BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040579
(72 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539022|ref|XP_002510576.1| skp1, putative [Ricinus communis]
gi|223551277|gb|EEF52763.1| skp1, putative [Ricinus communis]
Length = 157
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 54/84 (64%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA + IPLPNVT KI K I+YC KH E S
Sbjct: 9 LKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVETSK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
DD +S+DD+LK WDA+ VKVD
Sbjct: 69 SDDRP-SSVDDELKTWDAEFVKVD 91
>gi|192910786|gb|ACF06501.1| SKP1 [Elaeis guineensis]
Length = 163
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEA-- 46
LKSSDGEVFE HMIEDDCA + IPLPNVT KI K I+YC KH +A
Sbjct: 8 LKSSDGEVFEVEETVAMESQTIKHMIEDDCAGNGIPLPNVTSKILSKVIEYCKKHVDAAA 67
Query: 47 ----SMFDDLATTSIDDDLKAWDADLVKVD 72
S DD ++ +D++LK WDAD VKVD
Sbjct: 68 ASSKSTVDDTSSKIVDEELKTWDADFVKVD 97
>gi|151564277|gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]
Length = 157
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 54/84 (64%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE E HMIEDDCA + IPLPNVT KI K I+YC KH A
Sbjct: 9 LKSSDGETLEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVGAPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D A +S+DD+LKAWDAD VKVD
Sbjct: 69 AEDRA-SSVDDELKAWDADFVKVD 91
>gi|392499473|gb|AFM75900.1| GSK1 [Gossypium hirsutum]
gi|399912953|gb|AFP55363.1| SKP1-like protein [Gossypium hirsutum]
Length = 156
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 53/84 (63%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA + IPLPNVT KI K I+YC KH EA
Sbjct: 10 LKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKKHVEAPK 69
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
DD S DD+LK+WDAD VKVD
Sbjct: 70 TDD---RSADDELKSWDADFVKVD 90
>gi|255539024|ref|XP_002510577.1| skp1, putative [Ricinus communis]
gi|223551278|gb|EEF52764.1| skp1, putative [Ricinus communis]
Length = 157
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 52/84 (61%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH E
Sbjct: 9 LKSSDGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYCKKHVETPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D +S DDDLKAWDA+ VKVD
Sbjct: 69 SED-RPSSADDDLKAWDAEFVKVD 91
>gi|118489534|gb|ABK96569.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 158
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SSDGE FE HMIEDDCA + IPLPNVT KI K I+YC KH E
Sbjct: 9 LRSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKKHVETPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D T S DD+LK WD + V+VD
Sbjct: 69 SEDRGTNSGDDELKNWDTEFVRVD 92
>gi|192910696|gb|ACF06456.1| kinetochore protein [Elaeis guineensis]
Length = 163
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 54/90 (60%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDGEVFE HMIEDDCA + IPLPNVT KI K I+YC +H
Sbjct: 8 LKSSDGEVFEVEEAVAMESQTIKHMIEDDCASNGIPLPNVTSKILSKVIEYCKRHVDFAA 67
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
S DD ++ DD+LK+WDA+ VKVD
Sbjct: 68 ASSRSTADDTSSKPADDELKSWDAEFVKVD 97
>gi|224065753|ref|XP_002301954.1| predicted protein [Populus trichocarpa]
gi|118485200|gb|ABK94461.1| unknown [Populus trichocarpa]
gi|222843680|gb|EEE81227.1| predicted protein [Populus trichocarpa]
Length = 157
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 53/84 (63%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIE+DCA + IPLPNVT KI K I+YC KH E
Sbjct: 9 LKSSDGEAFEVDEAVALESQTIKHMIEEDCADNAIPLPNVTSKILSKVIEYCKKHVETPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
DD +S DDDLK+WDA+ VKVD
Sbjct: 69 SDDRP-SSADDDLKSWDAEFVKVD 91
>gi|449450520|ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
Length = 157
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 53/84 (63%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE+FE HMIEDDCA IPLPNV KI K I+YC KH E+
Sbjct: 9 LKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHVESPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D T S+DDDLK WD++ VKVD
Sbjct: 69 PED-RTGSVDDDLKTWDSEFVKVD 91
>gi|224134024|ref|XP_002327737.1| predicted protein [Populus trichocarpa]
gi|118481562|gb|ABK92723.1| unknown [Populus trichocarpa]
gi|222836822|gb|EEE75215.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SSDGE FE HMIEDDCA + IPLPNVT KI K I+YC KH E
Sbjct: 9 LRSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKKHVETPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D T S DD+LK WD + V+VD
Sbjct: 69 PEDRGTNSGDDELKNWDTEFVRVD 92
>gi|356496612|ref|XP_003517160.1| PREDICTED: SKP1-like protein 1A-like [Glycine max]
Length = 155
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 53/84 (63%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH EA+
Sbjct: 9 LKSSDGEAFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVEAAN 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D + +DDLKAWDAD VKVD
Sbjct: 69 PEDKPS---EDDLKAWDADFVKVD 89
>gi|224083123|ref|XP_002306950.1| predicted protein [Populus trichocarpa]
gi|118487452|gb|ABK95554.1| unknown [Populus trichocarpa]
gi|222856399|gb|EEE93946.1| predicted protein [Populus trichocarpa]
Length = 157
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 14/85 (16%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA + IPLPNVT K+ K I+YC KH E+
Sbjct: 8 ILKSSDGESFEVDEAVAVESQTIKHMIEDDCADNGIPLPNVTSKVLAKVIEYCKKHVESP 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
DD +++ DDLKAWDA+ VKVD
Sbjct: 68 KSDDRPSSAA-DDLKAWDAEFVKVD 91
>gi|317106591|dbj|BAJ53099.1| JHL20J20.6 [Jatropha curcas]
Length = 100
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 52/84 (61%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKS+DGE FE HMIEDDCA + IPLPNVT KI K I+YC KH E
Sbjct: 9 LKSADGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVETPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
DD +S D++LK WDAD VKVD
Sbjct: 69 SDDRP-SSADEELKTWDADFVKVD 91
>gi|169647575|gb|ACA61784.1| SKP1-like protein 2 [Petunia x hybrida]
gi|253796268|gb|ACT35738.1| SKP1-like 1 [Petunia x hybrida]
Length = 154
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE F+ HMIEDDCA IPLPNVT +I K I+YC +H EAS
Sbjct: 7 VLKSSDGETFQVEESVAVESQTIKHMIEDDCADSSIPLPNVTSQILAKVIEYCKRHVEAS 66
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D AT +DDLK++DAD VKVD
Sbjct: 67 KSEDKAT---EDDLKSFDADFVKVD 88
>gi|225457883|ref|XP_002270061.1| PREDICTED: SKP1-like protein 1B isoform 2 [Vitis vinifera]
gi|147788379|emb|CAN76662.1| hypothetical protein VITISV_040452 [Vitis vinifera]
Length = 156
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 54/84 (64%), Gaps = 15/84 (17%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE F +HMIEDDCA + IPLPNVT KI K I+YC KH EA
Sbjct: 9 LKSSDGEAFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEAPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ + +D++LKAWDAD VKVD
Sbjct: 69 PEE--RSGVDEELKAWDADFVKVD 90
>gi|7573584|emb|CAB87834.1| putative kinetochore protein [Vicia faba var. minor]
Length = 124
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 52/84 (61%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I++C KH A+
Sbjct: 9 LKSSDGEAFEVDEAVALESQAIKHMIEDDCADSGIPLPNVTSKILAKVIEFCKKHVXAAA 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
DD T +D+LKAWDAD VKVD
Sbjct: 69 SDDKPT---EDELKAWDADFVKVD 89
>gi|82470781|gb|ABB77427.1| Skp1-like protein 2 [Petunia integrifolia subsp. inflata]
Length = 154
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE F+ HMIEDDCA IPLPNVT +I K I+YC +H EAS
Sbjct: 7 VLKSSDGETFQVEESVAVESQTIKHMIEDDCADSSIPLPNVTSQILAKVIEYCKRHVEAS 66
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D AT +DDLK++DAD VKVD
Sbjct: 67 KTEDKAT---EDDLKSFDADFVKVD 88
>gi|359806806|ref|NP_001241052.1| uncharacterized protein LOC100798104 [Glycine max]
gi|255641709|gb|ACU21125.1| unknown [Glycine max]
Length = 155
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 53/84 (63%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIED+CA IPLPNVT KI K I+YC KH EA+
Sbjct: 9 LKSSDGEAFEVEEAVAVESQTIKHMIEDNCADSGIPLPNVTSKILAKVIEYCKKHVEANC 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ + +D+LKAWDAD VKVD
Sbjct: 69 ADEKPS---EDELKAWDADFVKVD 89
>gi|386688464|gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium]
Length = 156
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 53/84 (63%), Gaps = 15/84 (17%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HM+EDDCA + IPLPNVT KI K I+YC KH +A+
Sbjct: 9 LKSSDGETFEVDEAVALESQTIKHMVEDDCADNGIPLPNVTSKILAKVIEYCKKHVDAAK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
DD + D+DLKAWD D VK+D
Sbjct: 69 PDDRPSN--DEDLKAWDTDFVKID 90
>gi|388513401|gb|AFK44762.1| unknown [Lotus japonicus]
Length = 155
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 52/84 (61%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HM+EDDCA IPLPN T KI K I+YC KH EA+
Sbjct: 9 LKSSDGEAFEVDEAVALESRTIKHMVEDDCADSGIPLPNATSKILAKVIEYCKKHVEAAN 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ T +D+LKAWDAD VKVD
Sbjct: 69 PDEKPT---EDELKAWDADFVKVD 89
>gi|255625783|gb|ACU13236.1| unknown [Glycine max]
Length = 155
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 53/84 (63%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HM+ED+CA IPLPNVT KI K I+YC KH EA+
Sbjct: 9 LKSSDGEAFEVEEAVAVESQTIKHMVEDNCADSGIPLPNVTSKILAKVIEYCKKHVEANC 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ + +D+LKAWDAD VKVD
Sbjct: 69 ADEKPS---EDELKAWDADFVKVD 89
>gi|351721426|ref|NP_001235929.1| uncharacterized protein LOC100527683 [Glycine max]
gi|255632942|gb|ACU16825.1| unknown [Glycine max]
Length = 155
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 52/84 (61%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH EA+
Sbjct: 9 LKSSDGEAFEVEEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVEAAN 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D + +DDLKAW A+ VKVD
Sbjct: 69 PEDKPS---EDDLKAWAAEFVKVD 89
>gi|224105153|ref|XP_002313704.1| predicted protein [Populus trichocarpa]
gi|222850112|gb|EEE87659.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 51/84 (60%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE F +HMIEDDCA + IPLPNVT KI K I+YC KH EA
Sbjct: 9 LKSSDGETFVVEEAVAVESQTIKHMIEDDCAENDIPLPNVTSKILAKVIEYCKKHVEADA 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D T D+ +K+WDA+ VKVD
Sbjct: 69 DKDATITGKDEFMKSWDAEFVKVD 92
>gi|3551838|gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]
Length = 153
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 17/86 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEA 46
+L+SSDGE FE HMIEDDCA IPLPNVT KI K I+YC +H D A
Sbjct: 5 VLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVDAA 64
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
S +D A ++DDLKA+DAD VKVD
Sbjct: 65 SKTEDKA---VEDDLKAFDADFVKVD 87
>gi|29468341|gb|AAO85510.1| SKP1 [Nicotiana benthamiana]
Length = 153
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 17/86 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEA 46
+L+SSDGE FE HMIEDDCA IPLPNVT KI K I+YC +H D A
Sbjct: 5 VLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVDAA 64
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
S +D A ++DDLKA+DAD VKVD
Sbjct: 65 SKTEDKA---VEDDLKAFDADFVKVD 87
>gi|192910918|gb|ACF06567.1| kinetochore protein [Elaeis guineensis]
Length = 164
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 54/92 (58%), Gaps = 20/92 (21%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---- 43
+LKSSDGEVFE HMIEDDCA + IPLPNVT KI K I+YC KH
Sbjct: 7 ILKSSDGEVFEVDEMVAMESQTIKHMIEDDCASNGIPLPNVTSKILSKVIEYCKKHVDAA 66
Query: 44 ---DEASMFDDLATTSIDDDLKAWDADLVKVD 72
S DD ++ ++DLK WDA+ VKVD
Sbjct: 67 AAAASKSATDDTSSKLGEEDLKTWDAEFVKVD 98
>gi|255580655|ref|XP_002531150.1| skp1, putative [Ricinus communis]
gi|223529263|gb|EEF31235.1| skp1, putative [Ricinus communis]
Length = 161
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 53/88 (60%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDE--- 45
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH E
Sbjct: 8 LKSSDGEPFEVDEVVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVETPK 67
Query: 46 -ASMFDDLATTSIDDDLKAWDADLVKVD 72
+S + ++ DD+LKAWDA+ VKVD
Sbjct: 68 SSSEDRTINNSNTDDELKAWDAEFVKVD 95
>gi|18410982|ref|NP_565123.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|71153764|sp|Q39255.1|SKP1A_ARATH RecName: Full=SKP1-like protein 1A; Short=SKP1-like 1; AltName:
Full=UFO-binding protein 1
gi|146387657|pdb|2P1M|A Chain A, Tir1-ask1 Complex Structure
gi|146387659|pdb|2P1N|A Chain A, Mechanism Of Auxin Perception By The Tir1 Ubiqutin
Ligase
gi|146387662|pdb|2P1N|D Chain D, Mechanism Of Auxin Perception By The Tir1 Ubiqutin
Ligase
gi|146387665|pdb|2P1O|A Chain A, Mechanism Of Auxin Perception By The Tir1 Ubiquitin
Ligase
gi|146387668|pdb|2P1P|A Chain A, Mechanism Of Auxin Perception By The Tir1 Ubiquitin
Ligase
gi|146387670|pdb|2P1Q|A Chain A, Mechanism Of Auxin Perception By The Tir1 Ubiquitin
Ligase
gi|185177933|pdb|3C6N|A Chain A, Small Molecule Agonists And Antagonists Of F-Box
Protein- Substrate Interactions In Auxin Perception And
Signaling
gi|185177935|pdb|3C6O|A Chain A, Small Molecule Agonists And Antagonists Of F-Box
Protein-Substrate Interactions In Auxin Perception And
Signaling
gi|185177937|pdb|3C6P|A Chain A, Small Molecule Agonists And Antagonists Of F-Box
Protein- Substrate Interactions In Auxin Perception And
Signaling
gi|308388069|pdb|3OGK|A Chain A, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388072|pdb|3OGK|C Chain C, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388075|pdb|3OGK|E Chain E, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388078|pdb|3OGK|G Chain G, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388080|pdb|3OGK|I Chain I, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388083|pdb|3OGK|K Chain K, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388086|pdb|3OGK|M Chain M, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388089|pdb|3OGK|O Chain O, Structure Of Coi1-Ask1 In Complex With Coronatine And An
Incomplete Jaz1 Degron
gi|308388092|pdb|3OGL|A Chain A, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388095|pdb|3OGL|C Chain C, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388098|pdb|3OGL|E Chain E, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388101|pdb|3OGL|G Chain G, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388103|pdb|3OGL|I Chain I, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388106|pdb|3OGL|K Chain K, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388109|pdb|3OGL|M Chain M, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388112|pdb|3OGL|O Chain O, Structure Of Coi1-Ask1 In Complex With Ja-Isoleucine And
The Jaz1 Degron
gi|308388115|pdb|3OGM|A Chain A, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|308388118|pdb|3OGM|C Chain C, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|308388121|pdb|3OGM|E Chain E, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|308388124|pdb|3OGM|G Chain G, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|308388126|pdb|3OGM|I Chain I, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|308388129|pdb|3OGM|K Chain K, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|308388132|pdb|3OGM|M Chain M, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|308388135|pdb|3OGM|O Chain O, Structure Of Coi1-Ask1 In Complex With Coronatine And
The Jaz1 Degron
gi|6721107|gb|AAF26761.1|AC007396_10 T4O12.17 [Arabidopsis thaliana]
gi|1432083|gb|AAB17535.1| homolog to Skp1p, an evolutionarily conserved kinetochore protein
in budding yeast [Arabidopsis thaliana]
gi|3068807|gb|AAC14444.1| Skp1 homolog [Arabidopsis thaliana]
gi|3719209|gb|AAC63109.1| UIP1 [Arabidopsis thaliana]
gi|19424110|gb|AAL87354.1| putative SKP1/ASK1 protein At1 [Arabidopsis thaliana]
gi|21281127|gb|AAM45019.1| putative SKP1/ASK1 protein At1 [Arabidopsis thaliana]
gi|332197659|gb|AEE35780.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 160
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 18/89 (20%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HM+EDDC + +PLPNVT KI K I+YC +H EA+
Sbjct: 7 VLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAA 66
Query: 48 MFD----DLATTSIDDDLKAWDADLVKVD 72
+ A TS DDDLKAWDAD +K+D
Sbjct: 67 ASKAEAVEGAATS-DDDLKAWDADFMKID 94
>gi|297839481|ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
lyrata]
gi|297333463|gb|EFH63881.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
lyrata]
Length = 703
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDE-- 45
+LKSSDGE FE HM+EDDC + +PLPNVT KI K I+YC KH E
Sbjct: 7 VLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKKHVEVA 66
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
A+ + + + D+DLKAWD + +K+D
Sbjct: 67 AAKSEAVDGATSDEDLKAWDTEFMKID 93
>gi|297844984|ref|XP_002890373.1| hypothetical protein ARALYDRAFT_889462 [Arabidopsis lyrata subsp.
lyrata]
gi|297336215|gb|EFH66632.1| hypothetical protein ARALYDRAFT_889462 [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 17/89 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA + IPLPNVT I K I+YC KH EA+
Sbjct: 7 ILKSSDGESFEIDEAVAVESQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAA 66
Query: 48 MF----DDLATTSIDDDLKAWDADLVKVD 72
+D ++ +D+LKAWD D VKVD
Sbjct: 67 AESGGDEDFCGSTENDELKAWDNDFVKVD 95
>gi|227184175|gb|ACP20181.1| SKP1-like protein [Citrus maxima]
Length = 158
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE H +EDDCA IPLPNVT I K I+YC KH EA
Sbjct: 9 LKSSDGETFEVEETVALESQTIKHTVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D S DDLK WDAD VKVD
Sbjct: 69 GDKKDDKSTVDDLKTWDADFVKVD 92
>gi|375968572|gb|AFB18000.1| SKP1 protein [Nicotiana tabacum]
Length = 155
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC +H +A+
Sbjct: 8 VLKSSDGETFEVEEAVALESQTIKHMIEDDCAGTSIPLPNVTSKILAKVIEYCKRHVDAT 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D A+ +D+LK +D+D VKVD
Sbjct: 68 KTEDKAS---EDELKGFDSDFVKVD 89
>gi|357516173|ref|XP_003628375.1| SKP1-like protein [Medicago truncatula]
gi|355522397|gb|AET02851.1| SKP1-like protein [Medicago truncatula]
Length = 157
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E FE HMIEDDCA IPLPNVT KI K I+YC KH EA+
Sbjct: 10 LKSSDDETFEVEEAVALKSQTIKHMIEDDCAKTEIPLPNVTSKILAKVIEYCKKHVEATT 69
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+ + +DD+KAWDA+ VKVD
Sbjct: 70 SSEGKPS--EDDVKAWDAEFVKVD 91
>gi|225428047|ref|XP_002279232.1| PREDICTED: SKP1-like protein 1A [Vitis vinifera]
gi|147820987|emb|CAN73136.1| hypothetical protein VITISV_023042 [Vitis vinifera]
Length = 155
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SSDGE F +HMIED CA + IPLPNVT KI K I+YC KH E
Sbjct: 9 LRSSDGEAFDLEEVVAVESQTIKHMIEDGCADNAIPLPNVTSKILAKVIEYCKKHVETPK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ A ++D+LKAWDAD VKVD
Sbjct: 69 AEEHA---VNDELKAWDADFVKVD 89
>gi|169647577|gb|ACA61785.1| SKP1-like protein 3 [Petunia x hybrida]
Length = 155
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE F+ HMIEDDCA IPLPNVT KI K I+YC +H EA+
Sbjct: 8 VLKSSDGETFQVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVEAN 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D A+ +D+LK++D+D VKVD
Sbjct: 68 KAEDKAS---EDELKSFDSDFVKVD 89
>gi|357483877|ref|XP_003612225.1| SKP1-like protein [Medicago truncatula]
gi|109255188|gb|ABG27019.1| SKP1-like a [Medicago truncatula]
gi|217071242|gb|ACJ83981.1| unknown [Medicago truncatula]
gi|355513560|gb|AES95183.1| SKP1-like protein [Medicago truncatula]
gi|388519045|gb|AFK47584.1| unknown [Medicago truncatula]
Length = 155
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH EA+
Sbjct: 9 LKSSDGETFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVEAAA 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ + +D++K+WD + VKVD
Sbjct: 69 AEEKPS---EDEIKSWDGEFVKVD 89
>gi|82470777|gb|ABB77425.1| Skp1-like protein 3 [Petunia integrifolia subsp. inflata]
gi|253796264|gb|ACT35736.1| SKP1-like 2 [Petunia x hybrida]
Length = 155
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE F+ HMIEDDCA IPLPNVT KI K I+YC +H EA+
Sbjct: 8 VLKSSDGETFQVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVEAN 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D A+ +D+LK++D+D VKVD
Sbjct: 68 KSEDKAS---EDELKSFDSDFVKVD 89
>gi|182407844|gb|ACB87913.1| SKP1-like protein 1 [Malus x domestica]
Length = 156
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA + IPLPNVT KI K I+YC +H +A+
Sbjct: 10 LKSSDGESFEVEEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKRHVDAAK 69
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ + +DDLKAWD + VKVD
Sbjct: 70 PDEKIS---EDDLKAWDQEFVKVD 90
>gi|169647573|gb|ACA61783.1| SKP1-like protein 1 [Petunia x hybrida]
Length = 155
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE F+ HMIEDDCA IPLPNVT KI K I+YC +H EA+
Sbjct: 8 VLKSSDGETFQVEESVALESXTXKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVEAN 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D A+ +D+LK++D+D VKVD
Sbjct: 68 KSEDKAS---EDELKSFDSDFVKVD 89
>gi|297825065|ref|XP_002880415.1| hypothetical protein ARALYDRAFT_481069 [Arabidopsis lyrata subsp.
lyrata]
gi|297326254|gb|EFH56674.1| hypothetical protein ARALYDRAFT_481069 [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 53/89 (59%), Gaps = 17/89 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA + IPLPNVT I K I+YC KH EA+
Sbjct: 7 ILKSSDGESFEVDEAVAVESQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAA 66
Query: 48 MF----DDLATTSIDDDLKAWDADLVKVD 72
D ++ +D+LKAWD D VKVD
Sbjct: 67 AEAGGDKDFCGSTENDELKAWDNDFVKVD 95
>gi|18958257|dbj|BAB85607.1| kinetochore protein [Brassica juncea]
Length = 160
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 53/88 (60%), Gaps = 16/88 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HM+EDDC + IPLPNVT KI K I+YC KH +A+
Sbjct: 7 VLKSSDGESFEVDEAVALESQTIAHMVEDDCVDNGIPLPNVTSKILAKVIEYCKKHVDAA 66
Query: 48 MFDDLAT---TSIDDDLKAWDADLVKVD 72
A S DDDLKAWDA+ +K+D
Sbjct: 67 ASKTEAVDGGASSDDDLKAWDAEFMKID 94
>gi|351726854|ref|NP_001235349.1| uncharacterized protein LOC100306458 [Glycine max]
gi|255628601|gb|ACU14645.1| unknown [Glycine max]
Length = 155
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 50/84 (59%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH EA+
Sbjct: 9 LKSSDGEAFEVEEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVEANS 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ + +D LKAWD D V VD
Sbjct: 69 ADEKPS---EDVLKAWDVDFVNVD 89
>gi|297791859|ref|XP_002863814.1| hypothetical protein ARALYDRAFT_917589 [Arabidopsis lyrata subsp.
lyrata]
gi|297309649|gb|EFH40073.1| hypothetical protein ARALYDRAFT_917589 [Arabidopsis lyrata subsp.
lyrata]
Length = 169
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 24/95 (25%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS- 47
LKSSDGE FE HMIEDDCA + IPLPNVT KI K I+YC KH EA+
Sbjct: 9 LKSSDGENFEIDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEAAA 68
Query: 48 ----------MFDDLATTSIDDDLKAWDADLVKVD 72
+A+ S D+DLK WD++ +KVD
Sbjct: 69 KSETTTEAAATTTTVASGSSDEDLKTWDSEFIKVD 103
>gi|4959710|gb|AAD34458.1| Skp1 [Medicago sativa]
Length = 153
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH +A+
Sbjct: 7 LKSSDGETFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVDAAA 66
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D +D+LK+WD++ VKVD
Sbjct: 67 AEDKPN---EDELKSWDSEFVKVD 87
>gi|51292007|gb|AAT99735.1| SKP1 [Nicotiana tabacum]
Length = 155
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC +H +A+
Sbjct: 8 VLKSSDGETFEVEEAVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVDAT 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D A+ +D+LK +D+D VKVD
Sbjct: 68 KTEDKAS---EDELKGFDSDFVKVD 89
>gi|18958259|dbj|BAB85608.1| kinetochore protein [Brassica juncea]
Length = 160
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 53/88 (60%), Gaps = 16/88 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HM+EDDC + +PLPNVT KI K I+YC KH +A+
Sbjct: 7 VLKSSDGESFEVDEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKKHVDAA 66
Query: 48 MFDDLAT---TSIDDDLKAWDADLVKVD 72
A S DDDLKAWDA+ +K+D
Sbjct: 67 ASKSEAVDGGGSSDDDLKAWDAEFMKID 94
>gi|356558680|ref|XP_003547631.1| PREDICTED: LOW QUALITY PROTEIN: SKP1-like protein 4-like [Glycine
max]
Length = 145
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKS DGE FE HMIED+CA +R+PLPN T KI + IKYC KH +A+
Sbjct: 9 LKSLDGEAFEVEEAVAVKSQMIKHMIEDNCADNRVPLPNATNKILAEVIKYCKKHVDANC 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ + +D+LKAW+AD VKVD
Sbjct: 69 IDEKPS---EDELKAWEADFVKVD 89
>gi|224078347|ref|XP_002305525.1| predicted protein [Populus trichocarpa]
gi|222848489|gb|EEE86036.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE F +HMIEDDCA + IPLPNVT KI K I+YC KH EA
Sbjct: 9 LKSSDGETFVVDEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILAKVIEYCKKHVEAGS 68
Query: 49 FDDLATTSI---DDDLKAWDADLVKVD 72
+ T + D+ LK+WD + VKVD
Sbjct: 69 DKEKNVTGVAEKDESLKSWDTEFVKVD 95
>gi|118481770|gb|ABK92824.1| unknown [Populus trichocarpa]
Length = 161
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE F +HMIEDDCA + IPLPNVT KI K I+YC KH EA
Sbjct: 9 LKSSDGETFVVDEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILAKVIEYCKKHVEAGS 68
Query: 49 FDDLATTSI---DDDLKAWDADLVKVD 72
+ T + D+ LK+WD + VKVD
Sbjct: 69 DKEKNVTGVTEKDESLKSWDTEFVKVD 95
>gi|357483881|ref|XP_003612227.1| SKP1-like protein [Medicago truncatula]
gi|109255190|gb|ABG27020.1| SKP1-like b [Medicago truncatula]
gi|217071548|gb|ACJ84134.1| unknown [Medicago truncatula]
gi|217075170|gb|ACJ85945.1| unknown [Medicago truncatula]
gi|355513562|gb|AES95185.1| SKP1-like protein [Medicago truncatula]
gi|388502012|gb|AFK39072.1| unknown [Medicago truncatula]
Length = 155
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC KH +A+
Sbjct: 9 LKSSDGETFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVDAAA 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ +D+LK+WD++ VKVD
Sbjct: 69 AEEKPN---EDELKSWDSEFVKVD 89
>gi|217075460|gb|ACJ86090.1| unknown [Medicago truncatula]
Length = 155
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA IPLPNV KI K I+YC KH EA+
Sbjct: 9 LKSSDGETFEVDEAVALESQTIKHMIEDDCADSGIPLPNVASKILAKVIEYCKKHVEAAA 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ + +D++K+WD + VKVD
Sbjct: 69 AEEKPS---EDEIKSWDGEFVKVD 89
>gi|18958253|dbj|BAB85605.1| kinetochore protein [Brassica juncea]
Length = 160
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 16/88 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HM+EDDC + +PLPNVT KI K I+YC KH +A
Sbjct: 7 VLKSSDGESFEVDEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKKHVDAV 66
Query: 48 MFDDLAT---TSIDDDLKAWDADLVKVD 72
A S DDDLKAWDA+ +K+D
Sbjct: 67 ASKSEAVDGGGSSDDDLKAWDAEFMKID 94
>gi|47176688|gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid cultivar]
Length = 167
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 15/86 (17%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGEVFE ++IEDDC D +PLPNVT +I K I++C KH E +
Sbjct: 16 LKSSDGEVFEVEETVAMESQTIRNLIEDDCTADGVPLPNVTGRILAKVIEFCKKHVEIAA 75
Query: 49 F--DDLATTSIDDDLKAWDADLVKVD 72
D+ + D++LK WDAD VKVD
Sbjct: 76 LKADEGVDRAADEELKVWDADFVKVD 101
>gi|62467589|gb|AAX83944.1| Skp1 [Capsicum annuum]
Length = 156
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEA 46
+LKSSDGE FE HMIEDDCA IPLPNVT KI K ++YC KH D
Sbjct: 8 LLKSSDGETFEVDEAVALESQTIKHMIEDDCANTSIPLPNVTSKILSKVVEYCKKHVDAG 67
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
+ +D A+ +DDLK++D++ VKVD
Sbjct: 68 AKTEDKAS---EDDLKSFDSEFVKVD 90
>gi|2673868|emb|CAA75117.1| fimbriata-associated protein [Antirrhinum majus]
Length = 161
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 53/88 (60%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----D 44
L+SSDGEVFE HMIEDDCA + IPLPNVT KI K I+YC +H
Sbjct: 8 LRSSDGEVFEVEESLALESQTIKHMIEDDCADNVIPLPNVTGKILSKVIEYCKRHVDAAA 67
Query: 45 EASMFDDLATTSIDDDLKAWDADLVKVD 72
+ +T + DD+LKA+DAD VKVD
Sbjct: 68 AKADDKLASTGTSDDELKAFDADFVKVD 95
>gi|371781462|emb|CCA95090.1| putative S phase kinase-associated protein 1, partial [Laburnum
anagyroides]
Length = 95
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWD 65
+ + +HMIEDDCA IPLPNVT KI K I+YC KH EA+ ++ D+DLKAWD
Sbjct: 2 ESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVEAASSEEKPN---DEDLKAWD 58
Query: 66 ADLVKVD 72
AD VKVD
Sbjct: 59 ADFVKVD 65
>gi|18958255|dbj|BAB85606.1| kinetochore protein [Brassica juncea]
Length = 161
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 17/89 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEA 46
+LKSSDGE FE HM+EDDC + IPLPNVT KI K I+YC KH D A
Sbjct: 7 VLKSSDGESFEVDEAVARESQTLAHMVEDDCIENGIPLPNVTSKILAKVIEYCKKHVDAA 66
Query: 47 SMFDDLA---TTSIDDDLKAWDADLVKVD 72
+ + A S DDDLKAWD + +K+D
Sbjct: 67 AAKTEGAVDGAASSDDDLKAWDTEFMKID 95
>gi|18394828|ref|NP_564105.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75175292|sp|Q9LNT9.1|ASK4_ARATH RecName: Full=SKP1-like protein 4; Short=AtSK4
gi|8778984|gb|AAF79899.1|AC022472_8 Contains similarity to Skp1 mRNA from Medicago sativa gb|AF135596
and is a member of Skp1 family PF|01466 [Arabidopsis
thaliana]
gi|16648855|gb|AAL25617.1| At1g20140/T20H2_8 [Arabidopsis thaliana]
gi|20466137|gb|AAM19990.1| At1g20140/T20H2_8 [Arabidopsis thaliana]
gi|332191822|gb|AEE29943.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 163
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 17/89 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA + IPLPNVT I K I+YC KH EA+
Sbjct: 9 ILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAA 68
Query: 48 MF----DDLATTSIDDDLKAWDADLVKVD 72
D ++ +D+LK WD++ VKVD
Sbjct: 69 AEAGGDKDFYGSAENDELKNWDSEFVKVD 97
>gi|449495074|ref|XP_004159727.1| PREDICTED: SKP1-like protein 1A-like [Cucumis sativus]
Length = 155
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDG+ F+ HMIED+CA + IPLPNV KI K I+YC KH +AS
Sbjct: 8 ILKSSDGDYFQVDDAVALQSQTIRHMIEDNCAHNGIPLPNVNSKILAKVIQYCRKHVDAS 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
D L + +DDLK WD D V VD
Sbjct: 68 SADPLPS---EDDLKTWDRDFVNVD 89
>gi|449456839|ref|XP_004146156.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
Length = 155
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDG+ F+ HMIED+CA + IPLPNV KI K I+YC KH +AS
Sbjct: 9 LKSSDGDYFQVDDAVALQSQTIRHMIEDNCAHNGIPLPNVNSKILAKVIQYCRKHVDASS 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D L + +DDLK WD D V VD
Sbjct: 69 ADPLPS---EDDLKTWDRDFVNVD 89
>gi|357156821|ref|XP_003577587.1| PREDICTED: SKP1-like protein 1B-like isoform 1 [Brachypodium
distachyon]
gi|357156824|ref|XP_003577588.1| PREDICTED: SKP1-like protein 1B-like isoform 2 [Brachypodium
distachyon]
Length = 181
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 52/101 (51%), Gaps = 30/101 (29%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDGE FE HMIEDDCA + IPLPNV KI K I+YCNKH
Sbjct: 15 LKSSDGEEFEVEETVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHATA 74
Query: 44 ------------DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+ A+ + T + +DLK WDAD VKVD
Sbjct: 75 AAKAANPSDGDANPAAANNSSTTAAPGEDLKNWDADFVKVD 115
>gi|2673870|emb|CAA75118.1| fimbriata-associated protein [Antirrhinum majus]
Length = 165
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---DE 45
L+SSDGEVFE HMIEDDCA + IPLPNVT KI K I+YC +H D
Sbjct: 12 LRSSDGEVFEVDEAIALLSQTIKHMIEDDCADNVIPLPNVTGKILSKVIEYCKRHVDADA 71
Query: 46 ASMFDDLATTSI-DDDLKAWDADLVKVD 72
A + +A + DDDLKA+DAD VKVD
Sbjct: 72 AKSEEKVAAAAAGDDDLKAFDADFVKVD 99
>gi|82470779|gb|ABB77426.1| Skp1-like protein 1 [Petunia integrifolia subsp. inflata]
gi|169647579|gb|ACA61786.1| SKP1-like protein 4 [Petunia x hybrida]
Length = 156
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA IPLPNVT KI K I+YC +H EA+
Sbjct: 8 VLKSSDGETFEVEESVALESQTIKHMIEDDCADSSIPLPNVTSKILAKVIEYCKRHVEAA 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
D + ++DLK +DA+ VKVD
Sbjct: 68 AKTDDKVS--EEDLKNFDAEFVKVD 90
>gi|18958251|dbj|BAB85604.1| kinetochore protein [Brassica juncea]
Length = 145
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 16/88 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HM+EDD + IPLPNVT KI K I+YC KH +A+
Sbjct: 2 VLKSSDGESFEVDEAVALESQTIAHMVEDDGVDNGIPLPNVTSKILAKVIEYCKKHVDAA 61
Query: 48 MFDDLAT---TSIDDDLKAWDADLVKVD 72
A S DDDLKAWDA+ +K+D
Sbjct: 62 ASKTEAVDGGASSDDDLKAWDAEFMKID 89
>gi|356553341|ref|XP_003545015.1| PREDICTED: SKP1-like protein 1A-like [Glycine max]
Length = 110
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 18/86 (20%)
Query: 2 LKSSDGEVF---------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEA 46
LKSSDGE F + MIED+CA IPLPNVT KI K I YC KH EA
Sbjct: 9 LKSSDGETFEVEEAVAVAVESQTIKLMIEDNCADSGIPLPNVTSKILAKVIDYCKKHVEA 68
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+ + +D+LKAWDAD VKVD
Sbjct: 69 NCADEKPS---EDELKAWDADFVKVD 91
>gi|449454215|ref|XP_004144851.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
gi|449508821|ref|XP_004163420.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
Length = 155
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L+SSDGE F +HMIEDDCA IPLPNVT I K I+YC H E
Sbjct: 8 VLRSSDGETFDVDEIVAVESQTIKHMIEDDCADTVIPLPNVTSAILSKVIEYCKMHVET- 66
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
DD + IDD LK WDA+ VKVD
Sbjct: 67 --DDKDSKVIDDTLKTWDAEFVKVD 89
>gi|225428043|ref|XP_002277864.1| PREDICTED: uncharacterized protein LOC100257179 [Vitis vinifera]
Length = 438
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SSDG F +HMIED CA + IPLPNVT KI + I+YC KH E
Sbjct: 292 LQSSDGMFFYVDVAVAMESQTIKHMIEDRCADNAIPLPNVTSKILARVIEYCKKHVETPK 351
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ A ++D+L+AWDAD VKVD
Sbjct: 352 AEEHA---VNDELRAWDADFVKVD 372
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 16/83 (19%)
Query: 1 MLKSSDGE-------------VFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L+SS+GE V + +IE+ IPLPNVT KI K I+YC KH E
Sbjct: 8 ILRSSEGEDFGLHVVAAMELLVIKPIIEEGNTKRAIPLPNVTSKILAKVIEYCKKHVETP 67
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
++ A ++D+LK W AD K
Sbjct: 68 KAEEHA---VNDELKGWAADFFK 87
>gi|357502745|ref|XP_003621661.1| SKP1-like protein [Medicago truncatula]
gi|355496676|gb|AES77879.1| SKP1-like protein [Medicago truncatula]
Length = 156
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E FE HMIEDDC + IP+PNVT +I K I+YC KH +A+
Sbjct: 10 LKSSDNETFEVPEAVALESQTIKHMIEDDCTDNGIPVPNVTGQILAKVIEYCKKHVDAAS 69
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ + +DDLK WDA+ VKVD
Sbjct: 70 SDEKPS---EDDLKNWDAEFVKVD 90
>gi|84579463|dbj|BAE72119.1| SKP1-like protein [Silene latifolia]
Length = 160
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDE-- 45
+LKSSDGE FE HMIEDDCA + IPLPNVT KI K I+YC KH E
Sbjct: 12 LLKSSDGEDFEVDQIVALESQTIKHMIEDDCADNAIPLPNVTGKILSKVIEYCKKHVEFA 71
Query: 46 ---------ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ TT +DDDLK WD + VKVD
Sbjct: 72 EKNKGETTTTTSAAGTGTTPVDDDLKNWDTEFVKVD 107
>gi|18422184|ref|NP_568603.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|71153765|sp|Q9FHW7.1|SKP1B_ARATH RecName: Full=SKP1-like protein 1B; AltName: Full=SKP1-like 2;
AltName: Full=UFO-binding protein 2
gi|3068809|gb|AAC14445.1| Skp1 homolog [Arabidopsis thaliana]
gi|9757964|dbj|BAB08452.1| UIP2 [Arabidopsis thaliana]
gi|28466911|gb|AAO44064.1| At5g42190 [Arabidopsis thaliana]
gi|110743841|dbj|BAE99755.1| UIP2 [Arabidopsis thaliana]
gi|332007394|gb|AED94777.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 171
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 26/97 (26%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDC + IPLPNVT KI K I+YC +H EA+
Sbjct: 9 LKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAE 68
Query: 49 FDD-------------LATTSIDDDLKAWDADLVKVD 72
+ +A+ S D+DLK WD++ +KVD
Sbjct: 69 KSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVD 105
>gi|18400912|ref|NP_565604.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75206636|sp|Q9SL93.1|ASK3_ARATH RecName: Full=SKP1-like protein 3; Short=AtSK3
gi|4874308|gb|AAD31370.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative
[Arabidopsis thaliana]
gi|15450665|gb|AAK96604.1| At2g25700/F3N11.15 [Arabidopsis thaliana]
gi|22655042|gb|AAM98112.1| At2g25700/F3N11.15 [Arabidopsis thaliana]
gi|330252645|gb|AEC07739.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 163
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 17/89 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDC + IPLPNVT I K I+YC KH EA+
Sbjct: 9 ILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAA 68
Query: 48 MF----DDLATTSIDDDLKAWDADLVKVD 72
D ++ + +LK WD D VKVD
Sbjct: 69 AEAGGDKDFYGSTENHELKTWDNDFVKVD 97
>gi|253760535|ref|XP_002488987.1| hypothetical protein SORBIDRAFT_0702s002010 [Sorghum bicolor]
gi|241947392|gb|EES20537.1| hypothetical protein SORBIDRAFT_0702s002010 [Sorghum bicolor]
Length = 277
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDAD 67
+ HMIEDDCA + IPLPNV+ KI K I+YCNKH A+ D A + +DLK+WDA+
Sbjct: 23 QTIRHMIEDDCADNGIPLPNVSSKILAKVIEYCNKHVHAAAADTTAASGDGEDLKSWDAE 82
Query: 68 LVKVD 72
VKVD
Sbjct: 83 FVKVD 87
>gi|84579467|dbj|BAE72121.1| SKP1-like protein [Silene latifolia]
Length = 173
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDGE FE HMIEDDCA + IPLPNVT KI K I+YC KH E +
Sbjct: 12 LLKSSDGEDFEVDQIVALESQTIKHMIEDDCADNAIPLPNVTGKILSKVIEYCKKHVEFA 71
Query: 48 -----------MFDDLATTSIDDDLKAWDADLVKVD 72
TT +DDDLK WD + VKVD
Sbjct: 72 EKNKGETTTTTSAAGTGTTPVDDDLKNWDTEFVKVD 107
>gi|357144995|ref|XP_003573486.1| PREDICTED: SKP1-like protein 1B-like isoform 1 [Brachypodium
distachyon]
Length = 168
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 51/91 (56%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDGE FE HMIEDDCA + IPLPNV KI K I+YCNKH
Sbjct: 12 LKSSDGEEFEVEETVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHAAD 71
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D A+ A + DDLK WDAD VKVD
Sbjct: 72 ATDAAAANTSAAPAAPTDDLKNWDADFVKVD 102
>gi|3719211|gb|AAC63110.1| UIP2 [Arabidopsis thaliana]
Length = 172
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 26/97 (26%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDC + IPLPNVT KI K I+YC +H EA+
Sbjct: 10 LKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAE 69
Query: 49 FDD-------------LATTSIDDDLKAWDADLVKVD 72
+ +A+ S D+DLK WD++ +KVD
Sbjct: 70 KSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVD 106
>gi|7573582|emb|CAB87813.1| putative kinetochore protein [Hordeum vulgare subsp. vulgare]
Length = 117
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 11 EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSID-----DDLKAWD 65
+HMIEDDCA + IPLPNV KI K I+YCNKH +A D + D DDLK WD
Sbjct: 1 KHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVQAKPADAAGPGASDALPPADDLKNWD 60
Query: 66 ADLVKVD 72
A+ VKVD
Sbjct: 61 AEFVKVD 67
>gi|81248477|gb|ABB69022.1| SKP1 [Brassica napus]
Length = 160
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 16/88 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSD E FE HM+EDDC + IPLPNVT KI K I+YC KH +A+
Sbjct: 7 VLKSSDNESFEVDEAVARESQTLAHMVEDDCTDNDIPLPNVTGKILAKVIEYCKKHVDAA 66
Query: 48 MFDDL---ATTSIDDDLKAWDADLVKVD 72
S DDDLKAWDA+ +K+D
Sbjct: 67 AAKTEAADGGASSDDDLKAWDAEFMKID 94
>gi|84579465|dbj|BAE72120.1| SKP1-like protein [Silene latifolia]
Length = 203
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS-MFDDLATTSIDDDLKAW 64
+ +HMIEDDCA + IPLPN+T I K I+YC KH EAS + T S D LK W
Sbjct: 70 QSQTIKHMIEDDCADNAIPLPNITAYILDKVIEYCEKHVEASHTYTPSDTPSPADQLKKW 129
Query: 65 DADLVKVD 72
DA+ KVD
Sbjct: 130 DAEFAKVD 137
>gi|255600665|ref|XP_002537506.1| skp1, putative [Ricinus communis]
gi|223516097|gb|EEF24877.1| skp1, putative [Ricinus communis]
Length = 158
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE F +H+I+DDCA IP+PNVT KI K I+YC KH +
Sbjct: 9 LKSSDGETFDVEEAVAVESQTIKHIIDDDCADSVIPIPNVTGKILSKVIEYCKKHVADAA 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
F D DD LK+WDAD V+VD
Sbjct: 69 FKDNDNKDSDDALKSWDADFVRVD 92
>gi|357144998|ref|XP_003573487.1| PREDICTED: SKP1-like protein 1B-like isoform 2 [Brachypodium
distachyon]
Length = 157
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 49/90 (54%), Gaps = 20/90 (22%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDGE FE HMIEDDCA + IPLPNV KI K I+YCNKH
Sbjct: 12 LKSSDGEEFEVEETVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHAAD 71
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKV 71
D A+ A + DDLK WDAD VK
Sbjct: 72 ATDAAAANTSAAPAAPTDDLKNWDADFVKA 101
>gi|40644754|emb|CAE53885.1| putative SKP1 protein [Triticum aestivum]
Length = 174
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 50/94 (53%), Gaps = 23/94 (24%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS- 47
LKSSDG + HMIEDDCA + IPLPNV KI K I+YCNKH +A
Sbjct: 15 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVQAKP 74
Query: 48 ---------MFDDLATTSIDDDLKAWDADLVKVD 72
D A T+ +DLK WDA+ VKVD
Sbjct: 75 ADGAAAAAGASDAAAPTAPAEDLKNWDAEFVKVD 108
>gi|297744601|emb|CBI37863.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
MIED CA + IPLPNVT KI K I+YC KH E ++ A ++D+LKAWDAD VKVD
Sbjct: 1 MIEDGCADNAIPLPNVTSKILAKVIEYCKKHVETPKAEEHA---VNDELKAWDADFVKVD 57
>gi|351066165|gb|AEQ39057.1| putative SKP1-like protein 1 [Wolffia arrhiza]
Length = 169
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 23/94 (24%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDG + +HMIEDDCA + IPLPNVT KI K I+YC KH +A+
Sbjct: 10 LKSSDGEEFEVEEAVAMESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVDAAA 69
Query: 49 FDDL----------ATTSIDDDLKAWDADLVKVD 72
++D++KAWDA+ VKVD
Sbjct: 70 AASAAKSSESVSLGGERGVEDEIKAWDAEFVKVD 103
>gi|106879633|emb|CAJ38400.1| fimbriata-associated protein [Plantago major]
Length = 186
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF-------DDLATTS-I 57
+ + +HMIEDDCA + IPLPNVT KI K I+YC +H +A+ D LA+T+
Sbjct: 46 ESQTIKHMIEDDCADNVIPLPNVTGKILSKVIEYCKRHVDAAAANTAAKAEDKLASTAPT 105
Query: 58 DDDLKAWDADLVKVD 72
DDDLKA+D D VKVD
Sbjct: 106 DDDLKAFDTDFVKVD 120
>gi|7378764|emb|CAB85491.1| putative kinetochore protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 49/95 (51%), Gaps = 24/95 (25%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDG + HMIEDDCA + IPLPNV KI K I+YCNKH +A
Sbjct: 15 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVQAKP 74
Query: 49 FD-----------DLATTSIDDDLKAWDADLVKVD 72
D A + +DLK WDA+ VKVD
Sbjct: 75 ADAGASSDTASAAXGAPAAPAEDLKNWDAEFVKVD 109
>gi|52076056|dbj|BAD46569.1| putative UIP2 [Oryza sativa Japonica Group]
gi|215768886|dbj|BAH01115.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202539|gb|EEC84966.1| hypothetical protein OsI_32208 [Oryza sativa Indica Group]
gi|222642001|gb|EEE70133.1| hypothetical protein OsJ_30167 [Oryza sativa Japonica Group]
Length = 175
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 26/97 (26%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+S +G+VFE HMIED CA IPLPNV+ KI K I+YC+KH EA
Sbjct: 13 LRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKVIEYCSKHVEARG 72
Query: 49 FDDL-------------ATTSIDDDLKAWDADLVKVD 72
A +++D+LK +DA+ VKVD
Sbjct: 73 GAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVD 109
>gi|242070865|ref|XP_002450709.1| hypothetical protein SORBIDRAFT_05g012740 [Sorghum bicolor]
gi|241936552|gb|EES09697.1| hypothetical protein SORBIDRAFT_05g012740 [Sorghum bicolor]
Length = 176
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 49/99 (49%), Gaps = 28/99 (28%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDG + HMIEDDCA + IPLPNV KI K I+YCNKH
Sbjct: 12 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHAAA 71
Query: 44 ----------DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D+ +T + +DLK WDAD VKVD
Sbjct: 72 AAAAASKAGSDDVGAAAANSTAASGEDLKNWDADFVKVD 110
>gi|194702186|gb|ACF85177.1| unknown [Zea mays]
gi|194702794|gb|ACF85481.1| unknown [Zea mays]
gi|194703762|gb|ACF85965.1| unknown [Zea mays]
gi|194704708|gb|ACF86438.1| unknown [Zea mays]
gi|195606646|gb|ACG25153.1| SKP1-like protein 1A [Zea mays]
gi|413920892|gb|AFW60824.1| SKP1-like protein 1A isoform 1 [Zea mays]
gi|413920893|gb|AFW60825.1| SKP1-like protein 1A isoform 2 [Zea mays]
Length = 176
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 49/99 (49%), Gaps = 28/99 (28%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDG + HMIEDDCA + IPLPNV KI K I+YCNKH
Sbjct: 12 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHAAA 71
Query: 44 ----------DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D+ +T + +DLK WDAD VKVD
Sbjct: 72 AAAAASKAGSDDVGAASANSTAASGEDLKNWDADFVKVD 110
>gi|293337209|ref|NP_001168727.1| uncharacterized protein LOC100382519 [Zea mays]
gi|223950429|gb|ACN29298.1| unknown [Zea mays]
gi|414864197|tpg|DAA42754.1| TPA: hypothetical protein ZEAMMB73_293473 [Zea mays]
Length = 519
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
ML+SSD + FE M+ED CA IPLPNVT I K I+YCNKH E +
Sbjct: 13 MLRSSDNQEFEVKESVAMQSMTLKKMVEDGCADKGIPLPNVTSHILVKVIEYCNKHAEPT 72
Query: 48 MFDDLATT---SIDDDLKAWDADLVKVD 72
D A T S +D+L +DAD V V+
Sbjct: 73 GPGDAAGTTNRSAEDELNIFDADFVNVE 100
>gi|414864196|tpg|DAA42753.1| TPA: hypothetical protein ZEAMMB73_293473 [Zea mays]
Length = 482
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
ML+SSD + FE M+ED CA IPLPNVT I K I+YCNKH E +
Sbjct: 13 MLRSSDNQEFEVKESVAMQSMTLKKMVEDGCADKGIPLPNVTSHILVKVIEYCNKHAEPT 72
Query: 48 MFDDLATT---SIDDDLKAWDADLVKVD 72
D A T S +D+L +DAD V V+
Sbjct: 73 GPGDAAGTTNRSAEDELNIFDADFVNVE 100
>gi|7573587|emb|CAB87835.1| putative kinetochore protein [Vicia faba var. minor]
Length = 113
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 11 EHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLV 69
+HMIEDDCA + IPLPNVT +I K I+YC KH EA D+ D+K WDA+ V
Sbjct: 1 KHMIEDDCADETGIPLPNVTSRILAKVIEYCKKHVEAPKIDEYGMPVDGKDMKKWDAEFV 60
Query: 70 KVD 72
KVD
Sbjct: 61 KVD 63
>gi|241872564|gb|ACS69067.1| pollen specific SKP1-like protein LSK3 [Lilium longiflorum]
Length = 161
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 47/85 (55%), Gaps = 14/85 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDG FE +MIEDDC IPLPNV I K I+YC KH EA++
Sbjct: 11 LKSSDGVFFEVDQIVMMESQMLKNMIEDDCTEIIIPLPNVAGNILSKVIEYCKKHAEAAV 70
Query: 49 FDDLAT-TSIDDDLKAWDADLVKVD 72
+ + D+ LK WDA+LV VD
Sbjct: 71 ANPTGQDKAADEALKQWDAELVNVD 95
>gi|242079273|ref|XP_002444405.1| hypothetical protein SORBIDRAFT_07g021450 [Sorghum bicolor]
gi|241940755|gb|EES13900.1| hypothetical protein SORBIDRAFT_07g021450 [Sorghum bicolor]
Length = 168
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSI---DDDLK 62
+ + HMIEDDCA + IPLPNV KI K I+YCNKH A+ + +DLK
Sbjct: 33 ESQTIRHMIEDDCADNGIPLPNVNSKILAKVIEYCNKHVHAAAAQHAGLAAAAYDGEDLK 92
Query: 63 AWDADLVKVD 72
+WDA+ VKVD
Sbjct: 93 SWDAEFVKVD 102
>gi|226506810|ref|NP_001146785.1| uncharacterized protein LOC100280388 [Zea mays]
gi|219888747|gb|ACL54748.1| unknown [Zea mays]
Length = 123
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 48/99 (48%), Gaps = 28/99 (28%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDG + HMIED CA + IPLPNV KI K I+YCNKH
Sbjct: 12 LKSSDGEEFEVEEAVAMESQTIRHMIEDGCADNGIPLPNVNSKILSKVIEYCNKHVHAAA 71
Query: 44 ----------DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D+ +T + +DLK WDAD VKVD
Sbjct: 72 AAAAASKAGSDDVGAASANSTAASGEDLKNWDADFVKVD 110
>gi|326505822|dbj|BAJ91150.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 18/89 (20%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDG + H+IEDDCA + IPLPNV KI K I+YCNKH +A
Sbjct: 15 LKSSDGEEFEVEEAVAVESQTIRHLIEDDCADNGIPLPNVNSKILSKVIEYCNKHVQAKP 74
Query: 49 FDDLATTSID-----DDLKAWDADLVKVD 72
D + D DDLK WDA+ VKVD
Sbjct: 75 ADAAGAGASDAPPPADDLKNWDAEFVKVD 103
>gi|297744603|emb|CBI37865.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
MIED CA + IPLPNVT KI + I+YC KH E ++ A ++D+L+AWDAD VKVD
Sbjct: 1 MIEDRCADNAIPLPNVTSKILARVIEYCKKHVETPKAEEHA---VNDELRAWDADFVKVD 57
>gi|195618368|gb|ACG31014.1| SKP1-like protein 1A [Zea mays]
Length = 176
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 48/99 (48%), Gaps = 28/99 (28%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----- 43
LKSSDG + HMIEDDCA IPLPNV KI K I+YCNKH
Sbjct: 12 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADXGIPLPNVNSKILSKVIEYCNKHVHAAA 71
Query: 44 ----------DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D+ +T + +DLK WDAD VKVD
Sbjct: 72 AAAAASKAGSDDVGAASANSTAASGEDLKNWDADFVKVD 110
>gi|357149071|ref|XP_003574990.1| PREDICTED: SKP1-like protein 4-like [Brachypodium distachyon]
Length = 162
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 14/86 (16%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L+SSDG+ FE HMIEDDCA + IPLPNV KI K I+YC KH A+
Sbjct: 11 LLRSSDGKEFEVEEAVAKESRTILHMIEDDCADNGIPLPNVDAKILTKVIEYCKKHAAAA 70
Query: 48 MFDDLATTSI-DDDLKAWDADLVKVD 72
+ S DLK +DAD VKVD
Sbjct: 71 DPSAADSNSTAAADLKEFDADFVKVD 96
>gi|359496531|ref|XP_003635258.1| PREDICTED: SKP1-like protein 1A-like [Vitis vinifera]
Length = 178
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSDG FE HMIED + IPLPNVT I I+YC H E+S
Sbjct: 8 LMSSDGVTFEVDDTVALELQTIKHMIEDGFSDGAIPLPNVTSGILAMVIEYCKMHVESSK 67
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D S DD+LKAWDA+ VKVD
Sbjct: 68 SED---RSADDNLKAWDAEFVKVD 88
>gi|115443621|ref|NP_001045590.1| Os02g0101600 [Oryza sativa Japonica Group]
gi|113535121|dbj|BAF07504.1| Os02g0101600 [Oryza sativa Japonica Group]
gi|125537680|gb|EAY84075.1| hypothetical protein OsI_05456 [Oryza sativa Indica Group]
gi|125580460|gb|EAZ21391.1| hypothetical protein OsJ_04993 [Oryza sativa Japonica Group]
Length = 101
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 42/75 (56%), Gaps = 16/75 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF 49
LKSSDGE FE HMIED CA + IPLPNV KI K I+YCNKH AS
Sbjct: 14 LKSSDGEEFEVEAVGMESQTIRHMIEDKCADNGIPLPNVNSKILSKVIEYCNKHVHASAD 73
Query: 50 DDLATTSIDDDLKAW 64
D ++ DLK W
Sbjct: 74 DSTSSA----DLKNW 84
>gi|302143560|emb|CBI22121.3| unnamed protein product [Vitis vinifera]
Length = 2582
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSDG FE HMIED + IPLPNVT I I+YC H E+S
Sbjct: 8 LMSSDGVTFEVDDTVALELQTIKHMIEDGFSDGAIPLPNVTSGILAMVIEYCKMHVESSK 67
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D S DD+LKAWDA+ VKVD
Sbjct: 68 SED---RSADDNLKAWDAEFVKVD 88
>gi|147858672|emb|CAN81017.1| hypothetical protein VITISV_028248 [Vitis vinifera]
Length = 153
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSDG FE HMIED + IPLPNVT I I+YC H E+S
Sbjct: 8 LMSSDGVTFEVDDIVALELQTIKHMIEDGFSDGAIPLPNVTSGILAMVIEYCKMHVESSK 67
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D S DD+LKAWDA+ VKVD
Sbjct: 68 SED---RSADDNLKAWDAEFVKVD 88
>gi|212722282|ref|NP_001131741.1| SKP1-like protein 1A [Zea mays]
gi|194692400|gb|ACF80284.1| unknown [Zea mays]
gi|195620466|gb|ACG32063.1| SKP1-like protein 1A [Zea mays]
gi|413935146|gb|AFW69697.1| SKP1-like protein 1A [Zea mays]
Length = 163
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTS-IDDDLKAW 64
+ + HMIEDDCA + IPLPNV +I K I+YCN H A+ + S +DLK+W
Sbjct: 30 ESQTLRHMIEDDCADNGIPLPNVNSRILSKVIEYCNSHVHAAAKPADSAASEGGEDLKSW 89
Query: 65 DADLVKVD 72
DA VKVD
Sbjct: 90 DAKFVKVD 97
>gi|84579461|dbj|BAE72118.1| SKP1-like protein [Silene latifolia]
Length = 171
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 47/93 (50%), Gaps = 21/93 (22%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---- 43
MLKSSDGE F +HMIED+CA + IPLPNVT K K I+YC KH
Sbjct: 12 MLKSSDGENFVVDEIVALESQTIKHMIEDECADNAIPLPNVTAKTLSKVIEYCKKHVNAA 71
Query: 44 ----DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+ + DD+LK WD +KVD
Sbjct: 72 AAKTADTATTSTAGVAGGDDELKKWDEKFMKVD 104
>gi|414591692|tpg|DAA42263.1| TPA: hypothetical protein ZEAMMB73_199965 [Zea mays]
Length = 188
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 1 MLKSSDGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDD 60
M+KS E+ MIEDDCA + IPLPNV K I+YCNKH A+ A + D
Sbjct: 24 MMKS---EIIRFMIEDDCADNVIPLPNVNSKTLALVIEYCNKHVHATTSASSARGGGEVD 80
Query: 61 LKAWDADLVKV 71
LK WDA+ VKV
Sbjct: 81 LKKWDAEFVKV 91
>gi|147772240|emb|CAN73673.1| hypothetical protein VITISV_031861 [Vitis vinifera]
Length = 154
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSDG FE HMIED + IPLPNVT I I+YC H E+S
Sbjct: 8 LMSSDGVTFEVDDIVALELQTIKHMIEDGFSDGAIPLPNVTSGILAMVIEYCKMHVESSK 67
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D S DD+LKAWDA+ VKVD
Sbjct: 68 SED---RSADDNLKAWDAEFVKVD 88
>gi|18958249|dbj|BAB85603.1| kinetochore protein [Brassica juncea]
Length = 161
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 17/89 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSD E FE HM+EDDC + IPLPNVT KI K I+YC KH +A+
Sbjct: 7 VLKSSDDESFEVDEAVARESQTLAHMVEDDCTDNGIPLPNVTGKILAKVIEYCKKHVDAA 66
Query: 48 MFDDL----ATTSIDDDLKAWDADLVKVD 72
D+DLKAWDA+ + +D
Sbjct: 67 AAKTEATADGGAPSDEDLKAWDAEFMNID 95
>gi|357502741|ref|XP_003621659.1| SKP1-like protein [Medicago truncatula]
gi|355496674|gb|AES77877.1| SKP1-like protein [Medicago truncatula]
Length = 156
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 16/83 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E FE HMI+DDC + I +PNVT +I K I+YC KH +A+
Sbjct: 10 LKSSDNETFEVPEAVALELQTIKHMIKDDCTDNGILVPNVTGQILAKVIEYCKKHIDAAS 69
Query: 49 FDDLATTSIDDDLKAWDADLVKV 71
D+ + +DDLK WDA+ VKV
Sbjct: 70 SDEKPS---EDDLKNWDAEFVKV 89
>gi|297835180|ref|XP_002885472.1| hypothetical protein ARALYDRAFT_898638 [Arabidopsis lyrata subsp.
lyrata]
gi|297331312|gb|EFH61731.1| hypothetical protein ARALYDRAFT_898638 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 18/84 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE H+I+DDC IP+PNVT KI ++Y NKH
Sbjct: 8 LKSSDGESFEIKEEAARQSQTIFHLIDDDCTDKEIPVPNVTGKILSMVVEYLNKHHVGD- 66
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
A S D+DLK WDA+ +++D
Sbjct: 67 ----ANPSTDEDLKKWDAEFMQID 86
>gi|356558676|ref|XP_003547629.1| PREDICTED: SKP1-like protein 1A-like [Glycine max]
Length = 157
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKS D E FE HMIED+ +++PLPN T KI + IKYC KH +A+
Sbjct: 9 LKSLDVEAFEVEEAVAVKSQMIKHMIEDNYVDNKVPLPNATNKILAEVIKYCKKHVDANC 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ + +D+LKAW+AD VKVD
Sbjct: 69 TDEKPS---EDELKAWEADFVKVD 89
>gi|106879631|emb|CAJ38399.1| fimbriata-associated protein [Plantago major]
Length = 144
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF-------DDLATT-SI 57
+ + +HM+ED+CA IPLPNVT KI K I+YC +H +A+ + D LA+T +
Sbjct: 4 ESQTIKHMVEDECADSIIPLPNVTGKILSKVIEYCKRHVDAAAYSAAAKSDDKLASTATT 63
Query: 58 DDDLKAWDADLVKVD 72
DDDLK++D D VKVD
Sbjct: 64 DDDLKSFDTDFVKVD 78
>gi|297838341|ref|XP_002887052.1| hypothetical protein ARALYDRAFT_894320 [Arabidopsis lyrata subsp.
lyrata]
gi|297332893|gb|EFH63311.1| hypothetical protein ARALYDRAFT_894320 [Arabidopsis lyrata subsp.
lyrata]
Length = 168
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 18/90 (20%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---- 43
+L SS+GE FE HMIEDDCA + IPLP+V I K I+ C KH
Sbjct: 7 ILTSSNGESFEIDEAVAVESLTIKHMIEDDCAGNGIPLPSVIGGILAKVIECCKKHVETA 66
Query: 44 DEASMFD-DLATTSIDDDLKAWDADLVKVD 72
EA+ D D ++ + +LKAWDAD V+VD
Sbjct: 67 AEANGADKDFLGSTENKELKAWDADFVQVD 96
>gi|346466527|gb|AEO33108.1| hypothetical protein [Amblyomma maculatum]
Length = 191
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLAT-----TSIDDD 60
+ + HM+ED CA + IPLPNV +I K I+YC KH + + +T + DD+
Sbjct: 54 ESQTIRHMVEDGCAENGIPLPNVNSRILSKVIEYCKKHVDYAAASSSSTKGGEDKAGDDE 113
Query: 61 LKAWDADLVKVD 72
+K WDAD VKVD
Sbjct: 114 IKNWDADFVKVD 125
>gi|297835178|ref|XP_002885471.1| hypothetical protein ARALYDRAFT_898637 [Arabidopsis lyrata subsp.
lyrata]
gi|297331311|gb|EFH61730.1| hypothetical protein ARALYDRAFT_898637 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 18/84 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSDG+ FE HMIEDDCA IPLPNVT KI ++YC KH
Sbjct: 8 LTSSDGQTFEIKEDAARQCQIINHMIEDDCADREIPLPNVTGKILAMVLEYCKKH----H 63
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
DD A S D+DLK WD ++ D
Sbjct: 64 VDD-ANPSTDEDLKKWDEKFMEKD 86
>gi|32330695|gb|AAP79890.1| SKP1/ASK1-like protein [Triticum aestivum]
Length = 175
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 24/95 (25%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDE--- 45
LKSSDG + HMIEDDCA + IPLPNV KI K I+YCNKH +
Sbjct: 15 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVQAKP 74
Query: 46 --------ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ D A + +DLK WDA+ VKVD
Sbjct: 75 ADGAAAGAGAGASDAAPAAPAEDLKNWDAEFVKVD 109
>gi|297728323|ref|NP_001176525.1| Os11g0456300 [Oryza sativa Japonica Group]
gi|77550711|gb|ABA93508.1| SKP1-like protein 1B, putative, expressed [Oryza sativa Japonica
Group]
gi|255680071|dbj|BAH95253.1| Os11g0456300 [Oryza sativa Japonica Group]
Length = 173
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 48/96 (50%), Gaps = 25/96 (26%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE FE HMIEDDCA + IPLPNV KI K I+YCNKH A+
Sbjct: 12 LKSSDGEEFEVEEPVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHAAA 71
Query: 49 FDDLATTSI------------DDDLKAWDADLVKVD 72
+DLK WDAD VKVD
Sbjct: 72 AAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVD 107
>gi|116831226|gb|ABK28567.1| unknown [Arabidopsis thaliana]
Length = 154
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 45/86 (52%), Gaps = 19/86 (22%)
Query: 1 MLKSSDGEVFE--------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEA 46
+LKSSDG FE HM E+DC + IPLPNVT KI I+YCNKH
Sbjct: 7 ILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKH--- 63
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
D A DDDLK WD + ++ D
Sbjct: 64 --HVDAANPCSDDDLKKWDKEFMEKD 87
>gi|18403171|ref|NP_566694.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75274038|sp|Q9LSX9.1|ASK9_ARATH RecName: Full=SKP1-like protein 9; Short=AtSK9
gi|11994652|dbj|BAB02847.1| kinetechore (Skp1p-like) protein-like [Arabidopsis thaliana]
gi|91806455|gb|ABE65955.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 [Arabidopsis
thaliana]
gi|332643037|gb|AEE76558.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 153
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 45/86 (52%), Gaps = 19/86 (22%)
Query: 1 MLKSSDGEVFE--------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEA 46
+LKSSDG FE HM E+DC + IPLPNVT KI I+YCNKH
Sbjct: 7 ILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKH--- 63
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
D A DDDLK WD + ++ D
Sbjct: 64 --HVDAANPCSDDDLKKWDKEFMEKD 87
>gi|357493141|ref|XP_003616859.1| SKP1-like protein [Medicago truncatula]
gi|355518194|gb|AES99817.1| SKP1-like protein [Medicago truncatula]
Length = 155
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 17/85 (20%)
Query: 2 LKSSDGEVFE-------------HMIEDDCA-VDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
LKSSDGE FE +IEDDC IPL NVT I K I+YC KH E
Sbjct: 9 LKSSDGETFEIDEAVALESQTIKLLIEDDCVDYSGIPLSNVTSNILAKVIEYCKKHVEVG 68
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
++ S+ DDL+AW+++ VKVD
Sbjct: 69 SSEE---KSLKDDLRAWESEFVKVD 90
>gi|18411415|ref|NP_567090.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75182310|sp|Q9M1X5.1|ASK13_ARATH RecName: Full=SKP1-like protein 13; Short=AtSK13
gi|7019695|emb|CAB75820.1| Skp1-like protein [Arabidopsis thaliana]
gi|332646481|gb|AEE80002.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 154
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
ML SSDGE F+ HMIEDDC + +P+ NVT I K I+YC KH
Sbjct: 6 MLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKH---- 61
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
+ D T D+LK WDA+ +K
Sbjct: 62 VVSDSPTEESKDELKKWDAEFMK 84
>gi|18411417|ref|NP_567091.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75335818|sp|Q9M1X4.1|ASK5_ARATH RecName: Full=SKP1-like protein 5; Short=AtSK5
gi|7019696|emb|CAB75821.1| Skp1-like protein [Arabidopsis thaliana]
gi|67633710|gb|AAY78779.1| putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK1
[Arabidopsis thaliana]
gi|332646482|gb|AEE80003.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 153
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 43/84 (51%), Gaps = 22/84 (26%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
MLKSSDG+ FE HM+ED CA D IPL NVT KI I YC KH
Sbjct: 6 MLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKH---- 61
Query: 48 MFDDLATTSIDDDLKAWDADLVKV 71
+ ++DLK WDAD +K
Sbjct: 62 -----VKSKEEEDLKEWDADFMKT 80
>gi|238054065|gb|ACR38888.1| SKP1 [Pellia endiviifolia (species B)]
gi|238054083|gb|ACR38897.1| SKP1 [Pellia endiviifolia (species B)]
Length = 158
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+FE +MIED + IPLPNV+ KI K I+YC H E
Sbjct: 9 LKSSDDEMFEVEDVVAFESQTVKNMIEDTGTENAIPLPNVSSKILSKVIEYCKFHVETQK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + +D++K WDA+ VKVD
Sbjct: 69 AADDKPVATEDEIKTWDAEFVKVD 92
>gi|242063656|ref|XP_002453117.1| hypothetical protein SORBIDRAFT_04g000330 [Sorghum bicolor]
gi|241932948|gb|EES06093.1| hypothetical protein SORBIDRAFT_04g000330 [Sorghum bicolor]
Length = 169
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS-------MFDDLATTSID 58
+ + HMIEDDCA + IPLPNV KI K I+YCNKH A+ + A
Sbjct: 30 ESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHAAAKPAEGADANAAAAAGGG 89
Query: 59 DDLKAWDADLVKVD 72
+DLK WDA+ VKVD
Sbjct: 90 EDLKNWDAEFVKVD 103
>gi|297798468|ref|XP_002867118.1| hypothetical protein ARALYDRAFT_912943 [Arabidopsis lyrata subsp.
lyrata]
gi|297312954|gb|EFH43377.1| hypothetical protein ARALYDRAFT_912943 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 22/87 (25%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DE 45
+L SSDG+ FE HM+EDDCA + IPL NVT K K I+YC KH DE
Sbjct: 7 VLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCAANGIPLANVTSKTLAKVIEYCKKHHVDE 66
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
A+ +D+LK WD + ++ D
Sbjct: 67 ANPIS-------EDELKKWDTEFMETD 86
>gi|358344779|ref|XP_003636464.1| SKP1-like protein [Medicago truncatula]
gi|355502399|gb|AES83602.1| SKP1-like protein [Medicago truncatula]
Length = 158
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSDGE F+ HMIE+DCA + IPL +VT I I+YC KH +A+
Sbjct: 10 LNSSDGETFKVSKMVARESQVIKHMIEEDCANEAIPLQDVTANILAMVIEYCKKHVDAAA 69
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
S +DDL+ WDA+ VKVD
Sbjct: 70 ASSDGKPS-EDDLEDWDAEFVKVD 92
>gi|1737169|gb|AAB38862.1| homologue to SKP1 [Arabidopsis thaliana]
Length = 129
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 5/64 (7%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFD----DLATTSIDDDLKAWDADL 68
M+EDDC + + LPNVT KI K I+YC +H EA+ + A TS DDDLKAWDAD
Sbjct: 1 MVEDDCVDNGVLLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS-DDDLKAWDADF 59
Query: 69 VKVD 72
+K+D
Sbjct: 60 MKID 63
>gi|426263326|emb|CCG34083.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 158
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+F ++MIED + IPLPNV+ KI K I+YC H EA
Sbjct: 9 LKSSDDELFDVTEAVAFESQTIKNMIEDTGTANAIPLPNVSSKILSKVIEYCKFHVEAQK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + +D++K WD + VKVD
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVD 92
>gi|426263324|emb|CCG34082.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 158
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+F ++MIED + IPLPNV+ KI K I+YC H EA
Sbjct: 9 LKSSDDELFDATEAVAFESQTIKNMIEDTGTANAIPLPNVSSKILSKVIEYCKFHVEAQK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + +D++K WD + VKVD
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVD 92
>gi|168000655|ref|XP_001753031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695730|gb|EDQ82072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+FE +MIED IPLPNV+ KI K I+YC H E
Sbjct: 8 LKSSDDEMFEVDEAVAFESQAVKNMIEDTGIDAPIPLPNVSSKILAKVIEYCKYHVENQK 67
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + ++++KAWDAD VKVD
Sbjct: 68 PSDDKQATPEEEIKAWDADFVKVD 91
>gi|414591691|tpg|DAA42262.1| TPA: hypothetical protein ZEAMMB73_634836 [Zea mays]
Length = 194
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD----DLKA 63
E+ MIEDDCA + IPLPNV K I+YCNKH A + + +S DLK
Sbjct: 28 EIIRFMIEDDCADNVIPLPNVNSKTLALVIEYCNKHVHADAAETTSASSAGGGGEVDLKK 87
Query: 64 WDADLVKV 71
WDA+ VKV
Sbjct: 88 WDAEFVKV 95
>gi|62642287|gb|AAX92710.1| SCF ubiquitin ligase [Picea abies]
Length = 190
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+F ++MIED IPLPNV+ KI K I+YC H EA
Sbjct: 9 LKSSDDELFDVNEAVAFESQTIKNMIEDTGTASAIPLPNVSSKILSKVIEYCKYHVEAQK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + +D++K WD + VKVD
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVD 92
>gi|414591780|tpg|DAA42351.1| TPA: hypothetical protein ZEAMMB73_621555 [Zea mays]
Length = 192
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD----DLK 62
E+ MIEDDCA + IPLPNV K I+YCNKH A + + +S DLK
Sbjct: 27 SEIIRFMIEDDCADNVIPLPNVNSKTLALVIEYCNKHVHADAAETTSASSAGGGGEVDLK 86
Query: 63 AWDADLVKV 71
WDA+ VKV
Sbjct: 87 KWDAEFVKV 95
>gi|116785404|gb|ABK23709.1| unknown [Picea sitchensis]
Length = 92
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+F ++MIED IPLPNV+ KI K I+YC H EA
Sbjct: 9 LKSSDDELFDVNEAVAFESQTIKNMIEDTGTASAIPLPNVSSKILSKVIEYCKYHVEAQK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + +D++K WD + VKVD
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVD 92
>gi|116779632|gb|ABK21374.1| unknown [Picea sitchensis]
gi|116791780|gb|ABK26105.1| unknown [Picea sitchensis]
gi|116792608|gb|ABK26432.1| unknown [Picea sitchensis]
Length = 158
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+F ++MIED IPLPNV+ KI K I+YC H EA
Sbjct: 9 LKSSDDELFDVNEAVAFESQTIKNMIEDTGTASAIPLPNVSSKILSKVIEYCKYHVEAQK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + +D++K WD + VKVD
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVD 92
>gi|297820852|ref|XP_002878309.1| hypothetical protein ARALYDRAFT_907521 [Arabidopsis lyrata subsp.
lyrata]
gi|297324147|gb|EFH54568.1| hypothetical protein ARALYDRAFT_907521 [Arabidopsis lyrata subsp.
lyrata]
Length = 153
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 17/83 (20%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
ML+SSDGE F+ HM+EDDC D IP+ NVT K I+YC KH A+
Sbjct: 6 MLQSSDGESFQVEEAVAVQSQTIAHMVEDDCVGDGIPVSNVTGATLSKVIEYCKKHVVAA 65
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
+ T D+LK WDA+ +K
Sbjct: 66 E----SLTEEWDELKKWDAEFMK 84
>gi|297820854|ref|XP_002878310.1| hypothetical protein ARALYDRAFT_907522 [Arabidopsis lyrata subsp.
lyrata]
gi|297324148|gb|EFH54569.1| hypothetical protein ARALYDRAFT_907522 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 22/83 (26%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDG+ FE +M ED+CA + IPLPNVT KI I YC KH E++
Sbjct: 7 VLKSSDGKSFEVDEAVARKSVTINNMAEDECADNGIPLPNVTSKILKIVIAYCKKHVESN 66
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
++DLK WDAD +K
Sbjct: 67 E---------EEDLKEWDADFMK 80
>gi|116789307|gb|ABK25195.1| unknown [Picea sitchensis]
Length = 158
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSD E+F ++MIED IPLPNV+ KI K I+YC H EA
Sbjct: 9 LKSSDDELFDVNEAVAFESQTIKNMIEDTGTASAIPLPNVSSKILSKVIEYCKYHVEAQK 68
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + +D++K WD + VKVD
Sbjct: 69 PADEKSAISEDEIKTWDQEFVKVD 92
>gi|18403174|ref|NP_566695.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75335426|sp|Q9LSX8.1|ASK10_ARATH RecName: Full=SKP1-like protein 10; Short=AtSK10
gi|11994653|dbj|BAB02848.1| kinetechore (Skp1p-like) protein-like [Arabidopsis thaliana]
gi|67633652|gb|AAY78750.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 [Arabidopsis
thaliana]
gi|332643038|gb|AEE76559.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 152
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 18/83 (21%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+LKSSDG FE HM EDDC + IPLP VT KI I+YCNKH
Sbjct: 7 ILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKH---- 62
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
D A D+DLK WD + ++
Sbjct: 63 -HVDAANPCSDEDLKKWDKEFME 84
>gi|225428045|ref|XP_002279171.1| PREDICTED: SKP1-like protein 1A-like [Vitis vinifera]
Length = 160
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 21/89 (23%)
Query: 2 LKSSDGE-------------VFEHMIEDDCAV-----DRIPLPNVTIKIFYKAIKYCNKH 43
L+SS+GE V + MIE+ + + IPLPNVT KI K I+YC KH
Sbjct: 9 LRSSEGEDFGLDVVAAMELLVIKPMIEELQVIKPMIDNAIPLPNVTSKILAKVIEYCKKH 68
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
E ++ A ++D+LKAWDAD VKVD
Sbjct: 69 VETPKAEEHA---VNDELKAWDADFVKVD 94
>gi|414879477|tpg|DAA56608.1| TPA: hypothetical protein ZEAMMB73_397176 [Zea mays]
Length = 231
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 44/84 (52%), Gaps = 16/84 (19%)
Query: 1 MLKSSDGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM------FDDLAT 54
M+KS E+ MIEDDCA + IPLPNV K I+YCNKH A+ D T
Sbjct: 82 MMKS---EIIRFMIEDDCANNVIPLPNVNSKTLALVIEYCNKHVHAAAKPADDDSDAAET 138
Query: 55 TSIDD-------DLKAWDADLVKV 71
TS DLK WDA+ VKV
Sbjct: 139 TSASSAGGGGEVDLKKWDAEFVKV 162
>gi|311697311|gb|ADQ00179.1| E3 ubiquitin ligase [Chlamydomonas sp. ICE-L]
Length = 155
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSD +VFE +MIED + +PLPNV+ KI K I+YC H EA+
Sbjct: 6 LGSSDSQVFEVDEDVANLSETVKNMIEDTGVEELVPLPNVSGKILAKVIEYCKYHVEANK 65
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D + ++ +KAWDA+ VKVD
Sbjct: 66 KVDDKPSKTEEVVKAWDAEFVKVD 89
>gi|168001703|ref|XP_001753554.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695433|gb|EDQ81777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEA 46
L+SSD E+FE +MIED IPLPNV+ KI K I+YC H ++
Sbjct: 8 LRSSDDEMFEVDEAVAFESQAVKNMIEDTGKDAVIPLPNVSSKILAKVIEYCKYHVDNQK 67
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
DD S +DD+KAWDAD VKVD
Sbjct: 68 GATDDKPAAS-EDDIKAWDADFVKVD 92
>gi|357470441|ref|XP_003605505.1| SKP1-like protein [Medicago truncatula]
gi|355506560|gb|AES87702.1| SKP1-like protein [Medicago truncatula]
Length = 164
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 17/85 (20%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEAS 47
LKSSD E FE H+I+D+CA D IPLPNVT KI I++C KH +A+
Sbjct: 16 LKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKHVDAT 75
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
D+ + +D++ WD + VKVD
Sbjct: 76 SSDEKPS---EDEINKWDTEFVKVD 97
>gi|302790289|ref|XP_002976912.1| hypothetical protein SELMODRAFT_271223 [Selaginella
moellendorffii]
gi|302797745|ref|XP_002980633.1| hypothetical protein SELMODRAFT_154042 [Selaginella
moellendorffii]
gi|300151639|gb|EFJ18284.1| hypothetical protein SELMODRAFT_154042 [Selaginella
moellendorffii]
gi|300155390|gb|EFJ22022.1| hypothetical protein SELMODRAFT_271223 [Selaginella
moellendorffii]
Length = 157
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEAS 47
L+SSDGE+FE +MIED + IPLPNV KI K I+Y H D
Sbjct: 7 LRSSDGEMFEVDEAVALESQTVKNMIEDTGSDAPIPLPNVPSKILAKVIEYSKYHVDAQK 66
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
DD ++++KAWDA+ VKVD
Sbjct: 67 SGDDSKVVPTEEEIKAWDAEFVKVD 91
>gi|47054182|gb|AAT09201.1| skp1 protein [Oryza sativa Japonica Group]
gi|125534276|gb|EAY80824.1| hypothetical protein OsI_36004 [Oryza sativa Indica Group]
gi|125577051|gb|EAZ18273.1| hypothetical protein OsJ_33809 [Oryza sativa Japonica Group]
Length = 173
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 46/96 (47%), Gaps = 25/96 (26%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDG + HMIEDDCA + IPLPNV KI K I+YCNKH A+
Sbjct: 12 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHAAA 71
Query: 49 FDDLATTSI------------DDDLKAWDADLVKVD 72
+DLK WDAD VKVD
Sbjct: 72 AAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVD 107
>gi|414591683|tpg|DAA42254.1| TPA: SKP1-like protein 1A [Zea mays]
Length = 192
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD----DLKA 63
E+ MIEDDCA + IPL NV K I+YCNKH A + + + +S DLK
Sbjct: 28 EIIRFMIEDDCADNVIPLANVNSKTLALVIEYCNKHVHAEVAETTSASSAGGGGEVDLKK 87
Query: 64 WDADLVKV 71
WDA+ VKV
Sbjct: 88 WDAEFVKV 95
>gi|18403169|ref|NP_566693.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75274039|sp|Q9LSY0.1|ASK7_ARATH RecName: Full=SKP1-like protein 7; Short=AtSK7
gi|11994651|dbj|BAB02846.1| kinetechore (Skp1p-like) protein-like [Arabidopsis thaliana]
gi|332643036|gb|AEE76557.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 125
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 18/85 (21%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
MLKSSDG++FE HMIE +C + IP+ NVT +I I+YCNKH
Sbjct: 7 MLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKH---- 62
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
D A D+DLK WD + ++ D
Sbjct: 63 -HVDAANPCSDEDLKKWDKEFMEKD 86
>gi|226491066|ref|NP_001152391.1| SKP1-like protein 1A [Zea mays]
gi|195655821|gb|ACG47378.1| SKP1-like protein 1A [Zea mays]
Length = 192
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD----DLKA 63
E+ MIEDDCA + IPL NV K I+YCNKH A + + +S DLK
Sbjct: 28 EIIRFMIEDDCADNVIPLANVNSKTLALVIEYCNKHVHAEVAETTCASSAGGGGEVDLKK 87
Query: 64 WDADLVKV 71
WDA+ VKV
Sbjct: 88 WDAEFVKV 95
>gi|18395497|ref|NP_565296.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75318731|sp|O81057.1|ASK14_ARATH RecName: Full=SKP1-like protein 14; Short=AtSK14
gi|3548813|gb|AAC34485.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At14),
putative [Arabidopsis thaliana]
gi|67633516|gb|AAY78682.1| putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK1
[Arabidopsis thaliana]
gi|330250577|gb|AEC05671.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 149
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 26/85 (30%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DE 45
+L SSDGE FE HMIEDDC V +PL NVT KI ++YC KH DE
Sbjct: 7 VLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVVDE 66
Query: 46 ASMFDDLATTSIDDDLKAWDADLVK 70
S D+ K WD + +K
Sbjct: 67 ES-----------DEFKTWDEEFMK 80
>gi|357470453|ref|XP_003605511.1| SKP1 [Medicago truncatula]
gi|355506566|gb|AES87708.1| SKP1 [Medicago truncatula]
Length = 150
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 23/86 (26%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEA 46
+LKSSDGE F+ H+I+++CA D IPL NVT KI I+YC KH +A
Sbjct: 8 ILKSSDGETFKIEKAVAMQSQTIKHLIDEECANDTGIPLTNVTGKILAMVIEYCKKHVDA 67
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+L+ WDA+ VKVD
Sbjct: 68 AS---------SDELEKWDAEFVKVD 84
>gi|297744602|emb|CBI37864.3| unnamed protein product [Vitis vinifera]
Length = 151
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
IPLPNVT KI K I+YC KH E ++ A ++D+LKAWDAD VKVD
Sbjct: 39 IPLPNVTSKILAKVIEYCKKHVETPKAEEHA---VNDELKAWDADFVKVD 85
>gi|168017979|ref|XP_001761524.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687208|gb|EDQ73592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 15/85 (17%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEAS 47
L+SSD E+FE +MIED IPLPNV+ KI K I+YC H D
Sbjct: 8 LRSSDDEMFEVDEAVAFESQAVKNMIEDTGKDAVIPLPNVSSKILAKVIEYCKYHVDNQK 67
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D S +D++KAWDAD VKVD
Sbjct: 68 QGEDKPPAS-EDEIKAWDADFVKVD 91
>gi|414586609|tpg|DAA37180.1| TPA: hypothetical protein ZEAMMB73_521052 [Zea mays]
gi|414591685|tpg|DAA42256.1| TPA: hypothetical protein ZEAMMB73_963730 [Zea mays]
Length = 192
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD----DLKA 63
E+ MIEDDCA + IPL NV K I+YCNKH A + + +S DLK
Sbjct: 28 EIIRFMIEDDCADNVIPLANVNSKTLALVIEYCNKHVHADAAETTSASSAGGGGEVDLKK 87
Query: 64 WDADLVKV 71
WDA+ VKV
Sbjct: 88 WDAEFVKV 95
>gi|18395495|ref|NP_565295.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75318732|sp|O81058.1|ASK19_ARATH RecName: Full=SKP1-like protein 19; Short=AtSK19
gi|3548814|gb|AAC34486.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At19),
putative [Arabidopsis thaliana]
gi|67633514|gb|AAY78681.1| putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK1
[Arabidopsis thaliana]
gi|330250576|gb|AEC05670.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 200
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 13/56 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
+L SSDGE F+ H+IEDDCA ++IP+PNVT +I K I+YC KH
Sbjct: 7 VLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKH 62
>gi|357470461|ref|XP_003605515.1| SKP1-like protein [Medicago truncatula]
gi|355506570|gb|AES87712.1| SKP1-like protein [Medicago truncatula]
Length = 152
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 23/86 (26%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDEA 46
+LKSS+GE FE H+I D CA D IP+ NVT KI I+YC KH +A
Sbjct: 10 ILKSSEGETFEIEEAVAVQSQTIKHLIGDQCANDTEIPISNVTGKILAMVIEYCKKHVDA 69
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
D+L+ WDA+ V+VD
Sbjct: 70 VS---------SDELRKWDAEFVQVD 86
>gi|115476152|ref|NP_001061672.1| Os08g0375700 [Oryza sativa Japonica Group]
gi|27260972|dbj|BAC45089.1| putative SKP1-like protein [Oryza sativa Japonica Group]
gi|33243056|gb|AAQ01198.1| SKP1 [Oryza sativa Japonica Group]
gi|40253356|dbj|BAD05288.1| putative SKP1-like protein [Oryza sativa Japonica Group]
gi|113623641|dbj|BAF23586.1| Os08g0375700 [Oryza sativa Japonica Group]
gi|125603221|gb|EAZ42546.1| hypothetical protein OsJ_27112 [Oryza sativa Japonica Group]
Length = 169
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 22/92 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE FE HMIEDDC + +PLPNVT + K ++Y KH A+
Sbjct: 13 LLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFKKH--AA 70
Query: 48 MFDDLATTSI-------DDDLKAWDADLVKVD 72
+ AT ++ +++LK++DA+ V VD
Sbjct: 71 VTPKPATEAVAADKAKREEELKSFDAEFVDVD 102
>gi|125561352|gb|EAZ06800.1| hypothetical protein OsI_29044 [Oryza sativa Indica Group]
Length = 169
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 22/92 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE FE HMIEDDC + +PLPNVT + K ++Y KH A+
Sbjct: 13 LLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFKKH--AA 70
Query: 48 MFDDLATTSI-------DDDLKAWDADLVKVD 72
+ AT ++ +++LK++DA+ V VD
Sbjct: 71 VTPKPATEAVAADKAKREEELKSFDAEFVDVD 102
>gi|23495763|dbj|BAC19974.1| putative Skp1 [Oryza sativa Japonica Group]
gi|50509630|dbj|BAD31474.1| putative Skp1 [Oryza sativa Japonica Group]
gi|125557224|gb|EAZ02760.1| hypothetical protein OsI_24880 [Oryza sativa Indica Group]
gi|125599105|gb|EAZ38681.1| hypothetical protein OsJ_23075 [Oryza sativa Japonica Group]
Length = 164
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 20/85 (23%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE F +MIEDDC + +PLPNV K+ K I+YC KH A
Sbjct: 21 LLISSDGEHFNVPSAAASLSQLVSNMIEDDCTTNGVPLPNVASKVLAKVIEYCIKHAAAG 80
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+ + DLK++DA+ + VD
Sbjct: 81 EEE-------EKDLKSFDAEFIDVD 98
>gi|357516179|ref|XP_003628378.1| SKP1-like protein [Medicago truncatula]
gi|355522400|gb|AET02854.1| SKP1-like protein [Medicago truncatula]
Length = 130
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
+R PLPNVT KI K I+YC KH EA+ + +DD+KAWDA+ +KVD
Sbjct: 27 NRNPLPNVTSKILTKVIEYCKKHVEATTSSKEKPS--EDDVKAWDAEFIKVD 76
>gi|414591684|tpg|DAA42255.1| TPA: hypothetical protein ZEAMMB73_203044 [Zea mays]
Length = 172
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNK--HDEASMFDDLATTSIDD------ 59
E+ MIEDDC+ + IPLPNV K I+YCNK HD A D TT+
Sbjct: 28 EIIRFMIEDDCSDNVIPLPNVNSKTLALVIEYCNKHVHDAAKPADAAETTNASSAGGGGE 87
Query: 60 -DLKAWDADLVKV 71
DLK WDA+ KV
Sbjct: 88 VDLKKWDAEFGKV 100
>gi|116831423|gb|ABK28664.1| unknown [Arabidopsis thaliana]
Length = 153
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 22/80 (27%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DE 45
+L SSDG+ FE HM+EDDC D IPL NV KI K I+YC KH DE
Sbjct: 7 VLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDE 66
Query: 46 ASMFDDLATTSIDDDLKAWD 65
A+ ++DL WD
Sbjct: 67 ANPIS-------EEDLNNWD 79
>gi|388510104|gb|AFK43118.1| unknown [Medicago truncatula]
Length = 160
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSDGE+FE ++IED +RIP+P VT KI ++YC KH A
Sbjct: 14 LTSSDGEIFEIEKTVAVEFKTIKNLIEDVVDNNRIPIPKVTGKILALIVEYCKKHVNAVN 73
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D+ S + DLK WDA+ V++D
Sbjct: 74 SDE---KSSEHDLKTWDAEFVQLD 94
>gi|125561350|gb|EAZ06798.1| hypothetical protein OsI_29042 [Oryza sativa Indica Group]
Length = 169
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 22/92 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE FE HMIEDDC + +PLPNVT + K ++Y KH A+
Sbjct: 13 LLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFKKH--AA 70
Query: 48 MFDDLATTSI-------DDDLKAWDADLVKVD 72
+ AT ++ + +LK++DA+ V VD
Sbjct: 71 VTPKTATEAVAADKAKREKELKSFDAEFVDVD 102
>gi|18418399|ref|NP_567959.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75098745|sp|O49484.1|ASK11_ARATH RecName: Full=SKP1-like protein 11; Short=AtSK11
gi|2911041|emb|CAA17551.1| kinetochore (SKP1p)-like protein [Arabidopsis thaliana]
gi|7270371|emb|CAB80138.1| kinetochore (SKP1p)-like protein [Arabidopsis thaliana]
gi|91806766|gb|ABE66110.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 [Arabidopsis
thaliana]
gi|332660940|gb|AEE86340.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 152
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 22/80 (27%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DE 45
+L SSDG+ FE HM+EDDC D IPL NV KI K I+YC KH DE
Sbjct: 7 VLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDE 66
Query: 46 ASMFDDLATTSIDDDLKAWD 65
A+ ++DL WD
Sbjct: 67 ANPIS-------EEDLNNWD 79
>gi|414586608|tpg|DAA37179.1| TPA: hypothetical protein ZEAMMB73_638608 [Zea mays]
Length = 167
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNK--HDEASMFDDLATTSIDD------ 59
E+ MIEDDC+ + IPLPNV K I+YCNK HD A D TT+
Sbjct: 23 EIIRFMIEDDCSDNVIPLPNVNSKTLALVIEYCNKHVHDAAKPADAAETTNASSAGGGGE 82
Query: 60 -DLKAWDADLVKV 71
DLK WDA+ KV
Sbjct: 83 VDLKKWDAEFGKV 95
>gi|357470451|ref|XP_003605510.1| SKP1-like protein [Medicago truncatula]
gi|355506565|gb|AES87707.1| SKP1-like protein [Medicago truncatula]
Length = 175
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKS DGE F +H+I+D IP+PNVT KI K I+YC KH E +
Sbjct: 28 LKSYDGETFDIEEAVALESQTIKHLIDDVSDDTGIPIPNVTGKILAKVIEYCKKHVEYAR 87
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ +D+LK WDA+ V+VD
Sbjct: 88 SNEKPP---EDELKKWDAEFVQVD 108
>gi|47680278|gb|AAT37114.1| skp1-like protein [Oryza sativa Japonica Group]
Length = 169
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 22/92 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE FE HMIEDDC + +PLPNVT + K ++Y KH A+
Sbjct: 13 VLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFKKH--AA 70
Query: 48 MFDDLATTSI-------DDDLKAWDADLVKVD 72
+ AT ++ +++LK++DA+ V VD
Sbjct: 71 VTPKPATEAVAADKAKREEELKSFDAEFVDVD 102
>gi|49387820|dbj|BAD26413.1| putative SKP1 [Oryza sativa Japonica Group]
gi|49388748|dbj|BAD25948.1| putative SKP1 [Oryza sativa Japonica Group]
gi|125604974|gb|EAZ44010.1| hypothetical protein OsJ_28634 [Oryza sativa Japonica Group]
Length = 165
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 15/85 (17%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDG+ F+ +MIED C + +PLPNV + K ++YC KH A+
Sbjct: 16 LLISSDGQHFQVTEAEASMSKLVSNMIEDGCTENGVPLPNVASNVLAKVLEYCKKHAAAA 75
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D+A D +LK++DA + VD
Sbjct: 76 AAEDVAVK--DQELKSFDASFIDVD 98
>gi|125563013|gb|EAZ08393.1| hypothetical protein OsI_30653 [Oryza sativa Indica Group]
Length = 165
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 15/85 (17%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDG+ F+ +MIED C + +PLPNV + K ++YC KH A+
Sbjct: 16 LLISSDGQHFQVTEAEASMSKLVSNMIEDGCTENGVPLPNVASNVLAKVLEYCKKHAAAA 75
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
+D+A D +LK++DA + VD
Sbjct: 76 AAEDVAVK--DQELKSFDASFIDVD 98
>gi|242050004|ref|XP_002462746.1| hypothetical protein SORBIDRAFT_02g031280 [Sorghum bicolor]
gi|241926123|gb|EER99267.1| hypothetical protein SORBIDRAFT_02g031280 [Sorghum bicolor]
Length = 173
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 4 SSDGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLA--------TT 55
+ + +MIED CA + IPLPNV +I K I YC KH A D
Sbjct: 31 ARESRTIGNMIEDSCADNDIPLPNVNARILAKVIVYCRKHASARGGTDAGDAEPTAATNK 90
Query: 56 SIDDDLKAWDADLVKVD 72
+ +D+LK +DA+ VKVD
Sbjct: 91 ASEDELKTFDAEFVKVD 107
>gi|226531862|ref|NP_001141262.1| uncharacterized protein LOC100273349 [Zea mays]
gi|194703622|gb|ACF85895.1| unknown [Zea mays]
Length = 156
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 32/55 (58%), Gaps = 13/55 (23%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
LKSSDG + HMIEDDCA + IPLPNV KI K I+YCNKH
Sbjct: 12 LKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKH 66
>gi|194702570|gb|ACF85369.1| unknown [Zea mays]
Length = 167
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD-------- 59
E+ +IEDDCA + IPLPNV K I+YCNKH + D A + +
Sbjct: 28 EIIRLLIEDDCADNAIPLPNVDSKTLALVIEYCNKHVHVAADDSAAAETSNASSAGGGGE 87
Query: 60 -DLKAWDADLVKVD 72
DLK WDA+ VKV+
Sbjct: 88 VDLKKWDAEFVKVE 101
>gi|7529730|emb|CAB86910.1| kinetochore-like protein [Arabidopsis thaliana]
Length = 85
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVK 70
M EDDCA + IPLPNVT KI I+YC KH S ++DLK WDA+ +K
Sbjct: 1 MAEDDCADNGIPLPNVTSKILLLVIEYCKKH---------VVESKEEDLKKWDAEFMK 49
>gi|297814622|ref|XP_002875194.1| hypothetical protein ARALYDRAFT_904588 [Arabidopsis lyrata subsp.
lyrata]
gi|297321032|gb|EFH51453.1| hypothetical protein ARALYDRAFT_904588 [Arabidopsis lyrata subsp.
lyrata]
Length = 160
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 18/83 (21%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE FE HM+EDDC ++ IPL NVT I I+YC H
Sbjct: 7 VLTSSDGESFEVEEVVARKLQIVGHMLEDDCVINEIPLQNVTGDILSMVIEYCKTH---- 62
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
D+ + LK WD + +K
Sbjct: 63 -VDEEESEEAQTKLKTWDEEFMK 84
>gi|116831295|gb|ABK28601.1| unknown [Arabidopsis thaliana]
Length = 86
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 9 VFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADL 68
+ + M EDDCA + IPLPNVT KI I+YC KH S ++DLK WDA+
Sbjct: 2 MIKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKH---------VVESKEEDLKKWDAEF 52
Query: 69 VK 70
+K
Sbjct: 53 MK 54
>gi|195653755|gb|ACG46345.1| SKP1-like protein 1A [Zea mays]
Length = 160
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWD 65
+ + HMIEDDCA + IPLPNV +I K I Y + H A D A+ +DLK+WD
Sbjct: 30 ESQTLRHMIEDDCADNGIPLPNVNSRILSKVI-YSHVHAAAKPADSAASEG-GEDLKSWD 87
Query: 66 ADLVKVD 72
A VKVD
Sbjct: 88 AKFVKVD 94
>gi|18409761|ref|NP_566978.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|122180156|sp|Q1PEF6.1|ASK6_ARATH RecName: Full=SKP1-like protein 6; Short=AtSK6
gi|91806574|gb|ABE66014.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 [Arabidopsis
thaliana]
gi|332645509|gb|AEE79030.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 85
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 9 VFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADL 68
+ + M EDDCA + IPLPNVT KI I+YC KH S ++DLK WDA+
Sbjct: 2 MIKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKH---------VVESKEEDLKKWDAEF 52
Query: 69 VK 70
+K
Sbjct: 53 MK 54
>gi|226532770|ref|NP_001152275.1| SKP1-like protein 1A [Zea mays]
gi|195654545|gb|ACG46740.1| SKP1-like protein 1A [Zea mays]
Length = 176
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------ 59
E+ MIEDDCA IPLPNV K IKYCNKH A+ D A +
Sbjct: 26 QSEIIRFMIEDDCADSAIPLPNVDSKTLALVIKYCNKHVHAAADDSAAAETSSSASSAGG 85
Query: 60 ----DLKAWDADLVKVD 72
DLK WDA+ VKVD
Sbjct: 86 GGEVDLKKWDAEFVKVD 102
>gi|226529147|ref|NP_001149673.1| SKP1-like protein 1A [Zea mays]
gi|195629332|gb|ACG36307.1| SKP1-like protein 1A [Zea mays]
Length = 167
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH----------DEASMFDDLATTS 56
E+ +IEDDCA + IPLPNV K I+YCNKH E S A S
Sbjct: 27 SEIIRLLIEDDCADNAIPLPNVDSKTLALVIEYCNKHVHAAADDSAAAETSNASS-AGGS 85
Query: 57 IDDDLKAWDADLVKVD 72
+ DLK WDA+ VKV+
Sbjct: 86 GEVDLKKWDAEFVKVE 101
>gi|18418454|ref|NP_567967.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75099553|sp|O65674.1|ASK12_ARATH RecName: Full=SKP1-like protein 12; Short=AtSK12
gi|3096916|emb|CAA18826.1| Skp1p-like protein [Arabidopsis thaliana]
gi|7270397|emb|CAB80164.1| Skp1p-like protein [Arabidopsis thaliana]
gi|332660983|gb|AEE86383.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 152
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 22/80 (27%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DE 45
+L SSDG+ FE HM+EDDC D IPL NV KI K I+YC K+ DE
Sbjct: 7 VLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVDE 66
Query: 46 ASMFDDLATTSIDDDLKAWD 65
A+ ++DL WD
Sbjct: 67 ANPIS-------EEDLNKWD 79
>gi|11994756|dbj|BAB03085.1| kinetechore (Skp1p-like) protein-like [Arabidopsis thaliana]
Length = 177
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 23/92 (25%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---- 43
+L SSDGE F+ H++EDDC ++ IPL NVT I ++YC KH
Sbjct: 7 VLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDV 66
Query: 44 -----DEASMFDDLATTSIDDDLKAWDADLVK 70
E DD A+ +L AWDA+ +K
Sbjct: 67 VDDDASEEPKGDD-ASEEAKQNLDAWDAEFMK 97
>gi|414881567|tpg|DAA58698.1| TPA: SKP1-like protein 1A [Zea mays]
Length = 168
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------- 59
E+ MIEDDCA IPLPNV K IKYCNKH A+ D A +
Sbjct: 27 SEIIRFMIEDDCADSAIPLPNVDSKTLALVIKYCNKHVHAAADDSAAAETSSSASSAGGG 86
Query: 60 ---DLKAWDADLVKVD 72
DLK WDA+ VKVD
Sbjct: 87 GEVDLKKWDAEFVKVD 102
>gi|357470463|ref|XP_003605516.1| SKP1-like protein [Medicago truncatula]
gi|355506571|gb|AES87713.1| SKP1-like protein [Medicago truncatula]
Length = 153
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 23/86 (26%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEA 46
+LKS +GE FE +I+DDCA D IP+ NVT KI I+YC KH
Sbjct: 10 ILKSYEGETFEIEEAVAMQSQTIKLLIDDDCANDTGIPISNVTSKILAMVIEYCKKH--- 66
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
DD+++ D+L+ WDA+ V+VD
Sbjct: 67 --ADDVSS----DELRKWDAEFVQVD 86
>gi|224138352|ref|XP_002326581.1| predicted protein [Populus trichocarpa]
gi|222833903|gb|EEE72380.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 22/86 (25%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR--IPLPNVTIKIFYKAIKYCNKHDEA 46
L+SSDGE FE HMIE+ + ++ I LP V+ I K ++YC KH E
Sbjct: 7 LRSSDGETFEVEEAVALQSKTIKHMIEESSSSNQEVITLPIVSGNILAKVLQYCEKHIE- 65
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
DD +T +L WDAD VK+D
Sbjct: 66 ---DDRSTAK---ELSTWDADFVKLD 85
>gi|115478296|ref|NP_001062743.1| Os09g0273800 [Oryza sativa Japonica Group]
gi|49388741|dbj|BAD25941.1| putative SKP1 [Oryza sativa Japonica Group]
gi|113630976|dbj|BAF24657.1| Os09g0273800 [Oryza sativa Japonica Group]
gi|125604970|gb|EAZ44006.1| hypothetical protein OsJ_28630 [Oryza sativa Japonica Group]
gi|215765998|dbj|BAG98226.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 167
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDG+ F+ +MIEDDC + +PLPNV + K + YC KH A+
Sbjct: 16 LLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHAAAA 75
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
D +LK++DA + VD
Sbjct: 76 AAAAEDVAVKDQELKSFDASFIDVD 100
>gi|159465507|ref|XP_001690964.1| E3 ubiquitin ligase [Chlamydomonas reinhardtii]
gi|158279650|gb|EDP05410.1| E3 ubiquitin ligase [Chlamydomonas reinhardtii]
Length = 157
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSD ++FE +++ED D IPLPNV+ +I K I+Y H EA
Sbjct: 7 LMSSDAQMFEVDEDVAFQSQTVKNLVEDAGTEDAIPLPNVSGRILAKVIEYSKYHVEAEK 66
Query: 49 FD-DLATTSIDDDLKAWDADLVKVD 72
D T +DD+K WD + VKVD
Sbjct: 67 KGADDKPTKTEDDVKRWDDEFVKVD 91
>gi|289526841|pdb|3L2O|A Chain A, Structure-Based Mechanism Of Dimerization-Dependent
Ubiquitination By The Scffbx4 Ubiquitin Ligase
Length = 149
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 18/83 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF 49
L+SSDGE+FE +E +D +D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHK----- 60
Query: 50 DDLATTSIDDDLKAWDADLVKVD 72
DD + DD+ WD + +KVD
Sbjct: 61 DDPGGSGT-DDIPVWDQEFLKVD 82
>gi|11513316|pdb|1FQV|B Chain B, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513318|pdb|1FQV|D Chain D, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513320|pdb|1FQV|F Chain F, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513322|pdb|1FQV|H Chain H, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513324|pdb|1FQV|J Chain J, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513326|pdb|1FQV|L Chain L, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513328|pdb|1FQV|N Chain N, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513330|pdb|1FQV|P Chain P, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|146387058|pdb|2OVP|A Chain A, Structure Of The Skp1-Fbw7 Complex
gi|146387060|pdb|2OVQ|A Chain A, Structure Of The Skp1-Fbw7-Cyclinedegc Complex
gi|146387063|pdb|2OVR|A Chain A, Structure Of The Skp1-Fbw7-Cyclinedegn Complex
Length = 149
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 18/83 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF 49
L+SSDGE+FE +E +D +D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHK----- 60
Query: 50 DDLATTSIDDDLKAWDADLVKVD 72
DD + DD+ WD + +KVD
Sbjct: 61 DDPGGSGT-DDIPVWDQEFLKVD 82
>gi|302832616|ref|XP_002947872.1| hypothetical protein VOLCADRAFT_73445 [Volvox carteri f.
nagariensis]
gi|300266674|gb|EFJ50860.1| hypothetical protein VOLCADRAFT_73445 [Volvox carteri f.
nagariensis]
Length = 158
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSD ++FE +++ED D IPLPNV+ +I K I+YC H EA
Sbjct: 8 LMSSDTQMFEVDEEAAFQSQTVKNLVEDAGTDDAIPLPNVSGRILAKVIEYCKYHVEAEK 67
Query: 49 FD-DLATTSIDDDLKAWDADLVKVD 72
D +D++K WD + VKVD
Sbjct: 68 KGADDKPMKTEDEVKRWDEEFVKVD 92
>gi|47680276|gb|AAT37113.1| skp1-like protein [Oryza sativa Japonica Group]
Length = 166
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 4 SSDGEVFE-------------HMIEDDCAVDR---IPLPNVTIKIFYKAIKYCNKHDEAS 47
SSDGE FE HMIED C D I LPNV K I+YC KH A+
Sbjct: 17 SSDGEAFEMTEAAASMSRILLHMIEDGCTGDGGAGITLPNVAGSALAKVIEYCTKHAIAA 76
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
++ ++LK +D + ++V
Sbjct: 77 AEGSSSSRKAKEELKKFDVEFMEVG 101
>gi|115466000|ref|NP_001056599.1| Os06g0113800 [Oryza sativa Japonica Group]
gi|7248399|dbj|BAA92722.1| putative SKP1 [Oryza sativa Japonica Group]
gi|113594639|dbj|BAF18513.1| Os06g0113800 [Oryza sativa Japonica Group]
gi|125553791|gb|EAY99396.1| hypothetical protein OsI_21366 [Oryza sativa Indica Group]
gi|125595813|gb|EAZ35593.1| hypothetical protein OsJ_19880 [Oryza sativa Japonica Group]
Length = 166
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 4 SSDGEVFE-------------HMIEDDCAVDR---IPLPNVTIKIFYKAIKYCNKHDEAS 47
SSDGE FE HMIED C D I LPNV K I+YC KH A+
Sbjct: 17 SSDGEAFEMTEAAASMSRILLHMIEDGCTGDGGAGITLPNVAGSALAKVIEYCTKHAIAA 76
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
++ ++LK +D + ++V
Sbjct: 77 AEGSSSSRKAKEELKKFDVEFMEVG 101
>gi|297814620|ref|XP_002875193.1| hypothetical protein ARALYDRAFT_904587 [Arabidopsis lyrata subsp.
lyrata]
gi|297321031|gb|EFH51452.1| hypothetical protein ARALYDRAFT_904587 [Arabidopsis lyrata subsp.
lyrata]
Length = 199
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 13/56 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
+L SSDGE F+ HM+EDDC ++ IPL NVT K ++YC KH
Sbjct: 7 VLTSSDGESFQVEEVVARKLQIVGHMLEDDCVINAIPLQNVTGKTLSMVLEYCKKH 62
>gi|125563010|gb|EAZ08390.1| hypothetical protein OsI_30650 [Oryza sativa Indica Group]
Length = 168
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDG+ F+ +MIEDDC + +P+PNV + K + YC KH A+
Sbjct: 16 LLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPVPNVASNVLAKVLDYCKKHAAAA 75
Query: 48 MFDDLATTSI-DDDLKAWDADLVKVD 72
++ D +LK++DA + VD
Sbjct: 76 AAAAAEDVAVKDQELKSFDASFIDVD 101
>gi|18404608|ref|NP_566773.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|238055345|sp|Q1PEL7.2|ASK15_ARATH RecName: Full=SKP1-like protein 15; Short=AtSK15
gi|332643525|gb|AEE77046.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 177
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 21/91 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE F+ H++EDDC ++ IPL NVT I ++YC KH +
Sbjct: 7 VLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDV 66
Query: 48 MF----DDLATTSIDDDLK----AWDADLVK 70
+ ++ DD+ K AWDA+ +K
Sbjct: 67 VDDDASEEPKKKKPDDEAKQNLDAWDAEFMK 97
>gi|357140408|ref|XP_003571760.1| PREDICTED: SKP1-like protein 4-like [Brachypodium distachyon]
Length = 167
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 14/56 (25%)
Query: 2 LKSSDGEVFEH--------------MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDG FE M+EDDCA IPLP VT +I + I YCNKH
Sbjct: 12 LESSDGHKFEVKEAIMAAASGTIRIMVEDDCAGGVIPLPQVTGRILSRVIDYCNKH 67
>gi|391334157|ref|XP_003741474.1| PREDICTED: S-phase kinase-associated protein 1-like [Metaseiulus
occidentalis]
Length = 162
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGEVFE +E +D +D +PLPNVT I K I++ H
Sbjct: 6 LQSSDGEVFEVDVEIAKASVTIKTMLEDLGMDEDDDEPVPLPNVTATILRKVIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D +D DD+ +WDAD +KVD
Sbjct: 66 DDPPPQEEDETKEKRTDDIPSWDADFLKVD 95
>gi|49387822|dbj|BAD26415.1| putative SKP1 [Oryza sativa Japonica Group]
gi|49388750|dbj|BAD25950.1| putative SKP1 [Oryza sativa Japonica Group]
gi|125563014|gb|EAZ08394.1| hypothetical protein OsI_30654 [Oryza sativa Indica Group]
gi|125604975|gb|EAZ44011.1| hypothetical protein OsJ_28635 [Oryza sativa Japonica Group]
Length = 172
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKH-DE 45
+L SSDG FE +MIEDDCA + IPL NV I K ++YCNKH
Sbjct: 19 LLISSDGAKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVASDILAKVVEYCNKHAAA 78
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ A S +++L +DA+ V VD
Sbjct: 79 TATATAAAKASGEEELSKFDAEFVSVD 105
>gi|357479509|ref|XP_003610040.1| Skp1-like protein [Medicago truncatula]
gi|355511095|gb|AES92237.1| Skp1-like protein [Medicago truncatula]
Length = 125
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVK 70
+ IP+PN T KI K I+YC KH E AT+S +D K WDAD +K
Sbjct: 28 NGIPVPNATSKILTKVIEYCKKHVE-------ATSSTSEDHKVWDADFIK 70
>gi|384253562|gb|EIE27036.1| E3 ubiquitin ligase SCF complex, Skp subunit [Coccomyxa
subellipsoidea C-169]
Length = 158
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 7 GEVFEHMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDEASMFD-DLATTSIDDDLKAW 64
E ++ +E+ D ++PLPNV KI K ++YCN H +AS + D ++++K W
Sbjct: 25 SETVKNTLEETGGEDTKVPLPNVHSKILSKVLEYCNFHVDASKKNTDDKPAKTEEEVKTW 84
Query: 65 DADLVKVD 72
D+D VKVD
Sbjct: 85 DSDFVKVD 92
>gi|388501392|gb|AFK38762.1| unknown [Lotus japonicus]
Length = 93
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 22/83 (26%)
Query: 2 LKSSDGEVFE----------HMIED--DCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF 49
LKSSDG FE I+D + + L +VT I K I+YCNKH S
Sbjct: 10 LKSSDGAAFEVEEAVVALHSQTIKDMINAHSGIVALSDVTGNILAKVIQYCNKHSSGS-- 67
Query: 50 DDLATTSIDDDLKAWDADLVKVD 72
+++L+ WDAD VKVD
Sbjct: 68 --------ENELRQWDADFVKVD 82
>gi|294905724|ref|XP_002777664.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|239885555|gb|EER09480.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
Length = 164
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEA-- 46
L+SS GEVFE +M+ED + IPLPNV I K I+YC H E
Sbjct: 10 LRSSQGEVFEVESTVACMSNLIQNMVEDGGVDEEIPLPNVKTAILAKVIEYCKHHKENPP 69
Query: 47 -SMFDDLATTSIDD-DLKAWDADLVKVD 72
+ L +TS+ + + WD + V ++
Sbjct: 70 DEITKPLKSTSLAECGVSDWDCEFVNIE 97
>gi|222641563|gb|EEE69695.1| hypothetical protein OsJ_29339 [Oryza sativa Japonica Group]
Length = 722
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 17/85 (20%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDG+ FE +M+ED+C + +PLPNV + K ++YC++H A+
Sbjct: 575 LLISSDGQRFEVAQAVASMSRLVRNMVEDECTDNGVPLPNVPSAVLAKVLEYCSEHAAAA 634
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
++LK++DA ++VD
Sbjct: 635 AAAGEEV----EELKSFDAAFIEVD 655
>gi|18403167|ref|NP_566692.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75335427|sp|Q9LSY1.1|ASK8_ARATH RecName: Full=SKP1-like protein 8; Short=AtSK8
gi|11994650|dbj|BAB02845.1| kinetechore (Skp1p-like) protein-like [Arabidopsis thaliana]
gi|67633650|gb|AAY78749.1| putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK
[Arabidopsis thaliana]
gi|332643035|gb|AEE76556.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 152
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 18/85 (21%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
MLKSS+G+ FE HMIE +C + I + +T +I I+YCNKH
Sbjct: 7 MLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKH---- 62
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
D A DDDL+ WD + ++ D
Sbjct: 63 -HVDAANPCSDDDLEKWDKEFMEKD 86
>gi|294869076|ref|XP_002765750.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|294878004|ref|XP_002768235.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|239865913|gb|EEQ98467.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|239870432|gb|EER00953.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
Length = 164
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS- 47
L+SS GEVFE +M+ED + IPLPNV I K I+YC H E
Sbjct: 10 LRSSQGEVFEVESAVACMSNLIQNMVEDGGVDEEIPLPNVKTAILAKVIEYCKHHKENPP 69
Query: 48 --MFDDLATTSIDD-DLKAWDADLVKVD 72
+ L +TS+ + + WD + V ++
Sbjct: 70 DEITKPLKSTSLAECGVSDWDCEFVNIE 97
>gi|91806481|gb|ABE65968.1| Skp1 family protein [Arabidopsis thaliana]
Length = 112
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 13/56 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
+L SSDGE F+ H++EDDC ++ IPL NVT I ++YC KH
Sbjct: 7 VLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKH 62
>gi|23495757|dbj|BAC19968.1| putative Skp1 [Oryza sativa Japonica Group]
gi|50509624|dbj|BAD31468.1| putative Skp1 [Oryza sativa Japonica Group]
gi|125557222|gb|EAZ02758.1| hypothetical protein OsI_24878 [Oryza sativa Indica Group]
Length = 157
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 13/56 (23%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
+L SSDGE F +MIE+DC + +PLPNV K+ K I+YC KH
Sbjct: 14 LLISSDGEHFNVPSAAASLSQLVSNMIENDCTTNGVPLPNVASKVLAKVIEYCVKH 69
>gi|33357847|pdb|1P22|B Chain B, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex:
Destruction Motif Binding And Lysine Specificity On The
Scfbeta-Trcp1 Ubiquitin Ligase
Length = 145
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 22/83 (26%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF 49
L+SSDGE+FE +E +D +D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHK----- 60
Query: 50 DDLATTSIDDDLKAWDADLVKVD 72
DD DD+ WD + +KVD
Sbjct: 61 DDPP-----DDIPVWDQEFLKVD 78
>gi|297843828|ref|XP_002889795.1| hypothetical protein ARALYDRAFT_471136 [Arabidopsis lyrata subsp.
lyrata]
gi|297335637|gb|EFH66054.1| hypothetical protein ARALYDRAFT_471136 [Arabidopsis lyrata subsp.
lyrata]
Length = 172
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 30/56 (53%), Gaps = 13/56 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
+L SSDGE FE HMIEDDCA IP+ NVT I K I+Y KH
Sbjct: 23 LLTSSDGESFEIDEAVARKFQIIAHMIEDDCAGKAIPIDNVTGDILSKIIEYAKKH 78
>gi|241872562|gb|ACS69066.1| pollen specific SKP1-like protein LSK2 [Lilium longiflorum]
Length = 157
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 16/84 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SSDG F+ ++I+D C D IP+ NV ++ K ++YCNKH
Sbjct: 11 LRSSDGAEFQITEAAAMLSTTIKNLIDDGCKKDVIPIHNVEGEVLAKVLEYCNKHQYVID 70
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+D A + +L+ WD +KVD
Sbjct: 71 VNDKAKVA---ELRKWDRKFIKVD 91
>gi|357469265|ref|XP_003604917.1| SKP1-like protein [Medicago truncatula]
gi|355505972|gb|AES87114.1| SKP1-like protein [Medicago truncatula]
Length = 156
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 2 LKSSDGEVFE---------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDEASMFDD 51
+KSSDGE FE + D A D I +P++ K K I+YC KH EA+ D+
Sbjct: 12 MKSSDGETFEIEEVVFQSIKNLTDGAANDTEILVPHIPGKFLAKVIEYCKKHVEAASSDE 71
Query: 52 LATTSIDDDLKAWDADLVKVD 72
DD+L WD + VKVD
Sbjct: 72 ---KLFDDELNKWDTEFVKVD 89
>gi|426263316|emb|CCG34078.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 161
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDE--ASMFDDLATTSIDDDLKAW 64
E +++IED IPLPNVT KI K ++YC H E ++ +D DD+ W
Sbjct: 27 SETIKNLIEDAGVDAPIPLPNVTGKILAKVVEYCKYHTEHPTAVSEDKKDEKRTDDIIGW 86
Query: 65 DADLVKVD 72
D D KVD
Sbjct: 87 DLDFCKVD 94
>gi|253796258|gb|ACT35733.1| SLF-interacting SKP1 [Petunia x hybrida]
gi|253796260|gb|ACT35734.1| SLF-interacting SKP1 [Petunia x hybrida]
Length = 179
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 19/80 (23%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---------------DEASMFDD 51
E+ ++MIEDDCA IPLPN+ K K I+Y NKH D+ D
Sbjct: 28 SEMLKNMIEDDCASSVIPLPNIDSKTLSKVIEYLNKHITRDEDEDEEQEEGKDKGKEVD- 86
Query: 52 LATTSIDDDLKAWDADLVKV 71
T +DDLK +D V V
Sbjct: 87 ---TGEEDDLKEFDEQFVNV 103
>gi|21466064|pdb|1LDK|D Chain D, Structure Of The Cul1-Rbx1-Skp1-F Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 133
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF 49
L+SSDGE+FE +E +D +D +PLPNV I K I++C H +
Sbjct: 5 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPP 64
Query: 50 DDLATT--SIDDDLKAWDADLVKVD 72
+ DD+ WD + +KVD
Sbjct: 65 PEDDENKEKRTDDIPVWDQEFLKVD 89
>gi|11513333|pdb|1FS1|B Chain B, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513335|pdb|1FS1|D Chain D, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513338|pdb|1FS2|B Chain B, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
gi|11513340|pdb|1FS2|D Chain D, Insights Into Scf Ubiquitin Ligases From The Structure
Of The Skp1-Skp2 Complex
Length = 141
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMF 49
L+SSDGE+FE +E +D +D +PLPNV I K I++C H +
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPP 65
Query: 50 DDLATT--SIDDDLKAWDADLVKVD 72
+ DD+ WD + +KVD
Sbjct: 66 PEDDENKEKRTDDIPVWDQEFLKVD 90
>gi|294869078|ref|XP_002765751.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|294878006|ref|XP_002768236.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|239865914|gb|EEQ98468.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|239870433|gb|EER00954.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
Length = 169
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 19/89 (21%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SS GEVF ++M+ED + IPLPNV I K I+YC KH E++
Sbjct: 15 LRSSQGEVFDVPTNVACMSNLIQNMVEDGGVDEEIPLPNVKTAILAKVIEYC-KHHESNP 73
Query: 49 FDDL-----ATTSIDDDLKAWDADLVKVD 72
D++ +T + + WD D V ++
Sbjct: 74 PDEISKPLKSTNLAECGVSDWDCDYVNIE 102
>gi|332308980|gb|AEE39461.1| SLF-interacting SKP1-like protein 1 [Petunia integrifolia subsp.
inflata]
Length = 179
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
E+ ++MIEDDCA IPLPN+ K K I+Y NKH
Sbjct: 28 SEMLKNMIEDDCASSVIPLPNIDSKTLSKVIEYLNKH 64
>gi|297814624|ref|XP_002875195.1| hypothetical protein ARALYDRAFT_484224 [Arabidopsis lyrata subsp.
lyrata]
gi|297321033|gb|EFH51454.1| hypothetical protein ARALYDRAFT_484224 [Arabidopsis lyrata subsp.
lyrata]
Length = 168
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 20/90 (22%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSD E FE HMI+DDCA IPL NVT KI I+YC KH
Sbjct: 7 VLTSSDDESFEVDEAVARKLQIIAHMIDDDCADKAIPLQNVTGKILAVVIEYCKKHVNDV 66
Query: 48 MFDDLA---TTSIDDDLK----AWDADLVK 70
D+ + ++D++ K WDA+ +K
Sbjct: 67 DDSDVVEEISENVDEEAKKELVTWDAEFMK 96
>gi|357492645|ref|XP_003616611.1| SKP1-like protein [Medicago truncatula]
gi|355517946|gb|AES99569.1| SKP1-like protein [Medicago truncatula]
Length = 145
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 41/82 (50%), Gaps = 17/82 (20%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRI-PLPNVTIKIFYKAIKYCNKHDEAS 47
LKSSDG F+ H+IEDDC D PL VT I K I+YC KH EA
Sbjct: 9 LKSSDGGTFKIDKAVALESQTLKHIIEDDCIHDNGNPLIKVTSNILAKVIEYCKKHVEAG 68
Query: 48 MFDDLATTSIDDDLKAWDADLV 69
++ + DDLKA DL+
Sbjct: 69 SSEE---KPLHDDLKATLLDLI 87
>gi|23495758|dbj|BAC19969.1| putative kinetochore protein [Oryza sativa Japonica Group]
gi|50509625|dbj|BAD31469.1| putative kinetochore protein [Oryza sativa Japonica Group]
gi|125557223|gb|EAZ02759.1| hypothetical protein OsI_24879 [Oryza sativa Indica Group]
gi|125599103|gb|EAZ38679.1| hypothetical protein OsJ_23074 [Oryza sativa Japonica Group]
Length = 172
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 4 SSDGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDL 61
+S ++ +MIEDDC + + LPNV I + YCN H D A+ D + +S +++L
Sbjct: 34 ASQSQLISNMIEDDCTENGVRLPNVDGDILTMVVDYCNMHAGDAAAAGDTMKASSTEEEL 93
Query: 62 KAWDADLVK 70
K +DA+LV+
Sbjct: 94 KKFDAELVQ 102
>gi|18391128|ref|NP_563864.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|4914325|gb|AAD32873.1|AC005489_11 F14N23.11 [Arabidopsis thaliana]
gi|27754385|gb|AAO22641.1| putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At18)
[Arabidopsis thaliana]
gi|28394095|gb|AAO42455.1| putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At18)
[Arabidopsis thaliana]
gi|332190436|gb|AEE28557.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 183
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 16/84 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEA 46
+L SSDGE FE HM+ED+CA + IPL NVT I K I+Y H +E
Sbjct: 32 LLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEP 91
Query: 47 SMFDDLATTSIDDDLKAWDADLVK 70
S D+ +L +WDA ++
Sbjct: 92 SEEDEDEEAK--KNLDSWDAKFME 113
>gi|307177637|gb|EFN66695.1| S-phase kinase-associated protein 1 [Camponotus floridanus]
Length = 184
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE+F IE +D +D +PLPNV I K I++ H
Sbjct: 6 LQSSDGEIFAVDIEIIKCSVTIKTMLEDLGIDEAEEEVVPLPNVNSAILNKIIQWATYHK 65
Query: 45 E---ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ F+D A + +DD+ +WDAD +KV+
Sbjct: 66 DDLPPPSFEDEAEENSNDDISSWDADFLKVE 96
>gi|2673872|emb|CAA75119.1| fimbriata-associated protein [Antirrhinum majus]
Length = 119
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDD-LKAWDADLVKVD 72
IP+PNVT KI K I+YC +H EA+ D D D LK +DA+ VKVD
Sbjct: 3 IPVPNVTSKILAKVIEYCKRHVEAAAKTDADDGQGDRDALKVFDAEFVKVD 53
>gi|18395500|ref|NP_565297.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75100058|sp|O81055.1|ASK16_ARATH RecName: Full=SKP1-like protein 16; Short=AtSK16
gi|3548811|gb|AAC34483.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At16),
putative [Arabidopsis thaliana]
gi|50253480|gb|AAT71942.1| At2g03190 [Arabidopsis thaliana]
gi|52421309|gb|AAU45224.1| At2g03190 [Arabidopsis thaliana]
gi|330250579|gb|AEC05673.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 170
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---- 43
+L SSD E FE HMI+DDCA IPL NVT I I+YC KH
Sbjct: 7 VLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDD 66
Query: 44 -----DEASMFDDLATTSIDDDLKAWDADLVK 70
D + ++L+ WDA+ +K
Sbjct: 67 VDDSDDSTEATSENVNEEAKNELRTWDAEFMK 98
>gi|40253354|dbj|BAD05286.1| putative SKP1 [Oryza sativa Japonica Group]
gi|125603222|gb|EAZ42547.1| hypothetical protein OsJ_27113 [Oryza sativa Japonica Group]
Length = 169
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 22/92 (23%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSDGE FE HMIEDDC + +PLPNVT + K ++Y KH A+
Sbjct: 13 LLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLVKVVEYFKKH--AA 70
Query: 48 MFDDLATTSI-------DDDLKAWDADLVKVD 72
+ AT ++ +++LK++DA+ V VD
Sbjct: 71 VTPKPATEAVVADKAKREEELKSFDAEFVDVD 102
>gi|426224001|ref|XP_004006162.1| PREDICTED: S-phase kinase-associated protein 1-like [Ovis aries]
Length = 163
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVD------RIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E +D +D +PLPNV I KAI++C H
Sbjct: 6 LESSDGEIFEVDVEIAQQSVTIKTVLEDLGMDDEGDDGPVPLPNVNAAILKKAIQWCTHH 65
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D D+ DD+ AWD + +KVD
Sbjct: 66 KDDPLPPEDEENKEKRTDDILAWDQEFLKVD 96
>gi|238055343|sp|Q9SY65.2|ASK18_ARATH RecName: Full=SKP1-like protein 18; Short=AtSK18
Length = 158
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 16/84 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEA 46
+L SSDGE FE HM+ED+CA + IPL NVT I K I+Y H +E
Sbjct: 7 LLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEP 66
Query: 47 SMFDDLATTSIDDDLKAWDADLVK 70
S D+ +L +WDA ++
Sbjct: 67 SEEDEDEEAK--KNLDSWDAKFME 88
>gi|21555166|gb|AAM63794.1| SKP1/ASK1 (At18), putative [Arabidopsis thaliana]
Length = 158
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 16/84 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEA 46
+L SSDGE FE HM+ED+CA + IPL NVT I K I+Y H +E
Sbjct: 7 LLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEP 66
Query: 47 SMFDDLATTSIDDDLKAWDADLVK 70
S D+ +L +WDA ++
Sbjct: 67 SEEDEDEEAK--KNLDSWDAKFME 88
>gi|303288618|ref|XP_003063597.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454665|gb|EEH51970.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 155
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWD 65
+ E ++MIED IPLPNV+ KI K I+YC H + + +D+ K +D
Sbjct: 28 ESETIKNMIEDTGVDAPIPLPNVSSKILAKVIEYCKYH-----VGGKKSETSEDEQKTFD 82
Query: 66 ADLVKVD 72
++ VKVD
Sbjct: 83 SEFVKVD 89
>gi|357480267|ref|XP_003610419.1| SKP1-like protein [Medicago truncatula]
gi|355511474|gb|AES92616.1| SKP1-like protein [Medicago truncatula]
Length = 146
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 21/83 (25%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDEAS 47
LKSSDG+ FE HMI+ + D I + NV KI K I+YC KH E
Sbjct: 9 LKSSDGKTFEVYEDVALESQTIKHMIKKNSGSDNEIVILNVKGKILTKVIEYCKKHVE-- 66
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
DDLKAWDA+ +K
Sbjct: 67 -----EVKKRVDDLKAWDAEFMK 84
>gi|307105792|gb|EFN54040.1| hypothetical protein CHLNCDRAFT_59724 [Chlorella variabilis]
Length = 157
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 12 HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTS-IDDDLKAWDADLVK 70
+ IE+ + + IP+PNV KI K I+YC+ H A D+ T +D++KA+DA+ K
Sbjct: 30 NTIEEIGSDEVIPVPNVNSKILSKVIEYCSFHVAAEKKDEHGKTGKTEDEIKAFDAEFTK 89
Query: 71 VD 72
VD
Sbjct: 90 VD 91
>gi|157120868|ref|XP_001653700.1| skp1 [Aedes aegypti]
gi|157120870|ref|XP_001653701.1| skp1 [Aedes aegypti]
gi|170048269|ref|XP_001851731.1| S-phase kinase-associated protein 1A [Culex quinquefasciatus]
gi|108874781|gb|EAT39006.1| AAEL009160-PB [Aedes aegypti]
gi|108874782|gb|EAT39007.1| AAEL009160-PA [Aedes aegypti]
gi|167870384|gb|EDS33767.1| S-phase kinase-associated protein 1A [Culex quinquefasciatus]
Length = 162
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGEVF+ ++ +D +D +PLPNV I K +++ H
Sbjct: 6 LQSSDGEVFDTDVQIAKCSGTIKTMLEDLGMDEGEDEVVPLPNVNSAILRKVLQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D A DD DD+ +WDAD +KVD
Sbjct: 66 DDPAPAEDDENKEKRTDDISSWDADFLKVD 95
>gi|297832120|ref|XP_002883942.1| hypothetical protein ARALYDRAFT_899849 [Arabidopsis lyrata subsp.
lyrata]
gi|297329782|gb|EFH60201.1| hypothetical protein ARALYDRAFT_899849 [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 18/83 (21%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSD E FE HMI++DCA I L NVT KI I+YC KH
Sbjct: 7 VLTSSDDESFEVDEAVARKSQIIAHMIDEDCADKAILLQNVTGKILAIIIEYCKKH---- 62
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
DD+ + + ++ + WDA+ +K
Sbjct: 63 -VDDVDSEAKNELVMTWDAEFMK 84
>gi|18399260|ref|NP_565467.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
gi|75266020|sp|Q9SL65.1|ASK17_ARATH RecName: Full=SKP1-like protein 17; Short=AtSK17; AltName:
Full=Protein MEIDOS
gi|4580458|gb|AAD24382.1| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At17),
putative [Arabidopsis thaliana]
gi|330251879|gb|AEC06973.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
Length = 150
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 21/83 (25%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
+L SSD E FE HMI+DDCA I L NVT KI I+YC KH
Sbjct: 7 VLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKH---- 62
Query: 48 MFDDLATTSIDDDLKAWDADLVK 70
DD+ ++ WDA+ VK
Sbjct: 63 -VDDVEAK---NEFVTWDAEFVK 81
>gi|170031135|ref|XP_001843442.1| S-phase kinase-associated protein 1A [Culex quinquefasciatus]
gi|167869218|gb|EDS32601.1| S-phase kinase-associated protein 1A [Culex quinquefasciatus]
Length = 165
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 22/93 (23%)
Query: 2 LKSSDGEVF-------------EHMIED------DCAVDRIPLPNVTIKIFYKAIKYCNK 42
++SSDGEVF + M+ED D D IPLPNV I K +++ N
Sbjct: 6 MQSSDGEVFDTELQVAKCSGTIKTMLEDLGIEGGDGEEDVIPLPNVNSAILRKVLQWANY 65
Query: 43 HDE---ASMFDDLATTSIDDDLKAWDADLVKVD 72
H + + +D DD+ +WDAD +KVD
Sbjct: 66 HKDDPVPATDEDETKEKRTDDISSWDADFLKVD 98
>gi|170074491|ref|XP_001870584.1| S-phase kinase-associated protein 1A [Culex quinquefasciatus]
gi|167871322|gb|EDS34705.1| S-phase kinase-associated protein 1A [Culex quinquefasciatus]
Length = 160
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 22/93 (23%)
Query: 2 LKSSDGEVF-------------EHMIED------DCAVDRIPLPNVTIKIFYKAIKYCNK 42
++SSDGEVF + M+ED D D IPLPNV I K +++ N
Sbjct: 1 MQSSDGEVFDTELQVAKCSGTIKTMLEDLGIEGGDGEEDVIPLPNVNSAILRKVLQWANY 60
Query: 43 HDE---ASMFDDLATTSIDDDLKAWDADLVKVD 72
H + + +D DD+ +WDAD +KVD
Sbjct: 61 HKDDPVPATDEDETKEKRTDDISSWDADFLKVD 93
>gi|339254132|ref|XP_003372289.1| Skp1 family, dimerization domain protein [Trichinella spiralis]
gi|316967331|gb|EFV51766.1| Skp1 family, dimerization domain protein [Trichinella spiralis]
Length = 202
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 20/89 (22%)
Query: 4 SSDGEVFE-------------HMIEDDCA------VDRIPLPNVTIKIFYKAIKYCNKH- 43
SSDGE FE M+ED C ++ IPLPNV I K + YC H
Sbjct: 48 SSDGEAFEVDSKAIKLSKTVKTMLEDLCTDEGKAELEPIPLPNVNSTILKKILLYCEHHK 107
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D+ ++ + DD+ +WD++ +KVD
Sbjct: 108 DDVAVCESEEGDRRSDDISSWDSEFLKVD 136
>gi|225710386|gb|ACO11039.1| S-phase kinase-associated protein 1 [Caligus rogercresseyi]
gi|225710690|gb|ACO11191.1| S-phase kinase-associated protein 1 [Caligus rogercresseyi]
gi|225714348|gb|ACO13020.1| S-phase kinase-associated protein 1 [Lepeophtheirus salmonis]
gi|225719430|gb|ACO15561.1| S-phase kinase-associated protein 1 [Caligus clemensi]
gi|290561056|gb|ADD37930.1| S-phase kinase-associated protein 1 [Lepeophtheirus salmonis]
Length = 162
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+F + M+ED D + +PLPNV I K I++ H
Sbjct: 6 LQSSDGEIFTVDTEIAKQSVTIKTMLEDLGMEDEEEEVVPLPNVNAAILRKTIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPIQEDDENKEKRTDDISSWDADFLKVD 95
>gi|225710922|gb|ACO11307.1| S-phase kinase-associated protein 1 [Caligus rogercresseyi]
Length = 162
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+F + M+ED D + +PLPNV I K I++ H
Sbjct: 6 LQSSDGEIFTVDTEIAKQSVTIKTMLEDLGMEDEEEEVVPLPNVNAAILRKTIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPIQEDDENKEKRTDDISSWDADFLKVD 95
>gi|320164147|gb|EFW41046.1| SCF ubiquitin ligase complex [Capsaspora owczarzaki ATCC 30864]
Length = 160
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 2 LKSSDG-------------EVFEHMIEDDCAVD--RIPLPNVTIKIFYKAIKYCNKH--D 44
L+SSDG E ++M+ED D IPLPNVT I K I+YC H D
Sbjct: 6 LQSSDGRDFSVDAKAAKMSETIKNMLEDLGGDDDMAIPLPNVTGAILEKVIQYCLHHKDD 65
Query: 45 EASMFDDLATTSIDDDLKAWDADLVKVD 72
A +D +D+ +WDAD +VD
Sbjct: 66 VAKPEEDETKAKKQEDIDSWDADFCRVD 93
>gi|294907684|ref|XP_002777755.1| S-phase kinase-associated protein 1A, putative [Perkinsus marinus
ATCC 50983]
gi|239885660|gb|EER09550.1| S-phase kinase-associated protein 1A, putative [Perkinsus marinus
ATCC 50983]
Length = 169
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SS GEVF ++M+ED + IPLPNV I K I+YC KH E++
Sbjct: 15 LRSSQGEVFDVPTNVACMSNLIQNMVEDGGVDEEIPLPNVKTAILAKVIEYC-KHHESNP 73
Query: 49 FDDL-----ATTSIDDDLKAWDADLVKVD 72
D++ +T + + WD V ++
Sbjct: 74 PDEISKPLKSTNLAECGVSDWDCGYVNIE 102
>gi|290462007|gb|ADD24051.1| S-phase kinase-associated protein 1 [Lepeophtheirus salmonis]
Length = 162
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+F + M+ED D + +PLPNV I K I++ H
Sbjct: 6 LQSSDGEIFTVDAEIAKQSVTIKTMLEDLGMEDEEEEVVPLPNVNAAILRKTIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPIQEDDENKEKRTDDISSWDADFLKVD 95
>gi|225711132|gb|ACO11412.1| S-phase kinase-associated protein 1 [Caligus rogercresseyi]
Length = 162
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+F + M+ED D + +PLPNV I K I++ H
Sbjct: 6 LQSSDGEIFTVDTEIAKQSVTIKTMLEDLGMEDEEEEVVPLPNVNAAILRKTIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPIQEDDENKEKRTDDISSWDADFLKVD 95
>gi|9082295|gb|AAF82795.1|AF274864_1 SKP1gamma1 protein [Brassica napus]
Length = 159
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SS+GE FE HM+ED C+ IP+ V I K I+YC KH E
Sbjct: 10 LISSEGEAFEVSEAVAREFEIVAHMLEDGCSGSSIPITTVDSNILGKVIEYCTKHVEVGN 69
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+ + + + DL+ +D + V+
Sbjct: 70 VEGNSEKA-EKDLEEFDKRFIAVE 92
>gi|297816600|ref|XP_002876183.1| hypothetical protein ARALYDRAFT_906689 [Arabidopsis lyrata subsp.
lyrata]
gi|297322021|gb|EFH52442.1| hypothetical protein ARALYDRAFT_906689 [Arabidopsis lyrata subsp.
lyrata]
Length = 140
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVK 70
M ED CA + IPLPNVT KI I+YC KH + ++ LK WD + +K
Sbjct: 22 MDEDKCADNGIPLPNVTSKILLLVIEYCKKH--------VVENEEEEYLKKWDTEFMK 71
>gi|444720606|gb|ELW61388.1| S-phase kinase-associated protein 1 [Tupaia chinensis]
Length = 163
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+F+ +E D+ D +PLPN IF K I++C H
Sbjct: 6 LQSSDGEIFDVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNANAAIFKKVIQWCTHH 65
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ WD + +KVD
Sbjct: 66 KDDPLPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|195393232|ref|XP_002055258.1| GJ18891 [Drosophila virilis]
gi|194149768|gb|EDW65459.1| GJ18891 [Drosophila virilis]
Length = 200
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + N H
Sbjct: 44 LQSSDEEIFDTDIQIAKCSGTIRTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWANYHK 103
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 104 DDPQPTEDDESKEKRTDDITSWDADFLKVD 133
>gi|426263322|emb|CCG34081.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 162
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 18/89 (20%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAV---DRIPLPNVTIKIFYKAIKYCNKHDE 45
L+SSD + FE +M+ED V + IPLPNVT KI K I+YC H E
Sbjct: 7 LQSSDEQEFEVDRAQAEMSVTIKNMLEDMEGVGSENVIPLPNVTGKILQKVIEYCKYHIE 66
Query: 46 --ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+ DD+ WD + KVD
Sbjct: 67 HPTPVSDEKKDEKRTDDIIPWDQEFCKVD 95
>gi|226470472|emb|CAX70516.1| S-phase kinase-associated protein 1A [Schistosoma japonicum]
Length = 140
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L SSDGEVF+ + DD ++ +PLPNV I K I++C H
Sbjct: 6 LASSDGEVFDIDVAIAKQSVTIKTMLDDLGIEEQGDEEPVPLPNVNAGILRKVIQWCTYH 65
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WD + ++VD
Sbjct: 66 KDDPPPQEDDENKERRTDDIPSWDQEFLRVD 96
>gi|297680307|ref|XP_002817941.1| PREDICTED: S-phase kinase-associated protein 1-like, partial [Pongo
abelii]
Length = 207
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 19/89 (21%)
Query: 2 LKSSDGEVFE-------------HMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+FE M+ED D D +PLPNV + K I++C H
Sbjct: 51 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDPVPLPNVNAAVVKKVIQWCTHHK 110
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKV 71
D D DD+ WD + +KV
Sbjct: 111 DDPPPAEDGENKEKQTDDIPVWDQEFLKV 139
>gi|431892655|gb|ELK03088.1| S-phase kinase-associated protein 1 [Pteropus alecto]
Length = 224
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 67 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 126
Query: 44 DEASMFDDLATTSID--DDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 127 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 157
>gi|49388746|dbj|BAD25946.1| putative SKP1 [Oryza sativa Japonica Group]
gi|125563011|gb|EAZ08391.1| hypothetical protein OsI_30651 [Oryza sativa Indica Group]
gi|125604972|gb|EAZ44008.1| hypothetical protein OsJ_28632 [Oryza sativa Japonica Group]
Length = 167
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 18/86 (20%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDEA 46
+L SSDG FE +MIEDDCA + IPL NV I ++YCN+H A
Sbjct: 19 LLVSSDGVKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVAADILAMVVEYCNRHAAA 78
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
+ + ++ ++ +DA+ V +D
Sbjct: 79 AA----NASGQEELIRKFDAEFVNID 100
>gi|195130559|ref|XP_002009719.1| GI15084 [Drosophila mojavensis]
gi|193908169|gb|EDW07036.1| GI15084 [Drosophila mojavensis]
Length = 162
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ IE +DC ++ +PLPNV I K + + H
Sbjct: 6 LQSSDEEIFDTNIEIAKCSGTIRTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDESKEKRTDDITSWDADFLKVD 95
>gi|316928270|gb|ADU59177.1| skpA [Drosophila immigrans]
gi|316928272|gb|ADU59178.1| skpA [Drosophila tripunctata]
gi|316928274|gb|ADU59179.1| skpA [Drosophila phalerata]
gi|316928276|gb|ADU59180.1| skpA [Drosophila falleni]
gi|316928278|gb|ADU59181.1| skpA [Drosophila innubila]
gi|316928280|gb|ADU59182.1| skpA [Drosophila recens]
gi|316928286|gb|ADU59185.1| skpA [Drosophila palustris]
gi|316928288|gb|ADU59186.1| skpA [Drosophila transversa]
gi|316928290|gb|ADU59187.1| skpA [Drosophila suboccidentalis]
Length = 152
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 3 KSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH-- 43
+SSD E+F+ I+ +DC ++ +PLPNV I K + + N H
Sbjct: 1 QSSDEEIFDTDIQIAKCSGTIRTMLEDCGMEEDENAIVPLPNVNSTILRKVLTWANYHKD 60
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 61 DPQPTEDDESKEKRTDDITSWDADFLKVD 89
>gi|29841010|gb|AAP06023.1| SJCHGC06138 protein [Schistosoma japonicum]
gi|226486972|emb|CAX75351.1| S-phase kinase-associated protein 1A [Schistosoma japonicum]
gi|226486974|emb|CAX75352.1| S-phase kinase-associated protein 1A [Schistosoma japonicum]
Length = 163
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L SSDGEVF+ + DD ++ +PLPNV I K I++C H
Sbjct: 6 LASSDGEVFDIDVAIAKQSVTIKTMLDDLGIEEQGDEEPVPLPNVNAGILRKVIQWCTYH 65
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WD + ++VD
Sbjct: 66 KDDPPPQEDDENKERRTDDIPSWDQEFLRVD 96
>gi|281208481|gb|EFA82657.1| cytosolic glycoprotein FP21 [Polysphondylium pallidum PN500]
Length = 172
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 27/98 (27%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRI------------PLPNVTIKIFYKA 36
L+SSD +VFE HM+E C + I PLPNVT I K
Sbjct: 6 LESSDEKVFEVERDIACMAVTIKHMLEGICRKENIDFGDIGETDTAIPLPNVTAAILEKV 65
Query: 37 IKYCNKHDE--ASMFDDLATTSIDDDLKAWDADLVKVD 72
++YC H E DD DD+ WD + KVD
Sbjct: 66 LEYCKHHHEHPTPQQDDKKDEKRLDDIPPWDREYCKVD 103
>gi|195030045|ref|XP_001987879.1| GH19712 [Drosophila grimshawi]
gi|193903879|gb|EDW02746.1| GH19712 [Drosophila grimshawi]
Length = 162
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + N H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIRTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWANYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTDDDESKEKRTDDITSWDADFLKVD 95
>gi|316928282|gb|ADU59183.1| skpA [Drosophila subquinaria]
Length = 152
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 3 KSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH-- 43
+SSD E+F+ I+ +DC ++ +PLPNV I K + + N H
Sbjct: 1 QSSDEEIFDTDIQIAKCSGTIRTMLEDCGMEEDENAIVPLPNVNSTILRKVLTWANYHKD 60
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 61 DAQPTEDDESKEKRTDDITSWDADFLKVD 89
>gi|312371061|gb|EFR19327.1| hypothetical protein AND_22684 [Anopheles darlingi]
Length = 162
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+F+ ++ +D +D +PLPNV I K +++ H
Sbjct: 6 LQSSDGEIFDTDVQIAKCSGTIKTMLEDLGMDEGDDEAVPLPNVNSAILRKVLQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D + DD + DD+ +WDAD +KVD
Sbjct: 66 DDPIPVEDDDSKEKRTDDISSWDADFLKVD 95
>gi|209879962|ref|XP_002141421.1| suppressor of kinetochore protein 1 [Cryptosporidium muris RN66]
gi|209557027|gb|EEA07072.1| suppressor of kinetochore protein 1, putative [Cryptosporidium
muris RN66]
Length = 161
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---DE 45
L SS+GE FE +MIED + D IPLPNV + K I+YC H
Sbjct: 8 LVSSEGEEFEVDICVATASTLIRNMIEDVGSEDPIPLPNVRSDVLRKVIEYCKHHVNNPA 67
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ L + S+ + WD + V ++
Sbjct: 68 KEIPKPLRSNSLTHIVSPWDEEFVNIE 94
>gi|357140518|ref|XP_003571813.1| PREDICTED: LOW QUALITY PROTEIN: SKP1-like protein 4-like
[Brachypodium distachyon]
Length = 191
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 18/84 (21%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHD-----EASMFD----------- 50
++ HMIED CA RIP P+V + + + YC KH +AS D
Sbjct: 41 SQMLRHMIEDCCAGYRIPTPDVYSDVLERVVHYCEKHGPYYDPQASERDRHPFPPFPVEL 100
Query: 51 DLATTSIDD--DLKAWDADLVKVD 72
A +SI LKAWD + + +D
Sbjct: 101 TPAVSSIKPXHGLKAWDKEFINLD 124
>gi|357148202|ref|XP_003574669.1| PREDICTED: SKP1-like protein 1A-like [Brachypodium distachyon]
Length = 184
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 33/104 (31%)
Query: 2 LKSSDGEVFE--------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
L S DGE FE M +DDCA IPLPNV K K ++Y NKH A+
Sbjct: 15 LISQDGESFELSEAAASLSRTVALSMEDDDCAGGNIPLPNVDAKTLAKILEYLNKHAPAA 74
Query: 48 MFDDLATTSI-------------------DDDLKAWDADLVKVD 72
+T + ++++K++DA+ + VD
Sbjct: 75 AASGDSTEAAAATSGEGSEAAAYASKSKEEEEMKSFDAEFIDVD 118
>gi|255083274|ref|XP_002504623.1| predicted protein [Micromonas sp. RCC299]
gi|226519891|gb|ACO65881.1| predicted protein [Micromonas sp. RCC299]
Length = 150
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDA 66
E ++MIED IPLPNV+ KI K I YC H E ++D K +DA
Sbjct: 26 SETIKNMIEDTGLEAPIPLPNVSSKILQKVIDYCKHHSEKK------EGEAEED-KNFDA 78
Query: 67 DLVKVD 72
+ VKVD
Sbjct: 79 EFVKVD 84
>gi|340506313|gb|EGR32480.1| hypothetical protein IMG5_081380 [Ichthyophthirius multifiliis]
Length = 166
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDDLKA 63
+V +HMIED + IP+PNV I K ++YC+KH + + L T ++ + +
Sbjct: 28 SQVIKHMIEDTGTEEAIPIPNVKESILRKILEYCDKHRNDNPPEIEKPLTTNNLSEVVDP 87
Query: 64 WDADLV 69
+DA +
Sbjct: 88 YDAKFI 93
>gi|357470445|ref|XP_003605507.1| SKP1-like protein [Medicago truncatula]
gi|355506562|gb|AES87704.1| SKP1-like protein [Medicago truncatula]
Length = 166
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 9 VFEHMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDAD 67
+ EH+I D C IP+ NVT KI I+YC KH +A+ D+L+ WDA+
Sbjct: 53 LIEHLIHDGCTNHIGIPISNVTGKILAMVIEYCKKHVDAAS---------SDELEKWDAE 103
Query: 68 LVKVD 72
K+D
Sbjct: 104 FDKID 108
>gi|316928284|gb|ADU59184.1| skpA [Drosophila quinaria]
Length = 152
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 3 KSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH-- 43
+SSD E+F+ I+ +DC ++ +PLPNV I K + + N H
Sbjct: 1 QSSDEEIFDTDIQIAKCSGTIRTMLEDCGMEEDENAIVPLPNVNSTILRKVLTWANFHKD 60
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 61 DPQPTEDDESKEKRTDDITSWDADFLKVD 89
>gi|333952087|gb|AEG25561.1| skpA [Drosophila quinaria]
gi|333952089|gb|AEG25562.1| skpA [Drosophila quinaria]
gi|333952091|gb|AEG25563.1| skpA [Drosophila quinaria]
gi|333952093|gb|AEG25564.1| skpA [Drosophila quinaria]
gi|333952095|gb|AEG25565.1| skpA [Drosophila quinaria]
gi|333952097|gb|AEG25566.1| skpA [Drosophila quinaria]
gi|333952099|gb|AEG25567.1| skpA [Drosophila quinaria]
gi|333952101|gb|AEG25568.1| skpA [Drosophila quinaria]
gi|333952103|gb|AEG25569.1| skpA [Drosophila quinaria]
gi|333952105|gb|AEG25570.1| skpA [Drosophila quinaria]
gi|333952107|gb|AEG25571.1| skpA [Drosophila quinaria]
gi|333952109|gb|AEG25572.1| skpA [Drosophila quinaria]
gi|333952111|gb|AEG25573.1| skpA [Drosophila quinaria]
gi|333952113|gb|AEG25574.1| skpA [Drosophila quinaria]
gi|333952115|gb|AEG25575.1| skpA [Drosophila quinaria]
gi|333952117|gb|AEG25576.1| skpA [Drosophila quinaria]
gi|333952119|gb|AEG25577.1| skpA [Drosophila quinaria]
gi|333952121|gb|AEG25578.1| skpA [Drosophila quinaria]
gi|333952123|gb|AEG25579.1| skpA [Drosophila quinaria]
gi|333952125|gb|AEG25580.1| skpA [Drosophila quinaria]
gi|333952127|gb|AEG25581.1| skpA [Drosophila quinaria]
gi|333952129|gb|AEG25582.1| skpA [Drosophila quinaria]
gi|333952131|gb|AEG25583.1| skpA [Drosophila quinaria]
gi|333952133|gb|AEG25584.1| skpA [Drosophila quinaria]
gi|333952135|gb|AEG25585.1| skpA [Drosophila quinaria]
gi|333952137|gb|AEG25586.1| skpA [Drosophila quinaria]
gi|333952139|gb|AEG25587.1| skpA [Drosophila quinaria]
gi|333952141|gb|AEG25588.1| skpA [Drosophila quinaria]
gi|333952143|gb|AEG25589.1| skpA [Drosophila quinaria]
gi|333952145|gb|AEG25590.1| skpA [Drosophila quinaria]
gi|333952147|gb|AEG25591.1| skpA [Drosophila quinaria]
gi|333952149|gb|AEG25592.1| skpA [Drosophila quinaria]
gi|333952151|gb|AEG25593.1| skpA [Drosophila quinaria]
gi|333952153|gb|AEG25594.1| skpA [Drosophila quinaria]
gi|333952155|gb|AEG25595.1| skpA [Drosophila quinaria]
gi|333952157|gb|AEG25596.1| skpA [Drosophila quinaria]
gi|333952159|gb|AEG25597.1| skpA [Drosophila quinaria]
Length = 150
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 3 KSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH-- 43
+SSD E+F+ I+ +DC ++ +PLPNV I K + + N H
Sbjct: 1 QSSDEEIFDTDIQIAKCSGTIRTMLEDCGMEEDENAIVPLPNVNSTILRKVLTWANFHKD 60
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 61 DPQPTEDDESKEKRTDDITSWDADFLKVD 89
>gi|328871641|gb|EGG20011.1| cytosolic glycoprotein FP21 [Dictyostelium fasciculatum]
Length = 161
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDE-- 45
L+S+D +VFE +M+ED D IPLPNVT I K ++YC H E
Sbjct: 6 LESADEKVFEVERDIACMAVTIKNMLEDIGETDTAIPLPNVTSNILEKVLEYCKHHKEHP 65
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
D+ DD+ WD + KVD
Sbjct: 66 TPQQDEKKDEKRLDDIPPWDREFCKVD 92
>gi|452822729|gb|EME29746.1| E3 ubiquitin ligase SCF complex SKP1 subunit [Galdieria
sulphuraria]
Length = 155
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 18/84 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L SSD E+FE +++ED + IPLPNV +I K ++YC H S+
Sbjct: 10 LVSSDNEIFEVETSIISLSETIKNVLEDTEDTESIPLPNVEGRILAKVVEYCRYH---SL 66
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
+ + ++D++ WD + + VD
Sbjct: 67 LKTIPQS--EEDIERWDREFLNVD 88
>gi|256052152|ref|XP_002569641.1| skp1-related [Schistosoma mansoni]
Length = 163
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L SSDGEVF+ + DD ++ +PLPNV I K I++C H
Sbjct: 6 LASSDGEVFDIDVAIAKQSDTIKTMLDDLGLEEQGDEEPVPLPNVNAGILRKVIQWCTYH 65
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WD + ++VD
Sbjct: 66 KDDPPPQEDDENKERRTDDIPSWDQEFLRVD 96
>gi|360042665|emb|CCD78075.1| skp1-related [Schistosoma mansoni]
Length = 163
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L SSDGEVF+ + DD ++ +PLPNV I K I++C H
Sbjct: 6 LASSDGEVFDIDVAIAKQSVTIKTMLDDLGLEEQGDEEPVPLPNVNAGILRKVIQWCTYH 65
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WD + ++VD
Sbjct: 66 KDDPPPQEDDENKERRTDDIPSWDQEFLRVD 96
>gi|58386527|ref|XP_314827.2| AGAP008719-PA [Anopheles gambiae str. PEST]
gi|55239915|gb|EAA10209.2| AGAP008719-PA [Anopheles gambiae str. PEST]
Length = 162
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+F+ ++ +D +D +PLPNV I K +++ H
Sbjct: 6 LQSSDGEIFDTDVQIAKCSGTIKTMLEDLGMDEGDDEVVPLPNVNSAILRKVLQWATFHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D + DD + DD+ +WDAD +KVD
Sbjct: 66 DDPIPVEDDDSKEKRTDDISSWDADFLKVD 95
>gi|426263308|emb|CCG34074.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 161
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 19/89 (21%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDR---IPLPNVTIKIFYKAIKYCNKHDE 45
L+SSD +VF +HM+ DD D+ IPLPNVT KI K I+YC H E
Sbjct: 7 LESSDEQVFDVDRKIAEMSVTVKHML-DDLEADQDVPIPLPNVTGKILQKVIEYCKYHHE 65
Query: 46 A--SMFDDLATTSIDDDLKAWDADLVKVD 72
D+ DD+ WD D VD
Sbjct: 66 HPDPPSDEKKDEKRTDDIIPWDKDFCDVD 94
>gi|195045532|ref|XP_001991991.1| GH24518 [Drosophila grimshawi]
gi|193892832|gb|EDV91698.1| GH24518 [Drosophila grimshawi]
Length = 162
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SS+ E+F+ I+ +DC ++ +PLPNV I K + + N H
Sbjct: 6 LQSSNEEIFDTDIQIAKCSGTIRTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWANYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDESKEKRTDDITSWDADFLKVD 95
>gi|316927736|gb|ADU58910.1| skpA [Drosophila putrida]
gi|316927738|gb|ADU58911.1| skpA [Drosophila putrida]
gi|316927740|gb|ADU58912.1| skpA [Drosophila putrida]
gi|316927742|gb|ADU58913.1| skpA [Drosophila putrida]
gi|316927744|gb|ADU58914.1| skpA [Drosophila putrida]
gi|316927746|gb|ADU58915.1| skpA [Drosophila putrida]
gi|316927748|gb|ADU58916.1| skpA [Drosophila putrida]
gi|316927750|gb|ADU58917.1| skpA [Drosophila putrida]
gi|316927752|gb|ADU58918.1| skpA [Drosophila putrida]
gi|316927754|gb|ADU58919.1| skpA [Drosophila putrida]
Length = 144
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVK 70
M ED+ A+ +PLPNV I K + + N H D DD + DD+ +WDAD +K
Sbjct: 23 MEEDENAI--VPLPNVNSTILRKVLTWANYHKDDPQPTEDDESKEKRTDDITSWDADFLK 80
Query: 71 VD 72
VD
Sbjct: 81 VD 82
>gi|316927756|gb|ADU58920.1| skpA [Drosophila orientacea]
gi|316927758|gb|ADU58921.1| skpA [Drosophila orientacea]
gi|316927760|gb|ADU58922.1| skpA [Drosophila orientacea]
gi|316927762|gb|ADU58923.1| skpA [Drosophila orientacea]
gi|316927764|gb|ADU58924.1| skpA [Drosophila orientacea]
gi|316927766|gb|ADU58925.1| skpA [Drosophila orientacea]
gi|316927768|gb|ADU58926.1| skpA [Drosophila orientacea]
gi|316927770|gb|ADU58927.1| skpA [Drosophila orientacea]
gi|316927772|gb|ADU58928.1| skpA [Drosophila orientacea]
gi|316927774|gb|ADU58929.1| skpA [Drosophila orientacea]
gi|316927776|gb|ADU58930.1| skpA [Drosophila testacea]
gi|316927778|gb|ADU58931.1| skpA [Drosophila testacea]
gi|316927780|gb|ADU58932.1| skpA [Drosophila testacea]
gi|316927782|gb|ADU58933.1| skpA [Drosophila testacea]
gi|316927784|gb|ADU58934.1| skpA [Drosophila testacea]
gi|316927786|gb|ADU58935.1| skpA [Drosophila testacea]
gi|316927788|gb|ADU58936.1| skpA [Drosophila testacea]
gi|316927790|gb|ADU58937.1| skpA [Drosophila testacea]
gi|316927792|gb|ADU58938.1| skpA [Drosophila testacea]
gi|316927794|gb|ADU58939.1| skpA [Drosophila neotestacea]
gi|316927796|gb|ADU58940.1| skpA [Drosophila neotestacea]
gi|316927798|gb|ADU58941.1| skpA [Drosophila neotestacea]
gi|316927800|gb|ADU58942.1| skpA [Drosophila neotestacea]
gi|316927802|gb|ADU58943.1| skpA [Drosophila neotestacea]
gi|316927804|gb|ADU58944.1| skpA [Drosophila neotestacea]
gi|316927806|gb|ADU58945.1| skpA [Drosophila neotestacea]
gi|316927808|gb|ADU58946.1| skpA [Drosophila neotestacea]
gi|316927810|gb|ADU58947.1| skpA [Drosophila neotestacea]
gi|316927812|gb|ADU58948.1| skpA [Drosophila neotestacea]
Length = 144
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVK 70
M ED+ A+ +PLPNV I K + + N H D DD + DD+ +WDAD +K
Sbjct: 23 MEEDENAI--VPLPNVNSTILRKVLTWANYHKDDPQPTEDDESKEKRTDDITSWDADFLK 80
Query: 71 VD 72
VD
Sbjct: 81 VD 82
>gi|426263318|emb|CCG34079.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 160
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIED--DCAVDRIPLPNVTIKIFYKAIKYCNKHDE- 45
L+SSD + FE +M+ED + + IPLPNVT KI K I+YC H E
Sbjct: 6 LQSSDDQEFEVEKTQAEMSVSIKNMLEDMESLSDNPIPLPNVTGKILQKVIEYCKYHIEH 65
Query: 46 -ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ ++ DD+ WD + KVD
Sbjct: 66 PTPVSEEKKDEKRTDDIVPWDQEFCKVD 93
>gi|226486976|emb|CAX75353.1| S-phase kinase-associated protein 1A [Schistosoma japonicum]
Length = 201
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L SSDGEVF+ + DD ++ +PLPNV I K I++C H
Sbjct: 6 LASSDGEVFDIDVAIAKQSVTIKTMLDDLGIEEQGDEEPVPLPNVNAGILRKVIQWCTYH 65
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WD + ++VD
Sbjct: 66 KDDPPPQEDDENKERRTDDIPSWDQEFLRVD 96
>gi|195436106|ref|XP_002066019.1| GK21211 [Drosophila willistoni]
gi|194162104|gb|EDW77005.1| GK21211 [Drosophila willistoni]
Length = 162
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 21/92 (22%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNK 42
ML+SSD E+F + M+ED C V+ +PLPNV + + + N
Sbjct: 5 MLQSSDKEIFVTDIKIAKCSGLIKRMLED-CGVENDENEVVPLPNVNSSTLRRVLTWANY 63
Query: 43 H--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
H D DD DD+ WDAD ++VD
Sbjct: 64 HKDDPQPSEDDEPKEKRTDDIIPWDADFLQVD 95
>gi|426263300|emb|CCG34070.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 165
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 2 LKSSDGEVFE-------------HMIED---DCAVDRIPLPNVTIKIFYKAIKYCNKHDE 45
L+SSD VFE HM+ED + IPLPNVT KI K I+YC H E
Sbjct: 10 LESSDDTVFEVPREIAEMSVTVKHMLEDIDPSGEDNPIPLPNVTGKILQKVIEYCKYHHE 69
Query: 46 A--SMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+ DD+ WD + VD
Sbjct: 70 HPDAPSDEKKDEKRTDDIIPWDKEFCDVD 98
>gi|426263306|emb|CCG34073.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 161
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIED--DCAVDRIPLPNVTIKIFYKAIKYCNKHDEA 46
L SSD +VFE HM++D + + IPLPNVT KI K I YC H+E
Sbjct: 7 LGSSDEQVFEVDRKIAEMSVTVKHMLDDLDTDSENPIPLPNVTGKILQKVIDYCKHHNEH 66
Query: 47 --SMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+ DD+ WD + VD
Sbjct: 67 PDAPSDEKKDEKRTDDILPWDKEFCDVD 94
>gi|426263298|emb|CCG34069.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 165
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 2 LKSSDGEVFE-------------HMIED---DCAVDRIPLPNVTIKIFYKAIKYCNKHDE 45
L+SSD VFE HM+ED + IPLPNVT KI K I+YC H E
Sbjct: 10 LESSDDTVFEVPREIAEMSVTVKHMLEDIDPSGEDNPIPLPNVTGKILQKVIEYCKYHHE 69
Query: 46 A--SMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+ DD+ WD + VD
Sbjct: 70 HPDAPSDEKKDEKRTDDIIPWDKEFCDVD 98
>gi|240848865|ref|NP_001155646.1| S-phase kinase-associated protein-like [Acyrthosiphon pisum]
gi|239791849|dbj|BAH72336.1| ACYPI005897 [Acyrthosiphon pisum]
Length = 162
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIEDDCA-----------------VDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGEVF+ E A + +PLPNV I K I++ H
Sbjct: 6 LQSSDGEVFQVDFEIAKASVTIKTMVEDLGLEEEDEENVPLPNVNAGILKKVIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPVAEDDEGREKRTDDISSWDADFLKVD 95
>gi|417408284|gb|JAA50703.1| Putative s-phase kinase-associated protein 1-like isoform 5,
partial [Desmodus rotundus]
Length = 165
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E +D +D +PLPNV I K I++C H
Sbjct: 8 LQSSDGEIFEGDVEIAKQSVTIKTILEDLGMDNEGDDDPVPLPNVNAAILKKVIQWCTHH 67
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 68 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 98
>gi|260814466|ref|XP_002601936.1| hypothetical protein BRAFLDRAFT_124598 [Branchiostoma floridae]
gi|229287239|gb|EEN57948.1| hypothetical protein BRAFLDRAFT_124598 [Branchiostoma floridae]
Length = 196
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E +D +D IPLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDEEGDEEPIPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|66826197|ref|XP_646453.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum AX4]
gi|1706890|sp|P52285.1|SKP1A_DICDI RecName: Full=SCF ubiquitin ligase complex protein SKP1a;
AltName: Full=Glycoprotein FP21 isoform A; Contains:
RecName: Full=SCF ubiquitin ligase complex protein
SKP1a(4-162); Contains: RecName: Full=SCF ubiquitin
ligase complex protein SKP1a(6-162)
gi|639924|gb|AAA67888.1| glycoprotein FP21 [Dictyostelium discoideum]
gi|1658022|gb|AAB88389.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum]
gi|60474028|gb|EAL71965.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum AX4]
Length = 162
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDE-- 45
L+SSD +VFE +MIED D IPLPNVT I K + YC H +
Sbjct: 6 LESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHP 65
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ DD DD+ +D D KVD
Sbjct: 66 SPQGDDKKDEKRLDDIPPYDRDFCKVD 92
>gi|294905720|ref|XP_002777663.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
gi|239885554|gb|EER09479.1| glycoprotein FP21 precursor, putative [Perkinsus marinus ATCC
50983]
Length = 169
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SS GEVF ++M+ED + IPLPNV I K I YC KH +++
Sbjct: 15 LRSSQGEVFDVPTNVACMSNLIQNMVEDGGVDEEIPLPNVKTAILAKVIDYC-KHHKSNP 73
Query: 49 FDDL-----ATTSIDDDLKAWDADLVKVD 72
D++ +T + + WD V ++
Sbjct: 74 PDEISKPLKSTNLAECGVSDWDCGYVNIE 102
>gi|242247641|ref|NP_001156278.1| S-phase kinase-associated protein-like [Acyrthosiphon pisum]
gi|239799322|dbj|BAH70587.1| ACYPI008850 [Acyrthosiphon pisum]
Length = 162
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIEDDCAVDRI-----------------PLPNVTIKIFYKAIKYCNKH- 43
L+SSDGEVF+ E A I PLPNV I K I++ H
Sbjct: 6 LQSSDGEVFQVDFEIAKASVTIKTMVEDLGLEEEDEEIVPLPNVNAGILKKVIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPPAEDDEGREKRTDDISSWDADFLKVD 95
>gi|145356337|ref|XP_001422389.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582631|gb|ABP00706.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 151
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 18/84 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
L+SSD E FE +IED +PLPNV KI K I+YC H +A
Sbjct: 7 LRSSDDETFEVDEDVAFLSETIKSIIEDTENDAPVPLPNVNSKILTKVIEYCKYHVKAKK 66
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
++ + ++KA++ D VKVD
Sbjct: 67 ENES-----EANVKAFNNDFVKVD 85
>gi|66822139|ref|XP_644424.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum AX4]
gi|66822943|ref|XP_644826.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum AX4]
gi|74857693|sp|Q557E4.1|SKP1B_DICDI RecName: Full=SCF ubiquitin ligase complex protein SKP1b;
AltName: Full=Glycoprotein FP21 isoform B; Contains:
RecName: Full=SCF ubiquitin ligase complex protein
SKP1b(4-162); Contains: RecName: Full=SCF ubiquitin
ligase complex protein SKP1b(6-162)
gi|1658024|gb|AAB88390.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum]
gi|60472547|gb|EAL70498.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum AX4]
gi|60472894|gb|EAL70843.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum AX4]
Length = 162
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDE-- 45
L+SSD +VFE +MIED D IPLPNVT I K + YC H +
Sbjct: 6 LESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHP 65
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ DD DD+ +D D KVD
Sbjct: 66 SPQGDDKKDEKRLDDIPPYDRDFCKVD 92
>gi|22093770|dbj|BAC07061.1| putative Skp1(S-phase kinase-associated protein1) [Oryza sativa
Japonica Group]
Length = 233
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 13/55 (23%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
LKS++G+ F HMI+DDC + +PLPNV K K I+Y ++H
Sbjct: 86 LKSNEGKAFVVTEVSARQSTTIGHMIDDDCTREAVPLPNVDSKTLEKVIEYFDEH 140
>gi|426371904|ref|XP_004052879.1| PREDICTED: S-phase kinase-associated protein 1-like [Gorilla
gorilla gorilla]
Length = 200
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 24/93 (25%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SS GE+FE ++E D+ D +PLPNV I K I+ C H
Sbjct: 43 LQSSGGEIFEVVVEIVKQSVTIKTMLEDLGMNDEGDHDPVPLPNVNAAILKKVIQRCTHH 102
Query: 44 DE----ASMFDDLATTSIDDDLKAWDADLVKVD 72
++ ++++ + DD+ WD + +KVD
Sbjct: 103 EDDPPPPKVYENKEKRT--DDIPVWDQEFLKVD 133
>gi|307172386|gb|EFN63852.1| S-phase kinase-associated protein 1 [Camponotus floridanus]
gi|307199189|gb|EFN79876.1| S-phase kinase-associated protein 1 [Harpegnathos saltator]
gi|332025844|gb|EGI66000.1| S-phase kinase-associated protein 1 [Acromyrmex echinatior]
Length = 162
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVFE +E +D +D +PLPNV I K I++ H
Sbjct: 6 LQSSDGEVFEVDVEIAKCSVTIKTMLEDLGMDEDEEEVVPLPNVNSAILRKVIQWATYHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 66 DDPPPPEDDENKEKRTDDISSWDADFLKVD 95
>gi|330795031|ref|XP_003285579.1| cytosolic glycoprotein FP21 [Dictyostelium purpureum]
gi|325084492|gb|EGC37919.1| cytosolic glycoprotein FP21 [Dictyostelium purpureum]
Length = 163
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDE-- 45
L+SSD +VFE +MIED D IPLPNVT I K + YC H +
Sbjct: 7 LESSDEKVFEIEKDIACMSVTIKNMIEDIGESDTPIPLPNVTSTILEKVLDYCKHHHQHP 66
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ DD DD+ +D D KVD
Sbjct: 67 SPQADDKKDEKRLDDIPPYDRDFCKVD 93
>gi|125559233|gb|EAZ04769.1| hypothetical protein OsI_26934 [Oryza sativa Indica Group]
Length = 207
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 13/55 (23%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
LKS++G+ F HMI+DDC + +PLPNV K K I+Y ++H
Sbjct: 60 LKSNEGKAFVVTEASARQSTTIGHMIDDDCTREAVPLPNVDSKTLEKVIEYFDEH 114
>gi|289740495|gb|ADD18995.1| SCF ubiquitin ligase skp1 component [Glossina morsitans
morsitans]
Length = 162
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ ++ +DC ++ +PLPNV I K + + N H
Sbjct: 6 LQSSDDEIFDTDVQIAKCSGTIKTMLEDCGMEDGDNAVVPLPNVNSAILRKVLHWANFHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDENKEKRTDDISSWDADFLKVD 95
>gi|125601147|gb|EAZ40723.1| hypothetical protein OsJ_25192 [Oryza sativa Japonica Group]
Length = 178
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 13/55 (23%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
LKS++G+ F HMI+DDC + +PLPNV K K I+Y ++H
Sbjct: 31 LKSNEGKAFVVTEVSARQSTTIGHMIDDDCTREAVPLPNVDSKTLEKVIEYFDEH 85
>gi|26347143|dbj|BAC37220.1| unnamed protein product [Mus musculus]
Length = 163
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGNDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|22093766|dbj|BAC07057.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125601143|gb|EAZ40719.1| hypothetical protein OsJ_25188 [Oryza sativa Japonica Group]
Length = 221
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 19/78 (24%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEAS 47
L+SSDGEV + ++I+D + IPLP+V+ K K ++YC+KH DE S
Sbjct: 103 LESSDGEVVKVKEASARLSKTIGNIIDDGRGDEAIPLPDVSYKTLKKVVEYCDKHADEKS 162
Query: 48 MFDDLATTSIDDDLKAWD 65
D+ ++LK WD
Sbjct: 163 DTDEQK-----EELKNWD 175
>gi|224121774|ref|XP_002318669.1| predicted protein [Populus trichocarpa]
gi|222859342|gb|EEE96889.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDEAS 47
LK+SD EVFE M+ED D IPL NV K K +++ KH
Sbjct: 13 LKTSDNEVFEVEEKAALQSGIIKSMVEDGYGTDDAIPLFNVEKKTLAKIVEWLKKH---- 68
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
A+ + D+L+ WDAD V VD
Sbjct: 69 -----ASDASKDELEKWDADFVDVD 88
>gi|301099161|ref|XP_002898672.1| S-phase kinase-associated protein 1A [Phytophthora infestans
T30-4]
gi|262104745|gb|EEY62797.1| S-phase kinase-associated protein 1A [Phytophthora infestans
T30-4]
Length = 182
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 15 EDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLV 69
E+ V IPLPNV + K +++C H +A M + L + + + + AWDA V
Sbjct: 41 EEGGEVQEIPLPNVKSHVLAKVVEFCRHHKDAPMAEIQKPLKSNVLSESIDAWDAKFV 98
>gi|357501489|ref|XP_003621033.1| SKP1-like protein [Medicago truncatula]
gi|124360693|gb|ABN08682.1| SKP1 component [Medicago truncatula]
gi|355496048|gb|AES77251.1| SKP1-like protein [Medicago truncatula]
Length = 135
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Query: 2 LKSSDGEVFE---------HMIEDDCAVD-RIPLPNVTIKIFYKAIKYCNKHDE-ASMFD 50
LKSSD FE + DD A D I +P +T KI K I+YC KH E AS ++
Sbjct: 12 LKSSDSVTFEIEEVVFQSIKNLTDDVADDIEILVPRITGKILAKVIEYCKKHVEAASSYE 71
Query: 51 DLATTSIDDDLKAWDADLVKVD 72
L DD L W + V+VD
Sbjct: 72 KL----FDDKLNKWYTEFVEVD 89
>gi|29841403|gb|AAP06435.1| similar to GenBank Accession Number U37558 OCP2 in Homo sapiens;
transcription elongation factor B polypeptide 1-like;
organ of Corti protein 2 in Homo sapiens [Schistosoma
japonicum]
gi|226486978|emb|CAX75354.1| S-phase kinase-associated protein 1A [Schistosoma japonicum]
Length = 134
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 14 IEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKV 71
IE+ + +PLPNV I K I++C H D DD DD+ +WD + ++V
Sbjct: 7 IEEQGDEEPVPLPNVNAGILRKVIQWCTYHKDDPPPQEDDENKERRTDDIPSWDQEFLRV 66
Query: 72 D 72
D
Sbjct: 67 D 67
>gi|46451227|gb|AAS97867.1| telomerase-associated protein p20 [Tetrahymena thermophila]
Length = 166
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 7 GEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDDLKA 63
++ ++MIED D IP+PNV +I K ++YC KH + + L T+++ + +
Sbjct: 28 SQLIKNMIEDTGTEDDIPIPNVKKEILLKILEYCEKHKNDNPPEIEKPLTTSNLSELVDP 87
Query: 64 WDADLVKVD 72
+DA + ++
Sbjct: 88 YDAKFIDIE 96
>gi|157093095|gb|ABV22202.1| skp1 family protein [Karlodinium micrum]
Length = 164
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDE--- 45
LKSS GE+FE +M++D + IPLPNV I K I YC H +
Sbjct: 10 LKSSQGEIFEVEPEVACMSTLIKNMVDDSGTDEEIPLPNVKTAILSKVIDYCKFHKDNPP 69
Query: 46 ASMFDDLATTSIDD-DLKAWDADLVKVD 72
+ L +T++ + + WD++ V ++
Sbjct: 70 EEIQKPLKSTNLMECGVSEWDSEYVNIE 97
>gi|238015110|gb|ACR38590.1| unknown [Zea mays]
gi|414884233|tpg|DAA60247.1| TPA: hypothetical protein ZEAMMB73_004276 [Zea mays]
Length = 303
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 2 LKSSDGEV-------------FEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEAS 47
L+SSDGEV +IE + V + + LP V ++YCNKH EA
Sbjct: 138 LRSSDGEVHRVSEAAARLSGLLRGIIETNVTVTKGVILPTVDGTTLVTVLEYCNKHAEAE 197
Query: 48 MFDDLATTSID-----DDLKAWDADLV 69
+ T+++D + L+AWD DL+
Sbjct: 198 AAAGVTTSAVDRAAASEALEAWDRDLL 224
>gi|426263320|emb|CCG34080.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 161
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR---IPLPNVTIKIFYKAIKYCNKH-- 43
L+SSD + FE +M+ED V IPLPNVT KI K I+YC H
Sbjct: 6 LQSSDEQEFEVDRGVAEMSVTIKNMLEDMEGVGSDTAIPLPNVTGKILAKVIEYCKYHKA 65
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+ + ++ DD+ WD + KVD
Sbjct: 66 NPTPVSEEKKDEKRTDDIIPWDLEFCKVD 94
>gi|225717314|gb|ACO14503.1| S-phase kinase-associated protein 1 [Esox lucius]
Length = 163
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVD------RIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E +D +D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDGPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDESKEKRTDDIPVWDQEFLKVD 96
>gi|226492459|ref|NP_001144039.1| uncharacterized protein LOC100276863 [Zea mays]
gi|195635853|gb|ACG37395.1| hypothetical protein [Zea mays]
Length = 303
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 2 LKSSDGEV-------------FEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEAS 47
L+SSDGEV +IE + V + + LP V ++YCNKH EA
Sbjct: 138 LRSSDGEVHRVSEAAARLSGLLRGIIETNVTVTKGVILPTVDGTTLVTVLEYCNKHAEAE 197
Query: 48 MFDDLATTSID-----DDLKAWDADLV 69
+ T+++D + L+AWD DL+
Sbjct: 198 AAAGVTTSAVDRAAASEALEAWDRDLL 224
>gi|443720668|gb|ELU10319.1| hypothetical protein CAPTEDRAFT_176677 [Capitella teleta]
Length = 173
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 30/101 (29%)
Query: 2 LKSSDGEVFEHMIE--------------DDCAV--------------DRIPLPNVTIKIF 33
L+SSDGE+FE +E + C + +PLPNV I
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEGESCPCPLLLLYLGMDEDEEEVVPLPNVNAAIL 65
Query: 34 YKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
K I++C H D DD DD+ +WD + +KVD
Sbjct: 66 KKVIQWCTYHKDDPPPSEDDENKEKRTDDISSWDTEFLKVD 106
>gi|74177667|dbj|BAE38934.1| unnamed protein product [Mus musculus]
Length = 163
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR------IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E +D +D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDNEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|332838738|ref|XP_003313582.1| PREDICTED: S-phase kinase-associated protein 1-like [Pan
troglodytes]
Length = 200
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 24/93 (25%)
Query: 2 LKSSDGEVFE------------HMIEDDCAV------DRIPLPNVTIKIFYKAIKYCNKH 43
L+SS GE+FE I +D + D +PLPNV I K I++C+ H
Sbjct: 43 LQSSGGEIFEVDVEIVKQSVTIKTILEDLGMNEEGDHDPVPLPNVNAAILKKVIQWCHPH 102
Query: 44 DE----ASMFDDLATTSIDDDLKAWDADLVKVD 72
++ + ++++ + DD+ WD + +KVD
Sbjct: 103 EDDPPASKVYENKEKRT--DDIPVWDQEFLKVD 133
>gi|355719544|gb|AES06636.1| S-phase kinase-associated protein 1 [Mustela putorius furo]
Length = 161
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 14 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 73
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 74 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 104
>gi|320164148|gb|EFW41047.1| skp1 [Capsaspora owczarzaki ATCC 30864]
Length = 160
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 17/88 (19%)
Query: 2 LKSSDG-------------EVFEHMIEDDCA--VDRIPLPNVTIKIFYKAIKYCNKH--D 44
L+SSDG E ++M+ED + IP+PNVT I K I+YC H D
Sbjct: 6 LQSSDGREFTVDAKAAKMSETIKNMLEDLGGDGENAIPVPNVTGAILEKVIQYCLHHKDD 65
Query: 45 EASMFDDLATTSIDDDLKAWDADLVKVD 72
+ ++ + +++ AWDA+ KVD
Sbjct: 66 VPKVVEEDPSKPKKEEIDAWDAEFCKVD 93
>gi|426263302|emb|CCG34071.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 164
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE-------------HMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKHD 44
L+S+D +VFE HM+ED + A + IPLPNV KI K I YC H+
Sbjct: 8 LESADDQVFEVPRNIAEMSVTVKHMLEDIDPSNDADNPIPLPNVQGKILAKVIDYCKYHN 67
Query: 45 EA--SMFDDLATTSIDDDLKAWDADLVKVD 72
E + D+ DD+ WD + VD
Sbjct: 68 EHPDAPSDEKKDEKRTDDIIPWDKEFCDVD 97
>gi|145579295|pdb|2E31|B Chain B, Structural Basis For Selection Of Glycosylated Substrate
By Scffbs1 Ubiquitin Ligase
gi|145579297|pdb|2E32|B Chain B, Structural Basis For Selection Of Glycosylated Substrate
By Scffbs1 Ubiquitin Ligase
gi|145579299|pdb|2E32|D Chain D, Structural Basis For Selection Of Glycosylated Substrate
By Scffbs1 Ubiquitin Ligase
Length = 166
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 9 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 68
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 69 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 99
>gi|221222266|gb|ACM09794.1| S-phase kinase-associated protein 1 [Salmo salar]
Length = 163
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|190690907|gb|ACE87228.1| S-phase kinase-associated protein 1 protein [synthetic construct]
Length = 163
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|332821941|ref|XP_001166207.2| PREDICTED: S-phase kinase-associated protein 1 isoform 5 [Pan
troglodytes]
gi|397518297|ref|XP_003829329.1| PREDICTED: S-phase kinase-associated protein 1 isoform 2 [Pan
paniscus]
gi|397518299|ref|XP_003829330.1| PREDICTED: S-phase kinase-associated protein 1 isoform 3 [Pan
paniscus]
gi|410039704|ref|XP_003950673.1| PREDICTED: S-phase kinase-associated protein 1 [Pan troglodytes]
gi|426349968|ref|XP_004042556.1| PREDICTED: S-phase kinase-associated protein 1 [Gorilla gorilla
gorilla]
gi|426349970|ref|XP_004042557.1| PREDICTED: S-phase kinase-associated protein 1 [Gorilla gorilla
gorilla]
Length = 174
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 17 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 76
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 77 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 107
>gi|118361159|ref|XP_001013810.1| Suppressor of kinetochore protein 1 [Tetrahymena thermophila]
gi|89295577|gb|EAR93565.1| Suppressor of kinetochore protein 1 [Tetrahymena thermophila SB210]
Length = 251
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 4 SSDGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDD 60
+ ++ ++MIED D IP+PNV +I K ++YC KH + + L T+++ +
Sbjct: 110 AKKSQLIKNMIEDTGTEDDIPIPNVKKEILLKILEYCEKHKNDNPPEIEKPLTTSNLSEL 169
Query: 61 LKAWDADLVKVD 72
+ +DA + ++
Sbjct: 170 VDPYDAKFIDIE 181
>gi|410968966|ref|XP_003990970.1| PREDICTED: S-phase kinase-associated protein 1-like [Felis catus]
Length = 163
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEVAKQSVTVKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|291413888|ref|XP_002723198.1| PREDICTED: S-phase kinase-associated protein 1 isoform 1
[Oryctolagus cuniculus]
Length = 163
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|159138037|gb|ABW89021.1| RNA polymerase II elongation factor [Clonorchis sinensis]
Length = 163
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 4 SSDGEVFE------------HMIEDDCAVDR------IPLPNVTIKIFYKAIKYCNKH-- 43
SSDGE+F+ + DD ++ +PLPNV I K I++C H
Sbjct: 8 SSDGEIFDVDVAIARQSVTIKTMLDDLGMEEQGDEEPVPLPNVNAGILRKVIQWCTYHRD 67
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WD + ++VD
Sbjct: 68 DPPPQEDDENKERRTDDIPSWDQEFLRVD 96
>gi|148701670|gb|EDL33617.1| mCG3634, isoform CRA_a [Mus musculus]
Length = 159
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|426263304|emb|CCG34072.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 159
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIED-DCAVDR-IPLPNVTIKIFYKAIKYCNKHDEA 46
L+SSD +V E HM++D D D IPLPNVT KI K I YC H+E
Sbjct: 5 LESSDEQVVEVDRKIAEMSVTVKHMLDDLDADSDNPIPLPNVTGKILQKVIDYCKYHNEH 64
Query: 47 --SMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+ DD+ WD D VD
Sbjct: 65 PDAPSDEKKDEKRTDDIIPWDKDFCDVD 92
>gi|296489787|tpg|DAA31900.1| TPA: S-phase kinase-associated protein 1A (p19A)-like [Bos
taurus]
Length = 163
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|149451884|ref|XP_001513378.1| PREDICTED: S-phase kinase-associated protein 1-like, partial
[Ornithorhynchus anatinus]
Length = 105
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|432117766|gb|ELK37919.1| S-phase kinase-associated protein 1 [Myotis davidii]
Length = 163
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|56090475|ref|NP_001007609.1| S-phase kinase-associated protein 1 [Rattus norvegicus]
gi|158854016|ref|NP_035673.3| S-phase kinase-associated protein 1 [Mus musculus]
gi|213512347|ref|NP_001134437.1| S-phase kinase-associated protein 1 [Salmo salar]
gi|348527956|ref|XP_003451485.1| PREDICTED: S-phase kinase-associated protein 1-like [Oreochromis
niloticus]
gi|432895683|ref|XP_004076110.1| PREDICTED: S-phase kinase-associated protein 1-like isoform 1
[Oryzias latipes]
gi|54036436|sp|Q6PEC4.3|SKP1_RAT RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|54036535|sp|Q9WTX5.3|SKP1_MOUSE RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|4322377|gb|AAD16036.1| SCF complex protein Skp1 [Mus musculus]
gi|12805297|gb|AAH02115.1| S-phase kinase-associated protein 1A [Mus musculus]
gi|12833361|dbj|BAB22496.1| unnamed protein product [Mus musculus]
gi|12846208|dbj|BAB27074.1| unnamed protein product [Mus musculus]
gi|12849283|dbj|BAB28281.1| unnamed protein product [Mus musculus]
gi|12851968|dbj|BAB29222.1| unnamed protein product [Mus musculus]
gi|26353324|dbj|BAC40292.1| unnamed protein product [Mus musculus]
gi|26388981|dbj|BAC25660.1| unnamed protein product [Mus musculus]
gi|34785630|gb|AAH58152.1| S-phase kinase-associated protein 1 [Rattus norvegicus]
gi|74220769|dbj|BAE31355.1| unnamed protein product [Mus musculus]
gi|74227677|dbj|BAE35688.1| unnamed protein product [Mus musculus]
gi|148701671|gb|EDL33618.1| mCG3634, isoform CRA_b [Mus musculus]
gi|149052538|gb|EDM04355.1| S-phase kinase-associated protein 1A, isoform CRA_a [Rattus
norvegicus]
gi|149052539|gb|EDM04356.1| S-phase kinase-associated protein 1A, isoform CRA_a [Rattus
norvegicus]
gi|209733274|gb|ACI67506.1| S-phase kinase-associated protein 1 [Salmo salar]
gi|221221226|gb|ACM09274.1| S-phase kinase-associated protein 1 [Salmo salar]
gi|221221806|gb|ACM09564.1| S-phase kinase-associated protein 1 [Salmo salar]
gi|225703580|gb|ACO07636.1| S-phase kinase-associated protein 1A [Oncorhynchus mykiss]
gi|225704136|gb|ACO07914.1| S-phase kinase-associated protein 1A [Oncorhynchus mykiss]
gi|229367476|gb|ACQ58718.1| S-phase kinase-associated protein 1 [Anoplopoma fimbria]
gi|303661333|gb|ADM16030.1| S-phase kinase-associated protein 1 [Salmo salar]
Length = 163
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|281348685|gb|EFB24269.1| hypothetical protein PANDA_000748 [Ailuropoda melanoleuca]
gi|329009637|gb|AEB71438.1| S-phase kinase-associated protein 1 [Bubalus bubalis]
Length = 153
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|25777713|ref|NP_733779.1| S-phase kinase-associated protein 1 isoform b [Homo sapiens]
gi|57525011|ref|NP_001006153.1| S-phase kinase-associated protein 1 [Gallus gallus]
gi|62858085|ref|NP_001016519.1| S-phase kinase-associated protein 1 [Xenopus (Silurana)
tropicalis]
gi|77736509|ref|NP_001029953.1| S-phase kinase-associated protein 1 [Bos taurus]
gi|148222166|ref|NP_001080844.1| S-phase kinase-associated protein 1 [Xenopus laevis]
gi|197102692|ref|NP_001127637.1| S-phase kinase-associated protein 1 [Pongo abelii]
gi|221307461|ref|NP_001138250.1| S-phase kinase-associated protein 1 [Ovis aries]
gi|290491216|ref|NP_001166486.1| S-phase kinase-associated protein 1 [Cavia porcellus]
gi|302191665|ref|NP_001180519.1| s-phase kinase-associated protein 1 [Macaca mulatta]
gi|356991212|ref|NP_001239337.1| S-phase kinase-associated protein 1 [Canis lupus familiaris]
gi|114601687|ref|XP_001166401.1| PREDICTED: S-phase kinase-associated protein 1 isoform 10 [Pan
troglodytes]
gi|126290083|ref|XP_001365828.1| PREDICTED: s-phase kinase-associated protein 1-like isoform 1
[Monodelphis domestica]
gi|149726363|ref|XP_001504454.1| PREDICTED: s-phase kinase-associated protein 1-like isoform 1
[Equus caballus]
gi|224068094|ref|XP_002189695.1| PREDICTED: S-phase kinase-associated protein 1 [Taeniopygia
guttata]
gi|291387330|ref|XP_002710256.1| PREDICTED: S-phase kinase-associated protein 1 [Oryctolagus
cuniculus]
gi|301754283|ref|XP_002912957.1| PREDICTED: s-phase kinase-associated protein 1-like isoform 1
[Ailuropoda melanoleuca]
gi|301754285|ref|XP_002912958.1| PREDICTED: s-phase kinase-associated protein 1-like isoform 2
[Ailuropoda melanoleuca]
gi|326928695|ref|XP_003210511.1| PREDICTED: s-phase kinase-associated protein 1-like [Meleagris
gallopavo]
gi|327265292|ref|XP_003217442.1| PREDICTED: s-phase kinase-associated protein 1-like [Anolis
carolinensis]
gi|332234464|ref|XP_003266427.1| PREDICTED: S-phase kinase-associated protein 1 [Nomascus
leucogenys]
gi|332234468|ref|XP_003266429.1| PREDICTED: S-phase kinase-associated protein 1 [Nomascus
leucogenys]
gi|332821933|ref|XP_003310870.1| PREDICTED: S-phase kinase-associated protein 1 [Pan troglodytes]
gi|334310955|ref|XP_003339559.1| PREDICTED: s-phase kinase-associated protein 1-like isoform 2
[Monodelphis domestica]
gi|344264928|ref|XP_003404541.1| PREDICTED: S-phase kinase-associated protein 1-like [Loxodonta
africana]
gi|354472619|ref|XP_003498535.1| PREDICTED: S-phase kinase-associated protein 1-like [Cricetulus
griseus]
gi|390459642|ref|XP_002744631.2| PREDICTED: S-phase kinase-associated protein 1-like [Callithrix
jacchus]
gi|395504337|ref|XP_003756510.1| PREDICTED: S-phase kinase-associated protein 1 [Sarcophilus
harrisii]
gi|395817564|ref|XP_003782238.1| PREDICTED: S-phase kinase-associated protein 1 [Otolemur
garnettii]
gi|397518295|ref|XP_003829328.1| PREDICTED: S-phase kinase-associated protein 1 isoform 1 [Pan
paniscus]
gi|402872507|ref|XP_003900151.1| PREDICTED: S-phase kinase-associated protein 1 isoform 1 [Papio
anubis]
gi|402872509|ref|XP_003900152.1| PREDICTED: S-phase kinase-associated protein 1 isoform 2 [Papio
anubis]
gi|402872511|ref|XP_003900153.1| PREDICTED: S-phase kinase-associated protein 1 isoform 3 [Papio
anubis]
gi|402891506|ref|XP_003908987.1| PREDICTED: S-phase kinase-associated protein 1-like [Papio
anubis]
gi|410039706|ref|XP_003950674.1| PREDICTED: S-phase kinase-associated protein 1 [Pan troglodytes]
gi|426349964|ref|XP_004042554.1| PREDICTED: S-phase kinase-associated protein 1 [Gorilla gorilla
gorilla]
gi|426349966|ref|XP_004042555.1| PREDICTED: S-phase kinase-associated protein 1 [Gorilla gorilla
gorilla]
gi|426349972|ref|XP_004042558.1| PREDICTED: S-phase kinase-associated protein 1 [Gorilla gorilla
gorilla]
gi|441596698|ref|XP_004087328.1| PREDICTED: S-phase kinase-associated protein 1 [Nomascus
leucogenys]
gi|441596701|ref|XP_004087329.1| PREDICTED: S-phase kinase-associated protein 1 [Nomascus
leucogenys]
gi|441596707|ref|XP_004087330.1| PREDICTED: S-phase kinase-associated protein 1 [Nomascus
leucogenys]
gi|52783797|sp|P63208.2|SKP1_HUMAN RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=Organ of Corti protein 2; Short=OCP-2; AltName:
Full=Organ of Corti protein II; Short=OCP-II; AltName:
Full=RNA polymerase II elongation factor-like protein;
AltName: Full=SIII; AltName: Full=Transcription
elongation factor B; AltName: Full=p19A; AltName:
Full=p19skp1
gi|52783798|sp|P63209.2|SKP1_CAVPO RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=Organ of Corti protein 2; Short=OCP-2; AltName:
Full=Organ of Corti protein II; Short=OCP-II; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|54036497|sp|Q71U00.3|SKP1_XENLA RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|75041041|sp|Q5R512.1|SKP1_PONAB RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|75075982|sp|Q4R5B9.1|SKP1_MACFA RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|82082106|sp|Q5ZKF5.1|SKP1_CHICK RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|122140924|sp|Q3ZCF3.1|SKP1_BOVIN RecName: Full=S-phase kinase-associated protein 1; AltName:
Full=Cyclin-A/CDK2-associated protein p19; AltName:
Full=S-phase kinase-associated protein 1A; AltName:
Full=p19A; AltName: Full=p19skp1
gi|6503025|gb|AAF14553.1|AF176352_1 SCF complex protein [Xenopus laevis]
gi|7648675|gb|AAF65619.1|AF169342_1 Skp1 [Xenopus laevis]
gi|599693|emb|CAA84618.1| OCP-II protein [Cavia porcellus]
gi|860990|emb|CAA87392.1| RNA polymerase II elongation factor-like protein [Homo sapiens]
gi|995824|gb|AAC50241.1| cyclin A/CDK2-associated p19 [Homo sapiens]
gi|14602642|gb|AAH09839.1| S-phase kinase-associated protein 1 [Homo sapiens]
gi|18089150|gb|AAH20798.1| S-phase kinase-associated protein 1 [Homo sapiens]
gi|32450098|gb|AAH54184.1| Skp1a-prov protein [Xenopus laevis]
gi|41350872|gb|AAH65730.1| S-phase kinase-associated protein 1 [Homo sapiens]
gi|53131063|emb|CAG31788.1| hypothetical protein RCJMB04_11c19 [Gallus gallus]
gi|55732933|emb|CAH93154.1| hypothetical protein [Pongo abelii]
gi|67970728|dbj|BAE01706.1| unnamed protein product [Macaca fascicularis]
gi|73586968|gb|AAI02436.1| S-phase kinase-associated protein 1 [Bos taurus]
gi|89267388|emb|CAJ83056.1| S-phase kinase-associated protein 1A (p19A) [Xenopus (Silurana)
tropicalis]
gi|119582675|gb|EAW62271.1| S-phase kinase-associated protein 1A (p19A), isoform CRA_b [Homo
sapiens]
gi|119582680|gb|EAW62276.1| S-phase kinase-associated protein 1A (p19A), isoform CRA_b [Homo
sapiens]
gi|119936546|gb|ABM06147.1| S-phase kinase-associated protein 1A [Bos taurus]
gi|167774211|gb|ABZ92540.1| transcription elongation factor B (SIII), polypeptide 1
pseudogene [synthetic construct]
gi|168279039|dbj|BAG11399.1| S-phase kinase-associated protein 1A [synthetic construct]
gi|187475966|gb|ACD12517.1| S-phase kinase-associated protein 1A [Ovis aries]
gi|190689545|gb|ACE86547.1| S-phase kinase-associated protein 1 protein [synthetic construct]
gi|296485349|tpg|DAA27464.1| TPA: S-phase kinase-associated protein 1 [Bos taurus]
gi|344246920|gb|EGW03024.1| S-phase kinase-associated protein 1 [Cricetulus griseus]
gi|351707753|gb|EHB10672.1| S-phase kinase-associated protein 1 [Heterocephalus glaber]
gi|383408903|gb|AFH27665.1| S-phase kinase-associated protein 1 isoform b [Macaca mulatta]
gi|384943166|gb|AFI35188.1| S-phase kinase-associated protein 1 isoform b [Macaca mulatta]
gi|387018790|gb|AFJ51513.1| S-phase kinase-associated protein 1-like [Crotalus adamanteus]
gi|387540704|gb|AFJ70979.1| S-phase kinase-associated protein 1 isoform b [Macaca mulatta]
gi|410208896|gb|JAA01667.1| S-phase kinase-associated protein 1 [Pan troglodytes]
gi|410256756|gb|JAA16345.1| S-phase kinase-associated protein 1 [Pan troglodytes]
gi|410305626|gb|JAA31413.1| S-phase kinase-associated protein 1 [Pan troglodytes]
gi|410332595|gb|JAA35244.1| S-phase kinase-associated protein 1 [Pan troglodytes]
gi|440910464|gb|ELR60260.1| S-phase kinase-associated protein 1 [Bos grunniens mutus]
gi|444517228|gb|ELV11423.1| S-phase kinase-associated protein 1 [Tupaia chinensis]
gi|449267209|gb|EMC78175.1| S-phase kinase-associated protein 1 [Columba livia]
gi|1583223|prf||2120310A RNA polymerase II elongation factor
Length = 163
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|225703892|gb|ACO07792.1| S-phase kinase-associated protein 1A [Oncorhynchus mykiss]
Length = 163
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|55731584|emb|CAH92499.1| hypothetical protein [Pongo abelii]
Length = 163
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKAMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|109122438|ref|XP_001094634.1| PREDICTED: s-phase kinase-associated protein 1-like [Macaca
mulatta]
Length = 163
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|410948174|ref|XP_003980816.1| PREDICTED: S-phase kinase-associated protein 1 [Felis catus]
Length = 177
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 20 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 79
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 80 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 110
>gi|318082871|ref|NP_001187838.1| S-phase kinase-associated protein 1 [Ictalurus punctatus]
gi|308324108|gb|ADO29189.1| s-phase kinase-associated protein 1 [Ictalurus punctatus]
Length = 163
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEMFEMDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|119582677|gb|EAW62273.1| S-phase kinase-associated protein 1A (p19A), isoform CRA_c [Homo
sapiens]
Length = 157
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 17 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 76
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 77 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 107
>gi|25777711|ref|NP_008861.2| S-phase kinase-associated protein 1 isoform a [Homo sapiens]
gi|19344004|gb|AAH25673.1| S-phase kinase-associated protein 1 [Homo sapiens]
gi|119582674|gb|EAW62270.1| S-phase kinase-associated protein 1A (p19A), isoform CRA_a [Homo
sapiens]
gi|119582676|gb|EAW62272.1| S-phase kinase-associated protein 1A (p19A), isoform CRA_a [Homo
sapiens]
gi|123981218|gb|ABM82438.1| S-phase kinase-associated protein 1A (p19A) [synthetic construct]
gi|123996055|gb|ABM85629.1| S-phase kinase-associated protein 1A (p19A) [synthetic construct]
Length = 160
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|82407879|pdb|2ASS|A Chain A, Crystal Structure Of The Skp1-Skp2-Cks1 Complex
gi|82407882|pdb|2AST|A Chain A, Crystal Structure Of Skp1-Skp2-Cks1 In Complex With A
P27 Peptide
Length = 159
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 5 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 64
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 65 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 95
>gi|387915052|gb|AFK11135.1| s-phase kinase-associated protein 1-like isoform 5 [Callorhinchus
milii]
gi|392881616|gb|AFM89640.1| s-phase kinase-associated protein 1-like isoform 5 [Callorhinchus
milii]
Length = 163
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSITIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 RDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|90075782|dbj|BAE87571.1| unnamed protein product [Macaca fascicularis]
Length = 163
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ DD+ WD + +KVD
Sbjct: 66 KDDPPPPGDDENKEKRTDDIPVWDQEFLKVD 96
>gi|383408901|gb|AFH27664.1| S-phase kinase-associated protein 1 isoform a [Macaca mulatta]
Length = 160
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|426263312|emb|CCG34076.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 164
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEA--SMFDDLATTSIDDDLKAWDADLVKVD 72
IPLPNVT KI K I YC H+E ++ DD+ WD D KVD
Sbjct: 46 IPLPNVTGKILEKIITYCKYHNEHPDPPSEEKKDEKRTDDIIPWDQDFCKVD 97
>gi|291413890|ref|XP_002723199.1| PREDICTED: S-phase kinase-associated protein 1 isoform 2
[Oryctolagus cuniculus]
Length = 168
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|397491251|ref|XP_003816586.1| PREDICTED: S-phase kinase-associated protein 1-like [Pan paniscus]
Length = 200
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 24/93 (25%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SS GE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 43 LQSSGGEIFEVDVEIVKQSVTIKTILEDLGMNDEGDHDPVPLPNVNAAILKKVIQWCTHH 102
Query: 44 DE----ASMFDDLATTSIDDDLKAWDADLVKVD 72
++ ++++ + DD+ WD + +KVD
Sbjct: 103 EDDPPPPKVYENKEKRT--DDIPVWDQEFLKVD 133
>gi|380026589|ref|XP_003697030.1| PREDICTED: S-phase kinase-associated protein 1-like [Apis florea]
Length = 216
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVFE + +D +D +PLPNV I K I++ H
Sbjct: 60 LQSSDGEVFEVDVDIAKCSVTIKTMLEDLGMDEDEEEVVPLPNVNSAILRKVIQWATYHK 119
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 120 DDPPPPEDDENKEKRTDDISSWDADFLKVD 149
>gi|119582679|gb|EAW62275.1| S-phase kinase-associated protein 1A (p19A), isoform CRA_e [Homo
sapiens]
Length = 159
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|194912014|ref|XP_001982419.1| GG12805 [Drosophila erecta]
gi|190648095|gb|EDV45388.1| GG12805 [Drosophila erecta]
Length = 162
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDESKEKRTDDIISWDADFLKVD 95
>gi|168009592|ref|XP_001757489.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691183|gb|EDQ77546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWD 65
+ E +MI+D I +PNV+ I K ++YC+ H E D D ++ WD
Sbjct: 25 ESETLRNMIQDTGTNVPISIPNVSSDILAKVLEYCSYHAETMETHDDKPPITDAQIREWD 84
Query: 66 ADLVKV 71
AD V V
Sbjct: 85 ADFVDV 90
>gi|119582678|gb|EAW62274.1| S-phase kinase-associated protein 1A (p19A), isoform CRA_d [Homo
sapiens]
Length = 168
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|126002085|ref|XP_001352258.1| GA14255 [Drosophila pseudoobscura pseudoobscura]
gi|54640549|gb|EAL29385.1| GA14255 [Drosophila pseudoobscura pseudoobscura]
Length = 162
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDESKEKRTDDIISWDADFLKVD 95
>gi|17137600|ref|NP_477390.1| skpA, isoform A [Drosophila melanogaster]
gi|24638934|ref|NP_726690.1| skpA, isoform B [Drosophila melanogaster]
gi|24638936|ref|NP_726691.1| skpA, isoform C [Drosophila melanogaster]
gi|24638938|ref|NP_726692.1| skpA, isoform D [Drosophila melanogaster]
gi|24638940|ref|NP_726693.1| skpA, isoform E [Drosophila melanogaster]
gi|24638942|ref|NP_726694.1| skpA, isoform F [Drosophila melanogaster]
gi|24638944|ref|NP_726695.1| skpA, isoform G [Drosophila melanogaster]
gi|85724772|ref|NP_001033818.1| skpA, isoform H [Drosophila melanogaster]
gi|195347434|ref|XP_002040258.1| GM19084 [Drosophila sechellia]
gi|195564469|ref|XP_002105840.1| GD16521 [Drosophila simulans]
gi|7620599|gb|AAF64674.1|AF220066_1 SKPA [Drosophila melanogaster]
gi|3645988|emb|CAA20889.1| EG:115C2.4 [Drosophila melanogaster]
gi|7290072|gb|AAF45538.1| skpA, isoform A [Drosophila melanogaster]
gi|7290073|gb|AAF45539.1| skpA, isoform B [Drosophila melanogaster]
gi|7290074|gb|AAF45540.1| skpA, isoform F [Drosophila melanogaster]
gi|10728359|gb|AAG22362.1| skpA, isoform D [Drosophila melanogaster]
gi|17861930|gb|AAL39442.1| HL01263p [Drosophila melanogaster]
gi|22831437|gb|AAN09024.1| skpA, isoform C [Drosophila melanogaster]
gi|22831438|gb|AAN09025.1| skpA, isoform E [Drosophila melanogaster]
gi|22831439|gb|AAN09026.1| skpA, isoform G [Drosophila melanogaster]
gi|84798369|gb|ABC67161.1| skpA, isoform H [Drosophila melanogaster]
gi|194121686|gb|EDW43729.1| GM19084 [Drosophila sechellia]
gi|194203202|gb|EDX16778.1| GD16521 [Drosophila simulans]
gi|220942842|gb|ACL83964.1| skpA-PA [synthetic construct]
gi|255958354|gb|ACU43544.1| SD13881p [Drosophila melanogaster]
gi|256000827|gb|ACU51754.1| RH26825p [Drosophila melanogaster]
Length = 162
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDESKEKRTDDIISWDADFLKVD 95
>gi|67970174|dbj|BAE01431.1| unnamed protein product [Macaca fascicularis]
Length = 132
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|195168768|ref|XP_002025202.1| GL13359 [Drosophila persimilis]
gi|195168770|ref|XP_002025203.1| GL13358 [Drosophila persimilis]
gi|195176233|ref|XP_002028717.1| GL14141 [Drosophila persimilis]
gi|194108658|gb|EDW30701.1| GL13359 [Drosophila persimilis]
gi|194108659|gb|EDW30702.1| GL13358 [Drosophila persimilis]
gi|194111696|gb|EDW33739.1| GL14141 [Drosophila persimilis]
Length = 162
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDESKEKRTDDIISWDADFLKVD 95
>gi|195439068|ref|XP_002067453.1| GK16428 [Drosophila willistoni]
gi|194163538|gb|EDW78439.1| GK16428 [Drosophila willistoni]
Length = 162
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDESKEKRTDDIISWDADFLKVD 95
>gi|358334132|dbj|GAA30583.2| S-phase kinase-associated protein 1 [Clonorchis sinensis]
Length = 138
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+PLPNV I K I++C H D DD DD+ +WD + ++VD
Sbjct: 20 VPLPNVNAGILRKVIQWCTYHRDDPPPQEDDENKERRTDDIPSWDQEFLRVD 71
>gi|296204468|ref|XP_002749360.1| PREDICTED: S-phase kinase-associated protein 1-like [Callithrix
jacchus]
Length = 207
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV + K I++C H
Sbjct: 50 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAVLKKVIQWCTHH 109
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 110 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 140
>gi|157093097|gb|ABV22203.1| skp1 family protein [Karlodinium micrum]
Length = 164
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDE--- 45
LKSS GE+FE +M++D + IPLPNV I K I YC H +
Sbjct: 10 LKSSQGEIFEVEPEVACMSTLIKNMVDDSGTDEEIPLPNVKTAILSKVIDYCKYHKDNPP 69
Query: 46 ASMFDDLATTSIDD-DLKAWDADLVKVD 72
+ L +T++ + + WD++ V ++
Sbjct: 70 EEIQKPLKSTNLMECGVCEWDSEYVNIE 97
>gi|340728686|ref|XP_003402649.1| PREDICTED: s-phase kinase-associated protein 1-like [Bombus
terrestris]
Length = 229
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVFE + +D +D +PLPNV I K I++ H
Sbjct: 73 LQSSDGEVFEVDVDIAKCSVTIKTMLEDLGMDEDEEEVVPLPNVNSAILRKVIQWATYHK 132
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 133 DDPPPPEDDENKEKRTDDISSWDADFLKVD 162
>gi|149052540|gb|EDM04357.1| S-phase kinase-associated protein 1A, isoform CRA_b [Rattus
norvegicus]
Length = 160
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|66504030|ref|XP_392758.2| PREDICTED: s-phase kinase-associated protein 1 isoform 1 [Apis
mellifera]
gi|350415782|ref|XP_003490750.1| PREDICTED: S-phase kinase-associated protein 1-like [Bombus
impatiens]
Length = 162
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 21/91 (23%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGEVFE M+ED +D +PLPNV I K I++ H
Sbjct: 6 LQSSDGEVFEVDVDIAKCSVTIKTMLED-LGMDEDEEEVVPLPNVNSAILRKVIQWATYH 64
Query: 44 DEASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 65 KDDPPPPEDDENKEKRTDDISSWDADFLKVD 95
>gi|383851886|ref|XP_003701462.1| PREDICTED: S-phase kinase-associated protein 1-like [Megachile
rotundata]
Length = 162
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 21/91 (23%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGEVFE M+ED +D +PLPNV I K I++ H
Sbjct: 6 LQSSDGEVFEVDVDIAKCSVTIKTMLED-LGMDEDEEEVVPLPNVNSAILRKVIQWATYH 64
Query: 44 DEASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 65 KDDPPPPEDDENKEKRTDDISSWDADFLKVD 95
>gi|325303672|tpg|DAA34559.1| TPA_exp: SCF ubiquitin ligase Skp1 component [Amblyomma
variegatum]
Length = 162
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVFE +E +D +D +PLPNV I K I + H
Sbjct: 6 LQSSDGEVFEVDVEIAKASVTIKTMLEDLGMDEDEDEVVPLPNVNSAILKKVIHWATYHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 66 DDPPPPEDDENKEKRTDDISSWDADFLKVD 95
>gi|291384304|ref|XP_002708755.1| PREDICTED: S-phase kinase-associated protein 1 isoform 1
[Oryctolagus cuniculus]
Length = 163
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQGFLKVD 96
>gi|218200055|gb|EEC82482.1| hypothetical protein OsI_26936 [Oryza sativa Indica Group]
Length = 177
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 12 HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLV 69
++I+D CA D IPLPNV K K I YC++H A+ D + L +DAD V
Sbjct: 50 NLIDDGCA-DVIPLPNVDSKTLAKVIPYCDEHGRANSGTDEERAA----LGRFDADFV 102
>gi|195469553|ref|XP_002099702.1| skpA [Drosophila yakuba]
gi|194187226|gb|EDX00810.1| skpA [Drosophila yakuba]
Length = 162
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPSEDDESKEKRTDDIISWDADFLKVD 95
>gi|38048021|gb|AAR09913.1| similar to Drosophila melanogaster skpA, partial [Drosophila
yakuba]
Length = 159
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 66 DDPQPSEDDESKEKRTDDIISWDADFLKVD 95
>gi|41152201|ref|NP_957037.1| S-phase kinase-associated protein 1 [Danio rerio]
gi|37748746|gb|AAH59536.1| S-phase kinase-associated protein 1 [Danio rerio]
gi|49619153|gb|AAT68161.1| S-phase kinase-associated protein 1A [Danio rerio]
Length = 163
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|225465020|ref|XP_002265139.1| PREDICTED: SKP1-like protein 4 [Vitis vinifera]
Length = 152
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 2 LKSSDGEVFE---------HMIE---DDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEASM 48
LKSSDG +F H I+ +D D + LP V K K ++YC KH E S
Sbjct: 7 LKSSDGHIFTVEEAVALKCHTIKNVVEDTGDDEVLLPKVNGKTLAKVMEYCEKHVKEPSG 66
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D D++K WD + V VD
Sbjct: 67 LDQKEV----DEMKKWDMEFVDVD 86
>gi|308322065|gb|ADO28170.1| s-phase kinase-associated protein 1 [Ictalurus furcatus]
Length = 163
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|90103333|gb|ABD85511.1| S-phase kinase-associated protein 1a [Ictalurus punctatus]
Length = 153
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|194755068|ref|XP_001959814.1| GF11848 [Drosophila ananassae]
gi|190621112|gb|EDV36636.1| GF11848 [Drosophila ananassae]
Length = 179
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 28/99 (28%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNK 42
L+SSDGEVF ++IED C ++ IPLPNV I K + + N
Sbjct: 5 QLQSSDGEVFNIDSETAKCSSTIRNLIED-CGLESEENPLIPLPNVNSTILSKVLIWANH 63
Query: 43 H--------DEASMFDDL-ATTSIDDDLKAWDADLVKVD 72
H +E S D+ A D + AWDA+ + VD
Sbjct: 64 HRAEKAEKTEENSGKDEASAVVRSSDVISAWDAEFLTVD 102
>gi|13434998|gb|AAK26104.1|AF132729_1 SKP1-like protein ASK10, partial [Arabidopsis thaliana]
Length = 166
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED------DCAVDRIPLPNVTIKIFYKAIKYCNK 42
L SSDGE FE M+ D D +D +PL NV I K + +C
Sbjct: 10 LTSSDGETFEVERDVIALSTTLNTMMMDLGLDNADAEMDAVPLQNVAGPILRKVLLWCTS 69
Query: 43 H-DEASMFDDLATTSIDDDLKAWDADLVKVD 72
H D+ DD DD+ +WD + +KVD
Sbjct: 70 HKDDPPSADDDNREKRTDDIPSWDVEFLKVD 100
>gi|294718623|gb|ADF32024.1| S-phase kinase-associated protein 1 [Eriocheir sinensis]
Length = 162
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDG+ F+ +E +D +D +PLPNV I K I++C H
Sbjct: 6 LQSSDGDTFDVDVEIAKQSVTIKTMLEDLGMDEDEEEVVPLPNVNAAILKKVIQWCTYHK 65
Query: 45 EASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ D DD+ +WDAD +KVD
Sbjct: 66 DDPPLPDDDDNKEKRTDDISSWDADFLKVD 95
>gi|291384306|ref|XP_002708756.1| PREDICTED: S-phase kinase-associated protein 1 isoform 2
[Oryctolagus cuniculus]
Length = 168
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQGFLKVD 96
>gi|125559230|gb|EAZ04766.1| hypothetical protein OsI_26931 [Oryza sativa Indica Group]
Length = 225
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 19/78 (24%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEAS 47
L+SSDGE + ++I+D + IPLP+V+ K K ++YC+KH DE S
Sbjct: 107 LESSDGEAVKVKEASARLSKTIGNIIDDGRGDEAIPLPDVSYKTLKKVVEYCDKHADEKS 166
Query: 48 MFDDLATTSIDDDLKAWD 65
D+ ++LK WD
Sbjct: 167 DTDEQK-----EELKNWD 179
>gi|195179486|ref|XP_002029111.1| GL15335 [Drosophila persimilis]
gi|194108647|gb|EDW30690.1| GL15335 [Drosophila persimilis]
Length = 162
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPQPTEDDECKEKRTDDIISWDADFLKVD 95
>gi|194763226|ref|XP_001963734.1| GF21176 [Drosophila ananassae]
gi|190618659|gb|EDV34183.1| GF21176 [Drosophila ananassae]
Length = 248
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ I+ +DC ++ +PLPNV I K + + + H
Sbjct: 7 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLIWAHYHK 66
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD + DD+ +WDAD +KVD
Sbjct: 67 DDPQPTEDDESKEKRTDDIISWDADFLKVD 96
>gi|222637491|gb|EEE67623.1| hypothetical protein OsJ_25193 [Oryza sativa Japonica Group]
Length = 254
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 12 HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLV 69
++I+D CA D IPLPNV K K I YC++H A+ D + L +DAD V
Sbjct: 48 NLIDDGCA-DVIPLPNVDSKTLAKVIPYCDEHGRANSGTDEERAA----LGRFDADFV 100
>gi|357607274|gb|EHJ65429.1| S-phase kinase-associated protein [Danaus plexippus]
Length = 162
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE-----------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ +E DD + +PLPNV I K I++ H
Sbjct: 6 LQSSDNEIFDVDVEIAKCSVTIKTMLEDLGMDDDEEEVVPLPNVNSAILKKVIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPLPEDDENKEKRTDDISSWDADFLKVD 95
>gi|225460747|ref|XP_002273625.1| PREDICTED: SKP1-like protein 11-like [Vitis vinifera]
Length = 151
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 22/85 (25%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEAS 47
L+SSDGE+F ++++ED VD IP+P V + K ++YC KH
Sbjct: 9 LRSSDGELFIIDRAVALQSRTIQYVLEDTNPVDAFIPVPAVDARTLSKVLEYCKKH---- 64
Query: 48 MFDDLATTSIDDDLKAWDADLVKVD 72
L + D D WD D V V+
Sbjct: 65 ----LIDLNTDFDYSEWDKDFVDVE 85
>gi|17508715|ref|NP_492513.1| Protein SKR-1 [Caenorhabditis elegans]
gi|3877216|emb|CAB03110.1| Protein SKR-1 [Caenorhabditis elegans]
Length = 176
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 15 EDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
E+ + IP+ NVT I K I +CN H D S D DD+ +WD + +KVD
Sbjct: 51 EEGTNAEPIPVQNVTASILKKVISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVD 110
>gi|389608869|dbj|BAM18046.1| skpA protein [Papilio xuthus]
Length = 162
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE-----------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSD E+F+ +E DD + +PLPNV I K I++ H
Sbjct: 6 LQSSDNEIFDVDVEIAKCSVTIKTMLEDLGMDDDEEEVVPLPNVNSAILKKVIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPLPEDDENKEKRTDDISSWDADFLKVD 95
>gi|17027126|gb|AAL34093.1| SKR-1 [Caenorhabditis elegans]
Length = 170
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 15 EDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
E+ + IP+ NVT I K I +CN H D S D DD+ +WD + +KVD
Sbjct: 45 EEGTNAEPIPVQNVTASILKKVISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVD 104
>gi|225465018|ref|XP_002265068.1| PREDICTED: SKP1-like protein 4 [Vitis vinifera]
gi|147801012|emb|CAN60120.1| hypothetical protein VITISV_016376 [Vitis vinifera]
Length = 152
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Query: 2 LKSSDGEVFE---------HMIE---DDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEASM 48
LKSSDG +F H I +D D + LP V + K ++YC KH E S
Sbjct: 7 LKSSDGHIFTVEEAVALKCHTIRNVVEDTGDDEVLLPKVNGRTLAKVMEYCEKHAKEPSG 66
Query: 49 FDDLATTSIDDDLKAWDADLVKVD 72
D D++K WD + V VD
Sbjct: 67 LDQKEV----DEMKKWDMEFVDVD 86
>gi|397567172|gb|EJK45434.1| hypothetical protein THAOC_35953 [Thalassiosira oceanica]
Length = 353
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMFDDLAT----TSIDDDLKAWDADLVKVD 72
IPLPNV + K I+YC + + + T + I++ ++ W A+ VKVD
Sbjct: 228 IPLPNVKSPVLEKVIEYCTHYKQVEPMTQITTPLKSSKIEETVQEWYAEFVKVD 281
>gi|22093771|dbj|BAC07062.1| putative Skp1(S-phase kinase-associated protein1) [Oryza sativa
Japonica Group]
Length = 246
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 12 HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLV 69
++I+D CA D IPLPNV K K I YC++H A+ D + L +DAD V
Sbjct: 48 NLIDDGCA-DVIPLPNVDSKTLAKVIPYCDEHGRANSGTDEERAA----LGRFDADFV 100
>gi|164656623|ref|XP_001729439.1| hypothetical protein MGL_3474 [Malassezia globosa CBS 7966]
gi|159103330|gb|EDP42225.1| hypothetical protein MGL_3474 [Malassezia globosa CBS 7966]
Length = 120
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDR-IPLPNVTIKIFYKAIKYC--NKHD 44
+L +SD E F + MIED D+ IPLPNV+ + K ++YC ++HD
Sbjct: 3 LLTTSDNEHFTVDRDVAERSVLIKQMIEDIGETDQPIPLPNVSSSVLTKVLEYCSHHRHD 62
Query: 45 EASMFDDL-ATTSIDDDLKAWDADLVKVD 72
DD D+ WDA ++VD
Sbjct: 63 PPVPADDTDEMRRRATDISEWDAKFIQVD 91
>gi|156389287|ref|XP_001634923.1| predicted protein [Nematostella vectensis]
gi|156222011|gb|EDO42860.1| predicted protein [Nematostella vectensis]
Length = 162
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE-------------HMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE+FE M+ED + D +PLPNV I K I++ +H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDEDDDDAVPLPNVNAAILKKVIQWATRHK 65
Query: 45 EASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ D DD++ WD + +KVD
Sbjct: 66 DDPPPPDDDENKEKRTDDIEPWDQEFLKVD 95
>gi|388582764|gb|EIM23068.1| SconCp [Wallemia sebi CBS 633.66]
Length = 165
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 13/73 (17%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATT--SIDD------ 59
+ ++M+ED D IPLPNVT +F K ++YC+ H + D L ++ S DD
Sbjct: 30 LIKNMLEDIGESDHPIPLPNVTSNVFKKVLEYCDHHRK----DPLPSSDESADDSRKRTT 85
Query: 60 DLKAWDADLVKVD 72
D+ WD ++VD
Sbjct: 86 DINEWDQKFIQVD 98
>gi|353237700|emb|CCA69667.1| related to SKP1-Kinetochore protein complex CBF3, subunit D
[Piriformospora indica DSM 11827]
Length = 175
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWD 65
+ E M+E+ A DR IPLPNVT + K ++YC H D +DD + S + WD
Sbjct: 25 LIEDMVEN--AGDRPIPLPNVTASVLRKILEYCEHHKNDPLPPYDD-GSRSRTTHISEWD 81
Query: 66 ADLVKVD 72
+ VD
Sbjct: 82 QKFITVD 88
>gi|348671892|gb|EGZ11712.1| hypothetical protein PHYSODRAFT_250765 [Phytophthora sojae]
Length = 163
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 20/88 (22%)
Query: 2 LKSSDGEVFE---------HMIEDDCA--------VDRIPLPNVTIKIFYKAIKYCNKHD 44
L S DGE FE +++ A V IPLPNV + K +++C H
Sbjct: 14 LVSMDGEAFEVDAKVAVMSQLVQTLVADEQEQGDEVQEIPLPNVKAHVLAKVVEFCQHHK 73
Query: 45 EASMFD---DLATTSIDDDLKAWDADLV 69
+A M + L + + + + WDA+ V
Sbjct: 74 DAPMAEIQKPLKSNVLSESVDEWDANFV 101
>gi|221221990|gb|ACM09656.1| S-phase kinase-associated protein 1 [Salmo salar]
Length = 163
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED + D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + D + WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDGIPVWDQEFLKVD 96
>gi|348677366|gb|EGZ17183.1| hypothetical protein PHYSODRAFT_354552 [Phytophthora sojae]
Length = 179
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 7 GEVFEHMIEDDC---AVDRIPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDD 60
E+ + +I DD V IPLPNV + K I++C+ H + M + L + + D
Sbjct: 41 SELVKTLISDDADDDEVQEIPLPNVKSPVLSKVIEFCSHHHNSPMREIEKPLKSADMHDV 100
Query: 61 LKAWDADLVKVD 72
+ WDA+ V ++
Sbjct: 101 VSDWDANFVDIE 112
>gi|20130299|ref|NP_611796.1| skpF [Drosophila melanogaster]
gi|7291582|gb|AAF47006.1| skpF [Drosophila melanogaster]
gi|21428638|gb|AAM49979.1| LP10147p [Drosophila melanogaster]
gi|220950238|gb|ACL87662.1| skpF-PA [synthetic construct]
gi|220960492|gb|ACL92782.1| skpF-PA [synthetic construct]
Length = 171
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE+FE IE +DC V+ IPLPNV I K + + H
Sbjct: 6 LQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHR 65
Query: 45 E--ASMFDDLATTSIDDDLKAWDADLVKVD 72
E A ++ A S+ + WDA+ + +D
Sbjct: 66 EDIAEENEEEAAKSVAVQITPWDAEFLSMD 95
>gi|325181007|emb|CCA15417.1| Skp1like protein putative [Albugo laibachii Nc14]
Length = 182
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 16 DDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLVKVD 72
DD + IPLPNV + + I++C+ H M D L ++ + + + WDA+ V V+
Sbjct: 56 DDQEIQEIPLPNVKSTVLSRVIEFCSHHLTNPMEDIDKPLKSSDMQEVVSEWDANFVDVE 115
>gi|114052370|ref|NP_001040518.1| S-phase kinase-associated protein [Bombyx mori]
gi|95102716|gb|ABF51299.1| S-phase kinase-associated protein [Bombyx mori]
Length = 162
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSD EVF + M+ED + + +PLPNV I K I++ H
Sbjct: 6 LQSSDNEVFVVDVEIAKCSVTIKTMLEDLGMEEDEEEVVPLPNVNSAILKKVIQWATYHK 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ +WDAD +KVD
Sbjct: 66 DDPPLPEDDENKEKRTDDISSWDADFLKVD 95
>gi|444709942|gb|ELW50937.1| S-phase kinase-associated protein 1 [Tupaia chinensis]
Length = 328
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE------------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDG +FE IED+ D +PLPNV IF K I++C H
Sbjct: 168 LQSSDGGIFEVDVEIAKQSVTIKPMLGDSGIEDEGDDDPVPLPNVNAAIFKKVIQWCTHH 227
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ D KVD
Sbjct: 228 KDDSPPPEDDENKLKRTDDIPVPDQGFPKVD 258
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE------------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDG +FE IED+ D + LPNV IF K I++C H
Sbjct: 3 LQSSDGGIFEVDVEIAKQSVTIKPMLGDSGIEDEGDDDPVHLPNVNAAIFKKVIQWCTHH 62
Query: 44 --DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D DD DD+ D KVD
Sbjct: 63 KDDSPPPEDDENKLKRTDDIPVPDQGFPKVD 93
>gi|357159710|ref|XP_003578534.1| PREDICTED: SKP1-like protein 4-like [Brachypodium distachyon]
Length = 171
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-----------DEASMFDDLAT 54
+ + ++MI++ C IPLPNV+ KI +YC+KH D + +
Sbjct: 29 ESQTIKNMIDEGCT-GIIPLPNVSSKILALVNEYCSKHVLARAAAGADGDAPADATAPTS 87
Query: 55 TSIDDDLKAWDADLVKVD 72
+ DD+L+++DA VKVD
Sbjct: 88 KAADDELESFDAGFVKVD 105
>gi|221222236|gb|ACM09779.1| S-phase kinase-associated protein 1 [Salmo salar]
Length = 163
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYC--N 41
L+SSDGE+FE +E D+ D +PLPNV I K I++C
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHR 65
Query: 42 KHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
K D DD DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|389612613|dbj|BAM19734.1| skpA protein [Papilio xuthus]
Length = 76
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 9 VFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDA 66
+ E + DD + +PLPNV I K I++ H D DD DD+ +WDA
Sbjct: 1 MLEDLGMDDDEEEVVPLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDA 60
Query: 67 DLVKVD 72
D +KVD
Sbjct: 61 DFLKVD 66
>gi|443900342|dbj|GAC77668.1| SCF ubiquitin ligase, Skp1 component [Pseudozyma antarctica T-34]
Length = 621
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKH--DEASMFDDLA-----TTSIDDD 60
+ + M+ED ++ IPLPNV+ + K ++YC+ H D + DD TT I D
Sbjct: 77 LIKQMLEDIGDTEQPIPLPNVSSNVLKKVLEYCSHHRSDPPAPADDAEESRRRTTDISD- 135
Query: 61 LKAWDADLVKVD 72
WDA ++VD
Sbjct: 136 ---WDAKFIQVD 144
>gi|403306052|ref|XP_003943560.1| PREDICTED: S-phase kinase-associated protein 1-like isoform 1
[Saimiri boliviensis boliviensis]
gi|403306054|ref|XP_003943561.1| PREDICTED: S-phase kinase-associated protein 1-like isoform 2
[Saimiri boliviensis boliviensis]
Length = 177
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVFEHMIE--------------DDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS 47
L+SSDGE+FE +E D+ + +PLPNV I K I++C H +
Sbjct: 24 LQSSDGEMFEVDMEIAKQSVTINTMGMDDEGDDNPVPLPNVNAAILKKVIQWCTHHKDDP 83
Query: 48 MFDDLATT--SIDDDLKAWDADLVKVD 72
+ D + WD + +KVD
Sbjct: 84 PPPEDDENKEKRTDGIPVWDQEFLKVD 110
>gi|219110175|ref|XP_002176839.1| s-phase kinase-associated protein [Phaeodactylum tricornutum CCAP
1055/1]
gi|217411374|gb|EEC51302.1| s-phase kinase-associated protein, partial [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 158
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 20 VDRIPLPNVTIKIFYKAIKYCNKHDEASMF---DDLATTSIDDDLKAWDADLVKV 71
V PLPNVT + K I++C E M L ++ ++D ++ W AD VKV
Sbjct: 36 VKDFPLPNVTSGVLEKVIEFCKHFQEEPMTTIQTPLKSSKLEDLVQQWYADFVKV 90
>gi|198418349|ref|XP_002127692.1| PREDICTED: similar to RNA polymerase II elongation factor [Ciona
intestinalis]
Length = 162
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+S DGE F +E +D VD +PLPNV I K I++C +H
Sbjct: 6 LQSHDGETFAVDVEIAKQSITIKTMLEDLGVDEDDEEGVPLPNVNAAILKKVIQWCTQHK 65
Query: 45 EASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 DDPPPPEDDENKEKRTDDIPVWDQEFLKVD 95
>gi|353237698|emb|CCA69665.1| probable negative regulator sulfur controller-3 [Piriformospora
indica DSM 11827]
Length = 161
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKH--------DEASMFDDLATTSIDD 59
+ ++M+ED D+ IPLPNVT + K ++YC+ H DE S + T+
Sbjct: 25 LIKNMLEDVGESDQPIPLPNVTAPVLRKVLEYCDHHQTDPLPTGDEPSADESRKRTT--- 81
Query: 60 DLKAWDADLVKVD 72
D+ WD + VD
Sbjct: 82 DISEWDQKFITVD 94
>gi|269784995|ref|NP_001161649.1| S-phase kinase associated protein 1-like protein [Saccoglossus
kowalevskii]
gi|268054303|gb|ACY92638.1| S-phase kinase associated protein 1-like protein [Saccoglossus
kowalevskii]
Length = 162
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE-------------HMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE+FE M+ED + D IPLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDEDDDDAIPLPNVNAAILKKVIQWCTHHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DDL +D + +KVD
Sbjct: 66 DDPPPPEDEENREKRTDDLSPYDIEFLKVD 95
>gi|410915100|ref|XP_003971025.1| PREDICTED: S-phase kinase-associated protein 1-like [Takifugu
rubripes]
gi|47205948|emb|CAF90394.1| unnamed protein product [Tetraodon nigroviridis]
gi|47221745|emb|CAG08799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 163
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDDGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|339522013|gb|AEJ84171.1| S-phase kinase-associated protein 1 [Capra hircus]
Length = 163
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED D +P PNV + K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMGDEGDDDPVPSPNVNAAVLKKVIQWCTHH 65
Query: 44 DEASMFDDLATTSID--DDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDEDKEKRTDDIPVWDQEFLKVD 96
>gi|91080327|ref|XP_974524.1| PREDICTED: similar to S-phase kinase-associated protein
[Tribolium castaneum]
gi|270006399|gb|EFA02847.1| S-phase kinase-associated protein 1 [Tribolium castaneum]
Length = 162
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDRI-----PLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE FE +E +D +D PLPNV I K I++ H
Sbjct: 6 LRSSDGETFEVDVEIAKCSVTIKTMLEDLGMDEEEEEVVPLPNVNSAILKKVIQWSTYHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 66 DDPPPPEDDENKEKRTDDISSWDADFLKVD 95
>gi|195403201|ref|XP_002060183.1| GJ18483 [Drosophila virilis]
gi|194141027|gb|EDW57453.1| GJ18483 [Drosophila virilis]
Length = 150
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSDGE+FE ++ +DC +D +PL NV+ I + H
Sbjct: 6 LQSSDGEIFETDVQAAKCSITIKTMLEDCGLDEDDNAVVPLSNVSSNTLRNVIHWAEHHM 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLV-KVD 72
DE S+ DD A + + + +WD + + KVD
Sbjct: 66 DDEPSLDDDEAESLSNGMISSWDKEFISKVD 96
>gi|357470465|ref|XP_003605517.1| SKP1-like protein [Medicago truncatula]
gi|355506572|gb|AES87714.1| SKP1-like protein [Medicago truncatula]
Length = 137
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 9 VFEHMIEDDCA-VDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKA 63
+H+I ++CA + I + N T KI I+YC KH A +D L +TS D+K+
Sbjct: 2 TIKHLINNECANKNGITISNTTDKILAMFIEYCKKHVNAKSYDGLISTSNYLDIKS 57
>gi|343425507|emb|CBQ69042.1| probable negative regulator sulfur controller-3 [Sporisorium
reilianum SRZ2]
Length = 158
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKH--DEASMFDDL-ATTSIDDDLKAW 64
+ + M+ED D+ IPLPNV+ + K ++YC+ H D + DD + D+ W
Sbjct: 24 LIKQMLEDIGDTDQPIPLPNVSSNVLKKVLEYCSHHRSDPPAPADDAEESRRRTTDISDW 83
Query: 65 DADLVKVD 72
DA ++VD
Sbjct: 84 DAKFIQVD 91
>gi|242046356|ref|XP_002461049.1| hypothetical protein SORBIDRAFT_02g039840 [Sorghum bicolor]
gi|241924426|gb|EER97570.1| hypothetical protein SORBIDRAFT_02g039840 [Sorghum bicolor]
Length = 349
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 9 VFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEA 46
V MI++ CA IPLPNV + IKYC+KH A
Sbjct: 195 VLADMIDNGCAGGNIPLPNVDDRALATVIKYCDKHAAA 232
>gi|301120412|ref|XP_002907933.1| S-phase kinase-associated protein 1A [Phytophthora infestans T30-4]
gi|262102964|gb|EEY61016.1| S-phase kinase-associated protein 1A [Phytophthora infestans T30-4]
Length = 179
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 7 GEVFEHMIEDDC---AVDRIPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDD 60
E+ + +I DD V IPLPNV + K I++C+ H M + L + + D
Sbjct: 41 SELVKTLISDDADDDEVQEIPLPNVKSPVLSKVIEFCSHHHNNPMREIEKPLKSADMHDV 100
Query: 61 LKAWDADLVKVD 72
+ WDA+ V ++
Sbjct: 101 VSDWDANFVDIE 112
>gi|85792311|gb|ABC84197.1| SLF-interacting SKP1-like protein 1, partial [Antirrhinum
hispanicum]
gi|85792318|gb|ABC84198.1| SLF-interacting SKP1-like protein 1 [Antirrhinum hispanicum]
gi|85792335|gb|ABC84199.1| SLF-interacting SKP1-like protein 1 [Antirrhinum hispanicum]
Length = 161
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDAD 67
E+ ++M+EDDC IP+P V K K I + +KH ++++ DD+K +D +
Sbjct: 31 EMIKNMVEDDCVTTAIPIPVVDSKTLAKVIVFLDKHGDSTIS--------SDDMKKFDEE 82
Query: 68 LV 69
V
Sbjct: 83 YV 84
>gi|388858282|emb|CCF48150.1| probable negative regulator sulfur controller-3 [Ustilago hordei]
Length = 158
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKH--DEASMFDDL-ATTSIDDDLKAW 64
+ + M+ED D+ IPLPNV+ + K ++YC+ H D + DD + D+ W
Sbjct: 24 LIKQMLEDIGDTDQPIPLPNVSSNVLKKVLEYCSHHRSDPPAPADDAEESRRRTTDISDW 83
Query: 65 DADLVKVD 72
DA ++VD
Sbjct: 84 DAKFIQVD 91
>gi|345485794|ref|XP_001601783.2| PREDICTED: S-phase kinase-associated protein 1-like [Nasonia
vitripennis]
Length = 105
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 19/89 (21%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVFE + +D +D +PLPNV I K I++ H
Sbjct: 6 LQSSDGEVFEVDVDIAKCSVTIKTMLEDLGMDEDEEEVVPLPNVNSAILRKVIQWATYHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKV 71
+ + DD+ +WDAD +KV
Sbjct: 66 DDPPPPEDDENKEKRTDDISSWDADFLKV 94
>gi|22094874|gb|AAM92014.1| Skp1-like protein [unidentified]
Length = 178
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 15 EDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLVKV 71
++D V IPLPNV + K I++C+ H M + L ++ + D + WDA+ V +
Sbjct: 51 QEDDEVQEIPLPNVKSTVLSKVIEFCSHHHNNPMREIEKPLKSSDMHDVVSDWDANFVDI 110
Query: 72 D 72
+
Sbjct: 111 E 111
>gi|405977799|gb|EKC42233.1| S-phase kinase-associated protein 1 [Crassostrea gigas]
Length = 162
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVD----RIPLPNVTIKIFYKAIKYCNKHD 44
L+S +GEVFE M+ED D +PLPNV I K I +C H
Sbjct: 6 LQSLEGEVFEIDVEIARQSVTIKTMLEDLGVEDDDEEPVPLPNVNAAILRKVIAWCTYHK 65
Query: 45 EASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ +WDA+ +KVD
Sbjct: 66 DDPPPPEDDENKEKRTDDICSWDAEFLKVD 95
>gi|403266228|ref|XP_003925295.1| PREDICTED: S-phase kinase-associated protein 1-like [Saimiri
boliviensis boliviensis]
Length = 163
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSD E+FE +E D+ D +PLPNV I K I++C H
Sbjct: 6 LQSSDREIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD +++KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEVLKVD 96
>gi|1583224|prf||2120310B RNA polymerase II elongation factor
Length = 163
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE M+ED D +PLPNV + K I++C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDDGDDDPVPLPNVNAAVLKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|326520419|dbj|BAK07468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 25/90 (27%)
Query: 8 EVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHD-----EASMFDDL---------- 52
++ H++ED CA RIP N+ I ++YC KH EAS D
Sbjct: 88 QMLRHVMEDGCADGRIPTANIHSDILEMVVEYCEKHGPYYDPEASERDRYPFPPFPVELT 147
Query: 53 -------ATTSIDDD---LKAWDADLVKVD 72
T +D D LK WD+D + +D
Sbjct: 148 PTVSSIKPVTYVDPDPHGLKDWDSDFISLD 177
>gi|357470455|ref|XP_003605512.1| SKP1-like protein [Medicago truncatula]
gi|355506567|gb|AES87709.1| SKP1-like protein [Medicago truncatula]
Length = 157
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
+ + +H I+D IP+PNVT KI K I+YC KH
Sbjct: 70 ESQTIKHSIDDVSDDTGIPIPNVTGKILAKVIEYCKKH 107
>gi|67083917|gb|AAY66893.1| SCF ubiquitin ligase complex [Ixodes scapularis]
gi|427786713|gb|JAA58808.1| Putative s-phase kinase-associated protein 1 [Rhipicephalus
pulchellus]
gi|442751375|gb|JAA67847.1| Putative scf ubiquitin ligase skp1 component [Ixodes ricinus]
Length = 162
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVF + M+ED D + +PLPNV I K I + H
Sbjct: 6 LQSSDGEVFDVDVEIAKASVTIKTMLEDLGMDDDEDEVVPLPNVNSAILKKVIHWATYHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 66 DDPPPPEDDENKEKRTDDISSWDADFLKVD 95
>gi|403255882|ref|XP_003920635.1| PREDICTED: S-phase kinase-associated protein 1 [Saimiri
boliviensis boliviensis]
Length = 163
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+FE +E D+ D +PLPNV I K +C H
Sbjct: 6 LQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVSSWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 96
>gi|371781492|emb|CCA95104.1| putative S phase kinase-associated protein 1, partial [Lonicera
maackii]
Length = 61
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 26 PNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
P KI K I+YC KH E +D A +++LK++DAD VKVD
Sbjct: 5 PTSPDKILAKVIEYCKKHVETPKSEDKAN---EEELKSFDADFVKVD 48
>gi|426263314|emb|CCG34077.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 138
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDE--ASMFDDLATTSIDDDLKAWDADLVKVD 72
IPL NVT KI K ++YC H E DD DD+ WD D VD
Sbjct: 20 IPLHNVTQKILNKVVEYCKHHCEHPTPKSDDKNNDKKSDDILPWDKDFCNVD 71
>gi|428672144|gb|EKX73059.1| conserved hypothetical protein [Babesia equi]
Length = 178
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+ IPLPN+ ++ K I+YC H + + L + +++ + WD + V VD
Sbjct: 66 EPIPLPNIKTRVLNKIIEYCKYHYNNPPSQIPQPLKSAQLNEVVSQWDYEFVNVD 120
>gi|339255832|ref|XP_003370659.1| tetramerization domain protein, skp1 family [Trichinella
spiralis]
gi|316965797|gb|EFV50470.1| tetramerization domain protein, skp1 family [Trichinella
spiralis]
Length = 159
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 20 VDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
++ IPLP + K+ K ++YCN H +D+ + D + WDA+ VD
Sbjct: 44 LESIPLPKINSKVLGKILQYCNHHRNDPPYDE-TKPFLPDFITNWDAEFFNVD 95
>gi|332374068|gb|AEE62175.1| unknown [Dendroctonus ponderosae]
Length = 162
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE F + M+ED D + +PLPNV I K +++ H
Sbjct: 6 LQSSDGETFDVDVEIAKCSVTIKTMLEDLGMDDEEEEVVPLPNVNSAILRKVLQWATFHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 66 DDPPPPEDDENKEKRTDDISSWDADFLKVD 95
>gi|194885240|ref|XP_001976406.1| GG20030 [Drosophila erecta]
gi|190659593|gb|EDV56806.1| GG20030 [Drosophila erecta]
Length = 170
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKH- 43
L+SSDG++F+ IE +DC ++ IPLPNV I K + + N H
Sbjct: 6 LQSSDGKIFDTDIETAKCSSTIKTLLEDCPLEAENDTLIPLPNVNSAILKKVLAWANHHR 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D+A + A + AWDA+ + +D
Sbjct: 66 EDDAEENEWEAVARPMMQISAWDAEFLAMD 95
>gi|145529586|ref|XP_001450576.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418198|emb|CAK83179.1| unnamed protein product [Paramecium tetraurelia]
Length = 162
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS---MFDDLATTSIDDDLKAWDADLV 69
+I+D + + IPLPNV I K I+YCN H S + L + ++ D ++ DAD +
Sbjct: 31 IIDDTGSEEEIPLPNVKSSILNKVIEYCNMHRNDSPPEIEKPLRSNNLADCVEQKDADFI 90
Query: 70 KV 71
+
Sbjct: 91 NI 92
>gi|384498891|gb|EIE89382.1| E3 ubiquitin ligase complex SCF subunit sconC [Rhizopus delemar
RA 99-880]
Length = 155
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 1 MLKSSDGEVFE-------------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKH-DE 45
+L SSD E F+ +M+ED +D IPLPNVT KI K I++C H D+
Sbjct: 4 VLSSSDQEEFKVDKEVAQRSVLIKNMLEDVEDLDAPIPLPNVTAKILGKVIEWCTHHRDD 63
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
DD + D D WD ++VD
Sbjct: 64 PITQDDQERRNTDID--EWDQKYMEVD 88
>gi|302812603|ref|XP_002987988.1| hypothetical protein SELMODRAFT_127189 [Selaginella
moellendorffii]
gi|300144094|gb|EFJ10780.1| hypothetical protein SELMODRAFT_127189 [Selaginella
moellendorffii]
Length = 137
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKS++G+VFE +MIED I LPNV+ I K I+Y H +A
Sbjct: 6 LKSAEGDVFEVDEELALESLMVKNMIEDVGLDSAISLPNVSSTILAKVIEYIKFHMDAQK 65
Query: 49 FDDLATTSIDDDLKAWDADLVKV 71
D TS +++KA+D D V V
Sbjct: 66 -DGSKKTS--EEIKAFDDDFVNV 85
>gi|240975904|ref|XP_002402202.1| SCF ubiquitin ligase complex, putative [Ixodes scapularis]
gi|215491121|gb|EEC00762.1| SCF ubiquitin ligase complex, putative [Ixodes scapularis]
Length = 155
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVD-----RIPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVF+ +E +D +D +PLPNV I K I + H
Sbjct: 55 LQSSDGEVFDVDVEIAKASVTIKTMLEDLGMDDDEDEVVPLPNVNSAILKKVIHWATYHK 114
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ +WDAD +KVD
Sbjct: 115 DDPPPPEDDENKEKRTDDISSWDADFLKVD 144
>gi|16024893|gb|AAL11454.1| Skp1 [Physarum polycephalum]
Length = 165
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVF-------------EHMIED--DCAVDRIPLPNVTIKIFYKAIKY-CNKHDE 45
L+SSD +VF ++M+ED D A IPLPNVT I K I Y + H+
Sbjct: 12 LESSDNKVFTVPTVVAQQSVTIKNMLEDIGDGADAPIPLPNVTGYILEKVIDYLVHHHEH 71
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
D D++ WD D VD
Sbjct: 72 PEPTPDEKAEKRTDNISGWDKDFCNVD 98
>gi|302782339|ref|XP_002972943.1| hypothetical protein SELMODRAFT_98727 [Selaginella
moellendorffii]
gi|300159544|gb|EFJ26164.1| hypothetical protein SELMODRAFT_98727 [Selaginella
moellendorffii]
Length = 137
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASM 48
LKS++G+VFE +MIED I LPNV+ I K I+Y H +A
Sbjct: 6 LKSAEGDVFEVDEELALESLMVKNMIEDVGLDSAISLPNVSSPILAKVIEYIKFHMDAQK 65
Query: 49 FDDLATTSIDDDLKAWDADLVKV 71
D TS +++KA+D D V V
Sbjct: 66 -DGSKKTS--EEIKAFDDDFVNV 85
>gi|351705319|gb|EHB08238.1| S-phase kinase-associated protein 1 [Heterocephalus glaber]
Length = 108
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVD------RIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+ E +E +D +D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEISEVDVEITTQSVTIKTMLEDLGIDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVKVD 72
+ + DD+ W+ + +KVD
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWNQEFLKVD 96
>gi|195123615|ref|XP_002006299.1| GI20969 [Drosophila mojavensis]
gi|193911367|gb|EDW10234.1| GI20969 [Drosophila mojavensis]
Length = 162
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE----------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH-- 43
L+SSD E+F+ IE D+ +PLPNV I K + + H
Sbjct: 6 LESSDKEIFDTDIEIAKCSETIKTALEDLGDESDNSVLPLPNVNSAILRKVLHWATYHAQ 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D +D DD+ +WDAD +KVD
Sbjct: 66 DDPQQAQEDENKEKRTDDISSWDADFLKVD 95
>gi|406864862|gb|EKD17905.1| SCF complex subunit Skp1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 165
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 16/75 (21%)
Query: 9 VFEHMIED--DCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------ 59
+ ++MIED D A+D +P+PNV + K I++C H D A TS DD
Sbjct: 29 LIKNMIEDLGDAALDTDVPIPNVNEAVLKKVIEWCEHHK-----GDAAATSDDDSDSRKK 83
Query: 60 --DLKAWDADLVKVD 72
D++ WD ++VD
Sbjct: 84 TTDIEEWDQKFMQVD 98
>gi|397579818|gb|EJK51345.1| hypothetical protein THAOC_29487 [Thalassiosira oceanica]
Length = 143
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLVKVD 72
IPLPNV + K I++C H M + L + + + ++ W AD V V+
Sbjct: 44 IPLPNVKAAVLRKVIEFCQHHKGEPMTEIEKPLKSARMGEVVQKWYADFVNVE 96
>gi|384485660|gb|EIE77840.1| E3 ubiquitin ligase complex SCF subunit sconC [Rhizopus delemar
RA 99-880]
Length = 155
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH-DEASMFDDLATTSIDDDLKAWDADLVKVD 72
IPLPNVT KI K I++C H D+ DD + D D WD ++VD
Sbjct: 40 IPLPNVTAKILGKVIEWCTHHRDDPITPDDQERRNTDID--EWDQKFMEVD 88
>gi|17563270|ref|NP_507393.1| Protein SKR-5 [Caenorhabditis elegans]
gi|3877338|emb|CAB07209.1| Protein SKR-5 [Caenorhabditis elegans]
Length = 145
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDE-ASMFDDLATTSIDDDLKAWDADLVKVD 72
IPL NVT +IF K I++C H E D DD+ WD + +KVD
Sbjct: 43 IPLKNVTSEIFKKVIEWCEYHAEDIPKPPDNVEEKRTDDIGEWDVEFLKVD 93
>gi|17027132|gb|AAL34096.1| SKR-5 [Caenorhabditis elegans]
Length = 144
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDE-ASMFDDLATTSIDDDLKAWDADLVKVD 72
IPL NVT +IF K I++C H E D DD+ WD + +KVD
Sbjct: 42 IPLKNVTSEIFKKVIEWCEYHAEDIPKPPDNVEEKRTDDIGEWDVEFLKVD 92
>gi|268535146|ref|XP_002632706.1| Hypothetical protein CBG18731 [Caenorhabditis briggsae]
Length = 162
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
IP+ NV+ +I K I C H D A D DD+ +WDA+ +KVD
Sbjct: 30 IPVQNVSTRILKKVISRCQYHYQDTAPADDQGNREKRTDDIASWDAEFLKVD 81
>gi|195381643|ref|XP_002049557.1| GJ20688 [Drosophila virilis]
gi|194144354|gb|EDW60750.1| GJ20688 [Drosophila virilis]
Length = 162
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE----------------DDCAVDRIPLPNVTIKIFYKAIKYCNKH-- 43
L+SSD E+F+ IE D+ +PLPNV I K + + H
Sbjct: 6 LESSDKEIFDTDIEIAKCSETIKTALEDLGDESDNSVLPLPNVNSTILRKVLHWATYHAQ 65
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D +D DD+ +WDAD +KVD
Sbjct: 66 DDPQQPQEDENKEKRTDDISSWDADFLKVD 95
>gi|308474186|ref|XP_003099315.1| hypothetical protein CRE_09709 [Caenorhabditis remanei]
gi|308267454|gb|EFP11407.1| hypothetical protein CRE_09709 [Caenorhabditis remanei]
Length = 171
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 15 EDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEASMFDDL-ATTSIDDDLKAWDADLVKVD 72
ED D IP+ NVT I K I +C H +A+ DD DD+ +WD + +KVD
Sbjct: 46 EDAVNTDPIPVQNVTAPILKKVIAWCTYHYQDATPTDDADNREKRTDDIASWDVEFLKVD 105
>gi|213972539|ref|NP_001135430.1| S phase kinase associated protein 1 [Nasonia vitripennis]
Length = 163
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKH-DEASMFDDLATTSIDDDLKAWDADLVKV 71
M E+D + IPLPNV I K +++ H D+ + +D T DD+ WD + +KV
Sbjct: 36 MPEEDDDEEPIPLPNVNATILKKVLEWATFHKDDPPVNEDENTEKRTDDICEWDMEFLKV 95
Query: 72 D 72
D
Sbjct: 96 D 96
>gi|407922706|gb|EKG15802.1| SKP1 component [Macrophomina phaseolina MS6]
Length = 163
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDE---ASMFDDLATTSIDDDLKAWDADLVKVD 72
IP+PNV ++ K I++C +H + AS DD + D+ WD ++VD
Sbjct: 44 IPIPNVNEQVMRKVIEWCEQHKKDPPASADDDSDSRKKSTDIDEWDQKFMQVD 96
>gi|392566963|gb|EIW60138.1| S-phase kinase-associated protein 1A-like protein [Trametes
versicolor FP-101664 SS1]
Length = 161
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + A S D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPAADAEQSQDETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|443926341|gb|ELU45033.1| S-phase kinase-associated protein 1A-like protein [Rhizoctonia
solani AG-1 IA]
Length = 241
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 6 DGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------ 59
D +V EH+ E D IPLPNV+ + K ++YC H + + DD
Sbjct: 15 DKDVAEHVGESD---QPIPLPNVSSSVLKKVLEYCEHHRAEPLPTAETDNNADDPRKRQV 71
Query: 60 -DLKAWDADLVKVD 72
++ WD ++VD
Sbjct: 72 SEIGEWDQKFIQVD 85
>gi|195586044|ref|XP_002082788.1| GD25046 [Drosophila simulans]
gi|194194797|gb|EDX08373.1| GD25046 [Drosophila simulans]
Length = 170
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE+FE IE +DC V+ IPLPNV I K + + H
Sbjct: 6 LQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAESDTLIPLPNVNSTILKKILIWAKHHR 65
Query: 45 EASMFDDLATT--SIDDDLKAWDADLVKVD 72
E ++ S+ + WDA+ + +D
Sbjct: 66 EDDAEENEEEADKSVAMQITPWDAEFLTMD 95
>gi|409082107|gb|EKM82465.1| hypothetical protein AGABI1DRAFT_111082 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199932|gb|EKV49856.1| hypothetical protein AGABI2DRAFT_190295 [Agaricus bisporus var.
bisporus H97]
Length = 161
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + + ++ D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPSAESESNQDETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|85000397|ref|XP_954917.1| sulfur metabolism negative regulator [Theileria annulata strain
Ankara]
gi|65303063|emb|CAI75441.1| sulfur metabolism negative regulator, putative [Theileria
annulata]
Length = 172
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+ IPLPN+ + K I+YC H + + L + +++ + WD + V VD
Sbjct: 43 EPIPLPNIKTNVLNKIIEYCKHHYNNPPSQIPQPLKSAQLNEVVSEWDYEFVNVD 97
>gi|195347086|ref|XP_002040085.1| GM15542 [Drosophila sechellia]
gi|194135434|gb|EDW56950.1| GM15542 [Drosophila sechellia]
Length = 170
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE+FE IE +DC V+ IPLPNV I K + + H
Sbjct: 6 LQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAESDTLIPLPNVNSTILKKILIWAKHHR 65
Query: 45 EASMFDDLATT--SIDDDLKAWDADLVKVD 72
E ++ S+ + WDA+ + +D
Sbjct: 66 EDDAEENEEEADKSVAVQITPWDAEFLTMD 95
>gi|403223226|dbj|BAM41357.1| sulfur metabolism negative regulator [Theileria orientalis strain
Shintoku]
Length = 164
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+ IPLPN+ + K I+YC H + L ++ +++ + WD + V VD
Sbjct: 43 EPIPLPNIKTNVLNKIIEYCKHHYNNPPTQIPQPLKSSQLNEVVSEWDYEFVNVD 97
>gi|224012108|ref|XP_002294707.1| hypothetical protein THAPSDRAFT_38460 [Thalassiosira pseudonana
CCMP1335]
gi|220969727|gb|EED88067.1| hypothetical protein THAPSDRAFT_38460 [Thalassiosira pseudonana
CCMP1335]
Length = 156
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLVKVD 72
IPLPNV + K I++C H M + L + ++ + ++ W AD V V+
Sbjct: 37 IPLPNVKSTVLKKVIEFCKHHRSEPMTEIEKPLKSAAMAEVVQKWYADFVNVE 89
>gi|71027199|ref|XP_763243.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350196|gb|EAN30960.1| Skp1 protein, putative [Theileria parva]
Length = 182
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+ IPLPN+ + K I+YC H + + L + +++ + WD + V VD
Sbjct: 43 EPIPLPNIKTNVLNKIIEYCKHHYNNPPSQIPQPLKSAQLNEVVSEWDYEFVNVD 97
>gi|299752934|ref|XP_001832949.2| SCF ubiquitin ligase [Coprinopsis cinerea okayama7#130]
gi|298410067|gb|EAU88638.2| SCF ubiquitin ligase [Coprinopsis cinerea okayama7#130]
Length = 161
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 1 MLKSSDGEVF-------------EHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEA 46
+L +SD E F ++M+ED D+ IPLPNV+ + K ++YC H
Sbjct: 3 LLTTSDNEQFNADREVVERSVLIKNMLEDVGESDQAIPLPNVSSAVLKKVLEYCEHHRGE 62
Query: 47 SMFDDLATTSIDD------DLKAWDADLVKVD 72
+ A + D+ D+ WD + VD
Sbjct: 63 PLPSADAEQNQDETRKRTTDISEWDQKFISVD 94
>gi|125604968|gb|EAZ44004.1| hypothetical protein OsJ_28627 [Oryza sativa Japonica Group]
Length = 177
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 15/57 (26%)
Query: 2 LKSSDGEVFE--------------HMIEDDC-AVDRIPLPNVTIKIFYKAIKYCNKH 43
L SSDG FE M +DD A++ IPLPNV + K ++YC KH
Sbjct: 20 LISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKH 76
>gi|115473461|ref|NP_001060329.1| Os07g0625400 [Oryza sativa Japonica Group]
gi|22093768|dbj|BAC07059.1| putative kinetochore protein [Oryza sativa Japonica Group]
gi|113611865|dbj|BAF22243.1| Os07g0625400 [Oryza sativa Japonica Group]
gi|125601145|gb|EAZ40721.1| hypothetical protein OsJ_25190 [Oryza sativa Japonica Group]
Length = 182
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 13 MIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLV 69
MI++ CA IPLP V IK K +Y NKH A T+ ++LK WD +
Sbjct: 59 MIDNVCADHGIPLPKVDIKTVRKMAEYMNKH--------FAITN-KEELKIWDEGFI 106
>gi|412988240|emb|CCO17576.1| predicted protein [Bathycoccus prasinos]
Length = 176
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
IPLPNV I K I YC H A D +DD K +D + VKVD
Sbjct: 63 IPLPNVAKSILQKVITYCEYHANAKGED--GKDKSEDDKKNFDLEYVKVD 110
>gi|222637489|gb|EEE67621.1| hypothetical protein OsJ_25187 [Oryza sativa Japonica Group]
Length = 617
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 17/81 (20%)
Query: 2 LKSSDGEVFE---------HMIEDDCAVDR----IPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE E +I D R IPLP+V K K I+YC++H
Sbjct: 4 LKSSDGEPVEVTEASARISKVIGDKIDAGRGGEAIPLPHVDKKTLKKVIEYCDEHAN--- 60
Query: 49 FDDLATTSIDDDLKAWDADLV 69
++ T ++LK WD +
Sbjct: 61 -ENSDTDEQKEELKNWDKAFI 80
>gi|125563007|gb|EAZ08387.1| hypothetical protein OsI_30647 [Oryza sativa Indica Group]
Length = 177
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 15/57 (26%)
Query: 2 LKSSDGEVFE--------------HMIEDDC-AVDRIPLPNVTIKIFYKAIKYCNKH 43
L SSDG FE M +DD A++ IPLPNV + K ++YC KH
Sbjct: 20 LISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKH 76
>gi|195455272|ref|XP_002074643.1| GK23055 [Drosophila willistoni]
gi|194170728|gb|EDW85629.1| GK23055 [Drosophila willistoni]
Length = 154
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 24/91 (26%)
Query: 2 LKSSDGEVFE------------HMIEDDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGE+FE + DC ++ IPLPNV I K + + N H
Sbjct: 6 LQSSDGEIFETDDRAAKCSGTIKTLLKDCQLEDAESQIIPLPNVNSMILTKILLWVNHHK 65
Query: 45 EASMFDDL---ATTSIDDDLKAWDADLVKVD 72
+ DD T SI WDA+ ++VD
Sbjct: 66 DDEPVDDNEEDRTYSI----SQWDAEFLQVD 92
>gi|219109658|ref|XP_002176583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411118|gb|EEC51046.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 169
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 22 RIPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLVKVD 72
IPLPNV ++ K I++C H + M + L + + D ++ W AD V V+
Sbjct: 49 EIPLPNVKSQVLNKVIEFCEHHLQEPMTEIEKPLKSQVMADVVQKWYADFVDVE 102
>gi|355691604|gb|EHH26789.1| hypothetical protein EGK_16856, partial [Macaca mulatta]
Length = 155
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYCNKH 43
L+SSDGE+F+ M+ED + D +PLPNV I K I++C H
Sbjct: 6 LQSSDGEIFKVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65
Query: 44 DEASMFDDLATT--SIDDDLKAWDADLVK 70
+ + DD+ WD + +K
Sbjct: 66 KDDPPPPEDDENKEKRTDDIPVWDQEFLK 94
>gi|414888311|tpg|DAA64325.1| TPA: SKP1-like protein 1A [Zea mays]
Length = 171
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 17 DCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDD-------LATTSIDDDLKAWDADLV 69
DC IP+ NV I K I YC KH A D + + DDLK++DA+ V
Sbjct: 43 DCDDSDIPVFNVNANILDKVIAYCRKHASAPRADGGDAEPSAASNKASADDLKSFDAEFV 102
Query: 70 KVD 72
VD
Sbjct: 103 DVD 105
>gi|17542032|ref|NP_503044.1| Protein SKR-8 [Caenorhabditis elegans]
gi|17027136|gb|AAL34098.1|AF440510_1 SKR-8 [Caenorhabditis elegans]
gi|126468450|emb|CAM36327.1| Protein SKR-8 [Caenorhabditis elegans]
Length = 194
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Query: 2 LKSSDGEVFE-------------HMI-----EDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
++S+DG+VFE ++I ED ++D IP+ NVT I I++C KH
Sbjct: 25 VESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKH 84
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
++ + + + ++ WD + +K+D
Sbjct: 85 KGEALPVEDDSVPKNINVPEWDTNFLKID 113
>gi|115478294|ref|NP_001062742.1| Os09g0272900 [Oryza sativa Japonica Group]
gi|113630975|dbj|BAF24656.1| Os09g0272900 [Oryza sativa Japonica Group]
Length = 198
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 15/57 (26%)
Query: 2 LKSSDGEVFE--------------HMIEDDC-AVDRIPLPNVTIKIFYKAIKYCNKH 43
L SSDG FE M +DD A++ IPLPNV + K ++YC KH
Sbjct: 41 LISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKH 97
>gi|195628518|gb|ACG36089.1| SKP1-like protein 1A [Zea mays]
Length = 171
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 17 DCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDD-------LATTSIDDDLKAWDADLV 69
DC IP+ NV I K I YC KH A D + + DDLK++DA+ V
Sbjct: 43 DCDDSDIPVFNVNANILDKVIAYCRKHAXAPRADGGDAEPSAASNKASADDLKSFDAEFV 102
Query: 70 KVD 72
VD
Sbjct: 103 DVD 105
>gi|440796096|gb|ELR17205.1| Sphase kinase-associated protein, putative [Acanthamoeba
castellanii str. Neff]
Length = 159
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 2 LKSSDGEVFE-------------HMIED-DCAVD-RIPLPNVTIKIFYKAIKYCNKH--D 44
L+SSD +VFE HM++D D D IPLPNVT KI K I++ H +
Sbjct: 5 LESSDEQVFEVPREIAEMSVTVKHMLDDVDADSDAPIPLPNVTGKILAKVIEWAKYHHAN 64
Query: 45 EASMFDDLATTSIDDDLKAWDADLVKVD 72
+ D+ DD+ WD + +VD
Sbjct: 65 PDAPSDEKKDEKRTDDIIPWDKEFCEVD 92
>gi|1017813|gb|AAA79202.1| OCP2, partial [Homo sapiens]
Length = 150
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATT--SIDDDLKAWDADLVKVD 72
D +PLPNV I K I++C H + + DD+ WD + +KVD
Sbjct: 30 DPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVD 83
>gi|403377536|gb|EJY88765.1| Skp1 family protein [Oxytricha trifallax]
Length = 160
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 16/87 (18%)
Query: 2 LKSSDGEVFE-------------HMIEDDCAVDRIPLPNVTIKIFYKAIKYCNK---HDE 45
L +S+GE+ E MI+D + IPLPNV I K I +C +
Sbjct: 6 LVTSEGEIVEVDVDVASKSVLIKGMIDDSGVEEEIPLPNVKRTILQKIIDFCTYIKDNSP 65
Query: 46 ASMFDDLATTSIDDDLKAWDADLVKVD 72
+ L + +++D W AD V +D
Sbjct: 66 PEIEKPLRSNNLNDVTTPWYADFVNLD 92
>gi|324515268|gb|ADY46147.1| S-phase kinase-associated protein 1 [Ascaris suum]
Length = 173
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 25/97 (25%)
Query: 1 MLKSSDGEVFE-------------HMIED---------DCAV-DRIPLPNVTIKIFYKAI 37
L+SSD EVFE M++D D + D IPL NV I K I
Sbjct: 11 QLQSSDNEVFEVERDVIKLSTTINTMLQDLGMDNNDSGDVEMSDPIPLQNVNAAILKKVI 70
Query: 38 KYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
++C H D D DD+ +WD + +KVD
Sbjct: 71 QWCQYHKDDPTPPEDSDNKEKRTDDIPSWDVEFLKVD 107
>gi|170109753|ref|XP_001886083.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639013|gb|EDR03287.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 161
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + S D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPSADTEQSQDETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|169765209|ref|XP_001817076.1| E3 ubiquitin ligase complex SCF subunit sconC [Aspergillus oryzae
RIB40]
gi|238503494|ref|XP_002382980.1| sulfur metabolism regulator SkpA, putative [Aspergillus flavus
NRRL3357]
gi|317138684|ref|XP_003189072.1| E3 ubiquitin ligase complex SCF subunit sconC [Aspergillus oryzae
RIB40]
gi|74588441|sp|Q5KU00.1|SKP1_ASPOR RecName: Full=E3 ubiquitin ligase complex SCF subunit sconC;
AltName: Full=Sulfur controller C; AltName: Full=Sulfur
metabolite repression control protein C
gi|302595898|sp|B8NSJ0.1|SKP1_ASPFN RecName: Full=E3 ubiquitin ligase complex SCF subunit sconC;
AltName: Full=Sulfur controller C; AltName: Full=Sulfur
metabolite repression control protein C
gi|57157146|dbj|BAD83607.1| sulfur metabolite repression control protein [Aspergillus oryzae]
gi|57157152|dbj|BAD83610.1| sulfur metabolite repression control protein C [Aspergillus
oryzae]
gi|83764930|dbj|BAE55074.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690451|gb|EED46800.1| sulfur metabolism regulator SkpA, putative [Aspergillus flavus
NRRL3357]
gi|391863371|gb|EIT72682.1| SCF ubiquitin ligase, Skp1 component [Aspergillus oryzae 3.042]
Length = 161
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 8 EVFEHMIEDDCAV-DRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAW 64
++ ++M+ED + IP+PNV + K I++C H D S DD + D+ W
Sbjct: 27 QLIKNMLEDLGETGEPIPIPNVNEAVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEW 86
Query: 65 DADLVKVD 72
D ++VD
Sbjct: 87 DQKFMQVD 94
>gi|449547315|gb|EMD38283.1| hypothetical protein CERSUDRAFT_113451 [Ceriporiopsis
subvermispora B]
Length = 161
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + +S D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPAADTESSQDETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|323456247|gb|EGB12114.1| hypothetical protein AURANDRAFT_58667 [Aureococcus
anophagefferens]
Length = 157
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLVKVD 72
IPLPNV + K I++C ++ E M + L + ++ + ++ W A+ V VD
Sbjct: 38 IPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVDVD 90
>gi|390332555|ref|XP_799167.3| PREDICTED: S-phase kinase-associated protein 1-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE-----------------DDCAVDRIPLPNVTIKIFYKAIKYCNKHD 44
L+SSDGEVFE +E D+ D IPLPNV I K +++C+ H
Sbjct: 50 LQSSDGEVFEVDVEVARQSVIIKTMLVDLGMDEEDDDAIPLPNVNSTILKKVLQWCHYHK 109
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ A D + +KVD
Sbjct: 110 DDPPPPEDDENREKRTDDICAHDQEFLKVD 139
>gi|317138686|ref|XP_003189073.1| E3 ubiquitin ligase complex SCF subunit sconC [Aspergillus oryzae
RIB40]
Length = 160
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 8 EVFEHMIEDDCAV-DRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAW 64
++ ++M+ED + IP+PNV + K I++C H D S DD + D+ W
Sbjct: 27 QLIKNMLEDLGETGEPIPIPNVNEAVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEW 86
Query: 65 DADLVKVD 72
D ++VD
Sbjct: 87 DQKFMQVD 94
>gi|242213009|ref|XP_002472335.1| S-phase kinase-associated protein 1A-like protein [Postia
placenta Mad-698-R]
gi|220728612|gb|EED82503.1| S-phase kinase-associated protein 1A-like protein [Postia
placenta Mad-698-R]
Length = 161
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + + S ++ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPTAESEQSQEETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|390597760|gb|EIN07159.1| hypothetical protein PUNSTDRAFT_104688 [Punctularia
strigosozonata HHB-11173 SS5]
Length = 159
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + +A S D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSASVLKKVLEYCEHHRGEPL--PVADESQDETRKRTTDI 81
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 82 SEWDQKFITVD 92
>gi|313244749|emb|CBY15465.1| unnamed protein product [Oikopleura dioica]
Length = 137
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 24 PLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDLKA----WDADLVKVD 72
P+PNV+ I K I++C +H E + DD + + A WDA+ +KVD
Sbjct: 44 PIPNVSHAILKKIIEWCEQHKEDAPVDDEDPSYQEKKRTAEVPRWDAEFLKVD 96
>gi|440795659|gb|ELR16776.1| sulfur metabolism negative regulator SconC, putative
[Acanthamoeba castellanii str. Neff]
Length = 146
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVF-------------EHMIED---DCAVDRIPLPNVTIKIFYKAIKYCNKH-- 43
L+SSDG F +HM+ D + + IPLPNV K K I+YC H
Sbjct: 9 LQSSDGVDFSVPRSVASMSVTLDHMLHDISRSQSDEAIPLPNVNAKALEKVIEYCKHHEK 68
Query: 44 DEASMFDDLATTSID-DDLKAWDADLVKVD 72
DE D A ++ AWD ++V+
Sbjct: 69 DEPVPASDAAKQEHSVHNISAWDKQFMQVE 98
>gi|221116118|ref|XP_002160899.1| PREDICTED: S-phase kinase-associated protein 1-like [Hydra
magnipapillata]
gi|449692659|ref|XP_004213122.1| PREDICTED: S-phase kinase-associated protein 1-like [Hydra
magnipapillata]
Length = 162
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFE-------------HMIED----DCAVDRIPLPNVTIKIFYKAIKYCNKHD 44
L+SSD EVFE M+ED D + IPLPNV I K I + H
Sbjct: 6 LQSSDSEVFEVDVEIAKASMTIKTMLEDLGMDDDDDEPIPLPNVNAAILRKVINWATHHK 65
Query: 45 EASMFDDLATTS--IDDDLKAWDADLVKVD 72
+ + DD+ WD + +KVD
Sbjct: 66 DDPPPPEDDENREKRTDDIDPWDQEFLKVD 95
>gi|68072091|ref|XP_677959.1| Skp1 family protein [Plasmodium berghei strain ANKA]
gi|56498265|emb|CAI04810.1| Skp1 family protein, putative [Plasmodium berghei]
Length = 172
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH-----DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D IPLPN+ +I K I+Y H DE L T+++ D + WD D V D
Sbjct: 41 DTIPLPNIKTQILKKVIEYMEYHIHNPPDEIP--KPLITSNLQDVVSVWDYDFVNTD 95
>gi|403418016|emb|CCM04716.1| predicted protein [Fibroporia radiculosa]
Length = 161
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + + + D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPTAESEQNQDETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|403346584|gb|EJY72691.1| SCF ubiquitin ligase, SKP1 component [Oxytricha trifallax]
Length = 260
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 4 SSDGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEAS---MFDDLATTSIDDD 60
+S + + MI+D + IPLPNV I K I +C + S + L + +++D
Sbjct: 121 ASKSVLIKGMIDDSGVEEEIPLPNVKRTILQKIIDFCTYIKDNSPPEIEKPLRSNNLNDV 180
Query: 61 LKAWDADLVKVD 72
W AD V +D
Sbjct: 181 TTPWYADFVNLD 192
>gi|409045679|gb|EKM55159.1| hypothetical protein PHACADRAFT_255585 [Phanerochaete carnosa
HHB-10118-sp]
Length = 160
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 14/74 (18%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD-------- 59
+ ++M+ED D+ IPLPNV+ + K ++YC H D L TT +
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRS----DPLPTTDSSENDDARKRT 79
Query: 60 -DLKAWDADLVKVD 72
D+ WD + VD
Sbjct: 80 TDISEWDQKFITVD 93
>gi|298712647|emb|CBJ48672.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 183
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 15 EDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFD---DLATTSIDDDLKAWDADLVKV 71
E+D IPLPNV + K I++C + E M + L + ++ D ++ W A V+V
Sbjct: 56 EEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEV 115
>gi|336367155|gb|EGN95500.1| hypothetical protein SERLA73DRAFT_142232 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379874|gb|EGO21028.1| hypothetical protein SERLADRAFT_398215 [Serpula lacrymans var.
lacrymans S7.9]
Length = 161
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + A + D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPSADADQNQDETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|194757826|ref|XP_001961163.1| GF11136 [Drosophila ananassae]
gi|190622461|gb|EDV37985.1| GF11136 [Drosophila ananassae]
Length = 161
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
+PLPNV I K I + H D +D DD+ +WDAD +KVD
Sbjct: 43 LPLPNVNSVILKKVIHWATYHKDDPQVTEEDENKEKRTDDISSWDADFLKVD 94
>gi|70927549|ref|XP_736145.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56510432|emb|CAH87723.1| hypothetical protein PC302606.00.0 [Plasmodium chabaudi chabaudi]
Length = 116
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH-----DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D IPLPN+ +I K I+Y H DE L T+++ D + WD D V D
Sbjct: 41 DTIPLPNIKTQILKKIIEYMEYHIHNPPDEIP--KPLITSNLQDVVSVWDYDFVNTD 95
>gi|195485533|ref|XP_002091129.1| GE13476 [Drosophila yakuba]
gi|194177230|gb|EDW90841.1| GE13476 [Drosophila yakuba]
Length = 162
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMF--DDLATTSIDDDLKAWDADLVKVD 72
+PLPNV I K + + H + M +D DD+ +WDAD +KVD
Sbjct: 43 LPLPNVNSLILKKVLHWATYHKDDPMVTEEDENKEKRTDDISSWDADFLKVD 94
>gi|194883802|ref|XP_001975986.1| GG22608 [Drosophila erecta]
gi|190659173|gb|EDV56386.1| GG22608 [Drosophila erecta]
Length = 162
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKHDEASMF--DDLATTSIDDDLKAWDADLVKVD 72
+PLPNV I K + + H + M +D DD+ +WDAD +KVD
Sbjct: 43 LPLPNVNSLILKKVLHWATYHKDDPMVAEEDENKEKRTDDISSWDADFLKVD 94
>gi|17563266|ref|NP_507059.1| Protein SKR-3 [Caenorhabditis elegans]
gi|17027130|gb|AAL34095.1|AF440507_1 SKR-3 [Caenorhabditis elegans]
gi|3877134|emb|CAB05516.1| Protein SKR-3 [Caenorhabditis elegans]
Length = 167
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D IPL VT I K I +C H DE D+ T D+ WDA+ +KVD
Sbjct: 51 DTIPLQKVTSTILEKIITWCEHHADDEPKKVDENKKTV---DISEWDAEFMKVD 101
>gi|395333714|gb|EJF66091.1| S-phase kinase-associated protein 1A-like protein [Dichomitus
squalens LYAD-421 SS1]
Length = 161
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + A + D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPAADAEQNQDETRKRTTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|393236615|gb|EJD44163.1| E3 ubiquitin ligase SCF complex, Skp subunit [Auricularia
delicata TFB-10046 SS5]
Length = 161
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDD------DL 61
+ ++M+ED D+ IPLPNV+ + K ++YC H + A ++ D+ D+
Sbjct: 24 LIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPAADADSNQDETRKRSTDI 83
Query: 62 KAWDADLVKVD 72
WD + VD
Sbjct: 84 SEWDQKFITVD 94
>gi|350634056|gb|EHA22420.1| hypothetical protein ASPNIDRAFT_214072 [Aspergillus niger ATCC
1015]
Length = 168
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 9 VFEHMIED-DCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWD 65
+ ++M+ED A + IP+PNV + K I++C H D S ++ + D+ WD
Sbjct: 35 LIKNMLEDLGGANEEIPIPNVNEAVLKKVIEWCRHHKNDPPSTGEEDDSRRKTTDIDEWD 94
Query: 66 ADLVKVD 72
+VD
Sbjct: 95 QKFTQVD 101
>gi|241872560|gb|ACS69065.1| pollen specific SKP1-like protein LSK1 [Lilium longiflorum]
Length = 161
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 2 LKSSDGEVFEHMIEDDCAVDRIPLPNVTIKIFYKAIKYCNKHDEASMFDDLATTSIDDDL 61
L S+ + M+++ IPLPNV+ K K I+Y H + D + +
Sbjct: 24 LASAGSGTLKTMVDEGIVEGGIPLPNVSTKSLGKIIEYWRHHAQE---DSDGSPESKAAM 80
Query: 62 KAWDADLVKVD 72
K WD + +K+D
Sbjct: 81 KEWDDEFLKLD 91
>gi|70998608|ref|XP_754026.1| sulfur metabolism regulator SkpA [Aspergillus fumigatus Af293]
gi|119498545|ref|XP_001266030.1| sulfur metabolism regulator SkpA, putative [Neosartorya fischeri
NRRL 181]
gi|74672932|sp|Q4WTT8.1|SKP1_ASPFU RecName: Full=E3 ubiquitin ligase complex SCF subunit sconC;
AltName: Full=Sulfur controller C; AltName: Full=Sulfur
metabolite repression control protein C
gi|302595847|sp|B0Y3B5.1|SKP1_ASPFC RecName: Full=E3 ubiquitin ligase complex SCF subunit sconC;
AltName: Full=Sulfur controller C; AltName: Full=Sulfur
metabolite repression control protein C
gi|302595849|sp|A1CZG3.1|SKP1_NEOFI RecName: Full=E3 ubiquitin ligase complex SCF subunit sconC;
AltName: Full=Sulfur controller C; AltName: Full=Sulfur
metabolite repression control protein C
gi|66851662|gb|EAL91988.1| sulfur metabolism regulator SkpA, putative [Aspergillus fumigatus
Af293]
gi|119414194|gb|EAW24133.1| sulfur metabolism regulator SkpA, putative [Neosartorya fischeri
NRRL 181]
gi|159126240|gb|EDP51356.1| sulfur metabolism regulator SkpA, putative [Aspergillus fumigatus
A1163]
Length = 158
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 9 VFEHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWD 65
+ ++M+ED D IP+PNV + K I++C H D S DD + D+ WD
Sbjct: 26 LIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEWD 85
Query: 66 ADLVKVD 72
++VD
Sbjct: 86 QKFMQVD 92
>gi|340369204|ref|XP_003383138.1| PREDICTED: s-phase kinase-associated protein 1-like [Amphimedon
queenslandica]
Length = 163
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 23/92 (25%)
Query: 2 LKSSDGEVFEHMIEDDCA-------------------VDRIPLPNVTIKIFYKAIKYCNK 42
L+SSDGE+FE +E D A + +PLPNV I K I++
Sbjct: 6 LQSSDGEIFE--VEVDIAKASNTIKTMIEDLGLDEDDDEPVPLPNVNGPIMKKVIEWATH 63
Query: 43 HDEASMFDDLATT--SIDDDLKAWDADLVKVD 72
H + + DD++ WD + +KVD
Sbjct: 64 HKDDPPPPEDEENREKRTDDIEPWDQEFLKVD 95
>gi|218200052|gb|EEC82479.1| hypothetical protein OsI_26929 [Oryza sativa Indica Group]
Length = 538
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 17/81 (20%)
Query: 2 LKSSDGEVFE---------HMIEDDCAVDR----IPLPNVTIKIFYKAIKYCNKHDEASM 48
LKSSDGE E +I D R IPLP+V K K I+YC++H
Sbjct: 4 LKSSDGEPVEVTEASARISKVIGDKIDAGRGGEAIPLPHVDNKTLKKVIEYCDEHAN--- 60
Query: 49 FDDLATTSIDDDLKAWDADLV 69
++ T ++LK WD +
Sbjct: 61 -ENSDTDEQKEELKNWDKAFI 80
>gi|115438364|ref|XP_001218047.1| glycoprotein FP21 precursor [Aspergillus terreus NIH2624]
gi|121733969|sp|Q0CA59.1|SKP1_ASPTN RecName: Full=E3 ubiquitin ligase complex SCF subunit sconC;
AltName: Full=Sulfur controller C; AltName: Full=Sulfur
metabolite repression control protein C
gi|114188862|gb|EAU30562.1| glycoprotein FP21 precursor [Aspergillus terreus NIH2624]
Length = 161
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 9 VFEHMIEDDCAV-DRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWD 65
+ ++M+ED + IP+PNV + K I++C H D S DD + D+ WD
Sbjct: 29 LIKNMLEDLGETGEAIPIPNVNEAVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEWD 88
Query: 66 ADLVKVD 72
++VD
Sbjct: 89 QKFMQVD 95
>gi|426263310|emb|CCG34075.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 163
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVD-RIPLPNVTIKIFYKAIKY-CNKHDEA 46
L+SSD +VF ++M+ED D IPLPNVT I K I+Y + H+
Sbjct: 11 LESSDNKVFTVPTGVAQQSVTIKNMLEDIGDADAPIPLPNVTGYILEKVIEYLVHHHEHP 70
Query: 47 SMFDDLATTSIDDDLKAWDADLVKVD 72
D D++ WD D VD
Sbjct: 71 DPVVDEKDEKRTDNISGWDKDFCNVD 96
>gi|70953790|ref|XP_745974.1| Skp1 family protein [Plasmodium chabaudi chabaudi]
gi|56526459|emb|CAH81465.1| Skp1 family protein, putative [Plasmodium chabaudi chabaudi]
Length = 161
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH-----DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D IPLPN+ +I K I+Y H DE L T+++ D + WD D V D
Sbjct: 40 DTIPLPNIKTQILKKIIEYMEYHIHNPPDEIP--KPLITSNLQDVVSVWDYDFVNTD 94
>gi|402225301|gb|EJU05362.1| E3 ubiquitin ligase SCF complex Skp subunit [Dacryopinax sp.
DJM-731 SS1]
Length = 159
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 28/94 (29%)
Query: 2 LKSSDGEVF-------------EHMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEAS 47
L +SD E F ++M+ED D+ IPLPNVT + K +++C H
Sbjct: 4 LTTSDNETFTVDKKVAEKSVLIKNMLEDVGESDQAIPLPNVTASVLKKVLEWCEHHK--- 60
Query: 48 MFDDLATTSIDD---------DLKAWDADLVKVD 72
DD A +D D+ WD + VD
Sbjct: 61 --DDPAPPENEDKDDTRKRTTDISEWDQKFIAVD 92
>gi|156101517|ref|XP_001616452.1| S-phase kinase-associated protein 1A [Plasmodium vivax Sal-1]
gi|148805326|gb|EDL46725.1| S-phase kinase-associated protein 1A, putative [Plasmodium vivax]
Length = 162
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D IPLPN+ I K I+Y H + L T+++ D + +WD D V D
Sbjct: 41 DTIPLPNIKTPILKKIIEYMEYHINNPAEEIPKPLITSNLQDVVSSWDYDFVNTD 95
>gi|226492463|ref|NP_001148633.1| SKP1-like protein 1B [Zea mays]
gi|195620972|gb|ACG32316.1| SKP1-like protein 1B [Zea mays]
Length = 131
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 13/66 (19%)
Query: 17 DCAVDRIPLPNVTIKIFYKAIKYCNKHD----------EASMFDDLATTSIDDDLKAWDA 66
DC IP+ NV KI K I YC KH E S + A+ DDLK++DA
Sbjct: 3 DCDDSDIPVFNVNAKILDKVIAYCRKHXLXPXPDGXDAEPSXASNKASA---DDLKSFDA 59
Query: 67 DLVKVD 72
+ V VD
Sbjct: 60 EFVDVD 65
>gi|195489151|ref|XP_002092616.1| GE11566 [Drosophila yakuba]
gi|194178717|gb|EDW92328.1| GE11566 [Drosophila yakuba]
Length = 172
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 2 LKSSDGEVFEHMIE------------DDCAVDR-----IPLPNVTIKIFYKAIKYCNKHD 44
L+SSDG++F+ IE +DC ++ IPLPNV I K + + H
Sbjct: 6 LQSSDGKIFDTDIETAKCSSTIKTLLEDCPLEAENDTLIPLPNVNSAILKKVLTWAEHHP 65
Query: 45 EASMFDDLATTSIDD-DLKAWDADLVKVD 72
E + ++ + + AWDA+ + +D
Sbjct: 66 EDNAEENEGEAARPMVQISAWDAEFLAMD 94
>gi|296418125|ref|XP_002838692.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634653|emb|CAZ82883.1| unnamed protein product [Tuber melanosporum]
Length = 160
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 9 VFEHMIEDDCAV-DRIPLPNVTIKIFYKAIKYCNKHD---EASMFDDLATTSIDDDLKAW 64
+ ++M+ED V + IP+PNV + K I++C H A DD + D+ W
Sbjct: 26 LIKNMLEDVGEVTEAIPIPNVNENVLKKVIEWCEHHKGDPPAQADDDSDSRKKSSDIDEW 85
Query: 65 DADLVKVD 72
D ++VD
Sbjct: 86 DQKFMQVD 93
>gi|17563268|ref|NP_507857.1| Protein SKR-4 [Caenorhabditis elegans]
gi|6425369|emb|CAB60402.1| Protein SKR-4 [Caenorhabditis elegans]
Length = 159
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDD-DLKAWDADLVKVD 72
D IPLP VT I K I +C H DE + + + ++ WDA+ +KVD
Sbjct: 40 DTIPLPKVTSAILEKIITWCEHHADDEPKKVEKIEKGNKKTVEISEWDAEFMKVD 94
>gi|341895184|gb|EGT51119.1| hypothetical protein CAEBREN_03973 [Caenorhabditis brenneri]
gi|341898426|gb|EGT54361.1| hypothetical protein CAEBREN_05696 [Caenorhabditis brenneri]
Length = 171
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
IP+ NVT I K I +C H D A D DD+ +WD + +KVD
Sbjct: 54 IPVQNVTAPILKKVIAWCQYHYQDAAPTDDSDNREKRTDDIASWDVEFLKVD 105
>gi|157126871|ref|XP_001660986.1| skp1 [Aedes aegypti]
gi|108873117|gb|EAT37342.1| AAEL010651-PA [Aedes aegypti]
Length = 159
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 24/91 (26%)
Query: 2 LKSSDGEVFE-------------HMIED-----DCAVDRIPLPNVTIKIFYKAIKYC--N 41
L+S+DGEVFE MI+D DC D +PLPNV + K + + +
Sbjct: 6 LQSADGEVFEVEASIAKCSLTLRTMIDDLGIGQDCD-DVVPLPNVHSCVLRKVLDWAIYH 64
Query: 42 KHDEASMFDDLATTSIDDDLKAWDADLVKVD 72
KHD A DD T DD+ WD + + VD
Sbjct: 65 KHDHAIPADDPERT---DDICDWDREFLCVD 92
>gi|17542036|ref|NP_502902.1| Protein SKR-10 [Caenorhabditis elegans]
gi|17027140|gb|AAL34100.1|AF440512_1 SKR-10 [Caenorhabditis elegans]
gi|5824668|emb|CAB54358.1| Protein SKR-10 [Caenorhabditis elegans]
Length = 192
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 2 LKSSDGEVFE-------------HMI-----EDDCAVDRIPLPNVTIKIFYKAIKYCNKH 43
++S+DG VFE ++I ED ++D IP+ NVT I I++C KH
Sbjct: 23 VESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKH 82
Query: 44 DEASMFDDLATTSIDDDLKAWDADLVKVD 72
++ D + + WD + +K+D
Sbjct: 83 KGEALPVDDDSVPKHITVPEWDTNFLKID 111
>gi|50543590|ref|XP_499961.1| YALI0A10879p [Yarrowia lipolytica]
gi|49645826|emb|CAG83890.1| YALI0A10879p [Yarrowia lipolytica CLIB122]
Length = 162
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 4 SSDGEVFEHMIEDDCA-VDRIPLPNVTIKIFYKAIKYCNKH----------DEASMFDDL 52
+S + ++M+ED IP+PNV+ + K I+YC H DE + D
Sbjct: 19 ASRSALIKNMMEDIGEDAGEIPVPNVSSNVLKKVIEYCTYHKDDPLPQSGEDEGTSAADK 78
Query: 53 ATTSIDDDLKAWDADLVKVD 72
+++ DD WD + ++VD
Sbjct: 79 KKSTVIDD---WDYNFLQVD 95
>gi|154284083|ref|XP_001542837.1| sulfur metabolite repression control protein C [Ajellomyces
capsulatus NAm1]
gi|150411017|gb|EDN06405.1| sulfur metabolite repression control protein C [Ajellomyces
capsulatus NAm1]
Length = 176
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 9 VFEHMIED---DCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDD-----LATTSID 58
+ ++M+ED + IP+PNV + K I +C KH D S D+ TT ID
Sbjct: 40 LIKNMLEDVGEGSMEEEIPIPNVNRAVLEKVIAWCTKHQGDPPSTGDEDNDSRRKTTDID 99
Query: 59 DDLKAWDADLVKVD 72
+ WD ++VD
Sbjct: 100 E----WDQKFMQVD 109
>gi|240277273|gb|EER40782.1| sulfur metabolite repression control protein C [Ajellomyces
capsulatus H143]
Length = 197
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 9 VFEHMIED---DCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDD-----LATTSID 58
+ ++M+ED + IP+PNV + K I +C KH D S D+ TT ID
Sbjct: 45 LIKNMLEDVGEGSMEEEIPIPNVNRAVLEKVIAWCTKHQGDPPSTGDEDNDSRRKTTDID 104
Query: 59 DDLKAWDADLVKVD 72
+ WD ++VD
Sbjct: 105 E----WDQKFMQVD 114
>gi|225562184|gb|EEH10464.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325091813|gb|EGC45123.1| sulfur metabolite repression control protein C [Ajellomyces
capsulatus H88]
Length = 181
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 9 VFEHMIED---DCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDD-----LATTSID 58
+ ++M+ED + IP+PNV + K I +C KH D S D+ TT ID
Sbjct: 45 LIKNMLEDVGEGSMEEEIPIPNVNRAVLEKVIAWCTKHQGDPPSTGDEDNDSRRKTTDID 104
Query: 59 DDLKAWDADLVKVD 72
+ WD ++VD
Sbjct: 105 E----WDQKFMQVD 114
>gi|121712656|ref|XP_001273939.1| sulfur metabolism regulator SkpA, putative [Aspergillus clavatus
NRRL 1]
gi|302595846|sp|A1C9U5.1|SKP1_ASPCL RecName: Full=E3 ubiquitin ligase complex SCF subunit sconC;
AltName: Full=Sulfur controller C; AltName: Full=Sulfur
metabolite repression control protein C
gi|119402092|gb|EAW12513.1| sulfur metabolism regulator SkpA, putative [Aspergillus clavatus
NRRL 1]
Length = 159
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 9 VFEHMIED-DCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWD 65
+ ++M+ED + + IP+PNV + K I++C H D S DD + D+ WD
Sbjct: 27 LIKNMLEDLGESGEAIPIPNVNEVVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEWD 86
Query: 66 ADLVKVD 72
++VD
Sbjct: 87 QKFMQVD 93
>gi|261189462|ref|XP_002621142.1| sulfur metabolite repression control protein C [Ajellomyces
dermatitidis SLH14081]
gi|239591719|gb|EEQ74300.1| sulfur metabolite repression control protein C [Ajellomyces
dermatitidis SLH14081]
gi|239608967|gb|EEQ85954.1| sulfur metabolite repression control protein C [Ajellomyces
dermatitidis ER-3]
gi|327354015|gb|EGE82872.1| sulfur metabolite repression control protein C [Ajellomyces
dermatitidis ATCC 18188]
Length = 181
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 9 VFEHMIED---DCAVDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDD-----LATTSID 58
+ ++M+ED + IP+PNV + K I +C KH D S D+ TT ID
Sbjct: 45 LIKNMLEDVGGGSVEEEIPIPNVNRAVLEKVIAWCTKHQDDPPSTGDEDNDSRRRTTDID 104
Query: 59 DDLKAWDADLVKVD 72
+ WD ++VD
Sbjct: 105 E----WDQKFMQVD 114
>gi|125810723|ref|XP_001361595.1| GA21386 [Drosophila pseudoobscura pseudoobscura]
gi|54636771|gb|EAL26174.1| GA21386 [Drosophila pseudoobscura pseudoobscura]
Length = 162
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH-DEASMFD-DLATTSIDDDLKAWDADLVKVD 72
+PLPNV I K + + H D+A + + D DD+ +WDAD +KVD
Sbjct: 43 LPLPNVNSLILKKVLHWATYHKDDAELAEEDENKEKRTDDISSWDADFLKVD 94
>gi|268564747|ref|XP_002639210.1| C. briggsae CBR-SKR-1 protein [Caenorhabditis briggsae]
Length = 172
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 20 VDRIPLPNVTIKIFYKAIKYCNKH--DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D IP+ NV+ I K I +C H D A D DD+ +WD + +KVD
Sbjct: 52 TDPIPVQNVSSPILKKVISWCQYHYQDTAPADDQDNREKRTDDIASWDVEFLKVD 106
>gi|194893205|ref|XP_001977833.1| GG19259 [Drosophila erecta]
gi|190649482|gb|EDV46760.1| GG19259 [Drosophila erecta]
Length = 157
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 LKSSDGEVFEHMIE------------DDCAV-----DRIPLPNVTIKIFYKAIKYCNKH- 43
L+SSDG +F+ ++ + AV D +PLPNV I K + + + H
Sbjct: 8 LQSSDGVIFQTTVQAASLSKTIKTLLEIAAVENDEDDIVPLPNVGSFILDKILAWAHHHK 67
Query: 44 -DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D +D + DD+ WDA+ + VD
Sbjct: 68 DDPQLTSNDEESQGCSDDISPWDANFMNVD 97
>gi|195154216|ref|XP_002018018.1| GL16990 [Drosophila persimilis]
gi|194113814|gb|EDW35857.1| GL16990 [Drosophila persimilis]
Length = 162
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH-DEASMFD-DLATTSIDDDLKAWDADLVKVD 72
+PLPNV I K + + H D+A + + D DD+ +WDAD +KVD
Sbjct: 43 LPLPNVNSLILKKVLHWATYHKDDAELAEEDENKEKRTDDISSWDADFLKVD 94
>gi|195024341|ref|XP_001985855.1| GH20861 [Drosophila grimshawi]
gi|193901855|gb|EDW00722.1| GH20861 [Drosophila grimshawi]
Length = 162
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH--DEASM-FDDLATTSIDDDLKAWDADLVKVD 72
+PLPNV I K + + H DE +D DD+ +WDAD +KVD
Sbjct: 43 LPLPNVNSAILRKVLHWATYHAQDEPQQPQEDENKEKRTDDISSWDADFLKVD 95
>gi|22093764|dbj|BAC07055.1| putative Skp1(S-phase kinase-associated protein1) [Oryza sativa
Japonica Group]
gi|22535690|dbj|BAC10864.1| putative Skp1(S-phase kinase-associated protein 1) [Oryza sativa
Japonica Group]
Length = 170
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 19/82 (23%)
Query: 2 LKSSDGEVFE---------HMIEDDCAVDR----IPLPNVTIKIFYKAIKYCNKH-DEAS 47
LKSSDGE E +I D R IPLP+V K K I+YC++H +E S
Sbjct: 18 LKSSDGEPVEVTEASARISKVIGDKIDAGRGGEAIPLPHVDKKTLKKVIEYCDEHANENS 77
Query: 48 MFDDLATTSIDDDLKAWDADLV 69
D+ ++LK WD +
Sbjct: 78 DTDEQK-----EELKNWDKAFI 94
>gi|224010183|ref|XP_002294049.1| hypothetical protein THAPSDRAFT_10077 [Thalassiosira pseudonana
CCMP1335]
gi|220970066|gb|EED88404.1| hypothetical protein THAPSDRAFT_10077 [Thalassiosira pseudonana
CCMP1335]
Length = 176
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 22 RIPLPNVTIKIFYKAIKYCNKHDEASM---FDDLATTSIDDDLKAWDADLVKVD 72
IPLPNV + K I+YC +++ M L + I++ ++ W A V V+
Sbjct: 52 EIPLPNVKSSVLAKVIEYCTHYNQDPMTPITTPLKSNRIEEIVQEWYAHFVDVE 105
>gi|398393144|ref|XP_003850031.1| hypothetical protein MYCGRDRAFT_105450 [Zymoseptoria tritici
IPO323]
gi|339469909|gb|EGP85007.1| hypothetical protein MYCGRDRAFT_105450 [Zymoseptoria tritici
IPO323]
Length = 165
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 9 VFEHMIEDDCAVDRIPLP--NVTIKIFYKAIKYCNKH--DEASMFDDLA-----TTSIDD 59
+ ++MIED A P+P NV+ + K +++CN H D A DD A TT I+D
Sbjct: 30 LIKNMIEDLGAPGEEPIPIMNVSEAVLRKVLEWCNHHKNDPAPTQDDDADSRKKTTDIED 89
Query: 60 DLKAWDADLVKVD 72
WD ++VD
Sbjct: 90 ----WDQKFMQVD 98
>gi|392595628|gb|EIW84951.1| E3 ubiquitin ligase SCF complex Skp subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 161
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 4 SSDGEVFE------HMIEDDCAVDR-IPLPNVTIKIFYKAIKYCNKHDEASM------FD 50
++D EV E +M+ED D+ IPLPNV+ + K ++YC H + +
Sbjct: 13 TADKEVVERSVLIKNMLEDVGESDQPIPLPNVSSSVLKKVLEYCEHHRGEPLPSADTDQN 72
Query: 51 DLATTSIDDDLKAWDADLVKVD 72
T D+ WD + VD
Sbjct: 73 QDETRKRTTDISEWDQKFITVD 94
>gi|170056998|ref|XP_001864284.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876571|gb|EDS39954.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 168
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 23 IPLPNVTIKIFYKAIKYCNKH---DEASMFDDLATTSID---DDLKAWDADLVKVD 72
IP+P V I K +++ N H D+ + ++ S + DD+ +WDAD +KVD
Sbjct: 46 IPVPQVNSAILGKVLQWANYHKDDDDVELAEEEEFQSKEKRTDDIGSWDADFLKVD 101
>gi|389584382|dbj|GAB67114.1| S-phase kinase-associated protein 1A [Plasmodium cynomolgi strain
B]
Length = 162
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 21 DRIPLPNVTIKIFYKAIKYCNKH-----DEASMFDDLATTSIDDDLKAWDADLVKVD 72
D IPLPN+ I K I+Y H DE L T+++ D + +WD D V D
Sbjct: 41 DTIPLPNIKTPILKKIIEYMEYHINNPADEIP--KPLITSNLQDVVSSWDYDFVNTD 95
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,124,466,353
Number of Sequences: 23463169
Number of extensions: 35711151
Number of successful extensions: 76169
Number of sequences better than 100.0: 602
Number of HSP's better than 100.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 75352
Number of HSP's gapped (non-prelim): 606
length of query: 72
length of database: 8,064,228,071
effective HSP length: 44
effective length of query: 28
effective length of database: 7,031,848,635
effective search space: 196891761780
effective search space used: 196891761780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)