599
Query: 399 CGVMDLARNVFDNMTEKNV 417
+ A +V M E+ +
Sbjct: 600 KEMWSSAASVRGVMKEQGL 618
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
D+ +++T + + G + AR VFD M E+NV +WN MI G + A +F M
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAM- 100
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
P N ++ +L+ G V E FD M + V + M+ R G++
Sbjct: 101 ---PVRNPVSWAALLTGYARCGRVAEARELFDRMP-----DRNVVSWNAMMSGYLRNGMV 152
Query: 505 RDSEELVSKLP 515
+ EL +P
Sbjct: 153 ERARELFDMMP 163
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/440 (37%), Positives = 260/440 (59%), Gaps = 16/440 (3%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC--GEVLDARKVFED 217
F L K C+ ++ L + +HA I++ GF+ +LFV LI +V G++ A VF+
Sbjct: 58 FMFLFKQCSTLKDLNQ---LHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDR 114
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMIS-----GYVDVG 268
D WN+MI G+ +NR++ A E + M E+ I FT++ ++ G + +G
Sbjct: 115 IENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLG 174
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
N + L V N +I Y ++ +V ARN FD + ++V+WN ++ +V
Sbjct: 175 KQLHVN-ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVS 233
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
C Y E L LF +M++ +P+EA+L+ ++AC+ +G +D G+W+HS++ + +
Sbjct: 234 CGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAV 293
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRG 447
SL+ MYAKCG ++ AR +F+ ++ KN+V+WN+MIMG HG E AL +F M +R
Sbjct: 294 FNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERV 353
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
TP+ TF+ VL AC + G V EG YFDLM + + I+P ++HYG MVD+LGRAG + ++
Sbjct: 354 ETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEA 413
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+L+ +PME +W LL+AC H N ELG+ V+ H++E+ YVLL+N+YAS
Sbjct: 414 YQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASS 473
Query: 568 GKWDEVENLRRIMKEKELEK 587
G+W+E+ R+ M K +EK
Sbjct: 474 GQWNEMIKTRKSMHRKGVEK 493
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 198/395 (50%), Gaps = 16/395 (4%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQEPDAF 122
+ CST+K+ +Q+H ++ G Q+ F +++ S ++ +V+ FD I+ D F
Sbjct: 62 FKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGF 121
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ NT+++ F A FY ++M+ K + +++TF L K+ + S+ GK++H
Sbjct: 122 LWNTMIRGFGRNRKLLMAFEFY-KRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVN 180
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
I+K G + ++VRN+LIHMY +V AR +F++ P DLV WN++ID +V A
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
Query: 243 RELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD----VVSWNCMIDG 294
+LF M E D T IS +G ++ + + D + +N +ID
Sbjct: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK-PNEAS 353
YAK G V AR F+ + +N+V+WN ++ D + L LF M+ + P+ +
Sbjct: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++VL AC G ++ G+ + K I+P + S++ + + G ++ A + +M
Sbjct: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
Query: 413 -TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEM 443
E N V W +++ MHG GE+ +E+
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEI 455
>gi|297738048|emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 312/630 (49%), Gaps = 86/630 (13%)
Query: 43 FTDTDNQRLPIVDL---------SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAAS 93
T T QR P +D S+P L C TV +IH L+V GLS+D +
Sbjct: 63 LTVTALQRTPEIDRTIASIQSISSNPCFSLLGICKTVSSLRKIHALLVVHGLSEDLLCET 122
Query: 94 RVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGAL-SFYYEKMMAKF 152
+ L L S V + L FD I+ PD + +++ + LND + + FY ++
Sbjct: 123 K-LVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYF-LNDSYSEIVQFYNTRLRKCL 180
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
E+++ F ++ K C+ +R EG+K+H +IVK G D FV L+ MY+ C EV D+R
Sbjct: 181 NEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSR 239
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVG 268
+VF++ ++V W SMI GYV+N + LF+ M E + +T S+++ +G
Sbjct: 240 RVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLG 299
Query: 269 DMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
+ + FDL F ++D Y K G++ A + FD + ++VSW
Sbjct: 300 ALHQGKWVHGYVIKSGFDLNSFLVTP----LLDLYFKCGDIRDAFSVFDELSTIDLVSWT 355
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC 380
++ Y + E L+LF D PN + SVL+ACA G +++G+ +H K
Sbjct: 356 AMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKL 415
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY------------- 427
D +L+ MYAKC ++ AR VF+ + +K+V++WNS+I GY
Sbjct: 416 G-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELF 474
Query: 428 --------------------------------GMHGQGEKA-----------LEMFMEME 444
+HG KA LE+F +M
Sbjct: 475 DQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGRDCSRSLELFGDML 534
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM 504
K PN+ F +LSAC+H+GM+ EGW YF+ M ++Y P ++HY CMVDLL RAG +
Sbjct: 535 KEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRL 594
Query: 505 RDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY 564
++ + + K+P++ +L GA L C HS +LG++ + ++EL P YVL+SN+Y
Sbjct: 595 EEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLY 654
Query: 565 ASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
ASEG+W + + +MK++ L K G SLV
Sbjct: 655 ASEGRWSQANQVMELMKQRGLAKLPGWSLV 684
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 281/494 (56%), Gaps = 13/494 (2%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ F L A+ + + ++ +V + +T+ + C +
Sbjct: 13 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGL 71
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L GK++H+R+++ G LD+ V SL+ MY+ C G V D+RKVFE P ++++W ++
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 230 IDGYVKNREVGF-ARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
I Y ++ E A ELF M I F+++S++ ++ D ++
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 285 VVSWNC----MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
+ S NC +I YA+ G + AR FD + +N+VS+N ++ Y + E LF+
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+ + + S+L+ A++G + G+ IH + K K + + +L++MY++CG
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++ A VF+ M ++NV+SW SMI G+ HG +ALEMF +M + G PN+ T++ VLS
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H GM+ EG +F+ M + + I P++EHY CMVDLLGR+GL+ ++ E ++ +P+ A
Sbjct: 372 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 431
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W LL AC H N+ELG+ A+ ++E EP DP Y+LLSN++AS G+W +V +R+ M
Sbjct: 432 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 491
Query: 581 KEKELEKAVGSSLV 594
KE+ L K G S +
Sbjct: 492 KERNLIKEAGCSWI 505
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 145/279 (51%), Gaps = 24/279 (8%)
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD---------FMPERDIFTWNSMI 261
A KVF+ P +LVTW MI + ++G AR+ D ++P+R FT++S++
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFA---QLGCARDAIDLFLDMELSGYVPDR--FTYSSVL 63
Query: 262 SGYVDVGDMEAANGLFD----LMPFRDVVSWNCMIDGYAKI---GNVTSARNCFDRMCMR 314
S ++G + L L DV ++D YAK G+V +R F++M
Sbjct: 64 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 123
Query: 315 NVVSWNILLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
NV+SW ++ Y + + C E + LF +MI G +PN S SVL AC N+ G+
Sbjct: 124 NVMSWTAIITAYAQSGE-CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 182
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
++SY K I + SL++MYA+ G M+ AR FD + EKN+VS+N+++ GY + +
Sbjct: 183 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 242
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
E+A +F E+ G + TF +LS G + +G
Sbjct: 243 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 281
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A FD+M RN+V+W +++ + + + + LF M P+ + SVL+AC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSW 420
+G++ +G+ +HS + + + DV + SL+ MYAKC G +D +R VF+ M E NV+SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 421 NSMIMGYGMHGQGEK-ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
++I Y G+ +K A+E+F +M PN +F VL AC + G +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 185
Query: 480 RIYKIEPKVEHYGC----MVDLLGRAGLMRDSEE 509
Y ++ + C ++ + R+G M D+ +
Sbjct: 186 --YAVKLGIASVNCVGNSLISMYARSGRMEDARK 217
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 281/494 (56%), Gaps = 13/494 (2%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ F L A+ + + ++ +V + +T+ + C +
Sbjct: 8 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTELGL 66
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L GK++H+R+++ G LD+ V SL+ MY+ C G V D+RKVFE P ++++W ++
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 230 IDGYVKNREVGF-ARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
I Y ++ E A ELF M I F+++S++ ++ D ++
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 285 VVSWNC----MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
+ S NC +I YA+ G + AR FD + +N+VS+N ++ Y + E LF+
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
+ + + S+L+ A++G + G+ IH + K K + + +L++MY++CG
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++ A VF+ M ++NV+SW SMI G+ HG +ALEMF +M + G PN+ T++ VLS
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H GM+ EG +F+ M + + I P++EHY CMVDLLGR+GL+ ++ E ++ +P+ A
Sbjct: 367 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 426
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W LL AC H N+ELG+ A+ ++E EP DP Y+LLSN++AS G+W +V +R+ M
Sbjct: 427 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 486
Query: 581 KEKELEKAVGSSLV 594
KE+ L K G S +
Sbjct: 487 KERNLIKEAGCSWI 500
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 145/279 (51%), Gaps = 24/279 (8%)
Query: 211 ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD---------FMPERDIFTWNSMI 261
A KVF+ P +LVTW MI + ++G AR+ D ++P+R FT++S++
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFA---QLGCARDAIDLFLDMELSGYVPDR--FTYSSVL 58
Query: 262 SGYVDVGDMEAANGLFD----LMPFRDVVSWNCMIDGYAKI---GNVTSARNCFDRMCMR 314
S ++G + L L DV ++D YAK G+V +R F++M
Sbjct: 59 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 118
Query: 315 NVVSWNILLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
NV+SW ++ Y + + C E + LF +MI G +PN S SVL AC N+ G+
Sbjct: 119 NVMSWTAIITAYAQSGE-CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 177
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
++SY K I + SL++MYA+ G M+ AR FD + EKN+VS+N+++ GY + +
Sbjct: 178 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 237
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
E+A +F E+ G + TF +LS G + +G
Sbjct: 238 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 276
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A FD+M RN+V+W +++ + + + + LF M P+ + SVL+AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSW 420
+G++ +G+ +HS + + + DV + SL+ MYAKC G +D +R VF+ M E NV+SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 421 NSMIMGYGMHGQGEK-ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
++I Y G+ +K A+E+F +M PN +F VL AC + G +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 180
Query: 480 RIYKIEPKVEHYGC----MVDLLGRAGLMRDSEE 509
Y ++ + C ++ + R+G M D+ +
Sbjct: 181 --YAVKLGIASVNCVGNSLISMYARSGRMEDARK 212
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 287/531 (54%), Gaps = 16/531 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ + + P A+ F+ + +++ F E + +T + CA + +
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF-ESDKFTLSSVFSACAELEN 284
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L GK++H+ ++ G D V SL+ MY+ C G V D RKVF+ +++W ++
Sbjct: 285 LSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 230 IDGYVKNREVGF-ARELFDFM-----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
I GY+KN + A LF M E + FT++S ++ D + R
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 284 DVVS----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ S N +I + K + A+ F+ + +N+VS+N L R ++ + +L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+ + + + S+L+ AN+G I G+ IHS + K + + + +L++MY+KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +D A VF+ M +NV+SW SMI G+ HG + LE F +M + G PN+ T++ +L
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC+H G+V EGW +F+ M +KI+PK+EHY CMVDLL RAGL+ D+ E ++ +P +A
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+W L AC HSN+ELGK+ A+ ++EL+P +P Y+ LSNIYA GKW+E +RR
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC 630
MKE+ L K G S + G+ + V + +Y L + ++K C
Sbjct: 703 MKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRC 753
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 163/326 (50%), Gaps = 28/326 (8%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF L K C R R GK VHAR+++ E D + NSLI +YS G+ A VFE
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 219 PVW---DLVTWNSMIDGYVKN-REVGFARELFDFMPERDI---FTWNSMI-----SGYVD 266
+ D+V+W++M+ Y N RE+ + +F+ + + + ++I S +V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 267 VGDMEAA----NGLFDLMPFRDVVSWNCMIDGYAKIGN-VTSARNCFDRMCMRNVVSWNI 321
VG + G F+ DV +ID + K N +A FD+M NVV+W +
Sbjct: 184 VGRVTLGFLMKTGHFE----SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ ++ E +R F M+ + ++ +L SV +ACA + + +G+ +HS+ +
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 382 IKPDVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKAL 437
+ DV SL+ MYAKC G +D R VFD M + +V+SW ++I GY + +A+
Sbjct: 300 LVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 438 EMFMEMEKRGPT-PNDATFICVLSAC 462
+F EM +G PN TF AC
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP-NEASLMSVL 358
+V++ N DR+ +R ++ D + D M R +P + + S+L
Sbjct: 21 SVSNRINVADRLILR-----------HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLL 69
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT---EK 415
+C +G+ +H+ + + I+PD +L SL+++Y+K G A +VF+ M ++
Sbjct: 70 KSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKR 129
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VVSW++M+ YG +G+ A+++F+E + G PND + V+ AC+++ V G
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 476 DLMQRIYKIEPKV 488
+ + E V
Sbjct: 190 GFLMKTGHFESDV 202
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 258/441 (58%), Gaps = 30/441 (6%)
Query: 176 GKKVHARIVKCG-FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+++H ++ G F D + ++L+HMY C LDAR+ F++ P + V +M G +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW------ 288
+N V +F M S +G VD A +P R +
Sbjct: 167 RNNLVYTTLSIFRSMVA-------SGSAGVVDEAAALVALSASARVPDRGITGGIHALVS 219
Query: 289 -----------NCMIDGYAKIG--NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
N +ID YAK G ++ +AR FD M R+VVSWN ++ALY + E
Sbjct: 220 KIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEA 278
Query: 336 LRLFDRM--IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
L L+ +M + GD + N +L +VL ACA+ G I G+ IH+ + + ++ +V + TS++
Sbjct: 279 LGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVV 338
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY+KCG +++A F + KN++SW++MI GYGMHG G++AL +F +M K G PN
Sbjct: 339 DMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYI 398
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
TFI VL+AC+HAG++ EG ++++ M+ + IEP VEHYGCMVDLLGRAG + ++ L+ +
Sbjct: 399 TFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKE 458
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+ ++ ALWGALLSAC + N EL KI A+ L EL+ + G YVLLSNIYA G W EV
Sbjct: 459 MKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEV 518
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
E +R ++K + +EK G S V
Sbjct: 519 ERMRVLVKTRGIEKPPGYSSV 539
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 304/546 (55%), Gaps = 16/546 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKK--LCTSLSSVSLSVLFFDGIQ 117
IL+ L S + + +H + G ++F + ++ +C S++S + FD I
Sbjct: 47 ILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQA---FDAIA 103
Query: 118 EPDAFMCNTIMKSFLMLNDPF-GALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
D + T M + ND F +L + E M F NH+TF + K C G+ + G
Sbjct: 104 CKD-MVSWTGMVACYAENDRFQDSLQLFAEMRMVGF-NPNHFTFAGVLKACIGLEAFSVG 161
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
K VH ++K +E+DL+V L+ +Y+ G+ D +VFE+ P D++ W+ MI Y ++
Sbjct: 162 KSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQS 221
Query: 237 REVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSW 288
+ A ELF M + FT+ S++ + +++ + + +V
Sbjct: 222 NQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVS 281
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++D YAK G + ++ F + RN V+WN ++ YV+ D + L L+ M+ +
Sbjct: 282 NALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQ 341
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
+E + SVL ACA++ +++G IHS K DV++ +L+ MYAKCG + AR V
Sbjct: 342 ASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLV 401
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD ++E++ +SWN+MI GY MHG +AL+ F M++ PN TF+ +LSAC++AG++
Sbjct: 402 FDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLL 461
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
G YF M + Y IEP +EHY CMV LLGR+G + + +L+ ++P+E +W ALL
Sbjct: 462 DIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLG 521
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H++ +LG + AQ +++++P+D +VLLSNIYA +W+ V ++R+ MK K ++K
Sbjct: 522 ACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKE 581
Query: 589 VGSSLV 594
G S +
Sbjct: 582 PGLSWI 587
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 136/306 (44%), Gaps = 40/306 (13%)
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLF--------DLMPF------RDVVSWNC---- 290
MP+R+ ++ ++I GYV ++ LF +L PF + +VS C
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 291 ---------------------MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+ID YA G+V SAR FD + +++VSW ++A Y
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
+ + L+LF M PN + VL AC + +G+ +H + K + D+ +
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
LL +Y K G + VF+ M + +V+ W+ MI Y Q +A+E+F +M +
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
PN TF VL +C + G + ++ ++ V ++D+ + G + +S +
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLDNSMK 299
Query: 510 LVSKLP 515
L +LP
Sbjct: 300 LFMELP 305
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RN VS+ L+ YV+ E + LF R+ R + N ++L ++ ++ +
Sbjct: 4 RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSL 63
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H+ I K + + + T+L+ YA CG ++ AR FD + K++VSW M+ Y + +
Sbjct: 64 HACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRF 123
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSAC----------THAGMVLEGWWYFDL------ 477
+ +L++F EM G PN TF VL AC + G VL+ + DL
Sbjct: 124 QDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGL 183
Query: 478 ------------MQRIYKIEPK--VEHYGCMVDLLGRAGLMRDSEELVSKLP---MEAGP 520
+ R+++ PK V + M+ ++ R++ EL ++ +
Sbjct: 184 LDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQ 243
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV--LLSNIYASEGKWD 571
+ ++L +C++ N +LGK V H++++ D +V L ++YA G+ D
Sbjct: 244 FTFASVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLD 295
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 293/546 (53%), Gaps = 13/546 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
ILQ +++ + +H Q+++ G + +F ++ +L + L + S F+ + E
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLN-MYAKLQEIEDSYKVFNTMTEV 235
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N ++ F ND + + +MM + V + TF + K +R + + K+V
Sbjct: 236 NVVSWNAMITGFTS-NDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT--WNSMIDGYVKNR 237
++ G + + V +LI M S CG + +AR +F + WN+MI GY+++
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 238 EVGFARELFDFMPERDIF----TWNSMISGY-----VDVGDMEAANGLFDLMPFRDVVSW 288
A ELF M + DI+ T+ S+ + + +G A + + V
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N + + YAK G++ R F+RM R+++SW L+ Y +C ++ + + +F M
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN+ + SVL +CAN+ +++ GQ +H I K + D + ++L+ MYAKCG + A+ V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ ++ + VSW ++I G+ HG + AL++F M + G PN TF+CVL AC+H G+V
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF LM++ Y + P++EHY C+VDLL R G + D+ E +S++P+E +W LL
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N ELG++ AQ ++ + + YVLLSN Y G + + +LR +MKE+ ++K
Sbjct: 655 ACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKE 714
Query: 589 VGSSLV 594
G S +
Sbjct: 715 PGCSWI 720
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 249/518 (48%), Gaps = 26/518 (5%)
Query: 29 KTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLS-Q 87
KTP N K TD+ Q P+VDL L+ +K+ +H LL S S
Sbjct: 52 KTP-----NSVKVDKTDSHLQIQPLVDL----LRDCVDARFLKQAKTVHGFLLKSKFSNH 102
Query: 88 DSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEK 147
S + + S + + FD + + + F T++ + L N F ++ +
Sbjct: 103 HSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSW-TVLIAGLAENGLFLDGFEFFCE 161
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M ++ + + + + + ++C G+ S+ G VHA+IV GF FV +L++MY+ E
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PERDIFTWNSMI 261
+ D+ KVF ++V+WN+MI G+ N A +LF M P+ F +
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Query: 262 SGYV-DVGDMEAANGL-FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR--MCMRNVV 317
G + DV + +G +L + + +ID +K G++ AR+ F+ + R
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN +++ Y+R + L LF +M + D + + SV A A + + +G+ +H+
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401
Query: 378 QKCRIKPD-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
K ++ + V +S ++ YAKCG ++ R VF+ M +++++SW S++ Y + +KA
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKA 461
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI-YKIEPKVEHYGCMV 495
+E+F M G PN TF VL +C + ++ G ++ ++ ++ +E +V
Sbjct: 462 IEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIE--SALV 519
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
D+ + G + D++++ +++ A W A+++ + H
Sbjct: 520 DMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQH 556
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 251/439 (57%), Gaps = 8/439 (1%)
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
A ++ L+ G ++ +KCGF + + LI ++S CGEV AR +F + DL++ N
Sbjct: 42 AELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCN 101
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV----GDMEAANGLFDLMPFR 283
+MI G+ N E + LF + +S I G + V G N +
Sbjct: 102 AMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKL 161
Query: 284 DVVSWN----CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+VS + + Y ++ + AR FD + + SWN +++ + + LF
Sbjct: 162 GIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLF 221
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
M + + PN ++ S+L+ACA +G + +G+W+HS I+ R + +V +ST+L+ MYAKC
Sbjct: 222 QTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKC 281
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + +AR +FD M EKN V+WN+MI GYG+HG G++AL++F +M P TF+ VL
Sbjct: 282 GSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVL 341
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
AC+HAG+V EG F M + EP EHY CMVD+LGRAG ++ + E + +P+E G
Sbjct: 342 YACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPG 401
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
P +WGALL AC H ++ L + ++ L EL+P + G YVL+SNIY+ E K+ + ++R++
Sbjct: 402 PPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQV 461
Query: 580 MKEKELEKAVGSSLVHPGE 598
K+K L K G +L+ G+
Sbjct: 462 AKKKRLAKTPGCTLIEIGQ 480
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKC 380
+++ +V+ + + +R+F M+ G+ + + ++++VL A A + + +G I KC
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 381 RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF 440
V L T L+++++KCG +++AR +F + +K+++S N+MI G+ +G+ E ++ +F
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 441 MEMEKRGPTPNDATFI 456
E+ G + +T +
Sbjct: 121 KELLSSGERVSSSTIV 136
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++ M V N T + CA I +L G+ VH+ I FE +++V +LI MY+
Sbjct: 221 FQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAK 280
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSM 260
CG + AR++F+ P + VTWN+MI GY + A +LF M + T+ S+
Sbjct: 281 CGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSV 340
Query: 261 ISGYVDVGDMEAANGLFDLM-------PFRDVVSWNCMIDGYAKIGNVTSA 304
+ G ++ +G+F M P + + CM+D + G + A
Sbjct: 341 LYACSHAGLVKEGDGIFHTMVHDFGFEPLAE--HYACMVDILGRAGQLKKA 389
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 241/420 (57%)
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVG 268
L AR + DL ++++ Y K AR FD P RD+F N M++ YV G
Sbjct: 61 LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRG 120
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
++ A +FD M RD+VSWN MI GYA G V AR F+ M R+ SW+ +++ Y +
Sbjct: 121 EVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTK 180
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
+ + L L+ M P+ +++SVL+AC++MG + +G +H +++ ++ DV L
Sbjct: 181 GRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKL 240
Query: 389 STSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
T+L+ MYAKCG ++ + VF +M K+V++W+SMI+G HG G AL +F M G
Sbjct: 241 GTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGL 300
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
PN+ TFI VL +CTH G+V +G YF M ++ + PKV+HYGCMVDLLGR+G + +++
Sbjct: 301 QPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAK 360
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
+L+ +P E +W ALL AC + N E+ + L L+P G YVLLSNIYA
Sbjct: 361 QLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQAN 420
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
W+ V +RR ++ + +++ G S + E I + R +Y MLGE+ +++
Sbjct: 421 SWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLR 480
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 157/387 (40%), Gaps = 52/387 (13%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H + L SG + L + L+ FD D F+CN ++ +++
Sbjct: 61 LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVT-- 118
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFV 194
G+ AR V G E D+
Sbjct: 119 ---------------------------------------RGEVAEARRVFDGMRERDMVS 139
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
N++IH Y+V GEV AR+VF D +W+SM+ Y K R A EL+ M
Sbjct: 140 WNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACV 199
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARN 306
D T S++S D+G + + + DV +ID YAK G++ ++
Sbjct: 200 NPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVR 259
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
F M +++V++W+ ++ + L LF RM+ +PNE + + VL +C ++G+
Sbjct: 260 VFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGL 319
Query: 367 IDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMI 424
+ G+ S + + P V ++ + + G ++ A+ + +M E + V W +++
Sbjct: 320 VSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALL 379
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPN 451
++ E A E ++ P +
Sbjct: 380 GACRIYKNVEVAEEAMAKLRVLDPHAD 406
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 243/392 (61%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I V +A ++FE+ P +++++ +M+DGY K E+ AR LF+ MP++++
Sbjct: 72 NAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVV 131
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W MISGYV+ G + A LF+ MP +++V+ MI GY K G A+ FD++ R+
Sbjct: 132 SWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 191
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+ SWN ++ Y + E L+L +M++ +P+ ++L+SVLTAC+++ + G+ H
Sbjct: 192 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHV 251
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ K + + + +L+TMY KCG + + F + +VVSWN+MI + HG ++
Sbjct: 252 LVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDR 311
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL F EM P+ TF+ +LSAC HAG V E +F+ M YKI P+ EH+ C+V
Sbjct: 312 ALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLV 371
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L R G + + +++ ++P EA +WGALL+AC H N +LG++ A+ ++ELEP++ G
Sbjct: 372 DILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSG 431
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
YV+LSNIYA+ G W EV +R +M+E+ ++K
Sbjct: 432 AYVVLSNIYAAAGMWGEVTRVRGLMREQGVKK 463
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 130/290 (44%), Gaps = 17/290 (5%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM- 249
++ ++I Y G+ A+ +F+ P DL +WN+MI GY +N A +L M
Sbjct: 160 NIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQML 219
Query: 250 ---PERDIFTWNSMISGYVDVGDMEAANGLFDLM---PFRDVVSW-NCMIDGYAKIGNVT 302
+ D T S+++ + ++ L+ + +S N +I Y K G++
Sbjct: 220 KMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSIL 279
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+ F ++ +VVSWN ++A + R Y L F M +P+ + +S+L+AC
Sbjct: 280 DSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACG 339
Query: 363 NMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSW 420
+ G + W +S I+ +I P L+ + ++ G ++ A + M E + W
Sbjct: 340 HAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIW 399
Query: 421 NSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+++ +H GE A + +E+E + N ++ + + AGM
Sbjct: 400 GALLAACHVHLNVKLGELAAKKIVELEPQ----NSGAYVVLSNIYAAAGM 445
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FD I D N ++ + AL + + M+ ++ +H T + C+ +
Sbjct: 182 ILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ-MLKMGMQPDHSTLISVLTACSSL 240
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SL+EG+K H ++K G+E + + N+LI MY CG +LD+ F D+V+WN+MI
Sbjct: 241 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 300
Query: 231 DGYVK----NREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-EAANGLFDLMPFRDV 285
+ + +R + E+ E D T+ S++S G + E+ N ++ +
Sbjct: 301 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKI 360
Query: 286 V----SWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + C++D ++ G V A M + W LLA
Sbjct: 361 VPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLA 404
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 296/546 (54%), Gaps = 17/546 (3%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L++CS +KE +IH + L + + S L + + FD + + D
Sbjct: 126 LKACSALKEASEGREIHCDIKRLRLESNVYV-STALVDFYAKCGCLDDAKEVFDKMHKRD 184
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
N+++ F + + ++ +M V N T + A + SLR GK++H
Sbjct: 185 VVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIH 243
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DGPVWDLVTWNSMIDGYVKNREV 239
V+ GF D+ V ++ +Y C + AR++F+ G V + VTW++M+ YV +
Sbjct: 244 GFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFM 303
Query: 240 GFARELFD--FMPERDIF-----TWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSW 288
A ELF M + D+ T ++I ++ D+ L D++
Sbjct: 304 REALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVG 363
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++ YAK G + A F+ M +R+ VS+ +++ YV+ + E LR+F M
Sbjct: 364 NTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGIN 423
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P +A+L SVL ACA++ + G H Y C D ++ +L+ MYAKCG +D AR V
Sbjct: 424 PEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKV 483
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M ++ +VSWN+MI+ YG+HG G +AL +F M+ G P+D TFIC++SAC+H+G+V
Sbjct: 484 FDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLV 543
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG ++F+ M + + I P++EHY CMVDLL RAGL ++ + K+P+E +WGALLS
Sbjct: 544 AEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLS 603
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC + N ELG+ V++ + +L P G +VLLSN+Y++ G+WD+ +R KE+ EK+
Sbjct: 604 ACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKS 663
Query: 589 VGSSLV 594
G S +
Sbjct: 664 PGCSWI 669
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 183/351 (52%), Gaps = 23/351 (6%)
Query: 135 NDPFG-ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
N P+ A+ YY KM+ + N +TFP + K C+ ++ EG+++H I + E +++
Sbjct: 97 NGPYEEAIDLYY-KMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVY 155
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR----EVGFARELFDFM 249
V +L+ Y+ CG + DA++VF+ D+V WNSMI G+ + EV AR L
Sbjct: 156 VSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEV--ARLLVQM- 212
Query: 250 PERDIFTWNSMISGYV----DVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNV 301
+ D+ +S I G + V + + R DVV ++D Y K +
Sbjct: 213 -QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCI 271
Query: 302 TSARNCFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDR--MIRGDAKPNEA-SLMSV 357
AR FD M ++N V+W+ ++ YV C E L LF + M++ D A +L +V
Sbjct: 272 DYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATV 331
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+ CAN+ + G +H Y K D+++ +LL+MYAKCG+++ A F+ M ++
Sbjct: 332 IRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDA 391
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH-AGM 467
VS+ ++I GY +G E+ L MF+EM+ G P AT VL AC H AG+
Sbjct: 392 VSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGL 442
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 5/247 (2%)
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMR--NVVSWNILLALYVRCKDYCECLRLFDRMI 343
V + ++D Y + AR+ FD+M R NVV WN+L+ Y Y E + L+ +M+
Sbjct: 52 VPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKML 111
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
PN + VL AC+ + G+ IH I++ R++ +V +ST+L+ YAKCG +D
Sbjct: 112 GYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLD 171
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
A+ VFD M +++VV+WNSMI G+ +H G ++ + ++M+ +PN +T + VL A
Sbjct: 172 DAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAV 230
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+ G R + V G ++D+ G+ + + + + +
Sbjct: 231 AQVNSLRHGKEIHGFCVRRGFVGDVVVGTG-ILDVYGKCQCIDYARRIFDMMGIVKNEVT 289
Query: 523 WGALLSA 529
W A++ A
Sbjct: 290 WSAMVGA 296
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 30/301 (9%)
Query: 167 CAGIRSLREGKKVHARIVKC----------GFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
C +SL GK +H ++KC F++ L+ +Y C E+ AR VF+
Sbjct: 19 CIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPF---EKLVDLYIACSELKIARHVFD 75
Query: 217 DGPVW--DLVTWNSMIDGYVKNREVGFARELFDFM------PERDIFTWNSMISGYVDVG 268
P ++V WN +I Y N A +L+ M P R FT+ ++ +
Sbjct: 76 KMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNR--FTFPFVLKACSALK 133
Query: 269 DMEAANGLF-DLMPFR---DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
+ + D+ R +V ++D YAK G + A+ FD+M R+VV+WN +++
Sbjct: 134 EASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMIS 193
Query: 325 LY-VRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
+ + Y E RL +M + D PN ++++ VL A A + + G+ IH + +
Sbjct: 194 GFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFV 252
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
DV++ T +L +Y KC +D AR +FD M KN V+W++M+ Y + +ALE+F +
Sbjct: 253 GDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQ 312
Query: 443 M 443
+
Sbjct: 313 L 313
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 298/552 (53%), Gaps = 33/552 (5%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C++V + Q+H+ LL +G+S D +L L + + F+ +
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD-LYVKCGDIETAHDIFNLGDRTN 310
Query: 121 AFMCNTIMKSFLMLNDPFGALSF-YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N ++ ++ ++D A SF + +M A + N +T+P + + C + G+++
Sbjct: 311 VVLWNLMLVAYGQISDL--AKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI 368
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H+ +K GFE D++V LI MYS + ARK+ E D+V+W SMI GYV++
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQH--- 425
Query: 240 GFARE-LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR--------------- 283
F E L F +D W ++G AA+ + R
Sbjct: 426 DFCEEALATFKEMQDCGVWPD------NIGLASAASACAGIKAMRQGLQIHARVYVSGYA 479
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
D+ WN +++ YA+ G A + F + ++ ++WN L++ + + + Y + L +F +M
Sbjct: 480 ADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKM 539
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ AK N + +S ++A AN+ I G+ +H K + ++ +L+++Y KCG +
Sbjct: 540 SQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSI 599
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ A+ +F M+ +N VSWN++I HG+G +AL++F +M++ G PND TFI VL+AC
Sbjct: 600 EDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 659
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+H G+V EG YF M +Y + P +HY C+VD+LGRAG + + V ++P+ A +
Sbjct: 660 SHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMI 719
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
W LLSAC H N E+G++ A+HL+ELEP D YVLLSN YA GKW + +R++MK+
Sbjct: 720 WRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKD 779
Query: 583 KELEKAVGSSLV 594
+ + K G S +
Sbjct: 780 RGIRKEPGRSWI 791
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 184/396 (46%), Gaps = 16/396 (4%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y +M V Y + C + +G+ +HA++ K F + FV N+LI +Y
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSM 260
G A +VF D D VT+N++I G+ + A ++FD M D T S+
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251
Query: 261 ISGYVDVGDMEAANGLFDL-----MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
++ VGD++ L M F D ++ ++D Y K G++ +A + F+ N
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSF-DYITEGSLLDLYVKCGDIETAHDIFNLGDRTN 310
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VV WN++L Y + D + +F +M PN+ + +L C G I++G+ IHS
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHS 370
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
K + D+ +S L+ MY+K +D AR + + + +++VVSW SMI GY H E+
Sbjct: 371 LSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEE 430
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY--KIEPKVEHYGC 493
AL F EM+ G P++ SAC + +G + R+Y + +
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG---LQIHARVYVSGYAADISIWNT 487
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+V+L R G ++ L ++ + W L+S
Sbjct: 488 LVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG 522
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 153/309 (49%), Gaps = 22/309 (7%)
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++HA V G D + N LI +Y+ G V AR+VF++ D V+W +M+ GY +
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR- 122
Query: 238 EVGFARELFDFMPERDIFTWNSMI-SGYV--------DVGDMEAANGLFDLMPFR----- 283
G +E F + W ++I + YV G + A + ++
Sbjct: 123 --GLGKEAFRLYSQ---MHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS 177
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC-LRLFDRM 342
+ N +I Y G+ A F M + V++N L++ + +C + EC L++FD M
Sbjct: 178 ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC-GHGECALQIFDEM 236
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+P+ ++ S+L ACA++G + G+ +HSY+ K + D + SLL +Y KCG +
Sbjct: 237 QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDI 296
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ A ++F+ NVV WN M++ YG K+ E+F +M+ G PN T+ C+L C
Sbjct: 297 ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTC 356
Query: 463 THAGMVLEG 471
T G + G
Sbjct: 357 TCTGQIELG 365
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 352 ASLMSVLTACANMGVIDIGQW-----IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
A L L AC G +W IH+ + D L+ L+ +YAK G++ AR
Sbjct: 43 ADLTCALQACRGRG----NRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQAR 98
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
VF ++ ++ VSW +M+ GY G G++A ++ +M P VLSACT
Sbjct: 99 QVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGK 158
Query: 467 MVLEG 471
+ +G
Sbjct: 159 LFAQG 163
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 236/379 (62%)
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E D + +I Y ++G ++A + +F + D+V M+ AK+G+V AR FD+
Sbjct: 143 EYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDK 202
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M ++ ++WN +++ YV+C E L LF+ M R K NE S++SVL+AC+++G +D G
Sbjct: 203 MSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQG 262
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+W H+YI++ +++ + L T+L+ MYAKCG M+ A VF M EKNV +W+S I G M+
Sbjct: 263 RWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMN 322
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GEK LE+F M++ PN+ TF+ VL C+ G+V EG +F+ M ++Y IEP++EH
Sbjct: 323 GAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEH 382
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCMVDL GRAG + ++ ++ +P+ WGALL+AC + N E+G++ ++ ++ELE
Sbjct: 383 YGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELE 442
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
++ G YVLLSNIYA WD V N+R+ M K + K G S++ G E V +
Sbjct: 443 AKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSH 502
Query: 611 HRKCIVYSMLGEIGAQMKM 629
R + MLGEI ++K+
Sbjct: 503 PRYAEIQVMLGEISRRLKL 521
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 204/442 (46%), Gaps = 56/442 (12%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQD-----SFAASRVLKKLCTSLSSVSLSV 110
+ HP + +E C+T++E QIHTQLL++GL D F AS L + +++ S
Sbjct: 8 VKHPTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIAL----NNPNNLHYSN 63
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMM-AKFVEHNHYTFPLLGKVCAG 169
D Q P F N+++++ + P + FY + A ++ ++YTF L + A
Sbjct: 64 QVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQ 123
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ + G VH VK GFE D V++ LI+MY+ G + +VF DLV +M
Sbjct: 124 LLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAM 183
Query: 230 IDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
+ K +VGFAR+LFD M +D WN+MISGYV G A LF+LM R+ V N
Sbjct: 184 VSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQ-REGVKVN 242
Query: 290 ----------------------------------------CMIDGYAKIGNVTSARNCFD 309
+ID YAK GN+ A F
Sbjct: 243 EVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFW 302
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
M +NV +W+ + +CL LF M + +PNE + +SVL C+ +G+++
Sbjct: 303 GMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEE 362
Query: 370 GQWIHSYIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMG- 426
G+ + K I+P + ++ +Y + G +D A N ++M +V +W +++
Sbjct: 363 GRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNAC 422
Query: 427 --YGMHGQGEKALEMFMEMEKR 446
Y GE A +E+E +
Sbjct: 423 KIYRNMEMGELASRKIVELEAK 444
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 274/475 (57%), Gaps = 16/475 (3%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C ++REG++VHA ++K +E +++R LI +Y+ C + DAR+V ++ P ++V+W
Sbjct: 20 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 79
Query: 227 NSMIDGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANGLFDL 279
+MI GY + G+A E E + FT+ ++++ + + L
Sbjct: 80 TAMISGYSQR---GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSL 136
Query: 280 M---PFRD-VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+ F + + ++D YAK G + AR FD + R+VVS +++ Y + E
Sbjct: 137 VIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEA 196
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L LF R+ R + N + SVLTA + + +D G+ +HS++ + ++ V+L SL+ M
Sbjct: 197 LDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM 256
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDAT 454
Y+KCG + +R +FD+M E+ V+SWN+M++GY HG G +A+E+F M E+ P+ T
Sbjct: 257 YSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 316
Query: 455 FICVLSACTHAGMVLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
F+ VLS C+H GM G +++++ + EP++EHYGC+VDL GRAG + ++ E + K
Sbjct: 317 FLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKK 376
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P E A+WG+LL AC H N +G+ VA+ L+E+E + G YV+LSN+YAS G+WD+V
Sbjct: 377 MPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDV 436
Query: 574 ENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+R +MKEK + K G S + + + RK V++ + E+ ++K
Sbjct: 437 RTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIK 491
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 193/428 (45%), Gaps = 33/428 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASR--VLKKLCTSLSSVSLSVLFFDGIQ 117
+L + S + ++E ++H ++ + + +R VL C L D +
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARR---VLDEMP 72
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
E + ++ + AL + E +M+ N +TF + C + G+
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP-NEFTFATVLTSCTSSSGFQLGR 131
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H+ ++K FE +FV +SL+ MY+ G++ +AR+VF+ P D+V+ ++I GY
Sbjct: 132 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYA--- 188
Query: 238 EVGFARELFDFMP-------ERDIFTWNSMISGY-----VDVGDMEAANGLFDLMPFRDV 285
++G E D + T+ S+++ +D G ++ L +PF V
Sbjct: 189 QLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY-V 247
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
V N +ID Y+K G++T +R FD M R V+SWN +L Y + E + LF M
Sbjct: 248 VLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEE 307
Query: 346 D-AKPNEASLMSVLTACANMGVIDIGQWIHSYI--QKCRIKPDVLLSTSLLTMYAKCGVM 402
+ KP+ + ++VL+ C++ G+ D G I + QK +P++ ++ ++ + G +
Sbjct: 308 NKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 367
Query: 403 DLARNVFDNMT-EKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICV 458
+ A M E W S++ +H GE +E+E + N ++ +
Sbjct: 368 EEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE----SENAGNYVIL 423
Query: 459 LSACTHAG 466
+ AG
Sbjct: 424 SNLYASAG 431
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
SVLT C + I GQ +H+++ K +P V L T L+ +Y KC + AR V D M E+
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
NVVSW +MI GY G +AL +F+EM G PN+ TF VL++CT + G
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
L+ + E + ++D+ +AG + ++ + LP
Sbjct: 135 SLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 270/483 (55%), Gaps = 11/483 (2%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ F + CA + S+ GK++H +K G +LFV ++L MYS CG + DA KVF
Sbjct: 40 TQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVF 99
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI-FTWNSMISGYVDVGDMEAA- 273
E+ P D V+W +MIDGY K E A F M + ++ + + S G ++A
Sbjct: 100 EEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACK 159
Query: 274 ------NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF--DRMCMRNVVSWNILLAL 325
+ + L D+ N + D Y+K G++ SA N F D C RNVVS+ L+
Sbjct: 160 FGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC-RNVVSYTCLIDG 218
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
YV + + L +F + R +PNE + S++ ACAN ++ G +H+ + K D
Sbjct: 219 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 278
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+S+ L+ MY KCG+++ A FD + + ++WNS++ +G HG G+ A+++F M
Sbjct: 279 PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD 338
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
RG PN TFI +L+ C+HAG+V EG YF M + Y + P EHY C++DLLGRAG ++
Sbjct: 339 RGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 398
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+++E ++++P E W + L AC H + E+GK+ A+ L++LEP++ G VLLSNIYA
Sbjct: 399 EAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYA 458
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGA 625
+E +W++V ++R M++ ++K G S V G E+ RK +Y L +
Sbjct: 459 NERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLD 518
Query: 626 QMK 628
Q+K
Sbjct: 519 QIK 521
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 191/404 (47%), Gaps = 24/404 (5%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
++ S +++ Q+H L G+ + F S L+ + + ++ + F+ + D
Sbjct: 48 IRACASLGSIEMGKQMHCLALKFGIGSELFVGSN-LEDMYSKCGAMFDACKVFEEMPCKD 106
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
++ + + + AL ++KM+ + V + + C +++ + G+ VH
Sbjct: 107 EVSWTAMIDGYSKIGEFEEAL-LAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVH 165
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DGPVWDLVTWNSMIDGYVKNREV 239
+ +VK GFE D+FV N+L MYS G++ A VF D ++V++ +IDGYV+ ++
Sbjct: 166 SSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQI 225
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVS 287
+F + + I FT++S+I + +E L FD PF +
Sbjct: 226 EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI- 284
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
++D Y K G + A FD + ++WN L++++ + + +++F+RM+
Sbjct: 285 ---LVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGV 341
Query: 348 KPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KPN + +S+LT C++ G+++ G + +S + + P + ++ + + G + A+
Sbjct: 342 KPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAK 401
Query: 407 NVFDNMT-EKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKR 446
+ M E N W S + +HG G+ A E +++E +
Sbjct: 402 EFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK 445
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%)
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RN+VSW +++ + + E +R F M P + + S + ACA++G I++G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H K I ++ + ++L MY+KCG M A VF+ M K+ VSW +MI GY
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
G+ E+AL F +M T + L AC
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 152
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 18/282 (6%)
Query: 58 HPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
H + L +C +K +H+ ++ G D F + + + S S +F
Sbjct: 143 HVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI 202
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ + ++ ++ LS + E + + +E N +TF L K CA +L
Sbjct: 203 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVE-LRRQGIEPNEFTFSSLIKACANQAALE 261
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
+G ++HA+++K F+ D FV + L+ MY CG + A + F++ + WNS++ +
Sbjct: 262 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFG 321
Query: 235 KNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAA-------NGLFDLMPFR 283
++ A ++F+ M +R + T+ S+++G G +E + + ++P
Sbjct: 322 QHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGE 381
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ ++C+ID + G + A+ +RM N W L
Sbjct: 382 E--HYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLG 421
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M ++N+VSW +MI G + + +A+ F M G P F + AC G + G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
L + + I ++ + D+ + G M D+ ++ ++P + W A++ S
Sbjct: 61 KQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYS 118
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 287/531 (54%), Gaps = 16/531 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ + + P A+ F+ + +++ F E + +T + CA + +
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF-ESDKFTLSSVFSACAELEN 284
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L GK++H+ ++ G D V SL+ MY+ C G V D RKVF+ +++W ++
Sbjct: 285 LSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 230 IDGYVKNREVGF-ARELFDFM-----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
I GY+KN + A LF M E + FT++S ++ D + R
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 284 DVVS----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ S N +I + K + A+ F+ + +N+VS+N L R ++ + +L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+ + + + S+L+ AN+G I G+ IHS + K + + + +L++MY+KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +D A VF+ M +NV+SW SMI G+ HG + LE F +M + G PN+ T++ +L
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC+H G+V EGW +F+ M +KI+PK+EHY CMVDLL RAGL+ D+ E ++ +P +A
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+W L AC HSN+ELGK+ A+ ++EL+P +P Y+ LSNIYA GKW+E +RR
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC 630
MKE+ L K G S + G+ + V + +Y L + ++K C
Sbjct: 703 MKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRC 753
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 162/323 (50%), Gaps = 22/323 (6%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF L K C R R GK VHAR+++ E D + NSLI +YS G+ A VFE
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 219 PVW---DLVTWNSMIDGYVKN-REVGFARELFDFMPERDI---FTWNSMI-----SGYVD 266
+ D+V+W++M+ Y N RE+ + +F+ + + + ++I S +V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 267 VGDMEAANGLFDLMPFRDVVSWNC-MIDGYAKIGN-VTSARNCFDRMCMRNVVSWNILLA 324
VG + L F V C +ID + K N +A FD+M NVV+W +++
Sbjct: 184 VGRV-TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
++ E +R F M+ + ++ +L SV +ACA + + +G+ +HS+ + +
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 385 DVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKALEMF 440
DV SL+ MYAKC G +D R VFD M + +V+SW ++I GY + +A+ +F
Sbjct: 303 DV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 441 MEMEKRGPT-PNDATFICVLSAC 462
EM +G PN TF AC
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKAC 383
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 116/236 (49%), Gaps = 17/236 (7%)
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP-NEASLMSVL 358
+V++ N DR+ +R++ + ++ A+ D M R +P + + S+L
Sbjct: 21 SVSNRINVADRLILRHLNAGDLRGAVSA-----------LDLMARDGIRPMDSVTFSSLL 69
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT---EK 415
+C +G+ +H+ + + I+PD +L SL+++Y+K G A +VF+ M ++
Sbjct: 70 KSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKR 129
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VVSW++M+ YG +G+ A+++F+E + G PND + V+ AC+++ V G
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 476 DLMQRIYKIEPKVEHYGC-MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
+ + E V GC ++D+ + ++ V E W +++ C
Sbjct: 190 GFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 270/499 (54%), Gaps = 46/499 (9%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+++T P++ K +R + EG+KVH VK G E D +V NSL+ MY+ G++ KVF
Sbjct: 29 DNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKVF 88
Query: 216 EDGPVWDLVTWNSMIDGYV--------------------------------------KNR 237
++ P D+V+WN +I YV KN
Sbjct: 89 DEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNL 148
Query: 238 EVGFARELFDFMP---ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
E+G ++ ++ E + T N+++ + G ++ A +FD M ++V W M+ G
Sbjct: 149 EIG--ERIYRYVVTEFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSG 206
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y G AR F+R +++VV W ++ YV+ + E L LF M +P+ L
Sbjct: 207 YVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVL 266
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+S+LT CA G ++ G+WIH YI++ R+ D ++ T+L+ MYAKCG ++ A VF M E
Sbjct: 267 VSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKE 326
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
++ SW S+I G +G +AL+++ EME G +D TF+ VL+AC+H G V EG
Sbjct: 327 RDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRI 386
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL---WGALLSACS 531
F M +KI+PK EHY C++DLL RAGL+ ++EEL+ K+ E L + +LLSA
Sbjct: 387 FYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAAR 446
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
+ N ++ + VA+ L ++E D + LL+++YAS +W++V N+RR MK+ + K G
Sbjct: 447 NYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGC 506
Query: 592 SLVHPGEFASESIVENCPP 610
S + + E IV N P
Sbjct: 507 SSIEVDGVSHEFIVGNDPS 525
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 176/406 (43%), Gaps = 48/406 (11%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV 106
DN LP+V L+ + V E ++H + +GL DS+ + ++ + +L +
Sbjct: 29 DNFTLPVV------LKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMG-MYAALGKM 81
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
++ FD + E D N ++ S++ A+S + ++ + T
Sbjct: 82 EITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSA 141
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ +++L G++++ R V FE+ + N+L+ M+ CG + AR +F+ ++ W
Sbjct: 142 CSVLKNLEIGERIY-RYVVTEFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCW 200
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR--- 283
SM+ GYV N ARELF+ P +D+ W +M++GYV + A LF M
Sbjct: 201 TSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIR 260
Query: 284 ------------------------------------DVVSWNCMIDGYAKIGNVTSARNC 307
D V ++D YAK G + +A
Sbjct: 261 PDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGV 320
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
F M R+ SW L+ L L+ M + ++ + ++VLTAC++ G +
Sbjct: 321 FYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFV 380
Query: 368 DIGQWI-HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
G+ I +S ++ +I+P + L+ + + G++D A + D M
Sbjct: 381 AEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKM 426
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 28/295 (9%)
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
+L K + + L LF + P+ +L VL + + + G+ +H Y K
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
++ D + SL+ MYA G M++ VFD M E++VVSWN +I Y HG+ E A+ +F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 442 EMEKRGPTPND-ATFICVLSACTHAGMVLEGWWYFDLMQRIYK-----IEPKVEHYGCMV 495
M + D T + LSAC+ VL+ ++ +RIY+ E V +V
Sbjct: 121 RMSRESNLKADEGTIVSTLSACS----VLKN---LEIGERIYRYVVTEFEMSVRTGNALV 173
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP-RDP 554
D+ + G + + + + + W +++S ++ ++ A+ L E P +D
Sbjct: 174 DMFCKCGCLDKARAIFDSMR-DKNVKCWTSMVSGYVSNGRTD----EARELFERSPVKDV 228
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCP 609
+ + N Y ++DE L R M+ ++ + P F S++ C
Sbjct: 229 VLWTAMMNGYVQFNRFDEALELFRCMQ---------TARIRPDNFVLVSLLTGCA 274
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 296/539 (54%), Gaps = 21/539 (3%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ E H ++ GL D + + L L V + FDG+ D NT++
Sbjct: 123 LDEGRAAHGMVIKLGLEHDVYTCNS-LVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVD 181
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL---LGKVCAGIRSLREGKKVHARIVKC 186
++ ++ G+L+ + M +E H + + L C + S+ +GK++H +++
Sbjct: 182 GYV--SNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSM-QGKEIHGYVIRH 238
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
G E D+ V SL+ MY CGEV AR VF P+ +VTWN MI GY N E F
Sbjct: 239 GLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER---PDEAF 295
Query: 247 D-FMPER------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRD----VVSWNCMIDGY 295
D FM R ++ T ++++ + + R VV +++ Y
Sbjct: 296 DCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMY 355
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
K+G V S+ F ++ + +VSWN ++A Y+ + Y E + LF ++ P+ ++
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+V+ A +G + + IHSYI + L+ ++L MYA+ G + +R +FD M K
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK 475
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V+SWN+MIMGY +HGQG+ ALEMF EM+ G PN++TF+ VL+AC+ +G+V EGW +F
Sbjct: 476 DVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHF 535
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+LM + Y + P++EHYGCM DLLGR G +R+ + + +P++ +WG+LL+A ++
Sbjct: 536 NLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQND 595
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ + A+ + +LE + G Y++LS++YA G+W++VE +R +MKEK L + SLV
Sbjct: 596 IDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLV 654
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 180/408 (44%), Gaps = 75/408 (18%)
Query: 97 KKLCTSLSS---VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
K L SL++ + +V ++ PDAF+ N +++ F P Y M+
Sbjct: 45 KSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPA-GALAAYRGMLEDGA 103
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ +TFP++ K CA + L EG+ H ++K G E D++ NSL+ Y+ G V DA +
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----------------------- 250
VF+ PV D+VTWN+M+DGYV N A F M
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223
Query: 251 -----------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
E+DI S++ Y G++ A +F MP R VV+WNCMI
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
GYA A +CF M MR E L++ +
Sbjct: 284 GYALNERPDEAFDCF--MQMR------------------AEGLQV-----------EVVT 312
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+++L ACA G+ +H Y+ + + P V+L T+LL MY K G ++ + +F +
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
K +VSWN+MI Y +A+ +F+E+ + P+ T V+ A
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPA 420
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M+ A+P+ + V+ CA +G +D G+ H + K ++ DV SL+ YAK G+
Sbjct: 98 MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT-FICVLS 460
++ A VFD M +++V+WN+M+ GY +G G AL F EM +D+ I L+
Sbjct: 158 VEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA 217
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
AC ++G + R + +E ++ ++D+ + G + + + + +P+
Sbjct: 218 ACCLEVSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 199/673 (29%), Positives = 321/673 (47%), Gaps = 123/673 (18%)
Query: 48 NQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSV 106
N L V +L + ++ + +H ++ G +S + V LC +
Sbjct: 9 NNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALC---GHI 65
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE--HNHYTFPLLG 164
+ + F+ + + N +++ ++ A+S + +M+++ V+ + YT+P +
Sbjct: 66 TYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFI-RMVSEGVKCVPDGYTYPFVA 124
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K ++S++ G VH RI++ F D +V+N+L+ MY G+V AR VF+ D++
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERD------------------------------- 253
+WN+MI GY +N + A +FD+M
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 254 --------IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA- 304
I N++++ Y+ G M+ A +FD M RDV++W CMI+GY + G+V +A
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 305 ---------------------------------RNCFDRMCMRNVVSWNI-----LLALY 326
C +R V +I L+++Y
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 327 VRCK--DYC-----------------------------ECLRLFDRMIRGDAKPNEASLM 355
+CK D C + L LF RM R D +PN A+L
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE- 414
S+L A A + + IH Y+ K + +T L+ +Y+KCG ++ A +F+ + E
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 415 ---KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
K+VV W ++I GYGMHG G AL++FMEM + G TPN+ TF L+AC+H+G+V EG
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F M YK + HY C+VDLLGRAG + ++ L++ +P E +WGALL+AC
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACV 604
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
TH N +LG++ A L ELEP + G YVLL+NIYA+ G+W ++E +R +M+ L K G
Sbjct: 605 THENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGH 664
Query: 592 SLVHPGEFASESI 604
S + E S S+
Sbjct: 665 STI---EIRSNSV 674
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 289/552 (52%), Gaps = 68/552 (12%)
Query: 49 QRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS--LSSV 106
Q+ I S+ + L+ C + + QIH LL S L + FA ++L TS S
Sbjct: 3 QKAVINYRSNTLNSLLKKCRALSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPSFF 62
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
S + L F + + FM N++++ +++ + P A+ Y + M+ + N+YTFP L K
Sbjct: 63 SHACLIFQNLSLRNIFMYNSMIRGYVLSHSPTRAILCYLD-MLNYGLLANNYTFPPLIKA 121
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C + S ++++ C L+H + V
Sbjct: 122 CTTLGS-------SSKLIGC-----------LVHAHVVT--------------------- 142
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV 286
F F + D F +++I Y DM A LFD +P RDVV
Sbjct: 143 -------------------FGF--DEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVV 181
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
W MIDGY K+G+V AR F+ M RN +SW+ ++A Y R D+ E L LF RM
Sbjct: 182 LWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAG 241
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
PNE+ L+SVLTACA++G + G W+HSY ++C + +L+T+L+ MY+KCG ++ A
Sbjct: 242 TMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESAL 301
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+ F + K+ +WN+MI G M+G K+LE+F +M G P + TF+ VL+ACTHA
Sbjct: 302 STFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHAR 361
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA---LW 523
+V EG F+ M Y +EP++EHY C+VDL+ RAG++ ++E+ + + G +W
Sbjct: 362 LVKEGLKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVW 421
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD-EVENLRRIMKE 582
GA+L AC T+ N E+G V + L ++ D G +VL N+Y E WD E + +RR++ E
Sbjct: 422 GAMLGACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLY-REAGWDMEAKRVRRLISE 480
Query: 583 KELEKAVGSSLV 594
++K G S++
Sbjct: 481 AGMKKKPGCSII 492
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 289/538 (53%), Gaps = 10/538 (1%)
Query: 77 HTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI-QEPDAFMCNTIMKSFLMLN 135
H +LL L D+ S +L+ ++ +L F + F+ NT+++ ++
Sbjct: 24 HCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRG-MVSK 82
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
D F Y M + + +TF + K CA + G +H+ + K GF+ D+FV+
Sbjct: 83 DRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVK 142
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER--- 252
+++ YS CG + DA KVF+D V ++V+W MI G ++ + A +LF + E
Sbjct: 143 TNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLR 202
Query: 253 -DIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMIDGYAKIGNVTSARNC 307
D F ++ +GD+E+ + M R+V ++D Y K G++ AR
Sbjct: 203 PDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFV 262
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD M +++V W+ ++ Y E + LF M + + +P+ +++ L++CA++G +
Sbjct: 263 FDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGAL 322
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
++G W + + +L TSL+ YAKCG M+ A V+ M EK+ V +N++I G
Sbjct: 323 ELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGL 382
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
M+GQ A +F +M K G PN+ TF+ +L CTHAG+V +G YF+ M + + P
Sbjct: 383 AMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPT 442
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+EHYGCMVDLL RAG + ++ L+ +PM+A +WG+LL C H ++L + V + L+
Sbjct: 443 IEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLI 502
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
ELEP + G YVLLSNIY++ +WDE E +R + EK ++K G S V E +V
Sbjct: 503 ELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLV 560
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 286/554 (51%), Gaps = 70/554 (12%)
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH---- 155
+FFD I+ P F N+++ + + P+ AL + + +++ F +H
Sbjct: 202 TVFFD-IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGV 260
Query: 156 ----------------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
N T+ + CA L+ G +HARI++ LDL N LI
Sbjct: 261 QCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLI 320
Query: 200 HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF---- 255
MY+ CG + A++VF+ D ++WNS+I G V A LF+ M +
Sbjct: 321 DMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEF 380
Query: 256 -----------------------------------TWNSMISGYVDVGDMEAANGLFDLM 280
N++I+ Y GD + A+ +F LM
Sbjct: 381 ILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLM 440
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P R+ +SW MI +++ G++ AR FD M RN+V+WN +L+ YV+ E L+L+
Sbjct: 441 PLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYV 500
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M +P+ + + + ACA++ ++ +G + ++ K + +V ++ S++TMY++CG
Sbjct: 501 SMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCG 560
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++ A+N FD++ +K+++SWN+M+ + +G G K ++ F +M K PN +++ VLS
Sbjct: 561 LIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLS 620
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
C+H G+V EG YFD M R++ I P EH+ CMVDLLGRAGL+ +++L+ +P +
Sbjct: 621 GCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNA 680
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W ALL +C H + L + A+ LMEL+ YVLLSN+Y+ G+ D V ++R++M
Sbjct: 681 TVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLM 740
Query: 581 KEKELEKAVGSSLV 594
K K + + G S +
Sbjct: 741 KVKGIRTSRGCSWI 754
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 190/442 (42%), Gaps = 72/442 (16%)
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
++F + K C + R ++HA + K GF ++ ++NS++ MY CG+V A VF D
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVG--------D 269
L WNSMI GY + A ++F+ MPERD +WN++IS + G
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266
Query: 270 MEAANGLF--DLMPFRDVVS---------W--------------------NCMIDGYAKI 298
+E N F + M + V+S W N +ID YAK
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A+ F + + +SWN L+ V + L LF++M R +E L ++L
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD--------------- 403
C+ G+ +H Y K + + +++TMYAKCG D
Sbjct: 387 GVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI 446
Query: 404 ----------------LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
AR FD M E+N+V+WNSM+ Y +G E+ L++++ M G
Sbjct: 447 SWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNG 506
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P+ TF + AC +V G + + + V +V + R GL++++
Sbjct: 507 VQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEA 565
Query: 508 EELVSKLPMEAGPALWGALLSA 529
+ + + W A+L+A
Sbjct: 566 KNTFDSID-DKDLISWNAMLAA 586
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 168/378 (44%), Gaps = 81/378 (21%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCG----------------------------- 206
+K+HA+++ G + LF+ N+L+HMYS CG
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 207 --EVLDARKVFEDGPVW--DLVTWNSMIDGYVKNREVGFARELFDFM--------PERDI 254
+ DA K+F++ PV D V+W +MI GY +N + E F M D
Sbjct: 87 SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146
Query: 255 FTW-----------------------------------NSMISGYVDVGDMEAANGLFDL 279
F++ NS++ YV GD++ A +F
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ + WN MI GY+++ A F+RM R+ VSWN L++++ + +CL +F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
M PN + SVL+ACA+ + G +H+ I + D++ L+ MYAKC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +DLA+ VF ++ E + +SWNS+I G G GE AL +F +M + ++ +L
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386
Query: 460 SACT-----HAGMVLEGW 472
C+ G +L G+
Sbjct: 387 GVCSGPDYASTGELLHGY 404
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 195/432 (45%), Gaps = 46/432 (10%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L S S +K +H ++L S D L + + L+ F ++E
Sbjct: 284 VLSACASTSDLKWGAHLHARILRMEHSLD-LVFGNGLIDMYAKCGCLDLAKRVFKSLREH 342
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D N+++ + AL + +M V + + P + VC+G G+ +
Sbjct: 343 DHISWNSLITGVVHFGLGEDAL-ILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELL 401
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +K G V N++I MY+ CG+ A VF P+ + ++W +MI + ++ ++
Sbjct: 402 HGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDI 461
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF----------DLMPFR------ 283
G AR FD MPER+I TWNSM+S YV G E L+ D + F
Sbjct: 462 GKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRAC 521
Query: 284 -----------------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
+V N ++ Y++ G + A+N FD + ++++SWN
Sbjct: 522 ADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWN 581
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQK 379
+LA + + + + F+ M++ + KPN S +SVL+ C++MG++ G+ + S +
Sbjct: 582 AMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRV 641
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEK 435
I P + ++ + + G+++ A+++ + M K N W++++ +H E
Sbjct: 642 FGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAET 701
Query: 436 ALEMFMEMEKRG 447
A + ME++ G
Sbjct: 702 AAKKLMELDVEG 713
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 293/546 (53%), Gaps = 13/546 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
ILQ +++ + +H Q+++ G + +F ++ +L + L + S F+ + E
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLN-MYAKLQEIEDSYKVFNTMTEV 235
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ N ++ F ND + + +MM + V + TF + K +R + + K+V
Sbjct: 236 NVVSWNAMITGFTS-NDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT--WNSMIDGYVKNR 237
++ G + + V +LI M S CG + +AR +F + WN+MI GY+++
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 238 EVGFARELFDFMPERDIF----TWNSMISGY-----VDVGDMEAANGLFDLMPFRDVVSW 288
A ELF M + DI+ T+ S+ + + +G A + + V
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N + + YAK G++ R F+RM R+++SW L+ Y +C ++ + + +F M
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN+ + SVL +CAN+ +++ GQ +H I K + D + ++L+ MYAKCG + A+ V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ ++ + VSW ++I G+ HG + AL++F M + G PN TF+CVL AC+H G+V
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF LM++ Y + P++EHY C+VDLL R G + D+ E +S++P+E +W LL
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N ELG++ AQ ++ + + YVLLSN Y G + + +LR +MKE+ ++K
Sbjct: 655 ACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKE 714
Query: 589 VGSSLV 594
G S +
Sbjct: 715 PGCSWI 720
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 249/518 (48%), Gaps = 26/518 (5%)
Query: 29 KTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLS-Q 87
KTP N K TD+ Q P+VDL L+ +K+ +H LL S S
Sbjct: 52 KTP-----NSVKVDKTDSHLQIQPLVDL----LRDCVDARFLKQAKTVHGFLLKSKFSNH 102
Query: 88 DSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEK 147
S + + S + + FD + + + F T++ + L N F ++ +
Sbjct: 103 HSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSW-TVLIAGLAENGLFLDGFEFFCE 161
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M ++ + + + + + ++C G+ S+ G VHA+IV GF FV +L++MY+ E
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221
Query: 208 VLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------PERDIFTWNSMI 261
+ D+ KVF ++V+WN+MI G+ N A +LF M P+ F +
Sbjct: 222 IEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Query: 262 SGYV-DVGDMEAANGL-FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR--MCMRNVV 317
G + DV + +G +L + + +ID +K G++ AR+ F+ + R
Sbjct: 282 IGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
WN +++ Y+R + L LF +M + D + + SV A A + + +G+ +H+
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401
Query: 378 QKCRIKPD-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
K ++ + V +S ++ YAKCG ++ R VF+ M +++++SW S++ Y + +KA
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKA 461
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI-YKIEPKVEHYGCMV 495
+E+F M G PN TF VL +C + ++ G ++ ++ ++ +E +V
Sbjct: 462 IEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIE--SALV 519
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
D+ + G + D++++ +++ A W A+++ + H
Sbjct: 520 DMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQH 556
>gi|242082329|ref|XP_002445933.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
gi|241942283|gb|EES15428.1| hypothetical protein SORBIDRAFT_07g028280 [Sorghum bicolor]
Length = 498
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 259/458 (56%), Gaps = 39/458 (8%)
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
+ +LS L+F F+ N ++ + P + + + + + ++ +H+TFP L
Sbjct: 41 AAALSSLYFPLFPSSATFLHNLLIHASAASPSPRLSFAAFSSLLRSGYLP-DHFTFPPLV 99
Query: 165 KVCAGIRSL-REGKKVHARIVKCGFELDLFVRNSLIHMYSV------------------- 204
K + + S R G +V+A+ + GF D FV NSL+ MY+
Sbjct: 100 KSASRLSSFPRTGAQVYAQAARRGFLADTFVVNSLLAMYAAFRDTASMRAVFESCAEVAD 159
Query: 205 -------------CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
CGE+ +AR+VF++ P + V+W+ M+ Y E+ ARE+FD MP
Sbjct: 160 VVSWNTVVFGYAKCGEIGNARRVFDEMPHRNGVSWSVMVGAYAAAGELDVAREMFDRMPA 219
Query: 252 --RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
R+I TWN M++G+ G + A +FD MP R++VSWN M+ GYA G + AR FD
Sbjct: 220 IGRNIITWNLMVTGFGRHGLLPLARKMFDEMPIRNIVSWNAMLRGYAMNGEMDVARELFD 279
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKPNEASLMSVLTACANMGVID 368
M ++VVSW +++ Y + Y + L LF M GD +PNE +++SVL+ACA++ ++
Sbjct: 280 VMPEKDVVSWTCMISGYAQAGRYAQTLELFRTMQSHGDIRPNEVTMVSVLSACAHLTALE 339
Query: 369 IGQWIHSYIQKCRIKPD--VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
G+W H +I K ++ D L +L+ MYAKCG DLA +F ++ +KNV +WN++I G
Sbjct: 340 EGRWAHVFIDKHKMVLDNEFNLGAALIDMYAKCGRTDLATKIFHSLDQKNVSAWNALITG 399
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
++ + +++F +M+ P+D TF+ VL+AC HAG+V EG YF M ++P
Sbjct: 400 LAVNSDARRCIDVFEQMKMSEEKPDDITFVSVLTACAHAGLVDEGRQYFQSMSSACGVQP 459
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
+++HYGCMVDLLGRAGL+ ++EEL+ +PM L G
Sbjct: 460 ELKHYGCMVDLLGRAGLLDEAEELIRGMPMAPDVKLLG 497
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 163/381 (42%), Gaps = 50/381 (13%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q++ Q G D+F + +L + S+ +F + D NT++ +
Sbjct: 114 QVYAQAARRGFLADTFVVNSLLAMYAAFRDTASMRAVFESCAEVADVVSWNTVVFGYAKC 173
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ A ++ + N ++ ++ A L +++ R+ G ++
Sbjct: 174 GEIGNA-----RRVFDEMPHRNGVSWSVMVGAYAAAGELDVAREMFDRMPAIG--RNIIT 226
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
N ++ + G + ARK+F++ P+ ++V+WN+M+ GY N E+ ARELFD MPE+D+
Sbjct: 227 WNLMVTGFGRHGLLPLARKMFDEMPIRNIVSWNAMLRGYAMNGEMDVARELFDVMPEKDV 286
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN------------------------- 289
+W MISGY G LF M + N
Sbjct: 287 VSWTCMISGYAQAGRYAQTLELFRTMQSHGDIRPNEVTMVSVLSACAHLTALEEGRWAHV 346
Query: 290 -----------------CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
+ID YAK G A F + +NV +WN L+ D
Sbjct: 347 FIDKHKMVLDNEFNLGAALIDMYAKCGRTDLATKIFHSLDQKNVSAWNALITGLAVNSDA 406
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTS 391
C+ +F++M + KP++ + +SVLTACA+ G++D G Q+ S C ++P++
Sbjct: 407 RRCIDVFEQMKMSEEKPDDITFVSVLTACAHAGLVDEGRQYFQSMSSACGVQPELKHYGC 466
Query: 392 LLTMYAKCGVMDLARNVFDNM 412
++ + + G++D A + M
Sbjct: 467 MVDLLGRAGLLDEAEELIRGM 487
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 277/545 (50%), Gaps = 65/545 (11%)
Query: 51 LPIVDLSH-PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLS 109
L + L H P L + ++ E Q+H LL + S SRV +C SS S +
Sbjct: 8 LHVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRV-ASVCAFNSSFSYA 66
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
L F + + NT ++SF + P A+S +Y ++ + +HYT
Sbjct: 67 KLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFY-RLREFDISPDHYT---------- 115
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
C F L C +LD R +
Sbjct: 116 ----------------CSFVL------------KACSRLLDVRN-------------GKI 134
Query: 230 IDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
+ GYV+ ++G + ++F N ++ Y G++ A +FD MP RDV++WN
Sbjct: 135 VHGYVE--KLGL---------QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
MI K+G+ A F M RNV SW ++ Y +C E + LF M P
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP 243
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
NE ++++VL ACA+MG + +G+ IH + + + ++ + +L+ MY KCG ++ A +F
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
DNM E+ VVSW++MI G HG+ E AL +F +M G PN TFI +L AC+H GMV
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+G YF M R Y I P++EHYGCMVDL RAGL++++ E + +P+ +WGALL
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H N +L + +HL +L+P + G YV+LSNIYA G+W++V +R++M+++ ++K
Sbjct: 424 CKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTP 483
Query: 590 GSSLV 594
G S +
Sbjct: 484 GWSSI 488
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 274/539 (50%), Gaps = 65/539 (12%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
++ IL+ L T +IH L GL Q + + + +C SL V + F
Sbjct: 6 EIERKILRLLHGGKTRSHLTEIHGHFLRHGLQQSNQILAHFVS-VCASLRRVPYATRLFA 64
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
P+ + N I+K+ L+ PF A ++ M + + + YT
Sbjct: 65 HTHNPNILLFNAIIKAH-SLHPPFHASFSFFSLMKTRAISPDEYTL-------------- 109
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
A + K L +V +H + V
Sbjct: 110 ------APLFKSASNLRYYVLGGCVHAHVV------------------------------ 133
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
+GF R + ++ Y M A+ +FD M DVV WN MI G
Sbjct: 134 ---RLGFTRHASVRVAALEV---------YASCERMGDASKVFDEMRDPDVVVWNLMIRG 181
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
+ K+G++ + F +M R VVSWN++++ + + L LF+ M+ +P++ASL
Sbjct: 182 FCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASL 241
Query: 355 MSVLTACANMGVIDIGQWIHSYIQ-KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
++VL CA +G +DIG+WIHSY K ++ + + SL+ Y KCG + A ++F++M
Sbjct: 242 VTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMA 301
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
KNVVSWN+MI G +G+GE + +F EM G PND+TF+ VL+ C H G+V G
Sbjct: 302 SKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRD 361
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
F M +K+ PK+EHYGC+VDLLGR G +R++ +L++ +P++ ALWGALLSAC T+
Sbjct: 362 LFASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTY 421
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+ E+ + A+ L+ LEP + G YVLLSN+YA EG+WDEVE +R +M+ ++K G S
Sbjct: 422 GDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 195/569 (34%), Positives = 302/569 (53%), Gaps = 31/569 (5%)
Query: 81 LVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGA 140
L S D F S + + L V + FD E + + NT++ ++ N P A
Sbjct: 247 LGSDFVDDFFVVSSAIF-MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEA 305
Query: 141 LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
+ + + M ++ + TF + ++ L G+++HA I+K L + + N++I
Sbjct: 306 IDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIV 365
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR------EVGFARELFDFMPERDI 254
MYS CG + + KVF + D+VTWN+M+ +V+N + FA + FM D
Sbjct: 366 MYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMV--DS 423
Query: 255 FTWNSMIS-----GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
T +++S ++G A + + F + S+ +ID YAK G +T+A+ F+
Sbjct: 424 VTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSY--LIDMYAKSGLITTAQQLFE 481
Query: 310 RMCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
+ R+ +WN ++A Y + E +F +MI + +PN +L S+L AC MG I
Sbjct: 482 KNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTI 541
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+G+ IH + +C + +V + T+LL MY+K G + A NVF EKN V++ +MI Y
Sbjct: 542 GLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSY 601
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
G HG GE+AL +F M G P+ TF+ +LSAC++AG+V EG F M+R YKI+P
Sbjct: 602 GQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPS 661
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP-ALWGALLSACSTHSNSELGKIVAQHL 546
EHY C+ D+LGR G + ++ E V L E +WG+LL AC H ELGK+VA L
Sbjct: 662 AEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKL 721
Query: 547 MELEPRDP--GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV----HPGEFA 600
+E+E G +VLLSNIYA+EG WD V+ +R+ M++K L K G S V H F
Sbjct: 722 LEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFM 781
Query: 601 SESIVENCPPHRKCI-VYSMLGEIGAQMK 628
S H +C +Y ML ++ +MK
Sbjct: 782 SRD-----HKHPQCAEIYQMLEKLAMEMK 805
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 226/478 (47%), Gaps = 34/478 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I P + NTI+ F+ N P AL FY + + + YTF K CA R
Sbjct: 59 LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC-------GEVLD------ARKVFEDG 218
SL+ GK +H +++ F V NSL++MYS C G D R+VF+
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAAN 274
++V WN+MI YVK + A ++F M I ++ ++ + D + AN
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNAN 238
Query: 275 GLFDLMP------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
L+ L+ D + I YA++G V AR FD RN WN ++ YV+
Sbjct: 239 VLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQ 298
Query: 329 CKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
E + LF +++ + ++ + +S LTA + + +++G+ +H+YI K V+
Sbjct: 299 NNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVV 358
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+ +++ MY++CG + + VF NM E++VV+WN+M+ + +G ++ L + M+K+G
Sbjct: 359 ILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQG 418
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC---MVDLLGRAGLM 504
+ T +LS ++ G Y I ++ G ++D+ ++GL+
Sbjct: 419 FMVDSVTLTALLSLASNLRSQEIG-----KQAHAYLIRHGIQFEGMDSYLIDMYAKSGLI 473
Query: 505 RDSEELVSK-LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
+++L K + A W A+++ + + SE G V + ++E R P L S
Sbjct: 474 TTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVR-PNAVTLAS 530
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 135/298 (45%), Gaps = 30/298 (10%)
Query: 194 VRNSLIHMYSVC--GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE-----VGFARELF 246
+R+ L H+ C G A +F+ P V WN++I G++ N + +AR
Sbjct: 40 IRSRLSHL---CRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRA 96
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAK----- 297
P+ D +T++S + ++ L + +N +++ Y+
Sbjct: 97 SPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEV 156
Query: 298 --IGNVTSARNC------FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
+G NC FD M RNVV+WN +++ YV+ + E ++F M+R +P
Sbjct: 157 PYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRP 216
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKCGVMDLARN 407
S ++V A M D ++ + K D + +S + MYA+ G +D AR
Sbjct: 217 TPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFARE 276
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME-MEKRGPTPNDATFICVLSACTH 464
+FD E+N WN+MI GY + +A+++F++ ME +D TF+ L+A +
Sbjct: 277 IFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQ 334
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 256/486 (52%), Gaps = 45/486 (9%)
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
E KK+HA +VK F+ ++ M + GE A +F+ + +N+MI Y
Sbjct: 3 ELKKIHAHVVKFSLSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRAYK 62
Query: 235 KNREVGFAREL--------------------------------------------FDFMP 250
N+ A + F F P
Sbjct: 63 HNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKFGP 122
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+ + NS++ YV ++ A+ +F+ M RD VSWN +I G+ ++G + AR F+
Sbjct: 123 KSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEE 182
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+ + + SW +++ Y R + L F RM D + +E SL+SVL ACA +G +++G
Sbjct: 183 LQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALELG 242
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+WIH Y K D+ + +L+ +YAK G MD R +F M E++V+SW++MI+G H
Sbjct: 243 KWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLANH 302
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+ +A+E+F EM+K PN TF+ +LSAC HAG++ EG YF+ M+R IEP VEH
Sbjct: 303 GRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEPGVEH 362
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGC+V+LLG +G + + EL+ K+PM+ +WG L S+C +H N E+ I +HL+ELE
Sbjct: 363 YGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAMEHLLELE 422
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASE-SIVENCP 609
P D G Y+ LSN+YA GKWD V +R++M K + K G S + E + ++
Sbjct: 423 PDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQEYASGDDSK 482
Query: 610 PHRKCI 615
P K I
Sbjct: 483 PFSKAI 488
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 202/442 (45%), Gaps = 64/442 (14%)
Query: 72 EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF 131
E +IH ++ LS SF ++++ +C + L F + +P+AF+ N +++++
Sbjct: 3 ELKKIHAHVVKFSLSXSSFLVTKMVD-MCNHHGETEYANLLFKRVADPNAFLYNAMIRAY 61
Query: 132 LMLNDPFGALSFYYEKMMAKFVEHNH---------YTFPLLGKVCAGIRSLREGKKVHAR 182
++ L+ K M + H+H +TFP + K CAG+ GK+VH
Sbjct: 62 K--HNKVYILAITVHKQM---LGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGH 116
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
K G + + + NSL+ MY C + DA +VFE+ D V+WN++I G+V+ ++ A
Sbjct: 117 AFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRA 176
Query: 243 RELFDFMPERDIFTWNSMISGYVDVG---------------DMEAAN-GLFDLMP----- 281
R +F+ + ++ IF+W +++SGY +G D+E L ++P
Sbjct: 177 RAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQL 236
Query: 282 ------------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
RD+ N +I+ YAK G++ R F +M R+V+SW+ ++
Sbjct: 237 GALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMI 296
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRI 382
E + LF M + +PN + + +L+ACA+ G+++ G + S + I
Sbjct: 297 VGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNI 356
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGE---KALE 438
+P V L+ + G +D A + M K + W + HG E A+E
Sbjct: 357 EPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAME 416
Query: 439 MFMEMEKRGPTPNDATFICVLS 460
+E+E P+D LS
Sbjct: 417 HLLELE-----PDDTGNYITLS 433
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 258/471 (54%), Gaps = 9/471 (1%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA ++L + +HA + + D F+ NSLIHMY CG V DAR VF+ P D+V+
Sbjct: 69 ACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVS 128
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
W +I GY +N +G ++ + FT+ S++ G + L
Sbjct: 129 WTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAV 188
Query: 282 F----RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
DV + ++D YA+ + A FDR+ +N VSWN L+A + R D L
Sbjct: 189 KYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLM 248
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
F M R + S+ +A A +G ++ G+W+H+++ K K + ++L MYA
Sbjct: 249 KFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYA 308
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
K G M AR VFD M ++++V+WN+M+ +G G++A+ F E+ K G N TF+
Sbjct: 309 KSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLS 368
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
VL+AC+H G+V EG YFD+M+ Y ++P+++HY VDLLGRAGL++++ V K+PME
Sbjct: 369 VLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME 427
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLR 577
A+WGALL AC H N+++G+ A H+ EL+P D GP VLL NIYAS GKW++ +R
Sbjct: 428 PTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVR 487
Query: 578 RIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
++MK ++K S V + ++ + +Y M EI ++K
Sbjct: 488 KMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIK 538
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 185/411 (45%), Gaps = 14/411 (3%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P L H I+ + IH L S L+ D+F + ++ C +VS +
Sbjct: 58 PTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYC-KCGAVSDARH 116
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + D ++ + P A+ + + A+F N +TF L K
Sbjct: 117 VFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARF-RPNGFTFTSLLKATGACG 175
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
G+++HA VK ++ D++V ++L+ MY+ C ++ A VF+ + V+WN++I
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFD--LMPFRDV 285
G+ + + F M FT++SM S + +G +E + + + +
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295
Query: 286 VSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
++ N M+ YAK G++ AR FDRM R++V+WN +L + E + F+ +
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIR 355
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ + N+ + +SVLTAC++ G++ G+ ++ ++P++ S + + + G++
Sbjct: 356 KCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLK 415
Query: 404 LAR-NVFDNMTEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
A VF E W +++ MH G+ A + E++ P
Sbjct: 416 EALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGP 466
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 2/202 (0%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
LR D + G+ P S++ ACA + + IH+++ + + D L SL+ M
Sbjct: 45 LRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHM 104
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG + AR+VFD M ++VVSW +I GY + +A+ + +M + PN TF
Sbjct: 105 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 164
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+L A G G L + Y + V ++D+ R M D +V
Sbjct: 165 TSLLKATGACGGCSIGEQMHALAVK-YNWDEDVYVGSALLDMYARCEQM-DMAIMVFDRL 222
Query: 516 MEAGPALWGALLSACSTHSNSE 537
+ W AL++ + ++ E
Sbjct: 223 VSKNEVSWNALIAGFARKADGE 244
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 272/464 (58%), Gaps = 12/464 (2%)
Query: 180 HARIVKCGFELDLFVR---------NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+AR + LDLF R N+++ + CG + DA ++F + D+V+W +M+
Sbjct: 149 YARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMV 208
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
G KN V ARE+FD MP R++ +WN+MI+GY G + A LF+ MP RD+ SWN
Sbjct: 209 AGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNT 268
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KP 349
M+ G+ + G++ A F M +NV++W ++ YV+ E L+LF++M D KP
Sbjct: 269 MVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKP 328
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ ++VL AC+++ + GQ IH I K + + ++L+ MY+KCG +A+ +F
Sbjct: 329 TTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMF 388
Query: 410 DN--MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
D+ ++++WN MI Y HG G +A+ +F +M++ G ND T++ +L+AC+HAG+
Sbjct: 389 DDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGL 448
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
EG+ YFD + + I+ + +HY C++DL GRAG + ++ ++ L E +LWGALL
Sbjct: 449 FDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALL 508
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+ CS H N+++GK+VA ++++EP + Y+L SN+YAS G +E N+R MK+K L+K
Sbjct: 509 AGCSVHGNADIGKLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKK 568
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCR 631
G S + G +V + + ++ +L ++ +MK R
Sbjct: 569 QPGCSWIDVGNTVQVFVVNDKSHSQFEMLKYLLLDLHTKMKKNR 612
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 150/281 (53%), Gaps = 40/281 (14%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+ V +++ Y + +A ++F + PV ++V+WN+MIDGY +N A +LF MPE
Sbjct: 108 VIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPE 167
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R++ +WN++++ G ++ A LF+ M RDVVSW M+ G +K G V +AR FD+M
Sbjct: 168 RNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKM 227
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
+RNVVSWN ++A Y + + E L+LF+RM P D+
Sbjct: 228 PIRNVVSWNAMIAGYAQNGRFDEALKLFERM------PER----------------DMPS 265
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
W +++T + + G ++ A +F M +KNV++W +M+ GY HG
Sbjct: 266 W-----------------NTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHG 308
Query: 432 QGEKALEMFMEMEKR-GPTPNDATFICVLSACTHAGMVLEG 471
E+AL++F +M+ G P TF+ VL AC+ + EG
Sbjct: 309 LSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEG 349
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 165/348 (47%), Gaps = 45/348 (12%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF-RDV 285
N I + +V AR++FD M +RD W +MISGY+ G + A LFD + V
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
+ W M+ GY K+ + A F+ M +RNVVSWN ++ Y R E L LF RM
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM--- 165
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+ N S +V+TA A+ G ID + + + ++ + DV+ T+++ +K G +D A
Sbjct: 166 -PERNVVSWNTVMTALAHCGRIDDAERLFNEMR----ERDVVSWTTMVAGLSKNGRVDAA 220
Query: 406 RNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG------------------ 447
R VFD M +NVVSWN+MI GY +G+ ++AL++F M +R
Sbjct: 221 REVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLN 280
Query: 448 ---------PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
P N T+ +++ G+ E F+ MQ ++P G V +L
Sbjct: 281 RAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTT---GTFVTVL 337
Query: 499 GR----AGLMRDSE--ELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
G AGL + +++SK + + AL++ S + + K
Sbjct: 338 GACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAK 385
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF + C+ + L EG+++H I K F+ +V ++LI+MYS CG+ A+K+F+DG
Sbjct: 332 TFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDG 391
Query: 219 PV--WDLVTWNSMIDGYVKNREVGFARELFDFMPE----RDIFTWNSMISGYVDVGDMEA 272
DL+ WN MI Y + A LF+ M E + T+ +++ G +
Sbjct: 392 LSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDE 451
Query: 273 ANGLFD-LMPFRDVV----SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVS-WNILLA 324
FD L+ R + + C+ID + G + A N + + +S W LLA
Sbjct: 452 GFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLA 509
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 393 LTMYAKC--GVMDLARNVFDNMTEKNVVSWN---SMIMGYGMHGQGEKALEMFMEMEKRG 447
L +Y K G +D A +++ M + + + I + G+ ++A+ + EME +G
Sbjct: 675 LIVYVKVSLGDLDFALKMYNEMVRRGFSESSLVYTFIRAFCEKGRVDEAIGLMTEMEGKG 734
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
D T+ CV+ C +G + E W F+ M
Sbjct: 735 LRAYDETYECVIVGCADSGRLNECWSVFEEM 765
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 277/525 (52%), Gaps = 40/525 (7%)
Query: 101 TSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF 160
T + L + FF+ + E D N ++ F+ + D A F+ E V +
Sbjct: 144 TQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVS---WVT 200
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
L G G ++ E +++ ++ ++ N++I Y E+ +A ++FE+ P
Sbjct: 201 MLSGFARNG--NILESRRLFDQMPS----RNIVSWNAMISAYVQRCEIDEASRLFEEMPE 254
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFDFMPER---------------------------- 252
D V+W +MI+GYV+ ++ AREL + MP R
Sbjct: 255 RDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEI 314
Query: 253 ---DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
D+ WN+MI+GY G + A L M +D+V+WN MI YA++G + A F+
Sbjct: 315 GTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFE 374
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
M R++VSWN L+A ++ + L+ F M KP++ S L++CA + + +
Sbjct: 375 EMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQV 434
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGM 429
G +H + K ++++ +L+TMYAKCG + A VF+ + +V+SWNS+I GY +
Sbjct: 435 GNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAI 494
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
+G G++AL++F EM G P++ TFI +LSAC HAGMV G F M ++Y IEP E
Sbjct: 495 NGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAE 554
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HY CMVDLLGR G + ++ E+V + ++A +WGALL AC H N ELG++ A L E
Sbjct: 555 HYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEF 614
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EP YVLLSNI+A +W+EV+ +R +M K G S V
Sbjct: 615 EPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWV 659
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 170/332 (51%), Gaps = 54/332 (16%)
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
C + + N++I Y G V +A+++F++ PV +L++WNSM+ GY +NR++ E
Sbjct: 96 CSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEF 155
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
F+ M ERD+ +WN M+ G++ VGD+++A F +VVSW M+ G+A+ GN+ +R
Sbjct: 156 FNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESR 215
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA--------------KPNE 351
FD+M RN+VSWN +++ YV+ + E RLF+ M D+ K +E
Sbjct: 216 RLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDE 275
Query: 352 A----------------SLMSVLTAC-----ANMGVIDIGQW--------IHSYIQKCRI 382
A +++S C A +IG W I Y RI
Sbjct: 276 ARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRI 335
Query: 383 KPDVLLS-----------TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
+ LS ++++ YA+ G MD A +F+ M E+++VSWNS+I G+ ++G
Sbjct: 336 NEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNG 395
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
Q AL+ F M G P+ +F C LS+C
Sbjct: 396 QNLDALKSFALMGHEGKKPDQLSFACGLSSCA 427
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E + NS+I +Y+ G + AR +F+ P +LV+WN+M+ GY+ N + A +LF
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMP---FRDVVSWNCMIDGYAKIGNVTSAR 305
MP RD+F+W MI+ Y G++E A LFD +P + V WN MI GY K G V A+
Sbjct: 63 MPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAK 122
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FD M ++N++SWN +LA Y + + L F+ M D S ++ +G
Sbjct: 123 RLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDV----VSWNLMVDGFIQVG 178
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+D W + Q+ + KP+V+ ++L+ +A+ G + +R +FD M +N+VSWN+MI
Sbjct: 179 DLD-SAW--KFFQETQ-KPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMIS 234
Query: 426 GYGMHGQGEKALEMFMEMEKR 446
Y + ++A +F EM +R
Sbjct: 235 AYVQRCEIDEASRLFEEMPER 255
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 140/332 (42%), Gaps = 57/332 (17%)
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
M E++ T+NSMIS Y G + AA LFD MP R++VSWN M+ GY G A F
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
M R++ SW +++ Y R + + LFD +
Sbjct: 61 VIMPRRDLFSWTLMITCYTRNGEVEKARELFDSL-------------------------- 94
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
C + V ++++ Y K G ++ A+ +FD M KN++SWNSM+ GY
Sbjct: 95 ----------PCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYT 144
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
+ + LE F EM++R + ++ ++ G + W +F Q+ P V
Sbjct: 145 QNRKMRLGLEFFNEMDER----DVVSWNLMVDGFIQVGDLDSAWKFFQETQK-----PNV 195
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA----CSTHSNSELGKIVAQ 544
+ M+ R G + +S L ++P W A++SA C S L
Sbjct: 196 VSWVTMLSGFARNGNILESRRLFDQMP-SRNIVSWNAMISAYVQRCEIDEASRL------ 248
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
E+ RD + + N Y GK DE L
Sbjct: 249 -FEEMPERDSVSWTTMINGYVRIGKLDEAREL 279
>gi|125528598|gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indica Group]
Length = 548
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 172/503 (34%), Positives = 263/503 (52%), Gaps = 43/503 (8%)
Query: 134 LNDPFGALSFYYEKMM--AKFVEHNHYTFPL---LGKVCAGIRSLREGKKVHARIVKCGF 188
L + + SF E + +K + H + PL L K A G+ +HA VK
Sbjct: 27 LAKVYASNSFLREAAIIYSKLLPHRTHHLPLVIVLLKATASRADPVLGRALHAEAVKSAN 86
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFED----------------GPVWDLV-------- 224
D V +L+ +Y CG + DAR+VF+ D+V
Sbjct: 87 AHDRLVGTTLVSVYCKCGLLADARRVFDGMLDRNAVTCNAMLAGYAAAGDMVSAEALFAG 146
Query: 225 -------TWNSMIDGYVKNREVGFARELFDFMP--ERDIFTWNSMISGYVDVGDMEAANG 275
TW ++I G+ ++ R F+ MP +++ TW + YV GDME A
Sbjct: 147 MGSRTPVTWATLIRGFAGKGDMAETRRWFEAMPLGMQNVVTWTVAVQAYVAAGDMETARE 206
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
LF+ MP R+ W+ M+ G K GN A+ FD++ +RN+V+WN L+A Y + +
Sbjct: 207 LFNKMPARNAFVWSSMVTGNFKAGNADEAQAVFDKIPVRNLVNWNALIAGYAKMGCCEKA 266
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L F M++ KP+E ++ VL+ACA +G ++ + +H++I + RI+ + + L+ M
Sbjct: 267 LEAFHSMLKDKIKPDEFTMAGVLSACAQLGSLEQARKVHNFIIQHRIRKNQFVMNGLVDM 326
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
+AKCG + ARN+FDNM +N WNSMI HGQ +A+ +F +ME PN+ T
Sbjct: 327 FAKCGDLAFARNIFDNMQWRNTECWNSMISALSSHGQSIEAIRLFSKMECSEQKPNEITL 386
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL ACTH G V EG F IY + VEHYGC+VDLLGRAG +R++ E+V +
Sbjct: 387 LAVLGACTHGGFVDEGLRIFSKFD-IYGVAAAVEHYGCLVDLLGRAGRLREAYEIVKNML 445
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR----DPGPYVLLSNIYASEGKWD 571
+E +WG+LL AC H ++E+ ++V+ + +L R + Y+LLSNI AS +W+
Sbjct: 446 VEPNEVIWGSLLGACRVHGDAEMSELVSSEIHQLHSRRVSTNDAEYILLSNIMASSERWE 505
Query: 572 EVENLRRIMKEKELEKAVGSSLV 594
+ E +RR M + K G S V
Sbjct: 506 QAERMRRKMALHGVGKTPGCSSV 528
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 249/459 (54%), Gaps = 41/459 (8%)
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVC--GEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
K++ + + G D F +I +V G++ A +F P WN+M+ +
Sbjct: 30 KQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFT 89
Query: 235 KNREVGFARELFD------FMPERDIFTW------------------------------- 257
+E L+ F+P F++
Sbjct: 90 DKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 149
Query: 258 --NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
N ++ Y M++A LFD RDVV+W +I+GYAK G V AR FD M +N
Sbjct: 150 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 209
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VSW+ ++ Y + + E L LF+ M +PN +++ LTACA +G +D G+WIH+
Sbjct: 210 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 269
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
Y+ + R+ D +L T+L+ MYAKCG ++ A VFD M +++V ++ S+I G HG
Sbjct: 270 YVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSAT 329
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+EMF M+ G PN+ TFIC+LSAC+ G+V EG F M IY IEP V+HYGC+V
Sbjct: 330 AIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLV 389
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLLGRAG++ D++ +V ++P+E + GALL+AC H + ELGK + L E G
Sbjct: 390 DLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGG 449
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+VLLSN+YAS +W++V +R+ M+EK+++K G SL+
Sbjct: 450 VHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLI 488
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 203/424 (47%), Gaps = 43/424 (10%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDG 115
S +L L+ C T+ QI + L VSG D FAA R++ S +S + L F
Sbjct: 13 SRRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLS 72
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+ +F+ NT++++F +P LS Y + F+ +N YTF L + CA + L
Sbjct: 73 LPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNN-YTFSFLLQACAQLSDLSF 131
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G +HA+ V+ G+E FV+N L+H+Y+ C + AR++F+ D+VTW ++I+GY K
Sbjct: 132 GILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAK 191
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP---FR--------- 283
+ +V AR+LFD MPE++ +W++MI+GY +G A LF+ M FR
Sbjct: 192 SGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGA 251
Query: 284 ---------------------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
D + +ID YAK G V +A FD M R+V
Sbjct: 252 LTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDV 311
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HS 375
++ L++ + +F RM PNE + + +L+AC+ +G+++ G I S
Sbjct: 312 FAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKS 371
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGE 434
I+P V L+ + + G+++ A+ V M E + +++ +HG E
Sbjct: 372 MTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVE 431
Query: 435 KALE 438
E
Sbjct: 432 LGKE 435
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 284/516 (55%), Gaps = 41/516 (7%)
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CN ++++ ++ YY+ + A+ + + YT+P + + ++ EG+KVHA
Sbjct: 14 CNVLIRTLARRGSFARVMAVYYD-LRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAA 72
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
VK GF D + +SL+ MY++ G V ARKVF++ P LV WN M+ Y++ A
Sbjct: 73 VKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAV 132
Query: 244 ELFDFM------PER---------------------------DIFTW-----NSMISGYV 265
L + M P+R +F + N+++ Y
Sbjct: 133 ALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFGFSLPVANALLDMYT 192
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G +E A +F MP R+++SW ++ GYA G + AR F + ++++ W ++
Sbjct: 193 KNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINA 252
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
V+ + E L LF M +P++ +++++LT CAN+G +D G+WIH Y + +K D
Sbjct: 253 CVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKID 312
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+L T+L+ MY+KCG +D + +F M ++ +W ++I G +GQ KALE+F EM++
Sbjct: 313 AVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQR 372
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
P+ TFI VL+AC H G+V EG +F M+ IY+IEP++EHY C+V+LLG AGL+
Sbjct: 373 SKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLY 432
Query: 506 DSEELVSKLPMEAGP-ALWGALLSACSTHSNSELGKIVAQHLMELE-PRDPGPYVLLSNI 563
++E+L+ +P+ L+GALL+AC + N E+ + + + + + + ++P VL+SN+
Sbjct: 433 EAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDVNVLMSNV 492
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEF 599
YA+ +W+E +R M ++K G S++ E+
Sbjct: 493 YATASRWEESIRVRSKMTHPAVKKTAGCSMIEVKEY 528
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 9/283 (3%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A C+ M +R+ N+L+ R + + ++ + + + VL A
Sbjct: 2 ATACYHAMPLRDC---NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGV 58
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
M + G+ +H+ K + D ++SLL MY G +D AR VFD M ++ +V WN M
Sbjct: 59 MKLSVEGRKVHAAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMM 118
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
+ Y G+ A+ + EME+ G TP+ T + ++AC+ AG + G M ++
Sbjct: 119 MRCYIRCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFG 178
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
V + ++D+ + G + ++ ++ ++P E W L+S + + +++
Sbjct: 179 FSLPVAN--ALLDMYTKNGYLEEAVKMFQQMP-ERNIISWTILVSGYAVAGQLDKARML- 234
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
+ +D + + N G ++E L R M+ + +E
Sbjct: 235 --FYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVE 275
>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 282/534 (52%), Gaps = 17/534 (3%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH + ++ G++ + A+R+L + S++ + FD DA+M NT++++
Sbjct: 42 IHARAVLLGVAANPAFATRLLA--AAAPCSLAYARRVFDAAPRRDAYMWNTLLRAHAHAQ 99
Query: 136 DPFGALSF----YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD 191
P G+ + Y++M A V + YT+P++ CA R+ R G+ H V+ D
Sbjct: 100 APAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFALAED 159
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWD---LVTWNSMIDGYVKNREVGFARELFDF 248
FV ++LI MY G+V DA +VF +V+W +M+ GY +N G A +F
Sbjct: 160 GFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVTVFGA 219
Query: 249 M-------PERDIFTWNSMISGYVDVGDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGN 300
M E + ++ + G + E +G + F ++ N +I Y K G+
Sbjct: 220 MVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIAMYGKCGS 279
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ +A+ FD M VVSWN ++A+Y + D ++ F RM+ + +L+SVL+A
Sbjct: 280 IAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLSA 339
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
C G ++ G+W+H + + D + L+ MYAKCG + AR FD + E VVSW
Sbjct: 340 CTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSW 399
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
++MI Y HG+ E+AL +F M+ +G PN T VL AC H+G+V EG F+ + R
Sbjct: 400 SAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSIVR 459
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
Y I P +E+Y CMVD+LGRAG + ++ E++ + M+ +WGA L C H N EL +
Sbjct: 460 DYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAE 519
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
VA+ L + D YVL++N+Y G ++ E RR MKE EL+K G SLV
Sbjct: 520 FVAKDLFQSGSNDVTFYVLMANMYFEAGMLEDAERTRRAMKEMELKKTAGHSLV 573
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 260/482 (53%), Gaps = 73/482 (15%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
+E + + L K C + L+EGK VH ++ F+ DL ++NSL+ MY+ CG
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGS----- 124
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEA 272
++G AR LFD MP RD+ +W SMI+GY
Sbjct: 125 -----------------LEG---------ARRLFDEMPHRDMVSWTSMITGYAQNDRASD 158
Query: 273 ANGLFDLMPFRD------------------VVSWNC----------------------MI 292
A LF M D + S+NC ++
Sbjct: 159 ALLLFPRM-LSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLV 217
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
D YA+ G + A FD++ +N VSWN L+A Y R + E L LF RM R +P E
Sbjct: 218 DMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEF 277
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ ++L++C++MG ++ G+W+H+++ K K + +LL MYAK G + A VFD +
Sbjct: 278 TYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL 337
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+ +VVS NSM++GY HG G++A + F EM + G PND TF+ VL+AC+HA ++ EG
Sbjct: 338 VKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGK 397
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF LM R Y IEPKV HY +VDLLGRAGL+ ++ + ++P+E A+WGALL A
Sbjct: 398 HYFGLM-RKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKM 456
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N+E+G AQ + EL+P PG + LL+NIYAS G+W++V +R+IMK+ ++K S
Sbjct: 457 HKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACS 516
Query: 593 LV 594
V
Sbjct: 517 WV 518
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 192/411 (46%), Gaps = 18/411 (4%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVL--KKLCTSLSSVSLS 109
P L + +L++ +KE +H +L S D + +L C SL
Sbjct: 72 PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARR- 130
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
FD + D +++ + ND + +M++ E N +T L K C
Sbjct: 131 --LFDEMPHRDMVSWTSMITGYAQ-NDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGY 187
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+ S G+++HA K G ++FV +SL+ MY+ CG + +A VF+ + V+WN++
Sbjct: 188 MASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNAL 247
Query: 230 IDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFD--LMPFR 283
I GY + E A LF M FT+++++S +G +E L + +
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQ 307
Query: 284 DVVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
+V + N ++ YAK G++ A FD++ +VVS N +L Y + E + FD
Sbjct: 308 KLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
MIR +PN+ + +SVLTAC++ ++D G+ ++K I+P V +++ + + G+
Sbjct: 368 MIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGL 427
Query: 402 MDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGP 448
+D A++ + M E V W +++ MH G A + E++ P
Sbjct: 428 LDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYP 478
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L + D + G +P+ ++L C +G + G+ +H ++ K D+++ SLL M
Sbjct: 59 LHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFM 118
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YA+CG ++ AR +FD M +++VSW SMI GY + + AL +F M G PN+ T
Sbjct: 119 YARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTL 178
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC---------MVDLLGRAGLMRD 506
++ C + ++ ++I+ K YGC +VD+ R G + +
Sbjct: 179 SSLVKCCGYMAS-------YNCGRQIHACCWK---YGCHSNVFVGSSLVDMYARCGYLGE 228
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSE--LGKIVAQHLMELEPRDPGPYVLLSNIY 564
+ + KL + W AL++ + E L V P + LLS+
Sbjct: 229 AMLVFDKLGCK-NEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCS 287
Query: 565 A----SEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
+ +GKW ++ ++L VG++L+H
Sbjct: 288 SMGCLEQGKWLHAHLMK---SSQKLVGYVGNTLLH 319
>gi|255581780|ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528667|gb|EEF30682.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 434
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 256/416 (61%), Gaps = 3/416 (0%)
Query: 64 LESCSTVKEFHQIHT-QLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAF 122
L++ T KE Q+H + + S S ++ + ++++ + F+ IQEP
Sbjct: 15 LKTSKTDKETKQLHALSVKTNTFSHPSISSCLLSLYAEPKINNLEYVLSIFNKIQEPALV 74
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR 182
+ N ++K ++ A++ + +++ +F + +T P + K CA + + +EGK++H
Sbjct: 75 LYNILIKCYIQNQLSHDAITLF-SQLLHEF-NPDGFTLPCVIKGCARLHATKEGKQIHGL 132
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
++K GF L+ FV +SL++MYS C ++ A+KVF DLV+WNS+IDGYVK +V
Sbjct: 133 VLKLGFGLNKFVSSSLVNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYVKCGQVELG 192
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
+LF+ MPERD+F+W +I G+ G ++ A LFD MP R++VSWN MI+GY K G+
Sbjct: 193 MKLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGDFV 252
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
A FD+M +N++SWN ++A Y + + E L LF M+ D PN A+L+S +A +
Sbjct: 253 LASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLERDFTPNHATLVSTFSAVS 312
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+ + G+W+HSY+ K + D +L+TSL+ MY+KCG ++ A +VF +T+K + W +
Sbjct: 313 GLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVFQLITKKKLGHWTA 372
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+I+G GMHG + ALE F EM + G P+ TFI VL+AC+HAG+V +G YFD+M
Sbjct: 373 IIVGLGMHGMADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMM 428
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 301/570 (52%), Gaps = 82/570 (14%)
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL-DL 192
LN+ +L E + + + + T L + CA R+LREGK+VH + G +
Sbjct: 40 LNEAVSSL----ENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGT 95
Query: 193 FVRNSLIHMYSVCGEVLDARKVFEDG-------------------------------PVW 221
F+ N LI+MY+ CG+ ++ARKVF+ P
Sbjct: 96 FLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEK 155
Query: 222 DLVTWNSMI--------------------------DGY---------VKNREVGFARELF 246
D+V+WN+M+ +G+ VK +EVG R++
Sbjct: 156 DVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVH 215
Query: 247 D------FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
F+ ++ +S++ YV G M A LFD M RDV++W M+ GYAK G+
Sbjct: 216 GQILVAGFLS--NVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGD 273
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ SA F M +N VSW L++ Y R + L LF +M+ +P++ + S L A
Sbjct: 274 MKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCA 333
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVS 419
CA++ + G+ IH+Y+ + +P+ ++ ++L+ MY+KCG + + R VFD M K +VV
Sbjct: 334 CASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVL 393
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
WN++I HG GE+A++M +M + G P+ TF+ +L+AC+H+G+V +G +F+ M
Sbjct: 394 WNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMS 453
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
Y I P EHY C++DLLGRAG + + + K+P + +W ALL C H + ELG
Sbjct: 454 CDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELG 513
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGE 598
+ A+ L+ELEP+ YVLLS+IYA G+W+ V+ +R++M E++++K S + +
Sbjct: 514 RKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENK 573
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMK 628
S S+ ++ P ++ I YS+L ++ QM+
Sbjct: 574 VHSFSVSDSSHPLKEQI-YSVLEQLAGQME 602
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 274/475 (57%), Gaps = 16/475 (3%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C ++REG++VHA ++K +E +++R LI +Y+ C + DAR+V ++ P ++V+W
Sbjct: 487 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 546
Query: 227 NSMIDGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANGLFDL 279
+MI GY + G+A E E + FT+ ++++ + + L
Sbjct: 547 TAMISGYSQR---GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSL 603
Query: 280 M---PFRD-VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+ F + + ++D YAK G + AR FD + R+VVS +++ Y + E
Sbjct: 604 VIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEA 663
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L LF R+ R + N + SVLTA + + +D G+ +HS++ + ++ V+L SL+ M
Sbjct: 664 LDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM 723
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDAT 454
Y+KCG + +R +FD+M E+ V+SWN+M++GY HG G +A+E+F M E+ P+ T
Sbjct: 724 YSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 783
Query: 455 FICVLSACTHAGMVLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
F+ VLS C+H GM G +++++ + EP++EHYGC+VDL GRAG + ++ E + K
Sbjct: 784 FLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKK 843
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P E A+WG+LL AC H N +G+ VA+ L+E+E + G YV+LSN+YAS G+WD+V
Sbjct: 844 MPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDV 903
Query: 574 ENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+R +MKEK + K G S + + + RK V++ + E+ ++K
Sbjct: 904 RTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIK 958
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 185/406 (45%), Gaps = 29/406 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASR--VLKKLCTSLSSVSLSVLFFDGIQ 117
+L + S + ++E ++H ++ + + +R VL C L D +
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARR---VLDEMP 539
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
E + ++ + AL + E +M+ N +TF + C + G+
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSG-TAPNEFTFATVLTSCTSSSGFQLGR 598
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H+ ++K FE +FV +SL+ MY+ G++ +AR+VF+ P D+V+ ++I GY
Sbjct: 599 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYA--- 655
Query: 238 EVGFARELFDFMP-------ERDIFTWNSMISGY-----VDVGDMEAANGLFDLMPFRDV 285
++G E D + T+ S+++ +D G ++ L +PF V
Sbjct: 656 QLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY-V 714
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
V N +ID Y+K G++T +R FD M R V+SWN +L Y + E + LF M
Sbjct: 715 VLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEE 774
Query: 346 D-AKPNEASLMSVLTACANMGVIDIGQWIHSYI--QKCRIKPDVLLSTSLLTMYAKCGVM 402
+ KP+ + ++VL+ C++ G+ D G I + QK +P++ ++ ++ + G +
Sbjct: 775 NKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRV 834
Query: 403 DLARNVFDNMT-EKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
+ A M E W S++ +H GE +E+E
Sbjct: 835 EEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE 880
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
SVLT C + I GQ +H+++ K +P V L T L+ +Y KC + AR V D M E+
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
NVVSW +MI GY G +AL +F+EM G PN+ TF VL++CT + G
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
L+ + E + ++D+ +AG + ++ + LP
Sbjct: 602 SLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 286/547 (52%), Gaps = 48/547 (8%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDA--FMCNTIMKSFL 132
Q+H QLL+ GL + AA L S SS + FD + A ++ + S+
Sbjct: 26 QLHAQLLLRGLPLPARAAV----TLIASSSSPQYARAIFDSVPAASANVYLWTATVSSYA 81
Query: 133 MLNDPFGALSFY--YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFEL 190
P A + + M+ N +T + K + +R+ + +VH +VK G
Sbjct: 82 KHASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGLAS 141
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
L V +L+ Y V DAR+V FD MP
Sbjct: 142 SLHVGATLLDSYGNLCRVKDARRV-------------------------------FDEMP 170
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
++ N+M+SGYV GD+EAA +FD M RD +SWN ++ GY + G+ AR+ FD
Sbjct: 171 RSNVVVGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDE 230
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RNV SWN++++ + + + +F++M +P+ A++ +++ACA +G + +
Sbjct: 231 MPQRNVNSWNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFLSVA 290
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ ++ ++K ++ + + SL+ M+AKCG A +F M K+VVS+N M+ H
Sbjct: 291 RQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHH 350
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G G+ AL++F +M + G P+ TF+ VLSAC HAG+V G +YF+ M Y IE +H
Sbjct: 351 GHGKDALKLFEQMIEGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADH 410
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CMVDL GR GL+ ++ V +P++ +WGALL+AC H N ++G++ A+ L+ +E
Sbjct: 411 YACMVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIE 470
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG------SSLVHP---GEFAS 601
P +PG YVLLSN A +WD V ++R++M+ ++K G S+VH G+F+
Sbjct: 471 PMNPGNYVLLSNTLAWSQQWDAVGDVRQLMRGNGIDKNTGFSWVEVESVVHEFLMGDFSH 530
Query: 602 ESIVENC 608
S E C
Sbjct: 531 PSFDEIC 537
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 258/427 (60%), Gaps = 11/427 (2%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSV--CGEVLDARKVFEDGPVWDLVTWNSM 229
S++ +++HA +++ G E +LFV +I +V CG + A +VF D WN+M
Sbjct: 63 SMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIENPDGFLWNTM 122
Query: 230 IDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVG-DMEAANGLFDLMPF-- 282
I G + R+ A E + M + D FT++ ++ +G D+ +++
Sbjct: 123 IRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNVLKHGL 182
Query: 283 -RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
V N ++ Y ++ +A + F+ M +V+WN ++ V C Y E + LF R
Sbjct: 183 EEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFR 242
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M++ KP++A+ + L+ACA +G +DIG+ +HS I + V +S SL+ MYAKCGV
Sbjct: 243 MLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGV 302
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDATFICVLS 460
++ A +F+ M +N+VSWN+MI+G MHG G++ALE+F +M E++ TPN+ TF+ VL
Sbjct: 303 VEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLC 362
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H GMV EG YFD+M+R Y I+P ++HYG MVD+LGRAGL+ ++ L+ +P+E+
Sbjct: 363 ACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNS 422
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W LL+AC H N EL + V Q L+ELEP YVLL+N+YAS G+W++V +R+ M
Sbjct: 423 IVWRTLLAACRVHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSM 482
Query: 581 KEKELEK 587
+ ++K
Sbjct: 483 HIRGVQK 489
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 204/400 (51%), Gaps = 16/400 (4%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS-LSSVSLSVLFFDGIQE 118
++ + C ++K Q+H ++ +GL Q+ F +++ S S+ ++ F I+
Sbjct: 54 VMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIEN 113
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
PD F+ NT+++ P A FY ++M K +++T+ L KVC + S GK+
Sbjct: 114 PDGFLWNTMIRGLGRTRQPEKAFEFY-KRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQ 172
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H ++K G E +FVRN+L+HMY + ++ A +FE+ P LV WN++ID V
Sbjct: 173 IHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGR 232
Query: 239 VGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAA---NGLFDLMPFRDVVSW-NC 290
A ELF M + D T+ +S +G+++ + D +VVS N
Sbjct: 233 YKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNS 292
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD-AKP 349
+ID YAK G V +A F++M RN+VSWN ++ E L LF +M+ A P
Sbjct: 293 LIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATP 352
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
NE + + VL AC++ G+++ G+ +++ I+P + S++ + + G+++ A +
Sbjct: 353 NEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRL 412
Query: 409 FDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
+M E N + W +++ +HG E+ + +E+E
Sbjct: 413 IKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQXLLELE 452
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 242/426 (56%), Gaps = 35/426 (8%)
Query: 202 YSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMI 261
Y+ G + +AR +F P +++ W +M+ YV+N E+ A ELF MP+R++++WN MI
Sbjct: 185 YAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMI 244
Query: 262 SGYVDV-------------------------------GDMEAANGLFDLMPFRDVVSWNC 290
SG ++ G ME A FD MP +D+ +WN
Sbjct: 245 SGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNA 304
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
MI Y G++ A N F+ M +N+VSWN L+ Y R LR M+R + KPN
Sbjct: 305 MITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPN 364
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
E ++ SVLTAC + ++++ Q H + + D +L+ L+T Y++CG + AR +FD
Sbjct: 365 ETTITSVLTACDS--ILELMQ-AHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFD 421
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
+ K++VSW +MI+ Y HG G AL++F M + G P+ TF+ +LSAC+HAG+V +
Sbjct: 422 QLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKK 481
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL-PMEAGPALWGALLSA 529
G FD M Y +EP+ EHY C+VD+LGRAG M + ++VS++ P E A+ GALL A
Sbjct: 482 GQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECDGAVLGALLGA 541
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H + L + + L+E EP G YVLL+N YA+ GKW+E +R+ MKE+ ++K
Sbjct: 542 CRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKEMKERNVKKEP 601
Query: 590 GSSLVH 595
G S +
Sbjct: 602 GFSQIE 607
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 160/343 (46%), Gaps = 62/343 (18%)
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
K+ RI F D + N I + G+V +ARKVF++ P D V++ SMI Y+KN+
Sbjct: 37 KITTRIPFPVFASDTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNK 96
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAK 297
++ A LF +PER++ ++MISGYV G ++ A +FD M R+V SW ++ GY K
Sbjct: 97 DLPQAEILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFK 156
Query: 298 IGNV-------------------------------TSARNCFDRMCMRNVVSWNILLALY 326
IGNV AR+ F++M +N+++W ++ Y
Sbjct: 157 IGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSY 216
Query: 327 VRCKDYCECLRLF-----------DRMIRGDAKPN----------------EASLMSVLT 359
V + E LF + MI G N E S +++T
Sbjct: 217 VENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVT 276
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A G++++ + Y K D+ +++T Y G M A N+F+ M EKN+VS
Sbjct: 277 GLARNGMMELAR---KYFDHMPTK-DIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVS 332
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
WN++I GY +G +L + M + PN+ T VL+AC
Sbjct: 333 WNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTAC 375
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ V S+ E + H ++ GFE D + N L+ YS CG+VL AR +F+ + D
Sbjct: 368 ITSVLTACDSILELMQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKD 427
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFD 278
+V+W +MI Y + A ++F M + D T+ ++S G ++ LFD
Sbjct: 428 IVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFD 487
Query: 279 LMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRM 311
M V ++C++D + G + A M
Sbjct: 488 SMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEM 525
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 289/556 (51%), Gaps = 65/556 (11%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNT 126
CST++E QIH L+ +GL D+ ASRVL C S S ++ + L F I + F+ NT
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 127 IMKSFLMLNDPFGALSFYYEKMMAK-FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
I++ F + P A+S + + + + V+ T+P
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP------------------------ 130
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
S+ Y G+ D R+ + G V +
Sbjct: 131 -----------SVFKAYGRLGQARDGRQ----------------LHGMVIKEGL------ 157
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
E D F N+M+ YV G + A +F M DVV+WN MI G+AK G + A+
Sbjct: 158 -----EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
N FD M RN VSWN +++ +VR + + L +F M D KP+ +++S+L ACA +G
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+WIH YI + R + + ++ T+L+ MY KCG ++ NVF+ +K + WNSMI+
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
G +G E+A+++F E+E+ G P+ +FI VL+AC H+G V +F LM+ Y IE
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P ++HY MV++LG AGL+ ++E L+ +P+E +W +LLSAC N E+ K A+
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
L +L+P + YVLLSN YAS G ++E R +MKE+++EK VG S + +F +
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV-DFEVHEFI 511
Query: 606 ENCPPHRKCI-VYSML 620
H K +YS+L
Sbjct: 512 SCGGTHPKSAEIYSLL 527
>gi|297845488|ref|XP_002890625.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336467|gb|EFH66884.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 298/522 (57%), Gaps = 14/522 (2%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
+++ L SC + E +IH ++ +G+ +D F+ S++L +S+ + + F+ +
Sbjct: 25 QKLVEDLRSCRDIFEVSRIHGYMVKTGIDKDDFSVSKLLA--FSSVLDIRYASSIFEHVS 82
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ +M NT+++ + + ++P A + ++ AK + + ++F K C+ G+
Sbjct: 83 NTNLYMFNTMIRGYSISDEPERAFRVF-NQLRAKGITLDRFSFITTLKSCSRDLCSSIGE 141
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP-VWDLVTWNSMIDGYVKN 236
+H ++ GF + +RN+L+ Y VCG + DARKVF++ P D V+++++++GY++
Sbjct: 142 GLHGIALRSGFMVFTDLRNALLQFYCVCGRINDARKVFDEMPHSVDSVSFSTLMNGYLQV 201
Query: 237 REVGFARELFDFMPERDI----FTWNSMISGYVDVGDM---EAANGLFDLMPFR-DVVSW 288
+ A +LF M ++ T S +S D+G++ E+A+GL + F D+
Sbjct: 202 SKKALALDLFRIMRNSEVPVNVSTLLSFLSATGDLGNLSGAESAHGLCIKIGFNLDLHLI 261
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+I Y KIG++ SAR FD ++VV+WN ++ Y + EC+ L +M K
Sbjct: 262 TALIGMYGKIGDIGSARRIFDCAIRKDVVTWNCMIDQYAKMGILEECVWLLRQMKYERMK 321
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN ++ + +L++CAN +G+ + +++ RI D L T+L+ MYAK G++D A +
Sbjct: 322 PNSSTFVGLLSSCANSEAAFVGRSVADLVEEERIALDAKLGTALVDMYAKLGMLDKAVEI 381
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG--PTPNDATFICVLSACTHAG 466
F+ M +K+V SW +MI GYG HG +A+ +F +ME+ PN+ TF+ VL+AC+H G
Sbjct: 382 FNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGG 441
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+++EG F M Y PKVEHYGC+VDLLGRAG + ++ EL+ LP+ + W AL
Sbjct: 442 LIMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRAL 501
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
L+AC + N++LG+ V L E++ P +L++ +A G
Sbjct: 502 LAACRVYGNADLGESVMMRLAEMDEIHPADAILIAGTHAVAG 543
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 256/462 (55%), Gaps = 47/462 (10%)
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCG---EVLDARKVFEDGPVWDLVTWNSMIDGY 233
+++HA ++ G + L H S+CG ++ A ++F+ ++ +N+MI GY
Sbjct: 26 REIHAHFLRHGLNQ---LNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGY 82
Query: 234 VKNREVGFARELFDFMPERDI----FTWNSMISG-------------------------- 263
N + LF M R I +T ++
Sbjct: 83 SLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFS 142
Query: 264 ---------YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
Y G ME A +FD M RDV+ WN MI G+ K G+V F +M R
Sbjct: 143 AIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRKR 202
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+VVSWNI+++ + + E L LF M+ KP+EA++++VL CA +G +D+G+WIH
Sbjct: 203 SVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIH 262
Query: 375 SYIQKCRIKPD-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
SY + + D V + +L+ Y K G+ + AR VFD M KNV+SWN++I G ++G G
Sbjct: 263 SYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNVISWNTLISGLALNGNG 322
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
E +E+ EM G PNDATF+ VLS C HAG+ G M ++IEPK+EHYGC
Sbjct: 323 ELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYGC 382
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEA-GPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
MVDLLGR+G +R++ +L+ +P A ALWG+LLSAC TH + EL + + L++LEP
Sbjct: 383 MVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEPW 442
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ G YVLLSN+YA E +WD+V N+R +M+EK ++K G S++
Sbjct: 443 NSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQSVI 484
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 191/425 (44%), Gaps = 45/425 (10%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
++ IL+ L T + +IH L GL+Q + S + +C SL+ ++ + F
Sbjct: 7 EIERNILRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVS-ICGSLNKMAYANRIFK 65
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
Q P + N ++K + LN PF + M + + + YT L K C+ + L+
Sbjct: 66 QTQNPTIILFNAMIKGY-SLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQ 124
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
GK +H ++ GFE +R +I +YS CG + DA KVF++ D++ WN MI G+
Sbjct: 125 LGKCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFC 184
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD---------------- 278
K +V LF M +R + +WN MIS A GLF
Sbjct: 185 KRGDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVT 244
Query: 279 LMP-----------------------FRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMR 314
++P +RD V+ N ++D Y K G +AR FD M +
Sbjct: 245 VLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRK 304
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWI 373
NV+SWN L++ + + L + M+ +PN+A+ + VL+ CA+ G+ + G + +
Sbjct: 305 NVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELL 364
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM--TEKNVVSWNSMIMGYGMHG 431
S ++ +I+P + ++ + + G + A ++ M N W S++ HG
Sbjct: 365 ASMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHG 424
Query: 432 QGEKA 436
E A
Sbjct: 425 DVELA 429
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 269/481 (55%), Gaps = 45/481 (9%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
VE N T +L + C EG ++H ++ GF++D ++ NS+I MYS C + DA
Sbjct: 262 VEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSI-DA- 319
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEA 272
A + FD M ++DI TWNS+I+GYV G++E
Sbjct: 320 -----------------------------AAKQFDLMVKKDIVTWNSLITGYVQSGNLEK 350
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A LF+ MP +DVVSW +I G+A G + F M ++ ++W +++ V ++Y
Sbjct: 351 AVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEY 410
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
F +M++ KPN +L VL+A A+M +++ G IH+ + K ++ D+ + SL
Sbjct: 411 EIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSL 470
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
++MY+KCG +D A +F + NVV++N++I G +G G++ALE+F +M+ PN
Sbjct: 471 VSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNH 530
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF+ VLSAC H G+V EG YFDLM+ +Y I+P+ +HY CMVDLL RAG+ ++ LVS
Sbjct: 531 ITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVS 590
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
+P + +WGA+L A TH ++ ++ AQ+L ELEP PYV+LSN+++ G +
Sbjct: 591 SMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERK 650
Query: 573 VENLRRIMKEKELEKAVGSS---------LVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
E +R + K + L+K+ G S L H G + ++I E I+Y++ E+
Sbjct: 651 HELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTE-----IIYALAEEV 705
Query: 624 G 624
G
Sbjct: 706 G 706
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 29/279 (10%)
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
+L+ Y+ E+ AR+VF P ++ ++N+MI Y + V A ELF MP+R+ +
Sbjct: 83 ALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVS 142
Query: 257 WNSMISGYV-----------------------------DVGDMEAANGLFDLMPFRDVVS 287
+ +MI+G+V VG +E A +FD M +DVVS
Sbjct: 143 YATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVS 202
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
W+ MI G ++G + AR FD+M RNVV+W +++ Y++ + LF M R
Sbjct: 203 WSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGV 262
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+ N +L +L AC + G IH + D L+ S++TMY++C +D A
Sbjct: 263 EVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAK 322
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
FD M +K++V+WNS+I GY G EKA+ +F M ++
Sbjct: 323 QFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQK 361
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 167/381 (43%), Gaps = 21/381 (5%)
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
LV NS I +N + A +F+ MP ++ +W ++++ Y + ++ A +F+ +P
Sbjct: 47 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 106
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+V S+N MI Y + V A F M RN VS+ ++ +V + +L
Sbjct: 107 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHRE- 165
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
KP S ++ + +G ++ I + + DV+ +S+++ + G +
Sbjct: 166 -----KPVIVSSNVLINGYSKVGRVEDAVRIFDGMA----EKDVVSWSSMISGLCRVGKI 216
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
AR +FD M ++NVV+W MI GY + +F+ M + G N T +L AC
Sbjct: 217 VEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEAC 276
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
EG + + + V+ Y ++ + R + D+ L ++
Sbjct: 277 GSFDRYGEG---IQIHGLVLSLGFDVDAYLANSIITMYSRCYSI-DAAAKQFDLMVKKDI 332
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
W +L++ N E + +++ + +D + L +ASEG+ DE L ++M
Sbjct: 333 VTWNSLITGYVQSGNLEKAVFLFENMPQ---KDVVSWTTLICGFASEGRIDEFIGLFQMM 389
Query: 581 KEKELE--KAVGSSLVHPGEF 599
EK+ AV S LV E+
Sbjct: 390 PEKDAIAWTAVISGLVSIEEY 410
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 249/459 (54%), Gaps = 41/459 (8%)
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVC--GEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
K++ + + G D F +I +V G++ A +F P WN+M+ +
Sbjct: 5 KQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFT 64
Query: 235 KNREVGFARELFD------FMPERDIFTW------------------------------- 257
+E L+ F+P F++
Sbjct: 65 DKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 124
Query: 258 --NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
N ++ Y M++A LFD RDVV+W +I+GYAK G V AR FD M +N
Sbjct: 125 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 184
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VSW+ ++ Y + + E L LF+ M +PN +++ LTACA +G +D G+WIH+
Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 244
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
Y+ + R+ D +L T+L+ MYAKCG ++ A VFD M +++V ++ S+I G HG
Sbjct: 245 YVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSAT 304
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+EMF M+ G PN+ TFIC+LSAC+ G+V EG F M IY IEP V+HYGC+V
Sbjct: 305 AIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLV 364
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLLGRAG++ D++ +V ++P+E + GALL+AC H + ELGK + L E G
Sbjct: 365 DLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGG 424
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+VLLSN+YAS +W++V +R+ M+EK+++K G SL+
Sbjct: 425 VHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLI 463
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 195/406 (48%), Gaps = 43/406 (10%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
QI + L VSG D FAA R++ S +S + L F + +F+ NT++++F
Sbjct: 6 QIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFTD 65
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
+P LS Y + F+ +N YTF L + CA + L G +HA+ V+ G+E F
Sbjct: 66 KKEPATVLSLYKYMLSTGFLPNN-YTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 124
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V+N L+H+Y+ C + AR++F+ D+VTW ++I+GY K+ +V AR+LFD MPE++
Sbjct: 125 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 184
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMP---FR--------------------------- 283
+W++MI+GY +G A LF+ M FR
Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 244
Query: 284 ---------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
D + +ID YAK G V +A FD M R+V ++ L++
Sbjct: 245 YVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSAT 304
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIKPDVLLSTSLL 393
+ +F RM PNE + + +L+AC+ +G+++ G I S I+P V L+
Sbjct: 305 AIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLV 364
Query: 394 TMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALE 438
+ + G+++ A+ V M E + +++ +HG E E
Sbjct: 365 DLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKE 410
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 276/530 (52%), Gaps = 42/530 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
++H L+ +G ++ + AS L T +S + FD I + ++ S
Sbjct: 48 KLHAHLVTNGFARFNVVASN-LVSFYTCCGQLSHARKLFDKIPTTNVRRWIALIGSCARC 106
Query: 135 NDPFGALSFYYEKMMAKFVEHNH-YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
AL+ + E + + N+ + P + K C + G+K+H I+KC FELD F
Sbjct: 107 GFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKIHGFILKCSFELDSF 166
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V +SLI MYS C +V DARKV FD M +D
Sbjct: 167 VSSSLIVMYSKCAKVEDARKV-------------------------------FDGMTVKD 195
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARNCFD 309
N++++GYV G A GL + M +VV+WN +I G+++ G+ F
Sbjct: 196 TVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFR 255
Query: 310 RMCMR----NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
M +VVSW +++ +V+ E F +M+ P A++ ++L ACA
Sbjct: 256 LMIADGVEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAA 315
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ +G+ IH Y ++ D+ + ++L+ MYAKCG + ARN+F M EKN V+WNS+I
Sbjct: 316 RVSVGREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIF 375
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDA-TFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
G+ HG E+A+E+F +MEK G D TF L+AC+H G G F +MQ Y I
Sbjct: 376 GFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQRLFKIMQEKYSI 435
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
EP++EHY CMVDLLGRAG + ++ ++ +P+E +WGALL+AC H + EL ++ A
Sbjct: 436 EPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDLFVWGALLAACRNHRHVELAEVAAM 495
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
HLMELEP +LLS++YA GKW + E +++ +K+ +L K G S +
Sbjct: 496 HLMELEPESAANPLLLSSVYADAGKWGKFERVKKRIKKGKLRKLQGLSWI 545
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 266/462 (57%), Gaps = 17/462 (3%)
Query: 144 YYEKMMAKFVEHN-HYTFPLLG---KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI 199
+ ++ A F+ H H + +L VCA + ++ ++ ++F+ NS+I
Sbjct: 24 HLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQ----SHNPNIFLFNSII 79
Query: 200 HMYSVCGEVLDARKVFEDGP----VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
+S+ + +F V D T+ ++ E + + + R +
Sbjct: 80 KAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFY 139
Query: 256 TWNSMISG----YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
+ S+ G YV ME A +FD M RDVV WN MI G+ K GNV F +M
Sbjct: 140 CFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFRQM 199
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
R++VSWN +++ + + E L LF +M KP+E +++++L C+ +G +++GQ
Sbjct: 200 SERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQ 259
Query: 372 WIHSYIQ-KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
IHSY K + + SL+ Y KCG ++ A N+F MT K+VVSWN++I+G+ ++
Sbjct: 260 RIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALN 319
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+GE A+++FMEM K PNDATF+ VL+AC H+G++ +G F M Y+I+PK+EH
Sbjct: 320 GKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEH 379
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
+GCMVDLLGR G + ++ +L+ +PM+ LWGA+L AC TH N +L ++ + L+ LE
Sbjct: 380 FGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLE 439
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
P + G YVLLSN+ A EG+W+EVEN+R+ M+EK ++KA G S
Sbjct: 440 PWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 195/438 (44%), Gaps = 51/438 (11%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFF 113
+++ IL+ L + QIH L GL Q + + + +C S + ++ + F
Sbjct: 6 MEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFIS-VCASFNRIAYADRLF 64
Query: 114 DGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
P+ F+ N+I+K+ L+ PF + M + + YTF L K CA +
Sbjct: 65 SQSHNPNIFLFNSIIKAH-SLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEY 123
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
G+ V + + + GF +R ++ +Y C ++ DA K+F++ D+V WN MI G+
Sbjct: 124 SLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGF 183
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMIS------------------------------- 262
K V F LF M ER + +WN++IS
Sbjct: 184 CKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVV 243
Query: 263 ---------GYVDVGD--MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
G ++VG A+ +L+ V N +ID Y K GN+ A N F +M
Sbjct: 244 TMLPVCSRLGALEVGQRIHSYASSKGNLVGITTV--GNSLIDFYCKCGNIEKAYNIFQKM 301
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ 371
++VVSWN ++ + + LF M + KPN+A+ ++VLTAC + G+++ G+
Sbjct: 302 TCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGR 361
Query: 372 WIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGM 429
+ S + + I+P + ++ + + G ++ A + +M + N W +++
Sbjct: 362 ELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRT 421
Query: 430 HGQ---GEKALEMFMEME 444
HG E A++ + +E
Sbjct: 422 HGNLKLAEMAVKELISLE 439
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 261/447 (58%), Gaps = 8/447 (1%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
N++T K C G+ + GK VH +K ++ DLFV +L+ +Y+ GE++DA+++F
Sbjct: 236 NNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLF 295
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDME 271
E+ P DL+ W+ MI Y ++ A +LF M + + FT+ S++ ++
Sbjct: 296 EEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLD 355
Query: 272 AANGLFD-LMPF---RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
+ ++ F +V N ++D YAK G + ++ F+ + RN V+WN ++ YV
Sbjct: 356 LGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYV 415
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+ D + LF M+ D +P E + SVL A A++ ++ G IHS K D +
Sbjct: 416 QLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTV 475
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
++ SL+ MYAKCG ++ AR FD M +++ VSWN+MI GY MHG +AL +F M+
Sbjct: 476 VANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTD 535
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN TF+ VLSAC++AG++ +G +F+ M + Y I+P +EHY CMV LLGR G ++
Sbjct: 536 CKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEA 595
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+L+ ++ + +W ALL AC H +LG++ AQH++E+EP D +VLLSN+YA+
Sbjct: 596 MKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATA 655
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLV 594
G+WD V +R+ M++K++ K G S V
Sbjct: 656 GRWDNVAFVRKYMQKKKVRKEPGLSWV 682
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 223/475 (46%), Gaps = 22/475 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+H +L G S D FA + +L S S S LF D + + + T+ + +
Sbjct: 56 HLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLF-DEMPQTNTISFVTLAQGYSRD 114
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ AL F ++ + E N + F L K+ + +HA + K G D FV
Sbjct: 115 HQFHQALHFIL-RIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
+LI YSV G V AR VF+D D+V+W M+ Y +N + +LF+ M
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 255 FTWNSMISGYV---------DVGDME---AANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
N ISG + +VG A G +D D+ +++ YAK G +
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYD----HDLFVGIALLELYAKSGEII 289
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
A+ F+ M +++ W++++A Y + E L LF RM + PN + SVL ACA
Sbjct: 290 DAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA 349
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+ +D+G+ IHS + K + +V +S +++ +YAKCG ++ + +F+ + ++N V+WN+
Sbjct: 350 SSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNT 409
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL-MQRI 481
+I+GY G GE+A+ +F M + P + T+ VL A + G L ++ +
Sbjct: 410 IIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM 469
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
Y + V ++D+ + G + D+ K+ + W A++ S H S
Sbjct: 470 YNKDTVVA--NSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHGMS 521
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 188/384 (48%), Gaps = 16/384 (4%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
GK +H I+K G LDLF +N L++ Y + DA K+F++ P + +++ ++ GY +
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 236 NRE----VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN-------GLFDLMPFRD 284
+ + + F +F E + F + +++ V M+ A+ ++ L D
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVS---MDLAHLCWTLHACVYKLGHHAD 170
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+ID Y+ GNV AR+ FD +C +++VSW ++A Y Y E L+LF++M
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
KPN ++ L +C + ++G+ +H K D+ + +LL +YAK G +
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIID 290
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A+ +F+ M + +++ W+ MI Y + ++AL++F+ M + PN+ TF VL AC
Sbjct: 291 AQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS 350
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
+ + G + + + + V ++D+ + G + +S +L +LP + W
Sbjct: 351 SVSLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVTWN 408
Query: 525 ALLSACSTHSNSELGKIVAQHLME 548
++ + E + H++E
Sbjct: 409 TIIVGYVQLGDGERAMNLFTHMLE 432
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 17/342 (4%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+LQ S ++ QIH+ +L GL+ + F ++ ++ + + S+ F+ + +
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIM-DVYAKCGEIENSMKLFEELPDR 402
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ NTI+ ++ L D A++ + M+ ++ T+ + + A + +L G ++
Sbjct: 403 NDVTWNTIIVGYVQLGDGERAMNL-FTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQI 461
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H+ +K + D V NSLI MY+ CG + DAR F+ D V+WN+MI GY +
Sbjct: 462 HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMS 521
Query: 240 GFARELFDFMPERDI----FTWNSMISGYVDVG-------DMEAANGLFDLMPFRDVVSW 288
A LFD M D T+ ++S + G E+ + +D+ P + +
Sbjct: 522 MEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPC--IEHY 579
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
CM+ ++G A + + +V+ W LL V K + R+ + +
Sbjct: 580 TCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKK-VDLGRVCAQHVLEME 638
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
++A+ + + A G D ++ Y+QK +++ + LS
Sbjct: 639 PHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLS 680
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 282/552 (51%), Gaps = 72/552 (13%)
Query: 51 LPIVDLSHP-------ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC-TS 102
+P L H ++ L C+ + Q+H ++ +GLSQ S+ +++++ L
Sbjct: 29 IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVD 88
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ S +L F + P+ F+ +++ + L + +Y +M V +TF
Sbjct: 89 VPMGSYPLLVFGQVNYPNPFLWTAMIRGY-ALQGLLSESTNFYTRMRRDGVGPVSFTFSA 147
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L K CG L++ + G+ + A+ +
Sbjct: 148 LFKA-------------------CGAALNMDL-----------GKQVHAQTI-------- 169
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
+I G+ D++ NSMI YV G + A +FD M
Sbjct: 170 ------LIGGFAS-----------------DLYVGNSMIDLYVKCGFLGCARKVFDEMSE 206
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
RDVVSW +I YAK G++ SA FD + ++++V+W ++ Y + E L F +M
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCG 400
+ +E +L V++ACA +G + WI ++ P +V++ ++L+ MY+KCG
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
D A VF+ M E+NV S++SMI+GY MHG+ AL++F +M K PN TFI +LS
Sbjct: 327 SPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+HAG+V +G F M++ + + P +HY CMVDLLGRAG + ++ +LV +PME
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNG 446
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+WGALL AC H N ++ +I A L +LEP G Y+LLSNIYAS G+W+EV LR+++
Sbjct: 447 GVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVI 506
Query: 581 KEKELEKAVGSS 592
+EK +K G S
Sbjct: 507 REKGFKKNPGCS 518
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 300/576 (52%), Gaps = 58/576 (10%)
Query: 103 LSSVSLSVLFFDG--IQE--------PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF 152
S S+ + FDG IQ+ D ++ NT++ + + + A + +
Sbjct: 133 FQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDM 192
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
V N L G V G ++ E K V+ R+ E ++ NS+I ++ G V +A
Sbjct: 193 VSWNSM---LAGYVLVG--NVEEAKDVYDRMP----ERNVIASNSMIVLFGKKGNVEEAC 243
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT---------------- 256
K+F + DLV+W+++I Y +N A LF M I
Sbjct: 244 KLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLL 303
Query: 257 -----------------------WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
N++I Y ++ A LF D +SWN MI
Sbjct: 304 VVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
GY K G + AR FD M ++ VSW+ +++ Y + + E L LF M KP+E
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETI 423
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
L+SV++AC ++ +D G+WIH+YI+K +K +++L T+L+ MY K G ++ A VF +
Sbjct: 424 LVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE 483
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
EK V +WN++I+G M+G +K+L+ F EM++ G TPN+ TF+ VL AC H G+V EG
Sbjct: 484 EKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHR 543
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+F+ M + +KI P ++HYGCMVDLLGRAG+++++EEL+ +PM + WGALL AC +
Sbjct: 544 HFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKY 603
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
++E G+ + + L+EL P G VLLSNIYAS+G W +V +R +M++ + K G S+
Sbjct: 604 GDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSM 663
Query: 594 VHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+ E + + + + ML E+ ++K+
Sbjct: 664 IEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKL 699
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 277/520 (53%), Gaps = 74/520 (14%)
Query: 41 PKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC 100
P FT LPI++ L+ C +K+F+QI +Q+++SG +DSFAASR+LK
Sbjct: 16 PTFTLKPTLTLPILE------THLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLK-FS 68
Query: 101 TSLSSVSL--SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHY 158
T L +++ S F I+ P+ F+CNT+MK ++ N P A+ + Y+ M+ V ++Y
Sbjct: 69 TELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAI-WVYKFMLESNVAADNY 127
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+P+L + C+ + +GK + ++K GF+ D++++N+LI+MY+VCG + DARKVF+
Sbjct: 128 TYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGS 187
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD 278
V D+V+WNSM+ GYV V A++++D MPER++ NSMI + G++E A LF+
Sbjct: 188 SVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFN 247
Query: 279 LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
M +D+VSW+ +I +C+++ M Y E L L
Sbjct: 248 EMKQKDLVSWSALI-------------SCYEQNEM------------------YEEALIL 276
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA- 397
F M +E ++SVL+AC+ + V+ G+ +H + K I+ V L +L+ MY+
Sbjct: 277 FKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSS 336
Query: 398 ------------------------------KCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
KCG ++ AR +FD+M +K+ VSW++MI GY
Sbjct: 337 CEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGY 396
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+ + L +F EM+ G P++ + V+SACTH + +G W +++ ++
Sbjct: 397 AQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRK-NGLKIN 455
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ ++++ + G + D+ E+ L E G + W AL+
Sbjct: 456 IILGTTLINMYMKLGCVEDALEVFKGLE-EKGVSTWNALI 494
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 239/408 (58%), Gaps = 4/408 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVW--DLVTWNSMIDGYVKNREVGFARELFDF 248
D N+L+ + G+V AR +F P ++ +WN+M+ G ++ VG AR +F
Sbjct: 81 DAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLA 140
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD-VVSWNCMIDGYAKIGNVTSARNC 307
MP R+ +WN+M+S + GDM AA F+ P ++ V W M+ GY G+V A
Sbjct: 141 MPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQF 200
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGV 366
F+ M +R++VSWN ++A YV+ + L +F M+R D +PNE++L SVL C+N+
Sbjct: 201 FEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSA 260
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ G+ +H + K + V TSL++MY KCG +D A +F M ++V++WN+MI G
Sbjct: 261 LGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISG 320
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
Y HG G +A+E+F +M+ +G PN TF+ VL+AC H GM G F+ MQ +Y IE
Sbjct: 321 YAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEA 380
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+V+HY CMVDLL RAG + + L+ +P + P+ +G LL+A + N E + A L
Sbjct: 381 RVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKL 440
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+E P++ G YV L+NIYA +W +V +RR MK+ + K G S V
Sbjct: 441 IEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWV 488
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 143/371 (38%), Gaps = 55/371 (14%)
Query: 259 SMISGYVDVGDMEAA---NGLFDLMPFRDVVS-WNCMIDGYAKIGN--------VTSARN 306
S+ + + GD+ A + P R + +N ++ GYA+ + AR+
Sbjct: 13 SLATAAIRRGDLAGAAEPEAVASTTPQRKTTADYNRLLAGYARAARPGGRRDRLLADARH 72
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
FDR+ + VS+N LL+ + D LF M N S ++L+ + G
Sbjct: 73 LFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAM--PATARNVTSWNTMLSGLSRSGA 130
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIM 425
+ + + + + + ++++ +A G M A F++ +K N V W +M+
Sbjct: 131 VGEARAVFLAMP----ARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVS 186
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY G EKA++ F M P + ++ V++ + W F M R +
Sbjct: 187 GYMDSGHVEKAMQFFEAM----PVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVR 242
Query: 486 PKVEHYGCMV---DLLGRAGLMRDSEELVSKLPME----AGPAL------WGALLSACST 532
P ++ L G R + +KLP+ AG +L G L AC
Sbjct: 243 PNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKL 302
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK----- 587
S E+ RD + + + YA G E L MK + +E
Sbjct: 303 FS-------------EMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITF 349
Query: 588 -AVGSSLVHPG 597
AV ++ +H G
Sbjct: 350 VAVLTACIHTG 360
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 9/208 (4%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V ++ FF+ + N ++ ++ + AL + + V N T +
Sbjct: 194 VEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLL 253
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C+ + +L G++VH K + SL+ MY CG++ A K+F + + D++
Sbjct: 254 GCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIA 313
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMP 281
WN+MI GY + + A ELF+ M + + T+ ++++ + G + F+ M
Sbjct: 314 WNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQ 373
Query: 282 -----FRDVVSWNCMIDGYAKIGNVTSA 304
V ++CM+D + G++ A
Sbjct: 374 EVYGIEARVDHYSCMVDLLCRAGSLERA 401
>gi|354805181|gb|AER41600.1| CRR4 [Oryza glaberrima]
Length = 540
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 280/538 (52%), Gaps = 79/538 (14%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M A+ V +TF L + CA + R H +IV+CGF D+FV+N+L+ +Y CG
Sbjct: 1 MRAQGVPPYGFTFTFLLRACALLGLPRPCGCFHGQIVRCGFGSDVFVQNALMDVYHRCGG 60
Query: 208 VLD-------ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSM 260
AR+VF++ D+V+WNS++ Y+ + + A F+ MPER++ +WN++
Sbjct: 61 GGGGGGGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTV 120
Query: 261 ISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWN 320
++G+ +GDM A +FD MP R+ VSWN MI GYA G+V +AR+ FDRM ++VVSW
Sbjct: 121 VAGFARMGDMVTAWAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWT 180
Query: 321 ILLALYVRCKD-------------------------------YCECLRLFD-RMIRGDAK 348
+++ Y + D Y E LR F M+ G +
Sbjct: 181 AMVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFR 240
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+EA+L+SV++ACA +G ++ WI S+I K I V L +L+ M+AKCG + A+++
Sbjct: 241 PDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSI 300
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F M + +++W +MI G+ +G AL ++ M + G +D FI L+AC H G++
Sbjct: 301 FYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLL 360
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EGW F+ M Y I+P++EHYGCMVDLLGRA
Sbjct: 361 QEGWSIFNEMVERYNIQPRMEHYGCMVDLLGRA--------------------------- 393
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
EL + V++ + ELEP + VL+SN A EG+WD V + R M+ +EK
Sbjct: 394 --------ELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKV 445
Query: 589 VGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD-----VASQISIQ 641
GSS + G E + ++ R+ +Y + + A M+ + VAS +IQ
Sbjct: 446 PGSSSIQVGSEVHEFLAKDTRHKRRKEIYETVDGLMALMRHTEQAHWDLFVASTGAIQ 503
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 271/498 (54%), Gaps = 54/498 (10%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCA----GIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
Y +M+A+ + YTFP L K A G S + VHA +V+ G + V +SL+
Sbjct: 7 YARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVA 66
Query: 201 MYSVCGEVLDARKVFE--DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-------- 250
Y+ G+ AR + D PV WN++I G+ NR F F+
Sbjct: 67 AYTAGGDGAAARALVGECDTPV----AWNALISGH--NRGGRFGESCGSFVDMARAGAAP 120
Query: 251 ---------------ERDIF-------------------TWNSMISGYVDVGDMEAANGL 276
RD+ N+++ Y + DM +A +
Sbjct: 121 TPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKV 180
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
FD M R VVSW ++ G A++G V AR+ FDRM R+ VSW ++ YV + E L
Sbjct: 181 FDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREAL 240
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
+F M + +E +++SV+TACA +G +++G+W+ Y+ + IK D + +L+ MY
Sbjct: 241 EMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 300
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
+KCG ++ A +VF M ++ +W ++I+G ++G E+A+EMF M + TP++ TFI
Sbjct: 301 SKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFI 360
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VL+ACTHAG+V +G +F M Y I P V HYGC++DLLGRAG + ++ + + ++PM
Sbjct: 361 GVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPM 420
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
+WG LL+AC H NSE+G++VA+ L+EL+P + Y+LLSNIYA +W++V L
Sbjct: 421 TPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRL 480
Query: 577 RRIMKEKELEKAVGSSLV 594
R + EK ++K G SL+
Sbjct: 481 RHAIMEKGIKKEPGCSLI 498
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D ++ ++ AL + E M V + +T + CA +
Sbjct: 211 LFDRMPERDTVSWTAMIDGYVWAARFREALEMFRE-MQYSNVSADEFTMVSVITACAQLG 269
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L G+ V + + G ++D FV N+LI MYS CG + A VF+ D TW ++I
Sbjct: 270 ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIIL 329
Query: 232 GYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLF-------DLM 280
G N A E+F M D T+ +++ G ++ F ++
Sbjct: 330 GLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIA 389
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
P +VV + C+ID + G +T A + D+M M N W LLA
Sbjct: 390 P--NVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLA 432
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 254/421 (60%), Gaps = 5/421 (1%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
DL N++I Y+ G + A+++F++ P D V+W +++ GY++N +V A ++F MP
Sbjct: 178 DLVSWNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMP 237
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+RD+ WN+M+SG+V ++ A LF MP RD+VSWN ++ GY + G++ A F +
Sbjct: 238 DRDVLAWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRK 297
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M ++ SWN L++ Y KD L L M +G +P++A+ ++ C+++ + G
Sbjct: 298 MPEKDEASWNTLISGY---KDE-GALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCG 353
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H K + D L+ +SL++MY+KCG++ A VFD + +++ V+WN+MI Y H
Sbjct: 354 RMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYH 413
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G +AL +F M K G +P+ ATF+ VLSAC H G + EG +F MQ+ + + P+ +H
Sbjct: 414 GLAAEALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDH 473
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CMVDLLGR+G + + ++P + W L S+C+ H + +LG++VA+++++
Sbjct: 474 YSCMVDLLGRSGFVHQAYNFTRRIPSDLQINAWETLFSSCNAHGDIQLGELVAKNVLQSR 533
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCP 609
P D G Y LLSNIYA++G W ++R +MKE+ L+K G S + G+ S S +
Sbjct: 534 PSDGGMYTLLSNIYAAKGMWSSAASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAH 593
Query: 610 P 610
P
Sbjct: 594 P 594
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 136/242 (56%), Gaps = 8/242 (3%)
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGY 264
G V AR+VF++ ++ TWN MI G V+N + AR +FD MP R+ +W ++++GY
Sbjct: 6 AGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGY 65
Query: 265 VDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
G + A LFD MP R VVSWN MI GY G V AR+ FD M RN VSW ++++
Sbjct: 66 ARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMIS 125
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
Y++ K E +FDR P + ++L+ A G + + + +Q P
Sbjct: 126 GYMKRKRVREAREIFDRA----PSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQ----TP 177
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
D++ +++T Y + G+M +A+ +FD M EK+ VSW +++ GY +G + A ++F +M
Sbjct: 178 DLVSWNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMP 237
Query: 445 KR 446
R
Sbjct: 238 DR 239
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 138/258 (53%), Gaps = 8/258 (3%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++F N +I G + DAR VF+ P + V+W +++ GY + V ARELFD
Sbjct: 21 ERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGYARCGRVAEARELFDR 80
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MP+R + +WN+MISGY+ G ++ A LFD+MP R+ VSW MI GY K V AR F
Sbjct: 81 MPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISGYMKRKRVREAREIF 140
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
DR N LL+ Y + LF RM P+ S +++T G++
Sbjct: 141 DRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRM----QTPDLVSWNAMITGYTRAGMMQ 196
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+ Q + + + D + T+++ Y + G +D A VF +M +++V++WN+M+ G+
Sbjct: 197 VAQRLFDEMP----EKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDVLAWNTMMSGFV 252
Query: 429 MHGQGEKALEMFMEMEKR 446
+ + + AL +F +M R
Sbjct: 253 VSERLDDALRLFADMPDR 270
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 22/233 (9%)
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
+ G V +AR FD M RNV +WN +++ VR + +FD M N S +
Sbjct: 5 RAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTM----PFRNSVSWAA 60
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPD--VLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+LT A G + + + + PD V+ ++++ Y G++D AR++FD M
Sbjct: 61 LLTGYARCGRVAEARELFDRM------PDRSVVSWNAMISGYLWNGMVDRARDLFDVMPA 114
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
+N VSW MI GY + +A E+F R P+P + +LS G + +
Sbjct: 115 RNDVSWLMMISGYMKRKRVREAREIF----DRAPSPTTSVCNALLSGYAEHGYLKDAEDL 170
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
F MQ P + + M+ RAG+M+ ++ L ++P E W A++
Sbjct: 171 FGRMQ-----TPDLVSWNAMITGYTRAGMMQVAQRLFDEMP-EKDTVSWTAIV 217
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 136/320 (42%), Gaps = 53/320 (16%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
+ +F + E D NT++ + GAL+ E + + T+ + +C+
Sbjct: 291 ATAWFRKMPEKDEASWNTLISGY----KDEGALNLLSEMTQGGY-RPDQATWSVAISICS 345
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ +L G+ VH +K GFE D V +SLI MYS CG + +A +VF+ D VTWN+
Sbjct: 346 SLAALGCGRMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNA 405
Query: 229 MIDGYVKNREVGFARELFDFMPER----DIFTWNSMIS-----GYVDVG--DMEAANGLF 277
MI Y + A LFD M + D T+ S++S GY+ G + +
Sbjct: 406 MIATYAYHGLAAEALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDW 465
Query: 278 DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
+L+P D ++CM+D + G V A N
Sbjct: 466 NLIPRSD--HYSCMVDLLGRSGFVHQAYN------------------------------- 492
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
F R I D + N + ++ ++C G I +G+ + + + R D + T L +YA
Sbjct: 493 -FTRRIPSDLQIN--AWETLFSSCNAHGDIQLGELVAKNVLQSR-PSDGGMYTLLSNIYA 548
Query: 398 KCGVMDLARNVFDNMTEKNV 417
G+ A +V M E+ +
Sbjct: 549 AKGMWSSAASVRGLMKEQGL 568
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
+ G + AR VFD M+E+NV +WN MI G +G A +F M P N ++
Sbjct: 5 RAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTM----PFRNSVSWAA 60
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME 517
+L+ G V E FD M + V + M+ G++ + +L +P
Sbjct: 61 LLTGYARCGRVAEARELFDRMP-----DRSVVSWNAMISGYLWNGMVDRARDLFDVMPAR 115
Query: 518 AGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI----YASEGKWDEV 573
W ++S + + + E+ R P P + N YA G +
Sbjct: 116 -NDVSWLMMISG-------YMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDA 167
Query: 574 ENLRRIMKEKEL 585
E+L M+ +L
Sbjct: 168 EDLFGRMQTPDL 179
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 305/608 (50%), Gaps = 77/608 (12%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +CS+ + ++H +++ +GL+ ++ + L + SV + FD + D
Sbjct: 152 LSACSSPAALNWGREVHVRVMEAGLANNATVGN-ALISMYAKCGSVRDARRVFDAMASRD 210
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
T+ ++ +L Y+ M+ + V + T+ + C + +L +GK++H
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYH-AMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A+IV+ D+ V +L MY CG V DAR
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAR---------------------------- 301
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------PFR----------- 283
E+F+ +P RD+ WN+MI G VD G +E A+G+F M P R
Sbjct: 302 ---EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACA 358
Query: 284 ----------------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
DV N +I+ Y+K G++ AR FDRM R+VVSW
Sbjct: 359 RPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTA 418
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
L+ Y C E F +M++ + N+ + M VL AC+N + G+ IH+ + K
Sbjct: 419 LVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAG 478
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
I D+ ++ +L++MY KCG ++ A V + M+ ++VV+WN++I G +G+G +AL+ F
Sbjct: 479 IFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFE 538
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
M+ PN TF+ V+SAC +V EG F M++ Y I P +HY CMVD+L RA
Sbjct: 539 VMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARA 598
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
G + ++E+++ +P + A+WGALL+AC H N E+G+ A+ ++LEP++ G YV LS
Sbjct: 599 GHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLS 658
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSML 620
IYA+ G W +V LR++MKE+ ++K G S + GE S + P R +YS L
Sbjct: 659 FIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHP-RTEEIYSEL 717
Query: 621 GEIGAQMK 628
+ Q+K
Sbjct: 718 EALTKQIK 725
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 127/245 (51%), Gaps = 15/245 (6%)
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
F + P +V N ++ Y G+V AR FD+ ++VVSWN++++ Y E
Sbjct: 73 FGMKP--NVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAF 130
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF M + +P++ + +S+L+AC++ ++ G+ +H + + + + + +L++MY
Sbjct: 131 NLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMY 190
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
AKCG + AR VFD M ++ VSW ++ Y G +++L+ + M + G P+ T++
Sbjct: 191 AKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYM 250
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG------CMVDLLGRAGLMRDSEEL 510
VLSAC + +G ++I+ + EH+ + + + G ++D+ E+
Sbjct: 251 NVLSACGSLAALEKG-------KQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 511 VSKLP 515
LP
Sbjct: 304 FECLP 308
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 68/109 (62%)
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+ +L +C + +G+ +H +I + +KP+V + +LL +Y CG ++ AR +FD +
Sbjct: 48 VKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSN 107
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
K+VVSWN MI GY G G++A +F M++ G P+ TF+ +LSAC+
Sbjct: 108 KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS 156
>gi|224066751|ref|XP_002302197.1| predicted protein [Populus trichocarpa]
gi|222843923|gb|EEE81470.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/431 (38%), Positives = 245/431 (56%), Gaps = 42/431 (9%)
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD------- 253
MY+ CG++ D+RK+FE P ++VTWN+MI GY KN ++ A LFD M R+
Sbjct: 1 MYAKCGDIPDSRKLFEYMPERNVVTWNAMISGYGKNGDMKSASVLFDKMSTRNAVSWIEM 60
Query: 254 --------------------------IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
+ TW MI GY G+MEAA LF+ MP R+
Sbjct: 61 IDGFARSGDMVAARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAARLLFEDMPQRNFFV 120
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC-ECLRLFDRMIRGD 346
W+ MI GY KIGNV AR FDR+ +RN+V+WN L+ Y + +C E L F +M
Sbjct: 121 WSSMISGYCKIGNVKEARAIFDRVPVRNLVNWNSLICGYSQ-NGFCEEALDAFGKMQNEG 179
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
+P+E +++ VL+ACA + ++D+G+ +H I +K + + +L+ MYAKCG + AR
Sbjct: 180 YEPDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTGAR 239
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+F+ MT KN WNSMI G+ +HG+ ++ALE F ME+ P++ TF+ VLSAC H G
Sbjct: 240 LIFERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSVLSACVHGG 299
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
V G F M+R Y + ++HYGC+VDLLGRAG ++D+ L+ +PM+ +WGA
Sbjct: 300 FVEVGLEIFSKMER-YGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSMPMKPNDTVWGAF 358
Query: 527 LSACSTHSNSELGKIVAQHLMELEP-----RDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
L AC H ++++ + V + + + DP Y LL NIYA G W++ + +M
Sbjct: 359 LGACRIHMDNDMVEQVVEDVCTSDSSVDSGNDP-HYALLLNIYAGSGSWEKAGRVSMVMA 417
Query: 582 EKELEKAVGSS 592
++ L+K G S
Sbjct: 418 DRGLQKTSGRS 428
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ KM + E + T + CA + L GK VH I G +L+ FV N+L+ MY+
Sbjct: 172 FGKMQNEGYEPDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVDMYAK 231
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSM 260
CG++ AR +FE + WNSMI G+ + + A E F M E D T+ S+
Sbjct: 232 CGDLTGARLIFERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEITFLSV 291
Query: 261 ISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-N 315
+S V G +E +F M + + C++D + G + A + M M+ N
Sbjct: 292 LSACVHGGFVEVGLEIFSKMERYGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSMPMKPN 351
Query: 316 VVSWNILLA 324
W L
Sbjct: 352 DTVWGAFLG 360
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 295/586 (50%), Gaps = 52/586 (8%)
Query: 93 SRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF 152
++ L L + S+ + FD + P A +C + LS + E + A
Sbjct: 15 TQPLHALLSDASTYRAARHLFDAVPRPTAALCCAFVSVL-------SKLSLHQELIEAVS 67
Query: 153 VEHNHY------TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
H PL+ K CA + +G + H + G D+FV+ +L+ Y+ G
Sbjct: 68 SLHRRGGAIPSGCIPLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNG 127
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD 266
+ A FE+ P+ D + N +I GY ++ +V AR LFD MP + +WNSMI+ Y
Sbjct: 128 NMDSAVMAFEEMPIKDPIPMNCLITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAH 187
Query: 267 VGDMEAANGLFDLM--------------------------------------PFRDVVSW 288
G+ + A LFD M ++V+
Sbjct: 188 GGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVH 247
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+++ Y K + AR FDRM R+VV+W+ ++A Y E L LF+RM + K
Sbjct: 248 TALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCK 307
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PNE +L+ VL+ACA +G ++G+ I SYI+ + L ++L+ MY KCG + AR+V
Sbjct: 308 PNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDV 367
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F M +K V++WNSMI G ++G E A+ ++ EM G PN+ TF+ +L+ACTHAG+V
Sbjct: 368 FHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLV 427
Query: 469 LEGWWYFDLMQRIYK-IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+G +F M++ + P+VEH C+VDLL ++G + ++ + + + +E +W LL
Sbjct: 428 DKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLL 487
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SAC H++ EL K+ A L+ LEP YVLLSNIYA G W +V +R +M+ K L+K
Sbjct: 488 SACRAHADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQK 547
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD 633
S + +V++ R +Y+++ +G Q++ D
Sbjct: 548 LSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLERTSPD 593
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 243/392 (61%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I V +A ++FE+ P +++++ +M+DGY K E+ AR LF+ MP++++
Sbjct: 144 NAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVV 203
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W MISGYV+ G + A LF+ MP +++V+ MI GY K G A+ FD++ R+
Sbjct: 204 SWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 263
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+ SWN ++ Y + E L+L +M++ +P+ ++L+SVLTAC+++ + G+ H
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHV 323
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ K + + + +L+TMY KCG + + F + +VVSWN+MI + HG ++
Sbjct: 324 LVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDR 383
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL F EM P+ TF+ +LSAC HAG V E +F+ M YKI P+ EH+ C+V
Sbjct: 384 ALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLV 443
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L R G + + +++ ++P EA +WGALL+AC H N +LG++ A+ ++ELEP++ G
Sbjct: 444 DILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSG 503
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
YV+LSNIYA+ G W EV +R +M+E+ ++K
Sbjct: 504 AYVVLSNIYAAAGMWGEVTRVRGLMREQGVKK 535
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FD I D N ++ + AL + +M+ ++ +H T + C+ +
Sbjct: 254 ILFDQIPCRDLASWNAMITGYAQNGSGEEALKLH-SQMLKMGMQPDHSTLISVLTACSSL 312
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SL+EG+K H ++K G+E + + N+LI MY CG +LD+ F D+V+WN+MI
Sbjct: 313 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 372
Query: 231 DGYVK----NREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-EAANGLFDLMPFRDV 285
+ + +R + E+ E D T+ S++S G + E+ N ++ +
Sbjct: 373 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKI 432
Query: 286 V----SWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + C++D ++ G V A M + W LLA
Sbjct: 433 VPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLA 476
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 261/462 (56%), Gaps = 14/462 (3%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y +M+A N +TFP K CA + G ++H ++K G E + FV+ SLI MY
Sbjct: 44 YCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCK 103
Query: 205 CGEVLDARKVF-EDGPVWDL-VTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMIS 262
C + ARKVF E+ +L V +N++I GY N A LF M + + +
Sbjct: 104 CSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTML 163
Query: 263 GYVDV----------GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
G + V + A + F L D+ NC++ Y + G+V AR FD M
Sbjct: 164 GLIPVCAGPIHLGFGTSLHACSVRFGLDG--DLSVGNCLLTMYVRCGSVDFARKLFDGMP 221
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQW 372
+ +++WN +++ Y + L L+ +M P+ +L+ VL++CA++G G+
Sbjct: 222 EKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGRE 281
Query: 373 IHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
+ I+ + L +L+ MYA+CG + AR +FD MTEKNV+SW ++I GYGMHGQ
Sbjct: 282 VEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQ 341
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
GE A+++F EM P+ A F+ VLSAC+HAG+ +G +YF M+R Y ++P EHY
Sbjct: 342 GELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYS 401
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
C+VDLLGRAG + ++ +L+ + +E A+WGALL AC H N EL ++ + ++E EP
Sbjct: 402 CVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPT 461
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ G YVLLSNI++ G + + +R +M+E++L+K G S V
Sbjct: 462 NIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYV 503
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 26/430 (6%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H ++ +G + F + ++ C + S +F + + +C + + L
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSL 136
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N F + +M + V N T L VCAG L G +HA V+ G + DL V
Sbjct: 137 NSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSV 196
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI 254
N L+ MY CG V ARK+F+ P L+TWN+MI GY +N G +L+ M I
Sbjct: 197 GNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGI 256
Query: 255 ----FTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVT 302
T ++S +G A + F PF N +I+ YA+ GN+
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK----NALINMYARCGNLV 312
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR FD M +NV+SW ++A Y ++LFD MI D P+ A+ +SVL+AC+
Sbjct: 313 KARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACS 372
Query: 363 NMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSW 420
+ G+ + G + + +++ ++P + ++ + + G ++ AR + +M+ E + W
Sbjct: 373 HAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVW 432
Query: 421 NSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
+++ +H E A E +E E P + + +LS +EG +
Sbjct: 433 GALLGACKIHRNVELAELAFEKVIEFE-----PTNIGYYVLLSNIFSEAGNMEGILRVRV 487
Query: 478 MQRIYKIEPK 487
M R K++ +
Sbjct: 488 MMRERKLKKE 497
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
SWN L R + + E L L+ +M+ PN + +CA++ + G +H
Sbjct: 20 TTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD-NMTEKNV-VSWNSMIMGYGMHGQ 432
++ K +P+ + TSL++MY KC + AR VFD N +N+ V +N++I GY ++ +
Sbjct: 80 GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY-FDLMQRIYKIEPKVEHY 491
A+ +F +M K G + N T + ++ C AG + G+ + ++ +
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVC--AGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 492 GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
C++ + R G + + +L +P E G W A++S + + +A H+++L
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMISGYAQNG-------LAGHVLDL 247
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 287/546 (52%), Gaps = 16/546 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ + +++E +H L SG D F ++ + + +V ++ F I+ P
Sbjct: 57 VLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVD-MYSKCGTVYDALKVFTKIRNP 115
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D + ++ A ++ M K N +T L + LR G+ +
Sbjct: 116 DVVAWSAMITGLDQQGHGQEAAELFH-LMRRKGARPNQFTLSSLVSTATNMGDLRYGQSI 174
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H I K GFE D V N LI MY V D KVFE DLV+WN+++ G+ ++
Sbjct: 175 HGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTC 234
Query: 240 GFARELF------DFMPERDIFTWNSMI---SGYVD--VGDMEAANGLFDLMPFRDVVSW 288
G +F F P ++FT+ S++ S +D G A+ + + D V
Sbjct: 235 GRGPRIFYQMLLEGFKP--NMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG- 291
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
++D YAK + A FDR+ R++ SW ++++ Y + + ++ F +M R K
Sbjct: 292 TALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIK 351
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PNE +L S L+ C++M ++ G+ +H+ K D+ + ++L+ +Y KCG M+ A +
Sbjct: 352 PNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F + +++VSWN++I GY HGQGEKALE F M G P++ATFI VLSAC+ G+V
Sbjct: 412 FKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLV 471
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG FD M +IY I P +EHY CMVD+LGRAG + + + ++ + +W +L
Sbjct: 472 EEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLG 531
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC H N + G+ A+ L E+EP Y+LLSNI+AS+G+WD+V N+R +M + ++K
Sbjct: 532 ACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKE 591
Query: 589 VGSSLV 594
G S V
Sbjct: 592 PGCSWV 597
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 217/441 (49%), Gaps = 24/441 (5%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
LFF G+ E + N ++ + L D L + KM + + +T + K CA
Sbjct: 7 LFF-GMPEKNGVSWNALLNGYAQLGDGKKVLKLFC-KMKECETKFSKFTLSTVLKGCANT 64
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SLREGK +HA ++ G E+D F+ SL+ MYS CG V DA KVF D+V W++MI
Sbjct: 65 GSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMI 124
Query: 231 DGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDM---EAANGLFDLMPFR 283
G + A ELF M + + FT +S++S ++GD+ ++ +G F
Sbjct: 125 TGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFE 184
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
D + N +I Y K V F+ M ++VSWN LL+ + + R+F +M
Sbjct: 185 SDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQM 244
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ KPN + +SVL +C+++ + G+ +H++I K D + T+L+ MYAK +
Sbjct: 245 LLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCL 304
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ A FD + +++ SW +I GY Q EKA++ F +M++ G PN+ T LS C
Sbjct: 305 EDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGC 364
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYG------CMVDLLGRAGLMRDSEELVSKLPM 516
+H + G ++++ + K H+G +VDL G+ G M +E + L +
Sbjct: 365 SHMATLENG-------RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-I 416
Query: 517 EAGPALWGALLSACSTHSNSE 537
W ++S S H E
Sbjct: 417 SRDIVSWNTIISGYSQHGQGE 437
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F M +N VSWN LL Y + D + L+LF +M + K ++ +L +VL CAN
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
G + G+ +H+ + + D L SL+ MY+KCG + A VF + +VV+W++M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
I G G G++A E+F M ++G PN T ++S T+ G
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG 166
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 279/505 (55%), Gaps = 46/505 (9%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLI-HMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
+S R+ K+VHAR++ G L N L+ + S+ + A VF+ P DL +N++
Sbjct: 12 KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTI 71
Query: 230 I-----------DGYVKNREVGFAREL--------FDFMP-------------------- 250
I D + K R + L F F
Sbjct: 72 IKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKL 131
Query: 251 --ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
E ++F N++I YV++ + A +FD P RD+ SWN M+ GYA++G + AR F
Sbjct: 132 GLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLF 191
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D M ++VVSW +++ ++ + E L +F M+ PNE +L S L ACAN+ +D
Sbjct: 192 DEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALD 251
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIMG 426
G+W+H YI+K I+ + L L+ MYAKCG ++ A +F++ ++ V WN+MI G
Sbjct: 252 QGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGG 311
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
+ +HG+ ++A+E+F +M+ +PN TF+ +L+AC+H V EG +YF+ M Y+++P
Sbjct: 312 FAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKP 371
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
++EHYGC+VDLLGRAG ++++EE++S + + A+WGALLSAC H ++E+G+ V + +
Sbjct: 372 ELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIV 431
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGEFASESIV 605
EL+P G +VLL+NIY+ G W+E LR + E +K G SS+ G F +
Sbjct: 432 KELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVG 491
Query: 606 ENCPPHRKCIVYSMLGEIGAQMKMC 630
+ P K + Y L E+ ++K+
Sbjct: 492 DRSHPQTKQL-YLFLDEMITKLKIA 515
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 194/416 (46%), Gaps = 46/416 (11%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L SC + ++ Q+H +L+ +GL +++LK+L + + +S + + FD +PD F+
Sbjct: 8 LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFL 67
Query: 124 CNTIMKSFLMLNDPFGALSF--YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
NTI+K L + A SF + + + + N Y+F K C + EG++V
Sbjct: 68 YNTIIK-VLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRV 126
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+K G E +LFV N+LI MY V+DARKVF+ P D+ +WN M+ GY + ++
Sbjct: 127 HAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDE 186
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR------------------ 283
AR+LFD MPE+D+ +W +MISG + VG A +F M +
Sbjct: 187 ARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACAN 246
Query: 284 ----DVVSW-----------------NCMIDGYAKIGNVTSARNCFDR--MCMRNVVSWN 320
D W +ID YAK G + A F+ R V WN
Sbjct: 247 LVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWN 306
Query: 321 ILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ-WIHSYIQK 379
++ + E + +F++M PN+ + +++L AC++ ++ G+ + S
Sbjct: 307 AMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASH 366
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGE 434
R+KP++ L+ + + G + A + +M +V W +++ +H E
Sbjct: 367 YRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAE 422
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 285/531 (53%), Gaps = 16/531 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ + + P A+ F+ + +++ F E + +T + CA + +
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF-ESDKFTLSSVFSACAELEN 284
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L G+++H+ ++ G D V SL+ MY+ C G V D RKVF+ +++W ++
Sbjct: 285 LSLGRQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTAL 342
Query: 230 IDGYVKNREVGF-ARELFDFM-----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
I GY++N + A LF M E + FT++S +V D + R
Sbjct: 343 ITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKR 402
Query: 284 DVVSWNCMIDG----YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ S + + + + K + AR F+ + +N+VS+N L R D+ L
Sbjct: 403 GLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELL 462
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+ + + + S+L+ AN+G + G+ IHS + K + + + +L++MY+KC
Sbjct: 463 SEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKC 522
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +D A VF M +NV+SW SMI G+ HG E+ LE F +M K G PN+ T++ +L
Sbjct: 523 GSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAIL 582
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC+H G+V EGW +F+ M +KI+PK+EHY CMVDLL RAGL+ D+ E ++ +P +A
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+W L AC HSN+ELGK+ A+ ++E +P +P Y+ LSNIYAS GKW+E +RR
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRK 702
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC 630
MKE+ L K G S + G+ + V + +Y L + ++K C
Sbjct: 703 MKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRC 753
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 201/434 (46%), Gaps = 24/434 (5%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM- 133
Q+H+ + SGL+ D + + C++ SV FD +Q+ ++ ++
Sbjct: 290 QLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQN 349
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
N A++ + E + VE NH+TF K C + R GK+V K G +
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSS 409
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V NS+I M+ C + DAR FE +LV++N+ +DG +N + A EL + ER+
Sbjct: 410 VSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERE 469
Query: 254 I----FTWNSMISGYVDVGDMEAA----NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
+ FT+ S++SG +VG + + + L + N +I Y+K G++ +A
Sbjct: 470 LGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
F M RNV+SW ++ + + L F++M + KPNE + +++L+AC+++G
Sbjct: 530 RVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVG 589
Query: 366 VIDIGQWIH--SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNS 422
++ G W H S + +IKP + ++ + + G++ A + M + +V+ W +
Sbjct: 590 LVSEG-WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 423 MIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
+ +H G+ A +E + P A +I + + AG W M+
Sbjct: 649 FLGACRVHSNTELGKLAARKILEFDPNEP----AAYIQLSNIYASAGK----WEESTEMR 700
Query: 480 RIYKIEPKVEHYGC 493
R K V+ GC
Sbjct: 701 RKMKERNLVKEGGC 714
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 163/323 (50%), Gaps = 22/323 (6%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF L K C R R GK VHAR+++ E D + NSLI +YS G++ A+ VFE
Sbjct: 64 TFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETM 123
Query: 219 PVW---DLVTWNSMIDGYVKN-REVGFARELFDFMPERDI---FTWNSMI-----SGYVD 266
+ D+V+W++M+ + N RE + +F+ + + + ++I S +V
Sbjct: 124 GRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVG 183
Query: 267 VGDMEAANGLFDLMPFRDVVSWNC-MIDGYAKIGN-VTSARNCFDRMCMRNVVSWNILLA 324
VG + L F V C +ID + K N +A FD+M NVV+W +++
Sbjct: 184 VGRV-ILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
++ E +R F M+ + ++ +L SV +ACA + + +G+ +HS+ + +
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLAD 302
Query: 385 DVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKALEMF 440
DV SL+ MYAKC G +D R VFD M + +V+SW ++I GY + +A+ +F
Sbjct: 303 DV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLF 360
Query: 441 MEMEKRGPT-PNDATFICVLSAC 462
EM +G PN TF AC
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKAC 383
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP-NEASLMSVL 358
++++ N DR+ +R ++ D + D M R +P + + S+L
Sbjct: 21 SISNRINVADRLILR-----------HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLL 69
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT---EK 415
+C +G+ +H+ + + I+PD +L SL+++Y+K G + A++VF+ M ++
Sbjct: 70 KSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKR 129
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VVSW++M+ +G +G+ A+++F+E + G PND + V+ AC+++ V G
Sbjct: 130 DVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVIL 189
Query: 476 DLMQRIYKIEPKV 488
+ + E V
Sbjct: 190 GFLMKTGHFESDV 202
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 293/547 (53%), Gaps = 30/547 (5%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
L V + FD E + + NT++ ++ N P A+ + + M ++ + TF
Sbjct: 268 LGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLS 327
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ ++ L G+++HA I+K L + + N++I MYS CG + + KVF + D
Sbjct: 328 ALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERD 387
Query: 223 LVTWNSMIDGYVKNREVGFARE----LFDFMPER---DIFTWNSMISGYVDVGDMEAANG 275
+VTWN+M+ +V+N G E +F+ + D T +++S ++ E
Sbjct: 388 VVTWNTMVSAFVQN---GLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQ 444
Query: 276 LFDLMPFRDVVSWNCM----IDGYAKIGNVTSARNCFDRMCM--RNVVSWNILLALYVRC 329
+ R + + M ID YAK G +T+A+ F++ R+ +WN ++A Y +
Sbjct: 445 AHAYL-IRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQN 503
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
E +F +MI + +PN +L S+L AC MG I +G+ IH + +C + +V +
Sbjct: 504 GLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVG 563
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
T+LL MY+K G + A NVF EKN V++ +MI+ YG HG GE+AL +F M G
Sbjct: 564 TALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIK 623
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
P+ TF+ +LSAC++AG+V EG F M+R YKI+P EHY C+ D+LGR G + ++ E
Sbjct: 624 PDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYE 683
Query: 510 LVSKLPMEAGP-ALWGALLSACSTHSNSELGKIVAQHLMELEPRD--PGPYVLLSNIYAS 566
V L E +WG+LL AC H ELGK+VA L+E+E G +VLLSNIYA+
Sbjct: 684 FVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAA 743
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLV----HPGEFASESIVENCPPHRKCI-VYSMLG 621
EG WD V+ +R+ M++K L K G S V H F S H +C +Y ML
Sbjct: 744 EGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRD-----HKHPQCAEIYQMLE 798
Query: 622 EIGAQMK 628
++ +MK
Sbjct: 799 KLAMEMK 805
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 229/486 (47%), Gaps = 50/486 (10%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I P + NTI+ F+ N P AL FY + + + YTF K CA R
Sbjct: 59 LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVC-------GEVLD------ARKVFEDG 218
SL+ GK +H +++ F V NSL++MYS C G D R+VF+
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAAN 274
++V WN+MI YVK + A ++F M I ++ ++ + D + AN
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNAN 238
Query: 275 GLFDLMP------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
L+ L+ D + I YA++G V AR FD RN WN ++ YV+
Sbjct: 239 VLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQ 298
Query: 329 CKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
E + LF +++ + ++ + +S LTA + + +D+G+ +H+YI K V+
Sbjct: 299 NNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVV 358
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+ +++ MY++CG + + VF NM E++VV+WN+M+ + +G ++ L + EM+K+G
Sbjct: 359 ILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQG 418
Query: 448 PTPNDATFICVLSACT-----------HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+ T +LS + HA ++ G F+ M G ++D
Sbjct: 419 FMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMD------------GYLID 465
Query: 497 LLGRAGLMRDSEELVSKLPM-EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
+ ++GL+ +++L K + A W A+++ + + SE G V + ++E R P
Sbjct: 466 MYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVR-PN 524
Query: 556 PYVLLS 561
L S
Sbjct: 525 AVTLAS 530
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Query: 194 VRNSLIHMYSVC--GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE-----VGFARELF 246
+R+ L H+ C G A +F+ P V WN++I G++ N + +AR
Sbjct: 40 IRSRLSHL---CRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRA 96
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV----VSWNCMIDGYAK----- 297
P+ D +T++S + ++ L + + +N +++ Y+
Sbjct: 97 SPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEV 156
Query: 298 --IGNVTSARNC------FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
+G NC FD M RNVV+WN +++ YV+ + E ++F M+R +P
Sbjct: 157 PYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRP 216
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQK--CRIKPDVLLSTSLLTMYAKCGVMDLARN 407
S ++V A M D ++ + K D + +S + MYA+ G +D AR
Sbjct: 217 TPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFARE 276
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME-MEKRGPTPNDATFICVLSACTH 464
+FD E+N WN+MI GY + +A+++F++ ME +D TF+ L+A +
Sbjct: 277 IFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQ 334
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 316/615 (51%), Gaps = 67/615 (10%)
Query: 33 KLWANEPKPKFTDTDNQRLPI--VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSF 90
+L+ E K T D P+ + L+H L LE+C++ +F Q+ Q++ L D+F
Sbjct: 12 RLFGTECGSKTTKWD----PVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTF 67
Query: 91 AASR-VLKKLCTSLSSVSLS-VLFFDGIQEPDAFMCNTIMKSFLM-LNDPFGALSFYYEK 147
SR + T ++ L+ +LF + P+ F+ NT++ + N+ FG Y
Sbjct: 68 PMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG----LYSS 123
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLFVRNSLIHMYSVCG 206
M+ V + TF L K + L E K++H I+ G L ++ NSL+ Y G
Sbjct: 124 MIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELG 180
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE---------------------- 244
A KVF P D+ ++N MI GY K GF+ E
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQ---GFSLEALKLYFKMVSDGIEPDEYTVLS 237
Query: 245 -------LFDFMPERDIFTW---------------NSMISGYVDVGDMEAANGLFDLMPF 282
L D + + W N+++ Y + A FD M
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR--CKDYCECLRLFD 340
+D+ SWN M+ G+ ++G++ +A+ FD+M R++VSWN LL Y + C ++
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
I KP+ +++S+++ AN G + G+W+H + + ++K D LS++L+ MY KCG
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+++ A VF TEK+V W SMI G HG G++AL++F M++ G TPN+ T + VL+
Sbjct: 418 IIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS-KLPMEAG 519
AC+H+G+V EG F+ M+ + +P+ EHYG +VDLL RAG + +++++V K+PM
Sbjct: 478 ACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPS 537
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
++WG++LSAC + E ++ L++LEP G YVLLSNIYA+ G+W + R
Sbjct: 538 QSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREA 597
Query: 580 MKEKELEKAVGSSLV 594
M+ + ++K G S V
Sbjct: 598 MENRGVKKTAGYSSV 612
>gi|21952815|dbj|BAC06231.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572862|gb|EAZ14377.1| hypothetical protein OsJ_04297 [Oryza sativa Japonica Group]
gi|215697551|dbj|BAG91545.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 548
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 263/503 (52%), Gaps = 43/503 (8%)
Query: 134 LNDPFGALSFYYEKMM--AKFVEHNHYTFPL---LGKVCAGIRSLREGKKVHARIVKCGF 188
L + + SF E + +K + H + PL L K A G+ +HA VK
Sbjct: 27 LAKVYASNSFLREAAIIYSKLLPHRTHHLPLVIVLLKATASRADPVLGRALHAEAVKSAN 86
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFED----------------GPVWDLV-------- 224
D V +L+ +Y CG + DAR+VF+ D+V
Sbjct: 87 AHDRLVGTTLVSVYCKCGLLADARRVFDGMLDRNAVTCNAMLAGYAAAGDMVSAEALFAG 146
Query: 225 -------TWNSMIDGYVKNREVGFARELFDFMP--ERDIFTWNSMISGYVDVGDMEAANG 275
TW ++I G+ ++ R F+ MP +++ TW + YV GDME A
Sbjct: 147 MGSRTPVTWATLIRGFAGKGDMAETRRWFEAMPLGMQNVVTWTVAVQAYVAAGDMETARE 206
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
LF+ MP R+ W+ M+ G K GN A+ FD++ +RN+V+WN L+A Y + +
Sbjct: 207 LFNKMPARNAFVWSSMVTGNFKAGNADEAQAVFDKIPVRNLVNWNALIAGYAKMGCCEKA 266
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L F M++ KP+E ++ VL+ACA +G ++ + +H++I + RI+ + + L+ M
Sbjct: 267 LEAFHSMLKDKIKPDEFTMAGVLSACAQLGSLEQARKVHNFIIQHRIRKNQFVMNGLVDM 326
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
+AKCG + ARN+FDNM +N WNSMI HGQ +A+ +F +ME PN+ T
Sbjct: 327 FAKCGDLAFARNIFDNMQWRNTECWNSMISALSSHGQSIEAIRLFSKMECSEQKPNEITL 386
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL ACTH G V EG F IY + VEHYGC+VDLLGR+G +R++ E+V +
Sbjct: 387 LAVLGACTHGGFVDEGLRIFSKFD-IYGVAAAVEHYGCLVDLLGRSGRLREAYEIVKNML 445
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR----DPGPYVLLSNIYASEGKWD 571
+E +WG+LL AC H ++E+ ++V+ + +L R + Y+LLSNI AS +W+
Sbjct: 446 VEPNEVIWGSLLGACRVHGDAEMSELVSSEIHQLHSRRVSTNDAEYILLSNIMASSERWE 505
Query: 572 EVENLRRIMKEKELEKAVGSSLV 594
+ E +RR M + K G S V
Sbjct: 506 QAERMRRKMALHGVGKTPGCSSV 528
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 217/349 (62%)
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
MP + +VS MI YAK G + AR FD + R+ + WN+++ Y + E L LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+M+ +PNE ++++VL+AC G ++ G+W+HSYI+ I +V + TSL+ MY+KC
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G ++ AR VF+ ++ K+VV+WNSM++GY MHG + AL +F EM G P D TFI VL
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
+AC+HAG+V EGW +F M+ Y IEPKVEHYGCMV+LLGRAG + ++ ELV + ++
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
P LWG LL AC H N LG+ +A++L+ + G YVLLSNIYA+ G W+ V +R +
Sbjct: 241 PVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTL 300
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
MKE EK G S + E + + + +Y ML EI +K
Sbjct: 301 MKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLK 349
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 17/291 (5%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK----NREVGFARE 244
E L ++I Y+ G + +AR +F+ D + WN MIDGY + N + R+
Sbjct: 3 EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62
Query: 245 LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGN 300
+ + + T +++S G +E + + +V +ID Y+K G+
Sbjct: 63 MLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGS 122
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ AR F+R+ ++VV+WN ++ Y + LRLF M +P + + + VL A
Sbjct: 123 LEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNA 182
Query: 361 CANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVV 418
C++ G++ G ++ +S + I+P V ++ + + G ++ A + NM +++ V
Sbjct: 183 CSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPV 242
Query: 419 SWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
W +++ +HG GE+ E + N T++ + + AG
Sbjct: 243 LWGTLLGACRLHGNIALGEQIAEYLVSQN----LANSGTYVLLSNIYAAAG 289
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FDG++E DA N ++ + P L + + + AK V N T + C
Sbjct: 27 VLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAK-VRPNEVTVLAVLSACGQT 85
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+L G+ VH+ I G +++ V SLI MYS CG + DAR VFE D+V WNSM+
Sbjct: 86 GALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMV 145
Query: 231 DGYVKNREVGFARELFDFMPE 251
GY + GF+++ E
Sbjct: 146 VGYAMH---GFSQDALRLFKE 163
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 291/535 (54%), Gaps = 15/535 (2%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
++E ++H L+++G D L ++ S+ + F+G++ D F ++I+
Sbjct: 45 ALEEGRRLHEHLIITGFRTD-IPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSII 103
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
++ A+ Y +M+A+ VE N TF CA + L +G+ +H RI+
Sbjct: 104 AAYARAGRGEMAVVLY-RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKV 162
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
D +++SL++MY C E+++ARKVFE ++ ++ +MI YV+ E A ELF
Sbjct: 163 PQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSR 222
Query: 249 MP-----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIG 299
M E + +T+ +++ +G++E + + R +VV N ++ Y K G
Sbjct: 223 MSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCG 282
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR FD M RNV+SW ++A Y + + E L LF RM D +P+ S S L
Sbjct: 283 SPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALN 339
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G +D G+ IH + + + + TSLL+MYA+CG +D AR VF+ M ++ S
Sbjct: 340 ACALLGALDEGREIHHRVVEANLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDAFS 398
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
N+MI + HG+ ++AL ++ +ME+ G + TF+ VL AC+H +V + + +
Sbjct: 399 CNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLV 458
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ + P VEHY CMVD+LGR+G + D+EELV +P +A W LLS C H + + G
Sbjct: 459 MDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRG 518
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ + EL P + PYV LSN+YA+ ++D+ +R+ M+E+ + + V S +
Sbjct: 519 ERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYI 573
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 196/388 (50%), Gaps = 17/388 (4%)
Query: 137 PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRN 196
P AL + E M + + + + L C +++L EG+++H ++ GF D+ +
Sbjct: 11 PLQALELWGE-MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLET 69
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----PER 252
+L+ MY+ CG + DA++VFE + DL W+S+I Y + A L+ M E
Sbjct: 70 ALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEP 129
Query: 253 DIFTWNSMISGYVDVGDMEAANG-----LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
++ T+ + G V + L +P DV+ + +++ Y K + AR
Sbjct: 130 NVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQ-DSLLNMYLKCDEMVEARKV 188
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGV 366
F+ M RNV S+ +++ YV+ ++ E L LF RM + +A +PN + ++L A +G
Sbjct: 189 FEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGN 248
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
++ G+ +H ++ +V++ +L+TMY KCG AR VFD+MT +NV+SW SMI
Sbjct: 249 LEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAA 308
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
Y HG ++AL +F M+ P+ +F L+AC G + EG + P
Sbjct: 309 YAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASP 365
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKL 514
++E ++ + R G + D+ + +++
Sbjct: 366 QME--TSLLSMYARCGSLDDARRVFNRM 391
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++A VR + L L+ M ++ + S++ AC + ++ G+ +H ++
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
+ D+ L T+LL MYAKCG +D A+ VF+ M K++ +W+S+I Y G+GE A+ ++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEG-------------------------WWYFD 476
M G PN TF C L C + +G + D
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 477 LMQRIYKI-----EPKVEHYGCMVDLLGRAGLMRDSEELVSKL----PMEAGPALWGALL 527
M K+ V Y M+ +AG ++ EL S++ +E + +L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 528 SACSTHSNSELGKIVAQHL 546
A N E G+ V +HL
Sbjct: 241 GAVEGLGNLEKGRKVHRHL 259
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 268/467 (57%), Gaps = 10/467 (2%)
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L + ++VH + G +L V N L+ YS + DA +F+ V D V+W+ M+
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 232 GYVKNRE----VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR---D 284
G+ K + G REL D +T +I D+ +++ L + ++ D
Sbjct: 810 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGR-LIHHIVYKFGLD 868
Query: 285 VVSWNC--MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+ + C ++D Y K + AR FD+M R++V+W +++ Y C + E L LFD+M
Sbjct: 869 LDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
P++ ++++V+ ACA +G + + I YIQ+ + + DV+L T+++ M+AKCG +
Sbjct: 929 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 988
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
+ AR +FD M EKNV+SW++MI YG HGQG KAL++F M + G PN T + +L AC
Sbjct: 989 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 1048
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+HAG+V EG +F M Y + V+HY C+VDLLGRAG + ++ +L+ + E L
Sbjct: 1049 SHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGL 1108
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
WGA L AC TH + L + A L+EL+P++PG Y+LLSNIYA+ G+W++V +R +M +
Sbjct: 1109 WGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQ 1168
Query: 583 KELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
+ L+K G + + + + V + R +Y ML +G ++++
Sbjct: 1169 RRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLEL 1215
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 267/468 (57%), Gaps = 10/468 (2%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
R+L + ++VHA+ G ++ V N LI+ YS + DA +F+ V D V+W+ M+
Sbjct: 73 RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 132
Query: 231 DGYVKNRE----VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR--- 283
G+ K + G REL D +T +I D+ +++ L + ++
Sbjct: 133 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGR-LIHHIVYKFGL 191
Query: 284 DVVSWNC--MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
D+ + C ++D Y K + AR FD+M R++V+W +++ Y C E L LF++
Sbjct: 192 DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 251
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M P++ ++++V+ ACA +G + + I YIQ+ + + DV+L T+++ MYAKCG
Sbjct: 252 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 311
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
++ AR +FD M EKNV+SW++MI YG HGQG KAL++F M G P+ T +L A
Sbjct: 312 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYA 371
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C+HAG+V EG +F M Y + V+HY C+VDLLGRAG + ++ +L+ + +E
Sbjct: 372 CSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEG 431
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
LWGA L AC TH + L + A L+EL+ ++PG YVLLSNIYA+ G+W++V +R +M
Sbjct: 432 LWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMS 491
Query: 582 EKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
++ L+K G + + + + V + R +Y ML + ++++
Sbjct: 492 QRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLEL 539
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 193/394 (48%), Gaps = 15/394 (3%)
Query: 68 STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTI 127
+ + + Q+H Q V G+ Q+ A++ L + ++ + FDG+ D+ + +
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANK-LVXFYSYYRALDDAYGLFDGMCVRDSVSWSVM 807
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ F + D + E ++ ++YT P + + C +++L+ G+ +H + K G
Sbjct: 808 VGGFAKVGDYMNCFGTFRE-LIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 866
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
+LD FV +L+ MY C E+ DAR +F+ DLVTW MI GY + + LFD
Sbjct: 867 LDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFD 926
Query: 248 FMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIG 299
M E D +++ +G M A + D + + DV+ MID +AK G
Sbjct: 927 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 986
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
V SAR FDRM +NV+SW+ ++A Y + L LF M+R PN+ +L+S+L
Sbjct: 987 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046
Query: 360 ACANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT-EKNV 417
AC++ G+++ G S + + ++ DV T ++ + + G +D A + +MT EK+
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDE 1106
Query: 418 VSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGP 448
W + + H EKA +E++ + P
Sbjct: 1107 GLWGAFLGACRTHKDVXLAEKAATSLLELQPQNP 1140
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 197/401 (49%), Gaps = 15/401 (3%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+ L +C + + Q+H Q V G+ ++ A++++ + ++ + FDG+ D
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIY-FYSYYRALDDAYGLFDGMCVRD 124
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ + ++ F + D + E ++ ++YT P + + C +++L+ G+ +H
Sbjct: 125 SVSWSVMVGGFAKVGDYINCFGTFRE-LIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH 183
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ K G +LD FV +L+ MY C E+ DAR +F+ DLVTW MI GY + +
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 243
Query: 241 FARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMI 292
+ LF+ M E D +++ +G M A + D + + DV+ MI
Sbjct: 244 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMI 303
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
D YAK G V SAR FDRM +NV+SW+ ++A Y + L LF M+ P++
Sbjct: 304 DMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKI 363
Query: 353 SLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+L S+L AC++ G+++ G ++ S + ++ DV T ++ + + G +D A + +
Sbjct: 364 TLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKS 423
Query: 412 MT-EKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGP 448
MT EK+ W + + H EKA +E++ + P
Sbjct: 424 MTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNP 464
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 263/473 (55%), Gaps = 13/473 (2%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA ++L + +H+ + + D F+ NSLIHMY CG V DAR VF+ P D+V+
Sbjct: 71 ACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVS 130
Query: 226 WNSMIDGYVKN----REVGFARELFDFMPERDIFTWNSMIS-----GYVDVGD-MEAANG 275
W +I GY +N +G ++ FT+ S + G +G+ M A
Sbjct: 131 WTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAV 190
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
++L DV + ++D YA+ + A FD + +N VSWN L+A + R D
Sbjct: 191 KYNLD--EDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETT 248
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L F M R + SV +A A +G ++ G+W+H+++ K K ++ ++L M
Sbjct: 249 LMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGM 308
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAK G M AR VFD + ++++V+WN+M+ + +G G++A+ F E+ K G N TF
Sbjct: 309 YAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITF 368
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL+AC+H G+V EG YFD+M+ Y +EP+++HY VDLLGRAGL++++ V K+P
Sbjct: 369 LSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 427
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
ME A+WGALL AC H N+++G+ A H+ EL+P D GP VLL NIYAS G+WD+
Sbjct: 428 MEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAAR 487
Query: 576 LRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
+R++MK ++K S V + ++ + +Y M E+ ++K
Sbjct: 488 VRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIK 540
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 186/411 (45%), Gaps = 14/411 (3%)
Query: 52 PIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
P + H I+ + IH+ L S L+ D F + ++ C +VS +
Sbjct: 60 PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYC-KCGAVSDARH 118
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDGI D ++ + + P AL + + A+F + +TF K
Sbjct: 119 VFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARF-RPSGFTFTSFLKAAGACG 177
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
G+++HA VK + D++V ++L+ MY+ C ++ A +VF+ + V+WN++I
Sbjct: 178 GRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIA 237
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM--PFRDV 285
G+ + + F M FT++S+ S +G +E + M + +
Sbjct: 238 GFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKL 297
Query: 286 VSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
++ N ++ YAK G++ AR FDR+ R++V+WN +L + + E + F+ +
Sbjct: 298 TAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIR 357
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ + N+ + +SVLTAC++ G++ G+ ++ ++P++ S + + + G++
Sbjct: 358 KYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLK 417
Query: 404 LAR-NVFDNMTEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTP 450
A VF E W +++ MH G+ A + E++ P
Sbjct: 418 EALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGP 468
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
LR D ++ G+ P S++TACA + + IHS++ + R+ D L SL+ M
Sbjct: 47 LRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHM 106
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG + AR+VFD + ++VVSW +I GY + +AL + +M + P+ TF
Sbjct: 107 YCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTF 166
Query: 456 ICVLSACTHAG 466
L A G
Sbjct: 167 TSFLKAAGACG 177
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 288/532 (54%), Gaps = 21/532 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ + E +A ++ + A+ + E +++ + E + +T + CA +
Sbjct: 228 FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGY-EPDRFTLSGVISACANMEL 286
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L G+++H++ ++ G LD V LI+MY+ C G + ARK+F+ ++ +W +M
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 230 IDGYVKNREVGFARELFDF---------MPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
I GYV+ + G+ E D +P FT++S + ++ + +F
Sbjct: 347 ITGYVQ--KGGYDEEALDLFRGMILTHVIPNH--FTFSSTLKACANLAALRIGEQVFTHA 402
Query: 281 PFRDVVSWNC----MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
S NC +I YA+ G + AR FD + +N++S+N ++ Y + + E L
Sbjct: 403 VKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEAL 462
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF+ + + + S+L+ A++G I G+ IH+ + K +K + + +L++MY
Sbjct: 463 ELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY 522
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
++CG ++ A VF++M ++NV+SW S+I G+ HG +ALE+F +M + G PN T+I
Sbjct: 523 SRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYI 582
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSAC+H G+V EGW +F M + + P++EHY CMVD+LGR+G + ++ + ++ +P
Sbjct: 583 AVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPY 642
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
+A +W L AC H N ELGK A+ ++E EP DP Y+LLSN+YAS KWDEV N+
Sbjct: 643 KADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNI 702
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
R+ MKEK L K G S V + V + + +Y L + ++K
Sbjct: 703 RKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK 754
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 226/501 (45%), Gaps = 30/501 (5%)
Query: 57 SHPILQK----LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLS 109
SHP LQ L+ C + F +H +L S L DS + ++ +
Sbjct: 62 SHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKAT 121
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
+F D + ++ F N F AL + M+ N Y F + C+
Sbjct: 122 SIFQLMGSSRDLISWSAMVSCFANNNMGFRAL-LTFVDMIENGYYPNEYCFAAATRACST 180
Query: 170 IRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVC-GEVLDARKVFEDGPVWDLVTWN 227
+ G + +VK G+ + D+ V LI M+ G+++ A KVFE P + VTW
Sbjct: 181 AEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWT 240
Query: 228 SMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVD-----VGDMEAANGLFD 278
MI ++ G A +LF M E D FT + +IS + +G + +
Sbjct: 241 LMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300
Query: 279 LMPFRDVVSWNCMIDGYAKI---GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC-E 334
+ V C+I+ YAK G++ +AR FD++ NV SW ++ YV+ Y E
Sbjct: 301 GLTLDRCVGC-CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEE 359
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L LF MI PN + S L ACAN+ + IG+ + ++ K ++ SL++
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYA+ G +D AR FD + EKN++S+N++I Y + E+ALE+F E+E +G + T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVS 512
F +LS G + +G + R+ K K+ C ++ + R G + + ++
Sbjct: 480 FASLLSGAASIGTIGKGE---QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536
Query: 513 KLPMEAGPALWGALLSACSTH 533
+ + W ++++ + H
Sbjct: 537 DME-DRNVISWTSIITGFAKH 556
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 186/400 (46%), Gaps = 29/400 (7%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-D 217
T+ L K C RS G VH ++ + +LD NSLI +YS CG+ A +F+
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLM 127
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFM--------PERDIF---TWNSMISGYVD 266
G DL++W++M+ + N +GF R L F+ P F T + +V
Sbjct: 128 GSSRDLISWSAMVSCFANNN-MGF-RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVS 185
Query: 267 VGDMEAANGLFDLMPFRDVVSWNCMIDGYAK-IGNVTSARNCFDRMCMRNVVSWNILLAL 325
VGD + DV +ID + K G++ SA F++M RN V+W +++
Sbjct: 186 VGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
++ E + LF MI +P+ +L V++ACANM ++ +GQ +HS + + D
Sbjct: 246 LMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 386 VLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKALEMFM 441
+ L+ MYAKC G M AR +FD + + NV SW +MI GY G E+AL++F
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC----MVDL 497
M PN TF L AC + + G F + ++ C ++ +
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISM 420
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
R+G + D+ + L E + ++ A + + NSE
Sbjct: 421 YARSGRIDDARKAFDIL-FEKNLISYNTVIDAYAKNLNSE 459
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ + + M+ + P+ + L C DIG +H + + ++ D + SL+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 394 TMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
++Y+KCG + A ++F M + ++++SW++M+ + + G +AL F++M + G PN+
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC-MVDLL--GRAGLMRDSEE 509
F AC+ A V G F + + ++ V GC ++D+ GR L+ + +
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDV-CVGCGLIDMFVKGRGDLV-SAFK 226
Query: 510 LVSKLPMEAGPALWGALLS 528
+ K+P E W +++
Sbjct: 227 VFEKMP-ERNAVTWTLMIT 244
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 292/539 (54%), Gaps = 18/539 (3%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
++E H+ + GL L L V+ + FDG+ D N+++
Sbjct: 122 ALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMV 181
Query: 129 KSFLMLNDPFGALSF--YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC 186
++ ++ GAL+ + E V+H+ C +L +G++VHA +++
Sbjct: 182 DGYV--SNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRH 239
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
G E D+ V SL+ MY CG + A +F P +VTWN MI GY N G E F
Sbjct: 240 GLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALN---GCPEEAF 296
Query: 247 DFMPER-------DIFTWNSMISGYVDVGDM---EAANGLFDLMPF-RDVVSWNCMIDGY 295
D + ++ T ++++ + +G F VV +++ Y
Sbjct: 297 DCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMY 356
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
+K+G V S+ F +M + +VSWN ++A Y+ + Y E + LF ++ P+ ++
Sbjct: 357 SKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMS 416
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
+V+ A +G++ + +HSYI + + L++ +++ MYA+CG + +R +FD M K
Sbjct: 417 AVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGK 476
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V+SWN++IMGY +HGQG+ ALEMF EM+ G PN++TF+ VL+AC+ +GM EGW F
Sbjct: 477 DVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQF 536
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+LMQR Y I P++EHYGCM DLLGRAG +R+ + + +P+ +WG+LL+A ++
Sbjct: 537 NLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRND 596
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ + A+ + ELE + G YV+LS++YA G+W++V+ +R M EK L + S+V
Sbjct: 597 IDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIV 655
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 215/482 (44%), Gaps = 84/482 (17%)
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
PDAF+ N +++ F P AL+ Y M+A + +TFP++ K CA + +L EG+
Sbjct: 70 PDAFLHNVVIRGFADAGLPEAALA-AYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRA 128
Query: 179 VHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN- 236
H+ ++ G +++ NSL+ Y+ G V DA +VF+ PV D+VTWNSM+DGYV N
Sbjct: 129 AHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNG 188
Query: 237 ---------RE-----------VGF---------------ARELFDFMP----ERDIFTW 257
RE VG RE+ ++ E+D+
Sbjct: 189 LGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVG 248
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
S++ Y G + +A G+F MP R VV+WNCMI GYA G A +CF +M
Sbjct: 249 TSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQM------ 302
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE-ASLMSVLTACANMGVIDIGQWIHSY 376
+ + E + +++L ACA G+ +H Y
Sbjct: 303 --------------------------KAEGHQVEVVTAINLLAACAQTESSLYGRSVHGY 336
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
+ + + P V+L T+LL MY+K G + + +F MT K +VSWN+MI Y +A
Sbjct: 337 VTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEA 396
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+ +F+E+ + P+ T V+ A G++ + + R+ E + M
Sbjct: 397 ITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVM-H 455
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPAL--WGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
+ R G + S ++ K+ AG + W ++ + H GKI + E++
Sbjct: 456 MYARCGDVVSSRKIFDKM---AGKDVISWNTIIMGYAIHGQ---GKIALEMFSEMKSNGL 509
Query: 555 GP 556
P
Sbjct: 510 QP 511
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 14/326 (4%)
Query: 60 ILQKLESC---STVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
I+ L +C S + + ++H ++ GL QD + +L C +++ + F +
Sbjct: 213 IIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYC-KCGAIASAEGMFATM 271
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
N ++ + + P A + + M A+ + T L CA S G
Sbjct: 272 PSRTVVTWNCMIGGYALNGCPEEAFDCFVQ-MKAEGHQVEVVTAINLLAACAQTESSLYG 330
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY--- 233
+ VH + + F + + +L+ MYS G+V + +F LV+WN+MI Y
Sbjct: 331 RSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYK 390
Query: 234 -VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD----VVSW 288
+ N + EL + D FT ++++ +V +G + + + D +
Sbjct: 391 EMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVT 450
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++ YA+ G+V S+R FD+M ++V+SWN ++ Y L +F M +
Sbjct: 451 NAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQ 510
Query: 349 PNEASLMSVLTACANMGVIDIGQWIH 374
PNE++ +SVLTAC+ G+ D G WI
Sbjct: 511 PNESTFVSVLTACSVSGMADEG-WIQ 535
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/453 (36%), Positives = 249/453 (54%), Gaps = 39/453 (8%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
HA V+ G D FV +L Y+ CG V D RKVF+ V D+V+W M+D Y + R
Sbjct: 172 THALAVRTGALDDGFVGTALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRN 231
Query: 239 VGFARELFDFM------PERDIFTW---------------------------------NS 259
A LF M P++ I ++
Sbjct: 232 YKEALLLFAKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSA 291
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
+IS Y +ME A L++ MP +D+VS M+ GYA+ V AR+ FD M ++VVSW
Sbjct: 292 LISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSW 351
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK 379
+ +++ YV E L LF+ M + +E +++SV++ACAN+G +D +WIH++I+
Sbjct: 352 SAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKN 411
Query: 380 CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEM 439
+ + + +L+ M+AKCG ++LA NVF+ M KNV++W SMI + MHG G+ +L +
Sbjct: 412 SGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRL 471
Query: 440 FMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLG 499
F +M+ G PN+ TF+ +L AC HAG+V EG F M + Y IEPK EHYGCMVDLLG
Sbjct: 472 FEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLG 531
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
RA LM+++ L+ + +E +WG+LL+AC H + +LG A+ +++L+P G VL
Sbjct: 532 RAKLMQEAVSLIESMHLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVL 591
Query: 560 LSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
L IY + + +R +MK + K G S
Sbjct: 592 LLKIYMKSDNLNNAQEVRGVMKLHRVSKETGLS 624
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 182/396 (45%), Gaps = 43/396 (10%)
Query: 77 HTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLND 136
H + +G D F + L + V + FDG+ D ++ S+ +
Sbjct: 173 HALAVRTGALDDGFVGT-ALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRN 231
Query: 137 PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRN 196
AL + KM V + + C IR LR GK +H+ ++ + + +
Sbjct: 232 YKEAL-LLFAKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISS 290
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
+LI +Y+ C + A K++ + P DLV+ +M+ GY +NR+V AR +FD MPE+D+ +
Sbjct: 291 ALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVS 350
Query: 257 WNSMISGYVDVGDMEAANGLFDLMP----------------------FRDVVSW------ 288
W++MISGYVD A LF+ M D W
Sbjct: 351 WSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIK 410
Query: 289 -----------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLR 337
N +ID +AK G + A N F+ M ++NV++W +++ + D LR
Sbjct: 411 NSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLR 470
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIKPDVLLSTSLLTMY 396
LF++M A+PNE + +S+L AC + G++ G+ + S +Q+ I+P ++ +
Sbjct: 471 LFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLL 530
Query: 397 AKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHG 431
+ +M A ++ ++M E NV W S++ MHG
Sbjct: 531 GRAKLMQEAVSLIESMHLEPNVPIWGSLLAACWMHG 566
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANM-GVIDIGQWIHSYIQKCRIKPDVLLSTS 391
C CLR G P +L ++L + A G H+ + D + T+
Sbjct: 136 CACLRRA-----GLPAPGPRALPALLRSAARCEGAGAYVAATHALAVRTGALDDGFVGTA 190
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L YA CG + R VFD M ++VVSW M+ Y ++AL +F +M+ G P+
Sbjct: 191 LAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPD 250
Query: 452 DATFICVLSACTH 464
VL AC H
Sbjct: 251 QLILATVLPACGH 263
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 269/481 (55%), Gaps = 45/481 (9%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
VE N T +L + C EG ++H ++ GF++D ++ NS+I MYS C + DA
Sbjct: 270 VEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSI-DA- 327
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEA 272
A + FD M ++DI TWNS+I+GYV G++E
Sbjct: 328 -----------------------------AAKQFDLMVKKDIVTWNSLITGYVQSGNLEK 358
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A LF+ MP +DVVSW +I G+A G + F M ++ ++W +++ V ++Y
Sbjct: 359 AVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEY 418
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
F +M++ KPN +L VL+A A+M +++ G IH+ + K ++ D+ + SL
Sbjct: 419 EIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSL 478
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
++MY+KCG +D A +F + NVV++N++I G +G G++ALE+F +M+ PN
Sbjct: 479 VSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNH 538
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
TF+ VLSAC H G+V EG YFDLM+ +Y I+P+ +HY CMVDLL RAG+ ++ LVS
Sbjct: 539 ITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVS 598
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
+P + +WGA+L A TH ++ ++ AQ+L ELEP PYV+LSN+++ G +
Sbjct: 599 SMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERK 658
Query: 573 VENLRRIMKEKELEKAVGSS---------LVHPGEFASESIVENCPPHRKCIVYSMLGEI 623
E +R + K + L+K+ G S L H G + ++I E I+Y++ E+
Sbjct: 659 HELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTE-----IIYALAEEV 713
Query: 624 G 624
G
Sbjct: 714 G 714
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 29/279 (10%)
Query: 197 SLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT 256
+L+ Y+ E+ AR+VF P ++ ++N+MI Y + V A ELF MP+R+ +
Sbjct: 91 ALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVS 150
Query: 257 WNSMISGYV-----------------------------DVGDMEAANGLFDLMPFRDVVS 287
+ +MI+G+V VG +E A +FD M +DVVS
Sbjct: 151 YATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVS 210
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
W+ MI G ++G + AR FD+M RNVV+W +++ Y++ + LF M R
Sbjct: 211 WSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGV 270
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+ N +L +L AC + G IH + D L+ S++TMY++C +D A
Sbjct: 271 EVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAK 330
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
FD M +K++V+WNS+I GY G EKA+ +F M ++
Sbjct: 331 QFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQK 369
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 167/381 (43%), Gaps = 21/381 (5%)
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
LV NS I +N + A +F+ MP ++ +W ++++ Y + ++ A +F+ +P
Sbjct: 55 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 114
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+V S+N MI Y + V A F M RN VS+ ++ +V + +L
Sbjct: 115 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHRE- 173
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
KP S ++ + +G ++ I + + DV+ +S+++ + G +
Sbjct: 174 -----KPVIVSSNVLINGYSKVGRVEDAVRIFDGMA----EKDVVSWSSMISGLCRVGKI 224
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
AR +FD M ++NVV+W MI GY + +F+ M + G N T +L AC
Sbjct: 225 VEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEAC 284
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
EG + + + V+ Y ++ + R + D+ L ++
Sbjct: 285 GSFDRYGEG---IQIHGLVLSLGFDVDAYLANSIITMYSRCYSI-DAAAKQFDLMVKKDI 340
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
W +L++ N E + +++ + +D + L +ASEG+ DE L ++M
Sbjct: 341 VTWNSLITGYVQSGNLEKAVFLFENMPQ---KDVVSWTTLICGFASEGRIDEFIGLFQMM 397
Query: 581 KEKELE--KAVGSSLVHPGEF 599
EK+ AV S LV E+
Sbjct: 398 PEKDAIAWTAVISGLVSIEEY 418
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 260/468 (55%), Gaps = 19/468 (4%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y M+ + ++FP + K CA + G+++H + K G E + FV +LI MY
Sbjct: 41 YRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCK 100
Query: 205 CGEVLDARKVFEDGPVWDL--VTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMIS 262
CG V DARKVFE+ P V +N++I GY N +V A +F M E + + +
Sbjct: 101 CGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTML 160
Query: 263 GYVDVGDM------------EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
G V + + + G D +V N I Y K G+V + R FD
Sbjct: 161 GLVPLCTVPEYLWLGRSLHGQCVKGGLD----SEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M ++ +++WN +++ Y + + L L+++M P+ +L+SVL++CA++G IG
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ ++ P+V +S + ++MYA+CG + AR VFD M K++VSW +MI YGMH
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GE L +F +M KRG P+ A F+ VLSAC+H+G+ +G F M+R YK+EP EH
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y C+VDLLGRAG + ++ E + +P+E A+WGALL AC H N ++ ++ ++E E
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE 456
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV-HPG 597
P + G YVL+SNIY+ + + +R +M+E+ K G S V H G
Sbjct: 457 PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 199/456 (43%), Gaps = 33/456 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL+ S S Q+H + G + F + ++ C +F + Q
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSS 118
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+C + S N ++ + +M V + T L +C L G+ +
Sbjct: 119 QLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSL 178
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H + VK G + ++ V NS I MY CG V R++F++ PV L+TWN++I GY +N
Sbjct: 179 HGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLA 238
Query: 240 GFARELFDFMPER----DIFTWNSMISGYV---------DVGDMEAANGLFDLMPFRDVV 286
EL++ M D FT S++S +VG + +NG +V
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP-----NVF 293
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N I YA+ GN+ AR FD M ++++VSW ++ Y L LFD MI+
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Query: 347 AKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+P+ A + VL+AC++ G+ D G + + ++ +++P + L+ + + G +D A
Sbjct: 354 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 413
Query: 406 RNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSA 461
++M E + W +++ +H E A +E E PN+ + ++S
Sbjct: 414 MEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE-----PNNIGYYVLMSN 468
Query: 462 CTHAGMVLEGWWYFDLM--QRIYKIEPK---VEHYG 492
EG W +M +R ++ +P VEH G
Sbjct: 469 IYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 17/251 (6%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
WN+ L + E + L+ M+R + P+ S +L +CA++ + GQ +H ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 379 K--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS--WNSMIMGYGMHGQGE 434
K C +P VL T+L++MY KCG++ AR VF+ + + +S +N++I GY + +
Sbjct: 81 KGGCETEPFVL--TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK--IEPKVEHYG 492
A MF M++ G + + T + ++ CT + W L + K ++ +V
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL---WLGRSLHGQCVKGGLDSEVAVLN 195
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
+ + + G + L ++P++ G W A++S +S + L V + +++
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISG---YSQNGLAYDVLELYEQMKSS 251
Query: 553 D--PGPYVLLS 561
P P+ L+S
Sbjct: 252 GVCPDPFTLVS 262
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 214/346 (61%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D ++N +I YA+ G + AR FD M RN VSW+ ++ YV+ D E LR+F RM
Sbjct: 142 DASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQ 201
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
D +P++ L+ VL ACA G ++ G+W+H Y++ IK ++ T+L+ MY+KCG +
Sbjct: 202 AEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQ 261
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
LA +VF+ M KNV++W +MI G MHG+G +A+ +F +ME G P+D FI VL ACT
Sbjct: 262 LAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACT 321
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
HAG+V +G FD M R Y I+PK+EHYGCMVDLL R G + +++E++ K+PME +W
Sbjct: 322 HAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIW 381
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GAL++ C H N E + VA+H + LEP G YVLLSNIYA+ G+ +R +M+EK
Sbjct: 382 GALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREK 441
Query: 584 ELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
++K G S V + IV + R + S EI ++++
Sbjct: 442 GVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRL 487
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 42/300 (14%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYS-VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
VH VK G + + V N+LI +++ G + D + D T+N++I Y +
Sbjct: 98 VHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAG 157
Query: 238 EVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVV----------- 286
+ AR LFD MP R+ +W++M++GYV GD A +F M DV
Sbjct: 158 RLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLA 217
Query: 287 -----------SW-----------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVS 318
W ++D Y+K G V A + F+RM +NV++
Sbjct: 218 ACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLA 277
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYI 377
W ++ E + LF +M +P++ + + VL AC + G++D G + S +
Sbjct: 278 WTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMV 337
Query: 378 QKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKA 436
+K IKP + ++ + A+ G + A+ + M E + + W +++ G H E A
Sbjct: 338 RKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFA 397
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 11/223 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + +A + ++ ++ D AL + +M A+ V + + CA
Sbjct: 165 LFDEMPARNAVSWSAMVNGYVQAGDGREALRIF-ARMQAEDVRPDDTVLVGVLAACAQHG 223
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+L +GK VH + G +++LF +L+ MYS CGEV A VFE +++ W +MI
Sbjct: 224 ALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIK 283
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR---- 283
G + A LF M I + ++ G ++ LFD M +
Sbjct: 284 GLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIK 343
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ + CM+D A+ G + A+ +M M + + W L+A
Sbjct: 344 PKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMA 386
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 288/561 (51%), Gaps = 39/561 (6%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVL 96
+ P + D Q P D SH + + +C +H Q+L G+ AA V
Sbjct: 12 SSPAKIYFPADRQASP--DESH-FISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVS 68
Query: 97 KKLCTSL-SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH 155
C+SL S S+ F +E + F+ N +++ L N F + ++ M+ V+
Sbjct: 69 ---CSSLLKSPDYSLSIFRNSEERNPFVLNALIRG-LTENARFESSVRHFILMLRLGVKP 124
Query: 156 NHYTFPLLGKVCA--GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ TFP + K + G R L G+ +HA +K + D FVR SL+ MY+ G++ A +
Sbjct: 125 DRLTFPFVLKSNSKLGFRWL--GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQ 182
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA 273
VFE+ P D + + I WN +I+GY DM A
Sbjct: 183 VFEESP---------------------------DRIKKESILIWNVLINGYCRAKDMHMA 215
Query: 274 NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
LF MP R+ SW+ +I GY G + A+ F+ M +NVVSW L+ + + DY
Sbjct: 216 TTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYE 275
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ + M+ KPNE ++ +VL+AC+ G + G IH YI IK D + T+L+
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALV 335
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MYAKCG +D A VF NM K+++SW +MI G+ +HG+ +A++ F +M G P++
Sbjct: 336 DMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEV 395
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
F+ VL+AC ++ V G +FD M+ Y IEP ++HY +VDLLGRAG + ++ ELV
Sbjct: 396 VFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVEN 455
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P+ W AL AC H + V+Q+L+EL+P G Y+ L +AS+G +V
Sbjct: 456 MPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDV 515
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
E R ++++ E+++G S +
Sbjct: 516 EKRRLSLQKRIKERSLGWSYI 536
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 242/392 (61%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I V +A ++FE+ P +++++ +M+DGY K E+ AR LF+ MP++++
Sbjct: 144 NAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVV 203
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+W MISGYV+ G + A LF+ MP +++V+ MI GY K G A+ FD++ R+
Sbjct: 204 SWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 263
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+ SWN ++ Y + E L+L +M++ +P+ ++L+SVLTAC+++ + G+ H
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHV 323
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ K + + + +L+TMY KCG + + F + +VVSWN+MI + HG ++
Sbjct: 324 LVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDR 383
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
AL F EM P+ TF+ +LSAC HAG V E +F+ M YKI + EH+ C+V
Sbjct: 384 ALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLV 443
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L R G + + +++ ++P EA +WGALL+AC H N +LG++ A+ ++ELEP++ G
Sbjct: 444 DILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSG 503
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
YV+LSNIYA+ G W EV +R +M+E+ ++K
Sbjct: 504 AYVVLSNIYAAAGMWGEVTRVRGLMREQGVKK 535
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
+ FD I D N ++ + AL + + M+ ++ +H T + C+ +
Sbjct: 254 ILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ-MLKMGMQPDHSTLISVLTACSSL 312
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SL+EG+K H ++K G+E + + N+LI MY CG +LD+ F D+V+WN+MI
Sbjct: 313 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 372
Query: 231 DGYVK----NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM--PFRD 284
+ + +R + E+ E D T+ S++S G + + F+ M ++
Sbjct: 373 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKI 432
Query: 285 VVS---WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
V + C++D ++ G V A M + W LLA
Sbjct: 433 VXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLA 476
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 255/465 (54%), Gaps = 41/465 (8%)
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C G + G HA + G D FVR +L+ Y+ CG V DARKVF+ V D+V+W
Sbjct: 82 CVGAGAYVRG--AHALAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSW 139
Query: 227 NSMIDGYVKNRE-----VGFAR------------------------------ELFDFMPE 251
M+D Y + R + FA+ + +M
Sbjct: 140 GVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYMLV 199
Query: 252 RDIFT----WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
DI +++I+ Y ME A L++ MP +D+VS M+ GYA+ AR
Sbjct: 200 SDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYI 259
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD M ++VVSW+ +++ Y E L LF+ M +P+E +++SV++ACAN+G +
Sbjct: 260 FDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSL 319
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D +WIH++I+ + + + +L+ M+AKCG ++LA N+F+ M +KNV++W SMI +
Sbjct: 320 DKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAF 379
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
MHG G+ AL +F +M G PN+ TF+ +L AC HAG+V EG F M + Y IEPK
Sbjct: 380 AMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPK 439
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
EHYGCMVDLLGRA LM+++ L+ + + +WG+LL+AC H + +LG A+ ++
Sbjct: 440 HEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAAKKIL 499
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+L+P G VLLS IY ++ + +R +MK + + K G S
Sbjct: 500 QLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKLQGVSKETGLS 544
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 42/360 (11%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FDG+ D ++ S+ + AL + KM V + + C IR
Sbjct: 128 FDGMAVRDVVSWGVMLDSYCQTRNYKEAL-LQFAKMKNSGVLSDQLILATVLSACGHIRH 186
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
LR GK +H+ ++ ++ + ++LI++Y+ C + A K++ P DLV+ +M+ G
Sbjct: 187 LRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFG 246
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP----------- 281
Y +NR+ AR +FD MPE+D+ +W++MISGY D A LF+ M
Sbjct: 247 YARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTM 306
Query: 282 -----------FRDVVSW-----------------NCMIDGYAKIGNVTSARNCFDRMCM 313
D W N +ID +AK G + A N F+ M
Sbjct: 307 LSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQ 366
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
+NV++W ++ + D L LF++M +PNE + +++L AC + G++ G+ +
Sbjct: 367 KNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSL 426
Query: 374 -HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHG 431
S +Q+ I+P ++ + + +M A N+ ++M + NV W S++ MHG
Sbjct: 427 FSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHG 486
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI---HSYIQKCRIKPDVLLS 389
C CLR G P +L ++L + A + G ++ H+ + D +
Sbjct: 56 CACLRR-----TGLPPPGPRALPALLRSAAR--CVGAGAYVRGAHALAFRVGSLDDGFVR 108
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT 449
T+L+ YA CG + AR VFD M ++VVSW M+ Y ++AL F +M+ G
Sbjct: 109 TALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVL 168
Query: 450 PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEE 509
+ VLSAC H + G M + I +++L M +E+
Sbjct: 169 SDQLILATVLSACGHIRHLRTGKSIHSYML-VSDILINAHLSSALINLYASCASMEMAEK 227
Query: 510 LVSKLP 515
L + +P
Sbjct: 228 LYNGMP 233
>gi|354805201|gb|AER41619.1| CRR4 [Oryza glumipatula]
Length = 745
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 278/529 (52%), Gaps = 78/529 (14%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLD-- 210
V N +TF L + CA + R VH +IV+CGF D+FV+N+L+ +Y CG
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALVDVYHRCGGGGGVG 166
Query: 211 -ARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD 269
AR+VF++ D+V+WNS++ Y+ + + A F+ MPER++ +WN++++G+ +GD
Sbjct: 167 AARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGD 226
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
M A +FD MP R+ VSWN MI GYA G+V +AR+ FDRM ++VVSW +++ Y +
Sbjct: 227 MVTARAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKI 286
Query: 330 KD-------------------------------YCECLRLFD-RMIRGDAKPNEASLMSV 357
D Y E LR F M+ G +P+EA+L+SV
Sbjct: 287 GDLDTTNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSV 346
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
++ACA +G ++ WI S+I K I V L +L+ M+AKCG + A+++F M + +
Sbjct: 347 VSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCI 406
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
++W +MI G+ + AL ++ M + G +D FI L+AC H G++ EGW F+
Sbjct: 407 ITWTTMISGFAFN---RDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNE 463
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
M Y I+P++EHYGCMVDLLGRA E
Sbjct: 464 MVERYNIQPRMEHYGCMVDLLGRA-----------------------------------E 488
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
L + V++ + ELEP + VL+SN A EG+WD V + R M+ +EK GSS + G
Sbjct: 489 LIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVG 548
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD-----VASQISIQ 641
E + ++ R+ ++ + + A M+ + VAS +IQ
Sbjct: 549 SEVHEFLAKDTRHKRRKEIFETVDGLMALMRHTEQAHWDLFVASTGAIQ 597
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 272/508 (53%), Gaps = 16/508 (3%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H + +G + D+F AS L KL LS V + FD + PD + NT++
Sbjct: 136 LHGLSVAAGYAADTFVAS-ALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGL---- 190
Query: 136 DPFG-ALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
P AL + + V + T + A + G+ VH VKCG V
Sbjct: 191 -PGSVALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHV 249
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD- 253
L+ +YS CG++ AR +F+ DLV +N++I GY N V + ELF + D
Sbjct: 250 VTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDW 309
Query: 254 ---IFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIGNVTSARN 306
T ++I Y G A L + D + + Y ++ ++ SAR+
Sbjct: 310 RPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARS 369
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
FD M + + SWN +++ Y + + LF M + +PN ++ S L+ACA +G
Sbjct: 370 IFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGA 429
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ +G W+H I K ++ +V + T+L+ MYAKCG + AR++FD M KNVVSWN+MI G
Sbjct: 430 LSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISG 489
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
YG+HG+G +AL+++ M P +TF+ VL AC+H G+V EG F +M Y+I P
Sbjct: 490 YGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISP 549
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA-GPALWGALLSACSTHSNSELGKIVAQH 545
+EH CMVDLLGRAG + ++ +L+S+ P A GP +WGALLSAC H NS+L K+ +Q
Sbjct: 550 GIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDLAKLASQK 609
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEV 573
L EL+ + G YVLLSN+Y S+ + E
Sbjct: 610 LFELDSENAGYYVLLSNLYTSKKHYSEA 637
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 313/594 (52%), Gaps = 42/594 (7%)
Query: 43 FTDTDNQRLPIVDLSHPILQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKL 99
FT +P + + P L L++C+ ++ Q+H L GL+ D F+A+ ++
Sbjct: 40 FTRMQAHAVPSNNFTFPAL--LKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAY 97
Query: 100 CTSLSSVSLSVLFFDGIQEPDAFMCN-TIMKSFLMLN-------DPFGALSFYYEKMMAK 151
+ FD + E + + T + S N FG + + ++
Sbjct: 98 -GKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSE 156
Query: 152 FVEHNHYTFPLLGKVCA---GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
+ + L CA G LR G VH +VK GF + + NS++HMYS C +V
Sbjct: 157 CCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDV 216
Query: 209 LDARKVFEDGPV--WDLVTWNSMIDGYVKNREVGFARELFDFMP-------ERDIFTWNS 259
A +VF P+ D+V+WNS+I G+ N E A F+ M E + T +
Sbjct: 217 GGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIA 276
Query: 260 MISGYVDVGDMEAANGLFD--------LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
++ ++G +E ++ + + L+ +DVV ++D +A+ GN+ AR FD +
Sbjct: 277 LLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGV 336
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRM------IRGDAKPNEASLMSVLTACANMG 365
+NVV W+ ++A Y + E LRLF +M + + KPN +L+SV+ AC+ +G
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE--KNVVSWNSM 423
IH Y + D ++++L+ M AKCG ++ R VF M E + VVSW+SM
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSM 456
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G+HG+G++ALE+F EM G PN+ T+I VLSAC+HAG+V +G F+ M++ Y
Sbjct: 457 IGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYG 516
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+ P +HY C+VDLLGRAG + ++ ++ +P++A ALWG+LL+AC H N +LG+IV
Sbjct: 517 MSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVE 576
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ ++ L+ G +VLL+N+Y G+WD+V +R ++ L K G S + G
Sbjct: 577 KKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIG 630
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 186/388 (47%), Gaps = 41/388 (10%)
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I D F N+++ N P AL+F+ +M A V N++TFP L K CA +R L
Sbjct: 13 ISHKDTFHWNSLIAKNATQN-PQTALTFF-TRMQAHAVPSNNFTFPALLKACAALRRLLP 70
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP--VWDLVTWNSMIDGY 233
+VHA + + G D F +L+ Y CG A +VF++ P D+V+W ++I Y
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-------------------EAAN 274
N V A + F M R + W+ VDV + A +
Sbjct: 131 SSNGCVDEAFKAFGRM--RWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188
Query: 275 GLFDLMPFRDVVSW-NCMIDGYAKIGNVTSARNCFDRMCM--RNVVSWNILLALYVRCKD 331
GL F N M+ Y+ +V A F+ + + R+VVSWN L++ + +
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGE 248
Query: 332 YCECLRLFDRMIR---GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR----IKP 384
LR F+ M+ +PN +++++L +CA +G ++ W+H YI +
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
DV++ T+LL M+A+CG + LAR +FD + KNVV W++MI GY E+AL +F +M
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQML 368
Query: 445 KRGP------TPNDATFICVLSACTHAG 466
G PN T + V++AC+ G
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLG 396
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 182/473 (38%), Positives = 259/473 (54%), Gaps = 54/473 (11%)
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLI-HMYSVCGEVLD----ARKVFEDGPVWDL 223
G ++ + ++HA I++ L N ++ H SVCG LD A VF +L
Sbjct: 18 GRKTRTQLPQIHAHILR----HHLHQSNQILSHFISVCG-ALDKMGYANLVFHQTQNPNL 72
Query: 224 VTWNSMIDGY---------------VKNREVGFARELFDFMP------------------ 250
+ +NSMI GY +KNR G + F F P
Sbjct: 73 LLFNSMIKGYSLCGPSENSLLLFSQMKNR--GIWPDEFTFAPLLKSCSGICDNRIGKGVH 130
Query: 251 --------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
ER +I Y G ME A +FD M RDV+ WN MI G+ K+G++
Sbjct: 131 GVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDIE 190
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
F +M R+VVSWN ++A + E L LF M +P++A+++++L CA
Sbjct: 191 MGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCA 250
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVL-LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+G +D+G+WIHSY + R+ D + + SL+ Y KCG+++ A VF+ M +KNVVSWN
Sbjct: 251 RLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWN 310
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+MI G +G+GE ++F EM +G PNDATF+ VLS C HAG+V G F M
Sbjct: 311 AMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVD 370
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+K+EPK+EH+GCMVDLL R G M ++ +LV +PM LWG+LLSA T + + +
Sbjct: 371 HKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAEC 430
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ L+ELEP + G YVLLSN+YA +GKWDEVE +R +MKEK + K G S+V
Sbjct: 431 AVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 202/430 (46%), Gaps = 47/430 (10%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL+ L T + QIH +L L Q + S + +C +L + + L F Q P
Sbjct: 12 ILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFIS-VCGALDKMGYANLVFHQTQNP 70
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+ + N+++K + + +L + +M + + + +TF L K C+GI R GK V
Sbjct: 71 NLLLFNSMIKGYSLCGPSENSL-LLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGV 129
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H ++ GFE +R +I +Y+ CG + DA+KVF++ D++ WN MI G+ K ++
Sbjct: 130 HGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDI 189
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF----------------DLMP-- 281
LF M +R + +WNSMI+G G A LF ++P
Sbjct: 190 EMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVC 249
Query: 282 ---------------------FRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
RD +S N ++D Y K G + +A F+ M +NVVSW
Sbjct: 250 ARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSW 309
Query: 320 NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ- 378
N +++ LF+ MI +PN+A+ + VL+ CA+ G+++ G+ + + +
Sbjct: 310 NAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTV 369
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHG---QGE 434
+++P + ++ + A+ G M+ AR++ M + N V W S++ Y G E
Sbjct: 370 DHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAE 429
Query: 435 KALEMFMEME 444
A++ +E+E
Sbjct: 430 CAVKELIELE 439
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 295/586 (50%), Gaps = 52/586 (8%)
Query: 93 SRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF 152
++ L L + S+ + FD + P A +C + LS + E + A
Sbjct: 15 TQPLHALLSDASTYRAARHLFDAVPRPTAALCCAFVSVL-------SKLSLHQELIEAVS 67
Query: 153 VEHNHY------TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
H PL+ K CA + +G + H + G D+FV+ +L+ Y+ G
Sbjct: 68 SLHRRGGAIPSGCIPLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNG 127
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVD 266
+ A FE+ P+ D + N +I GY ++ +V AR LFD MP + +WNSMI+ Y
Sbjct: 128 NMDSAVMAFEEMPIKDPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAH 187
Query: 267 VGDMEAANGLFDLM--------------------------------------PFRDVVSW 288
G+ + A LFD M ++V+
Sbjct: 188 GGEFQEALTLFDQMLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVH 247
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
+++ Y K + AR FDRM R+VV+W+ ++A Y E L LF+RM + K
Sbjct: 248 TALMEMYVKCRAIDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCK 307
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PNE +L+ VL+ACA +G ++G+ I SYI+ + L ++L+ MY KCG + AR+V
Sbjct: 308 PNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDV 367
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F M +K V++WNSMI G ++G E A+ ++ EM G PN+ TF+ +L+ACTHAG+V
Sbjct: 368 FHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLV 427
Query: 469 LEGWWYFDLMQRIYK-IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+G +F M++ + P+VEH C+VDLL ++G + ++ + + + +E +W LL
Sbjct: 428 DKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLL 487
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SAC H++ EL K+ A L+ LEP YVLLSNIYA G W +V +R +M+ K L+K
Sbjct: 488 SACRAHADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQK 547
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRD 633
S + +V++ R +Y+++ +G Q++ D
Sbjct: 548 LSAYSWIELDGEVHRFLVQDTYHPRSAEIYNVVDGLGLQLERTSPD 593
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 258/438 (58%), Gaps = 14/438 (3%)
Query: 180 HARIV-KCGFELDLFVRNSLIHMYSVCGEVLDA----RKVFEDGPVWDLVTWNSMIDGYV 234
HAR++ + ++ N++ +Y+ L A R +F GP D T+ ++
Sbjct: 39 HARLLFDAVYHPSTYLYNTMFRVYAASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACS 98
Query: 235 KNREVGFAREL----FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
+ +EL F +F NS+I Y M++A +FD M +RD+ SW
Sbjct: 99 ALAHLLKGQELHCQALKFGLGGHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTT 158
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
++ YA +V +AR FD M R+VVS++ +LA YVR + E L LF + +P+
Sbjct: 159 LLACYANSCSVEAARKVFDEMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPS 218
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL---LSTSLLTMYAKCGVMDLARN 407
++ +MSVL ACAN+G +D+G+W++S++ C K D + ++T+L+ M+ KCG ++ A
Sbjct: 219 DSCVMSVLCACANLGALDVGRWVYSFV--CHSKGDYVDSRIATALIDMFFKCGSIEHALL 276
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ EK+V W +M+ G MHG GE+ +E F +M G P++ TF+ +LS C+H+G+
Sbjct: 277 VFEGAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGL 336
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG +YFD M+ + +EP VEH+GC+VDLLGRAGL+ + +L+S++P E A+WGALL
Sbjct: 337 VNEGLYYFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALL 396
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+AC + N E+G++ AQ L++ EP + Y+ L ++Y G+WDEVE ++ MKE K
Sbjct: 397 NACRVYKNVEVGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRK 456
Query: 588 AVGSSLVHPGEFASESIV 605
G SL+ G E +V
Sbjct: 457 GPGCSLIEVGGICYEFVV 474
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 210/469 (44%), Gaps = 60/469 (12%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
++E ++H L+ SGL Q +++ +S SS+ + L FD + P ++ NT+ +
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFR 60
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+ P AL + M + YTFP L K C+ + L +G+++H + +K G
Sbjct: 61 VYAASPTPLHAL-LLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLG 119
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
+FV NSLIH+Y + AR+VF+ D+ +W +++ Y + V AR++FD M
Sbjct: 120 GHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEM 179
Query: 250 PERDIFTWNSMISGYVDVGDMEAANGLF-DLMPFR---------------------DVVS 287
PER + ++++M++ YV A LF +L + DV
Sbjct: 180 PERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGR 239
Query: 288 W------------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
W +ID + K G++ A F+ ++V W +L+
Sbjct: 240 WVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMH 299
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDVLL 388
+ + F++M+ KP+E + +++L+ C++ G+++ G + ++ ++P V
Sbjct: 300 GLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEH 359
Query: 389 STSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
++ + + G++D A + M E N W +++ ++ GE A + ++ E
Sbjct: 360 FGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIKDE 419
Query: 445 KRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
N A ++ +LS AG W + K++ K++ GC
Sbjct: 420 PW----NGALYMTLLSLYREAGR----W------DEVEKVKLKMKEVGC 454
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 283/529 (53%), Gaps = 14/529 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
++H ++ G D L + + + L FD + D N ++ +
Sbjct: 216 EVHLHVIRYGFESD-VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ L ++ M FV+ + T + C + R G++VH ++K GF ++ V
Sbjct: 275 DVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSV 333
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
NSLI M+S G +A VF DLV+W +MI GY KN A E + M
Sbjct: 334 NNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGV 393
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW----NCMIDGYAKIGNVTSARN 306
D T S++S +G ++ L + + S+ N +ID Y+K + A
Sbjct: 394 VPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453
Query: 307 CFDRMCMRNVVSW-NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
F R+ +NV+SW +I+L L + + + E L F +MI KPN +L+SVL+ACA +G
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSF-EALFFFQQMIL-SLKPNSVTLVSVLSACARIG 511
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+ IH++ + + D L +LL MY +CG M+ A N F N EK+V SWN ++
Sbjct: 512 ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF-NSCEKDVASWNILLT 570
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY G+G A+E+F +M + P++ TF +L AC+ +GMV +G YF+ M+ + I
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P ++HY +VDLLGRAG + D+ E + K+P++ PA+WGALL+AC + N ELG++ AQH
Sbjct: 631 PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQH 690
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ E++ + G Y+LL N+YA GKWDEV +R+IM+E L G S V
Sbjct: 691 IFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWV 739
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 178/397 (44%), Gaps = 73/397 (18%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+ L ++C R+ EG +VH+ + K L + + N+L+ M+ G++++A VF
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 219 PVWDLVTWNSMIDGYVKNRE-------------VGFARELFDF---------MP------ 250
DL +WN ++ GY K VG +++ F +P
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 251 -----------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
E D+ N++I+ YV GD+ +A +FD MP RD +SWN MI GY +
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE-- 273
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC-ECLRLFDRMIRGDAKPNEASLMSVL 358
D C E LRLF M P+ ++ SV+
Sbjct: 274 ------------------------------NDVCLEGLRLFFMMREFFVDPDLMTMTSVI 303
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+AC +G +G+ +H Y+ K +V ++ SL+ M++ G D A VF M K++V
Sbjct: 304 SACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLV 363
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW +MI GY +G EKA+E + ME G P++ T VLSAC G++ +G +
Sbjct: 364 SWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
R + V ++D+ + + + E+ ++P
Sbjct: 424 DRT-GLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
D M E + +++L C G +HSY+ K + V L +LL+M+ +
Sbjct: 82 LDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVR 141
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G + A VF M E+++ SWN ++ GY G ++AL ++ M G P+ TF CV
Sbjct: 142 FGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCV 201
Query: 459 LSAC 462
L C
Sbjct: 202 LRTC 205
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 308/554 (55%), Gaps = 21/554 (3%)
Query: 57 SHPILQK--LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
+ P+L L++C+ V F+ QIH ++ SGL D F + +L + +
Sbjct: 116 AKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRK 175
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDG+ D +++ ++ + P +L ++ KM+A VE N +T + K C+ +
Sbjct: 176 VFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW-KMLAYGVEPNAFTLSAVIKACSELG 234
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L+ G+ H ++ GF+ + + ++LI M+ + DAR++F++ D + W S+I
Sbjct: 235 DLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIIS 294
Query: 232 GYVKNREVGFARELFDFMPER-----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR--- 283
+N A F M D FT+ ++++ ++G ++ + +
Sbjct: 295 ALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFC 354
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+VV + ++D Y K G+V ++ FDRM ++N VSW+ LL Y + D+ +++F +M
Sbjct: 355 GNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM 414
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGV 401
K + ++L CA + + G+ +H YI+K + DV++ ++L+ +YAKCG
Sbjct: 415 ----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWR-DVIVESALVDLYAKCGC 469
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
++ A+ +FD M +N+++WNSMI G+ +G+GE+AL +F +M K G P+ +FI +L A
Sbjct: 470 IEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFA 529
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C+H G+V EG YF M + Y I+ +EHY CMVDLLGRAGL+ ++E L+ +
Sbjct: 530 CSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSS 589
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
LW ALL AC+T +N E+ + +A+ +MELEP YVLL+N+Y + G+W++ +RR+MK
Sbjct: 590 LWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMK 649
Query: 582 EKELEKAVGSSLVH 595
++ + K G S +
Sbjct: 650 DRGVNKMPGKSWIE 663
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L+L + G+ S+L C + + G IH+++ K ++ D + SLLT+
Sbjct: 103 LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 162
Query: 396 YAKCGV-MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
Y K G R VFD + K+V+SW SMI GY G+ +LE+F +M G PN T
Sbjct: 163 YFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 222
Query: 455 FICVLSACTHAGMVLEGWWYFD-LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
V+ AC+ G + G + ++ R + + ++D+ GR + D+ +L +
Sbjct: 223 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIAS--ALIDMHGRNCALDDARQLFDE 280
Query: 514 LPMEAGPALWGALLSACS 531
L +E W +++SA +
Sbjct: 281 L-LEPDAICWTSIISALT 297
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 266/448 (59%), Gaps = 16/448 (3%)
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC--GEVLDARKVFEDGPVWDLVTWNSMI 230
+++ K++HAR+++ GFE + FV +I + G++ A VFE D +N+MI
Sbjct: 1 MKDLKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMI 60
Query: 231 DGYVKNREVGFARELFDFMPER----DIFTWNSMIS-----GYVDVGDMEAANGLFDLMP 281
G+ K + A + + M ER D FT++ ++ G V +G + + L +
Sbjct: 61 RGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLN 120
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
V N ++ Y ++ ++R F+ + +V+WNI++ +V C + E L +F R
Sbjct: 121 -SHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSR 179
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M++ +P+EA+ + +L+AC+ +G +D G+W+HS I ++ SLL MYAKCG
Sbjct: 180 MLKFGIEPDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGA 239
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM-EKRGPTPNDATFICVLS 460
+ A +F+ M +KN V+WN+MI+G HG +AL +F M E++ P+D TF+ VLS
Sbjct: 240 LQEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLS 299
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+H GMV +GW +FD+M++ Y I+P ++HYGCMVD+LGRAG + ++ L+S +PM+
Sbjct: 300 ACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNA 359
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+W LL+AC H N ELGK V + L+ELEP YVLL+N YAS G+W+E +R+ M
Sbjct: 360 IVWRTLLAACRLHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRKTM 419
Query: 581 KEKELEK-AVGSSLV--HPGEFASESIV 605
++ ++K G+S+V HP + E ++
Sbjct: 420 HKRGVQKPEPGNSVVGRHPSLRSDEPLL 447
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 223/463 (48%), Gaps = 31/463 (6%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL--SSVSLSVLFFDGIQEPDAFMCNTI 127
+K+ QIH +++ G Q+ F +V+ C + ++ +V F+ I +PDAF+ NT+
Sbjct: 1 MKDLKQIHARVIQLGFEQNRFVVGKVIV-FCAAAEHGDMNYAVSVFEKIGDPDAFIFNTM 59
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
++ F NDP A YY++M + + + +TF L KVC + + G+ +H +K G
Sbjct: 60 IRGFGKANDPRKAFD-YYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRG 118
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
+FVRN+L+HMY ++ +R++FE+ P +LV WN +ID +V + A E+F
Sbjct: 119 LNSHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFS 178
Query: 248 ----FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP------FRDVVSWNCMIDGYAK 297
F E D T+ ++S +G ++ + + +V N ++D YAK
Sbjct: 179 RMLKFGIEPDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVN--NSLLDMYAK 236
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMS 356
G + A F+ M +N V+WN ++ E L LF M+ P++ + +
Sbjct: 237 CGALQEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLV 296
Query: 357 VLTACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
VL+AC++ G++D G ++K I+P + ++ + + G ++ A + NM +
Sbjct: 297 VLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQ 356
Query: 416 -NVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
N + W +++ +HG G++ + +E+E D + VL A T+A G
Sbjct: 357 CNAIVWRTLLAACRLHGNVELGKQVRKQLLELEP------DHSSDYVLLANTYAS---AG 407
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
W + R + V+ ++GR +R E L+S L
Sbjct: 408 RWNEAMRVRKTMHKRGVQKPEPGNSVVGRHPSLRSDEPLLSFL 450
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 281/552 (50%), Gaps = 72/552 (13%)
Query: 51 LPIVDLSHP-------ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLC-TS 102
+P L H ++ L C+ + Q+H ++ +GLSQ S+ +++++ L
Sbjct: 29 IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVD 88
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ S +L F + P+ F+ +++ + L + +Y +M V +TF
Sbjct: 89 VPMGSYPLLVFGQVNYPNPFLWTAMIRGY-ALQGLLSESTNFYTRMRRDGVGPVSFTFSA 147
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
L K CG L++ + G+ + A+ +
Sbjct: 148 LFKA-------------------CGAALNMDL-----------GKQVHAQTI-------- 169
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
+I G+ D++ NSMI YV G + A +FD M
Sbjct: 170 ------LIGGFAS-----------------DLYVGNSMIDLYVKCGFLGCARKVFDEMSE 206
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
RDVVSW +I YAK G++ SA FD + +++V+W ++ Y + E L F +M
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCG 400
+ +E +L V++ACA +G + WI ++ P +V++ ++L+ MY+KCG
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
D A VF+ M E+NV S++SMI+GY MHG+ AL++F +M K PN TFI +LS
Sbjct: 327 SPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGP 520
AC+HAG+V +G F M++ + + P +HY CMVDLLGRAG + ++ +LV +PME
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNG 446
Query: 521 ALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIM 580
+WGALL AC H N ++ +I A L +LEP G Y+LLSNIYAS G+W+EV LR+++
Sbjct: 447 GVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVI 506
Query: 581 KEKELEKAVGSS 592
+EK +K G S
Sbjct: 507 REKGFKKNPGCS 518
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 283/529 (53%), Gaps = 14/529 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
++H ++ G D L + + + L FD + D N ++ +
Sbjct: 216 EVHLHVIRYGFESD-VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ L ++ M FV+ + T + C + R G++VH ++K GF ++ V
Sbjct: 275 DVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSV 333
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
NSLI M+S G +A VF DLV+W +MI GY KN A E + M
Sbjct: 334 NNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGV 393
Query: 253 --DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW----NCMIDGYAKIGNVTSARN 306
D T S++S +G ++ L + + S+ N +ID Y+K + A
Sbjct: 394 VPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453
Query: 307 CFDRMCMRNVVSW-NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
F R+ +NV+SW +I+L L + + + E L F +MI KPN +L+SVL+ACA +G
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSF-EALFFFQQMILS-LKPNSVTLVSVLSACARIG 511
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+ IH++ + + D L +LL MY +CG M+ A N F N EK+V SWN ++
Sbjct: 512 ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF-NSCEKDVASWNILLT 570
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY G+G A+E+F +M + P++ TF +L AC+ +GMV +G YF+ M+ + I
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P ++HY +VDLLGRAG + D+ E + K+P++ PA+WGALL+AC + N ELG++ AQH
Sbjct: 631 PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQH 690
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ E++ + G Y+LL N+YA GKWDEV +R+IM+E L G S V
Sbjct: 691 IFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWV 739
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 178/397 (44%), Gaps = 73/397 (18%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+ L ++C R+ EG +VH+ + K L + + N+L+ M+ G++++A VF
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 219 PVWDLVTWNSMIDGYVKNRE-------------VGFARELFDF---------MP------ 250
DL +WN ++ GY K VG +++ F +P
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215
Query: 251 -----------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
E D+ N++I+ YV GD+ +A +FD MP RD +SWN MI GY +
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE-- 273
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC-ECLRLFDRMIRGDAKPNEASLMSVL 358
D C E LRLF M P+ ++ SV+
Sbjct: 274 ------------------------------NDVCLEGLRLFFMMREFFVDPDLMTMTSVI 303
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+AC +G +G+ +H Y+ K +V ++ SL+ M++ G D A VF M K++V
Sbjct: 304 SACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLV 363
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW +MI GY +G EKA+E + ME G P++ T VLSAC G++ +G +
Sbjct: 364 SWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
R + V ++D+ + + + E+ ++P
Sbjct: 424 DRT-GLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
D M E + +++L C G +HSY+ K + V L +LL+M+ +
Sbjct: 82 LDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVR 141
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G + A VF M E+++ SWN ++ GY G ++AL ++ M G P+ TF CV
Sbjct: 142 FGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCV 201
Query: 459 LSAC 462
L C
Sbjct: 202 LRTC 205
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 313/594 (52%), Gaps = 42/594 (7%)
Query: 43 FTDTDNQRLPIVDLSHPILQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKL 99
FT +P + + P L L++C+ ++ Q+H L GL+ D F+A+ ++
Sbjct: 40 FTRMQAHAVPSNNFTFPAL--LKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAY 97
Query: 100 CTSLSSVSLSVLFFDGIQEPDAFMCN-TIMKSFLMLND-------PFGALSFYYEKMMAK 151
+ FD + E + + T + S N FG + + ++
Sbjct: 98 -GKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSE 156
Query: 152 FVEHNHYTFPLLGKVCA---GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEV 208
+ + L CA G LR G VH +VK GF + + NS++HMYS C +V
Sbjct: 157 CCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDV 216
Query: 209 LDARKVFEDGPV--WDLVTWNSMIDGYVKNREVGFARELFDFMP-------ERDIFTWNS 259
A +VF P+ D+V+WNS+I G+ N E A F+ M E + T +
Sbjct: 217 GGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIA 276
Query: 260 MISGYVDVGDMEAANGLFD--------LMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
++ ++G +E ++ + + L+ +DVV ++D +A+ GN+ AR FD +
Sbjct: 277 LLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGV 336
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRM------IRGDAKPNEASLMSVLTACANMG 365
+NVV W+ ++A Y + E LRLF +M + + KPN +L+SV+ AC+ +G
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE--KNVVSWNSM 423
IH Y + D ++++L+ M AKCG ++ R VF M E + VVSW+SM
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSM 456
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
I G+HG+G++ALE+F EM G PN+ T+I VLSAC+HAG+V +G F+ M++ Y
Sbjct: 457 IGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYG 516
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+ P +HY C+VDLLGRAG + ++ ++ +P++A ALWG+LL+AC H N +LG+IV
Sbjct: 517 MSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVE 576
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ ++ L+ G +VLL+N+Y G+WD+V +R ++ L K G S + G
Sbjct: 577 KKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIG 630
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 185/388 (47%), Gaps = 41/388 (10%)
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I D F N+++ N P AL+F+ +M A V N++TFP L K CA +R L
Sbjct: 13 ISHKDTFHWNSLIAKNATQN-PQTALTFF-TRMQAHAVPSNNFTFPALLKACAALRRLLP 70
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP--VWDLVTWNSMIDGY 233
+VHA + + G D F +L+ Y CG A +VF++ P D+V+W ++I Y
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130
Query: 234 VKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDM-------------------EAAN 274
N V A F M R + W+ VDV + A +
Sbjct: 131 SSNGCVDEAFXAFGRM--RWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188
Query: 275 GLFDLMPFRDVVSW-NCMIDGYAKIGNVTSARNCFDRMCM--RNVVSWNILLALYVRCKD 331
GL F N M+ Y+ +V A F+ + + R+VVSWN L++ + +
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGE 248
Query: 332 YCECLRLFDRMIR---GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR----IKP 384
LR F+ M+ +PN +++++L +CA +G ++ W+H YI +
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308
Query: 385 DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEME 444
DV++ T+LL M+A+CG + LAR +FD + KNVV W++MI GY E+AL +F +M
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQML 368
Query: 445 KRGP------TPNDATFICVLSACTHAG 466
G PN T + V++AC+ G
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLG 396
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 255/457 (55%), Gaps = 9/457 (1%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ +M V N YT+ L C + +L +GK H +VK G EL + SL+ MY
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSM 260
CG++ +AR+VF + DLV W +MI GY N V A LF M +I T S+
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 261 ISGYVDVGDME---AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+SG + ++E + +GL + D N ++ YAK A+ F+ +++V
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIV 409
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
+WN +++ + + E L LF RM PN ++ S+ +ACA++G + +G +H+Y
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 378 QKCRI--KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
K V + T+LL YAKCG AR +FD + EKN ++W++MI GYG G
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIG 529
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
+LE+F EM K+ PN++TF +LSAC H GMV EG YF M + Y P +HY CMV
Sbjct: 530 SLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMV 589
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L RAG + + +++ K+P++ +GA L C HS +LG+IV + +++L P D
Sbjct: 590 DMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDAS 649
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
YVL+SN+YAS+G+W++ + +R +MK++ L K G S
Sbjct: 650 YYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 221/482 (45%), Gaps = 14/482 (2%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P L C+ + Q H L +GL D A++++ L + L FD I
Sbjct: 44 SSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVS-LYGFFGYTKDARLVFDQI 102
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
EPD ++ +++ + + + + Y + +M ++ F K C ++ L G
Sbjct: 103 PEPDFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
KK+H ++VK D V L+ MY+ CGE+ A KVF D + ++V W SMI GYVKN
Sbjct: 162 KKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 237 REVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
LF+ M E ++ +T+ ++I + + + + +C++
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 293 ----DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
D Y K G++++AR F+ ++V W ++ Y E L LF +M + K
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN ++ SVL+ C + +++G+ +H K I D ++ +L+ MYAKC A+ V
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYV 399
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ +EK++V+WNS+I G+ +G +AL +F M TPN T + SAC G +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYG-CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
G ++ + H G ++D + G + S L+ E W A++
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ-SARLIFDTIEEKNTITWSAMI 518
Query: 528 SA 529
Sbjct: 519 GG 520
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 299/562 (53%), Gaps = 12/562 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H ++ G +++ L L + L + + FD ++ D N+++ ++
Sbjct: 215 QVHAMVVKHGF-EEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ KM V+ H TF + K CA +R L K + + +K GF D V
Sbjct: 274 GQDLEVFEIF-NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332
Query: 195 RNSLIHMYSVCGEVLDARKVF---EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+L+ S C E+ DA +F E+G ++V+W +MI G ++N A LF M
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGK--NVVSWTAMISGCLQNGGNDQAVNLFSQMRR 390
Query: 252 RDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
+ FT++++++ + V E + R ++D Y K+GN A
Sbjct: 391 EGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKV 450
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN-MGV 366
F+ + +++++W+ +LA Y + + E +LF ++I+ KPNE + SV+ ACA+
Sbjct: 451 FEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAA 510
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ G+ H+Y K R+ + +S++L+TMYAK G +D A VF E+++VSWNSMI G
Sbjct: 511 AEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISG 570
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
Y HGQ +KALE+F EM+KR + TFI V++ACTHAG+V +G YF+ M + I P
Sbjct: 571 YSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINP 630
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
++HY CM+DL RAG++ + +++++P G +W LL A H N ELG++ A+ L
Sbjct: 631 TMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKL 690
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
+ L+P D YVLLSN+YA+ G W E N+R++M +++++K G S + +
Sbjct: 691 ISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAG 750
Query: 607 NCPPHRKCIVYSMLGEIGAQMK 628
+ +YS L E+ ++K
Sbjct: 751 DLTHPLSNQIYSKLSELSIRLK 772
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 165/318 (51%), Gaps = 23/318 (7%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T + +CAG + G++VH + VK G + V SL+ MY V D R+VF++
Sbjct: 95 TLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEM 154
Query: 219 PVWDLVTWNSMIDGYVKNREVGFARELF------DFMPERDIFTWNSMISGYVDVG---- 268
++V+W S++ GY N G+ ELF +P R +T +++I+ V+ G
Sbjct: 155 GERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNR--YTVSTVIAALVNEGVVGI 212
Query: 269 -----DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
M +G + +P +N +I Y+++G + AR+ FD+M +R+ V+WN ++
Sbjct: 213 GLQVHAMVVKHGFEEAIPV-----FNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMI 267
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
A YVR E +F++M KP + SV+ +CA++ + + + + K
Sbjct: 268 AGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFT 327
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFME 442
D ++ T+L+ +KC MD A ++F M E KNVVSW +MI G +G ++A+ +F +
Sbjct: 328 TDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQ 387
Query: 443 MEKRGPTPNDATFICVLS 460
M + G PN T+ +L+
Sbjct: 388 MRREGVKPNHFTYSAILT 405
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%)
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
++D Y K NV R FD M RNVVSW LLA Y Y LF +M PN
Sbjct: 134 LVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPN 193
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
++ +V+ A N GV+ IG +H+ + K + + + SL+++Y++ G++ AR+VFD
Sbjct: 194 RYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFD 253
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
M ++ V+WNSMI GY +GQ + E+F +M+ G P TF V+ +C
Sbjct: 254 KMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC 305
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 7/217 (3%)
Query: 304 ARNCFDRMCMR--NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
A N FD++ R + N LL Y R K E L LF ++ +P+E++L V C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 362 ANMGVID--IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
A G +D +G+ +H K + V + TSL+ MY K ++ R VFD M E+NVVS
Sbjct: 104 A--GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVS 161
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W S++ GY +G E+F +M+ G PN T V++A + G+V G ++
Sbjct: 162 WTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVV 221
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+ + E + + ++ L R G++RD+ ++ K+ +
Sbjct: 222 K-HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI 257
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 308/554 (55%), Gaps = 21/554 (3%)
Query: 57 SHPILQK--LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
+ P+L L++C+ V F+ QIH ++ SGL D F + +L + +
Sbjct: 57 AKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRK 116
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FDG+ D +++ ++ + P +L ++ KM+A VE N +T + K C+ +
Sbjct: 117 VFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW-KMLAYGVEPNAFTLSAVIKACSELG 175
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L+ G+ H ++ GF+ + + ++LI M+ + DAR++F++ D + W S+I
Sbjct: 176 DLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIIS 235
Query: 232 GYVKNREVGFARELFDFMPER-----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR--- 283
+N A F M D FT+ ++++ ++G ++ + +
Sbjct: 236 ALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFC 295
Query: 284 -DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
+VV + ++D Y K G+V ++ FDRM ++N VSW+ LL Y + D+ +++F +M
Sbjct: 296 GNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM 355
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGV 401
K + ++L CA + + G+ +H YI+K + DV++ ++L+ +YAKCG
Sbjct: 356 ----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWR-DVIVESALVDLYAKCGC 410
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
++ A+ +FD M +N+++WNSMI G+ +G+GE+AL +F +M K G P+ +FI +L A
Sbjct: 411 IEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFA 470
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
C+H G+V EG YF M + Y I+ +EHY CMVDLLGRAGL+ ++E L+ +
Sbjct: 471 CSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSS 530
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
LW ALL AC+T +N E+ + +A+ +MELEP YVLL+N+Y + G+W++ +RR+MK
Sbjct: 531 LWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMK 590
Query: 582 EKELEKAVGSSLVH 595
++ + K G S +
Sbjct: 591 DRGVNKMPGKSWIE 604
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L+L + G+ S+L C + + G IH+++ K ++ D + SLLT+
Sbjct: 44 LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 103
Query: 396 YAKCGV-MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
Y K G R VFD + K+V+SW SMI GY G+ +LE+F +M G PN T
Sbjct: 104 YFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 163
Query: 455 FICVLSACTHAGMVLEGWWYFD-LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
V+ AC+ G + G + ++ R + + ++D+ GR + D+ +L +
Sbjct: 164 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIAS--ALIDMHGRNCALDDARQLFDE 221
Query: 514 LPMEAGPALWGALLSACS 531
L +E W +++SA +
Sbjct: 222 L-LEPDAICWTSIISALT 238
>gi|449451962|ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 293/562 (52%), Gaps = 14/562 (2%)
Query: 44 TDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL 103
+ + N I +L LESC+ + QIH ++ + L D F S++L +++
Sbjct: 15 SSSKNLYFAISSDQAKLLSLLESCNGTSKISQIHCYMVKTALDLDPFTLSKLL---ASAI 71
Query: 104 SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLL 163
+ + F I+ P+ FM NT+++ + ND A + + F+ + ++F
Sbjct: 72 LDIKYAASIFREIRNPNLFMFNTMLRGYSNSNDSKQAFVIFNDLRNQDFLP-DRFSFITT 130
Query: 164 GKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED-GPVWD 222
K CA ++ GK +H + K G L V N L+H Y C ++ DA K+F++ D
Sbjct: 131 LKACARELAIHVGKGIHGIVHKSGHGLFNDVNNILLHFYGACEQIKDAHKLFDEISQRND 190
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLF- 277
LV+WN+++DGY++ + + F M R + T S+ S DVG+ L+
Sbjct: 191 LVSWNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYG 250
Query: 278 ---DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
L ++ C+ID Y K G++ A F+ + ++V+ WN L+ Y + +
Sbjct: 251 HCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLIKK 310
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
+ M KPN ++L +++ACA G + G+++ +Y + DV+L T+L+
Sbjct: 311 AVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLANYADNEGLDLDVVLGTTLIG 370
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAK G +D A ++FD M K+V +W +MI GYG HGQ K +E ME+ G PN+ T
Sbjct: 371 MYAKFGFLDKAIDIFDKMKNKDVKTWTAMITGYGDHGQTRKVMETLYRMEEEGFRPNEIT 430
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
F+ VL+A +H G+V EG F M Y I PK+EHYGC++DLLGRAGL+ ++ +L+ L
Sbjct: 431 FLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLLGRAGLLEEAHKLIKSL 490
Query: 515 PMEAGPAL-WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
P G W LL+AC + + ELG+ V + L++L P +LLS+ YA G+ +
Sbjct: 491 PSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADSMLLSSTYAIAGRLSDY 550
Query: 574 ENLRRIMKEKELEKAVGSSLVH 595
+ + ++++A GSS V
Sbjct: 551 TQYQLRKEGNKVKEANGSSQVQ 572
>gi|242059647|ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
gi|241930944|gb|EES04089.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
Length = 530
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 251/438 (57%), Gaps = 1/438 (0%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHA-RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKV 214
+H+T P A +R L G +HA L L V N+L+ +Y+ C E A
Sbjct: 81 DHFTLPFALNAAASLRLLPLGASLHAVAFRLGLLPLRLPVANALVDLYAKCEEFSAAHAA 140
Query: 215 FEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
D P D V++NS++ + +N V A LF M R +WN+M+ YV GD+ +A
Sbjct: 141 LADIPAPDAVSFNSLLCAHARNASVRPAESLFAAMRSRTQVSWNAMVVLYVSAGDLVSAR 200
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
+FD MP RD SW+ +I GY K G V +AR FD+M +N+V+ ++ Y +
Sbjct: 201 RVFDEMPTRDTASWSVLIAGYCKGGLVQNARELFDKMPSKNLVARTAMINGYAQTGQPKA 260
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L LF + +P+ A+++ V++A + +G ++ W+ +Y+ + +I+ +V + T+L+
Sbjct: 261 ALALFRDLEAAGIEPDGATMVGVISAVSQIGSTELAGWVGAYVDRKKIERNVKVLTALVD 320
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
M+AKCG ++ A + F + + + + ++I G HG + AL +F M+ + P+ T
Sbjct: 321 MHAKCGNIEQALSAFREIPQPDAYPYTALISGLATHGHEKLALSVFERMQVQAVKPDPIT 380
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
F+ VL+AC+H G+V +G Y++ M R Y I + +HY C++D+LGRAG + ++ E+V +
Sbjct: 381 FVGVLTACSHTGLVDKGLEYWEAMVRDYGIVRRADHYACVIDMLGRAGRIEEAFEMVQTM 440
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
PM P GALLSAC T+ N E+ +IVA L ELEP + G Y+LLSNIYA + W+E E
Sbjct: 441 PMGPHPGALGALLSACKTYENVEIAEIVANKLFELEPWNTGNYILLSNIYAGKELWEEAE 500
Query: 575 NLRRIMKEKELEKAVGSS 592
+R +M+ K K GS+
Sbjct: 501 RVRSLMRTKLPFKNPGST 518
>gi|357156964|ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 710
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 288/530 (54%), Gaps = 13/530 (2%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH + +V G++ + A+ +L + S++ + FD D +M NT+++ +
Sbjct: 171 IHARAVVLGIATNPAFATSLLA--VAAPCSLAYARRVFDAAPHRDVYMWNTLLRVHAHSH 228
Query: 136 -DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+P + Y++M A V +HYT+P++ CA R+ R G+ H V+ D FV
Sbjct: 229 AEPQSSALSLYKRMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALAGDCFV 288
Query: 195 RNSLIHMYSVCGEVLDARKVF--EDGPVWDLVTWNSMIDGYVKNREVGFARELFD----- 247
++LI MY G+V DA +VF G +V+W +M+ GYV+N G A +F
Sbjct: 289 HSALIAMYCQDGDVADAEQVFLGTAGASRTVVSWTAMVAGYVQNCFFGEAIAVFGAVVAE 348
Query: 248 -FMP-ERDIFTWNSMISGYVDVGDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
+P E + ++ + G + E +G + F +V N ++ Y K G+V SA
Sbjct: 349 GVLPNEITLISFLPCLQGQEWLTAGEMVHGFALKLRFDANVPLLNALVAMYGKCGSVLSA 408
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
+ FD M R +VSWN ++A+Y + D + ++ F RM+ + +L+SVL+ACA
Sbjct: 409 KGLFDGMATRTLVSWNTMVAMYEQNSDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARS 468
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G ++ G+W+H + + D + L+ MYAKCG + AR VFD++ E VVSW++MI
Sbjct: 469 GALETGKWVHELARSHGLDNDARIGNVLVDMYAKCGEIAYAREVFDSLREPGVVSWSAMI 528
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
Y HG+ ++AL++F M+ G PN T VL AC H+G+V EG +F+ + Y++
Sbjct: 529 SAYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLVACGHSGLVDEGLKHFNSIAMEYQM 588
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
P +EHY CM+D+LGRAG + ++ E++ + ++ +WGA L C H N EL + VA
Sbjct: 589 SPTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDKCVWGAFLGGCRLHCNLELAEFVAN 648
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L + D YVL++N+Y G ++ E +RR MKE EL+K G S V
Sbjct: 649 DLFQSGSNDVTFYVLMANMYFEAGMLEDAERMRRAMKEMELKKTAGHSSV 698
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 290/559 (51%), Gaps = 72/559 (12%)
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLI------- 199
K++ V+ N TF + + CA + G V IVK G+E DL V NSLI
Sbjct: 174 KLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMG 233
Query: 200 ------------------------HMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
+Y E+ +AR++F++ P + V+W++MI Y +
Sbjct: 234 EIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQ 293
Query: 236 NREVGFARELF------DFMP---------------------------------ERDIFT 256
+ + LF F P E+D+F
Sbjct: 294 SGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFV 353
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
+S+I Y G+ + LFD + +++VSWN M+ GY+ G++ A+ F+ M +RN
Sbjct: 354 SSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNN 413
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSW+ ++A ++ C+ + E +F+ MI PN+++ S+L ACA+ +D G+ +H
Sbjct: 414 VSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGK 473
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
I K I+ D + T+L MYAK G ++ ++ VF+ M +KN VSW +MI G G E++
Sbjct: 474 IVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEES 533
Query: 437 LEMFMEMEKRGP-TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
L +F EMEK PN+ F+ VL AC+H+G+V +G WYF+ M+ +Y ++PK H+ C+V
Sbjct: 534 LTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVV 593
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L RAG + ++EE + +P + W ALLS C T+ N EL + VA L E+ ++
Sbjct: 594 DMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCA 653
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCI 615
YVLLSNIYAS G+W +V +R++MK K L+K+ G S V + E+ +
Sbjct: 654 GYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAE 713
Query: 616 VYSMLGEIGAQMKMCRRDV 634
+Y +L +G +MK C ++V
Sbjct: 714 IYEILELLGYEMK-CFKEV 731
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 181/406 (44%), Gaps = 78/406 (19%)
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+R+G +HA + K G + ++ L+ MY + +A ++ +D +DLV N MI
Sbjct: 37 IRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISA 96
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
V+ + AR+LFD MP+ + +W ++ISG++ G + + F+ PF++VVSW I
Sbjct: 97 NVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAI 156
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
GY + N F E ++LF +++ + KPN+
Sbjct: 157 SGYVQ--------NGFS-----------------------VEAMKLFIKLLESEVKPNKV 185
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ SV+ ACAN+G +G + I K + D+ +S SL+T+ + G + LAR VFD M
Sbjct: 186 TFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRM 245
Query: 413 TEKNV-------------------------------VSWNSMIMGYGMHGQGEKALEMFM 441
EK+V VSW++MI Y G E++L +F
Sbjct: 246 EEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFC 305
Query: 442 EMEKRGPTPNDATFICVLSACT-----HAGMVLEGWWYFDLMQRIYKI--EPKVEHYGCM 494
M + G PN + F +LSA AGM + G + KI E V +
Sbjct: 306 RMIQEGFKPNISCFSSILSALASVEALQAGMNIHG--------HVTKIGFEKDVFVSSSL 357
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
+D+ + G +D L + +E W A++ S + + E K
Sbjct: 358 IDMYCKCGETKDGRFLFDTI-LEKNMVSWNAMVGGYSLNGHMEEAK 402
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 47/263 (17%)
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY------------------ 396
+S+L N G+I G +H+++ K I + +S LL MY
Sbjct: 25 VSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDG 84
Query: 397 -------------AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
+ G +D AR +FD M + N +SW ++I G+ +G+ +++ F
Sbjct: 85 FDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYF--- 141
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYF-DLMQRIYKIEPKVEHYGCMVDL---LG 499
+R P N ++ +S G +E F L++ +++P + +V LG
Sbjct: 142 -ERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLES--EVKPNKVTFTSVVRACANLG 198
Query: 500 RAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVL 559
GL L+ K E A+ +L++ C L + V +E +D +
Sbjct: 199 DFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDR---MEEKDVVSWTA 255
Query: 560 LSNIYASEGKWDEVENLRRIMKE 582
+ ++Y + DE+ RRI E
Sbjct: 256 ILDLYV---EMDELGEARRIFDE 275
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 288/535 (53%), Gaps = 15/535 (2%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
++E ++H L+++G D L ++ S+ + F+G++ D F ++I+
Sbjct: 25 ALEEGRRLHEHLIITGFRTD-IPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSII 83
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
++ A+ Y +M+A+ VE N TF CA + L +G+ +H RI+
Sbjct: 84 SAYARAGRGEMAVVLY-RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKV 142
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
D +++SL++MY C E+++ARKVFE ++ ++ +MI YV+ E A ELF
Sbjct: 143 PQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSR 202
Query: 249 MP-----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNCMIDGYAKIG 299
M E + +T+ +++ +G++E + + R +VV N ++ Y K G
Sbjct: 203 MSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCG 262
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ AR FD M RNV+SW ++A Y + + E L LF RM D +P+ S S L
Sbjct: 263 SPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALN 319
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA +G +D G+ IH + + + + TSLL+MYA+CG +D AR VF+ M ++ S
Sbjct: 320 ACALLGALDEGREIHHRVVEAHLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDAFS 378
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
N+MI + HG+ ++AL ++ ME+ G + TF+ VL AC+H +V + +F +
Sbjct: 379 CNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLV 438
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ + P VEHY CMVD+LGR+G + D+EELV +P + W LLS C H + G
Sbjct: 439 MDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRG 498
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A+ + EL P + PYV LSN+YA+ ++D+ +R+ M+E+ + V S +
Sbjct: 499 ERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVSYI 553
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 186/359 (51%), Gaps = 16/359 (4%)
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C +++L EG+++H ++ GF D+ + +L+ MY+ CG + DA++VFE + DL
Sbjct: 19 ACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFA 78
Query: 226 WNSMIDGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANG-----L 276
W+S+I Y + A L+ M E ++ T+ + G V + L
Sbjct: 79 WSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRIL 138
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
+P DV+ + +++ Y K + AR F+ M RNV S+ +++ YV+ ++ E L
Sbjct: 139 ASKVPQDDVLQ-DSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEAL 197
Query: 337 RLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
LF RM + +A +PN + ++L A +G ++ G+ +H ++ +V++ +L+TM
Sbjct: 198 ELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTM 257
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y KCG AR VFD+MT +NV+SW SMI Y HG ++AL +F M+ P+ +F
Sbjct: 258 YGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSF 314
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
L+AC G + EG + + P++E ++ + R G + D+ + +++
Sbjct: 315 SSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMYARCGSLDDARRVFNRM 371
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+ S++ AC + ++ G+ +H ++ + D+ L T+LL MYAKCG +D A+ VF+ M
Sbjct: 13 VTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGME 72
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG-- 471
K++ +W+S+I Y G+GE A+ ++ M G PN TF C L C + +G
Sbjct: 73 IKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRA 132
Query: 472 -----------------------WWYFDLMQRIYKI-----EPKVEHYGCMVDLLGRAGL 503
+ D M K+ V Y M+ +AG
Sbjct: 133 IHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGE 192
Query: 504 MRDSEELVSKL----PMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
++ EL S++ +E + +L A N E G+ V +HL
Sbjct: 193 HAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 254/459 (55%), Gaps = 14/459 (3%)
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGE 207
M+ N +TFP K CA + GK++H + K G L+ FV+ SLI MY C
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 208 VLDARKVFEDGPVWDLVT--WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
+ +ARK+F++ P +T +NS++ GY N V LF M E + + G V
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 266 DVGDMEAANGL----------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+ GL F L D NC++ Y K G + R FD M +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLD--MDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKG 178
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
+++WN ++ Y + L L+ M P+ +L+ VL++CA++G + +G+ +
Sbjct: 179 LITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
++ + L+ +L+ MYA+CG + AR++FD M K+VVSW ++I GYGMHGQGE
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A+ +F EM + G P+ F+ VLSAC+HAG+ +G YF +M+R Y + P EHY CMV
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
DLLGRAG + ++ EL+ + + A ALWGALL AC H N EL ++ + ++ELEP + G
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTG 418
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+Y G + + +R +M++++L+K G S V
Sbjct: 419 YYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYV 457
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 195/428 (45%), Gaps = 26/428 (6%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H + +G + F + ++ + LF + Q +C + S L
Sbjct: 31 QLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYAL 90
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N + + +M VE N T L + C +L G VH VK G ++D V
Sbjct: 91 NSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSV 150
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER-- 252
N L+ MY GE+ RK+F++ P L+TWN+MI+GY +N EL+ M +
Sbjct: 151 GNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGF 210
Query: 253 --DIFTWNSMISGYVDVGDMEAANGL--------FDLMPFRDVVSWNCMIDGYAKIGNVT 302
D T ++S +G + + F PF + N +++ YA+ GN+
Sbjct: 211 CPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLN----NALVNMYARCGNLK 266
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR+ FD M +++VVSW ++ Y + LFD MIRG KP+ + +SVL+AC+
Sbjct: 267 KARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACS 326
Query: 363 NMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSW 420
+ G+ + G + +K ++P + ++ + + G ++ AR + ++M + W
Sbjct: 327 HAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALW 386
Query: 421 NSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDL 477
+++ +H E A E +E+E PT N ++ + + T AG LEG +
Sbjct: 387 GALLGACKIHRNVELAELAFEQVIELE---PT-NTGYYVLLSNVYTEAGN-LEGILRVRM 441
Query: 478 MQRIYKIE 485
+ R K++
Sbjct: 442 LMRKRKLK 449
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 303/541 (56%), Gaps = 17/541 (3%)
Query: 102 SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
SL+ + + FD ++E + ++ A+ + E +++ + +T
Sbjct: 207 SLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLT 266
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
L VCA I+ L GK++H+ +++ G LDL V SL+ MY+ CG V +ARKVF+
Sbjct: 267 GLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREH 326
Query: 222 DLVTWNSMIDGYVKNREVGFARE---LFDFMPER-----DIFTWNSMISGYVDVGDMEAA 273
++++W ++++GYV+ G+ RE +F M + + FT++ ++ + D +
Sbjct: 327 NVMSWTALVNGYVRGGG-GYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG 385
Query: 274 NGLFDLMPFRDVVSWNCMIDG----YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+ + + +C+ +G YAK G + SAR CFD + +N+VS ++ V
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNV-- 443
Query: 330 KDY-CECLRLFDRMIRG-DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
KD+ + DR + + + + S+L+ A +G I G+ IH+ + K + D+
Sbjct: 444 KDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS 503
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
++ +L++MY+KCG + A VF++M + NV++W S+I G+ HG KALE+F M + G
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETG 563
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PND T+I VLSAC+H G++ E W +F M+ + I P++EHY CMVDLLGR+GL+ ++
Sbjct: 564 VKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEA 623
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
E ++ +P +A +W L +C H N++LG+ A+ ++E EP DP Y+LLSN+YA+E
Sbjct: 624 IEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATE 683
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
G+W++V +R+ MK+K++ K GSS + + V + + +Y L E+ ++
Sbjct: 684 GRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKI 743
Query: 628 K 628
K
Sbjct: 744 K 744
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 165/323 (51%), Gaps = 19/323 (5%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-- 216
T LL K C ++ GK +H ++ LD + NSLI +YS + + A +F+
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD-----IFTWNSMISGYVDVGDME 271
+ D+V+++S+I + NR A E+FD + +D + + ++I + G +
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 272 AANGLFDLM----PFRDVVSWNC-MIDGYAK---IGNVTSARNCFDRMCMRNVVSWNILL 323
LF + F V C +ID + K + ++ SAR FD+M +NVV+W +++
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAK-PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
+ E + LF M+ P+ +L +++ CA + + +G+ +HS++ + +
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY--GMHGQGEKALEMF 440
D+ + SL+ MYAKCG++ AR VFD M E NV+SW +++ GY G G +A+ MF
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353
Query: 441 MEM-EKRGPTPNDATFICVLSAC 462
M + G PN TF VL AC
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKAC 376
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM--TE 414
+L C +G+ +H + + D LL SL+T+Y+K A ++F +M ++
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEME-KRGPTPNDATFICVLSACTHAGMVLEGWW 473
++VVS++S+I + + KA+EMF ++ + G PN+ F V+ AC G G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 474 YFDLMQRIYKIEPKVEHYGC-MVDLLGRAGLMRDSE 508
F + + + V GC ++D+ + + D E
Sbjct: 178 LFGFVLKTGYFDSHV-CVGCELIDMFVKGCSLADLE 212
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 239/381 (62%), Gaps = 3/381 (0%)
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E D F ++I+ Y +G + A +FD M RDV WN MI GY + G++ +A FD
Sbjct: 114 ESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDI 369
M +NV SW +++ + + +Y E L +F M + + KPN +L+SVL ACAN+G ++I
Sbjct: 174 MPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEI 233
Query: 370 GQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYG 428
G+ + Y ++ ++ + + L MY+KCG++D+A+ +FD + ++N++SWNSMI
Sbjct: 234 GRRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLA 293
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HG+ ++ALE++ +M + G P+ TF+ +L AC H GMVL+G M+ ++KI PK+
Sbjct: 294 THGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKL 353
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHYGCM+DLLGR G ++++ +L+ +PM+ +WG LL ACS H N E+ +I ++ LM+
Sbjct: 354 EHYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMK 413
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGEFASESIVEN 607
LEP +PG V++SNIYA+ KWD V +R++MK++ + KA G S V G + VE+
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTVED 473
Query: 608 CPPHRKCIVYSMLGEIGAQMK 628
R +Y +L EI +MK
Sbjct: 474 KSHPRSYEIYQVLDEISRRMK 494
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 193/425 (45%), Gaps = 52/425 (12%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ + Q+H L +G+ + R+L + ++ + FD + P F+ N +++
Sbjct: 1 MNQIKQLHAHCLRTGVDETKDLLQRLL-----LIPNLVYARKLFDLHRNPCIFLYNKLIQ 55
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
S+ + + P ++ Y + + NH+TF + A S R + +H++ + GFE
Sbjct: 56 SYSVHHQPHESIVLY-NLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
D F +LI Y+ G + AR+VF++ D+ WN+MI GY + ++ A ELFD M
Sbjct: 115 SDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 250 PERDIFTWNSMISGYVDVGDMEAANGLF-----------------DLMP----------- 281
P +++ +W ++ISG+ G+ A +F ++P
Sbjct: 175 PNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIG 234
Query: 282 ------------FRDVVSWNCMIDGYAKIGNVTSARNCFDRMC-MRNVVSWNILLALYVR 328
F ++ N ++ Y+K G + A+ FD + RN++SWN ++
Sbjct: 235 RRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLAT 294
Query: 329 CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC-RIKPDVL 387
+ E L L+ +M++ +P+ + + +L AC + G++ G+ + +++ +I P +
Sbjct: 295 HGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLE 354
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKALEMFMEM 443
++ + + G + A ++ M K + V W +++ HG E A E M++
Sbjct: 355 HYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKL 414
Query: 444 EKRGP 448
E P
Sbjct: 415 EPTNP 419
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 300/543 (55%), Gaps = 17/543 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L C + +IH ++ +G ++ + + +++ + + S+ + FDG++ D+
Sbjct: 77 LRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQ-MYSKCGSLEDAKKVFDGMRRRDSIS 135
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA--GIRSLREGKKVHA 181
+ ++ ++ A+ Y K MA ++ + +TF + C+ G R+L GK++HA
Sbjct: 136 WSKMIAGYVRHGLAREAIKLY--KAMA--IDPDGFTFSAVLNACSSLGPRALEVGKEIHA 191
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+ + + D+FV ++L+ M++ CG + ++R+VF+D D++ WNSMI Y ++
Sbjct: 192 HMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPRE 251
Query: 242 ARELFDFMP------ERDIFTWNSMISGYVDVGDMEAANGLFDLM---PFR-DVVSWNCM 291
A ELF M E + T+ ++++ V D+E + M F+ D + N +
Sbjct: 252 AIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSL 311
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
++ YAK G++T AR FD M R VVSW +++ YVR E L L+ +M +PN
Sbjct: 312 VNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNG 371
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ SVL+AC+++G ++ G+ +H+ ++ KPD+ ++ +L+++Y KCG +D AR VFD
Sbjct: 372 ITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDR 431
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
M +NVVSW +MI Y H E+A++++ M+ G + + VL+AC+ AG++
Sbjct: 432 MKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESA 491
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
YF + R K+E Y CM +LGRAG + ++EEL++ +P EA W LL+AC
Sbjct: 492 RHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACK 551
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
H++ E G VA+ L LEP + PYVLLSNIY + G+ +E +RR M + G
Sbjct: 552 AHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKMGDVIAAAGSGE 611
Query: 592 SLV 594
S++
Sbjct: 612 SII 614
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 198/391 (50%), Gaps = 21/391 (5%)
Query: 161 PLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV 220
P G + L GKK+H +VK G+ +++V N L+ MYS CG + DA+KVF+
Sbjct: 71 PAYGNLLRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRR 130
Query: 221 WDLVTWNSMIDGYVKNREVGFARE---LFDFMP-ERDIFTWNSMISGYVDVG-------- 268
D ++W+ MI GYV++ G ARE L+ M + D FT++++++ +G
Sbjct: 131 RDSISWSKMIAGYVRH---GLAREAIKLYKAMAIDPDGFTFSAVLNACSSLGPRALEVGK 187
Query: 269 DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
++ A L P DV + ++ +AK G++ +R FD ++V+ WN ++ Y +
Sbjct: 188 EIHAHMKRIWLKP--DVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQ 245
Query: 329 CKDYCECLRLFDRMIRGD--AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
E + LF M +PN + +VL AC+ + ++ G+ +H + + D
Sbjct: 246 SGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDA 305
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
SL+ MYAKCG + AR VFD M ++ VVSW +I Y G +AL+++ +M
Sbjct: 306 AAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSE 365
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
G PN TF VLSAC+ G + EG M + +P + +V L G+ G +
Sbjct: 366 GVEPNGITFASVLSACSSLGALEEGKAVHAQM-KAAGYKPDLAVANALVSLYGKCGSVDS 424
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ ++ ++ + W A++SA + H +SE
Sbjct: 425 ARKVFDRMKIR-NVVSWTAMISAYAHHRHSE 454
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 294/538 (54%), Gaps = 19/538 (3%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK 129
+ E H ++ GL D + + L L V + FDG+ D N ++
Sbjct: 123 LDEGRAAHGMVIKLGLEHDVYTCNS-LVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVD 181
Query: 130 SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV--CAGIRSLREGKKVHARIVKCG 187
++ ++ G+L+ + M +E H + ++ + C S +GK++H +++ G
Sbjct: 182 GYV--SNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHG 239
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
E D+ V SL+ MY CGEV AR VF P+ +VTWN MI GY N E FD
Sbjct: 240 LEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER---PDEAFD 296
Query: 248 -FMPER------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRD----VVSWNCMIDGYA 296
FM R ++ T ++++ + + R VV +++ Y
Sbjct: 297 CFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYG 356
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K+G V S+ F ++ + +VSWN ++A Y+ + Y E + LF ++ P+ ++ +
Sbjct: 357 KVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMST 416
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
V+ A +G + + IHSYI + L+ ++L MYA+ G + +R +FD M K+
Sbjct: 417 VVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKD 476
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
V+SWN+MIMGY +HGQG+ ALEMF EM+ G PN++TF+ VL+AC+ +G+V EGW +F+
Sbjct: 477 VISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFN 536
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
LM + Y + P++EHYGCM DLLGR G +R+ + + +P++ +WG+LL+A ++
Sbjct: 537 LMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDI 596
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
++ + A+ + +LE + G Y++LS++YA G+W++VE +R +MKEK L + SLV
Sbjct: 597 DIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLV 654
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 179/408 (43%), Gaps = 75/408 (18%)
Query: 97 KKLCTSLSS---VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
K L SL++ + +V ++ PDAF+ N +++ F P Y M+
Sbjct: 45 KSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPA-GALAAYRGMLEDGA 103
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ +TFP++ K CA + L EG+ H ++K G E D++ NSL+ Y+ G V DA +
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----------------------- 250
VF+ PV D+VTWN M+DGYV N A F M
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223
Query: 251 -----------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
E+DI S++ Y G++ A +F MP R VV+WNCMI
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
GYA A +CF M MR E L++ +
Sbjct: 284 GYALNERPDEAFDCF--MQMR------------------AEGLQV-----------EVVT 312
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+++L ACA G+ +H Y+ + + P V+L T+LL MY K G ++ + +F +
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
K +VSWN+MI Y +A+ +F+E+ + P+ T V+ A
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPA 420
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M+ A+P+ + V+ CA +G +D G+ H + K ++ DV SL+ YAK G+
Sbjct: 98 MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT-FICVLS 460
++ A VFD M +++V+WN M+ GY +G G AL F EM +D+ I L+
Sbjct: 158 VEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA 217
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
AC ++G + R + +E ++ ++D+ + G + + + + +P+
Sbjct: 218 ACCLEFSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 227/353 (64%), Gaps = 1/353 (0%)
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+ F F D+F N++I Y + A +F+ +DVVS+N +I G+ K+G+
Sbjct: 154 QAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALIGGFIKVGDTDR 213
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYC-ECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR FD+M +R+ VSW LLA Y + D C + ++LF+RM+ +P+ +L+S L+ACA
Sbjct: 214 ARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPDNIALVSALSACA 273
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G ++ G+ IH YI++ RI + LST L+ +YAKCG ++ AR +F++ +KN+ +WN+
Sbjct: 274 QLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETAREIFESSPDKNLFTWNA 333
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+++G GMHG+G +L F M + G P+ +F+ +L C HAG+V E +F M+ +Y
Sbjct: 334 LLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEARNFFQEMEVVY 393
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
++ +++HYGCM DLLGRAGL+R++ E++ ++PM +WG +L C H N E+ +
Sbjct: 394 RVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGCRIHGNVEIAEKA 453
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
A+++M L P D G Y ++++IYA+ G+W++V +RR+M ++++K G SLV
Sbjct: 454 AENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVKKNPGCSLVQ 506
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 207/456 (45%), Gaps = 70/456 (15%)
Query: 53 IVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS---------- 102
IV+ S I + C ++K+ HQ+H + +GL +S +L + T+
Sbjct: 12 IVNTSEAI-TVIRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNA 70
Query: 103 -------LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH 155
L+ +LSV F+ I P F NT++++ +L+ P AL + +M V
Sbjct: 71 SPTTPAALTGYALSV--FNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFV-RMRRLSVPP 127
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
+ +TFP K C+ + +L + +H++ K GF DLFV N+LIH+YSV + A +VF
Sbjct: 128 DTHTFPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVF 187
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGD--MEAA 273
+ + D+V++N++I G++K + AR LFD MP RD +W ++++GY GD M+A
Sbjct: 188 NETSLKDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAI 247
Query: 274 NGLFDLMPFRDVVSWNC---------------------------------------MIDG 294
LF+ M V N ++D
Sbjct: 248 Q-LFNRMLISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDL 306
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILL-ALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
YAK G + +AR F+ +N+ +WN LL L + + + L F RMI KP+ S
Sbjct: 307 YAKCGCIETAREIFESSPDKNLFTWNALLVGLGMHGRGHLS-LHYFSRMIEAGIKPDGVS 365
Query: 354 LMSVLTACANMGVI-DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ +L C + G++ + + R+ ++ + + + G++ A + + M
Sbjct: 366 FLGILVGCGHAGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERM 425
Query: 413 -TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
+V W ++ G +HG EKA E M +
Sbjct: 426 PMGGDVFVWGGVLGGCRIHGNVEIAEKAAENVMALN 461
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/412 (37%), Positives = 249/412 (60%), Gaps = 8/412 (1%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFED---GPVW-DLVTWNSMIDGYVKNREVGFARE-- 244
+LFV N LI +S E A + +W D +T+ +I + V +
Sbjct: 83 NLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTH 142
Query: 245 --LFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
+ F + D++ NS++ Y + G + AA +F MPFRDVVSW M+ GY K G V
Sbjct: 143 SQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVE 202
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR FD M RN+ +W+I++ Y + + + + LF+ M R NE ++SV+++CA
Sbjct: 203 DAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCA 262
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
++G ++ G+ H Y+ K + +++L T+L+ MY +CG ++ A VF+ + +K+ +SW+S
Sbjct: 263 HLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSS 322
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I G +HG KA+ F +M + G +P D T VLSAC+H G+V +G ++ M+R Y
Sbjct: 323 IIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDY 382
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
IEP++EHYGC+VD+LGRAG + ++E + K+P++ + GALL AC + N+E+ + V
Sbjct: 383 GIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERV 442
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
L+E++P G YVLLSNIYA G+W+++E+LR IMKEK ++K G SL+
Sbjct: 443 GNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLI 494
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 51/417 (12%)
Query: 48 NQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK-KLCTSLSS- 105
N L + HP L L+SCS+ + IH LL + L D F ASR+L LC S+
Sbjct: 3 NIVLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTF 62
Query: 106 ------VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYT 159
+ + F IQ P+ F+ N +++ F +P A FY + + ++ N T
Sbjct: 63 HKPTNLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN-IT 121
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
FP L K + + G++ H++IV+ GF+ D++V NSL+HMY+ CG + A ++F P
Sbjct: 122 FPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMP 181
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
D+V+W SM+ GY K V ARE+FD MP R++FTW+ MI+GY E A LF+L
Sbjct: 182 FRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEL 241
Query: 280 MPFRDVVS---------------------------------------WNCMIDGYAKIGN 300
M VV+ ++D Y + G
Sbjct: 242 MKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGE 301
Query: 301 VTSARNCFDRMCMRNVVSW-NILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
+ A F+ + ++ +SW +I+ L V + + + F +M+R P + +L +VL+
Sbjct: 302 IEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAH-KAIHYFSQMVRLGFSPRDITLTAVLS 360
Query: 360 ACANMGVIDIGQWIHSYIQK-CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
AC++ G++D G I+ +++ I+P + ++ M + G + A N M K
Sbjct: 361 ACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVK 417
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 271/534 (50%), Gaps = 65/534 (12%)
Query: 51 LPIVDLSH-PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLS 109
L + L H P L + ++ E Q+H LL + S SRV +C SS S +
Sbjct: 8 LHVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRV-ASVCAFNSSFSYA 66
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
L F + + NT ++SF + P A+S +Y ++ + +HYT
Sbjct: 67 KLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFY-RLREFDISPDHYT---------- 115
Query: 170 IRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSM 229
C F L C +LD R +
Sbjct: 116 ----------------CSFVL------------KACSRLLDVRN-------------GKI 134
Query: 230 IDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN 289
+ GYV+ ++G + ++F N ++ Y G++ A +FD MP RDV++WN
Sbjct: 135 VHGYVE--KLGL---------QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
MI K+G+ A F M RNV SW ++ Y +C E + LF M P
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP 243
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
NE ++++VL ACA+MG + +G+ IH + + + ++ + +L+ MY KCG ++ A +F
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
DNM E+ VVSW++MI G HG+ E AL +F +M G PN TFI +L AC+H GMV
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+G YF M R Y I P++EHYGCMVDL RAGL++++ E + +P+ +WGALL
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
C H N +L + +HL +L+P + G YV+LSNIYA G+W++V +R++M+++
Sbjct: 424 CKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 290/603 (48%), Gaps = 75/603 (12%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+ ++E +IH +L GL D F+A+ L + + + +V F I PD
Sbjct: 190 LNACAGLQEGDLGRKIHGLMLKMGLDLDQFSAN-ALVDMYSKAGEIEGAVAVFQDIAHPD 248
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
N I+ +L+D ++M N +T K CA + G+++H
Sbjct: 249 VVSWNAIIAG-CVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLH 307
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ ++K DLF L+ MYS C + DAR+
Sbjct: 308 SSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRA-------------------------- 341
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM-------------------- 280
+D MP++DI WN++ISGY GD A LF M
Sbjct: 342 -----YDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVA 396
Query: 281 -------------------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ D N ++D Y K ++ A F+ ++V++
Sbjct: 397 SLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTS 456
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ Y + D E L+L+ +M D KP+ S+L ACAN+ + G+ +H + K
Sbjct: 457 MITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFG 516
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
D+ S SL+ MYAKCG ++ A F + + +VSW++MI GY HG G++AL +F
Sbjct: 517 FMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFN 576
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M + G PN T + VL AC HAG+V EG YF+ M+ ++ I+P EHY CM+DLLGR+
Sbjct: 577 QMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRS 636
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
G + ++ ELV+ +P EA +WGALL A H N ELG+ A+ L +LEP G +VLL+
Sbjct: 637 GKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLA 696
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLG 621
NIYAS G W+ V +R+ MK+ +++K G S + + IV + R +Y+ L
Sbjct: 697 NIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLD 756
Query: 622 EIG 624
++G
Sbjct: 757 QLG 759
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 165/319 (51%), Gaps = 12/319 (3%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
V+ N +TFP + K C+ R L G+KVH V GFE D FV N+L+ MY+ CG + D+R
Sbjct: 78 VKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSR 137
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDV----- 267
++F ++V+WN++ YV++ G A LF M I IS ++
Sbjct: 138 RLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQ 197
Query: 268 -GDM-EAANGLFDLMPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLA 324
GD+ +GL M D S N ++D Y+K G + A F + +VVSWN ++A
Sbjct: 198 EGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIA 257
Query: 325 LYV--RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRI 382
V C D L L D M +PN +L S L ACA MG ++G+ +HS + K
Sbjct: 258 GCVLHDCNDL--ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDA 315
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
D+ + L+ MY+KC +MD AR +D+M +K++++WN++I GY G A+ +F +
Sbjct: 316 HSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSK 375
Query: 443 MEKRGPTPNDATFICVLSA 461
M N T VL +
Sbjct: 376 MFSEDIDFNQTTLSTVLKS 394
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 17/369 (4%)
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++HA ++K GF D +RN L+ +YS C ARK+ ++ D+V+W+S++ GYV+N
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 238 EVGFARELFDFMPERDI----FTWNSMI---SGYVDVGDMEAANGLFDLMPFR-DVVSWN 289
V A +F+ M + FT+ S++ S D+ +G+ + F D N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++ YAK G + +R F + RNVVSWN L + YV+ + E + LF M+R P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
NE S+ +L ACA + D+G+ IH + K + D + +L+ MY+K G ++ A VF
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
++ +VVSWN++I G +H + AL + EM+ G PN T L AC G
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
G L + K++ + + +VD+ + +M D+ +P + A W AL+
Sbjct: 302 LGR---QLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA-WNALI 357
Query: 528 SA---CSTH 533
S C H
Sbjct: 358 SGYSQCGDH 366
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 19/258 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQ 117
+L+ + S +K QIHT + SG+ D + + +L C + S F+
Sbjct: 391 VLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEAS---KIFEERT 447
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
D +++ ++ D AL Y + M ++ + + L CA + + +GK
Sbjct: 448 WEDLVAYTSMITAYSQYGDGEEALKLYLQ-MQDADIKPDPFICSSLLNACANLSAYEQGK 506
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H +K GF D+F NSL++MY+ CG + DA + F + P +V+W++MI GY ++
Sbjct: 507 QLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHG 566
Query: 238 EVGFARELFDFMPERDI----FTWNSMI-----SGYVDVGD--MEAANGLFDLMPFRDVV 286
A LF+ M + T S++ +G V+ G E +F + P ++
Sbjct: 567 HGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQE-- 624
Query: 287 SWNCMIDGYAKIGNVTSA 304
+ CMID + G + A
Sbjct: 625 HYACMIDLLGRSGKLNEA 642
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 287/529 (54%), Gaps = 15/529 (2%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I EPD NT++ ++ + AL + M ++ + +T + C
Sbjct: 96 LFDQIPEPDLVSYNTLISAYADCGETAPALGLF-SGMREMGLDMDXFTLSAVITACCDDV 154
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED-GPVWDLVTWNSMI 230
L ++H+ V GF+ + V N+L+ Y G++ DA++VF G + D V+WNSMI
Sbjct: 155 GLI--GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 231 DGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAA----NGLFDLMPF 282
Y +++E A LF M R D+FT S+++ + + D+ L
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272
Query: 283 RDVVSWNCMIDGYAKIGN-VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE-CLRLFD 340
++ + +ID Y+K G ++ R F+ + ++V WN +++ Y + +++ E L F
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD-VLLSTSLLTMYAKC 399
+M +PN+ S + V++AC+N+ G+ IHS K I + + + +L+ MY+KC
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + AR +FD M E N VS NSMI GY HG ++L +F M +R P TFI VL
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC H G V EGW YF++M+ + IEP+ EHY CM+DLLGRAG + ++E L++++P G
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
W +LL AC TH N EL A +++LEP + PYV+LSN+YAS G+W+EV +R+
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
M+++ ++K G S + + + E+ +Y L E+ +MK
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMK 621
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 215/480 (44%), Gaps = 72/480 (15%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
F L K C R L GK +H+ +K + N I +YS CG + ARK F+D
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
++ ++N++I Y K A +LFD +PE D+ ++N++IS Y D G+ A GLF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 280 M------------------------------------PFRDVVSW-NCMIDGYAKIGNVT 302
M F VS N ++ Y K G++
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 303 SARNCFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
A+ F M +R+ VSWN ++ Y + ++ + L LF M+R + +L SVLTA
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC-GVMDLARNVFDNMTEKNVVSW 420
+ + G H + K + + + L+ +Y+KC G M R VF+ +TE ++V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 421 NSMIMGYGMHGQG-EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
N+M+ GY + + E ALE F +M+ G PND +F+CV+SAC++ +G L
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ ++ ++ + + G ++D+ L ++ + H+ L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM----------------AEHNTVSLN 414
Query: 540 KIV---AQHLMELEP---------RDPGP----YVLLSNIYASEGKWDEVENLRRIMKEK 583
++ AQH +E+E R P ++ + + A G+ +E N +MKEK
Sbjct: 415 SMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEK 474
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 149/326 (45%), Gaps = 24/326 (7%)
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFD-----FMPERDIFTWNSMISGYVDVGDMEAANG 275
W L + ++ + R++ + L F+P F+ N I Y G + A
Sbjct: 6 WTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFS-NHFILLYSKCGRLAWARK 64
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
F + +V S+N +I YAK A FD++ ++VS+N L++ Y C +
Sbjct: 65 AFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L LF M + +L +V+TAC + V IGQ +HS V ++ +LLT
Sbjct: 125 LGLFSGMREMGLDMDXFTLSAVITACCD-DVGLIGQ-LHSVAVSSGFDSYVSVNNALLTY 182
Query: 396 YAKCGVMDLARNVFDNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
Y K G +D A+ VF M ++ VSWNSMI+ YG H +G KAL +F EM +RG + T
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFT 242
Query: 455 FICVLSACT-----HAGMVLEGWWYFDLMQRIYKIEPKVEHYGC-MVDLLGR-AGLMRDS 507
VL+A T G+ G Q I + H G ++DL + G M D
Sbjct: 243 LASVLTAFTCLEDLSGGLQFHG-------QLIKTGFHQNSHVGSGLIDLYSKCGGGMSDC 295
Query: 508 EELVSKLPMEAGPALWGALLSACSTH 533
++ ++ E LW ++S S +
Sbjct: 296 RKVFEEI-TEPDLVLWNTMVSGYSQN 320
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 313/595 (52%), Gaps = 22/595 (3%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV 106
D RL + D + +LQ +K+ +IH ++ +G + F + V+ L +
Sbjct: 139 DEVRLVVGDYA-CLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS-LYAKCRQI 196
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+ F+ +Q D T++ + AL + M + + T +
Sbjct: 197 DNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQ-MQEAGQKPDSVTLVSILPA 255
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
A +++LR G+ +H + GFE + V N+L+ MY CG AR VF+ +V+W
Sbjct: 256 VADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSW 315
Query: 227 NSMIDGYVKNREVGFARELF-DFMPERDIFTWNSMIS---GYVDVGDMEAA---NGLFDL 279
N+MIDG +N E A F + E ++ T +M+ ++GD+E + L D
Sbjct: 316 NTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDK 375
Query: 280 MPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
+ VS N +I Y+K V A + F+ + NV +WN ++ Y + E L L
Sbjct: 376 LKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNL 434
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F M K + +L+ V+TA A+ V +WIH + + +V +ST+L+ MYAK
Sbjct: 435 FCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAK 494
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG + AR +FD M E++V++WN+MI GYG HG G++ L++F EM+K PND TF+ V
Sbjct: 495 CGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSV 554
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
+SAC+H+G V EG F MQ Y +EP ++HY MVDLLGRAG + D+ + ++P++
Sbjct: 555 ISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKP 614
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
G ++ GA+L AC H N ELG+ AQ L +L+P + G +VLL+NIYAS WD+V +R
Sbjct: 615 GISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRT 674
Query: 579 IMKEKELEKAVGSSLVHPGEFASE-----SIVENCPPHRKCIVYSMLGEIGAQMK 628
M++K L K G S V E +E S N P +K +Y+ L +G ++K
Sbjct: 675 AMEDKGLHKTPGCSWV---ELRNEIHTFYSGSTNHPESKK--IYAFLETLGDEIK 724
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 240/485 (49%), Gaps = 15/485 (3%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
HP + LE+C++ KE +QI ++ +G + ++V+ C S S + F+ ++
Sbjct: 48 HPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFC-KFGSNSEAARVFEHVE 106
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ + ++K + N G ++ +MM V + L ++C L++G+
Sbjct: 107 LKLDVLYHIMLKGYAK-NSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGR 165
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
++H I+ GFE +LFV +++ +Y+ C ++ +A K+FE DLV+W +++ GY +N
Sbjct: 166 EIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNG 225
Query: 238 EVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRD-----VVSW 288
A +L M E D T S++ D+ + + FR V
Sbjct: 226 HAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGY-AFRSGFESLVNVT 284
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++D Y K G+ AR F M + VVSWN ++ + + E F +M+
Sbjct: 285 NALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEV 344
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P ++M VL ACAN+G ++ G ++H + K ++ +V + SL++MY+KC +D+A ++
Sbjct: 345 PTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASI 404
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+N+ EK V+WN+MI+GY +G ++AL +F M+ +G + T + V++A +
Sbjct: 405 FNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVN 463
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
+ W L R ++ V +VD+ + G ++ + +L + E W A++
Sbjct: 464 RQAKWIHGLAVRAC-MDNNVFVSTALVDMYAKCGAIKTARKLFDMMQ-ERHVITWNAMID 521
Query: 529 ACSTH 533
TH
Sbjct: 522 GYGTH 526
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 123/269 (45%), Gaps = 17/269 (6%)
Query: 274 NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
NG ++ F+ V I + K G+ + A F+ + ++ V ++I+L Y +
Sbjct: 73 NGFYNEHLFQTKV-----ISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLG 127
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ L F RM+ + + +L C + G+ IH I + ++ + T+++
Sbjct: 128 DALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVM 187
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
++YAKC +D A +F+ M K++VSW +++ GY +G ++AL++ ++M++ G P+
Sbjct: 188 SLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSV 247
Query: 454 TFICVLSACT-----HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
T + +L A G + G+ + E V ++D+ + G R +
Sbjct: 248 TLVSILPAVADMKALRIGRSIHGYAFRS------GFESLVNVTNALLDMYFKCGSARIA- 300
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNSE 537
LV K W ++ C+ + SE
Sbjct: 301 RLVFKGMRSKTVVSWNTMIDGCAQNGESE 329
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 251/476 (52%), Gaps = 44/476 (9%)
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA--RKVFEDGPV 220
L V G + + K+VHA I + G E FV L+ + +D R VF+
Sbjct: 42 LVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEY 101
Query: 221 WDLVTWNSMIDGYVKN-------------REVGFARELFDFMP----------------- 250
+ W ++I GY R G F F
Sbjct: 102 PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQV 161
Query: 251 ----------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGN 300
D++ N++I YV G + + +FD M RDV+SW +I YAK+GN
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ +A FD + M+++V+W ++ Y + E L +F+RM K +E +L+ V++A
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISA 281
Query: 361 CANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
CA +G W+ ++ P +V++ ++L+ MYAKCG ++ A VF+ M E+NV
Sbjct: 282 CAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVY 341
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
S++SMI+G+ MHG A+E+F EM K PN TFI VL+AC+HAGMV +G F +M
Sbjct: 342 SYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMM 401
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ + + P +HY CMVDLLGRAG + ++ LV +PM +WGALL AC H N ++
Sbjct: 402 EECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDM 461
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+I A HL ELEP G Y+LLSNIYAS G+WD+V +R++M+ K L+K G S V
Sbjct: 462 AQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWV 517
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 214/473 (45%), Gaps = 61/473 (12%)
Query: 27 LPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLS 86
LPKT + F+ Q++ L ++ L C+ + + Q+H + GL
Sbjct: 13 LPKTSYCQLQTQSFIPFSVRQEQKI----LESRLVSVLHGCTHINQVKQVHAHIFRKGLE 68
Query: 87 QDSFAASRVLKKLCTSLSSVSLSV-----LFFDGIQEPDAFMCNTIMKSFLMLNDPFGAL 141
Q F VL KL +L+ + + + L F ++ P+ F+ +++ + L PF
Sbjct: 69 QCCF----VLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGY-ALQGPFMES 123
Query: 142 SFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHAR-IVKCGFELDLFVRNSLIH 200
Y M + + +TF L K C+ + G++VH + I+ GF DL+V N+LI
Sbjct: 124 VLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLID 183
Query: 201 MYSVCG----------EVLD---------------------ARKVFEDGPVWDLVTWNSM 229
MY CG E+LD A ++F+ P+ D+V W +M
Sbjct: 184 MYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAM 243
Query: 230 IDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGLFDLM----- 280
+ GY +N A E+F+ M + D T +IS +G + AN + D+
Sbjct: 244 VTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGF 303
Query: 281 -PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
P +VV + +ID YAK G+V A F+RM RNV S++ ++ + + LF
Sbjct: 304 GPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELF 363
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR-IKPDVLLSTSLLTMYAK 398
D M++ + KPN + + VLTAC++ G+++ GQ + + +++C + P ++ + +
Sbjct: 364 DEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGR 423
Query: 399 CGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRG 447
G ++ A N+ M + W +++ +HG + A E+E G
Sbjct: 424 AGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNG 476
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV- 401
+R + K E+ L+SVL C ++ + + +H++I + ++ + LL K V
Sbjct: 31 VRQEQKILESRLVSVLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVP 87
Query: 402 MD-LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
MD R VF + N W ++I GY + G +++ ++ M ++G P TF +L
Sbjct: 88 MDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLK 147
Query: 461 ACTHA 465
AC+ A
Sbjct: 148 ACSAA 152
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 251/426 (58%), Gaps = 10/426 (2%)
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EGK HARI+K L N+L+ MY G + A K+F W++MI GY
Sbjct: 359 EGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHK-SSEDWSTMILGYS 417
Query: 235 ----KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVV 286
K + + F RE+ E D+ + S+IS VG + + +V
Sbjct: 418 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 477
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N ++D Y K G+VT+ F R R+V+SWN L++ Y + E + LFD+M++
Sbjct: 478 VANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEK 537
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
PN+ + + VL+ACA++ +D G+ IH YI++ + ++ + T+L+ MYAKCG ++ +R
Sbjct: 538 VYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSR 597
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+F++ E++V+ WN MI YGMHG E A+E+F ME+ PN TF+ +LSAC H G
Sbjct: 598 KLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTG 657
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
VLEG FD MQ+ Y IEP ++HY ++DLLGR+G + +E LV +P+ +WG+L
Sbjct: 658 HVLEGRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSL 716
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
LSAC H+ E+G +A++ +E +P++ G Y++LS++Y+ G+WDEVE +R +MK++ +E
Sbjct: 717 LSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVE 776
Query: 587 KAVGSS 592
K G S
Sbjct: 777 KRAGWS 782
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 147/591 (24%), Positives = 260/591 (43%), Gaps = 42/591 (7%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
T + Q H+ ++ +G S + F A++++ + S F I D F+ N+I+
Sbjct: 52 TFQSLLQFHSLIITTGNSNNVFFATKLMA-FYAYHRKPAFSTHLFRLIHSKDIFLWNSII 110
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
+S D A FY + M A N +T P++ CA + G +H K G
Sbjct: 111 QSHFSNGDYQRAFDFYLQ-MRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLG- 168
Query: 189 ELDLFVRNS-----LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
LFV NS I+MYS CG V A +F + V D+VTW ++I GYV+N E G
Sbjct: 169 ---LFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGL 225
Query: 244 E-LFDFMPERDIFTWNSMISGYVDVGDMEAA------NGLF---DLMPFRDVVSWNCMID 293
+ LF+ + ++ SG+ D++A +GL + F V S ++
Sbjct: 226 KCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKS--TILS 283
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEAS 353
Y++ G+ A CF ++ ++++SW ++A++ + ECL LF M + P+E
Sbjct: 284 MYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIV 343
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+ +L N I G+ H+ I K + +LL+MY K G + A +F +
Sbjct: 344 ISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF- 402
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
K+ W++MI+GY GQ EK + EM G P+ + + V+S+C+ G + G
Sbjct: 403 HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRS 462
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
+ IE V ++D+ G++G + + + + ++ W L+S+
Sbjct: 463 IHCYAIKNSIIE-NVSVANSLMDMYGKSGHVTATWRIFHR-TLQRDVISWNTLISSYKQS 520
Query: 534 SNSELGKIVAQHLM--ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK--AV 589
I+ ++ ++ P ++LS A DE E + + +KE E +
Sbjct: 521 GILAEAIILFDKMVKEKVYPNKVTCIIVLSAC-AHLASLDEGEKIHQYIKENGFESNITI 579
Query: 590 GSSLV----HPGEFASESIVENCPPHRKCIV-------YSMLGEIGAQMKM 629
++L+ GE + + N R I+ Y M G + + M++
Sbjct: 580 RTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEI 630
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
++KM+ + V N T ++ CA + SL EG+K+H I + GFE ++ +R +LI MY+
Sbjct: 530 FDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAK 589
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSM 260
CGE+ +RK+F D++ WN MI Y + V A E+F M E +I T+ S+
Sbjct: 590 CGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSL 649
Query: 261 ISGYVDVGDMEAANGLFDLM 280
+S G + LFD M
Sbjct: 650 LSACNHTGHVLEGRHLFDRM 669
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 282/528 (53%), Gaps = 6/528 (1%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH Q +V G + S ++K + V + FD + E D + NT++ +
Sbjct: 141 IHGQAIVDGCDSELLLGSNIVK-MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
++ + + + + T + A ++ LR G ++H+ K G +V
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL 259
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
I +YS CG++ A +F + D+V +N+MI GY N E + LF +
Sbjct: 260 TGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAK 319
Query: 256 TWNSMISGYVDVGD----MEAANGLFDLMPFRDVVSWNCMIDG-YAKIGNVTSARNCFDR 310
+S + V V + A +G F S + + Y+K+ + SAR FD
Sbjct: 320 LKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDE 379
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+++ SWN +++ Y + + + LF M + PN ++ +L+ACA +G + +G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG 439
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+W+H ++ + + +ST+L+ MYAKCG + AR +FD M +KN V+WN+MI GYG+H
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLH 499
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G G++AL +F EM G P TF+CVL AC+HAG+V EG F+ M Y EP V+H
Sbjct: 500 GHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y C+VD+LGRAG ++ + + + +P++ GP++W LL AC H ++ L + V++ L EL+
Sbjct: 560 YACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELD 619
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
P + G +VLLSNI++++ + + +R+ K+++L KA G +L+ GE
Sbjct: 620 PDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 236/514 (45%), Gaps = 16/514 (3%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L + +++ Q H Q+++ G D +++ ++L + L ++ + F +Q PD
Sbjct: 24 LDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRL-SDLGAIYYARDIFLSVQRPD 82
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F+ N +M+ F + P +L+ + + ++ N T+ +G R R G +H
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIH 142
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ + G + +L + ++++ MY V DARKVF+ P D + WN+MI GY KN
Sbjct: 143 GQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 241 FARELF-DFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG- 294
+ ++F D + E D T ++ ++ ++ + L S + ++ G
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 295 ---YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
Y+K G + A F ++V++N ++ Y + L LF ++ AK
Sbjct: 263 ISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKS 322
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
++L+S++ ++ +I IH Y K +ST+L T+Y+K ++ AR +FD
Sbjct: 323 STLVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDE 379
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
EK++ SWN+MI GY +G E A+ +F EM+ +PN T C+LSAC G + G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG 439
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
W DL+ R E + ++ + + G + ++ L +P + W ++S
Sbjct: 440 KWVHDLV-RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMISGYG 497
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
H + + + ++ P P L +YA
Sbjct: 498 LHGHGQEALTIFSEMLN-SGIAPTPVTFLCVLYA 530
>gi|255586679|ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526049|gb|EEF28413.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 254/441 (57%), Gaps = 3/441 (0%)
Query: 42 KFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCT 101
KF T + +LP L I+ L SC T+ HQI + ++ GL + + +++
Sbjct: 51 KFASTLSPKLPHRLLEEKIISLLYSCKTLNHLHQIQSHIINHGLQFNDYITPKIITSFAL 110
Query: 102 SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP 161
+ + FD I EP+ N ++K + LND + + KM++ + N ++FP
Sbjct: 111 -FKRMRHAHKLFDQIPEPNVSNWNAMLKGY-SLNDSHREVIVLFRKMISMDILPNCFSFP 168
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
++ K I + +EG+++H ++K G + FV LI +YS ++ A +VF +
Sbjct: 169 IVIKSSVKINAFKEGEELHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVFGEMIER 228
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
++V W SMI G++ ++ AR LF+ P+RD+ WN MISGY+D+GD+ A LF MP
Sbjct: 229 NVVAWTSMIKGFILCNDIETARRLFELAPQRDVVLWNIMISGYIDIGDLVRAQELFHKMP 288
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
+DV+SWN +++GYA G++ + F+ M RNV SWN L+ Y + E L F R
Sbjct: 289 NKDVMSWNTLLNGYANGGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEVLSSFKR 348
Query: 342 M-IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M + G PN+A+L++VL+ACA +G +D+G+W+H Y Q K +V + +L+ MYAKCG
Sbjct: 349 MLVDGIVVPNDATLVTVLSACARLGALDLGKWVHMYAQSNGYKGNVYIGNALIDMYAKCG 408
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
++ A VF ++ +K+++SWN++I G +HG+ AL +F M+ G P+ TF+ VL
Sbjct: 409 NVENAIVVFKSLDKKDLISWNTLIGGLAVHGRAADALYLFSRMKDAGEKPDGITFLGVLC 468
Query: 461 ACTHAGMVLEGWWYFDLMQRI 481
ACTH G+V +G+ YF M +
Sbjct: 469 ACTHMGLVDDGFSYFQSMTTV 489
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 287/529 (54%), Gaps = 15/529 (2%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD I EPD NT++ ++ + AL + M ++ + +T + C
Sbjct: 96 LFDQIPEPDLVSYNTLISAYADCGETAPALGLF-SGMREMGLDMDGFTLSAVITACCDDV 154
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED-GPVWDLVTWNSMI 230
L ++H+ V GF+ + V N+L+ Y G++ DA++VF G + D V+WNSMI
Sbjct: 155 GLI--GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 231 DGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAA----NGLFDLMPF 282
Y +++E A LF M R D+FT S+++ + + D+ L
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272
Query: 283 RDVVSWNCMIDGYAKIGN-VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE-CLRLFD 340
++ + +ID Y+K G ++ R F+ + ++V WN +++ Y + +++ E L F
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD-VLLSTSLLTMYAKC 399
+M +PN+ S + V++AC+N+ G+ IHS K I + + + +L+ MY+KC
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G + AR +FD M E N VS NSMI GY HG ++L +F M +R P TFI VL
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC H G V EGW YF++M+ + IEP+ EHY CM+DLLGRAG + ++E L++++P G
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
W +LL AC TH N EL A +++LEP + PYV+LSN+YAS G+W+EV +R+
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
M+++ ++K G S + + + E+ +Y L E+ +MK
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMK 621
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 215/480 (44%), Gaps = 72/480 (15%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
F L K C R L GK +H+ +K + N I +YS CG + ARK F+D
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
++ ++N++I Y K A +LFD +PE D+ ++N++IS Y D G+ A GLF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 280 M------------------------------------PFRDVVSW-NCMIDGYAKIGNVT 302
M F VS N ++ Y K G++
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 303 SARNCFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
A+ F M +R+ VSWN ++ Y + ++ + L LF M+R + +L SVLTA
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC-GVMDLARNVFDNMTEKNVVSW 420
+ + G H + K + + + L+ +Y+KC G M R VF+ +TE ++V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 421 NSMIMGYGMHGQG-EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
N+M+ GY + + E ALE F +M+ G PND +F+CV+SAC++ +G L
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ ++ ++ + + G ++D+ L ++ + H+ L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM----------------AEHNTVSLN 414
Query: 540 KIV---AQHLMELEP---------RDPGP----YVLLSNIYASEGKWDEVENLRRIMKEK 583
++ AQH +E+E R P ++ + + A G+ +E N +MKEK
Sbjct: 415 SMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEK 474
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 149/326 (45%), Gaps = 24/326 (7%)
Query: 221 WDLVTWNSMIDGYVKNREVGFARELFD-----FMPERDIFTWNSMISGYVDVGDMEAANG 275
W L + ++ + R++ + L F+P F+ N I Y G + A
Sbjct: 6 WTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFS-NHFILLYSKCGRLAWARK 64
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
F + +V S+N +I YAK A FD++ ++VS+N L++ Y C +
Sbjct: 65 AFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L LF M + +L +V+TAC + V IGQ +HS V ++ +LLT
Sbjct: 125 LGLFSGMREMGLDMDGFTLSAVITACCD-DVGLIGQ-LHSVAVSSGFDSYVSVNNALLTY 182
Query: 396 YAKCGVMDLARNVFDNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
Y K G +D A+ VF M ++ VSWNSMI+ YG H +G KAL +F EM +RG + T
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFT 242
Query: 455 FICVLSACT-----HAGMVLEGWWYFDLMQRIYKIEPKVEHYGC-MVDLLGR-AGLMRDS 507
VL+A T G+ G Q I + H G ++DL + G M D
Sbjct: 243 LASVLTAFTCLEDLSGGLQFHG-------QLIKTGFHQNSHVGSGLIDLYSKCGGGMSDC 295
Query: 508 EELVSKLPMEAGPALWGALLSACSTH 533
++ ++ E LW ++S S +
Sbjct: 296 RKVFEEI-TEPDLVLWNTMVSGYSQN 320
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 269/504 (53%), Gaps = 47/504 (9%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIH--MYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+S+ + K+ HA ++ G L N L+ + S G + A ++F+ P D+ +N+
Sbjct: 26 KSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNT 85
Query: 229 MIDGYV---------------KNREVGFARELFDFM------------------------ 249
MI + R GF + F+
Sbjct: 86 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 145
Query: 250 --PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
E ++F N+MI Y + G ++ A +FD +D+ SWN MI GY G + A+
Sbjct: 146 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEM 205
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD M R+VVSW ++A YV+ + E L LF M++ PNE +L S L ACAN+ +
Sbjct: 206 FDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVAL 265
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM--TEKNVVSWNSMIM 425
D G+WIH YI K IK + L SLL MYAKCG +D A VF + + V WN+MI
Sbjct: 266 DQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIG 325
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GY MHG+ ++A+++F +M+ +PN TF+ +L+AC+H +V EG YF M Y IE
Sbjct: 326 GYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIE 385
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P++EHYGCMVDLLGR+GL++++EE V +PM +WGALL AC H + E G+ + +
Sbjct: 386 PEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKI 445
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG-SSLVHPGEFASESI 604
+ EL+ G +VLL+N+Y++ G+WDE + +R+ ++ +K G SS+ G F +
Sbjct: 446 IKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLV 505
Query: 605 VENCPPHRKCIVYSMLGEIGAQMK 628
+ P K + Y L E+ ++K
Sbjct: 506 GDRSHPQTKQL-YLFLDEMTTKLK 528
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 200/421 (47%), Gaps = 45/421 (10%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKL-CTSLSSVSLSVLFFDGIQEP 119
L LESC ++ + Q H L+ +GL A+++LK L +S S+S + FD I +P
Sbjct: 19 LFSLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKP 78
Query: 120 DAFMCNTIMKSFLML-NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
D F+ NT++K+ ++ ++ + + N YTF + K C + EG++
Sbjct: 79 DVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQ 138
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+ +K G E +LFV N++I MY+ G V +AR+VF+ DL +WN MI GYV + E
Sbjct: 139 IRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGE 198
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFD-----------------LMP 281
+G A+E+FD M ERD+ +W ++I+GYV VG + A LF L
Sbjct: 199 IGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAA 258
Query: 282 FRDVVSWN----------------------CMIDGYAKIGNVTSARNCF-DRMCMR-NVV 317
++V+ + ++D YAK G + A F D ++ V
Sbjct: 259 CANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVW 318
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ-WIHSY 376
WN ++ Y E + LF++M PN+ + +++L AC++ +++ G+ + S
Sbjct: 319 PWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSM 378
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEK 435
I+P++ ++ + + G++ A NM + W +++ +H E+
Sbjct: 379 ASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIER 438
Query: 436 A 436
Sbjct: 439 G 439
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 299/590 (50%), Gaps = 53/590 (8%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV 106
DN P V L + + E Q+H ++ G +D F + ++ +
Sbjct: 138 DNFTFPFV------LSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIH-FYGECGEI 190
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
FD + E + +++ + A+S ++E M+ + N T +
Sbjct: 191 DCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFE-MVEVGIRPNSVTMVGVISA 249
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
CA ++ L+ G++V I + E++ + N+L+ MY CG + ARK+F++ +LV +
Sbjct: 250 CAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLY 309
Query: 227 NSMIDGYVKNREVGFARELFDFM-------PERDIFT----------------------- 256
N+++ YV+ G ARE+ + P D T
Sbjct: 310 NTIMSNYVRQ---GLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGY 366
Query: 257 --------W----NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
W N++I+ Y+ G E A +FD M + VSWN +I G+ + G++ SA
Sbjct: 367 VLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESA 426
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
F M ++VSWN ++ V+ + E + LF M ++ +++ V +AC +
Sbjct: 427 WKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYL 486
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G +D+ +WIH YI+K I D+ L T+L+ M+A+CG A VF+ M +++V +W + I
Sbjct: 487 GALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAI 546
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
M G G A+E+F EM ++G P+ F+ +L+A +H G+V +GW F M+ IY I
Sbjct: 547 GAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGI 606
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
P+ HYGCMVDLLGRAGL+ ++ L++ + ME +WG+LL+AC H N ++ A+
Sbjct: 607 APQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAE 666
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ EL+P G +VLLSNIYAS G+WD+V +R +KEK K GSS +
Sbjct: 667 RISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSI 716
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 241/519 (46%), Gaps = 51/519 (9%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV--------SLSVLFFDG 115
+ C T+ E Q+H+Q+ +GL+ + + ++ CT + + +L + D
Sbjct: 40 FKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISS-CTEMGTFESLEYAQKALELFIEDN 98
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+M +++++ F + A+ + + M V N +TFP + C +L E
Sbjct: 99 GIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDN-FTFPFVLSACTKSAALTE 157
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G +VH IVK GFE D+FV NSLIH Y CGE+ R+VF+ ++V+W S+I GY K
Sbjct: 158 GFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAK 217
Query: 236 NREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANG----LFDLMPFRDVVS 287
A LF M E I T +IS + D++ + +L + +
Sbjct: 218 RGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALM 277
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
N ++D Y K G + AR FD +N+V +N +++ YVR E L + M++
Sbjct: 278 VNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP 337
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
+P+ +++S ++AC+ + + G+W H Y+ + ++ + +++ MY KCG ++A
Sbjct: 338 RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACR 397
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGE-------------------------------KA 436
VFD M K VSWNS+I G+ +G E +A
Sbjct: 398 VFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEA 457
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVD 496
+E+F M+ G T + T + V SAC + G + W +++ I + +VD
Sbjct: 458 IELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKK-KDIHFDMHLGTALVD 516
Query: 497 LLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ R G + + ++ +K+ ++ + W A + A + N
Sbjct: 517 MFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 277/512 (54%), Gaps = 42/512 (8%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTF-PLLG 164
+S SV FFD + + D N +++ ++ D A +F+ ++ N ++ L+
Sbjct: 183 ISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFF-----SRIPSPNVISWVNLVN 237
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
C R + E +++ R+ E ++ N L+ Y +V A +F + P + +
Sbjct: 238 GYCQAGR-MGEARELFDRMP----ERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSI 292
Query: 225 TWNSMIDGYVKNREV-----------------------GF--------ARELFDFMPERD 253
+W +M+ G+V++ ++ G+ AR+LFD + RD
Sbjct: 293 SWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRD 352
Query: 254 IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
WN+MISGYV G ++ A LF MP +D++SWN MI G A+ G + A + F +M
Sbjct: 353 AVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKR 412
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
RN VSWN +++ +V+ + E L+ F M R + + L+A AN+ + IG+
Sbjct: 413 RNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQF 472
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
HS + + D +L++ YAKCG M AR VFD M +++VSWN++I GY +G G
Sbjct: 473 HSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNG 532
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
+ + +F EME P++ T + VLSAC+HAG++ EG +F+ M ++Y ++P EHY C
Sbjct: 533 SEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTC 592
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGRAG +R++ ELV + ++ +WGALL AC H N E+ + A+ L ELEP
Sbjct: 593 MVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCK 652
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKEL 585
YVLLSNI GKWD+ + +R +MKE L
Sbjct: 653 ASNYVLLSNICVEAGKWDDADKVRVLMKESIL 684
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 203/415 (48%), Gaps = 40/415 (9%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N++I Y+ G DA + ++ P D+V+WNS++ G ++N E+ + + FD MP++D+
Sbjct: 140 NTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLV 199
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN M+ GYV GD++ A+ F +P +V+SW +++GY + G + AR FDRM RN
Sbjct: 200 SWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERN 259
Query: 316 VVSWNILLALYVRCKDYCECLRLF-----------DRMIRG---DAKPNEASLMSVLTAC 361
VV+WN+LL+ YV+ LF M+ G K EA VL+
Sbjct: 260 VVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAK--DVLSKM 317
Query: 362 ANMGVIDIGQWIHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLARNVFD 410
+ V +H Y++ I D + ++++ Y +CG++D A +F
Sbjct: 318 PSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQ 377
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M K+++SWN+MI G GQ KA +F +M++R N ++ ++S G+ +E
Sbjct: 378 QMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRR----NTVSWNSIISGFVQNGLFVE 433
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLM--RDSEELVSKLPMEAGPALWGALLS 528
+F LM+R K + C+ A L R L+ + + + AL+S
Sbjct: 434 ALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALIS 493
Query: 529 ACSTHSNSELGKIVA--QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
A ++ G+++ Q E+ +D + L + YAS G EV + R M+
Sbjct: 494 AY-----AKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREME 543
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 144/312 (46%), Gaps = 44/312 (14%)
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE 251
+F N + + G++ AR++FE+ P ++V++N+M+ + + AR LFD MP
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
R+ +WN+M+ G +E A GLFD MP R+ SW M+ Y + G +T AR DRM
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRM 130
Query: 312 -------CMR-------------------------NVVSWNILLALYVRCKDYCECLRLF 339
C ++VSWN +L +R ++ ++ F
Sbjct: 131 PGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFF 190
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
D M D S +L G +D+ S I P+V+ +L+ Y +
Sbjct: 191 DEMPDKDL----VSWNLMLEGYVRAGDLDVASAFFSRIP----SPNVISWVNLVNGYCQA 242
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G M AR +FD M E+NVV+WN ++ GY Q E A +F+EM P N ++ ++
Sbjct: 243 GRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEM----PEKNSISWTTMV 298
Query: 460 SACTHAGMVLEG 471
S +G + E
Sbjct: 299 SGFVRSGKLQEA 310
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 13/236 (5%)
Query: 100 CTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYT 159
C + + F ++ + N+I+ F+ N F ++ M + T
Sbjct: 394 CAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQ-NGLFVEALQHFMLMRRDAKSADWCT 452
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+ A + +L+ G++ H+ +V+ GF D N+LI Y+ CG +L+AR+VF++
Sbjct: 453 YACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMV 512
Query: 220 VWDLVTWNSMIDGYVKNRE----VGFARELFDFMPERDIFTWNSMIS-----GYVDVGDM 270
V D+V+WN++IDGY N + RE+ D T ++S G +D G +
Sbjct: 513 VQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEG-L 571
Query: 271 EAANGLFDLMPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
N + L + V + CM+D + G + A M ++ N W LL
Sbjct: 572 HFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLG 627
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
V S LT A+ G + AR +F+ M +NVVS+N+M+ HG+ +A +F EM +
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG--CMVDLLGRAGL 503
R P ++ ++ AC+ G V + FD M P Y MV RAG
Sbjct: 71 RNPV----SWNTMMVACSQHGRVEDARGLFDAM-------PARNEYSWTIMVSCYVRAGE 119
Query: 504 MRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
+ + EL+ ++P E A + ++S + + E + Q + P P ++
Sbjct: 120 LTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEM-------PAPDIV---- 168
Query: 564 YASEGKWDEVENLRRIMKEKELEKAV 589
W+ V L +++ +E+ ++V
Sbjct: 169 -----SWNSV--LGGLIRNEEISRSV 187
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 180/603 (29%), Positives = 311/603 (51%), Gaps = 17/603 (2%)
Query: 49 QRLPIVDLSHPILQKL-ESCSTV---KEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS 104
QRL + +S P + SC+ + Q+H + + S D + ++ + S
Sbjct: 229 QRLGL-GVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADS 287
Query: 105 SVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLG 164
V FF + CN +M + AL + + M + + + +
Sbjct: 288 LVDARRAFFS-LPNHTVQACNAMMVGLVRTGLGAEALQLF-QFMTRSGIGFDVVSLSGVF 345
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
CA ++ +G +VH +K GF++D+ VRN+++ +Y C +++A VF++ D V
Sbjct: 346 SACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSV 405
Query: 225 TWNSMIDGYVKNR----EVGFARELFDFMPERDIFTWNSMISG-----YVDVGDMEAANG 275
+WN++I +N + + E+ + E D FT+ S++ ++ G +
Sbjct: 406 SWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKA 465
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
+ + VS + ++D Y K G +T A+ DR+ + +VSWN +++ + K E
Sbjct: 466 IKSGLGLDAFVS-STVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEA 524
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
+ F M+ KP+ + +VL CAN+ I++G+ IH I K + D +S++L+ M
Sbjct: 525 QKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDM 584
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
YAKCG M + +F+ + + VSWN+MI GY +HGQG +ALEMF M++ PN ATF
Sbjct: 585 YAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATF 644
Query: 456 ICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP 515
+ VL AC+H G++ +G YF LM YK+EP++EH+ CMVD+LGR+ +++ + + +P
Sbjct: 645 VAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMP 704
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVEN 575
+EA +W LLS C + E+ + A +++ L+P D Y+LLSN+YA GKW +V
Sbjct: 705 LEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSR 764
Query: 576 LRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMCRRDVA 635
RR+M++ L+K G S + + + R VY ML + +MK+ + A
Sbjct: 765 TRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEPA 824
Query: 636 SQI 638
S +
Sbjct: 825 SAL 827
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 162/354 (45%), Gaps = 41/354 (11%)
Query: 159 TFPLLGKVCAGI--RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE 216
TF L ++CAG +L G+ HAR++ GF FV N L+ MY+ CG AR VF+
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 217 DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL 276
P D V+WN+M+ Y + G A LF MP+ D+ +WN+++SGY G + GL
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 277 FDLMPFR---------------------------------------DVVSWNCMIDGYAK 297
M R DV + + ++D Y K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 298 IGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSV 357
++ A F M RN VSW +A V+ + Y L LF +M R ++ + SV
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+CA + + + +H++ K + D ++ T+++ +YAK + AR F ++ V
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTV 303
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ N+M++G G G +AL++F M + G + + V SAC L+G
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQG 357
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 228/510 (44%), Gaps = 39/510 (7%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKL--CTSLSSVSLSVLFFDGIQE 118
L++C +++ QIH + +GL D A S ++ C SL ++ FF G+ E
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLED---ALRFFHGMGE 199
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
++ + + N+ + + +M + + + + + CA I L ++
Sbjct: 200 RNSVSWGAAIAGCVQ-NEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQ 258
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HA +K F D V +++ +Y+ ++DAR+ F P + N+M+ G V+
Sbjct: 259 LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318
Query: 239 VGFARELFDFMPERDI----------FTWNSMISGYVDVGDME--AANGLFDLMPFRDVV 286
A +LF FM I F+ + + GY+ + A FD+ DV
Sbjct: 319 GAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDV----DVC 374
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N ++D Y K + A F M R+ VSWN ++A + + Y + + + M+R
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYG 434
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
+P++ + SVL ACA + ++ G +H K + D +S++++ MY KCG++ A+
Sbjct: 435 MEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQ 494
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+ D + + +VSWNS+I G+ ++ Q E+A + F EM G P+ T+ VL C +
Sbjct: 495 KLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLA 554
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHY--GCMVDLLGRAGLMRDS---------EELVSKLP 515
+ G + +I K E + Y +VD+ + G M DS + VS
Sbjct: 555 TIELGK---QIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNA 611
Query: 516 MEAGPALWGALLSACSTHSNSELGKIVAQH 545
M G AL G A + +V H
Sbjct: 612 MICGYALHGQGFEALEMFERMQQANVVPNH 641
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 195/442 (44%), Gaps = 27/442 (6%)
Query: 112 FFDGIQEPDAFMCNTIMKSFL---MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
F + +PD N ++ + M D G LS +M + V + T +L K C
Sbjct: 92 LFGAMPDPDVVSWNALLSGYCQRGMFRDSVG-LSV---EMARRGVAPDRTTLAVLLKACG 147
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
G+ L G ++HA VK G E+D+ ++L+ MY C + DA + F + V+W +
Sbjct: 148 GLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGA 207
Query: 229 MIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLFDLM---P 281
I G V+N + ELF M + + S+ + + A L
Sbjct: 208 AIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNK 267
Query: 282 FR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
F D V ++D YAK ++ AR F + V + N ++ VR E L+LF
Sbjct: 268 FSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQ 327
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M R + SL V +ACA + G +H K DV + ++L +Y KC
Sbjct: 328 FMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCK 387
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+ A VF M +++ VSWN++I + E + EM + G P+D T+ VL
Sbjct: 388 ALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLK 447
Query: 461 ACTHAGMVLEGWWYFDLMQ-RIYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPME 517
AC AG L+ Y ++ + K ++ + +VD+ + G++ ++++L ++
Sbjct: 448 AC--AG--LQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRI--- 500
Query: 518 AGPAL--WGALLSACSTHSNSE 537
G L W +++S S + SE
Sbjct: 501 GGQELVSWNSIISGFSLNKQSE 522
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 253/463 (54%), Gaps = 44/463 (9%)
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR--KVFEDGPVWDLVTW 226
G ++L + K+VHARI+ G + +V LI + +D +F + +
Sbjct: 55 GCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLY 114
Query: 227 NSMIDGYVKNREVGFARELFDFMPER---------------------------------- 252
N++I GY+ + + E + M +
Sbjct: 115 NALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTIL 174
Query: 253 ------DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARN 306
D+ NSMI Y+ G +E +FD MP RDV+SW +I Y K GN+ SA
Sbjct: 175 VGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGE 234
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
FD + ++++V+W ++++ + + E + F++M + +E +L+ V++ACA +G
Sbjct: 235 LFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGA 294
Query: 367 IDIGQWIHSYIQKCRI--KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
WI +K K V++ ++L+ MY+KCG + A VF M E+NV S++SMI
Sbjct: 295 AKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMI 354
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
+G+ MHG+ A+++F EM K PN TFI VL+AC+HAGMV +GW F+LM++ Y I
Sbjct: 355 LGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGI 414
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
+P +HY CMVDLLGRAG ++++ ELV +P+E +WGALL AC H + ++ I A
Sbjct: 415 KPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAAN 474
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
HL ELEP G Y+LL+NIYAS G+W++V +R++M+ + L K
Sbjct: 475 HLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRK 517
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 217/477 (45%), Gaps = 62/477 (12%)
Query: 1 MSVRLKFTKTTEASLSLDKFIKSQKNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPI 60
+++ KF+ T SL+ S K P+ P K P P + Q L I
Sbjct: 2 VTLSRKFSTATSDSLAC----ISLKQFPQNPQK-----PTPFYQIQQQQP---KQLESQI 49
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAAS---RVLKKLCTSLSSVSLSVLFFDGIQ 117
+ L+ C + + Q+H ++L++GL Q + + R L KL + LS+ F+ +
Sbjct: 50 VTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSI--FNQVN 107
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
P+ F+ N +++ +L + + + +Y M + V +TF L K C + G+
Sbjct: 108 YPNPFLYNALIRGYL-IEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGR 166
Query: 178 KVHAR-IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
++H + I+ GF DL V NS+I MY CG + RKVF++ P D+++W +I YVK+
Sbjct: 167 QIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKS 226
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP--------------- 281
+ A ELFD +P +D+ W M+SG+ A F+ M
Sbjct: 227 GNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVI 286
Query: 282 --------------FRD------------VVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
RD VV + +ID Y+K G+V A F M RN
Sbjct: 287 SACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERN 346
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V S++ ++ + + ++LFD M++ + KPN + + VLTAC++ G+++ G I
Sbjct: 347 VYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFE 406
Query: 376 YIQKCR-IKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMH 430
++KC IKP T ++ + + G + A + M E + W +++ +H
Sbjct: 407 LMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIH 463
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 175/485 (36%), Positives = 259/485 (53%), Gaps = 53/485 (10%)
Query: 163 LGKVCAGIRSLREGKKVHARIVK-----CGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
L ++ ++LRE KK H +I+K G + L R + +S G A VF
Sbjct: 21 LSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHM 80
Query: 218 GPVWDLVTWNSMIDGYVK---NREVGFARELF--------DFMPE--------------- 251
DL +N MI Y+ + F + L D +P
Sbjct: 81 IKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWL 140
Query: 252 ------------------RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMID 293
+D++ NS+IS Y+ G + A +FD M DVV+WN M+
Sbjct: 141 DGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVI 200
Query: 294 GYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGD--AKPN 350
G + G + A + F +M RN+++WN ++ + E L LF M I D KP+
Sbjct: 201 GCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPD 260
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ ++ SVL+ACA +G ID G+W+H Y+++ I+ DV++ T+L+ MY KCG + A +F+
Sbjct: 261 KITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFE 320
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M EK+ +W MI + +HG G KA F+EMEK G PN TF+ +LSAC H+G+V +
Sbjct: 321 EMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQ 380
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G W FD+M+R+Y IEP+V HY CMVD+L RA L +SE L+ +PM+ +WGALL C
Sbjct: 381 GRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGC 440
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV- 589
H N ELG+ V HL++LEP + YV +IYA G +D + +R IMKEK +EK +
Sbjct: 441 QMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKIP 500
Query: 590 GSSLV 594
G S++
Sbjct: 501 GCSMI 505
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 240/524 (45%), Gaps = 73/524 (13%)
Query: 54 VDLSHPILQKLESCSTVKEFHQIHTQLLVSGL--SQDSFAASRVLKKLCT--SLSSVSLS 109
+ L + + + +E C ++E + HTQ+L S + D + L +C+ S S +
Sbjct: 15 LTLRNTLSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYA 74
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLML----NDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
F I+ PD N ++++++ + + F Y++M K + N TFP L K
Sbjct: 75 TNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLK 134
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
C G+ +H +++K GF D++V NSLI +Y G + +ARKVF++ V D+VT
Sbjct: 135 GCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVT 194
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-- 283
WNSM+ G ++N + A +LF M R+I TWNS+I+G G + + LF M
Sbjct: 195 WNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSD 254
Query: 284 ----------------------------------------DVVSWNCMIDGYAKIGNVTS 303
DVV +++ Y K G+V
Sbjct: 255 DMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQK 314
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A F+ M ++ +W ++++++ + F M + KPN + + +L+ACA+
Sbjct: 315 AFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAH 374
Query: 364 MGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWN 421
G+++ G+W +++ I+P V ++ + ++ + D + + +M K +V W
Sbjct: 375 SGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWG 434
Query: 422 SMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+++ G MHG GEK + +++E N A ++ AGM FD
Sbjct: 435 ALLGGCQMHGNVELGEKVVHHLIDLEPH----NHAFYVNWCDIYAKAGM-------FDAA 483
Query: 479 QRIYKI--EPKVEHY--GC-MVDLLGRAGLMRDSEELVSKLPME 517
+RI I E ++E GC M+++ G + S S+LPM+
Sbjct: 484 KRIRNIMKEKRIEKKIPGCSMIEINGE--VQEFSAGGSSELPMK 525
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 274/501 (54%), Gaps = 40/501 (7%)
Query: 168 AGIRSLREGKKVHARIVKCGFE-LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
A + LRE +++HA + G V + Y+ G V DARK+F++ P DL+++
Sbjct: 22 AQCKKLRELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLISF 81
Query: 227 NSMIDGYVK------------------NREVGFARE---------------------LFD 247
S++ +++ +R GFA +F
Sbjct: 82 TSLMSLHLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFR 141
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNC 307
+ ++ N++I Y G E+A +FD M +D V+W M+ GY K V SA +
Sbjct: 142 LGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDSALSF 201
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FD++ +R+VV+W L+ +V+ + L LF RM+ +P +++ VL+ACA++G +
Sbjct: 202 FDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGAL 261
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
D+G+ IH Y KC ++++S +L+ MYAK G +++A +VF + K+ +W +MI
Sbjct: 262 DLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMISCC 321
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
+ G G+KALE+F +M + G PN TF+ VLSAC+H+G++ EG FD M+++YKI+P
Sbjct: 322 TVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYKIDPL 381
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+EHYGCM+DLLGR GL+ ++E L++ + +E +W +LLSAC N+ L +I + ++
Sbjct: 382 LEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLAEIAGKEIV 441
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVEN 607
+ EP D G YVLL N+YAS KW E +R+ M ++ K G S + E +VE+
Sbjct: 442 KREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSWIEIDGAVHEFLVED 501
Query: 608 CPPHRKCIVYSMLGEIGAQMK 628
+ +Y L + Q+K
Sbjct: 502 KTHDARREIYETLEYMSRQLK 522
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 194/436 (44%), Gaps = 47/436 (10%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L C ++E +IH + GL + S + + V+ + FD I PD
Sbjct: 21 LAQCKKLRELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLIS 80
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA--GIRSLREGKKVHA 181
++M L L++ A+S + + A H F ++G + A G G+ VH
Sbjct: 81 FTSLMSLHLQLDNQREAISLFARVVAAG---HRPDGFAVVGALSASSGAGDQVVGRAVHG 137
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
I + G + ++ V N+LI MYS CG+ A KVF+ + D VTW SM+ GY+K V
Sbjct: 138 LIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDS 197
Query: 242 ARELFDFMPERDIFTWNSMISGYVD--------------------------VGDMEAAN- 274
A FD +P R + W ++I+G+V VG + A
Sbjct: 198 ALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACAD 257
Query: 275 -GLFDLMPF-----------RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
G DL +++ N ++D YAK G++ A + F + ++ +W +
Sbjct: 258 IGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTM 317
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKC-R 381
++ D + L LF M+R PN + +SVL+AC++ G+I+ G + +++ +
Sbjct: 318 ISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYK 377
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMF 440
I P + ++ + + G+++ A + +M E ++V W S++ + G A
Sbjct: 378 IDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLAEIAG 437
Query: 441 MEMEKRGPTPNDATFI 456
E+ KR P +D ++
Sbjct: 438 KEIVKREP-GDDGVYV 452
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 298/552 (53%), Gaps = 27/552 (4%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+ + S +V Q+H +L SG + + + ++ + V + FD + E
Sbjct: 201 VSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKN-HRVDSARKVFDEMTER 259
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D N+I+ ++ LS + + M+ +E + T + CA R + G+ V
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQ-MLFSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H VK F + N+L+ MYS CG++ A+ VF + +V++ SMI GY +
Sbjct: 319 HCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLA 378
Query: 240 GFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDL------------MPFR 283
G A +LF+ M E D++T +++ + A N L D M F
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVL-------NCCARNRLLDEGKRVHEWIKENDMGF- 430
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM- 342
D+ N ++D YAK G++ A F M +++++SWN ++ Y + E L LF+ +
Sbjct: 431 DIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLL 490
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ P+E ++ VL ACA++ D G+ IH YI + D ++ SL+ MYAKCG +
Sbjct: 491 VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 403 DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
LAR +FD++T K++VSW MI GYGMHG G++A+ +F +M + G P++ +F+ +L AC
Sbjct: 551 LLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYAC 610
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+H+G+V EGW +F++M+ KIEP VEHY C+VD+L R G + + + +P+ +
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATI 670
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKE 582
WGALL C H + +L + VA+ + ELEP + G YVL++NIYA KW+EV+ LR+ + +
Sbjct: 671 WGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQ 730
Query: 583 KELEKAVGSSLV 594
+ L K G S +
Sbjct: 731 RGLRKNPGCSWI 742
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/492 (30%), Positives = 248/492 (50%), Gaps = 37/492 (7%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE 118
+LQ ++K+ ++ + +G DS S+ L + T+ + + FD ++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSK-LALMYTNCGDLKEASRVFDQVKI 157
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
A N +M D G++ + +KMM+ VE + YTF + K + +RS+ G++
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLF-KKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQ 216
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN-- 236
+H I+K GF V NSL+ Y V ARKVF++ D+++WNS+I+GYV N
Sbjct: 217 LHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 237 REVG---FARELFDFMPERDIFTWNSMISGYVD-----VGDMEAANGLFDLMPFRDVVSW 288
E G F + LF + E D+ T S+ +G D +G G+ D
Sbjct: 277 AEKGLSVFVQMLFSGI-EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFC- 334
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N ++D Y+K G++ SA+ F M R+VVS+ ++A Y R E ++LF+ M
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
P+ ++ +VL CA ++D G+ +H +I++ + D+ +S +L+ MYAKCG M A V
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMF--MEMEKRGPTPNDATFICVLSACTH-- 464
F M K+++SWN++I GY + +AL +F + +EKR +P++ T CVL AC
Sbjct: 455 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKR-FSPDERTVACVLPACASLS 513
Query: 465 ---AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG------LMRD---SEELVS 512
G + G+ +M+ Y + V + +VD+ + G L+ D S++LVS
Sbjct: 514 AFDKGREIHGY----IMRNGYFSDRHVAN--SLVDMYAKCGALLLARLLFDDITSKDLVS 567
Query: 513 KLPMEAGPALWG 524
M AG + G
Sbjct: 568 WTVMIAGYGMHG 579
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
R+V N L + + ++L + D P +L SVL CA+ + G+ +
Sbjct: 59 RSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
++I+ D L + L MY CG + A VFD + + + WN ++ G
Sbjct: 117 DNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDF 176
Query: 434 EKALEMFMEMEKRGPTPNDATFICV 458
++ +F +M G + TF CV
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCV 201
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 188/567 (33%), Positives = 311/567 (54%), Gaps = 29/567 (5%)
Query: 53 IVDLS-HPILQKLE---SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL 108
IV LS H +L L+ ++K Q H+Q+L + SQ++F +R++ T S+ +
Sbjct: 21 IVSLSPHNLLHLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSI-M 79
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
S L FD + + ++ N+++ ++ + A+ + + M + + + YT + KV
Sbjct: 80 SKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLF--RQMGRCLLPDDYTLATISKVSG 137
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
I+ L GK +H + ++ GF D+ V NS++ MY C E DA KVF++ P ++ ++N
Sbjct: 138 EIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNV 197
Query: 229 MIDG--YVKNREVGFARELFDFMPE-------RDIFTWNSMI------SGYVDVGD---- 269
+I G + N + +L++F D FT S++ G D G
Sbjct: 198 IISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHC 257
Query: 270 MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
NGL DL DV + +ID Y++ + +R FD+M RN+ W ++ YV+
Sbjct: 258 YLVKNGL-DLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQN 316
Query: 330 KDYCECLRLFDRMIRGD-AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLL 388
L LF M R D +PN SL+SVL AC + + G+ +H++ K + L
Sbjct: 317 GAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISL 376
Query: 389 STSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+L+ MYAKCG +D AR VFDN + K+ ++W+S+I YG+HG+G++AL + EM ++G
Sbjct: 377 RNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQG 436
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
P+ T + VLSAC +G+V EG ++ + Y+++P VE GC+VDLLGR+G + +
Sbjct: 437 IKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQA 496
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+ + ++P+ GP++WG+LL+A H NS + + L+ELEP +P Y+ LSN YAS
Sbjct: 497 LDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASS 556
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLV 594
+WDE+ +R +MKE+ L K G S +
Sbjct: 557 RRWDEITEVRSMMKERGLRKVPGISWI 583
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 191/431 (44%), Gaps = 33/431 (7%)
Query: 132 LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD 191
+ L F + Y + V + + L ++ + SL+ ++ H++I+ F +
Sbjct: 1 MFLTRTFSRTTSRYRYHTSAIVSLSPHNLLHLLQLSIDLHSLKLTQQCHSQILTNCFSQN 60
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD---- 247
F+ LI Y+ G+ + ++ VF+ ++ WNS+I+GYVKN + A LF
Sbjct: 61 AFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGR 120
Query: 248 -FMPERDIFTWNSMISGYVD---VGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+P+ S +SG + +G + L + D+V N ++ Y +
Sbjct: 121 CLLPDDYTLATISKVSGEIQDLVLGKLIHGKSL-RIGFVSDIVVGNSVMSMYIRCREFGD 179
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKD-----YCECLRLFDRMIRGDAKPNEASLMSVL 358
A FD M RNV S+N++++ + Y + F RM + ++ S+L
Sbjct: 180 AMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLL 239
Query: 359 TACANM-GVIDIGQWIHSYIQK----CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
C + G D G+ +H Y+ K ++ DV + +SL+ MY++ + L+R VFD M
Sbjct: 240 PMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMK 299
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGW 472
+N+ W +MI GY +G E AL +F EM+++ PN + + VL AC ++ G
Sbjct: 300 SRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGG- 358
Query: 473 WYFDLMQRIYKIEPKVEH------YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
++++ K+E ++D+ + G + + + W ++
Sbjct: 359 ------KQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSI 412
Query: 527 LSACSTHSNSE 537
+SA H +
Sbjct: 413 ISAYGLHGKGQ 423
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 301/578 (52%), Gaps = 20/578 (3%)
Query: 61 LQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
L L++CS+ + ++H Q++ +G D F L + S+ + FDG+
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSD-FRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
D N ++ + D A +Y +M ++ N +F + C +L GK
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFY-RMQQVGLKPNKISFLSILDGCWTPEALAWGK 279
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
VHA+ + G D+ V SLI MY+ CG + AR+VF++ V D+V+W MI+GY +N
Sbjct: 280 AVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG 339
Query: 238 EVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGL---FDLMPF-RDVVSWN 289
+ A LF M E I T+ +++ ++ A + D+ F D++
Sbjct: 340 NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVST 399
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
++ YAK G + AR FD M R+VVSW+ ++ YV E F M R + +P
Sbjct: 400 ALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEP 459
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ + +++L AC ++G +D+G I++ K + V L +L+ M AK G ++ AR +F
Sbjct: 460 DGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIF 519
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D M ++V++WN+MI GY +HG +AL +F M K PN TF+ VLSAC+ AG V
Sbjct: 520 DTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVD 579
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EG +F + I P V+ YGCMVDLLGRAG + ++E L+ +P++ ++W +LL A
Sbjct: 580 EGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVA 639
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H N ++ + A+ + ++P D YV LS++YA+ G W+ V +R++M+ + + K
Sbjct: 640 CRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQ 699
Query: 590 GSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQM 627
G + + +VE+ + ++GEI A++
Sbjct: 700 GCTWIEVAGKVHTFVVEDRS-------HPLVGEIYAEL 730
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 194/388 (50%), Gaps = 28/388 (7%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+ L + C +R GK+V I++ G +L+++ N+LI +YS+CG V +AR++F+
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 219 PVWDLVTWNSMIDGYVKNREV--GFA--RELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
+VTWN++I GY + V FA R++ D E I T+ S++ +
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 275 GLFDLMPFRDVVS----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCK 330
+ + VS ++ Y K G++ AR FD + +R+V ++N+++ Y +
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
D+ + LF RM + KPN+ S +S+L C + G+ +H+ + D+ ++T
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
SL+ MY CG ++ AR VFDNM ++VVSW MI GY +G E A +F M++ G P
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL---------GRA 501
+ T++ +++AC + + +I +V+ G DLL +
Sbjct: 359 DRITYMHIMNACAISAN----------LNHAREIHSQVDIAGFGTDLLVSTALVHMYAKC 408
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSA 529
G ++D+ ++ +P W A++ A
Sbjct: 409 GAIKDARQVFDAMPRR-DVVSWSAMIGA 435
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 66/126 (52%)
Query: 338 LFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYA 397
+ R+ G + + + + C + +G+ + +I + + ++ +L+ +Y+
Sbjct: 44 VLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYS 103
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
CG + AR +FD++ K VV+WN++I GY G ++A +F +M G P+ TF+
Sbjct: 104 ICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLS 163
Query: 458 VLSACT 463
VL AC+
Sbjct: 164 VLDACS 169
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 311/640 (48%), Gaps = 55/640 (8%)
Query: 39 PKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFH-----QIHTQLLVSGLSQDSFAAS 93
P F+ P SH +L+ + + H Q+H L GLS+
Sbjct: 53 PLLAFSRLRRHLPPAAGTSHLLLRPVAALLHHHRSHLRLGVQLHALSLSLGLSRHPILLP 112
Query: 94 RVLKKLCT--SLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAK 151
R+L + SL + SV + P N ++ S L P AL+ Y E M
Sbjct: 113 RLLSVYTSHPSLLPSAASVAADSTLPLP----YNVLISSCLRHGLPLQALAAYQE-MGKN 167
Query: 152 FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA 211
V + +T+P + + CA R L G+ VH G + +LF +N+L+ MY+ CG++ A
Sbjct: 168 GVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASA 227
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDV 267
RKVF+ D+V+WNSMI Y + A ELF M E + TWN++ GY+ +
Sbjct: 228 RKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQM 287
Query: 268 GDMEAANGLFDLMPFRDV----------------VSW----------------------- 288
D AA GL M V W
Sbjct: 288 RDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVS 347
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N +I YA+ ++ AR F + VV+WN +L+ + E +F MI K
Sbjct: 348 NALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVK 407
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN ++++ L CA + + GQ +H +I K K LL SL+ MY+K G + +A+NV
Sbjct: 408 PNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNV 467
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M + +++S+ SMI GYGM G+G AL +F +M G P+ + VLSAC+H+G+V
Sbjct: 468 FDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLV 527
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
LEG F+ M Y I+P++EHY CM+DL RAGL+ +EE++ P +W AL+
Sbjct: 528 LEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVG 587
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC N E+G+ A+ L+E+ + G YVL++N+YA+ G WDE+ +R++M++ + KA
Sbjct: 588 ACHDRGNIEIGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKA 647
Query: 589 VGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
G + G + +V + +Y +L E+ QM+
Sbjct: 648 PGLAWTDLGNGFTPFLVGDRSNPLAPEIYVVLDELSEQMR 687
>gi|224136906|ref|XP_002322445.1| predicted protein [Populus trichocarpa]
gi|222869441|gb|EEF06572.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 285/552 (51%), Gaps = 73/552 (13%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L ++ C +K F +IH QL+ SG+ + +R + F G
Sbjct: 12 LLDSIQRCKKLKIFKKIHAQLITSGVVSNDLVVNRAAE-------------FFAKGPNFA 58
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D + C+ + +M F+ + +TFP + K CA ++ EG++V
Sbjct: 59 D-YACD------------------FLSQMEDGFLPY-MFTFPAVLKSCAKFMAVDEGRQV 98
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H I K F D++V NSL+H YSVCG + DA +V
Sbjct: 99 HGVIAKMDFVCDIYVENSLVHFYSVCGSLDDASRV------------------------- 133
Query: 240 GFARELFDFMPERDIFTWNSMI----SGYVDVGDMEAANGLFDLMPFR-DVVSWNCMIDG 294
FD M RD +W +I GY+ +G + +GL F + N ++D
Sbjct: 134 ------FDEMLVRDAVSWTGVIYPGIKGYLILG--KGIHGLIIERGFGLGLEVSNALMDM 185
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y K ++ + FD + +++VSW ++ V+CK E L LF + +P+ L
Sbjct: 186 YVKCESLPEEKQVFDELPEKDIVSWTSIICGMVQCKFPKEVLELFCDVQSSGIEPDGIIL 245
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
SVL+A A+ G +D G+ + YI IK D+ + T+++ MYAKCG +++A +F+ M
Sbjct: 246 TSVLSARASPGALDYGRLVREYIDHKAIKWDIQIGTAVVDMYAKCGCIEMAMQIFNVMPH 305
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
KNV++WN+M+ G MHG G+KAL++F EM + G PN+ TF+ L+AC H G V EG Y
Sbjct: 306 KNVLTWNAMLNGLAMHGHGQKALQLFEEMVREGMRPNEVTFLVTLTACCHCGFVGEGRRY 365
Query: 475 FDLMQ-RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
F M+ + Y + P++EHYGCMVDLL RAGL+ ++ EL +PM + GALLS C +
Sbjct: 366 FHWMKSQQYNLPPRLEHYGCMVDLLCRAGLLDEALELTKAMPMLPDVRIMGALLSTCKAN 425
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSL 593
N EL + + L+E + RD G YVLLSNI A +W +V +RR+MK +EK GSS+
Sbjct: 426 GNVELPREILDRLVEFDSRDSGVYVLLSNILAINQRWADVTRIRRLMK-MGIEKTPGSSV 484
Query: 594 VHPGEFASESIV 605
+ A E IV
Sbjct: 485 IEVDGKAHEIIV 496
>gi|293331391|ref|NP_001168246.1| uncharacterized protein LOC100382009 [Zea mays]
gi|223946981|gb|ACN27574.1| unknown [Zea mays]
gi|413932359|gb|AFW66910.1| hypothetical protein ZEAMMB73_426189 [Zea mays]
Length = 499
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 230/381 (60%), Gaps = 4/381 (1%)
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE--RDIFTWNSMISGYVDVGDMEAANG 275
G D+ N+ + Y +V A LF + D+ TW +M++G+ G + A
Sbjct: 108 GHARDVYVANAAVSSYFAASDVASADRLFAEVSTDVADVVTWTTMVTGHASAGGLGRARH 167
Query: 276 LFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCEC 335
FD M R+VVSWN M+ YA+ G +T AR+ FD M RN +W+ +++ V E
Sbjct: 168 FFDAMSERNVVSWNAMLSAYARAGMLTEARDLFDAMPTRNAATWSCMISGLVLSGRCWEA 227
Query: 336 LRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLL 393
L LF M+ PNE +L+SV++ACA M ++ G W+H+Y Q+ + V+L+++++
Sbjct: 228 LGLFGDMVHSSGIVPNEPALVSVVSACAQMRSLEHGAWVHAYAEQELQGAMSVVLASAII 287
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MY KCG + A VF M +N+ SWN+MI G M+G +AL + +M+ G PND
Sbjct: 288 DMYGKCGGIHSAIRVFAAMPMRNIYSWNAMITGLAMNGGERQALSLLWKMQMVGVQPNDI 347
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
TFI +LSACTH+G+V EG FD M + I+P +HYG MVDL+GR+G + ++ V
Sbjct: 348 TFIGLLSACTHSGLVNEGRRLFDSMIEDFGIQPFPQHYGLMVDLIGRSGRVMEALYFVKS 407
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P+E P LWGAL SAC H ELG+ VA+ L+ELEPR Y+LLSN+Y S +WD++
Sbjct: 408 MPVEPHPGLWGALASACKMHGKVELGEEVAKKLIELEPRHGSRYILLSNLYGSVNRWDDM 467
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
++R+I+K +++ K G+++V
Sbjct: 468 ASVRKILKRRKVPKGTGNAVV 488
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 46/302 (15%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ +++ ++ G + AR F+ ++V+WN+M+ Y + + AR+LFD MP
Sbjct: 145 DVVTWTTMVTGHASAGGLGRARHFFDAMSERNVVSWNAMLSAYARAGMLTEARDLFDAMP 204
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLF--------------------------------- 277
R+ TW+ MISG V G A GLF
Sbjct: 205 TRNAATWSCMISGLVLSGRCWEALGLFGDMVHSSGIVPNEPALVSVVSACAQMRSLEHGA 264
Query: 278 --------DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+L VV + +ID Y K G + SA F M MRN+ SWN ++
Sbjct: 265 WVHAYAEQELQGAMSVVLASAIIDMYGKCGGIHSAIRVFAAMPMRNIYSWNAMITGLAMN 324
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIKPDVLL 388
+ L L +M +PN+ + + +L+AC + G+++ G+ + S I+ I+P
Sbjct: 325 GGERQALSLLWKMQMVGVQPNDITFIGLLSACTHSGLVNEGRRLFDSMIEDFGIQPFPQH 384
Query: 389 STSLLTMYAKCG-VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEME 444
++ + + G VM+ V E + W ++ MHG+ GE+ + +E+E
Sbjct: 385 YGLMVDLIGRSGRVMEALYFVKSMPVEPHPGLWGALASACKMHGKVELGEEVAKKLIELE 444
Query: 445 KR 446
R
Sbjct: 445 PR 446
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 20/208 (9%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + +A + ++ ++ + AL + + + + + N + CA +R
Sbjct: 199 LFDAMPTRNAATWSCMISGLVLSGRCWEALGLFGDMVHSSGIVPNEPALVSVVSACAQMR 258
Query: 172 SLREGKKVHARIVK-CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
SL G VHA + + + + +++I MY CG + A +VF P+ ++ +WN+MI
Sbjct: 259 SLEHGAWVHAYAEQELQGAMSVVLASAIIDMYGKCGGIHSAIRVFAAMPMRNIYSWNAMI 318
Query: 231 DGYVKNREVGFARELFDFMPERDI-------FTWNSMISGYVDVGDMEAANGLFDLM--- 280
G N G R+ + + + T+ ++S G + LFD M
Sbjct: 319 TGLAMN---GGERQALSLLWKMQMVGVQPNDITFIGLLSACTHSGLVNEGRRLFDSMIED 375
Query: 281 ----PFRDVVSWNCMIDGYAKIGNVTSA 304
PF + M+D + G V A
Sbjct: 376 FGIQPFPQ--HYGLMVDLIGRSGRVMEA 401
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 304/565 (53%), Gaps = 24/565 (4%)
Query: 49 QRLPIVDLSHP---ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS 105
Q+L +V + +L+ + VKE ++H +L G ++ + ++
Sbjct: 187 QKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAY-FKFGG 245
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V + FD + EPD N+++ ++ L + + M+ VE + T +
Sbjct: 246 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQ-MLILGVEVDLTTLVSVLV 304
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA I +L G+ +H VK F ++ N+L+ MYS CG + A +VF +V+
Sbjct: 305 ACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVS 364
Query: 226 WNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYV---------DVGDMEA 272
W S+I YV+ A LFD M + DI+T S++ DV
Sbjct: 365 WTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVI 424
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
NG+ +P N +I+ YAK G+V AR F ++ ++++VSWN ++ Y +
Sbjct: 425 KNGMGSNLPVT-----NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLP 479
Query: 333 CECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSL 392
E L LF M + KP++ ++ VL ACA + +D G+ IH +I + D+ ++ +L
Sbjct: 480 NEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 538
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
+ MYAKCG++ LA+ +FD + +K+++SW MI GYGMHG G +A+ F EM G P++
Sbjct: 539 VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 598
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
++F +L+AC+H+G++ EGW +F+ M+ +EPK+EHY C+VDLL R G + + + +
Sbjct: 599 SSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIE 658
Query: 513 KLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
+P++ +WG LLS C H + +L + VA+H+ ELEP + YV+L+N+YA KW+E
Sbjct: 659 SMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEE 718
Query: 573 VENLRRIMKEKELEKAVGSSLVHPG 597
V+ LR+ M+++ ++ G S + G
Sbjct: 719 VKKLRKRMQKRGFKQNPGCSWIEVG 743
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 265/525 (50%), Gaps = 20/525 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+LQ ++++ ++H+ ++ +G+S D ++++ + + + FD I
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVF-MYVNCGDLVQGRKIFDKIMND 158
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
F+ N +M + + + ++S + +KM V N YTF + K A + ++E K+V
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLF-KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV 217
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H ++K GF + V NSLI Y G V A +F++ D+V+WNSMI+G V N
Sbjct: 218 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 277
Query: 240 GFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCM 291
G E+F M E D+ T S++ ++G++ L +VV N +
Sbjct: 278 GNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTL 337
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
+D Y+K GN+ A F +M +VSW ++A YVR Y + + LFD M +P+
Sbjct: 338 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDI 397
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
++ S++ ACA +D G+ +HSY+ K + ++ ++ +L+ MYAKCG ++ AR VF
Sbjct: 398 YTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 457
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ K++VSWN+MI GY + +ALE+F++M+K+ P+D T CVL AC + +G
Sbjct: 458 IPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKG 516
Query: 472 W-WYFDLMQRIYKIEPKVEHYGC-MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ +++R Y + H C +VD+ + GL+ ++ L +P + + W +++
Sbjct: 517 REIHGHILRRGYFSDL---HVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS-WTVMIAG 572
Query: 530 CSTH--SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDE 572
H N + + +EP D + + N + G +E
Sbjct: 573 YGMHGFGNEAISTFNEMRIAGIEP-DESSFSAILNACSHSGLLNE 616
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%)
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
S SVL CA ++ G+ +HS I I D L L+ MY CG + R +FD +
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
V WN ++ Y G +++ +F +M+K G N TF CVL G V E
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 213
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 284/513 (55%), Gaps = 46/513 (8%)
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CN ++++ ++ YY+ + A+ + + +T+P + + ++ EG+K HA
Sbjct: 17 CNVLIRTLARRGSFARVMAVYYD-LRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAA 75
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV--------- 234
+K GF D + +SL+ MY++ G V ARKVF++ P LV WN M+ Y+
Sbjct: 76 IKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAV 135
Query: 235 --------------------------KNREVGFARELFDFMPERDIFTW-----NSMISG 263
+ R++ R + +M ++F + N+++
Sbjct: 136 ALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMD--NVFGFNLPVANALLDM 193
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
Y +E A LF+ MP R+++SW ++ GY G + AR F++ ++++ W ++
Sbjct: 194 YTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMI 253
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
V+ + E L LF M +P+ +++++LT CAN+G +D G+WIH Y ++ ++K
Sbjct: 254 NACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMK 313
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
D +L T+L+ MY+KCG ++ + VF M ++ +W ++I G +GQ +ALE+F +M
Sbjct: 314 IDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDM 373
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
++ P+ TFI VLSAC H G+V EG F M+ +Y+IEP+VEHY C+V+LLGRAGL
Sbjct: 374 QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGL 433
Query: 504 MRDSEELVSKLPM--EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
+ ++E L+ +P+ +A P L+GALL+AC H N E+ + + + + E + + +L+S
Sbjct: 434 LDEAERLIGDVPINKDAMP-LFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMS 492
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N+YA+ +W++V +R M ++K G SL+
Sbjct: 493 NVYATASRWEDVIRVRGKMAHPTVKKTAGCSLI 525
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 251/426 (58%), Gaps = 10/426 (2%)
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EGK HARI+K L N+L+ MY G + A K+F W++MI GY
Sbjct: 329 EGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHK-SSEDWSTMILGYS 387
Query: 235 ----KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVV 286
K + + F RE+ E D+ + S+IS VG + + +V
Sbjct: 388 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 447
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N ++D Y K G+VT+ F R R+V+SWN L++ Y + E + LFD+M++
Sbjct: 448 VANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEK 507
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
PN+ + + VL+ACA++ +D G+ IH YI++ + ++ + T+L+ MYAKCG ++ +R
Sbjct: 508 VYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSR 567
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAG 466
+F++ E++V+ WN MI YGMHG E A+E+F ME+ PN TF+ +LSAC H G
Sbjct: 568 KLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTG 627
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
VLEG FD MQ+ Y IEP ++HY ++DLLGR+G + +E LV +P+ +WG+L
Sbjct: 628 HVLEGRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSL 686
Query: 527 LSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELE 586
LSAC H+ E+G +A++ +E +P++ G Y++LS++Y+ G+WDEVE +R +MK++ +E
Sbjct: 687 LSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVE 746
Query: 587 KAVGSS 592
K G S
Sbjct: 747 KRAGWS 752
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 257/583 (44%), Gaps = 42/583 (7%)
Query: 77 HTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLND 136
H+ ++ +G S + F A++++ + S F I D F+ N+I++S D
Sbjct: 30 HSLIITTGNSNNVFFATKLMA-FYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 88
Query: 137 PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRN 196
A FY + M A N +T P++ CA + G +H K G LFV N
Sbjct: 89 YQRAFDFYLQ-MRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLG----LFVGN 143
Query: 197 S-----LIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE-LFDFMP 250
S I+MYS CG V A +F + V D+VTW ++I GYV+N E G + LF+
Sbjct: 144 SAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHR 203
Query: 251 ERDIFTWNSMISGYVDVGDMEAA------NGLF---DLMPFRDVVSWNCMIDGYAKIGNV 301
+ ++ SG+ D++A +GL + F V S ++ Y++ G+
Sbjct: 204 IGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKS--TILSMYSRCGSP 261
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
A CF ++ ++++SW ++A++ + ECL LF M + P+E + +L
Sbjct: 262 EEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGF 321
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
N I G+ H+ I K + +LL+MY K G + A +F + K+ W+
Sbjct: 322 GNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWS 380
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+MI+GY GQ EK + EM G P+ + + V+S+C+ G + G +
Sbjct: 381 TMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKN 440
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
IE V ++D+ G++G + + + + ++ W L+S+ I
Sbjct: 441 SIIE-NVSVANSLMDMYGKSGHVTATWRIFHR-TLQRDVISWNTLISSYKQSGILAEAII 498
Query: 542 VAQHLM--ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK--AVGSSLV--- 594
+ ++ ++ P ++LS A DE E + + +KE E + ++L+
Sbjct: 499 LFDKMVKEKVYPNKVTCIIVLSAC-AHLASLDEGEKIHQYIKENGFESNITIRTALIDMY 557
Query: 595 -HPGEFASESIVENCPPHRKCIV-------YSMLGEIGAQMKM 629
GE + + N R I+ Y M G + + M++
Sbjct: 558 AKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEI 600
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 9/230 (3%)
Query: 58 HPILQKLESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
+ ++ + SCS V + IH + + + ++ A+ ++ S V+ + F
Sbjct: 412 NSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKS-GHVTATWRIFH 470
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ D NT++ S+ A+ ++KM+ + V N T ++ CA + SL
Sbjct: 471 RTLQRDVISWNTLISSYKQSGILAEAI-ILFDKMVKEKVYPNKVTCIIVLSACAHLASLD 529
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG+K+H I + GFE ++ +R +LI MY+ CGE+ +RK+F D++ WN MI Y
Sbjct: 530 EGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYG 589
Query: 235 KNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLM 280
+ V A E+F M E +I T+ S++S G + LFD M
Sbjct: 590 MHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRM 639
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
W HS I +V +T L+ YA + ++F + K++ WNS+I + +G
Sbjct: 28 WFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 87
Query: 432 QGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
++A + +++M PN T V+S C M G
Sbjct: 88 DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHG 127
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 292/532 (54%), Gaps = 18/532 (3%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH L+ SG S D FA + L+ + V+ + FD + E D NTI+ +
Sbjct: 156 EIHGLLVKSGFSLDLFAMTG-LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 135 NDPFGALSFYYEKMMAKFVEHN-HYTFPLLGKVCAGIRSLR---EGKKVHARIVKCGFEL 190
AL +M+ E N +F + V + +LR GK++H ++ GF+
Sbjct: 215 GMARMAL-----EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+ + +L+ MY+ CG + AR++F+ ++V+WNSMID YV+N A +F M
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 251 ERDIFTWNSMISGYV----DVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVT 302
+ + + + G + D+GD+E + +L R+V N +I Y K V
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+A + F ++ R +VSWN ++ + + + L F +M KP+ + +SV+TA A
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+ + +WIH + + + +V ++T+L+ MYAKCG + +AR +FD M+E++V +WN+
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
MI GYG HG G+ ALE+F EM+K PN TF+ V+SAC+H+G+V G F +M+ Y
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
IE ++HYG MVDLLGRAG + ++ + + ++P++ ++GA+L AC H N +
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKA 629
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A+ L EL P D G +VLL+NIY + W++V +R M + L K G S+V
Sbjct: 630 AERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 271/546 (49%), Gaps = 17/546 (3%)
Query: 30 TPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDS 89
T P++ + + ++ +P HP LE CS++KE QI + +GL Q+
Sbjct: 10 TVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEH 69
Query: 90 FAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMM 149
F ++++ C SV + F+ I + +T++K F ++D AL F+ +M
Sbjct: 70 FFQTKLVSLFC-RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFV-RMR 127
Query: 150 AKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL 209
VE Y F L KVC LR GK++H +VK GF LDLF L +MY+ C +V
Sbjct: 128 YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN 187
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD-------IFTWNSMIS 262
+ARKVF+ P DLV+WN+++ GY +N A E+ M E + I + +S
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWN-CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ + +G F +V+ + ++D YAK G++ +AR FD M RNVVSWN
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ YV+ ++ E + +F +M+ KP + S+M L ACA++G ++ G++IH +
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
+ +V + SL++MY KC +D A ++F + + +VSWN+MI+G+ +G+ AL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M R P+ T++ V++A + W ++ R ++ V +VD+ +
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR-SCLDKNVFVTTALVDMYAKC 486
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR--DPGPYVL 559
G + + L+ + E W A++ TH GK + E++ P
Sbjct: 487 GAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGVTF 542
Query: 560 LSNIYA 565
LS I A
Sbjct: 543 LSVISA 548
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 255/451 (56%), Gaps = 35/451 (7%)
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+HA K GF L N+ I Y G V DAR+VF+ P D V++NSMI GY + +
Sbjct: 33 LHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGD 92
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
VG A+ LF+ + TW SM++G+ GD+E+A +F+ MP RD+VSWN MI G
Sbjct: 93 VGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISG---- 148
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
C+ N + E L LF M+ PN +++SVL
Sbjct: 149 -------------CVGNRLP--------------VEALCLFRWMMEEGFVPNRGTVVSVL 181
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+AC G ++ G+W+H +++K R++ D L T+L+ MYAKCG ++LA VF + +N
Sbjct: 182 SACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTC 241
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGP-TPNDATFICVLSACTHAGMVLEGWWYFDL 477
+WN+MI G M+G KAL+MF +ME G P++ TF+ VL AC+HAG V G +F
Sbjct: 242 TWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYT 301
Query: 478 MQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
+ + Y +E +EHY CMVDLL R+G ++++ +L++++PM+ +W ALL C H N +
Sbjct: 302 IPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVK 361
Query: 538 LGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPG 597
+ + V + E+E G +VLLSN+YA+ G+W+ VE++RR M+ K +EK G S V
Sbjct: 362 MAENV---ISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMD 418
Query: 598 EFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
E I + +++ L EIG +M+
Sbjct: 419 GSIHEFISGDKSHPSYDDIHAKLIEIGGRMQ 449
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 12/223 (5%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ + E D N ++ + P AL + M FV + +L C G +
Sbjct: 131 FEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVL-SACTGAGA 189
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L GK VH + K D F+ +L+ MY+ CG V A +VF + TWN+MI+G
Sbjct: 190 LETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMING 249
Query: 233 YVKNREVGFARELFDFMP-----ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS 287
N A ++F M D T+ ++ G ++A F +P + V
Sbjct: 250 LAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVE 309
Query: 288 -----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
+ CM+D A+ G++ A M M+ +VV W LL
Sbjct: 310 LILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLG 352
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 301/569 (52%), Gaps = 12/569 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
QIH ++ G + + ++ L S + + + FD ++ D+ N+++ ++
Sbjct: 224 QIHALVVKLGFETERLVCNSLISMLSKS-GMLRDARVVFDNMENKDSVSWNSMIAGHVIN 282
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
A + +A + H TF + K CA ++ L + +H + +K G + V
Sbjct: 283 GQDLEAFETFNNMQLAG-AKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNV 341
Query: 195 RNSLIHMYSVCGEVLDARKVFE-DGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
+L+ + C E+ DA +F V +V+W +MI GY++N + A LF M
Sbjct: 342 LTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREG 401
Query: 254 I----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+ FT++++++ V E + + ++D + KIGN++ A F+
Sbjct: 402 VKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFE 461
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC-ANMGVID 368
+ ++V++W+ +LA Y + + E ++F ++ R KPNE + S++ AC A ++
Sbjct: 462 LIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVE 521
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ H+Y K R+ + +S+SL+T+YAK G ++ A +F E+++VSWNSMI GY
Sbjct: 522 QGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYA 581
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HGQ +KALE+F EM+KR + TFI V+SAC HAG+V +G YF++M + I P +
Sbjct: 582 QHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTM 641
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EHY CM+DL RAG++ + ++++ +P +W +L+A H N ELGK+ A+ ++
Sbjct: 642 EHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIIS 701
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC 608
LEP+ YVLLSNIYA+ G W E N+R++M ++ ++K G S + + +
Sbjct: 702 LEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDL 761
Query: 609 PPHRKCIVYSMLGEIGAQMKMCRRDVASQ 637
+YS L E+ ++ RDV Q
Sbjct: 762 SHPLSDHIYSKLSELNTRL----RDVGYQ 786
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 206/427 (48%), Gaps = 18/427 (4%)
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
YT + VCAG + G++VH + VKCG L V NSL+ MY+ G V D R+VF++
Sbjct: 103 YTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDE 162
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVDVGDMEAA 273
D+V+WNS++ GY NR ELF M D +T +++I+ + G +
Sbjct: 163 MGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIG 222
Query: 274 NGLFDL---MPFR-DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRC 329
+ L + F + + N +I +K G + AR FD M ++ VSWN ++A +V
Sbjct: 223 MQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVIN 282
Query: 330 KDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLS 389
E F+ M AKP A+ SV+ +CA++ + + + +H K + + +
Sbjct: 283 GQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVL 342
Query: 390 TSLLTMYAKCGVMDLARNVFDNMTE-KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGP 448
T+L+ KC +D A ++F M ++VVSW +MI GY +G ++A+ +F M + G
Sbjct: 343 TALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGV 402
Query: 449 TPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSE 508
PN T+ +L+ HA + E + ++++ Y+ V ++D + G + D+
Sbjct: 403 KPNHFTYSTILTV-QHAVFISE--IHAEVIKTNYEKSSSVG--TALLDAFVKIGNISDAV 457
Query: 509 ELVSKLPMEAGPALWGALLSACSTHSNS-ELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
++ + + A W A+L+ + + E KI H + E P + S I A
Sbjct: 458 KVFELIETKDVIA-WSAMLAGYAQAGETEEAAKIF--HQLTREGIKPNEFTFCSIINACT 514
Query: 568 GKWDEVE 574
VE
Sbjct: 515 APTASVE 521
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/557 (24%), Positives = 245/557 (43%), Gaps = 75/557 (13%)
Query: 38 EPKPKFTDTDNQRLPIVDLS--HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRV 95
+ P+F + P+ DL + +L + C +E + L SGLS DS+ S V
Sbjct: 49 DSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCV 108
Query: 96 LKKLCTSLS--------------------SVSLSVL--------------FFDGIQEPDA 121
L S + SV S++ FD + + D
Sbjct: 109 LSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDV 168
Query: 122 FMCNTIMK--SFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
N+++ S+ ND L + M + ++YT + A ++ G ++
Sbjct: 169 VSWNSLLTGYSWNRFNDQVWEL---FCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQI 225
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA +VK GFE + V NSLI M S G + DAR VF++ D V+WNSMI G+V N +
Sbjct: 226 HALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQD 285
Query: 240 GFARELFDFM------PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS------ 287
A E F+ M P F S+I + ++ GL ++ + + S
Sbjct: 286 LEAFETFNNMQLAGAKPTHATFA--SVIKSCASLKEL----GLVRVLHCKTLKSGLSTNQ 339
Query: 288 --WNCMIDGYAKIGNVTSARNCFDRM-CMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
++ K + A + F M +++VVSW +++ Y++ D + + LF M R
Sbjct: 340 NVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRR 399
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
KPN + ++LT + + + IH+ + K + + T+LL + K G +
Sbjct: 400 EGVKPNHFTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISD 455
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
A VF+ + K+V++W++M+ GY G+ E+A ++F ++ + G PN+ TF +++ACT
Sbjct: 456 AVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTA 515
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGC----MVDLLGRAGLMRDSEELVSKLPMEAGP 520
+E F Y I+ ++ + C +V L + G + + E+ K E
Sbjct: 516 PTASVEQGKQF----HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIF-KRQKERDL 570
Query: 521 ALWGALLSACSTHSNSE 537
W +++S + H ++
Sbjct: 571 VSWNSMISGYAQHGQAK 587
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 14/253 (5%)
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A+ FD+ +R++ N LL Y RC E L LF + R P+ ++ VL+ CA
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+G+ +H KC + + + SL+ MY K G + R VFD M +++VVSWNS+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
+ GY + ++ E+F M+ G P+ T V++A + G V G L + K
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHAL---VVK 231
Query: 484 IEPKVEHYGC--MVDLLGRAGLMRDS---------EELVSKLPMEAGPALWGALLSACST 532
+ + E C ++ +L ++G++RD+ ++ VS M AG + G L A T
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFET 291
Query: 533 HSNSELGKIVAQH 545
+N +L H
Sbjct: 292 FNNMQLAGAKPTH 304
>gi|297851320|ref|XP_002893541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339383|gb|EFH69800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 520
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 267/515 (51%), Gaps = 68/515 (13%)
Query: 143 FYYEKMMAKFVEHNHY-TFPLL--------GKVCAGI-------RSLREGKKVHARIVKC 186
F + + + NHY TFPL K AG + + G+K+HA I+K
Sbjct: 4 FRFTSISPRIFPLNHYSTFPLKQNVSSLSPAKYIAGALQEHINSSAPKAGQKIHADIIKT 63
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
GF DL + L+ ++ CG + AR+VF++ P L +N MI GY+K+ GF +EL
Sbjct: 64 GFIPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH---GFLKELL 120
Query: 247 -------------------------------DFMP----------------ERDIFTWNS 259
MP E D +
Sbjct: 121 LLVQWISYSGEKADGYTLSMVLKASNSLGSNMLMPRSLCRLVHARIIKCDVELDDVLITA 180
Query: 260 MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSW 319
++ YV G +E+A +F+ M +VV MI GY G V A F+ ++++V +
Sbjct: 181 LVDAYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVY 240
Query: 320 NILLALYVRCKDYCE-CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
N ++ + R + + + ++ M R PN ++ SV+ AC+ + ++GQ +H+ I
Sbjct: 241 NAMVEGFSRSAETAKRSVDMYISMQRASFHPNISTFASVIGACSVLTCHEVGQQVHAQIM 300
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K + + + +SLL MYAKCG +D AR VFD M EKNV SW SMI GYG +G E+ALE
Sbjct: 301 KSGVYTHIKMGSSLLDMYAKCGGIDDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALE 360
Query: 439 MFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLL 498
+F M++ PN TF+ VLSAC+H+G+V +G+ F+ MQR Y ++PK+EHY CMVDL+
Sbjct: 361 LFTRMKEFHIEPNYVTFLGVLSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACMVDLM 420
Query: 499 GRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP-RDPGPY 557
GRAG + + E V +P +W ALLS+C+ H N +L I A L +L + PG Y
Sbjct: 421 GRAGELNKAFEFVRAMPERHNSDVWAALLSSCNLHGNVDLASIAASELFKLNADKRPGAY 480
Query: 558 VLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+ LSN+YAS KWD V +R +MK + + K +G S
Sbjct: 481 LALSNVYASNDKWDNVSKIREVMKVRRISKNIGRS 515
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 19/243 (7%)
Query: 100 CTSLSSVSLSVLFFDGIQE-------PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF 152
CTS+ S ++ F + +E D + N +++ F + Y M
Sbjct: 209 CTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSAETAKRSVDMYISMQRAS 268
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDAR 212
N TF + C+ + G++VHA+I+K G + + +SL+ MY+ CG + DAR
Sbjct: 269 FHPNISTFASVIGACSVLTCHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIDDAR 328
Query: 213 KVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF----DFMPERDIFTWNSMISGYVDVG 268
+VF+ ++ +W SMIDGY KN A ELF +F E + T+ ++S G
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFHIEPNYVTFLGVLSACSHSG 388
Query: 269 DMEAANGLFDLMPFRD------VVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNI 321
++ +F+ M RD + + CM+D + G + A M R N W
Sbjct: 389 LVDKGYEIFESMQ-RDYSMKPKMEHYACMVDLMGRAGELNKAFEFVRAMPERHNSDVWAA 447
Query: 322 LLA 324
LL+
Sbjct: 448 LLS 450
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 281/540 (52%), Gaps = 15/540 (2%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
+H L GL L + S S FD I E + N I+ SF
Sbjct: 262 VHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRG 321
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
AL + M+ + + N T + V + + G +VH +K E D+F+
Sbjct: 322 KYMDALDVF-RLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFIS 380
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------ 249
NSLI MY+ G A +F V ++V+WN+MI + +NR A EL M
Sbjct: 381 NSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGET 440
Query: 250 PERDIFTWNSMIS----GYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
P FT N + + G+++VG E + + D+ N + D Y+K G + A+
Sbjct: 441 PNNVTFT-NVLPACARLGFLNVGK-EIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQ 498
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
N F+ + +R+ VS+NIL+ Y R D E LRLF M +P+ S M V++ACAN+
Sbjct: 499 NVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLA 557
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
I G+ IH + + + ++ SLL +Y +CG +DLA VF + K+V SWN+MI+
Sbjct: 558 FIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMIL 617
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
GYGM G+ + A+ +F M++ G + +F+ VLSAC+H G++ +G YF +M + IE
Sbjct: 618 GYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDL-NIE 676
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P HY CMVDLLGRAGLM ++ +L+ L + +WGALL AC H N ELG A+H
Sbjct: 677 PTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEH 736
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
L EL+P+ G Y+LLSN+YA +WDE +R +MK + +K G S V G+ +V
Sbjct: 737 LFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLV 796
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 169/634 (26%), Positives = 287/634 (45%), Gaps = 57/634 (8%)
Query: 27 LPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHP--ILQKLESCSTVKEFHQIHTQLLVSG 84
LP L N F T Q S+P +LQ C T+ + Q+H L+ G
Sbjct: 11 LPSITTPLTKNTHFSSFFSTSLQT------SNPPNLLQLCTLCDTLSQTKQVHAYSLLHG 64
Query: 85 L--SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMK--SFLMLNDPFGA 140
S AS +L+ S SL + AF+ NT+++ S + D FG
Sbjct: 65 FLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVFDGFGT 124
Query: 141 LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH 200
Y M+ V+ + T+P + KVC+ +R+G++VH K GF+ D+FV N+L+
Sbjct: 125 ----YNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLA 180
Query: 201 MYSVCGEVLDARKVFEDGPVWDLVTWNSMI-----DGYVKNREVGFARELFDFMP--ERD 253
Y CG DA KVF++ P D V+WN++I G+ + +GF R + P + D
Sbjct: 181 FYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYE-EALGFFRVMVAAKPGIQPD 239
Query: 254 IFTWNSMISGYVDVGDMEAAN-----GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
+ T S++ + D A L + V N ++D Y K G+ +++ F
Sbjct: 240 LVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVF 299
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
D + RNV+SWN ++ + Y + L +F MI +PN ++ S+L +G+
Sbjct: 300 DEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFK 359
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
+G +H + K I+ DV +S SL+ MYAK G +A +F+ M +N+VSWN+MI +
Sbjct: 360 LGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFA 419
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
+ +A+E+ +M+ +G TPN+ TF VL AC G + G ++ RI ++ +
Sbjct: 420 RNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGK---EIHARIIRVGSSL 476
Query: 489 EHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+ + + D+ + G + ++ + + + + +L + +N L +
Sbjct: 477 DLFVSNALTDMYSKCGCLNLAQNVFN---ISVRDEVSYNILIIGYSRTNDSLESLRLFSE 533
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
M L P +I + G NL I + KE+ + L H F + S+++
Sbjct: 534 MRLLGMRP-------DIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLD 586
Query: 607 NCPPHRKCIVYSMLGEIGAQMKMC----RRDVAS 636
+Y+ G I K+ +DVAS
Sbjct: 587 ---------LYTRCGRIDLATKVFYCIQNKDVAS 611
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 251/424 (59%), Gaps = 13/424 (3%)
Query: 193 FVRNSLIHMYSVCGEVLDA----RKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL--- 245
++ N++ +Y+ L A R + GP D T+ ++ + +EL
Sbjct: 54 YLYNTMFRVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQ 113
Query: 246 -FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA 304
F +F NS+I Y M++A +FD M +RD+ SW ++ YA +V +A
Sbjct: 114 ALKFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAA 173
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANM 364
R FD M R+V+S++ ++A YVR + E L LF + +P+++ +MSVL ACAN+
Sbjct: 174 RKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANL 233
Query: 365 GVIDIGQWIHSYIQKCRIKPDVL---LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
G +D+G+W++SY+ C+ K D + ++T+L+ M+ KCG ++ A VF+ EK+V W
Sbjct: 234 GALDVGRWVYSYV--CQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWT 291
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
+M+ G MHG GE+ +E F +M G PN TF+ +LS C+H+G+V EG +YFD M+
Sbjct: 292 AMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESD 351
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
+ +EP VEH+GC+VDLLGRAGL+ + +L+S++P E A+WG+LL+AC + N E+G++
Sbjct: 352 FGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGEL 411
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFAS 601
AQ L++ EP + Y+ L ++Y G+WDEVE ++ MKE K G SL+ G
Sbjct: 412 AAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICY 471
Query: 602 ESIV 605
E +V
Sbjct: 472 EFVV 475
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 211/471 (44%), Gaps = 63/471 (13%)
Query: 70 VKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL--SVLFFDGIQEPDAFMCNTI 127
++E ++H L+ SGL Q R L L TS SS SL + L FD I P ++ NT+
Sbjct: 1 MQEAKRLHAHLITSGLHQQE-NHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTM 59
Query: 128 MKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG 187
+ + P AL + M+ + YTFP L K C+ + L +G+++H + +K G
Sbjct: 60 FRVYAASPTPLHAL-LLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFG 118
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
+FV NSLIH+Y + AR+VF+ D+ +W +++ Y + V AR++FD
Sbjct: 119 LGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFD 178
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLF-DLMPFR---------------------DV 285
MPER + ++++MI+ YV A LF +L + DV
Sbjct: 179 EMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDV 238
Query: 286 VSW------------------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
W +ID + K G++ A F+ ++V W +L+
Sbjct: 239 GRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLA 298
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQK-CRIKPDV 386
+ + F++M+ KPN + +++L+ C++ G+++ G + ++ ++P V
Sbjct: 299 MHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTV 358
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMT-EKNVVSWNSMIMGYGMHGQ---GEKALEMFME 442
++ + + G++D A + M E N W S++ ++ GE A + ++
Sbjct: 359 EHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQWLIK 418
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
E N A ++ +LS AG W + K++ K++ GC
Sbjct: 419 DEPW----NGALYMTLLSLYREAGR----W------DEVEKVKLKMKEVGC 455
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 293/553 (52%), Gaps = 15/553 (2%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H L GL + S S L +S + FD + E D N ++ S L
Sbjct: 88 QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAML-SGLCR 146
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
N + +M+ + V + T + +C + +H VK G + +LFV
Sbjct: 147 NARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFV 206
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP---- 250
N+LI +Y G + +A+ VF DLVTWNS+I G + + A ++F M
Sbjct: 207 CNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGV 266
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-----DVVSWNCMIDGYAKIGNVTSAR 305
D+ T S+ S GD +A L + R D+++ N ++D YAK+ N+ +A+
Sbjct: 267 SPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQ 326
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSVLTACANM 364
FD M +++ VSWN L+ Y++ E + + M + + K + + +SVL A +++
Sbjct: 327 RMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHL 386
Query: 365 GVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMI 424
G + G +H+ K + DV + T L+ +YAKCG + A +F+ M ++ WN++I
Sbjct: 387 GALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAII 446
Query: 425 MGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKI 484
G G+HG G +AL +F M++ G P+ TF+ +L+AC+HAG+V +G +FD+MQ Y I
Sbjct: 447 SGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDI 506
Query: 485 EPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQ 544
P +HY CM D+LGRAG + ++ + +P++ A+WGALL AC H N E+GK+ +Q
Sbjct: 507 VPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 566
Query: 545 HLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE----FA 600
+L EL+P + G YVL+SN+YA GKWD V+ +R +++ + L+K G S + F
Sbjct: 567 NLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFY 626
Query: 601 SESIVENCPPHRK 613
S + E P H +
Sbjct: 627 SGNQTEPHPQHEE 639
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 242/422 (57%), Gaps = 40/422 (9%)
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
+REGK H IV+ + LD V N+L+ MY G + A K
Sbjct: 352 VREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEK------------------- 392
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
LFD + E +WN+M+ GYV ++ + DV N +I
Sbjct: 393 ------------LFDGVHEWSKESWNTMVFGYVHCYIIKNSVD-------EDVSIANSLI 433
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
D Y K GN++ A F R R+VV+WN L++ Y Y E + LFD MI PN A
Sbjct: 434 DMYGKGGNLSIAWKMFCRT-QRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSA 492
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+L+ VL+AC ++ ++ G+ +H YI++ + +V L T+L+ MYAKCG ++ +R +F++M
Sbjct: 493 TLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSM 552
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
EK+V+SWN MI GYG+HG A+E+F +ME+ PN TF+ +LSACTHAG V EG
Sbjct: 553 KEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGK 612
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
FD MQ Y I+P ++H+ CM DLLGR+G ++++E+LV +P+ +WG LLSAC
Sbjct: 613 QLFDRMQ-YYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKI 671
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H+ E+G VA+ +E +P + G Y++LSN+Y S GKWDE E R +MKE+ + K G S
Sbjct: 672 HNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWS 731
Query: 593 LV 594
V
Sbjct: 732 AV 733
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/576 (25%), Positives = 238/576 (41%), Gaps = 82/576 (14%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
T++ H+ H ++ +G + + F +S+++ L S S FD + D F+ N+I+
Sbjct: 44 TLQSLHKSHALIITTGNANNVFISSKLIS-LYASFRKPHSSTYVFDSTNQKDTFLWNSII 102
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG- 187
KS + F A FY + M N +T P++ CA + L EGK +H + K G
Sbjct: 103 KSHFSNGNYFKAFDFYIQ-MRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGL 161
Query: 188 FELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD 247
F + V +S ++MY+ CG + DA +F++ V D+V+W +++ GYV N + E
Sbjct: 162 FAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLC 221
Query: 248 FMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR-------------DVVSWNCMIDG 294
M R I ++ G +A L ++ R V + ++
Sbjct: 222 EM--RRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSM 279
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y+K GNV A N F ++ ++V SW ++ + R ECL LF M D P+ +
Sbjct: 280 YSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVV 339
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+L N ++ G+ H I + D ++ +LL+MY K G ++ A +FD + E
Sbjct: 340 SCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHE 399
Query: 415 KNVVSWNSMIMGY---------------------GMHGQG-------------------- 433
+ SWN+M+ GY M+G+G
Sbjct: 400 WSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVVTW 459
Query: 434 -------------EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
+A+ +F EM PN AT + VLSAC H + +G ++
Sbjct: 460 NTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKE 519
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
E V +VD+ + G + S EL + + E W ++S H ++
Sbjct: 520 -GGFELNVSLGTALVDMYAKCGQLEQSRELFNSMK-EKDVISWNVMISGYGLHGDANSAM 577
Query: 541 IVAQHLMELEPRDPGPYVLLSNI-------YASEGK 569
V Q ME P LS + Y EGK
Sbjct: 578 EVFQQ-MEQSNVKPNAITFLSLLSACTHAGYVDEGK 612
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 165/356 (46%), Gaps = 21/356 (5%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
++L+ K HA I+ G ++F+ + LI +Y+ + + VF+ D WNS+I
Sbjct: 43 QTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSII 102
Query: 231 DGYVKNREVGFARELFDFMPER-------DIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
+ N G + FDF + + FT +++ ++ +E + L+
Sbjct: 103 KSHFSN---GNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKS 159
Query: 284 DVVSWNCMIDG-----YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY---CEC 335
+ + N + YAK G + A FD + +R+VVSW L+ YV D EC
Sbjct: 160 GLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLEC 219
Query: 336 LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTM 395
L R+ K N +L AC N+G + G+ +H K + ++ +SLL+M
Sbjct: 220 LCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSM 279
Query: 396 YAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATF 455
Y+KCG ++ A N F + +K+V SW S+I G + L +F +M+ P+
Sbjct: 280 YSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVV 339
Query: 456 ICVLSACTHAGMVLEGWWYFDLM-QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
C+L ++ MV EG + L+ +R Y ++ V + ++ + + G + +E+L
Sbjct: 340 SCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNN--ALLSMYCKFGTLNPAEKL 393
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ D NT++ S+ A++ + ++M+++ + N T ++ C + SL +GK
Sbjct: 453 QRDVVTWNTLISSYTHSGHYAEAITLF-DEMISEKLNPNSATLVIVLSACCHLPSLEKGK 511
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNR 237
VH I + GFEL++ + +L+ MY+ CG++ +R++F D+++WN MI GY +
Sbjct: 512 MVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHG 571
Query: 238 EVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDV----VSWN 289
+ A E+F M + ++ T+ S++S G ++ LFD M + + +
Sbjct: 572 DANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHFA 631
Query: 290 CMIDGYAKIGNVTSARNCFDRM 311
CM D + GN+ A + M
Sbjct: 632 CMADLLGRSGNLQEAEDLVQSM 653
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 284/513 (55%), Gaps = 46/513 (8%)
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CN ++++ ++ YY+ + A+ + + +T+P + + ++ EG+K HA
Sbjct: 17 CNVLIRTLARRGSFARVMAVYYD-LRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAA 75
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV--------- 234
VK GF D + +SL+ MY++ G V ARKVF++ P LV WN M+ Y+
Sbjct: 76 VKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAV 135
Query: 235 --------------------------KNREVGFARELFDFMPERDIFTW-----NSMISG 263
+ R++ R + +M ++F + N+++
Sbjct: 136 ALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMD--NVFGFNLPVANALLDM 193
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILL 323
Y +E A LF+ MP R+++SW ++ GY G + AR F++ ++++ W ++
Sbjct: 194 YTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMI 253
Query: 324 ALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK 383
V+ + E L LF M +P+ +++++LT CAN+G +D G+WIH Y ++ ++K
Sbjct: 254 NACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMK 313
Query: 384 PDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEM 443
D +L T+L+ MY+KCG ++ + VF M ++ +W ++I G +GQ +ALE+F +M
Sbjct: 314 IDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDM 373
Query: 444 EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGL 503
++ P+ TFI VLSAC H G+V EG F M+ +Y+IEP+VEHY C+V+LLGRAGL
Sbjct: 374 QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGL 433
Query: 504 MRDSEELVSKLPM--EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
+ ++E L+ +P+ +A P L+GALL+AC H N E+ + + + + E + + +L+S
Sbjct: 434 LDEAERLIGDVPINKDAMP-LFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMS 492
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N+YA+ +W++V +R M ++K G SL+
Sbjct: 493 NVYATASRWEDVIRVRGKMAHPTVKKNAGCSLI 525
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 273/494 (55%), Gaps = 17/494 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ ++ D NT+M + AL ++E A + T+ + K+CA ++
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR-ATMGKMTQSTYATVIKLCANLKQ 317
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-DGPVWDLVTWNSMID 231
L +++H+ ++K GF L V +L YS CGE+ DA +F ++V+W ++I
Sbjct: 318 LALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377
Query: 232 GYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDV----GDMEAANGLFDLMPFR 283
G ++N ++ A LF M E + FT+++M+ + + + + +PF
Sbjct: 378 GCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFV 437
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
++ Y+K G+ A + F + ++VV+W+ +L+ + + D LF++M
Sbjct: 438 GTA----LLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMA 493
Query: 344 RGDAKPNEASLMSVLTACA--NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
KPNE ++ SV+ ACA + GV D G+ H+ K R + +S++L++MY++ G
Sbjct: 494 IQGIKPNEFTISSVIDACACPSAGV-DQGRQFHAISIKYRYHDAICVSSALVSMYSRKGN 552
Query: 402 MDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
+D A+ VF+ T++++VSWNSMI GY HG KA+E F +ME G + TF+ V+
Sbjct: 553 IDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMG 612
Query: 462 CTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA 521
CTH G+V+EG YFD M R +KI P +EHY CMVDL RAG + ++ L+ +P AG
Sbjct: 613 CTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAM 672
Query: 522 LWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMK 581
+W LL AC H N ELGK A L+ LEP D YVLLSNIYA+ GKW E + +R++M
Sbjct: 673 VWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMD 732
Query: 582 EKELEKAVGSSLVH 595
++++K G S +
Sbjct: 733 YRKVKKEAGCSWIQ 746
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 223/485 (45%), Gaps = 18/485 (3%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L++C +V + Q+H + G + +A L + SV + F+G+ + +
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKN 165
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+++ ++ ++ +M A+ + N +TF + A +L G++VH
Sbjct: 166 VVTWTSLLTGCAHAQMHSEVMALFF-RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVH 224
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
A+ VK G +FV NSL++MY+ CG V DA+ VF D+V+WN+++ G N
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECEL 284
Query: 241 FARELFD----FMPERDIFTWNSMISGYVDVGDMEAANGLFD-LMPFRDVVSWNCMI--- 292
A +LF M + T+ ++I ++ + A L ++ ++ N M
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALA 344
Query: 293 DGYAKIGNVTSARNCFDRMC-MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
D Y+K G + A N F RNVVSW +++ ++ D + LF RM PNE
Sbjct: 345 DAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNE 404
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
+ ++L A ++ + IH+ + K + + T+LL Y+K G + A ++F
Sbjct: 405 FTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKM 460
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ +K+VV+W++M+ + G E A +F +M +G PN+ T V+ AC ++
Sbjct: 461 IEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ 520
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F + Y+ + +V + R G + DS ++V + + W +++S +
Sbjct: 521 GRQFHAISIKYRYHDAICVSSALVSMYSRKGNI-DSAQIVFERQTDRDLVSWNSMISGYA 579
Query: 532 THSNS 536
H S
Sbjct: 580 QHGYS 584
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
+V + ++D Y K G+V F+ M +NVV+W LL + + E + LF RM
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
PN + SVL+A A+ G +D+GQ +H+ K + V + SL+ MYAKCG+++
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
A++VF+ M +++VSWN+++ G ++ +AL++F E +T+ V+ C
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 464 H-AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+ + L + +++ + + V + D + G + D+ + S
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVS 371
Query: 523 WGALLSACSTHSNSELGKIVAQHLME 548
W A++S C + + L ++ + E
Sbjct: 372 WTAIISGCIQNGDIPLAVVLFSRMRE 397
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 304 ARNCFDRMCMRNV-VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
AR D + R+ V N +L Y R E L F RG + A+L VL AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 363 NMGVIDIGQWIHSYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
++ +G+ +H KC + +V TSL+ MY KCG + VF+ M +KNVV+W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
S++ G + + +F M G PN TF VLSA G + DL QR+
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL-------DLGQRV 223
Query: 482 YKIEPKVEHYGC---------MVDLLGRAGLMRDSEEL 510
+ K +GC ++++ + GL+ D++ +
Sbjct: 224 HAQSVK---FGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 296/546 (54%), Gaps = 25/546 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H L G +SF + L + + ++ S + + D NT++ S L
Sbjct: 219 QVHAYGLRKG-ELNSFIIN-TLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSS-LCQ 275
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLF 193
N+ F Y +M+ + VE + +T + C+ + LR GK++HA +K G + + F
Sbjct: 276 NEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 335
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V ++L+ MY C +VL +VF+ + WN+MI GY +N A LF M E
Sbjct: 336 VGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESA 395
Query: 254 IFTWNSM-ISGYVDV-------GDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
NS ++G V EA +G RD N ++D Y+++G + A
Sbjct: 396 GLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIA 455
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF-----------DRMIRGDAKPNEAS 353
+ F +M R++V+WN ++ YV + + + L + +R R KPN +
Sbjct: 456 KRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSIT 515
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
LM++L +CA + + G+ IH+Y K + DV + ++L+ MYAKCG + ++R VFD +
Sbjct: 516 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 575
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+NV++WN ++M YGMHG + A++M M +G PN+ TFI V +AC+H+GMV EG
Sbjct: 576 IRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLK 635
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA-LWGALLSACST 532
F M++ Y +EP +HY C+VDLLGRAG ++++ +L++ +P A W +LL AC
Sbjct: 636 IFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRI 695
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H+N E+G+I AQ+L++LEP YVLL+NIY+S G W + +RR MK + + K G S
Sbjct: 696 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCS 755
Query: 593 LVHPGE 598
+ G+
Sbjct: 756 WIEHGD 761
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 171/340 (50%), Gaps = 23/340 (6%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD-LFVRNSLIHMYS 203
Y M+ ++ +++ FP L K A ++ + GK++HA + K G+ +D + V N+L+++Y
Sbjct: 81 YIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYR 140
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG+ KVF+ + V+WNS+I + A E F M + D+ FT S
Sbjct: 141 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVS 200
Query: 260 ---------MISGYVDVGDMEAANGLF--DLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
M G + +G A GL +L F N ++ Y K+G + S++
Sbjct: 201 VALACSNFPMPEGLL-MGKQVHAYGLRKGELNSF----IINTLVAMYGKMGKLASSKVLL 255
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVID 368
R++V+WN +L+ + + + E L M+ +P+ ++ SVL AC+++ ++
Sbjct: 256 GSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLR 315
Query: 369 IGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
G+ +H+Y ++ + + + ++L+ MY C + VFD M ++ + WN+MI GY
Sbjct: 316 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGY 375
Query: 428 GMHGQGEKALEMFMEMEKR-GPTPNDATFICVLSACTHAG 466
+ E+AL +F+EME+ G N T V+ AC +G
Sbjct: 376 AQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG 415
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 208/491 (42%), Gaps = 36/491 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
QIH + G DS + L L FD I E + N+++ S
Sbjct: 114 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 173
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI---RSLREGKKVHARIVKCGFELD 191
AL + M+ + VE + +T + C+ L GK+VHA ++ G EL+
Sbjct: 174 EKWEMALE-AFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELN 231
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFARELFD 247
F+ N+L+ MY G++ ++ + DLVTWN+++ +N + + + RE+
Sbjct: 232 SFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVL 291
Query: 248 FMPERDIFTWNS---------MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
E D FT +S M+ ++ NG D F + ++D Y
Sbjct: 292 EGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG----SALVDMYCNC 347
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSV 357
V S FD M R + WN ++ Y + + E L LF M N ++ V
Sbjct: 348 KQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGV 407
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+ AC G + IH ++ K + D + +L+ MY++ G +D+A+ +F M ++++
Sbjct: 408 VPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDL 467
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEME-----------KRGPTPNDATFICVLSACTHAG 466
V+WN++I GY + E AL M +M+ + PN T + +L +C
Sbjct: 468 VTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALS 527
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ +G + + V +VD+ + G ++ S ++ ++P+ W +
Sbjct: 528 ALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVI 585
Query: 527 LSACSTHSNSE 537
+ A H NS+
Sbjct: 586 VMAYGMHGNSQ 596
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 11/228 (4%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLM-----PFRDVVSWNCMIDGYAKIGNVTSARNC 307
D F + +++ D+ DM+ + + V N +++ Y K G+ +
Sbjct: 92 DNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 151
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FDR+ RN VSWN L++ + + L F M+ D +P+ +L+SV AC+N +
Sbjct: 152 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMP 211
Query: 368 D---IGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ +G+ +H+Y ++K + ++ +L+ MY K G + ++ + + +++V+WN++
Sbjct: 212 EGLLMGKQVHAYGLRKGELNSFII--NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTV 269
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ + Q +ALE EM G P+ T VL AC+H M+ G
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTG 317
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W LL VR E + + MI KP+ + ++L A A++ +D+G+ IH+++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 379 KCRIKPD-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K D V ++ +L+ +Y KCG VFD ++E+N VSWNS+I + E AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGM 467
E F M P+ T + V AC++ M
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPM 210
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 288/532 (54%), Gaps = 21/532 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
F+ + E +A ++ + A+ + + + + + E + +T + CA +
Sbjct: 228 FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGY-EPDRFTLSGVISACANMEL 286
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L G+++H++ ++ G LD V LI+MY+ C G + ARK+F+ ++ +W +M
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 230 IDGYVKNREVGFARELFDF---------MPERDIFTWNSMISGYVDVGDMEAANGLFDLM 280
I GYV+ + G+ E D +P FT++S + ++ + +F
Sbjct: 347 ITGYVQ--KGGYDEEALDLFRGMILTHVIPNH--FTFSSTLKACANLAALRIGEQVFTHA 402
Query: 281 PFRDVVSWNC----MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
S NC +I YA+ G + AR FD + +N++S+N ++ Y + + E L
Sbjct: 403 VKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEAL 462
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LF+ + + + S+L+ A++G I G+ IH+ + K +K + + +L++MY
Sbjct: 463 ELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY 522
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
++CG ++ A VF++M ++NV+SW S+I G+ HG +ALE+F +M + G PN+ T+I
Sbjct: 523 SRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYI 582
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSAC+H G+V EGW +F M + + P++EHY C+VD+LGR+G + ++ + ++ +P
Sbjct: 583 AVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPY 642
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
+A +W L AC H N ELGK A+ ++E EP DP Y+LLSN+YAS KWDEV N+
Sbjct: 643 KADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNI 702
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
R+ MKEK L K G S V + V + + +Y L + ++K
Sbjct: 703 RKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK 754
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 226/501 (45%), Gaps = 30/501 (5%)
Query: 57 SHPILQK----LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLS 109
SHP LQ L+ C + F +H +L S L DS + ++ +
Sbjct: 62 SHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKAT 121
Query: 110 VLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG 169
+F D + ++ F N F AL + M+ N Y F + C+
Sbjct: 122 SIFRLMGSSRDLISWSAMVSCFANNNMGFRAL-LTFVDMIENGYYPNEYCFAAATRACST 180
Query: 170 IRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVC-GEVLDARKVFEDGPVWDLVTWN 227
+ G + ++K G+ + D+ V LI M+ G+++ A KVFE P + VTW
Sbjct: 181 AEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWT 240
Query: 228 SMIDGYVKNREVGFARELFDFMP----ERDIFTWNSMISGYVD-----VGDMEAANGLFD 278
MI ++ G A +LF M E D FT + +IS + +G + +
Sbjct: 241 LMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300
Query: 279 LMPFRDVVSWNCMIDGYAKI---GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC-E 334
+ V C+I+ YAK G++ +AR FD++ NV SW ++ YV+ Y E
Sbjct: 301 GLTLDRCVGC-CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEE 359
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
L LF MI PN + S L ACAN+ + IG+ + ++ K ++ SL++
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYA+ G +D AR FD + EKN++S+N++I Y + E+ALE+F E+E +G + T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC--MVDLLGRAGLMRDSEELVS 512
F +LS G + +G + R+ K K+ C ++ + R G + + ++
Sbjct: 480 FASLLSGAASIGTIGKGE---QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536
Query: 513 KLPMEAGPALWGALLSACSTH 533
+ + W ++++ + H
Sbjct: 537 DME-DRNVISWTSIITGFAKH 556
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 185/400 (46%), Gaps = 29/400 (7%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFE-D 217
T+ L K C RS G VH ++ + +LD NSLI +YS CG+ A +F
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLM 127
Query: 218 GPVWDLVTWNSMIDGYVKNREVGFARELFDFM--------PERDIF---TWNSMISGYVD 266
G DL++W++M+ + N +GF R L F+ P F T + +V
Sbjct: 128 GSSRDLISWSAMVSCFANNN-MGF-RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVS 185
Query: 267 VGDMEAANGLFDLMPFRDVVSWNCMIDGYAK-IGNVTSARNCFDRMCMRNVVSWNILLAL 325
VGD + DV +ID + K G++ SA F++M RN V+W +++
Sbjct: 186 VGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
++ E + LF MI +P+ +L V++ACANM ++ +GQ +HS + + D
Sbjct: 246 LMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 386 VLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKALEMFM 441
+ L+ MYAKC G M AR +FD + + NV SW +MI GY G E+AL++F
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC----MVDL 497
M PN TF L AC + + G F + ++ C ++ +
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISM 420
Query: 498 LGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
R+G + D+ + L E + ++ A + + NSE
Sbjct: 421 YARSGRIDDARKAFDIL-FEKNLISYNTVIDAYAKNLNSE 459
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ + + M+ + P+ + L C DIG +H + + ++ D + SL+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 394 TMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
++Y+KCG + A ++F M + ++++SW++M+ + + G +AL F++M + G PN+
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC-MVDLL--GRAGLMRDSEE 509
F AC+ A V G F + + ++ V GC ++D+ GR L+ + +
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDV-CVGCGLIDMFVKGRGDLV-SAFK 226
Query: 510 LVSKLPMEAGPALWGALLS 528
+ K+P E W +++
Sbjct: 227 VFEKMP-ERNAVTWTLMIT 244
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 233/378 (61%), Gaps = 2/378 (0%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D + ++ Y GD+ +A +FD MP R +VS MI YAK GNV +AR FD MC
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQ 371
R++VSWN+++ Y + + L LF +++ G KP+E ++++ L+AC+ +G ++ G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
WIH +++ RI+ +V + T L+ MY+KCG ++ A VF++ K++V+WN+MI GY MHG
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 432 QGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
+ AL +F EM+ G P D TFI L AC HAG+V EG F+ M + Y I+PK+EH
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGC+V LLGRAG ++ + E + + M+A LW ++L +C H + LGK +A++L+ L
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLN 459
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
++ G YVLLSNIYAS G ++ V +R +MKEK + K G S + E +
Sbjct: 460 IKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREH 519
Query: 611 HRKCIVYSMLGEIGAQMK 628
+ +Y+ML +I ++K
Sbjct: 520 SKSKEIYTMLRKISERIK 537
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 197/452 (43%), Gaps = 61/452 (13%)
Query: 30 TPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKL----ESCSTVKEFHQIHTQLLVSGL 85
+ P L + P+ + + T R + P +KL + +V E QIH +L L
Sbjct: 3 SSPLLATSLPQNQLSTTATARFRL-----PPPEKLAVLIDKSQSVDEVLQIHAAILRHNL 57
Query: 86 SQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF 143
LK + S + S+ F +PD F+ + + +N
Sbjct: 58 LLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFL 116
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y ++++ + N +TF L K C S + GK +H ++K G +D +V L+ +Y+
Sbjct: 117 LYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYA 172
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISG 263
G+V+ A+KVF+ P LV+ +MI Y K V AR LFD M ERDI +WN MI G
Sbjct: 173 KGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDG 232
Query: 264 YVDVGDMEAANGLFDLM-----PFRDVVS------------------W------------ 288
Y G A LF + P D ++ W
Sbjct: 233 YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 289 -----NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM- 342
+ID Y+K G++ A F+ +++V+WN ++A Y + LRLF+ M
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 343 -IRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIKPDVLLSTSLLTMYAKCG 400
I G +P + + + L ACA+ G+++ G I S Q+ IKP + L+++ + G
Sbjct: 353 GITG-LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAG 411
Query: 401 VMDLARNVFDNMT-EKNVVSWNSMIMGYGMHG 431
+ A NM + + V W+S++ +HG
Sbjct: 412 QLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 264/520 (50%), Gaps = 83/520 (15%)
Query: 158 YTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFED 217
+TFPL+ + CA + S GK +H +++ GF+ L V N LI MY+ G + DAR +F+
Sbjct: 43 FTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDR 102
Query: 218 GPV-----WD------------------------------LVTWNSMIDGYVKNREVGFA 242
V W+ LVTW S+I Y ++ A
Sbjct: 103 MSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEA 162
Query: 243 RELFDFMPERDI---------------------------------------FTWNSMISG 263
ELF M + + F +++I
Sbjct: 163 MELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICV 222
Query: 264 YVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM-----CMR---N 315
Y GD+ A LF M + + SWN +I +A+ G A F ++ C R N
Sbjct: 223 YGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPN 282
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VVSW+ ++ + E L LF RM N ++ +VL+ CA + + +G+ IH
Sbjct: 283 VVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHG 342
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
++ + + ++L+ L+ MYAKCG + +F+ K+++SWNSMI GYGMHG G
Sbjct: 343 HVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMN 402
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
ALE F +M K G P+ TF+ VLS+C+H+G+V EG FD M + Y+IEP++EHY CMV
Sbjct: 403 ALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMV 462
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD-P 554
DLLGRAGL+R++ E+V +P+ +WGALL++C H+N+E+ + A HL L R+
Sbjct: 463 DLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETT 522
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
G Y+LLSNIYA+ G+W++ +R K K L+K G S +
Sbjct: 523 GTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWI 562
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P+ + I+ F AL + AK + N T + +CA + +L G++
Sbjct: 281 PNVVSWSAIIDGFASKGREKEALELFRRMQHAKILA-NAVTISTVLSLCAELAALHLGRE 339
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H +V+ ++ V N L++MY+ CG + + +FE DL++WNSMI GY +
Sbjct: 340 IHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGL 399
Query: 239 VGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLM--PFR---DVVSWN 289
A E FD M + D T+ +++S G + LFD M +R + +
Sbjct: 400 GMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYA 459
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILL 323
CM+D + G + A M + N W LL
Sbjct: 460 CMVDLLGRAGLLREASEIVKNMPVAPNACVWGALL 494
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 294/542 (54%), Gaps = 41/542 (7%)
Query: 64 LESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C++V Q H+ + +G++ D +L L S + + FF + D
Sbjct: 359 LSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLD-LYVKCSDIKTAHEFFLCYGQLD 417
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+ KSF + + +M + + N +T+P + K C + + G+++H
Sbjct: 418 -----NLNKSFQI-----------FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIH 461
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+++K GF+ +++V + LI MY+ G++ A K+F D+V+W +MI GY ++ +
Sbjct: 462 TQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFT 521
Query: 241 FARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFD---LMPFRDVVS-WNCMI 292
A LF M ++ I + N S IS + ++ + L + D +S N ++
Sbjct: 522 EALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALV 581
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
YA+ G V A FD++ ++ VSWN L++ + + + E L +F +M + + N
Sbjct: 582 SLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSF 641
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ S ++A AN+ + IG+ IH I+K + +S +L+T+YAKCG +D
Sbjct: 642 TFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTID--------- 692
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+SWNSMI GY HG G +AL++F +M++ PN TF+ VLSAC+H G+V EG
Sbjct: 693 ----DISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGI 748
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
YF M + + PK EHY C+VDLLGR+GL+ ++ V ++P++ +W LLSAC+
Sbjct: 749 SYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNV 808
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H N ++G+ A HL+ELEP+D YVL+SN+YA GKWD + R++MK++ ++K G S
Sbjct: 809 HKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRS 868
Query: 593 LV 594
V
Sbjct: 869 WV 870
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 200/479 (41%), Gaps = 79/479 (16%)
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y M V N TF L + C RS +G K LI Y
Sbjct: 68 YLHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGLK-------------------LIDFYL 108
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD------IF-- 255
G++ A VF++ P+ L WN + + ++ R +G LF M ++ IF
Sbjct: 109 AFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAV 168
Query: 256 -----TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
+ N++ +V+ + F+ F N +ID Y K G ++SA+ F+
Sbjct: 169 VLRGCSGNAVSFRFVEQIHAKTITSGFESSTF----ICNPLIDLYFKNGFLSSAKKVFEN 224
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+ R+ VSW +++ + E + LF ++ VL+AC + + G
Sbjct: 225 LKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFG 270
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H + K + + +L+T+Y++ G + A +F M++++ VS+NS+I G
Sbjct: 271 KQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQ 330
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY---------------- 474
G +AL +F +M P+ T +LSAC G + G +
Sbjct: 331 GYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVE 390
Query: 475 ---FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA---GPALWGALLS 528
DL + I+ E + C G+ + S ++ +++ +E + ++L
Sbjct: 391 GSLLDLYVKCSDIKTAHEFFLCY----GQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILK 446
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYV--LLSNIYASEGKWDEVENLRRIMKEKEL 585
C+T ++LG+ + +++ + YV +L ++YA GK D + R +KE ++
Sbjct: 447 TCTTLGATDLGEQIHTQVLKTGFQ-FNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 504
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/491 (34%), Positives = 270/491 (54%), Gaps = 10/491 (2%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + + D N+++ ++ L + E+M+ + + T + C+
Sbjct: 207 LFDELGDRDVISWNSMISGYVSNGLSEKGLDLF-EQMLLLGINTDLATMVSVVAGCSNTG 265
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
L G+ +H +K F +L + N L+ MYS G + A +VFE +V+W SMI
Sbjct: 266 MLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIA 325
Query: 232 GYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFDLMPFR---- 283
GY + + LF M + DIFT +++ G +E + + +
Sbjct: 326 GYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQS 385
Query: 284 DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMI 343
D+ N ++D YAK G++ A + F M ++++VSWN ++ Y + E L LF M
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM- 444
Query: 344 RGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMD 403
+ ++KPN ++ +L ACA++ ++ GQ IH +I + D ++ +L+ MY KCG +
Sbjct: 445 QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 504
Query: 404 LARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACT 463
LAR +FD + EK++VSW MI GYGMHG G +A+ F EM G P++ +FI +L AC+
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564
Query: 464 HAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALW 523
H+G++ EGW +F++M+ IEPK EHY C+VDLL RAG + + + + +P+E +W
Sbjct: 565 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 624
Query: 524 GALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEK 583
GALL C + + +L + VA+H+ ELEP + G YVLL+NIYA KW+EV+ LR + +
Sbjct: 625 GALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 684
Query: 584 ELEKAVGSSLV 594
L K G S +
Sbjct: 685 GLRKNPGCSWI 695
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 228/460 (49%), Gaps = 65/460 (14%)
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
++CA ++S+++G+++H+ I E+D + + L+ MY CG++ + R++F+ +
Sbjct: 109 QLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVF 168
Query: 225 TWNSMIDGYVK-------------NREVGF-----ARELFDFMPERDIFTWNSMISGYVD 266
WN +++GY K RE+G AR+LFD + +RD+ +WNSMISGYV
Sbjct: 169 LWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVS 228
Query: 267 VGDMEAANGLF----------DLMPFRDVVSW---------------------------- 288
G E LF DL VV+
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTL 288
Query: 289 -NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
NC++D Y+K GN+ SA F+ M R+VVSW ++A Y R +RLF M +
Sbjct: 289 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGI 348
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
P+ ++ ++L ACA G+++ G+ +H+YI++ +++ D+ +S +L+ MYAKCG M A +
Sbjct: 349 SPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHS 408
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF M K++VSWN+MI GY + +AL +F+EM+ PN T C+L AC
Sbjct: 409 VFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPACASLAA 467
Query: 468 VLEGW-WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ G + +++ + ++ V + +VD+ + G + + L +P E W +
Sbjct: 468 LERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVM 524
Query: 527 LSACSTHS-NSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
++ H SE I A + M +P +S +YA
Sbjct: 525 IAGYGMHGYGSE--AIAAFNEMRNSGIEPDEVSFISILYA 562
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 134/310 (43%), Gaps = 58/310 (18%)
Query: 332 YCEC--LRLFDRMIRGDAKPNEA--SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
+CE LR +I KP+ + SVL CA++ I G+ IHS IQ ++ D +
Sbjct: 78 FCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV 137
Query: 388 LSTSLLTMYAKCGVM--------------------------------------------- 402
L + L+ MY CG +
Sbjct: 138 LGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELG 197
Query: 403 ----DLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
+ AR +FD + +++V+SWNSMI GY +G EK L++F +M G + AT + V
Sbjct: 198 IRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
++ C++ GM+L G + ++ C++D+ ++G + + ++ + E
Sbjct: 258 VAGCSNTGMLLLGRALHGYAIKA-SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMG-ER 315
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIY--ASEGKWDEVENL 576
W ++++ + S++ + H ME E P + + + ++ A G + +++
Sbjct: 316 SVVSWTSMIAGYAREGLSDM-SVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDV 374
Query: 577 RRIMKEKELE 586
+KE +++
Sbjct: 375 HNYIKENKMQ 384
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 257/465 (55%), Gaps = 41/465 (8%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+SL+ ++ H+RI+ G + + LI Y++C +R VF+ ++ WNS+I
Sbjct: 37 KSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLI 96
Query: 231 DGYVKNREVGFARELF------DFMPE--------------------------------- 251
+GY KNR A +LF D +P+
Sbjct: 97 NGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFV 156
Query: 252 RDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
D NS++S Y G+ E + +FD M R+ SWN +I GYA GN+ R FDRM
Sbjct: 157 SDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRM 216
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLF-DRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
RNV SW ++ YV D E L LF D + +PN SL+SVL AC++ + G
Sbjct: 217 KCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSG 276
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF-DNMTEKNVVSWNSMIMGYGM 429
+ IH + + + +V L +L+ MY+KCG +D AR VF D+ K+ +SW+SMI GYG+
Sbjct: 277 RQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGL 336
Query: 430 HGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
HG+G++A+ ++ +M + G P+ T + +LSAC+ +G+V EG + + Y IEP +E
Sbjct: 337 HGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLE 396
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
+ C+VD+LGRAG + + + + +P+E GP++WGAL+S H + E+ ++ + L++L
Sbjct: 397 IFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQL 456
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
EP +P YV +SN+YAS +WD V +RR+MK+K L K G S +
Sbjct: 457 EPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWI 501
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 211/448 (47%), Gaps = 59/448 (13%)
Query: 55 DLSHPILQKLESCSTVKEF---HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVL 111
D S +LQ L T K Q H+++L GLSQ+S A++++ S L
Sbjct: 21 DPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYH-SRL 79
Query: 112 FFDGIQEPDAFMCNTIMKSFL---MLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
FD +Q + F+ N+++ + + N+ F + +M + V + +T L KV +
Sbjct: 80 VFDSLQHKNVFLWNSLINGYAKNRLYNEAFQ----LFNQMCSSDVLPDDFTLSTLSKVSS 135
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+ +L GK +H + ++ GF D V NS++ MY CG ++RKVF++ + + +WN
Sbjct: 136 ELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNV 195
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD---- 284
+I GY + + R +FD M R++F+W +MI+GYV+ GD + A LF M D
Sbjct: 196 LIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEP 255
Query: 285 ------------------------------------VVSWNCMIDGYAKIGNVTSARNCF 308
V N +ID Y+K G++ SAR F
Sbjct: 256 NRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF 315
Query: 309 --DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
D +C ++ +SW+ +++ Y E + L+D+M++ +P+ + + +L+AC+ G+
Sbjct: 316 EDDSLC-KDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGL 374
Query: 367 IDIGQWIH-SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMI 424
++ G I+ S I I+P + + ++ M + G +D A + M E W +++
Sbjct: 375 VNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALV 434
Query: 425 MGYGMHGQ---GEKALEMFMEMEKRGPT 449
+HG E A +++E P+
Sbjct: 435 SCSIIHGDLEMQELAYRFLIQLEPENPS 462
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 278/494 (56%), Gaps = 10/494 (2%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + D+ NT++ +L L ++ + E + + + T + + C +R
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL--DQFKPDLLTVSSVLRACGHLRD 322
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
L K ++ ++K GF L+ VRN LI +Y+ CG+++ AR VF D V+WNS+I G
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 233 YVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR----D 284
Y+++ ++ A +LF M + D T+ +IS + D++ GL D
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+ N +ID YAK G V + F M + V+WN +++ VR D+ L++ +M +
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ P+ A+ + L CA++ +G+ IH + + + ++ + +L+ MY+KCG ++
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
+ VF+ M+ ++VV+W MI YGM+G+GEKALE F +MEK G P+ FI ++ AC+H
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSH 622
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
+G+V EG F+ M+ YKI+P +EHY C+VDLL R+ + +EE + +P++ ++W
Sbjct: 623 SGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWA 682
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
++L AC T + E + V++ ++EL P DPG +L SN YA+ KWD+V +R+ +K+K
Sbjct: 683 SVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKH 742
Query: 585 LEKAVGSSLVHPGE 598
+ K G S + G+
Sbjct: 743 ITKNPGYSWIEVGK 756
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 251/505 (49%), Gaps = 15/505 (2%)
Query: 56 LSHPILQK-LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
+S P + + L S S + E +IH ++ GL F + +++ K S +F
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ ++ N+I+++F N F +Y K+ V + YTFP + K CAG+
Sbjct: 65 VSPAKNVYLWNSIIRAFSK-NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G V+ +I+ GFE DLFV N+L+ MYS G + AR+VF++ PV DLV+WNS+I GY
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 235 KNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVV 286
+ A E++ + D FT +S++ + ++ ++ GL VV
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N ++ Y K T AR FD M +R+ VS+N ++ Y++ + E +R+F +
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQ 302
Query: 347 AKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLAR 406
KP+ ++ SVL AC ++ + + ++I++Y+ K + + L+ +YAKCG M AR
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH-A 465
+VF++M K+ VSWNS+I GY G +A+++F M + T++ ++S T A
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
+ + + ++ I+ V + ++D+ + G + DS ++ S + W
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNT 479
Query: 526 LLSACSTHSNSELGKIVAQHLMELE 550
++SAC + G V + + E
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSE 504
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 280/511 (54%), Gaps = 42/511 (8%)
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CN ++++ + ++ YY+ + + + + +T+P + + ++ EG+K HA
Sbjct: 14 CNLLIRTLARRSSHADVMAVYYD-LRERGLVADSFTYPFVLRAIGALQISVEGRKAHAAT 72
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK----NREV 239
+K GF D + +SL+ MY++ G + ARKVF++ P +V WN M+ YV+ V
Sbjct: 73 LKTGFRWDAYTASSLMDMYTMLGRLEAARKVFDEMPQRAVVVWNMMLRCYVRCGRNTEAV 132
Query: 240 GFAREL----------------------FDFMPERDIFTW------------NSMISGYV 265
A E+ D R I + N+++ YV
Sbjct: 133 ALAEEMERGRLTPDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTGFSLPVANALLDMYV 192
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G +E A LF+ MP R+VVSW ++ GYA G V AR F + ++++ W ++
Sbjct: 193 KNGCLEEAVNLFEKMPSRNVVSWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINA 252
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
YV+ + E L LF M +P+ +++++LT CAN+G +D GQ IH + + +K D
Sbjct: 253 YVQHGCFIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLD 312
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
+L T+L+ MYAKCG ++ + VF+ M ++ +W ++I G +GQ +ALE+F +ME+
Sbjct: 313 AVLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLATNGQAGRALELFEDMER 372
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
P+ TFI VLSAC H G+V EG F M+ +Y+I P+VEHY C+V+LLGRAG +
Sbjct: 373 SEAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLD 432
Query: 506 DSEELVSKLPM--EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNI 563
++E+L+ +P+ +A P L+GAL++AC N ++ + + + + + + P +L+SN+
Sbjct: 433 EAEKLIKSIPINKDAMP-LFGALITACKAQGNVKMSERLTKRIGKQGYQIPDVNLLMSNV 491
Query: 564 YASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YA+ +W++V +R M ++K G SL+
Sbjct: 492 YATASRWEDVVRVRSKMAHPSVKKNAGCSLI 522
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 181/572 (31%), Positives = 296/572 (51%), Gaps = 18/572 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+++ V++ Q+H ++ SG QD + + ++ + ++ + L FD + E
Sbjct: 157 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLID-FYSKNGNIEEARLVFDQLSEK 215
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
A TI+ + +L + +M V + Y + C+ + L GK++
Sbjct: 216 TAVTWTTIIAGYTKCGRSAVSLELF-AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI 274
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA +++ G E+D+ V N LI Y+ C V RK+F+ V ++++W +MI GY++N
Sbjct: 275 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQN--- 331
Query: 240 GFARELFDFMPERDIFTWN----SMISGYVDVGDMEAANGLFDLMPF-------RDVVSW 288
F E E + W + S G EA + + D
Sbjct: 332 SFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVK 391
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
N +ID YAK + A+ FD M +NV+S+N ++ Y + E L LF M K
Sbjct: 392 NGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQK 451
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PNE + +++TA +N+ + GQ H+ + K + ++ +L+ MYAKCG ++ AR +
Sbjct: 452 PNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKM 511
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F++ ++VV WNSMI + HG+ E+AL MF EM K G PN TF+ VLSAC+HAG V
Sbjct: 512 FNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRV 571
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
+G +F+ M + I+P EHY C+V LLGR+G + +++E + K+P+E +W +LLS
Sbjct: 572 EDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLS 630
Query: 529 ACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKA 588
AC N ELGK A+ + +P+D G Y+LLSNI+AS+G W +V+ +R M E+ K
Sbjct: 631 ACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKE 690
Query: 589 VGSSLVHPGEFASESIVENCPPHRKCIVYSML 620
G S + + I + HR+ + S+L
Sbjct: 691 PGRSWIEVNNKVNVFIARDT-THREADIGSVL 721
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 249/488 (51%), Gaps = 15/488 (3%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+LQ S + + + IH Q++VSGL D+F A+ +L +C+ V + + FD +
Sbjct: 55 LLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLAN-ILINVCSKSDRVDNARVVFDKMPHK 113
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-NHYTFPLLGKVCAGIRSLREGKK 178
+ ++++ + AL + + + K EH N + + + C + + +G +
Sbjct: 114 NLITWSSMVSMYSQQGYSEEALMVFVD-LQRKSGEHPNEFVLASVIRACTQLGVVEKGAQ 172
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H +V+ GF+ D++V SLI YS G + +AR VF+ VTW ++I GY K
Sbjct: 173 LHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGR 232
Query: 239 VGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNC 290
+ ELF M E ++ + +S++S + +E + + R DV N
Sbjct: 233 SAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNV 292
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+ID Y K V + R FD+M ++N++SW +++ Y++ E ++LF M R KP+
Sbjct: 293 LIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPD 352
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
+ SVLT+C + ++ G+ +H+Y K ++ D + L+ MYAK ++ A+ VFD
Sbjct: 353 GFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFD 412
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M E+NV+S+N+MI GY + +ALE+F EM R PN+ TF +++A ++ +
Sbjct: 413 VMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRH 472
Query: 471 GWWYFDLMQRI-YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
G + + + ++ P V + +VD+ + G + ++ ++ + + W +++S
Sbjct: 473 GQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMIST 529
Query: 530 CSTHSNSE 537
+ H +E
Sbjct: 530 HAQHGEAE 537
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/584 (32%), Positives = 311/584 (53%), Gaps = 55/584 (9%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDA 121
L SC T+++ HQI+ ++V+G + ++ + +S S+ S F I PD
Sbjct: 21 LSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDI 80
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAG--IRSLREGKKV 179
F+ N I+K++ ++ P ++ M+ V + +TFP L K CA I + + G +V
Sbjct: 81 FLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQV 140
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H +++ GF D+FV N+L++ Y G+V++A KVF++ V D V++N+MI+G+ + +V
Sbjct: 141 HCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDV 200
Query: 240 GFARELFDFMP----ERDIFTWNSMISG-----------------YVDVG---------- 268
+F M D +T+ +++SG Y ++G
Sbjct: 201 SGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVN 260
Query: 269 ---DMEAANG--------LFDLMPFRDVVS-WNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
DM A G L + P + VV+ W ++ YA G V AR FD+M R+V
Sbjct: 261 KLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDV 320
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
VSW +++ Y + E L LF ++ KP+E ++++ L+ACA +G +++G+ IH
Sbjct: 321 VSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQ 380
Query: 377 IQ----KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE--KNVVSWNSMIMGYGMH 430
C I +++++ MYAKCG +D+A +VF ++ K +NS+I G H
Sbjct: 381 YAGENWTCSINRG--FTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHH 438
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G+GE A +F EM G P++ TF+ VLSAC H G+V G F+ M +Y + P++EH
Sbjct: 439 GRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEH 498
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGCMVDLLGRAG + ++ L+ K+P +A +W ALLSAC H + L ++ + L+EL+
Sbjct: 499 YGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQ 558
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YV+LSN+ + + DE +LR+ + ++K G S V
Sbjct: 559 HDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYV 602
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 287/573 (50%), Gaps = 75/573 (13%)
Query: 64 LESCSTVKEFH---QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L +C+ +++ + ++H L+ G D F+A+ +L S + +F++ I +PD
Sbjct: 195 LNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYE-IPKPD 253
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
N ++ ++ AL KM + V + +T K CA I ++ G+++H
Sbjct: 254 IVSWNAVIAGCVLHEKNDLALKLL-GKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLH 312
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
+ ++K E D FV LI MYS CG + DAR VF
Sbjct: 313 SALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVF------------------------- 347
Query: 241 FARELFDFMPERDIFTWNSMISGYVDVG-DMEA--------------------------- 272
D MP +D+ WNS+ISGY + G D+EA
Sbjct: 348 ------DLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA 401
Query: 273 ---ANGLFDLMPFRDVVSW--------NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
ANG + + + S N ++D Y K + A F+ ++V++
Sbjct: 402 GSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTS 461
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ Y + E L+++ RM D KP+ S+ ACAN+ + G+ IH ++ KC
Sbjct: 462 MITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCG 521
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
+ DV SL+ MYAKCG +D A +F+ ++ + +VSW++MI G HG G KAL++F
Sbjct: 522 LLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFY 581
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M K G PN T + VLSAC HAG+V E +F LM++++ I P EHY CMVD+LGR
Sbjct: 582 QMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRV 641
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
G + ++ LV ++P +A A+WGALL A H N ELG+ A+ L+ LEP G ++LL+
Sbjct: 642 GRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLA 701
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
NIYAS G WD V +RR MK ++K G S +
Sbjct: 702 NIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWI 734
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 166/335 (49%), Gaps = 12/335 (3%)
Query: 147 KMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCG 206
+M++ + N ++ + CAG+ G KVH ++K G++ D F N+L+ MY+ G
Sbjct: 178 EMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSG 237
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMIS 262
A VF + P D+V+WN++I G V + + A +L M + FT +S +
Sbjct: 238 CPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALK 297
Query: 263 GYVDVGDMEAANGL------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
+G ++ L D+ P D +ID Y+K G + AR FD M ++V
Sbjct: 298 ACAAIGLVKLGRQLHSALMKMDMEP--DSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDV 355
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSY 376
+ WN +++ Y C E + LF M + + N+ +L ++L + A + +H+
Sbjct: 356 IVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTI 415
Query: 377 IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKA 436
K + D ++ SLL Y KC +++ A VF+ +++V++ SMI Y +G GE+A
Sbjct: 416 SIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEA 475
Query: 437 LEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
L+M++ M+ R P+ F + +AC + +G
Sbjct: 476 LKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQG 510
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 198/440 (45%), Gaps = 68/440 (15%)
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
+ + G +HARI++ L +RN L+++YS C ARK+ D DLV+W+++I
Sbjct: 64 KDVSSGMAIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALI 120
Query: 231 DGYVKNREVGFA----RELFDFMPERDIFTWNSMISGYVDVGDME--------------- 271
GYV+N A E++ + + FT++S++ G ++E
Sbjct: 121 SGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMI 180
Query: 272 ----------------AANGLFD-------------LMPFRDVVSWNCMIDGYAKIGNVT 302
A GL D L D S N ++D YAK G
Sbjct: 181 STGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPE 240
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+A F + ++VSWN ++A V + L+L +M P+ +L S L ACA
Sbjct: 241 AAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACA 300
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+G++ +G+ +HS + K ++PD + L+ MY+KCG++ AR VFD M K+V+ WNS
Sbjct: 301 AIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNS 360
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
+I GY G +A+ +F M K G N T +L + AG G+ ++++
Sbjct: 361 IISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKST--AGSQANGF-----CEQVH 413
Query: 483 KIEPKVEHY------GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
I K + ++D G+ L+ D+ ++ P E A S + +S
Sbjct: 414 TISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAED----LVAYTSMITAYSQY 469
Query: 537 ELGKIVAQHLMELEPRDPGP 556
LG+ + + ++ RD P
Sbjct: 470 GLGEEALKMYLRMQDRDIKP 489
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 303/562 (53%), Gaps = 10/562 (1%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
QIH S D+ + VL L S +S + FD ++ + T++ ++
Sbjct: 242 QIHGYAYRSATETDT-SVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQN 300
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
+ A++ ++ A + +L C + ++ +G+++HA ++K E D +V
Sbjct: 301 SFNAEAITMFWNMTQAGWQPDGFACTSILNS-CGSLAAIWQGRQIHAHVIKADLEADEYV 359
Query: 195 RNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFD----FMP 250
+N+LI MY+ C + +AR VF+ D +++N+MI+GY KNR++ A +F F
Sbjct: 360 KNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSL 419
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLM----PFRDVVSWNCMIDGYAKIGNVTSARN 306
+ T+ S++ +E + + L+ D+ + + +ID Y+K V A+
Sbjct: 420 RPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKT 479
Query: 307 CFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV 366
F+ + +++V WN ++ + + + E ++LF++++ PNE + ++++T + +
Sbjct: 480 VFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLAS 539
Query: 367 IDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMG 426
+ GQ H++I K + D +S +L+ MYAKCG + R +F++ ++V+ WNSMI
Sbjct: 540 MFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITT 599
Query: 427 YGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEP 486
Y HG E+AL++F M + PN TF+ VLSAC HAG V EG +F+ M+ Y IEP
Sbjct: 600 YAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEP 659
Query: 487 KVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHL 546
+EHY +V+L GR+G + ++E + ++P++ A+W +LLSAC N+E+G+ A+
Sbjct: 660 GIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMA 719
Query: 547 MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVE 606
+ +P D GPYVLLSNIYAS+G W +V NLR+ M K G S + + IV
Sbjct: 720 LLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVR 779
Query: 607 NCPPHRKCIVYSMLGEIGAQMK 628
++YS+L E+ + +K
Sbjct: 780 GREHPEAELIYSVLDELTSLIK 801
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 192/394 (48%), Gaps = 13/394 (3%)
Query: 76 IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLN 135
IH + V+G D F + +L+ ++L + + FD + + +++ +
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGY-SNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHG 98
Query: 136 DPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVR 195
A+S + A N + + + C +++ G++VH VK + +++V
Sbjct: 99 RDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVG 158
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM------ 249
+LI++Y+ G + +A VF PV VTWN++I GY + G A ELFD M
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR 218
Query: 250 PERDIFTWNSMISGYVDVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
P+R F S +S +G +E + + D N +ID Y K +++AR
Sbjct: 219 PDR--FVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAAR 276
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
FD M RN+VSW +++ Y++ E + +F M + +P+ + S+L +C ++
Sbjct: 277 KLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLA 336
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
I G+ IH+++ K ++ D + +L+ MYAKC + AR VFD + E + +S+N+MI
Sbjct: 337 AIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIE 396
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
GY + +A+ +F M P+ TF+ +L
Sbjct: 397 GYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL 430
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 148/315 (46%), Gaps = 13/315 (4%)
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
G R R +HAR G DLF+ N L+ YS G + DAR +F+ P +LV+W
Sbjct: 29 GGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWG 88
Query: 228 SMIDGYVKNREVGFARELFDFMPERDIFTWNSMI----------SGYVDVGDMEAANGLF 277
S+I Y ++ A LF + N + S V +G E +G+
Sbjct: 89 SVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLG--EQVHGIA 146
Query: 278 DLMPF-RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECL 336
+ +V +I+ YAK+G + A F + +R V+WN ++ Y + L
Sbjct: 147 VKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVAL 206
Query: 337 RLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMY 396
LFDRM +P+ L S ++AC+ +G ++ G+ IH Y + + D + L+ +Y
Sbjct: 207 ELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLY 266
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
KC + AR +FD M +N+VSW +MI GY + +A+ MF M + G P+
Sbjct: 267 CKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACT 326
Query: 457 CVLSACTHAGMVLEG 471
+L++C + +G
Sbjct: 327 SILNSCGSLAAIWQG 341
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 250/443 (56%), Gaps = 31/443 (6%)
Query: 152 FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA 211
FV+ N T ++ + C+ +EG ++H + + GFE D+F+ N++I MY V++A
Sbjct: 252 FVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEA 311
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
RK+ FD M +D+ +WN++I+GYV ++E
Sbjct: 312 RKI-------------------------------FDMMNRKDVVSWNALIAGYVQNDEVE 340
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
LF+ +DV+SW MI G++ G + + F M ++ ++W +++ +V +
Sbjct: 341 EGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGE 400
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
Y E + F M+R +PN +L SVL+A A + ++ G IH+ + K ++ D+ + S
Sbjct: 401 YEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNS 460
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L++MY KCG + +F ++ N+VS+NSMI G+ +G GE+ALE+F +M G PN
Sbjct: 461 LVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPN 520
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
+ TF+ VLSACTH G++ +GW YF M+ +Y+IEP HY C+VDLLGRAG + D+ +L+
Sbjct: 521 EITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLI 580
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+P E +WGALL A H ++ K+ AQ + +LEP + PY +LS +Y+S G+
Sbjct: 581 RSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNR 640
Query: 572 EVENLRRIMKEKELEKAVGSSLV 594
+ E +R K ++K+ G S +
Sbjct: 641 DSEQVRMAQGLKGVKKSAGYSWI 663
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 79/386 (20%)
Query: 180 HARIVKCGFELDL------FVR---------NSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
H++I K G DL F R +++ Y G + ARK+FE P
Sbjct: 35 HSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA 94
Query: 225 TWNSMIDGYVKNRE--VGFARELFDFMPERDIFTW------------------------- 257
++N+MI Y ++ +G A +LF M ER+ ++
Sbjct: 95 SYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETPV 154
Query: 258 --------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
N++ISGY+ VG +E A +F+ M RDV+SW+ M+DGY K G + AR F+
Sbjct: 155 EWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFE 214
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVID 368
RM RNVV+W ++ +++ Y LF RM + G K N +L + AC+ G
Sbjct: 215 RMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYK 274
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G +H + + + DV L +++ MY + + AR +FD M K+VVSWN++I GY
Sbjct: 275 EGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYV 334
Query: 429 MHGQGEKALEMFMEMEKRG---------------------------PTPNDATFICVLSA 461
+ + E+ +F + +++ P +D + V+S
Sbjct: 335 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 394
Query: 462 CTHAGMVLEG-WWYFDLMQRIYKIEP 486
G E +W+ ++++++ + P
Sbjct: 395 FVGNGEYEEAIYWFIEMLRKVVRPNP 420
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 43/376 (11%)
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+S I+ + GD++ A +F MP ++ +SW M+ Y + G++ AR F++M R
Sbjct: 35 HSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA 94
Query: 318 SWNILLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG----- 370
S+N ++ Y R E +LF M + N S +++T A G++D
Sbjct: 95 SYNAMITAYTRSNPMMIGEASKLFAEM----RERNSISYAAMITGLARAGMVDNAEELYL 150
Query: 371 ----QW---------IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLAR 406
+W I Y++ R++ DV+ +S++ Y K G + AR
Sbjct: 151 ETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHAR 210
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP-NDATFICVLSACTHA 465
+F+ M E+NVV+W +MI G+ G E +F+ M K G N T + AC+
Sbjct: 211 ELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEF 270
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G EG L+ R+ E V ++ + R + ++ ++ + + W A
Sbjct: 271 GEYKEGIQMHGLVSRM-GFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRK-DVVSWNA 328
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE- 584
L++ + E G ++ + + + +D + + ++++GK + L R+M +++
Sbjct: 329 LIAGYVQNDEVEEGYVLFE---KTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDD 385
Query: 585 -LEKAVGSSLVHPGEF 599
AV S V GE+
Sbjct: 386 IAWTAVISGFVGNGEY 401
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
S+ F + + D ++ F+ N + +++ +M+ K V N T + A
Sbjct: 373 SIELFRMMPKQDDIAWTAVISGFVG-NGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASA 431
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
G+ +L +G ++H +VK G E DL ++NSL+ MY+ CG V D ++F ++V++NS
Sbjct: 432 GLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNS 491
Query: 229 MIDGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
MI G+ +N A ELF M + + T+ ++S VG +E F M
Sbjct: 492 MITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLY 551
Query: 285 VVS-----WNCMIDGYAKIGNVTSARNCFDRM-CMRNVVSWNILLA 324
+ + C++D + G + A + M C + W LL
Sbjct: 552 QIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLG 597
>gi|108862694|gb|ABA98288.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 572
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 248/431 (57%), Gaps = 32/431 (7%)
Query: 156 NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD-LFVRNSLIHMYSVCGEVLDARKV 214
N +T + K C+ +R++ EG +VHA + K G + V +L+ +Y G V DAR+V
Sbjct: 116 NAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGDARRV 175
Query: 215 FEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAAN 274
F++ PV ++V N+M+ V+ ++G ARE+FD M ERD +WN+++SGY+ +GD
Sbjct: 176 FDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPISWNTLMSGYLHLGDTATVR 235
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCE 334
LFD M R+V SWN MI ++ G++ +
Sbjct: 236 ELFDEMTVRNVNSWNTMIAACSEEGSLA-------------------------------D 264
Query: 335 CLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLT 394
+++F+RM +P+ A++ +++ACA +G + I +H +QK ++ + + SL+
Sbjct: 265 TVKVFNRMRATGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLID 324
Query: 395 MYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDAT 454
MYAKCG + A+ +F K+ VS+N MI+ + HG AL++F M G P+ T
Sbjct: 325 MYAKCGCISQAQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVT 384
Query: 455 FICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKL 514
F+ VLSAC HAG+V G YF+LM+ Y ++ +HY C+VDL GRAGL+ ++ V +
Sbjct: 385 FLGVLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTM 444
Query: 515 PMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVE 574
P++ +WGALL+AC H + ++G+I A+ L+ +EP++PG YVLL N A +WD VE
Sbjct: 445 PVKPHAGVWGALLNACRKHCHVDVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVE 504
Query: 575 NLRRIMKEKEL 585
+++ M+ K L
Sbjct: 505 DVQLSMRRKLL 515
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 41/261 (15%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY---------------------------- 144
FDG+ E D NT+M +L L D +
Sbjct: 207 FDGMAERDPISWNTLMSGYLHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTV 266
Query: 145 --YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMY 202
+ +M A E + T +L CA + SL +VH + K E++ V+NSLI MY
Sbjct: 267 KVFNRMRATGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMY 326
Query: 203 SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPER----DIFTWN 258
+ CG + A+ +F + D V++N MI + ++ A +LF+ M + D T+
Sbjct: 327 AKCGCISQAQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFL 386
Query: 259 SMISGYVDVGDMEAANGLFDLMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCM 313
++S G +E F+LM V + C++D Y + G + A +CF + M
Sbjct: 387 GVLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEA-HCFVKT-M 444
Query: 314 RNVVSWNILLALYVRCKDYCE 334
+ AL C+ +C
Sbjct: 445 PVKPHAGVWGALLNACRKHCH 465
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK-PDVLLSTSL 392
E + LF M+ +PN ++ SV+ C+ + + G +H+++ K + V + +L
Sbjct: 100 EAVALFALMLWSGPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGCSSVHVGAAL 159
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
L +Y G++ AR VFD M KNVV N+M+ G A E+F M +R P
Sbjct: 160 LDLYGNIGLVGDARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPI--- 216
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS 512
++ ++S H G FD M V + M+ G + D+ ++ +
Sbjct: 217 -SWNTLMSGYLHLGDTATVRELFDEM-----TVRNVNSWNTMIAACSEEGSLADTVKVFN 270
Query: 513 KL---PMEAGPALWGALLSACS 531
++ E A L+SAC+
Sbjct: 271 RMRATGFEPDAATMAVLMSACA 292
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 250/443 (56%), Gaps = 31/443 (6%)
Query: 152 FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDA 211
FV+ N T ++ + C+ +EG ++H + + GFE D+F+ N++I MY V++A
Sbjct: 331 FVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEA 390
Query: 212 RKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDME 271
RK+ FD M +D+ +WN++I+GYV ++E
Sbjct: 391 RKI-------------------------------FDMMNRKDVVSWNALIAGYVQNDEVE 419
Query: 272 AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKD 331
LF+ +DV+SW MI G++ G + + F M ++ ++W +++ +V +
Sbjct: 420 EGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGE 479
Query: 332 YCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
Y E + F M+R +PN +L SVL+A A + ++ G IH+ + K ++ D+ + S
Sbjct: 480 YEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNS 539
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
L++MY KCG + +F ++ N+VS+NSMI G+ +G GE+ALE+F +M G PN
Sbjct: 540 LVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPN 599
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
+ TF+ VLSACTH G++ +GW YF M+ +Y+IEP HY C+VDLLGRAG + D+ +L+
Sbjct: 600 EITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLI 659
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+P E +WGALL A H ++ K+ AQ + +LEP + PY +LS +Y+S G+
Sbjct: 660 RSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNR 719
Query: 572 EVENLRRIMKEKELEKAVGSSLV 594
+ E +R K ++K+ G S +
Sbjct: 720 DSEQVRMAQGLKGVKKSAGYSWI 742
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 79/386 (20%)
Query: 180 HARIVKCGFELDL------FVR---------NSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
H++I K G DL F R +++ Y G + ARK+FE P
Sbjct: 114 HSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA 173
Query: 225 TWNSMIDGYVKNRE--VGFARELFDFMPERDIFTW------------------------- 257
++N+MI Y ++ +G A +LF M ER+ ++
Sbjct: 174 SYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETPV 233
Query: 258 --------NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
N++ISGY+ VG +E A +F+ M RDV+SW+ M+DGY K G + AR F+
Sbjct: 234 EWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFE 293
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVID 368
RM RNVV+W ++ +++ Y LF RM + G K N +L + AC+ G
Sbjct: 294 RMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYK 353
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G +H + + + DV L +++ MY + + AR +FD M K+VVSWN++I GY
Sbjct: 354 EGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYV 413
Query: 429 MHGQGEKALEMF---------------------------MEMEKRGPTPNDATFICVLSA 461
+ + E+ +F +E+ + P +D + V+S
Sbjct: 414 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 473
Query: 462 CTHAGMVLEG-WWYFDLMQRIYKIEP 486
G E +W+ ++++++ + P
Sbjct: 474 FVGNGEYEEAIYWFIEMLRKVVRPNP 499
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 43/376 (11%)
Query: 258 NSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+S I+ + GD++ A +F MP ++ +SW M+ Y + G++ AR F++M R
Sbjct: 114 HSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA 173
Query: 318 SWNILLALYVRCKDYC--ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG----- 370
S+N ++ Y R E +LF M + N S +++T A G++D
Sbjct: 174 SYNAMITAYTRSNPMMIGEASKLFAEM----RERNSISYAAMITGLARAGMVDNAEELYL 229
Query: 371 ----QW---------IHSYIQKCRIKP-----------DVLLSTSLLTMYAKCGVMDLAR 406
+W I Y++ R++ DV+ +S++ Y K G + AR
Sbjct: 230 ETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHAR 289
Query: 407 NVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP-NDATFICVLSACTHA 465
+F+ M E+NVV+W +MI G+ G E +F+ M K G N T + AC+
Sbjct: 290 ELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEF 349
Query: 466 GMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGA 525
G EG L+ R+ E V ++ + R + ++ ++ + + W A
Sbjct: 350 GEYKEGIQMHGLVSRM-GFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRK-DVVSWNA 407
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE- 584
L++ + E G ++ + + + +D + + ++++GK + L R+M +++
Sbjct: 408 LIAGYVQNDEVEEGYVLFE---KTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDD 464
Query: 585 -LEKAVGSSLVHPGEF 599
AV S V GE+
Sbjct: 465 IAWTAVISGFVGNGEY 480
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
S+ F + + D ++ F+ N + +++ +M+ K V N T + A
Sbjct: 452 SIELFRMMPKQDDIAWTAVISGFVG-NGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASA 510
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
G+ +L +G ++H +VK G E DL ++NSL+ MY+ CG V D ++F ++V++NS
Sbjct: 511 GLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNS 570
Query: 229 MIDGYVKNREVGFARELFDFM----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRD 284
MI G+ +N A ELF M + + T+ ++S VG +E F M
Sbjct: 571 MITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLY 630
Query: 285 VVS-----WNCMIDGYAKIGNVTSARNCFDRM-CMRNVVSWNILLA 324
+ + C++D + G + A + M C + W LL
Sbjct: 631 QIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLG 676
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 286/545 (52%), Gaps = 76/545 (13%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL----SSVSLSVLFFD 114
P+L+K C +V+ QIH LL + LSQ +A + +L+ TS S S + F
Sbjct: 12 PLLRK---CKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFK 68
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI-RSL 173
+Q+ + FM N++++ + + P A+ Y + M F+ N YTFP L K CA + R L
Sbjct: 69 NLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLA-NKYTFPPLIKACALVYREL 127
Query: 174 -REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
R G VHA ++ G+E D FV ++L+ YS+ +DL
Sbjct: 128 KRIGYLVHAHVIVLGYENDAFVVSALVEFYSL----------------FDLKV------- 164
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
AR LFD +D+ W M+ GY VGD+E+A LFD MP R+V+SW+ M+
Sbjct: 165 ---------ARVLFDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMM 215
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
Y+ R D+ E L LF +M + + PN++
Sbjct: 216 AAYS-------------------------------RVSDFREVLCLFRQMQKKNIVPNDS 244
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ SVLTACA++G I G W+HSY ++ + + +L+T+L+ MY+KCG ++ A VF+ +
Sbjct: 245 VIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGI 304
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+ K+ +WN+MI G+ M G K+LE+F +M G +ATF+ +L+ACTHA MV G
Sbjct: 305 SNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGL 364
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLP---MEAGPALWGALLSA 529
+FD M +Y+++P+ EHY C+VDL+ RAG++ D+E+ V + +WGA+LSA
Sbjct: 365 EFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSA 424
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C + N E+G + L L D G VL NI++ G+ + +R+ E +K
Sbjct: 425 CRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIP 484
Query: 590 GSSLV 594
G S++
Sbjct: 485 GCSVI 489
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 293/559 (52%), Gaps = 14/559 (2%)
Query: 51 LPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSV 110
LP V+ + +L L T+ Q+H ++++ G + S + S + + +
Sbjct: 2 LP-VNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQS-NRLDFAT 59
Query: 111 LFFDGIQ--EPDAFMCNTIMKSFLMLNDP-FGALSFYYEKMMAKFVEHNHYTFPLLGKVC 167
F+ I + + NTI+ + + + Y +M + + K C
Sbjct: 60 SSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKAC 119
Query: 168 AGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWN 227
G+ L G +H +K G + D +V SL+ MY+ G + A+KVF++ PV + V W
Sbjct: 120 VGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWG 179
Query: 228 SMIDGYVKNREVGFARELFDFMPER----DIFTWNSMIS--GYVDVGDM-EAANGLFDLM 280
++ GY+K + LF M + D T ++ G V G + + +G+
Sbjct: 180 VLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR 239
Query: 281 PFRDVVSW--NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRL 338
F D + +ID Y K + +AR F+ RNVV W L++ + +C+ E L
Sbjct: 240 SFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDL 299
Query: 339 FDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAK 398
F +M+R PN+ +L ++L +C+++G + G+ +H Y+ + I+ D + TS + MYA+
Sbjct: 300 FRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYAR 359
Query: 399 CGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
CG + +AR VFD M E+NV+SW+SMI +G++G E+AL+ F +M+ + PN TF+ +
Sbjct: 360 CGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSL 419
Query: 459 LSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA 518
LSAC+H+G V EGW F+ M R Y + P+ EHY CMVDLLGRAG + +++ + +P++
Sbjct: 420 LSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKP 479
Query: 519 GPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRR 578
+ WGALLSAC H +L +A+ L+ +EP YVLLSNIYA G W+ V +RR
Sbjct: 480 MASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRR 539
Query: 579 IMKEKELEKAVGSSLVHPG 597
M K K VG S G
Sbjct: 540 KMGIKGYRKHVGQSATEVG 558
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 191/653 (29%), Positives = 314/653 (48%), Gaps = 120/653 (18%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
+L + ++ + +H ++ G +S + V LC ++ + FD +
Sbjct: 19 QSLLNHYAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALC---GHIAYARKLFDEM 75
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE--HNHYTFPLLGKVCAGIRSLR 174
+ N +++ ++ A++ + +M+++ ++ + YT+P + K ++S+
Sbjct: 76 PQSSLLSYNIVIRMYVRDGLYHDAINVFI-RMVSEGIKCVPDGYTYPFVAKAAGELKSIS 134
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G +H RI++ F +D +V+N+L+ MY G V AR VF+ D+++WN+MI GY
Sbjct: 135 LGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYY 194
Query: 235 KNREVGFARELFDFM------PER---------------------------------DIF 255
+N + A +FD+M P+ I
Sbjct: 195 RNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIE 254
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA----------- 304
N++++ Y+ G M+ A +F M RDV++W CMI+GY + G+V +A
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEG 314
Query: 305 -----------------------RNCFDRMCMRNVVSWNI-----LLALYVRCK--DYC- 333
C +R V +I L+++Y +CK D C
Sbjct: 315 VRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCF 374
Query: 334 ----------------------------ECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
+ L LF RM R D +PN A+L S+L A A +
Sbjct: 375 RVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLA 434
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK----NVVSWN 421
+ IH Y+ K + +T L+ +Y+KCG ++ A +F+ + EK +VV W
Sbjct: 435 DLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRI 481
++I GYGMHG G AL++FMEM + G TPN+ TF L+AC+H+G+V EG F M
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEH 554
Query: 482 YKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI 541
YK + HY C+VDLLGRAG + ++ L++ +P E +WGALL+AC TH N +LG++
Sbjct: 555 YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEM 614
Query: 542 VAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A L ELEP + G YVLL+NIYA+ G+W ++E +R +M+ L K G S +
Sbjct: 615 AANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTI 667
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 264/500 (52%), Gaps = 45/500 (9%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + P +CN ++ ++ L A + + V N + G AG
Sbjct: 180 LFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWN---VMITGYARAGSM 236
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+ + R+ E D+ R +++ Y G V A KVF+D P D V WN+M+D
Sbjct: 237 GIAQ------RLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMD 290
Query: 232 GYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCM 291
G+V+N + A +LF MP+RD +WN+++ GYV GDM++AN F P +D +SWN +
Sbjct: 291 GFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTL 350
Query: 292 IDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNE 351
I GY G L L MIRG KP++
Sbjct: 351 ISGYKDEG-----------------------------------ALSLLSEMIRGGLKPDQ 375
Query: 352 ASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN 411
A+L V++ CA++ + G+ +H + K + D L+ +SL++MY+KCG++ A VF+
Sbjct: 376 ATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFEL 435
Query: 412 MTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ +++ V+WN+MI Y HG ++AL++F M K G P+ ATF+ +LSAC H G + EG
Sbjct: 436 ILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEG 495
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
++F MQ + + P+ +HY CMVDLLGR+G + + + ++P + W L S C+
Sbjct: 496 CYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVCN 555
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
+H +LG+I+A+++++ P D G Y LLSNIYA++ W ++R MKE+ L+K G
Sbjct: 556 SHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGC 615
Query: 592 SLVH-PGEFASESIVENCPP 610
S + GE + S ++ P
Sbjct: 616 SWIELKGEVVTFSSNDSNHP 635
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 144/256 (56%), Gaps = 8/256 (3%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+F N+ I+ + G V AR+VF++ ++ TWN M+ G ++NR + AR++FD MP
Sbjct: 33 DVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMP 92
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
R+ +W ++++GY G + A LF+ +P R+VVSWN M+ GYA+ G V AR FD
Sbjct: 93 VRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDM 152
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW +++ Y++ K E LFD M P + ++L+ +G +
Sbjct: 153 MPWRDDVSWLTMISGYIKRKHVREARELFDSM----PSPPTSVCNALLSGYVELGYMRAA 208
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ + +Q + + ++T YA+ G M +A+ +FD M EK+V+S +++ GY +
Sbjct: 209 EVLFGQMQ----TRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQN 264
Query: 431 GQGEKALEMFMEMEKR 446
G + A ++F +M R
Sbjct: 265 GSVDAAWKVFKDMPHR 280
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 140/341 (41%), Gaps = 84/341 (24%)
Query: 222 DLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMP 281
D+ N+ I+ + + V AR +FD M ER++FTWN M+SG + + A +FD MP
Sbjct: 33 DVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMP 92
Query: 282 FRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR 341
R+ VSW ++ GYA+ G V AR F+R+ RNVVSWN +++ Y R LFD
Sbjct: 93 VRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDM 152
Query: 342 MIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGV 401
M D + S +++++ YI++ ++
Sbjct: 153 MPWRD----DVSWLTMISG---------------YIKRKHVRE----------------- 176
Query: 402 MDLARNVFDN-------------------------------MTEKNVVSWNSMIMGYGMH 430
AR +FD+ M +N VSWN MI GY
Sbjct: 177 ---ARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARA 233
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE- 489
G A +F EM P + + ++ G V W +++K P +
Sbjct: 234 GSMGIAQRLFDEM----PEKDVLSRTAIMRGYLQNGSVDAAW-------KVFKDMPHRDT 282
Query: 490 -HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ M+D R + D+ +L S++P + W A+L
Sbjct: 283 VAWNTMMDGFVRNDRLDDALKLFSEMP-DRDQISWNAILQG 322
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/517 (34%), Positives = 275/517 (53%), Gaps = 48/517 (9%)
Query: 151 KFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHM--YSVCGEV 208
KF+ +H +L K C ++ L +K+HA ++K G + ++ S G++
Sbjct: 19 KFIS-DHPHLSILEKHCTTMKDL---QKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDI 74
Query: 209 LDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF-------DFMPER--------- 252
A VF +L +WN++I G+ ++ A LF P R
Sbjct: 75 NYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKA 134
Query: 253 ------------------------DIFTWNSMISGYVDVGDM-EAANGLFDLMPFRDVVS 287
D F N++I Y + G + E ++ M F D+V+
Sbjct: 135 YAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDF-DIVA 193
Query: 288 WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA 347
WN MI G AK G V +R FD M +RN VSWN +++ YVR E L LF +M
Sbjct: 194 WNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERI 253
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP+E +++S+L A A +G + G+WIH YI+K + +V+++ S++ MY KCG + A
Sbjct: 254 KPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQ 313
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VF+ K + SWN+MI+G M+G +A+++F +E P+D TF+ VL+AC ++G+
Sbjct: 314 VFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGL 373
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V + YF LM + YKIEP ++HY CMVD LGRAGL+ ++EEL+ +P+ +W +LL
Sbjct: 374 VDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLL 433
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SAC H N EL K A+H+++L+ D YVLLSNIYA+ +++E R MKEK++EK
Sbjct: 434 SACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEK 493
Query: 588 AVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIG 624
G SL+ E + + VYS+L E+G
Sbjct: 494 EPGCSLIEVNGEIHEFVAGGRLHPQAQEVYSLLNELG 530
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 212/424 (50%), Gaps = 47/424 (11%)
Query: 58 HPILQKLES-CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDG 115
HP L LE C+T+K+ +IH LL +GL++ A S VL TS ++ + L F
Sbjct: 24 HPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQ 83
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
I P+ F NTI++ F + P A+S + + ++ V+ + T+P + K A +
Sbjct: 84 IHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHY 143
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G ++H R++K G + D F+RN++I+MY+ CG + + K F + +D+V WNSMI G K
Sbjct: 144 GAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAK 203
Query: 236 NREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR------------ 283
EV +R+LFD MP R+ +WNSMISGYV G + A LF M
Sbjct: 204 CGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSL 263
Query: 284 ---------------------------DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
+V+ +ID Y K G++ A F+ ++ +
Sbjct: 264 LNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGL 323
Query: 317 VSWN-ILLALYVR-CKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
SWN ++L L + C++ E ++LF R+ + +P++ + + VLTAC G++D +
Sbjct: 324 SSWNTMILGLAMNGCEN--EAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYF 381
Query: 375 SYIQKC-RIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM-TEKNVVSWNSMIMGYGMHGQ 432
S + K +I+P + + ++ + G+++ A + NM + + W+S++ HG
Sbjct: 382 SLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGN 441
Query: 433 GEKA 436
E A
Sbjct: 442 VELA 445
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,961,195,981
Number of Sequences: 23463169
Number of extensions: 411124067
Number of successful extensions: 1042002
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7705
Number of HSP's successfully gapped in prelim test: 3586
Number of HSP's that attempted gapping in prelim test: 853608
Number of HSP's gapped (non-prelim): 52509
length of query: 641
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 492
effective length of database: 8,863,183,186
effective search space: 4360686127512
effective search space used: 4360686127512
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)