BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040576
(641 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/567 (38%), Positives = 346/567 (61%), Gaps = 6/567 (1%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
LQ L C+ + + Q+H Q++ L +D A +++ L + +L+V F+ +QEP+
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISAL-SLCRQTNLAVRVFNQVQEPN 81
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
+CN+++++ + P+ A F + +M + +++T+P L K C+G L K +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAF-FVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGE--VLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
I K G D++V N+LI YS CG V DA K+FE D V+WNSM+ G VK E
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
+ AR LFD MP+RD+ +WN+M+ GY +M A LF+ MP R+ VSW+ M+ GY+K
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 299 GNVTSARNCFDRMCM--RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
G++ AR FD+M + +NVV+W I++A Y E RL D+M+ K + A+++S
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
+L AC G++ +G IHS +++ + + + +LL MYAKCG + A +VF+++ +K+
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 417 VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFD 476
+VSWN+M+ G G+HG G++A+E+F M + G P+ TFI VL +C HAG++ EG YF
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 477 LMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNS 536
M+++Y + P+VEHYGC+VDLLGR G ++++ ++V +PME +WGALL AC H+
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 537 ELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHP 596
++ K V +L++L+P DPG Y LLSNIYA+ W+ V ++R MK +EK G+S V
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 597 GEFASESIVENCPPHRKCIVYSMLGEI 623
+ E V + + +Y MLG +
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 356/611 (58%), Gaps = 46/611 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFD 114
+HP L L +C T++ IH Q++ GL ++A S++++ L + ++ F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
IQEP+ + NT+ + + +DP AL Y M++ + N YTFP + K CA ++ +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYV-CMISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EG+++H ++K G +LDL+V SLI MY G + DA KVF+ P D+V++ ++I GY
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLF-DLMPF----------- 282
+ A++LFD +P +D+ +WN+MISGY + G+ + A LF D+M
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 283 --------------RDVVSW-------------NCMIDGYAKIGNVTSARNCFDRMCMRN 315
R V W N +ID Y+K G + +A F+R+ ++
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V+SWN L+ Y Y E L LF M+R PN+ +++S+L ACA++G IDIG+WIH
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 376 YIQKCRIKPDV---LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQ 432
YI K R+K L TSL+ MYAKCG ++ A VF+++ K++ SWN+MI G+ MHG+
Sbjct: 392 YIDK-RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 433 GEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYG 492
+ + ++F M K G P+D TF+ +LSAC+H+GM+ G F M + YK+ PK+EHYG
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
CM+DLLG +GL +++EE+++ + ME +W +LL AC H N ELG+ A++L+++EP
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 553 DPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHR 612
+PG YVLLSNIYAS G+W+EV R ++ +K ++K G S + E I+ + R
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 630
Query: 613 KCIVYSMLGEI 623
+Y ML E+
Sbjct: 631 NREIYGMLEEM 641
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 332/615 (53%), Gaps = 42/615 (6%)
Query: 56 LSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFD 114
L +P+L LE C + QI Q++++GL D FA+SR++ S S + SV
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH--NHYTFPLLGKVCAGIRS 172
GI+ P+ F N ++ F +P + Y + + E +H+T+P+L KVCA +R
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
G + ++K EL V N+ IHM++ CG++ +ARKVF++ PV DLV+WN +I+G
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 233 YVKNRE-----------------------VGF------------ARELFDFMPERDIFTW 257
Y K E +G +E ++++ E +
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 258 NSMISGYVDV----GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCM 313
+++ +D+ GD+ A +FD + R +VSW MI GYA+ G + +R FD M
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 314 RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI 373
++VV WN ++ V+ K + L LF M + KP+E +++ L+AC+ +G +D+G WI
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H YI+K + +V L TSL+ MYAKCG + A +VF + +N +++ ++I G +HG
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
A+ F EM G P++ TFI +LSAC H GM+ G YF M+ + + P+++HY
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVDLLGRAGL+ +++ L+ +PMEA A+WGALL C H N ELG+ A+ L+EL+P D
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 591
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRK 613
G YVLL +Y W++ + RR+M E+ +EK G S + E IV +
Sbjct: 592 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 651
Query: 614 CIVYSMLGEIGAQMK 628
+Y L +G M+
Sbjct: 652 EKIYDRLHCLGRHMR 666
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/579 (36%), Positives = 333/579 (57%), Gaps = 46/579 (7%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS----LSSVSLSVLF---- 112
+ L SC T + +QIH +L+ +G+ ++S +R++ +S L+ + V
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 113 --FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
F + D F+ N ++KS DP AL M+ V + ++ L+ K C+ +
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALL-LLCLMLENGVSVDKFSLSLVLKACSRL 134
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
++ G ++H + K G DLF++N LI +Y CG + +R++F+ P D V++NSMI
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 231 DGYVKNREVGFARELFDFMP----------------------------------ERDIFT 256
DGYVK + ARELFD MP E+D+ +
Sbjct: 195 DGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS 254
Query: 257 WNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV 316
WNSMI GYV G +E A GLFD+MP RDVV+W MIDGYAK+G V A+ FD+M R+V
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 317 VSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
V++N ++A YV+ K + E L +F M + P++ +L+ VL A A +G + +H
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 374
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
YI + + L +L+ MY+KCG + A VF+ + K++ WN+MI G +HG GE
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
A +M +++E+ P+D TF+ VL+AC+H+G+V EG F+LM+R +KIEP+++HYGCMV
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 494
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L R+G + ++ L+ ++P+E +W L+ACS H E G++VA+HL+ +P
Sbjct: 495 DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS 554
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
YVLLSN+YAS G W +V +R +MKE+++EK G S +
Sbjct: 555 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 317/547 (57%), Gaps = 5/547 (0%)
Query: 53 IVDLSHPILQKLES----CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSL 108
I LSHP L LE+ C + +QIH +++ GL QD S + +S SS+S
Sbjct: 2 IQRLSHPSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSY 61
Query: 109 SVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCA 168
S F+ + P ++ N ++K + F +S M + YTFPL+ KVC+
Sbjct: 62 SSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS 121
Query: 169 GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNS 228
+R G VH +++ GF+ D+ V S + Y C ++ ARKVF + P + V+W +
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 229 MIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSW 288
++ YVK+ E+ A+ +FD MPER++ +WN+++ G V GD+ A LFD MP RD++S+
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 289 NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
MIDGYAK G++ SAR+ F+ +V +W+ L+ Y + E ++F M + K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYI-QKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
P+E ++ +++AC+ MG ++ + + SY+ Q+ + +L+ M AKCG MD A
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
+F+ M ++++VS+ SM+ G +HG G +A+ +F +M G P++ F +L C + +
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
V EG YF+LM++ Y I +HY C+V+LL R G ++++ EL+ +P EA + WG+LL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
CS H N+E+ ++VA+HL ELEP+ G YVLLSNIYA+ +W +V +LR M E + K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 588 AVGSSLV 594
G S +
Sbjct: 542 ICGRSWI 548
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 331/585 (56%), Gaps = 54/585 (9%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTS---LSSVSLSVLFFDGI 116
+ ++ +C T+++ QIH + SG +D+ AA+ +L+ TS + + F+ +
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 117 QEPDAFMCNTIMKSFLMLND--PFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ + F NTI++ F ++ A++ +YE M +FVE N +TFP + K CA ++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
EGK++H +K GF D FV ++L+ MY +CG + DA
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDA----------------------- 182
Query: 235 KNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDG 294
R +F N + V + D +G ++V WN MIDG
Sbjct: 183 -----------------RVLFYKNIIEKDMVVMTDRRKRDG--------EIVLWNVMIDG 217
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASL 354
Y ++G+ +AR FD+M R+VVSWN +++ Y + + + +F M +GD +PN +L
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 355 MSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE 414
+SVL A + +G +++G+W+H Y + I+ D +L ++L+ MY+KCG+++ A +VF+ +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 415 KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWY 474
+NV++W++MI G+ +HGQ A++ F +M + G P+D +I +L+AC+H G+V EG Y
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 475 FDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHS 534
F M + +EP++EHYGCMVDLLGR+GL+ ++EE + +P++ +W ALL AC
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 535 NSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
N E+GK VA LM++ P D G YV LSN+YAS+G W EV +R MKEK++ K G SL+
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 595 HPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC-RRDVASQI 638
E +VE+ + + SML EI ++++ R + +Q+
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQV 562
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/439 (41%), Positives = 275/439 (62%), Gaps = 2/439 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D+ N++I Y+ G++ +AR++F++ PV D+ TW +M+ GY++NR V ARELFD MP
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
ER+ +WN+M++GYV ME A LFD+MP R+V +WN MI GYA+ G ++ A+N FD+
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M R+ VSW ++A Y + E LRLF +M R + N +S S L+ CA++ +++G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H + K + + +LL MY KCG ++ A ++F M K++VSWN+MI GY H
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GE AL F M++ G P+DAT + VLSAC+H G+V +G YF M + Y + P +H
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH 548
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y CMVDLLGRAGL+ D+ L+ +P E A+WG LL A H N+EL + A + +E
Sbjct: 549 YACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 608
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCP 609
P + G YVLLSN+YAS G+W +V LR M++K ++K G S + + + S+ +
Sbjct: 609 PENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFH 668
Query: 610 PHRKCIVYSMLGEIGAQMK 628
P + I ++ L E+ +MK
Sbjct: 669 PEKDEI-FAFLEELDLRMK 686
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 199/396 (50%), Gaps = 44/396 (11%)
Query: 183 IVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFA 242
++KCG + D+ N I Y G +A +VF+ P W V++N MI GY++N E A
Sbjct: 56 LLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELA 114
Query: 243 RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVT 302
R+LFD MPERD+ +WN MI GYV ++ A LF++MP RDV SWN M+ GYA+ G V
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDR-----------MIRGDAKPNE 351
AR+ FDRM +N VSWN LL+ YV+ E LF ++ G K +
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 352 ASLMSVLTACANMGVIDIGQW---IHSYIQKCRIK-----------PDVLLSTSLLTMYA 397
++ +M V D+ W I Y Q +I DV T++++ Y
Sbjct: 235 --IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFIC 457
+ +++ AR +FD M E+N VSWN+M+ GY QGE+ +EM E+ P N +T+
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGY---VQGER-MEMAKELFDVMPCRNVSTWNT 348
Query: 458 VLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE--HYGCMVDLLGRAGLMRDSEELVSKLP 515
+++ G + E FD M PK + + M+ ++G ++ L ++
Sbjct: 349 MITGYAQCGKISEAKNLFDKM-------PKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 516 MEAG---PALWGALLSACSTHSNSELGKIVAQHLME 548
E G + + + LS C+ ELGK + L++
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
+S + FD + + D ++ + F AL + + M + N +F
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ-MEREGGRLNRSSFSSALS 417
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA + +L GK++H R+VK G+E FV N+L+ MY CG + +A +F++ D+V+
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 226 WNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMIS-----GYVDVGDMEAANGL 276
WN+MI GY ++ A F+ M D T +++S G VD G
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 277 FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
D + + CM+D + G + A N M + W LL
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 308/534 (57%), Gaps = 35/534 (6%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS--SVSLSVLFFDGI 116
PIL E ++ E Q H +L +GL D+F+AS+++ T+ +VS + + I
Sbjct: 41 PILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI 100
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P+ F N++++++ + P AL+ + E ++ V + Y+F + K CA EG
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEG 159
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
+++H +K G D+FV N+L+++Y G FE
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSG-------YFE-------------------- 192
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
AR++ D MP RD +WNS++S Y++ G ++ A LFD M R+V SWN MI GYA
Sbjct: 193 ----IARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYA 248
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLM 355
G V A+ FD M +R+VVSWN ++ Y Y E L +F++M+ KP+ +L+
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
SVL+ACA++G + G+W+H YI K I+ + L+T+L+ MY+KCG +D A VF +++
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR 368
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+V +WNS+I +HG G+ ALE+F EM G PN TFI VLSAC H GM+ + F
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
++M +Y++EP +EHYGCMVDLLGR G + ++EELV+++P + L +LL AC
Sbjct: 429 EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQ 488
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
E + +A L+EL RD Y +SN+YAS+G+W++V + RR M+ + + +++
Sbjct: 489 LEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/645 (32%), Positives = 346/645 (53%), Gaps = 55/645 (8%)
Query: 26 NLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGL 85
+LP+ P N P T+N+R + L +E C ++++ Q H ++ +G
Sbjct: 11 SLPRHP-----NFSNPNQPTTNNERSRHISL-------IERCVSLRQLKQTHGHMIRTGT 58
Query: 86 SQDSFAASRVLK-KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY 144
D ++AS++ +S +S+ + FD I +P++F NT+++++ DP ++ +
Sbjct: 59 FSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAF 118
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ + N YTFP L K A + SL G+ +H VK D+FV NSLIH Y
Sbjct: 119 LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS 178
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFT-------- 256
CG++ A KVF D+V+WNSMI+G+V+ A ELF M D+
Sbjct: 179 CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 257 -------------------------------WNSMISGYVDVGDMEAANGLFDLMPFRDV 285
N+M+ Y G +E A LFD M +D
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IR 344
V+W M+DGYA + +AR + M +++V+WN L++ Y + E L +F + ++
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
+ K N+ +L+S L+ACA +G +++G+WIHSYI+K I+ + ++++L+ MY+KCG ++
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
+R VF+++ +++V W++MI G MHG G +A++MF +M++ PN TF V AC+H
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
G+V E F M+ Y I P+ +HY C+VD+LGR+G + + + + +P+ ++WG
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWG 538
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
ALL AC H+N L ++ L+ELEPR+ G +VLLSNIYA GKW+ V LR+ M+
Sbjct: 539 ALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTG 598
Query: 585 LEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQMK 628
L+K G S + E + +N P + VY L E+ ++K
Sbjct: 599 LKKEPGCSSIEIDGMIHEFLSGDNAHPMSE-KVYGKLHEVMEKLK 642
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 322/545 (59%), Gaps = 21/545 (3%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
++S + + QIH +LLV GL F ++++ +S ++ + FD + P F
Sbjct: 28 IDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHA-SSSFGDITFARQVFDDLPRPQIFP 86
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N I++ + N AL Y +A+ V + +TFP L K C+G+ L+ G+ VHA++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD--LVTWNSMIDGYVKNREVGF 241
+ GF+ D+FV+N LI +Y+ C + AR VFE P+ + +V+W +++ Y +N E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 242 ARELFDFMPERDIF-TWNSMIS---GYVDVGDMEAANGL--------FDLMPFRDVVSWN 289
A E+F M + D+ W +++S + + D++ + ++ P ++S N
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP-DLLISLN 264
Query: 290 CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP 349
M YAK G V +A+ FD+M N++ WN +++ Y + E + +F MI D +P
Sbjct: 265 TM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ S+ S ++ACA +G ++ + ++ Y+ + + DV +S++L+ M+AKCG ++ AR VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
D +++VV W++MI+GYG+HG+ +A+ ++ ME+ G PND TF+ +L AC H+GMV
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 470 EGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
EGWW+F+ M +KI P+ +HY C++DLLGRAG + + E++ +P++ G +WGALLSA
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 530 CSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAV 589
C H + ELG+ AQ L ++P + G YV LSN+YA+ WD V +R MKEK L K V
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 590 GSSLV 594
G S V
Sbjct: 561 GCSWV 565
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 362 bits (928), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 193/543 (35%), Positives = 298/543 (54%), Gaps = 33/543 (6%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLS-SVSLSVLFFDGI 116
H L L SC ++ QIH + G+ DS+ +++ S+S ++ +
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
EPDAFM NT+++ + ++P +++ + E M FV + ++F + K RSLR G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
++H + +K G E LFV +LI MY CG V
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCV---------------------------- 157
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYA 296
FAR++FD M + ++ WN++I+ D+ A +FD M R+ SWN M+ GY
Sbjct: 158 ---EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 297 KIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMS 356
K G + SA+ F M R+ VSW+ ++ + E F + R PNE SL
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 357 VLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKN 416
VL+AC+ G + G+ +H +++K V ++ +L+ MY++CG + +AR VF+ M EK
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 417 -VVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VSW SMI G MHGQGE+A+ +F EM G TP+ +FI +L AC+HAG++ EG YF
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
M+R+Y IEP++EHYGCMVDL GR+G ++ + + + ++P+ +W LL ACS+H N
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
EL + V Q L EL+P + G VLLSN YA+ GKW +V ++R+ M + ++K SLV
Sbjct: 455 IELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
Query: 596 PGE 598
G+
Sbjct: 515 VGK 517
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 361 bits (927), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 322/537 (59%), Gaps = 9/537 (1%)
Query: 97 KKLCTSLSSVSLSV---LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFV 153
K L S S+V + LF Q D+F+ N+++K++L + + Y +
Sbjct: 15 KFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCF 74
Query: 154 EHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+++TF L K C+ + +G ++H++I + GF D++V ++ MY+ G++ AR
Sbjct: 75 APDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE-RDIFTWNSMISGYVDVGDMEA 272
F++ P V+W ++I GY++ E+ A +LFD MP +D+ +N+M+ G+V GDM +
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTS 194
Query: 273 ANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDY 332
A LFD M + V++W MI GY I ++ +AR FD M RN+VSWN ++ Y + K
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQP 254
Query: 333 CECLRLFDRMIRGDA-KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTS 391
E +RLF M + P++ +++SVL A ++ G + +G+W H ++Q+ ++ V + T+
Sbjct: 255 QEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 392 LLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPN 451
+L MY+KCG ++ A+ +FD M EK V SWN+MI GY ++G AL++F+ M P+
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPD 373
Query: 452 DATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV 511
+ T + V++AC H G+V EG +F +M+ + + K+EHYGCMVDLLGRAG ++++E+L+
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 512 SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWD 571
+ +P E + + LSAC + + E + + + +ELEP++ G YVLL N+YA++ +WD
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 572 EVENLRRIMKEKELEKAVGSSLVHPGEFASESIV-ENCPPHRKCIVYSMLGEIGAQM 627
+ ++ +M++ + +K VG SL+ SE I + PHR+ I + +LG++ M
Sbjct: 493 DFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI-HLVLGDLLMHM 548
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 358 bits (918), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 337/605 (55%), Gaps = 44/605 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS-VSLSVLFFDGIQEPDAF 122
L C T +F Q+H+Q + G++ + ++ C+ L VS + F I EPD
Sbjct: 41 LGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVV 100
Query: 123 MCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFP-LLGKVCAGIRSLREGKKVHA 181
+ N ++K + + D G Y M+ + V + +TFP LL + +L GKK+H
Sbjct: 101 VWNNMIKGWSKV-DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+VK G +L+V+N+L+ MYS+CG + AR VF+ D+ +WN MI GY + +E
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 219
Query: 242 ARELFDFMPERDIFT----------------------------------------WNSMI 261
+ EL M ER++ + N+++
Sbjct: 220 SIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV 278
Query: 262 SGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ Y G+M+ A +F M RDV+SW ++ GY + GN+ AR FD+M +R+ +SW I
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ Y+R + E L +F M P+E +++SVLTACA++G ++IG+WI +YI K +
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK 398
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
IK DV++ +L+ MY KCG + A+ VF +M +++ +W +M++G +GQG++A+++F
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFF 458
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M+ P+D T++ VLSAC H+GMV + +F M+ ++IEP + HYGCMVD+LGRA
Sbjct: 459 QMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLS 561
GL++++ E++ K+PM +WGALL A H++ + ++ A+ ++ELEP + Y LL
Sbjct: 519 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
Query: 562 NIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLG 621
NIYA +W ++ +RR + + ++K G SL+ FA E + + + +Y L
Sbjct: 579 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLE 638
Query: 622 EIGAQ 626
E+ +
Sbjct: 639 ELAQE 643
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 227/509 (44%), Gaps = 51/509 (10%)
Query: 134 LNDPFGA-LSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDL 192
L PF + LS + +M+ E + + ++ + K++H++ + G +
Sbjct: 7 LKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNP 66
Query: 193 FVRNSLIHMY--SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+ L + + G V A K+F P D+V WN+MI G+ K G L+ M
Sbjct: 67 TFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNML 126
Query: 251 ER----DIFTWNSMISGYV-DVGDMEAANGLF-DLMPF---RDVVSWNCMIDGYAKIGNV 301
+ D T+ +++G D G + L ++ F ++ N ++ Y+ G +
Sbjct: 127 KEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLM 186
Query: 302 TSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTAC 361
AR FDR C +V SWN++++ Y R K+Y E + L M R P +L+ VL+AC
Sbjct: 187 DMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSAC 246
Query: 362 ANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+ + D+ + +H Y+ +C+ +P + L +L+ YA CG MD+A +F +M ++V+SW
Sbjct: 247 SKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWT 306
Query: 422 SMIMGYGMHGQGE-------------------------------KALEMFMEMEKRGPTP 450
S++ GY G + ++LE+F EM+ G P
Sbjct: 307 SIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
++ T + VL+AC H G + G W + + KI+ V ++D+ + G ++++
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 511 VSKLPMEAGPALWGALLSACSTHSN-SELGKIVAQ-HLMELEPRDPGPYVLLSNIYASEG 568
+ + W A++ + + E K+ Q M ++P D +LS S
Sbjct: 426 FHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS-- 482
Query: 569 KWDEVENLRRIMKEKELEKAVGSSLVHPG 597
V+ R+ + + + SLVH G
Sbjct: 483 --GMVDQARKFFAKMRSDHRIEPSLVHYG 509
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 352 bits (904), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/547 (36%), Positives = 310/547 (56%), Gaps = 16/547 (2%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
+L+ + CS+++ F QI TQL+ L +D ++V+ L S S S + I+
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 120 -DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
+F NT++ S+ + + P + F Y+ ++ + +TFP + K C +REGK+
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTI-FAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
+H + K GF D++V+NSL+H Y VCGE +A KVF + PV D+V+W +I G+ +
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT-- 185
Query: 239 VGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFR----DVVSWNC 290
G +E D + D+ T+ ++ VG + G+ L+ R + + N
Sbjct: 186 -GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA 244
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-IRGDAKP 349
+ID Y K ++ A F + ++ VSWN +++ V C+ E + LF M KP
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 350 NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVF 409
+ L SVL+ACA++G +D G+W+H YI IK D + T+++ MYAKCG ++ A +F
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 410 DNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVL 469
+ + KNV +WN+++ G +HG G ++L F EM K G PN TF+ L+AC H G+V
Sbjct: 365 NGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 470 EGWWYFDLMQ-RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLS 528
EG YF M+ R Y + PK+EHYGCM+DLL RAGL+ ++ ELV +P++ + GA+LS
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILS 484
Query: 529 ACSTHSN-SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
AC EL K + +++E D G YVLLSNI+A+ +WD+V +RR+MK K + K
Sbjct: 485 ACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISK 544
Query: 588 AVGSSLV 594
GSS +
Sbjct: 545 VPGSSYI 551
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 311/555 (56%), Gaps = 20/555 (3%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLK--KLCTSLSSVSLSVLFFDGI 116
PIL +LE+C ++ E +Q+H ++ S + ++ SR++ C ++S + F+ I
Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
P ++ N++++ + +P AL FY E M+ K +++TFP + K C+G+R ++ G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQE-MLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
VH +VK GFE++++V L+HMY CGEV +VFED P W++V W S+I G+V N
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 237 REVGFARELFDFMPERDIFTWNSMISGYV-------DVGDMEAANGLFDLMPFR------ 283
A E F M + +++ + D+ + +G + F
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 284 ---DVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
+V+ +ID YAK G++ +AR FD M R +VSWN ++ Y + D E L +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
M+ P++ + +SV+ A G +GQ IH+Y+ K D + +L+ MYAK G
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTG 366
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG-PTPNDATFICVL 459
+ A+ F+++ +K+ ++W +I+G HG G +AL +F M+++G TP+ T++ VL
Sbjct: 367 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
AC+H G+V EG YF M+ ++ +EP VEHYGCMVD+L RAG ++E LV +P++
Sbjct: 427 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPN 486
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+WGALL+ C H N EL + + E E G YVLLSNIYA G+W +V+ +R
Sbjct: 487 VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRES 546
Query: 580 MKEKELEKAVGSSLV 594
MK K ++K +G S V
Sbjct: 547 MKSKRVDKVLGHSSV 561
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 330/615 (53%), Gaps = 46/615 (7%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQ--DSFAASRVLKKLCTSLSSVSLSVLFFD 114
++ IL+KL C ++ Q+H +L + ++ +SF + + + S +L+V F
Sbjct: 12 ANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSS-SINLSYALNV--FS 68
Query: 115 GI-QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSL 173
I P++ + N ++ ++P + FY +++ + ++F + K + + +L
Sbjct: 69 SIPSPPESIVFNPFLRDLSRSSEPRATILFY-QRIRHVGGRLDQFSFLPILKAVSKVSAL 127
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGY 233
EG ++H K D FV + MY+ CG + AR VF++ D+VTWN+MI+ Y
Sbjct: 128 FEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERY 187
Query: 234 VK-----------------------------------NREVGFARELFDFMPERDI---- 254
+ + + R +++F+ E D+
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
++++ Y G M+ A F M R++ M+ GY+K G + A+ FD+ +
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
++V W +++ YV E LR+F+ M KP+ S+ SV++ACAN+G++D +W+H
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
S I ++ ++ ++ +L+ MYAKCG +D R+VF+ M +NVVSW+SMI MHG+
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEAS 427
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
AL +F M++ PN+ TF+ VL C+H+G+V EG F M Y I PK+EHYGCM
Sbjct: 428 DALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDP 554
VDL GRA L+R++ E++ +P+ + +WG+L+SAC H ELGK A+ ++ELEP
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Query: 555 GPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKC 614
G VL+SNIYA E +W++V N+RR+M+EK + K G S + + E ++ + +
Sbjct: 548 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 607
Query: 615 IVYSMLGEIGAQMKM 629
+Y+ L E+ +++K+
Sbjct: 608 EIYAKLDEVVSKLKL 622
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 294/536 (54%), Gaps = 39/536 (7%)
Query: 65 ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSL-SSVSLSVLFFDGIQEPDAFM 123
++C ++ QIH ++V+GL + ++ S+ ++ + FD I +PD +
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
CN +++ P +S Y E M + V + YTF + K C+ + G H ++
Sbjct: 80 CNHVLRGSAQSMKPEKTVSLYTE-MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
V+ GF L+ +V+N+LI ++ CG++ G A
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDL-------------------------------GIAS 167
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
ELFD + W+SM SGY G ++ A LFD MP++D V+WN MI G K + S
Sbjct: 168 ELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDS 227
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
AR FDR ++VV+WN +++ YV C E L +F M P+ +++S+L+ACA
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 364 MGVIDIGQWIHSYI-QKCRIKPDVLLST----SLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+G ++ G+ +H YI + + + + T +L+ MYAKCG +D A VF + ++++
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+WN++I+G +H E ++EMF EM++ PN+ TFI V+ AC+H+G V EG YF LM
Sbjct: 348 TWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ +Y IEP ++HYGCMVD+LGRAG + ++ V + +E +W LL AC + N EL
Sbjct: 407 RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
GK + L+ + + G YVLLSNIYAS G+WD V+ +R++ + ++K G SL+
Sbjct: 467 GKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 132/320 (41%), Gaps = 42/320 (13%)
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A FD + +V N +L + + + L+ M + P+ + VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
AC+ + G H + + + + +L+ +A CG + +A +FD+ + + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
+W+SM GY G+ ++A+ +F EM P + + +++ C + FD
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 479 QRIYKIEPKVEHYGCMV----------DLLGRAGLMRDSEE---LVSKLPMEAGPALWGA 525
E V + M+ + LG MRD+ E +V+ L +
Sbjct: 236 -----TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL----------S 280
Query: 526 LLSACSTHSNSELGKIVAQHLMELEPRDPGPYV------LLSNIYASEGKWDEVENLRRI 579
LLSAC+ + E GK + +++E YV L ++YA G D + R
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 580 MKEKELEK----AVGSSLVH 595
+K+++L VG +L H
Sbjct: 341 VKDRDLSTWNTLIVGLALHH 360
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 205/652 (31%), Positives = 330/652 (50%), Gaps = 81/652 (12%)
Query: 57 SHPILQKLESCSTVK----EFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
S P + L+SC K +H ++ SG S + F +R++ + S+
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY-SKCGSLEDGRQV 77
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFY----------YEKMMAKFVEH------- 155
FD + + + + N+++ L A S + + M++ F +H
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 156 -------------NHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMY 202
N Y+F + C+G+ + +G +VH+ I K F D+++ ++L+ MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 203 SVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPE----------- 251
S CG V DA++VF++ ++V+WNS+I + +N A ++F M E
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 252 -----------------------------RDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
DI N+ + Y ++ A +FD MP
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
R+V++ MI GYA + +AR F +M RNVVSWN L+A Y + + E L LF +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIK------PDVLLSTSLLTMY 396
R P S ++L ACA++ + +G H ++ K K D+ + SL+ MY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 397 AKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFI 456
KCG ++ VF M E++ VSWN+MI+G+ +G G +ALE+F EM + G P+ T I
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
VLSAC HAG V EG YF M R + + P +HY CMVDLLGRAG + +++ ++ ++PM
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 517 EAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENL 576
+ +WG+LL+AC H N LGK VA+ L+E+EP + GPYVLLSN+YA GKW++V N+
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 577 RRIMKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMK 628
R+ M+++ + K G S + +V++ RK ++S+L + A+M+
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 254/403 (63%), Gaps = 1/403 (0%)
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
D R S+IH G V +AR++F++ ++TW +M+ GY +N V AR++FD MP
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 251 ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
E+ +W SM+ GYV G +E A LF++MP + V++ N MI G + G + AR FD
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDS 290
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M RN SW ++ ++ R E L LF M + +P +L+S+L+ CA++ + G
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ +H+ + +C+ DV +++ L+TMY KCG + ++ +FD K+++ WNS+I GY H
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 431 GQGEKALEMFMEMEKRGPT-PNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVE 489
G GE+AL++F EM G T PN+ TF+ LSAC++AGMV EG ++ M+ ++ ++P
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 490 HYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMEL 549
HY CMVD+LGRAG ++ E++ + +E A+WG+LL AC THS ++ + A+ L+E+
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 550 EPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
EP + G Y+LLSN+YAS+G+W +V LR++MK + + K+ G S
Sbjct: 531 EPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 150/286 (52%), Gaps = 16/286 (5%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIF 255
N I S G++ +ARK+F+ + +WNSM+ GY N AR+LFD MP+R+I
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
+WN ++SGY+ G+++ A +FDLMP R+VVSW ++ GY G V A + F +M +N
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHS 375
VSW ++L +++ + +L++ + D + S++ G +D + I
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKD----NIARTSMIHGLCKEGRVDEAREIFD 196
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
+ + V+ T+++T Y + +D AR +FD M EK VSW SM+MGY +G+ E
Sbjct: 197 EMS----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 436 ALEMFMEMEKRGPTPNDATFIC--VLSACTHAGMVLEGWWYFDLMQ 479
A E+F M P C ++S G + + FD M+
Sbjct: 253 AEELFEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 41/299 (13%)
Query: 256 TWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRN 315
T N I+ +G + A LFD + + SWN M+ GY AR FD M RN
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 316 VVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQ---W 372
++SWN L++ Y++ + E ++FD M + N S +++ + G +D+ + W
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 373 -------------IHSYIQKCRI-----------KPDVLLSTSLLTMYAKCGVMDLARNV 408
+ ++Q RI D + TS++ K G +D AR +
Sbjct: 135 KMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
FD M+E++V++W +M+ GYG + + + A ++F M P + ++ +L G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQNGRI 250
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
+ F++M ++P + M+ LG+ G + + + + E A W ++
Sbjct: 251 EDAEELFEVM----PVKPVIA-CNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 159 TFPLLGK---VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVF 215
TFP L VCA + SL GK+VHA++V+C F++D++V + L+ MY CGE++ ++ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 216 EDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP-----ERDIFTWNSMIS-----GYV 265
+ P D++ WNS+I GY + A ++F MP + + T+ + +S G V
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 266 DVG--DMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNIL 322
+ G E+ +F + P + CM+D + G A D M + + W L
Sbjct: 450 EEGLKIYESMESVFGVKPI--TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 323 LA 324
L
Sbjct: 508 LG 509
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 299/541 (55%), Gaps = 24/541 (4%)
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKV 166
+L+ LF + + D F N+++ D AL + M + +FP K
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEAL-LAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 167 CAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTW 226
C+ + + GK+ H + G++ D+FV ++LI MYS CG++ DARKVF++ P ++V+W
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 227 NSMIDGYVKNREVGFARELF-----DFMPERDIFTWNSMISGYVDV----------GDME 271
SMI GY N A LF D + D +SM G V V G E
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM--GLVSVISACSRVPAKGLTE 203
Query: 272 AANGLFDLMPF-RDVVSWNCMIDGYAK--IGNVTSARNCFDRMCMRNVVSWNILLALYVR 328
+ + F R V N ++D YAK G V AR FD++ ++ VS+N ++++Y +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 329 CKDYCECLRLFDRMIRGDAKP-NEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
E +F R+++ N +L +VL A ++ G + IG+ IH + + ++ DV+
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+ TS++ MY KCG ++ AR FD M KNV SW +MI GYGMHG KALE+F M G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN TF+ VL+AC+HAG+ +EGW +F+ M+ + +EP +EHYGCMVDLLGRAG ++ +
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+L+ ++ M+ +W +LL+AC H N EL +I L EL+ + G Y+LLS+IYA
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADA 503
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLVH-PGEFASESIVENCPPHRKCIVYSMLGEIGAQ 626
G+W +VE +R IMK + L K G SL+ GE I + P R+ I Y L E+ +
Sbjct: 504 GRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKI-YEFLAELNRK 562
Query: 627 M 627
+
Sbjct: 563 L 563
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 106 VSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGK 165
V+++ FD I + D N+IM + A + + K V N T +
Sbjct: 236 VAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL 295
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
+ +LR GK +H ++++ G E D+ V S+I MY CG V ARK F+ ++ +
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS 355
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGD-------MEAAN 274
W +MI GY + A ELF M + + T+ S+++ G A
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Query: 275 GLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
G F + P + + CM+D + G + A + RM M+ + + W+ LLA
Sbjct: 416 GRFGVEP--GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 311/594 (52%), Gaps = 66/594 (11%)
Query: 15 LSLDKFIKSQ-KNLPKTPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEF 73
L KF K Q + + + PKL ++ P+ T + Q L++ ++
Sbjct: 11 LHFPKFRKFQSRKVSSSLPKLELDQKSPQET------------VFLLGQVLDTYPDIRTL 58
Query: 74 HQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLM 133
+H+++++ L +S ++++ SL V+ + FD I E + + N +++S++
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAY-ASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 134 LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLF 193
N +G + M V +HYTFP + K C+ ++ G+K+H K G LF
Sbjct: 118 -NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V N L+ MY CG + +AR V ++ M RD
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDE-------------------------------MSRRD 205
Query: 254 IFTWNSMISGYVDVGDMEAANGLFD--LMPFRDVVSWNCMIDG-----------YAKIGN 300
+ +WNS++ GY A N FD L R++ S D N
Sbjct: 206 VVSWNSLVVGY-------AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
V ++ F +M +++VSWN+++ +Y++ E + L+ RM +P+ S+ SVL A
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
C + + +G+ IH YI++ ++ P++LL +L+ MYAKCG ++ AR+VF+NM ++VVSW
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
+MI YG G+G A+ +F +++ G P+ F+ L+AC+HAG++ EG F LM
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
YKI P++EH CMVDLLGRAG ++++ + + ME +WGALL AC HS++++G
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+ A L +L P G YVLLSNIYA G+W+EV N+R IMK K L+K G+S V
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 293/535 (54%), Gaps = 36/535 (6%)
Query: 54 VDLSHPILQKL-ESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLF 112
+ L+ P L+K+ + CST K ++ + L+QD ++ + CTS + L+V
Sbjct: 24 LSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITA-CTSFKRLDLAVST 82
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
+QEP+ F+ N + K F+ + P +L Y +M+ V + YT+ L K A +
Sbjct: 83 MTQMQEPNVFVYNALFKGFVTCSHPIRSLELYV-RMLRDSVSPSSYTYSSLVK--ASSFA 139
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDG 232
R G+ + A I K GF + ++ +LI YS G + +ARKV
Sbjct: 140 SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV------------------ 181
Query: 233 YVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
FD MPERD W +M+S Y V DM++AN L + M ++ + NC+I
Sbjct: 182 -------------FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 228
Query: 293 DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
+GY +GN+ A + F++M +++++SW ++ Y + K Y E + +F +M+ P+E
Sbjct: 229 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 288
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
++ +V++ACA++GV++IG+ +H Y + DV + ++L+ MY+KCG ++ A VF N+
Sbjct: 289 TMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
+KN+ WNS+I G HG ++AL+MF +ME PN TF+ V +ACTHAG+V EG
Sbjct: 349 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 408
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACST 532
+ M Y I VEHYG MV L +AGL+ ++ EL+ + E +WGALL C
Sbjct: 409 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 468
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
H N + +I LM LEP + G Y LL ++YA + +W +V +R M+E +EK
Sbjct: 469 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 523
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 290/527 (55%), Gaps = 8/527 (1%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+HT ++ +GL + + S L L +V + + FD + N+++ +
Sbjct: 215 QVHTVVVKNGLDK-TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFV 194
AL +Y M +V + +F + K+CA ++ LR +++H +VK GF D +
Sbjct: 274 GLDLEALGMFYS-MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 195 RNSLIHMYSVCGEVLDARKVFED-GPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
R +L+ YS C +LDA ++F++ G V ++V+W +MI G+++N A +LF M +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 254 I----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+ FT++ +++ + E + R ++D Y K+G V A F
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGV-ID 368
+ +++V+W+ +LA Y + + +++F + +G KPNE + S+L CA +
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 369 IGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ H + K R+ + +S++LLTMYAK G ++ A VF EK++VSWNSMI GY
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 429 MHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKV 488
HGQ KAL++F EM+KR + TFI V +ACTHAG+V EG YFD+M R KI P
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 489 EHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLME 548
EH CMVDL RAG + + +++ +P AG +W +L+AC H +ELG++ A+ ++
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 692
Query: 549 LEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH 595
++P D YVLLSN+YA G W E +R++M E+ ++K G S +
Sbjct: 693 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/546 (24%), Positives = 236/546 (43%), Gaps = 71/546 (13%)
Query: 113 FDGIQEPDAFMCNTIMKSFLM--LNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
FD ++E + T++ + +ND L + +M + + N +TF V A
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTL---FMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 171 RSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMI 230
G +VH +VK G + + V NSLI++Y CG V AR +F+ V +VTWNSMI
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 231 DGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGL---FDLMPFR---- 283
GY N G E + SM YV + + A+ + +L R
Sbjct: 268 SGYAAN---GLDLEALGM--------FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 284 ---DVVSWNCMID---------GYAKIGNVTSARNCFDRM-CMRNVVSWNILLALYVRCK 330
VV + + D Y+K + A F + C+ NVVSW +++ +++
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 331 DYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST 390
E + LF M R +PNE + +LTA + VI + +H+ + K + + T
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGT 432
Query: 391 SLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTP 450
+LL Y K G ++ A VF + +K++V+W++M+ GY G+ E A++MF E+ K G P
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 451 NDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL 510
N+ TF +L+ C + F +++ + ++ + + G + +EE
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE- 551
Query: 511 VSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKW 570
V K E W +++S + H + V + + + + + G V ++A+
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG--VTFIGVFAA---- 605
Query: 571 DEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENC-----PPHRKCIV--YSMLGEI 623
+ LV GE + +V +C H C+V YS G++
Sbjct: 606 -----------------CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 624 GAQMKM 629
MK+
Sbjct: 649 EKAMKV 654
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 205/456 (44%), Gaps = 52/456 (11%)
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVK 235
G+++H + +K GF D+ V SL+ Y D RKVF++ ++VTW ++I GY +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 236 N-------------REVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPF 282
N + G F F + + + V + NGL +P
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM 342
N +I+ Y K GNV AR FD+ +++VV+WN +++ Y E L +F M
Sbjct: 232 S-----NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 343 IRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVM 402
+ +E+S SV+ CAN+ + + +H + K D + T+L+ Y+KC M
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 403 DLARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSA 461
A +F + NVVSW +MI G+ + E+A+++F EM+++G PN+ T+ +L+A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 462 C-------THAGMVLE--------GWWYFDLMQRIYKIEPKVEHYGCMVD--------LL 498
HA +V G D ++ K+E + + + D +L
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 499 GRAGLMRDSEELV------SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
++E + +K ++ + ++L+ C+ +N+ +G+ H ++ R
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA-TNASMGQGKQFHGFAIKSR 525
Query: 553 DPGPYVLLS---NIYASEGKWDEVENLRRIMKEKEL 585
+ S +YA +G + E + + +EK+L
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 8/263 (3%)
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF----DFMPERDIFTWNSMISGYV 265
+A +F+ P D ++ S++ G+ ++ A+ LF E D ++S++
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 266 DVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ D L DV ++D Y K N R FD M RNVV+W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
L++ Y R E L LF RM +PN + + L A GV G +H+ + K
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
+ + +S SL+ +Y KCG + AR +FD K+VV+WNSMI GY +G +AL MF
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 442 EMEKRGPTPNDATFICVLSACTH 464
M ++++F V+ C +
Sbjct: 285 SMRLNYVRLSESSFASVIKLCAN 307
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 7/237 (2%)
Query: 298 IGNVTSAR-----NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEA 352
G V+S+R N FD+ R+ S+ LL + R E RLF + R + + +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 353 SLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
SVL A + G+ +H K DV + TSL+ Y K R VFD M
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 413 TEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGW 472
E+NVV+W ++I GY + ++ L +FM M+ G PN TF L G+ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 473 WYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
++ + ++ + +++L + G +R + L K +++ W +++S
Sbjct: 215 QVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISG 269
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 308/571 (53%), Gaps = 20/571 (3%)
Query: 75 QIHTQLLVSGL--SQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSF- 131
QIH LL S + ++ SR+L++ CT+ + + +Q + ++++ F
Sbjct: 19 QIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFS 78
Query: 132 --LMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFE 189
+ LN L+ Y M V + +TFP L K +R + HA IVK G +
Sbjct: 79 GGITLNRRLSFLA--YRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLD 135
Query: 190 LDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFM 249
D FVRNSLI YS G A ++F+ D+VTW +MIDG+V+N A F M
Sbjct: 136 SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 250 PERDI----FTWNSMISGYVDVGDME---AANGLFDLMPFR---DVVSWNCMIDGYAKIG 299
+ + T S++ V D+ + +GL+ L R DV + ++D Y K
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY-LETGRVKCDVFIGSSLVDMYGKCS 254
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLT 359
A+ FD M RNVV+W L+A YV+ + + + + +F+ M++ D PNE +L SVL+
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 360 ACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS 419
ACA++G + G+ +H Y+ K I+ + T+L+ +Y KCG ++ A VF+ + EKNV +
Sbjct: 315 ACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT 374
Query: 420 WNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
W +MI G+ HG A ++F M +PN+ TF+ VLSAC H G+V EG F M+
Sbjct: 375 WTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK 434
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELG 539
+ +EPK +HY CMVDL GR GL+ +++ L+ ++PME +WGAL +C H + ELG
Sbjct: 435 GRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELG 494
Query: 540 KIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVH-PGE 598
K A +++L+P G Y LL+N+Y+ WDEV +R+ MK++++ K+ G S + G+
Sbjct: 495 KYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGK 554
Query: 599 FASESIVENCPPHRKCIVYSMLGEIGAQMKM 629
++ P +Y L +G QM++
Sbjct: 555 LCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 266/477 (55%), Gaps = 46/477 (9%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
T+ L +VC+ R+L EGKKVH I GF + + N L+ MY+ CG ++DARKVF++
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 219 PVWDLVTWNSMIDGYVKNREVGF---ARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
P DL +WN M++GY EVG AR+LFD M E+D ++W +M++GYV E A
Sbjct: 147 PNRDLCSWNVMVNGYA---EVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALV 203
Query: 276 LFDLMPF----------------------------------------RDVVSWNCMIDGY 295
L+ LM D V W+ ++D Y
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263
Query: 296 AKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLM 355
K G + ARN FD++ ++VVSW ++ Y + + E LF ++ +PNE +
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA 323
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK 415
VL ACA++ ++G+ +H Y+ + P S+SL+ MY KCG ++ A++V D +
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP 383
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
++VSW S+I G +GQ ++AL+ F + K G P+ TF+ VLSACTHAG+V +G +F
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Query: 476 DLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSN 535
+ +++ +HY C+VDLL R+G + ++S++PM+ LW ++L CST+ N
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Query: 536 SELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
+L + AQ L ++EP +P YV ++NIYA+ GKW+E +R+ M+E + K GSS
Sbjct: 504 IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 176/368 (47%), Gaps = 17/368 (4%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E D++ ++ ++ + P AL Y N +T + A ++
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
+R GK++H IV+ G + D + +SL+ MY CG + +AR +F+ D+V+W SMID
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 232 GYVKN---REVGFA--RELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM------ 280
Y K+ RE GF+ EL + +T+ +++ D+ E + M
Sbjct: 293 RYFKSSRWRE-GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 281 PFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFD 340
P+ S ++D Y K GN+ SA++ D ++VSW L+ + E L+ FD
Sbjct: 352 PYSFASS--SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+++ KP+ + ++VL+AC + G+++ G ++ +S +K R+ T L+ + A+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 400 GVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICV 458
G + ++V M K + W S++ G +G + A E E+ K P N T++ +
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENPVTYVTM 528
Query: 459 LSACTHAG 466
+ AG
Sbjct: 529 ANIYAAAG 536
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 348 KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARN 407
KP ++ +++ C+ ++ G+ +H +I+ P +++ LL MYAKCG + AR
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 408 VFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGM 467
VFD M +++ SWN M+ GY G E+A ++F EM ++ + ++ +++
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQ 197
Query: 468 VLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEEL---VSKLPMEAGPALWG 524
E + LMQR+ P + V +R +E+ + + +++ LW
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 525 ALLS-----ACSTHSNSELGKIVAQHLM 547
+L+ C + + KIV + ++
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVV 285
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 253/413 (61%), Gaps = 3/413 (0%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E ++ NS++ G + +A +FE P D+V+W +M+DG KN +V AR LFD
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
MPER+I +WN+MI+GY ++ A+ LF +MP RD SWN MI G+ + + A F
Sbjct: 228 MPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF 287
Query: 309 DRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEASLMSVLTACANMGVI 367
DRM +NV+SW ++ YV K+ E L +F +M+R G KPN + +S+L+AC+++ +
Sbjct: 288 DRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDN--MTEKNVVSWNSMIM 425
GQ IH I K + + +++++LL MY+K G + AR +FDN + +++++SWNSMI
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
Y HG G++A+EM+ +M K G P+ T++ +L AC+HAG+V +G +F + R +
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
+ EHY C+VDL GRAG ++D ++ + +GA+LSAC+ H+ + K V +
Sbjct: 468 LREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKK 527
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
++E D G YVL+SNIYA+ GK +E +R MKEK L+K G S V G+
Sbjct: 528 VLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGK 580
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 189/360 (52%), Gaps = 28/360 (7%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGF-ELDLFVRNSLIHMYSVCGEVLDARKVFED-GP 219
L+G++C + GK AR + G E D+ +I Y G++ +AR++F+
Sbjct: 52 LIGELC------KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS 105
Query: 220 VWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDL 279
++VTW +M+ GY++++++ A LF MPER++ +WN+MI GY G ++ A LFD
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 280 MPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
MP R++VSWN M+ + G + A N F+RM R+VVSW ++ + E RLF
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLST--SLLTMYA 397
D M + N S +++T A ID Q ++ P+ ++ +++T +
Sbjct: 226 DCM----PERNIISWNAMITGYAQNNRIDEAD------QLFQVMPERDFASWNTMITGFI 275
Query: 398 KCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPT-PNDATFI 456
+ M+ A +FD M EKNV+SW +MI GY + + E+AL +F +M + G PN T++
Sbjct: 276 RNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 457 CVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+LSAC+ ++EG Q+I+++ K H + + S EL++ M
Sbjct: 336 SILSACSDLAGLVEG-------QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FD + E + T++ ++ + AL+ + + + V+ N T+ + C+ +
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPV--WDLVTWNSM 229
L EG+++H I K + + V ++L++MYS GE++ ARK+F++G V DL++WNSM
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 230 IDGYVKNREVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLF-DL----- 279
I Y + A E+++ M + T+ +++ G +E F DL
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 280 MPFRDVVSWNCMID--GYA-KIGNVTSARNCFDRMCMRN 315
+P R+ + C++D G A ++ +VT+ NC D R+
Sbjct: 466 LPLRE-EHYTCLVDLCGRAGRLKDVTNFINCDDARLSRS 503
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 383 KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFME 442
+P V L+ K G + AR +FD + E++VV+W +I GY G +A E+F
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR 102
Query: 443 MEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAG 502
++ R N T+ ++S + + F M E V + M+D ++G
Sbjct: 103 VDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMP-----ERNVVSWNTMIDGYAQSG 154
Query: 503 LMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKI-VAQHLMELEP-RDPGPYVLL 560
+ + EL ++P E W +++ A + G+I A +L E P RD + +
Sbjct: 155 RIDKALELFDEMP-ERNIVSWNSMVKAL-----VQRGRIDEAMNLFERMPRRDVVSWTAM 208
Query: 561 SNIYASEGKWDEVENLRRIMKEKEL 585
+ A GK DE L M E+ +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNI 233
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 242/393 (61%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G V +AR +F++ ++VTW +MI GY +N V AR+LF+ MPE+ +W SM+ GY
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 266 DVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLAL 325
G +E A F++MP + V++ N MI G+ ++G ++ AR FD M R+ +W ++
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 326 YVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPD 385
Y R E L LF +M + +P+ SL+S+L+ CA + + G+ +H+++ +C+ D
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 386 VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEK 445
V +++ L+TMY KCG + A+ VFD + K+++ WNS+I GY HG GE+AL++F EM
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 446 RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMR 505
G PN T I +L+AC++AG + EG F+ M+ + + P VEHY C VD+LGRAG +
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVD 485
Query: 506 DSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYA 565
+ EL+ + ++ +WGALL AC THS +L ++ A+ L E EP + G YVLLS+I A
Sbjct: 486 KAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545
Query: 566 SEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
S KW +V +R+ M+ + K G S + G+
Sbjct: 546 SRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGK 578
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 31/374 (8%)
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
V C FE+ R G++ +ARK F+ + +WNS++ GY N AR
Sbjct: 18 VNCSFEISRLSR---------IGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEAR 68
Query: 244 ELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTS 303
+LFD M ER++ +WN ++SGY+ + A +F+LMP R+VVSW M+ GY + G V
Sbjct: 69 QLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGE 128
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
A + F RM RN VSW ++ + + +L+D M D + +++
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----VASTNMIGGLCR 184
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
G +D + I ++ + +V+ T+++T Y + +D+AR +F+ M EK VSW SM
Sbjct: 185 EGRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSM 240
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
++GY + G+ E A E F M + +A + G + + FDLM+
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV----GFGEVGEISKARRVFDLME---- 292
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPME----AGPALWGALLSACSTHSNSELG 539
+ + M+ R G ++ +L +++ + + P+L ++LS C+T ++ + G
Sbjct: 293 -DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLI-SILSVCATLASLQYG 350
Query: 540 KIVAQHLMELEPRD 553
+ V HL+ + D
Sbjct: 351 RQVHAHLVRCQFDD 364
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 103 LSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPL 162
+ +S + FD +++ D ++K++ AL + + M + V + +
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ-MQKQGVRPSFPSLIS 336
Query: 163 LGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWD 222
+ VCA + SL+ G++VHA +V+C F+ D++V + L+ MY CGE++ A+ VF+ D
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 223 LVTWNSMIDGYVKNREVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGLFD 278
++ WNS+I GY + A ++F MP T ++++ G +E +F+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 279 LMPFRDVVS-----WNCMIDGYAKIGNVTSARNCFDRMCMR-NVVSWNILLA 324
M + V+ ++C +D + G V A + M ++ + W LL
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 306/569 (53%), Gaps = 10/569 (1%)
Query: 69 TVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIM 128
TV QIH L+ L D+F + +LK+ S L F Q P+ F+ N+++
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKR-TLFFRQTKYSYLLFSHTQFPNIFLYNSLI 83
Query: 129 KSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGF 188
F+ + L + H +TFPL+ K C S + G +H+ +VKCGF
Sbjct: 84 NGFVNNHLFHETLDLFLSIRKHGLYLHG-FTFPLVLKACTRASSRKLGIDLHSLVVKCGF 142
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
D+ SL+ +YS G + DA K+F++ P +VTW ++ GY + A +LF
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 249 MPER----DIFTWNSMISGYVDVGDMEAANGLFDLMP----FRDVVSWNCMIDGYAKIGN 300
M E D + ++S V VGD+++ + M ++ +++ YAK G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 301 VTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTA 360
+ AR+ FD M +++V+W+ ++ Y E + LF +M++ + KP++ S++ L++
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 361 CANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSW 420
CA++G +D+G+W S I + ++ ++ +L+ MYAKCG M VF M EK++V
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 421 NSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
N+ I G +G + + +F + EK G +P+ +TF+ +L C HAG++ +G +F+ +
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 481 IYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGK 540
+Y ++ VEHYGCMVDL GRAG++ D+ L+ +PM +WGALLS C +++L +
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 541 IVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFA 600
V + L+ LEP + G YV LSNIY+ G+WDE +R +M +K ++K G S +
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Query: 601 SESIVENCPPHRKCIVYSMLGEIGAQMKM 629
E + ++ +Y+ L ++G +M++
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 241/407 (59%), Gaps = 1/407 (0%)
Query: 189 ELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDF 248
E D F N ++ Y A+ F+ P D +WN+MI GY + E+ ARELF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 249 MPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCF 308
M E++ +WN+MISGY++ GD+E A+ F + P R VV+W MI GY K V A F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 309 DRMCM-RNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
M + +N+V+WN +++ YV + L+LF M+ +PN + L S L C+ + +
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 368 DIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGY 427
+G+ IH + K + DV TSL++MY KCG + A +F+ M +K+VV+WN+MI GY
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 428 GMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPK 487
HG +KAL +F EM P+ TF+ VL AC HAG+V G YF+ M R YK+EP+
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420
Query: 488 VEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLM 547
+HY CMVDLLGRAG + ++ +L+ +P A++G LL AC H N EL + A+ L+
Sbjct: 421 PDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 480
Query: 548 ELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
+L ++ YV L+NIYAS+ +W++V +R+ MKE + K G S +
Sbjct: 481 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 28/321 (8%)
Query: 227 NSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV-DVGDMEAANGLFDLMPFRDV 285
N +I V++ ++ A +F M ++ TWNS++ G D M A+ LFD +P D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
S+N M+ Y + N A++ FDRM ++ SWN ++ Y R + + LF M+
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM-- 182
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP--DVLLSTSLLTMYAKCGVMD 403
+ NE S ++++ G D+ + H + ++ P V+ T+++T Y K ++
Sbjct: 183 --EKNEVSWNAMISGYIECG--DLEKASHFF----KVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 404 LARNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSAC 462
LA +F +MT KN+V+WN+MI GY + + E L++F M + G PN + L C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPK------VEHYGCMVDLLGRAGLMRDSEELVSKLPM 516
+ + L ++I++I K V ++ + + G + D+ +L +
Sbjct: 295 SELSAL-------QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 517 EAGPALWGALLSACSTHSNSE 537
+ A W A++S + H N++
Sbjct: 348 KDVVA-WNAMISGYAQHGNAD 367
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 81/342 (23%)
Query: 112 FFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIR 171
FFD + DA NT++ + + A +Y M E N ++
Sbjct: 146 FFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM-----EKNEVSW----------- 189
Query: 172 SLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMID 231
N++I Y CG++ A F+ PV +V W +MI
Sbjct: 190 ------------------------NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMIT 225
Query: 232 GYVKNREVGFARELF-DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLM---------- 280
GY+K ++V A +F D +++ TWN+MISGYV+ E LF M
Sbjct: 226 GYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 281 -----------------------------PFRDVVSWNCMIDGYAKIGNVTSARNCFDRM 311
DV + +I Y K G + A F+ M
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 312 CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG- 370
++VV+WN +++ Y + + + L LF MI +P+ + ++VL AC + G+++IG
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNM 412
+ S ++ +++P T ++ + + G ++ A + +M
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 162 LLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW 221
LLG C+ + +L+ G+++H + K D+ SLI MY CGE+ DA K+FE
Sbjct: 291 LLG--CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 222 DLVTWNSMIDGYVK----NREVGFARELFDFMPERDIFTWNSMI-----SGYVDVG--DM 270
D+V WN+MI GY + ++ + RE+ D D T+ +++ +G V++G
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 271 EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
E+ + + P D + CM+D + G + A M R
Sbjct: 409 ESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 376 YIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGE 434
Y+ K + + ++ + G +D A VF M KN ++WNS+++G +
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+A ++F E+ P P+ ++ +LS + +FD M +K + M
Sbjct: 111 EAHQLFDEI----PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP--FK---DAASWNTM 161
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSA 529
+ R G M + EL + ME W A++S
Sbjct: 162 ITGYARRGEMEKARELFYSM-MEKNEVSWNAMISG 195
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 264/484 (54%), Gaps = 45/484 (9%)
Query: 153 VEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIH--MYSVCGEVLD 210
+EHN Y + C+ L K++HAR++K G D + + + S + L
Sbjct: 10 LEHNLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 211 -ARKVFEDGPVWDLVTWNSMIDGYVKNRE-----VGFARELFDFMP-------------- 250
A+ VF+ D WN MI G+ + E + + R L P
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 251 --------------------ERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNC 290
E D++ NS+I+ Y G+ + A+ LFD +P D VSWN
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
+I GY K G + A F +M +N +SW +++ YV+ E L+LF M D +P+
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
SL + L+ACA +G ++ G+WIHSY+ K RI+ D +L L+ MYAKCG M+ A VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
N+ +K+V +W ++I GY HG G +A+ FMEM+K G PN TF VL+AC++ G+V E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G F M+R Y ++P +EHYGC+VDLLGRAGL+ +++ + ++P++ +WGALL AC
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H N ELG+ + + L+ ++P G YV +NI+A + KWD+ RR+MKE+ + K G
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 591 SSLV 594
S +
Sbjct: 487 CSTI 490
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 208/427 (48%), Gaps = 47/427 (11%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSS--VSLSVLFFDGIQEPDA 121
L+ CS +E QIH ++L +GL QDS+A ++ L +S SS + + + FDG PD
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 122 FMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHA 181
F+ N +++ F ++P +L Y++M+ HN YTFP L K C+ + + E ++HA
Sbjct: 81 FLWNLMIRGFSCSDEPERSL-LLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 182 RIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF 241
+I K G+E D++ NSLI+ Y+V G A +F+ P D V+WNS+I GYVK ++
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 242 ARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWN------------ 289
A LF M E++ +W +MISGYV + A LF M DV N
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 290 ---------------------------CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
+ID YAK G + A F + ++V +W L
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCR 381
++ Y E + F M + KPN + +VLTAC+ G+++ G+ I +S +
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEK-NVVSWNSMIMGYGMHGQ---GEKAL 437
+KP + ++ + + G++D A+ M K N V W +++ +H GE+
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIG 439
Query: 438 EMFMEME 444
E+ + ++
Sbjct: 440 EILIAID 446
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 292/553 (52%), Gaps = 67/553 (12%)
Query: 59 PILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQE 118
P LQ+++S + E+ +I+ +++ GLSQ SF ++++ C + + + F+ +
Sbjct: 15 PFLQRVKSRN---EWKKINASIIIHGLSQSSFMVTKMVD-FCDKIEDMDYATRLFNQVSN 70
Query: 119 PDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKK 178
P+ F+ Y ++ + ++ Y C IR
Sbjct: 71 PNVFL---------------------YNSIIRAYTHNSLY--------CDVIR------- 94
Query: 179 VHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE 238
++ ++++ FEL R + M+ C S+ Y+ +
Sbjct: 95 IYKQLLRKSFELP--DRFTFPFMFKSCA---------------------SLGSCYLGKQV 131
Query: 239 VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
G L F P + T N++I Y+ D+ A+ +FD M RDV+SWN ++ GYA++
Sbjct: 132 HG---HLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVL 358
G + A+ F M + +VSW +++ Y Y E + F M +P+E SL+SVL
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVV 418
+CA +G +++G+WIH Y ++ + +L+ MY+KCGV+ A +F M K+V+
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVI 308
Query: 419 SWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLM 478
SW++MI GY HG A+E F EM++ PN TF+ +LSAC+H GM EG YFD+M
Sbjct: 309 SWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMM 368
Query: 479 QRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
++ Y+IEPK+EHYGC++D+L RAG + + E+ +PM+ +WG+LLS+C T N ++
Sbjct: 369 RQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDV 428
Query: 539 GKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
+ HL+ELEP D G YVLL+NIYA GKW++V LR++++ + ++K G SL+
Sbjct: 429 ALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488
Query: 599 FASESIV-ENCPP 610
E + +N P
Sbjct: 489 IVQEFVSGDNSKP 501
>sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protein At1g62260,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2
SV=1
Length = 656
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/550 (34%), Positives = 296/550 (53%), Gaps = 32/550 (5%)
Query: 66 SCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCN 125
SC ++ F + +L S+DSF+ + ++ + + ++L F+ + E +A +
Sbjct: 114 SCGGIR-FLEEARKLFDEMPSRDSFSWNTMISGYAKN-RRIGEALLLFEKMPERNAVSWS 171
Query: 126 TIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV-----H 180
++ F N + + KM K + PL V I++ R + +
Sbjct: 172 AMITGFCQ-NGEVDSAVVLFRKMPVK------DSSPLCALVAGLIKNERLSEAAWVLGQY 224
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP---------------VWDLVT 225
+V G E ++ N+LI Y G+V AR +F+ P ++V+
Sbjct: 225 GSLVS-GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283
Query: 226 WNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDV 285
WNSMI Y+K +V AR LFD M +RD +WN+MI GYV V ME A LF MP RD
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343
Query: 286 VSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRG 345
SWN M+ GYA +GNV AR+ F++ ++ VSWN ++A Y + KDY E + LF RM
Sbjct: 344 HSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Query: 346 DAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
KP+ +L S+L+A + + +G +H + K I PDV + +L+TMY++CG + +
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMES 462
Query: 406 RNVFDNMT-EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTH 464
R +FD M ++ V++WN+MI GY HG +AL +F M+ G P+ TF+ VL+AC H
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 465 AGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWG 524
AG+V E F M +YKIEP++EHY +V++ G ++ +++ +P E +WG
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 525 ALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKE 584
ALL AC ++N L + A+ + LEP PYVLL N+YA G WDE +R M+ K
Sbjct: 583 ALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKR 642
Query: 585 LEKAVGSSLV 594
++K GSS V
Sbjct: 643 IKKERGSSWV 652
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 202/440 (45%), Gaps = 56/440 (12%)
Query: 206 GEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYV 265
G + +AR +FE + VTWN+MI GYVK RE+ AR+LFD MP+RD+ TWN+MISGYV
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 266 DVGD---MEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNIL 322
G +E A LFD MP RD SWN MI GYAK + A F++M RN VSW+ +
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 323 LALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCR 381
+ + + + + LF +M D+ P L +++ + W+ Y
Sbjct: 174 ITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVS 229
Query: 382 IKPDVLLS-TSLLTMYAKCGVMDLARNVFDNMTE---------------KNVVSWNSMIM 425
+ D++ + +L+ Y + G ++ AR +FD + + KNVVSWNSMI
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
Y G A +F +M+ R + ++ ++ H + + + F M
Sbjct: 290 AYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMP-----N 340
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
+ MV G + + K P E W ++++A N + + V
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTP-EKHTVSWNSIIAA--YEKNKDYKEAVDLF 397
Query: 546 L-MELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESI 604
+ M +E P P+ L S + AS G + NLR M+ ++ +++
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSASTG----LVNLRLGMQMHQI--------------VVKTV 439
Query: 605 VENCPPHRKCI-VYSMLGEI 623
+ + P H I +YS GEI
Sbjct: 440 IPDVPVHNALITMYSRCGEI 459
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 49/422 (11%)
Query: 196 NSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGF---ARELFDFMPER 252
N++I Y E+ ARK+F+ P D+VTWN+MI GYV + F AR+LFD MP R
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D F+WN+MISGY + A LF+ MP R+ VSW+ MI G+ + G V SA F +M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 313 MRNVVSWNILLALYVRCKDYCEC---LRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
+++ L+A ++ + E L + ++ G L N ++
Sbjct: 195 VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRED---------LVYAYNTLIVGY 245
Query: 370 GQWIHSYIQKC-------------------RIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
GQ +C R +V+ S++ Y K G + AR +FD
Sbjct: 246 GQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
M +++ +SWN+MI GY + E A +F EM P + ++ ++S G V
Sbjct: 306 QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM----PNRDAHSWNMMVSGYASVGNVEL 361
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEA---GPALWGALL 527
YF+ + + + ++ + +++ +L ++ +E P +LL
Sbjct: 362 ARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 528 SACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
SA + N LG + Q +++ D + L +Y+ G E+ RRI E +L++
Sbjct: 417 SASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCG---EIMESRRIFDEMKLKR 473
Query: 588 AV 589
V
Sbjct: 474 EV 475
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 393 LTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPND 452
L + G + AR++F+ + +N V+WN+MI GY + +A ++F M KR +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR----DV 102
Query: 453 ATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELV- 511
T+ ++S G G + + ++++ P + + + G A R E L+
Sbjct: 103 VTWNTMISGYVSCG----GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 512 -SKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYV-----LLSNIYA 565
K+P E W A+++ N E+ V ++ +D P L+ N
Sbjct: 159 FEKMP-ERNAVSWSAMITGFC--QNGEVDSAVVL-FRKMPVKDSSPLCALVAGLIKNERL 214
Query: 566 SEGKW 570
SE W
Sbjct: 215 SEAAW 219
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 312 bits (799), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 181/645 (28%), Positives = 314/645 (48%), Gaps = 108/645 (16%)
Query: 61 LQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L + +++ Q H Q+++ G D +++ ++L + L ++ + F +Q PD
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRL-SDLGAIYYARDIFLSVQRPD 82
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
F+ N +M+ F + P +LS + + ++ N T+ +G R R G+ +H
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH 142
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN---- 236
+ V G + +L + ++++ MY V DARKVF+ P D + WN+MI GY KN
Sbjct: 143 GQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 237 --------------------------------REVGFARELFDFMPERDIFTWNSMISGY 264
+E+ ++ + ++ + +++G+
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 265 VDV----GDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNV---- 316
+ + G ++ + LF D+V++N MI GY G + + F + +
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 317 --------VSWNILL------------------------ALYVRCKDYCECLRLFDR--- 341
VS +++L +Y + + +LFD
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 342 --------MIRG--------DA------------KPNEASLMSVLTACANMGVIDIGQWI 373
MI G DA PN ++ +L+ACA +G + +G+W+
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 374 HSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQG 433
H ++ + + +ST+L+ MYAKCG + AR +FD MT+KN V+WN+MI GYG+HGQG
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 434 EKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGC 493
++AL +F EM G TP TF+CVL AC+HAG+V EG F+ M Y EP V+HY C
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 494 MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRD 553
MVD+LGRAG ++ + + + + +E G ++W LL AC H ++ L + V++ L EL+P +
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 554 PGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGE 598
G +VLLSNI++++ + + +R+ K+++L KA G +L+ GE
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 311 bits (798), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 290/539 (53%), Gaps = 16/539 (2%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFM 123
L++C TV + ++IH L G D + A+ ++ L + +V + + FD + D
Sbjct: 160 LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIH-LYSRYKAVGNARILFDEMPVRDMGS 218
Query: 124 CNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARI 183
N ++ + + AL+ + + T L C G +H+
Sbjct: 219 WNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 184 VKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAR 243
+K G E +LFV N LI +Y+ G + D +KVF+ V DL++WNS+I Y N + A
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 244 ELFDFMP----ERDIFTWNSMISGYVDVGDMEAANGL--FDLMP---FRDVVSWNCMIDG 294
LF M + D T S+ S +GD+ A + F L D+ N ++
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 295 YAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR-GDAKPNEAS 353
YAK+G V SAR F+ + +V+SWN +++ Y + E + +++ M G+ N+ +
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
+SVL AC+ G + G +H + K + DV + TSL MY KCG ++ A ++F +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
N V WN++I +G HG GEKA+ +F EM G P+ TF+ +LSAC+H+G+V EG W
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTH 533
F++MQ Y I P ++HYGCMVD+ GRAG + + + + + ++ ++WGALLSAC H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 534 SNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
N +LGKI ++HL E+EP G +VLLSN+YAS GKW+ V+ +R I K L K G S
Sbjct: 634 GNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 261/518 (50%), Gaps = 22/518 (4%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNT 126
C+ ++ +H +L+VS Q+ +++++ C L +V+L+ FD IQ D + N
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCY-LGNVALARHTFDHIQNRDVYAWNL 122
Query: 127 IMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKC 186
++ + + + + M++ + ++ TFP + K C R++ +G K+H +K
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKF 179
Query: 187 GFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELF 246
GF D++V SLIH+YS V +AR +F++ PV D+ +WN+MI GY ++ A L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 247 DFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVS----WNCMIDGYAKIGNVT 302
+ + D T S++S + GD + + S N +ID YA+ G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+ FDRM +R+++SWN ++ Y + + LF M +P+ +L+S+ + +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 363 NMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWN 421
+G I + + + ++K D+ + +++ MYAK G++D AR VF+ + +V+SWN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 422 SMIMGYGMHGQGEKALEMFMEMEKRGP-TPNDATFICVLSACTHAGMVLEGWWYFDLMQR 480
++I GY +G +A+EM+ ME+ G N T++ VL AC+ AG + +G L R
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG---MKLHGR 476
Query: 481 IYKIEPKVEHY--GCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSEL 538
+ K ++ + + D+ G+ G + D+ L ++P W L++ H + E
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEK 535
Query: 539 GKIVAQHLME--LEPRDPGPYVLLSNIYAS----EGKW 570
++ + +++ ++P LLS S EG+W
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
>sp|Q9ZVG8|PPR60_ARATH Pentatricopeptide repeat-containing protein At1g26900,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E54 PE=2
SV=1
Length = 572
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 294/526 (55%), Gaps = 22/526 (4%)
Query: 58 HPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQ 117
++ L SC E +IH ++ +GL +D FA S++L +S+ + + F+ +
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA--FSSVLDIRYASSIFEHVS 86
Query: 118 EPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGK 177
+ FM NT+++ + + ++P A S + ++ AK + + ++F K C+ + G+
Sbjct: 87 NTNLFMFNTMIRGYSISDEPERAFSVF-NQLRAKGLTLDRFSFITTLKSCSRELCVSIGE 145
Query: 178 KVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP-VWDLVTWNSMIDGYVKN 236
+H ++ GF + +RN+LIH Y VCG++ DARKVF++ P D VT++++++GY++
Sbjct: 146 GLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQV 205
Query: 237 REVGFARELFDFMPERDIF----TWNSMISGYVDVGDMEAANGL--------FDLMPFRD 284
+ A +LF M + ++ T S +S D+GD+ A DL D
Sbjct: 206 SKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL----D 261
Query: 285 VVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIR 344
+ +I Y K G ++SAR FD ++VV+WN ++ Y + EC+ L +M
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 345 GDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDL 404
KPN ++ + +L++CA +G+ + +++ RI D +L T+L+ MYAK G+++
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 405 ARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG--PTPNDATFICVLSAC 462
A +F+ M +K+V SW +MI GYG HG +A+ +F +ME+ PN+ TF+ VL+AC
Sbjct: 382 AVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 463 THAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPAL 522
+H G+V+EG F M Y PKVEHYGC+VDLLGRAG + ++ EL+ LP+ +
Sbjct: 442 SHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTA 501
Query: 523 WGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEG 568
W ALL+AC + N++LG+ V L E+ P +LL+ +A G
Sbjct: 502 WRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 298/546 (54%), Gaps = 25/546 (4%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
Q+H L G +SF + L + L ++ S + D NT++ S
Sbjct: 223 QVHAYGLRKG-ELNSFIIN-TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLF 193
AL Y +M+ + VE + +T + C+ + LR GK++HA +K G + + F
Sbjct: 281 EQLLEALE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 194 VRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD 253
V ++L+ MY C +VL R+VF+ + WN+MI GY +N A LF M E
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 254 IFTWNSM-ISGYVDV-------GDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTSA 304
NS ++G V EA +G RD N ++D Y+++G + A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 305 RNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM-----------IRGDAKPNEAS 353
F +M R++V+WN ++ YV + + + L L +M R KPN +
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 354 LMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT 413
LM++L +CA + + G+ IH+Y K + DV + ++L+ MYAKCG + ++R VFD +
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 414 EKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWW 473
+KNV++WN +IM YGMHG G++A+++ M +G PN+ TFI V +AC+H+GMV EG
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 474 YFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPA-LWGALLSACST 532
F +M+ Y +EP +HY C+VDLLGRAG ++++ +L++ +P + A W +LL A
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 533 HSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
H+N E+G+I AQ+L++LEP YVLL+NIY+S G WD+ +RR MKE+ + K G S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 593 LVHPGE 598
+ G+
Sbjct: 760 WIEHGD 765
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 172/339 (50%), Gaps = 21/339 (6%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELD-LFVRNSLIHMYS 203
Y M+ ++ ++Y FP L K A ++ + GK++HA + K G+ +D + V N+L+++Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNS 259
CG+ KVF+ + V+WNS+I + A E F M + ++ FT S
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 260 MISGYVDV--------GDMEAANGLF--DLMPFRDVVSWNCMIDGYAKIGNVTSARNCFD 309
+++ ++ G A GL +L F N ++ Y K+G + S++
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF----IINTLVAMYGKLGKLASSKVLLG 260
Query: 310 RMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDI 369
R++V+WN +L+ + + E L M+ +P+E ++ SVL AC+++ ++
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 370 GQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYG 428
G+ +H+Y ++ + + + ++L+ MY C + R VFD M ++ + WN+MI GY
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 429 MHGQGEKALEMFMEMEKR-GPTPNDATFICVLSACTHAG 466
+ ++AL +F+ ME+ G N T V+ AC +G
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 210/491 (42%), Gaps = 36/491 (7%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
QIH + G DS + L L FD I E + N+++ S
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 135 NDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI---RSLREGKKVHARIVKCGFELD 191
AL + M+ + VE + +T + C+ + L GK+VHA ++ G EL+
Sbjct: 178 EKWEMALE-AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELN 235
Query: 192 LFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNRE----VGFARELFD 247
F+ N+L+ MY G++ ++ + DLVTWN+++ +N + + + RE+
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 248 FMPERDIFTWNS---------MISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKI 298
E D FT +S M+ ++ NG D F + ++D Y
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG----SALVDMYCNC 351
Query: 299 GNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDA-KPNEASLMSV 357
V S R FD M R + WN ++A Y + + E L LF M N ++ V
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 358 LTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNV 417
+ AC G + IH ++ K + D + +L+ MY++ G +D+A +F M ++++
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 418 VSWNSMIMGYGMHGQGEKALEMFMEMEK------RGPT-----PNDATFICVLSACTHAG 466
V+WN+MI GY E AL + +M+ +G + PN T + +L +C
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 467 MVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGAL 526
+ +G + + V +VD+ + G ++ S ++ ++P + W +
Sbjct: 532 ALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589
Query: 527 LSACSTHSNSE 537
+ A H N +
Sbjct: 590 IMAYGMHGNGQ 600
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 11/228 (4%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLM-----PFRDVVSWNCMIDGYAKIGNVTSARNC 307
D + + +++ D+ DME + + V N +++ Y K G+ +
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 308 FDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVI 367
FDR+ RN VSWN L++ + + L F M+ + +P+ +L+SV+TAC+N+ +
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 368 D---IGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ +G+ +H+Y ++K + ++ +L+ MY K G + ++ + + +++V+WN++
Sbjct: 216 EGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
+ + Q +ALE EM G P++ T VL AC+H M+ G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
W LL VR E + + MI KP+ + ++L A A++ +++G+ IH+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 379 KCRIKPD-VLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKAL 437
K D V ++ +L+ +Y KCG VFD ++E+N VSWNS+I + E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 438 EMFMEMEKRGPTPNDATFICVLSACTHAGM 467
E F M P+ T + V++AC++ M
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 306/584 (52%), Gaps = 80/584 (13%)
Query: 63 KLESCSTVKEFHQ--IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
+++S S K+ H I TQ L S ++ ++ + T+L + ++L F ++ P
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSL-------SHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH-------NHYTFPLLGKVCAGIRSL 173
++++ F + + K +A FVE +H FP + K C + L
Sbjct: 70 VLAWKSVIRCFTDQS--------LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 174 REGKKVHARIVKCGFELDLFVRNSLIHMYS---------VCGEVLD-------------- 210
R G+ VH IV+ G + DL+ N+L++MY+ G V D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 211 -------------ARKVFEDGPVWDLVTWNSMIDGYVKN----------REVGFARELFD 247
R+VFE P D+V++N++I GY ++ RE+G D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT----D 237
Query: 248 FMPERDIFTWNSMI---SGYVDVGDMEAANGLFDLMPF-RDVVSWNCMIDGYAKIGNVTS 303
P D FT +S++ S YVDV + +G DV + ++D YAK +
Sbjct: 238 LKP--DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 295
Query: 304 ARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACAN 363
+ F R+ R+ +SWN L+A YV+ Y E LRLF +M+ KP + SV+ ACA+
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
Query: 364 MGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSM 423
+ + +G+ +H Y+ + ++ ++++L+ MY+KCG + AR +FD M + VSW ++
Sbjct: 356 LATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAI 415
Query: 424 IMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK 483
IMG+ +HG G +A+ +F EM+++G PN F+ VL+AC+H G+V E W YF+ M ++Y
Sbjct: 416 IMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYG 475
Query: 484 IEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVA 543
+ ++EHY + DLLGRAG + ++ +SK+ +E ++W LLS+CS H N EL + VA
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVA 535
Query: 544 QHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEK 587
+ + ++ + G YVL+ N+YAS G+W E+ LR M++K L K
Sbjct: 536 EKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
>sp|P0C8Q5|PP336_ARATH Pentatricopeptide repeat-containing protein At4g22760
OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1
Length = 578
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 305/568 (53%), Gaps = 41/568 (7%)
Query: 64 LESCSTVKEFHQIHTQLLVSGLSQ-DSFAASRVL---KKLCTSLSSVSLSVLFFDGIQEP 119
L+ C +++ Q+H QL+V+ + + + L K+ ++ + +L G
Sbjct: 10 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRIL--KGFNGH 67
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
D+F +++ FL + F Y M + + + + + C + ++ +GK +
Sbjct: 68 DSFSWGCLVR-FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
HA+ +K G ++V+ L+ +YS G + A+K F+D + V+WNS++ GY+++ E+
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 240 GFARELFDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIG 299
AR +FD +PE+D +WN +IS Y GDM A LF MP + SWN +I GY
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCR 246
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDY-----------------------C--- 333
+ AR FD M +N VSW +++ Y + D C
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Query: 334 -----ECLRLFDRMIRGDA--KPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDV 386
+ L+LF +M+ ++ +P+E +L SV++A + +G G W+ SYI + IK D
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD 366
Query: 387 LLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKR 446
LLSTSL+ +Y K G A +F N+ +K+ VS+++MIMG G++G +A +F M ++
Sbjct: 367 LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEK 426
Query: 447 GPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRD 506
PN TF +LSA +H+G+V EG+ F+ M+ + +EP +HYG MVD+LGRAG + +
Sbjct: 427 KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEE 485
Query: 507 SEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYAS 566
+ EL+ +PM+ +WGALL A H+N E G+I H ++LE G L+ IY+S
Sbjct: 486 AYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSS 545
Query: 567 EGKWDEVENLRRIMKEKELEKAVGSSLV 594
G+WD+ +R +KEK+L K +G S V
Sbjct: 546 VGRWDDARTVRDSIKEKKLCKTLGCSWV 573
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 261/447 (58%), Gaps = 17/447 (3%)
Query: 160 FPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGP 219
+ L K C + L +G+ VHA I++ F D+ + N+L++MY+ CG + +ARKVFE P
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 220 VWDLVTWNSMIDGYVKNRE----VGFARELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
D VTW ++I GY ++ + F ++ F + FT +S+I +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 276 L--------FDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYV 327
L FD +V + ++D Y + G + A+ FD + RN VSWN L+A +
Sbjct: 183 LHGFCVKCGFD----SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 328 RCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVL 387
R + L LF M+R +P+ S S+ AC++ G ++ G+W+H+Y+ K K
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 388 LSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRG 447
+LL MYAK G + AR +FD + +++VVSWNS++ Y HG G++A+ F EM + G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 448 PTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDS 507
PN+ +F+ VL+AC+H+G++ EGW Y++LM++ I P+ HY +VDLLGRAG + +
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 508 EELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASE 567
+ ++P+E A+W ALL+AC H N+ELG A+H+ EL+P DPGP+V+L NIYAS
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 568 GKWDEVENLRRIMKEKELEKAVGSSLV 594
G+W++ +R+ MKE ++K S V
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 189/405 (46%), Gaps = 21/405 (5%)
Query: 64 LESCSTVKEFHQ---IHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPD 120
L+ C+ K Q +H +L S D + +L + S+ + F+ + + D
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN-MYAKCGSLEEARKVFEKMPQRD 125
Query: 121 AFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVH 180
T++ + + P AL F+ +M+ N +T + K A R G ++H
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFF-NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 181 ARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVG 240
VKCGF+ ++ V ++L+ +Y+ G + DA+ VF+ + V+WN++I G+ +
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 241 FARELFD------FMPERDIFTWNSMISGYVDVGDMEAANGLFDLM--PFRDVVSW--NC 290
A ELF F P F++ S+ G +E + M +V++ N
Sbjct: 245 KALELFQGMLRDGFRPSH--FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 291 MIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPN 350
++D YAK G++ AR FDR+ R+VVSWN LL Y + E + F+ M R +PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 351 EASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
E S +SVLTAC++ G++D G + ++K I P+ +++ + + G ++ A +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 411 NM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPN 451
M E W +++ MH G A E E++ P P+
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 305 bits (781), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 287/531 (54%), Gaps = 16/531 (3%)
Query: 113 FDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRS 172
FD + E + ++ + + P A+ F+ + +++ F E + +T + CA + +
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF-ESDKFTLSSVFSACAELEN 284
Query: 173 LREGKKVHARIVKCGFELDLFVRNSLIHMYSVC---GEVLDARKVFEDGPVWDLVTWNSM 229
L GK++H+ ++ G D V SL+ MY+ C G V D RKVF+ +++W ++
Sbjct: 285 LSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 230 IDGYVKNREVGF-ARELFDFM-----PERDIFTWNSMISGYVDVGDMEAANGLFDLMPFR 283
I GY+KN + A LF M E + FT++S ++ D + R
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 284 DVVS----WNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLF 339
+ S N +I + K + A+ F+ + +N+VS+N L R ++ + +L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 340 DRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKC 399
+ + + + S+L+ AN+G I G+ IHS + K + + + +L++MY+KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 400 GVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVL 459
G +D A VF+ M +NV+SW SMI G+ HG + LE F +M + G PN+ T++ +L
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Query: 460 SACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAG 519
SAC+H G+V EGW +F+ M +KI+PK+EHY CMVDLL RAGL+ D+ E ++ +P +A
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
+W L AC HSN+ELGK+ A+ ++EL+P +P Y+ LSNIYA GKW+E +RR
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 580 MKEKELEKAVGSSLVHPGEFASESIVENCPPHRKCIVYSMLGEIGAQMKMC 630
MKE+ L K G S + G+ + V + +Y L + ++K C
Sbjct: 703 MKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRC 753
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 162/323 (50%), Gaps = 22/323 (6%)
Query: 159 TFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDG 218
TF L K C R R GK VHAR+++ E D + NSLI +YS G+ A VFE
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 219 PVW---DLVTWNSMIDGYVKN-REVGFARELFDFMPERDI---FTWNSMI-----SGYVD 266
+ D+V+W++M+ Y N RE+ + +F+ + + + ++I S +V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 267 VGDMEAANGLFDLMPFRDVVSWNC-MIDGYAKIGN-VTSARNCFDRMCMRNVVSWNILLA 324
VG + L F V C +ID + K N +A FD+M NVV+W +++
Sbjct: 184 VGRV-TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 325 LYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKP 384
++ E +R F M+ + ++ +L SV +ACA + + +G+ +HS+ + +
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 385 DVLLSTSLLTMYAKC---GVMDLARNVFDNMTEKNVVSWNSMIMGYGMH-GQGEKALEMF 440
DV SL+ MYAKC G +D R VFD M + +V+SW ++I GY + +A+ +F
Sbjct: 303 DV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 441 MEMEKRGPT-PNDATFICVLSAC 462
EM +G PN TF AC
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKAC 383
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 116/236 (49%), Gaps = 17/236 (7%)
Query: 300 NVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKP-NEASLMSVL 358
+V++ N DR+ +R++ + ++ A+ D M R +P + + S+L
Sbjct: 21 SVSNRINVADRLILRHLNAGDLRGAVSA-----------LDLMARDGIRPMDSVTFSSLL 69
Query: 359 TACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMT---EK 415
+C +G+ +H+ + + I+PD +L SL+++Y+K G A +VF+ M ++
Sbjct: 70 KSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKR 129
Query: 416 NVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYF 475
+VVSW++M+ YG +G+ A+++F+E + G PND + V+ AC+++ V G
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 476 DLMQRIYKIEPKVEHYGC-MVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
+ + E V GC ++D+ + ++ V E W +++ C
Sbjct: 190 GFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 305 bits (781), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 199/673 (29%), Positives = 321/673 (47%), Gaps = 123/673 (18%)
Query: 48 NQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSG-LSQDSFAASRVLKKLCTSLSSV 106
N L V +L + ++ + +H ++ G +S + V LC +
Sbjct: 9 NNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALC---GHI 65
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVE--HNHYTFPLLG 164
+ + F+ + + N +++ ++ A+S + +M+++ V+ + YT+P +
Sbjct: 66 TYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFI-RMVSEGVKCVPDGYTYPFVA 124
Query: 165 KVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLV 224
K ++S++ G VH RI++ F D +V+N+L+ MY G+V AR VF+ D++
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 225 TWNSMIDGYVKNREVGFARELFDFMPERD------------------------------- 253
+WN+MI GY +N + A +FD+M
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 254 --------IFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSA- 304
I N++++ Y+ G M+ A +FD M RDV++W CMI+GY + G+V +A
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 305 ---------------------------------RNCFDRMCMRNVVSWNI-----LLALY 326
C +R V +I L+++Y
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 327 VRCK--DYC-----------------------------ECLRLFDRMIRGDAKPNEASLM 355
+CK D C + L LF RM R D +PN A+L
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 356 SVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTE- 414
S+L A A + + IH Y+ K + +T L+ +Y+KCG ++ A +F+ + E
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 415 ---KNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEG 471
K+VV W ++I GYGMHG G AL++FMEM + G TPN+ TF L+AC+H+G+V EG
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 472 WWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACS 531
F M YK + HY C+VDLLGRAG + ++ L++ +P E +WGALL+AC
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACV 604
Query: 532 THSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGS 591
TH N +LG++ A L ELEP + G YVLL+NIYA+ G+W ++E +R +M+ L K G
Sbjct: 605 THENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGH 664
Query: 592 SLVHPGEFASESI 604
S + E S S+
Sbjct: 665 STI---EIRSNSV 674
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 289/556 (51%), Gaps = 65/556 (11%)
Query: 67 CSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNT 126
CST++E QIH L+ +GL D+ ASRVL C S S ++ + L F I + F+ NT
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 127 IMKSFLMLNDPFGALSFYYEKMMAK-FVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVK 185
I++ F + P A+S + + + + V+ T+P
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP------------------------ 130
Query: 186 CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFAREL 245
S+ Y G+ D R+ + G V +
Sbjct: 131 -----------SVFKAYGRLGQARDGRQ----------------LHGMVIKEGL------ 157
Query: 246 FDFMPERDIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSAR 305
E D F N+M+ YV G + A +F M DVV+WN MI G+AK G + A+
Sbjct: 158 -----EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 306 NCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMG 365
N FD M RN VSWN +++ +VR + + L +F M D KP+ +++S+L ACA +G
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 366 VIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIM 425
+ G+WIH YI + R + + ++ T+L+ MY KCG ++ NVF+ +K + WNSMI+
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 426 GYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIE 485
G +G E+A+++F E+E+ G P+ +FI VL+AC H+G V +F LM+ Y IE
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 486 PKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQH 545
P ++HY MV++LG AGL+ ++E L+ +P+E +W +LLSAC N E+ K A+
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 546 LMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
L +L+P + YVLLSN YAS G ++E R +MKE+++EK VG S + +F +
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV-DFEVHEFI 511
Query: 606 ENCPPHRKCI-VYSML 620
H K +YS+L
Sbjct: 512 SCGGTHPKSAEIYSLL 527
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 316/615 (51%), Gaps = 67/615 (10%)
Query: 33 KLWANEPKPKFTDTDNQRLPI--VDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSF 90
+L+ E K T D P+ + L+H L LE+C++ +F Q+ Q++ L D+F
Sbjct: 12 RLFGTECGSKTTKWD----PVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTF 67
Query: 91 AASR-VLKKLCTSLSSVSLS-VLFFDGIQEPDAFMCNTIMKSFLM-LNDPFGALSFYYEK 147
SR + T ++ L+ +LF + P+ F+ NT++ + N+ FG Y
Sbjct: 68 PMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG----LYSS 123
Query: 148 MMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCG-FELDLFVRNSLIHMYSVCG 206
M+ V + TF L K + L E K++H I+ G L ++ NSL+ Y G
Sbjct: 124 MIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELG 180
Query: 207 EVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARE---------------------- 244
A KVF P D+ ++N MI GY K GF+ E
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQ---GFSLEALKLYFKMVSDGIEPDEYTVLS 237
Query: 245 -------LFDFMPERDIFTW---------------NSMISGYVDVGDMEAANGLFDLMPF 282
L D + + W N+++ Y + A FD M
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 283 RDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVR--CKDYCECLRLFD 340
+D+ SWN M+ G+ ++G++ +A+ FD+M R++VSWN LL Y + C ++
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 341 RMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCG 400
I KP+ +++S+++ AN G + G+W+H + + ++K D LS++L+ MY KCG
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 401 VMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLS 460
+++ A VF TEK+V W SMI G HG G++AL++F M++ G TPN+ T + VL+
Sbjct: 418 IIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Query: 461 ACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVS-KLPMEAG 519
AC+H+G+V EG F+ M+ + +P+ EHYG +VDLL RAG + +++++V K+PM
Sbjct: 478 ACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPS 537
Query: 520 PALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRI 579
++WG++LSAC + E ++ L++LEP G YVLLSNIYA+ G+W + R
Sbjct: 538 QSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREA 597
Query: 580 MKEKELEKAVGSSLV 594
M+ + ++K G S V
Sbjct: 598 MENRGVKKTAGYSSV 612
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 260/468 (55%), Gaps = 19/468 (4%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
Y M+ + ++FP + K CA + G+++H + K G E + FV +LI MY
Sbjct: 41 YRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCK 100
Query: 205 CGEVLDARKVFEDGPVWDL--VTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMIS 262
CG V DARKVFE+ P V +N++I GY N +V A +F M E + + +
Sbjct: 101 CGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTML 160
Query: 263 GYVDVGDM------------EAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDR 310
G V + + + G D +V N I Y K G+V + R FD
Sbjct: 161 GLVPLCTVPEYLWLGRSLHGQCVKGGLD----SEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 311 MCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
M ++ +++WN +++ Y + + L L+++M P+ +L+SVL++CA++G IG
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 371 QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMH 430
+ ++ P+V +S + ++MYA+CG + AR VFD M K++VSW +MI YGMH
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 431 GQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
G GE L +F +M KRG P+ A F+ VLSAC+H+G+ +G F M+R YK+EP EH
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
Y C+VDLLGRAG + ++ E + +P+E A+WGALL AC H N ++ ++ ++E E
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE 456
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV-HPG 597
P + G YVL+SNIY+ + + +R +M+E+ K G S V H G
Sbjct: 457 PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 199/456 (43%), Gaps = 33/456 (7%)
Query: 60 ILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEP 119
IL+ S S Q+H + G + F + ++ C +F + Q
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSS 118
Query: 120 DAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKV 179
+C + S N ++ + +M V + T L +C L G+ +
Sbjct: 119 QLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSL 178
Query: 180 HARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREV 239
H + VK G + ++ V NS I MY CG V R++F++ PV L+TWN++I GY +N
Sbjct: 179 HGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLA 238
Query: 240 GFARELFDFMPER----DIFTWNSMISGYV---------DVGDMEAANGLFDLMPFRDVV 286
EL++ M D FT S++S +VG + +NG +V
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP-----NVF 293
Query: 287 SWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD 346
N I YA+ GN+ AR FD M ++++VSW ++ Y L LFD MI+
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Query: 347 AKPNEASLMSVLTACANMGVIDIG-QWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLA 405
+P+ A + VL+AC++ G+ D G + + ++ +++P + L+ + + G +D A
Sbjct: 354 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 413
Query: 406 RNVFDNM-TEKNVVSWNSMIMGYGMHGQ---GEKALEMFMEMEKRGPTPNDATFICVLSA 461
++M E + W +++ +H E A +E E PN+ + ++S
Sbjct: 414 MEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE-----PNNIGYYVLMSN 468
Query: 462 CTHAGMVLEGWWYFDLM--QRIYKIEPK---VEHYG 492
EG W +M +R ++ +P VEH G
Sbjct: 469 IYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 17/251 (6%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
WN+ L + E + L+ M+R + P+ S +L +CA++ + GQ +H ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 379 K--CRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVS--WNSMIMGYGMHGQGE 434
K C +P VL T+L++MY KCG++ AR VF+ + + +S +N++I GY + +
Sbjct: 81 KGGCETEPFVL--TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYK--IEPKVEHYG 492
A MF M++ G + + T + ++ CT + W L + K ++ +V
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL---WLGRSLHGQCVKGGLDSEVAVLN 195
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR 552
+ + + G + L ++P++ G W A++S +S + L V + +++
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISG---YSQNGLAYDVLELYEQMKSS 251
Query: 553 D--PGPYVLLS 561
P P+ L+S
Sbjct: 252 GVCPDPFTLVS 262
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 288/561 (51%), Gaps = 39/561 (6%)
Query: 37 NEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVL 96
+ P + D Q P D SH + + +C +H Q+L G+ AA V
Sbjct: 12 SSPAKIYFPADRQASP--DESH-FISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVS 68
Query: 97 KKLCTSL-SSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEH 155
C+SL S S+ F +E + F+ N +++ L N F + ++ M+ V+
Sbjct: 69 ---CSSLLKSPDYSLSIFRNSEERNPFVLNALIRG-LTENARFESSVRHFILMLRLGVKP 124
Query: 156 NHYTFPLLGKVCA--GIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARK 213
+ TFP + K + G R L G+ +HA +K + D FVR SL+ MY+ G++ A +
Sbjct: 125 DRLTFPFVLKSNSKLGFRWL--GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQ 182
Query: 214 VFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISGYVDVGDMEAA 273
VFE+ P D + + I WN +I+GY DM A
Sbjct: 183 VFEESP---------------------------DRIKKESILIWNVLINGYCRAKDMHMA 215
Query: 274 NGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYC 333
LF MP R+ SW+ +I GY G + A+ F+ M +NVVSW L+ + + DY
Sbjct: 216 TTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYE 275
Query: 334 ECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLL 393
+ + M+ KPNE ++ +VL+AC+ G + G IH YI IK D + T+L+
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALV 335
Query: 394 TMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDA 453
MYAKCG +D A VF NM K+++SW +MI G+ +HG+ +A++ F +M G P++
Sbjct: 336 DMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEV 395
Query: 454 TFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSK 513
F+ VL+AC ++ V G +FD M+ Y IEP ++HY +VDLLGRAG + ++ ELV
Sbjct: 396 VFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVEN 455
Query: 514 LPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEV 573
+P+ W AL AC H + V+Q+L+EL+P G Y+ L +AS+G +V
Sbjct: 456 MPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDV 515
Query: 574 ENLRRIMKEKELEKAVGSSLV 594
E R ++++ E+++G S +
Sbjct: 516 EKRRLSLQKRIKERSLGWSYI 536
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 302 bits (773), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 255/457 (55%), Gaps = 9/457 (1%)
Query: 145 YEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSV 204
+ +M V N YT+ L C + +L +GK H +VK G EL + SL+ MY
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 205 CGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDI----FTWNSM 260
CG++ +AR+VF + DLV W +MI GY N V A LF M +I T S+
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 261 ISGYVDVGDME---AANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMRNVV 317
+SG + ++E + +GL + D N ++ YAK A+ F+ +++V
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIV 409
Query: 318 SWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYI 377
+WN +++ + + E L LF RM PN ++ S+ +ACA++G + +G +H+Y
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 378 QKCRI--KPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEK 435
K V + T+LL YAKCG AR +FD + EKN ++W++MI GYG G
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIG 529
Query: 436 ALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMV 495
+LE+F EM K+ PN++TF +LSAC H GMV EG YF M + Y P +HY CMV
Sbjct: 530 SLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMV 589
Query: 496 DLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPRDPG 555
D+L RAG + + +++ K+P++ +GA L C HS +LG+IV + +++L P D
Sbjct: 590 DMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDAS 649
Query: 556 PYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSS 592
YVL+SN+YAS+G+W++ + +R +MK++ L K G S
Sbjct: 650 YYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 221/482 (45%), Gaps = 14/482 (2%)
Query: 57 SHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGI 116
S P L C+ + Q H L +GL D A++++ L + L FD I
Sbjct: 44 SSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVS-LYGFFGYTKDARLVFDQI 102
Query: 117 QEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREG 176
EPD ++ +++ + + + + Y + +M ++ F K C ++ L G
Sbjct: 103 PEPDFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 177 KKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKN 236
KK+H ++VK D V L+ MY+ CGE+ A KVF D + ++V W SMI GYVKN
Sbjct: 162 KKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 237 REVGFARELFDFMPERDI----FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMI 292
LF+ M E ++ +T+ ++I + + + + +C++
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 293 ----DGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAK 348
D Y K G++++AR F+ ++V W ++ Y E L LF +M + K
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 349 PNEASLMSVLTACANMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNV 408
PN ++ SVL+ C + +++G+ +H K I D ++ +L+ MYAKC A+ V
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYV 399
Query: 409 FDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMV 468
F+ +EK++V+WNS+I G+ +G +AL +F M TPN T + SAC G +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 469 LEGWWYFDLMQRIYKIEPKVEHYG-CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALL 527
G ++ + H G ++D + G + S L+ E W A++
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ-SARLIFDTIEEKNTITWSAMI 518
Query: 528 SA 529
Sbjct: 519 GG 520
Score = 36.2 bits (82), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 15/171 (8%)
Query: 111 LFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGI 170
L FD I+E + + ++ + D G+L +E+M+ K + N TF + C
Sbjct: 501 LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLEL-FEEMLKKQQKPNESTFTSILSACGHT 559
Query: 171 RSLREGKKVHARIVK-CGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVW-DLVTWNS 228
+ EGKK + + K F ++ M + GE+ A + E P+ D+ + +
Sbjct: 560 GMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGA 619
Query: 229 MIDGYVKNREVGFA----RELFDFMPERDIFTWNSMISGYVDVGDMEAANG 275
+ G + +++ D P+ S YV V ++ A++G
Sbjct: 620 FLHGCGMHSRFDLGEIVIKKMLDLHPDD--------ASYYVLVSNLYASDG 662
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 312/631 (49%), Gaps = 65/631 (10%)
Query: 47 DNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSV 106
DN P V + S+V+ H LV+G + F + L + + S+
Sbjct: 126 DNYTFPFV------FKACGEISSVRCGESAHALSLVTGFISNVFVGN-ALVAMYSRCRSL 178
Query: 107 SLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKF-VEHNHYTFPLLGK 165
S + FD + D N+I++S+ L P AL + +M +F ++ T +
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF-SRMTNEFGCRPDNITLVNVLP 237
Query: 166 VCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVT 225
CA + + GK++H V ++FV N L+ MY+ CG + +A VF + V D+V+
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 226 WNSMIDGYVKNREVGFARELFDFMPER----DIFTWNSMISGYVDVGDMEAANGLFD--- 278
WN+M+ GY + A LF+ M E D+ TW++ ISGY G A G+
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 279 -----------------------LMPFRDVVSW--------------------NCMIDGY 295
LM +++ + N +ID Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 296 AKIGNVTSARNCFDRMC--MRNVVSWNILLALYVRCKDYCECLRLFDRMIRGD--AKPNE 351
AK V +AR FD + R+VV+W +++ Y + D + L L M D +PN
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 352 ASLMSVLTACANMGVIDIGQWIHSY-IQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFD 410
++ L ACA++ + IG+ IH+Y ++ + + +S L+ MYAKCG + AR VFD
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 411 NMTEKNVVSWNSMIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLE 470
NM KN V+W S++ GYGMHG GE+AL +F EM + G + T + VL AC+H+GM+ +
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 471 GWWYFDLMQRIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSAC 530
G YF+ M+ ++ + P EHY C+VDLLGRAG + + L+ ++PME P +W A LS C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 531 STHSNSELGKIVAQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVG 590
H ELG+ A+ + EL G Y LLSN+YA+ G+W +V +R +M+ K ++K G
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 591 SSLVHPGEFASESIV-ENCPPHRKCIVYSML 620
S V + + V + PH K I +L
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 748
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/538 (28%), Positives = 251/538 (46%), Gaps = 60/538 (11%)
Query: 55 DLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFD 114
+++ P + K C T+ + IH +LL G+ + + + + S ++S+L
Sbjct: 29 EITPPFIHK---CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRF 85
Query: 115 GIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLR 174
+ + N++++S+ N + + M + ++YTFP + K C I S+R
Sbjct: 86 PPSDAGVYHWNSLIRSY-GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 175 EGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV 234
G+ HA + GF ++FV N+L+ MYS C + DARKVF++ VWD+V+WNS+I+ Y
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 235 KNREVGFARELFDFMPE----------------------------------------RDI 254
K + A E+F M +++
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRM--- 311
F N ++ Y G M+ AN +F M +DVVSWN M+ GY++IG A F++M
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 312 -CMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIG 370
+VV+W+ ++ Y + E L + +M+ KPNE +L+SVL+ CA++G + G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 371 QWIHSYIQKCRIK-------PDVLLSTSLLTMYAKCGVMDLARNVFDNMT--EKNVVSWN 421
+ IH Y K I + ++ L+ MYAKC +D AR +FD+++ E++VV+W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 422 SMIMGYGMHGQGEKALEMFMEM--EKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQ 479
MI GY HG KALE+ EM E PN T C L AC + G
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 480 RIYKIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSE 537
R + + C++D+ + G + D+ LV M W +L++ H E
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 281/534 (52%), Gaps = 47/534 (8%)
Query: 116 IQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMMAKFVEHNHYTFPLLGKVCAGIRSLRE 175
+Q P M N ++KS L F + + ++ + + +++T P++ K +R + E
Sbjct: 6 LQTPSLLMYNKMLKS-LADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 176 GKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYV- 234
G+KVH VK G E D +V NSL+ MY+ G++ KVF++ P D+V+WN +I YV
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 235 -------------------------------------KNREVGFARELFDFMP---ERDI 254
KN E+G ++ F+ E +
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIG--ERIYRFVVTEFEMSV 182
Query: 255 FTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMCMR 314
N+++ + G ++ A +FD M ++V W M+ GY G + AR F+R ++
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 315 NVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIH 374
+VV W ++ YV+ + E L LF M +P+ L+S+LT CA G ++ G+WIH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 375 SYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGE 434
YI + R+ D ++ T+L+ MYAKCG ++ A VF + E++ SW S+I G M+G
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 435 KALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCM 494
+AL+++ EME G + TF+ VL+AC H G V EG F M + ++PK EH C+
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 495 VDLLGRAGLMRDSEELVSKLPMEAGPAL---WGALLSACSTHSNSELGKIVAQHLMELEP 551
+DLL RAGL+ ++EEL+ K+ E+ L + +LLSA + N ++ + VA+ L ++E
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIV 605
D + LL+++YAS +W++V N+RR MK+ + K G S + E IV
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIV 536
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 28/298 (9%)
Query: 319 WNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQ 378
+N +L K + + L LF + P+ +L VL + + + G+ +H Y
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 379 KCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALE 438
K ++ D +S SL+ MYA G +++ VFD M +++VVSWN +I Y +G+ E A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 439 MFMEMEKRGPTPND-ATFICVLSACTHAGMVLEGWWYFDLMQRIYK-----IEPKVEHYG 492
+F M + D T + LSAC+ ++ +RIY+ E V
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACS-------ALKNLEIGERIYRFVVTEFEMSVRIGN 186
Query: 493 CMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEP- 551
+VD+ + G + + + + + + ST E A+ L E P
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDE-----ARVLFERSPV 241
Query: 552 RDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCP 609
+D + + N Y ++DE L R M+ ++ + P F S++ C
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCMQ---------TAGIRPDNFVLVSLLTGCA 290
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 292/532 (54%), Gaps = 18/532 (3%)
Query: 75 QIHTQLLVSGLSQDSFAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLML 134
+IH L+ SG S D FA + L+ + V+ + FD + E D NTI+ +
Sbjct: 156 EIHGLLVKSGFSLDLFAMTG-LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 135 NDPFGALSFYYEKMMAKFVEHN-HYTFPLLGKVCAGIRSLR---EGKKVHARIVKCGFEL 190
AL +M+ E N +F + V + +LR GK++H ++ GF+
Sbjct: 215 GMARMAL-----EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 191 DLFVRNSLIHMYSVCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMP 250
+ + +L+ MY+ CG + AR++F+ ++V+WNSMID YV+N A +F M
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 251 ERDIFTWNSMISGYV----DVGDMEAANGL----FDLMPFRDVVSWNCMIDGYAKIGNVT 302
+ + + + G + D+GD+E + +L R+V N +I Y K V
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 303 SARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACA 362
+A + F ++ R +VSWN ++ + + + L F +M KP+ + +SV+TA A
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 363 NMGVIDIGQWIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNS 422
+ + +WIH + + + +V ++T+L+ MYAKCG + +AR +FD M+E++V +WN+
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 423 MIMGYGMHGQGEKALEMFMEMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIY 482
MI GYG HG G+ ALE+F EM+K PN TF+ V+SAC+H+G+V G F +M+ Y
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 483 KIEPKVEHYGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIV 542
IE ++HYG MVDLLGRAG + ++ + + ++P++ ++GA+L AC H N +
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKA 629
Query: 543 AQHLMELEPRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLV 594
A+ L EL P D G +VLL+NIY + W++V +R M + L K G S+V
Sbjct: 630 AERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 271/546 (49%), Gaps = 17/546 (3%)
Query: 30 TPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKLESCSTVKEFHQIHTQLLVSGLSQDS 89
T P++ + + ++ +P HP LE CS++KE QI + +GL Q+
Sbjct: 10 TVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEH 69
Query: 90 FAASRVLKKLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSFYYEKMM 149
F ++++ C SV + F+ I + +T++K F ++D AL F+ +M
Sbjct: 70 FFQTKLVSLFC-RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFV-RMR 127
Query: 150 AKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYSVCGEVL 209
VE Y F L KVC LR GK++H +VK GF LDLF L +MY+ C +V
Sbjct: 128 YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN 187
Query: 210 DARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERD-------IFTWNSMIS 262
+ARKVF+ P DLV+WN+++ GY +N A E+ M E + I + +S
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 263 GYVDVGDMEAANGLFDLMPFRDVVSWN-CMIDGYAKIGNVTSARNCFDRMCMRNVVSWNI 321
+ + +G F +V+ + ++D YAK G++ +AR FD M RNVVSWN
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 322 LLALYVRCKDYCECLRLFDRMIRGDAKPNEASLMSVLTACANMGVIDIGQWIHSYIQKCR 381
++ YV+ ++ E + +F +M+ KP + S+M L ACA++G ++ G++IH +
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 382 IKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHGQGEKALEMFM 441
+ +V + SL++MY KC +D A ++F + + +VSWN+MI+G+ +G+ AL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 442 EMEKRGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEHYGCMVDLLGRA 501
+M R P+ T++ V++A + W ++ R ++ V +VD+ +
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR-SCLDKNVFVTTALVDMYAKC 486
Query: 502 GLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELEPR--DPGPYVL 559
G + + L+ + E W A++ TH GK + E++ P
Sbjct: 487 GAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGVTF 542
Query: 560 LSNIYA 565
LS I A
Sbjct: 543 LSVISA 548
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 233/378 (61%), Gaps = 2/378 (0%)
Query: 253 DIFTWNSMISGYVDVGDMEAANGLFDLMPFRDVVSWNCMIDGYAKIGNVTSARNCFDRMC 312
D + ++ Y GD+ +A +FD MP R +VS MI YAK GNV +AR FD MC
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 313 MRNVVSWNILLALYVRCKDYCECLRLFDRMI-RGDAKPNEASLMSVLTACANMGVIDIGQ 371
R++VSWN+++ Y + + L LF +++ G KP+E ++++ L+AC+ +G ++ G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 372 WIHSYIQKCRIKPDVLLSTSLLTMYAKCGVMDLARNVFDNMTEKNVVSWNSMIMGYGMHG 431
WIH +++ RI+ +V + T L+ MY+KCG ++ A VF++ K++V+WN+MI GY MHG
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 432 QGEKALEMFMEMEK-RGPTPNDATFICVLSACTHAGMVLEGWWYFDLMQRIYKIEPKVEH 490
+ AL +F EM+ G P D TFI L AC HAG+V EG F+ M + Y I+PK+EH
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 491 YGCMVDLLGRAGLMRDSEELVSKLPMEAGPALWGALLSACSTHSNSELGKIVAQHLMELE 550
YGC+V LLGRAG ++ + E + + M+A LW ++L +C H + LGK +A++L+ L
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLN 459
Query: 551 PRDPGPYVLLSNIYASEGKWDEVENLRRIMKEKELEKAVGSSLVHPGEFASESIVENCPP 610
++ G YVLLSNIYAS G ++ V +R +MKEK + K G S + E +
Sbjct: 460 IKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREH 519
Query: 611 HRKCIVYSMLGEIGAQMK 628
+ +Y+ML +I ++K
Sbjct: 520 SKSKEIYTMLRKISERIK 537
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 197/452 (43%), Gaps = 61/452 (13%)
Query: 30 TPPKLWANEPKPKFTDTDNQRLPIVDLSHPILQKL----ESCSTVKEFHQIHTQLLVSGL 85
+ P L + P+ + + T R + P +KL + +V E QIH +L L
Sbjct: 3 SSPLLATSLPQNQLSTTATARFRL-----PPPEKLAVLIDKSQSVDEVLQIHAAILRHNL 57
Query: 86 SQDSFAASRVLK--KLCTSLSSVSLSVLFFDGIQEPDAFMCNTIMKSFLMLNDPFGALSF 143
LK + S + S+ F +PD F+ + + +N
Sbjct: 58 LLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINT-ASINGLKDQAFL 116
Query: 144 YYEKMMAKFVEHNHYTFPLLGKVCAGIRSLREGKKVHARIVKCGFELDLFVRNSLIHMYS 203
Y ++++ + N +TF L K C S + GK +H ++K G +D +V L+ +Y+
Sbjct: 117 LYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYA 172
Query: 204 VCGEVLDARKVFEDGPVWDLVTWNSMIDGYVKNREVGFARELFDFMPERDIFTWNSMISG 263
G+V+ A+KVF+ P LV+ +MI Y K V AR LFD M ERDI +WN MI G
Sbjct: 173 KGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDG 232
Query: 264 YVDVGDMEAANGLFDLM-----PFRDVVS------------------W------------ 288
Y G A LF + P D ++ W
Sbjct: 233 YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 289 -----NCMIDGYAKIGNVTSARNCFDRMCMRNVVSWNILLALYVRCKDYCECLRLFDRM- 342
+ID Y+K G++ A F+ +++V+WN ++A Y + LRLF+ M
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 343 -IRGDAKPNEASLMSVLTACANMGVIDIGQWI-HSYIQKCRIKPDVLLSTSLLTMYAKCG 400
I G +P + + + L ACA+ G+++ G I S Q+ IKP + L+++ + G
Sbjct: 353 GITG-LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAG 411
Query: 401 VMDLARNVFDNMT-EKNVVSWNSMIMGYGMHG 431
+ A NM + + V W+S++ +HG
Sbjct: 412 QLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 236,763,016
Number of Sequences: 539616
Number of extensions: 9877068
Number of successful extensions: 28127
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 19869
Number of HSP's gapped (non-prelim): 1901
length of query: 641
length of database: 191,569,459
effective HSP length: 124
effective length of query: 517
effective length of database: 124,657,075
effective search space: 64447707775
effective search space used: 64447707775
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)