Your job contains 1 sequence.
>040580
METFSLSLHGSFKFKRFNVPSHQTHPKNGDLARKIIRYRKQEGFVDCASLVEDLGRKKKP
HLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQVVWEELLSSSFVLSVQVLSDL
MDAYGRIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGF
SVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGE
FLRDVGLGRKDLGNLLWNLLLLSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFS
RMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDSPVVST
DPYVFEAFGKGDFHSSSEAFLEFKRQRKWTYRKLIAVYLKKQLRRNQIFWNY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040580
(412 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096544 - symbol:AT3G42630 species:3702 "Arabi... 1078 4.3e-109 1
TAIR|locus:2129475 - symbol:AT4G14190 "AT4G14190" species... 241 5.9e-18 1
TAIR|locus:2151281 - symbol:AT5G02860 species:3702 "Arabi... 152 1.8e-07 1
TAIR|locus:2157607 - symbol:AT5G42310 species:3702 "Arabi... 150 2.5e-07 1
TAIR|locus:505006535 - symbol:AT4G30825 "AT4G30825" speci... 141 3.4e-06 1
TAIR|locus:2116772 - symbol:PGR3 "AT4G31850" species:3702... 142 3.4e-06 1
TAIR|locus:2039558 - symbol:AT2G26790 species:3702 "Arabi... 95 4.2e-06 2
TAIR|locus:2027166 - symbol:PTAC2 "plastid transcriptiona... 138 6.8e-06 1
TAIR|locus:2019085 - symbol:AT1G74580 "AT1G74580" species... 137 7.5e-06 1
TAIR|locus:2081041 - symbol:PPR2 "pentatricopeptide repea... 133 1.1e-05 1
TAIR|locus:2077061 - symbol:AT3G22470 "AT3G22470" species... 133 1.6e-05 1
TAIR|locus:2060226 - symbol:AT2G32630 "AT2G32630" species... 130 3.4e-05 1
TAIR|locus:2044430 - symbol:AT2G18940 species:3702 "Arabi... 131 3.8e-05 1
TAIR|locus:2027212 - symbol:AT1G74750 species:3702 "Arabi... 129 6.6e-05 1
TAIR|locus:2150024 - symbol:AT5G01110 species:3702 "Arabi... 94 7.3e-05 2
TAIR|locus:2015218 - symbol:AT1G63070 species:3702 "Arabi... 125 0.00011 1
TAIR|locus:2015228 - symbol:AT1G63080 species:3702 "Arabi... 125 0.00012 1
TAIR|locus:2181286 - symbol:EMB976 "AT5G27270" species:37... 131 0.00019 2
TAIR|locus:2061310 - symbol:GUN1 "AT2G31400" species:3702... 125 0.00020 1
UNIPROTKB|B8ZZ38 - symbol:LRPPRC "Leucine-rich PPR motif-... 118 0.00025 2
TAIR|locus:2025442 - symbol:AT1G01970 "AT1G01970" species... 119 0.00029 1
UNIPROTKB|C9JCA9 - symbol:LRPPRC "Leucine-rich PPR motif-... 118 0.00030 1
TAIR|locus:2122561 - symbol:EMB2453 "EMBRYO DEFECTIVE 245... 122 0.00032 2
TAIR|locus:2077637 - symbol:AT3G06920 "AT3G06920" species... 94 0.00035 2
TAIR|locus:2124137 - symbol:DOT4 "DEFECTIVELY ORGANIZED T... 122 0.00039 1
TAIR|locus:2827701 - symbol:AT2G17140 species:3702 "Arabi... 120 0.00066 1
TAIR|locus:2015208 - symbol:AT1G63130 species:3702 "Arabi... 118 0.00072 1
TAIR|locus:2026192 - symbol:RPF2 "rna processing factor 2... 117 0.00092 1
>TAIR|locus:2096544 [details] [associations]
symbol:AT3G42630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AL138640 EMBL:AF378864 EMBL:AY057743
IPI:IPI00522583 PIR:T47321 RefSeq:NP_566863.2 UniGene:At.19095
ProteinModelPortal:Q9M2A1 IntAct:Q9M2A1 PRIDE:Q9M2A1
EnsemblPlants:AT3G42630.1 GeneID:823280 KEGG:ath:AT3G42630
TAIR:At3g42630 eggNOG:NOG283351 HOGENOM:HOG000242910
InParanoid:Q9M2A1 OMA:GCVVDAY PhylomeDB:Q9M2A1
ProtClustDB:CLSN2680883 Genevestigator:Q9M2A1 Uniprot:Q9M2A1
Length = 415
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 220/414 (53%), Positives = 281/414 (67%)
Query: 6 LSLHGSFKFKRFNVPSHQTHPKNGDLARKIIRYRK-QEGF------VDCASLVEDLGRKK 58
LSL+ S K + + S T +A+K+I+ K F VD A LV+ L +++
Sbjct: 2 LSLNLSLKPQHLKLLSCYTDSSAPSIAKKLIKESKLSRDFSQKIQIVDYAPLVQTLSQRR 61
Query: 59 KPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXX 118
P +AH++ KS LLP+ TLCALMLC+A NGFVL A+
Sbjct: 62 LPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEIINSCFVPDVFVVS 121
Query: 119 XXMDAYGRIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSR 178
+ AY + GCF+E+ I V+ R++ LLP V S AISCFGK GQLELME ++EM S+
Sbjct: 122 KLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQLELMEGVIEEMDSK 181
Query: 179 GFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFML 238
G +++ T N + YYS FGSL +ME AYGR+K+ +I++E IRAV YLK+RKF+ L
Sbjct: 182 GVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAVVLAYLKQRKFYRL 241
Query: 239 GEFLRDVGLGRKDXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVA 298
EFL DVGLGR++ SYA +FKMKSLQREF+ M +AGF PDLTTFNIRA+A
Sbjct: 242 REFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGFSPDLTTFNIRALA 301
Query: 299 FSRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDSPVV 358
FSRM++FWDLHL+LEHM+ ++ PDLVT+GCVVDAY+DKRL RNL+F ++MNLDDSP+V
Sbjct: 302 FSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEFVYNRMNLDDSPLV 361
Query: 359 STDPYVFEAFGKGDFHSSSEAFLEFKRQRKWTYRKLIAVYLKKQLRRNQIFWNY 412
TDP FE GKGDFH SSEA LEF ++ WTYRKLI VYLKK+LRR+QIFWNY
Sbjct: 362 LTDPLAFEVLGKGDFHLSSEAVLEFSPRKNWTYRKLIGVYLKKKLRRDQIFWNY 415
>TAIR|locus:2129475 [details] [associations]
symbol:AT4G14190 "AT4G14190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR002885 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97335 EMBL:AL161538 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:BX827455 IPI:IPI00529576
PIR:D71403 RefSeq:NP_193155.4 UniGene:At.45814
ProteinModelPortal:O23278 SMR:O23278 PRIDE:O23278
EnsemblPlants:AT4G14190.1 GeneID:827059 KEGG:ath:AT4G14190
TAIR:At4g14190 eggNOG:NOG312836 HOGENOM:HOG000115636
InParanoid:O23278 OMA:FWAVIRF PhylomeDB:O23278
ProtClustDB:CLSN2681602 Genevestigator:O23278 Uniprot:O23278
Length = 501
Score = 241 (89.9 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 87/339 (25%), Positives = 144/339 (42%)
Query: 75 LLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEII 134
L P +++ YA++G EA ++AYG+ ++EI+
Sbjct: 163 LSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIV 222
Query: 135 SIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYY 194
+ ++ Y+ I F + G L+ ME + ++SR +++ +T + + Y
Sbjct: 223 LCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLLSMLEAY 282
Query: 195 SRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXX 254
+ FG + +ME ++ R +D+ +R ++ Y++ F L + R + R
Sbjct: 283 AEFGLIEKMEETCNKIIRFGISLDEGLVRKLANVYIENLMFSRLDDLGRGISASRTRRTE 342
Query: 255 XXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTF-NIRAVAFSRMSMFWDLHLSLE 313
+A K L M EA P TTF NI +A+S+M F + L L
Sbjct: 343 LAWCLRLLCHARLVSRKGLDYVVKEMEEARV-PWNTTFANIALLAYSKMGDFTSIELLLS 401
Query: 314 HMKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDSPV-VSTDPYVFEAFGKGD 372
++ + V DLVT G V D + G + K+ D PV + TDP V AFGKG
Sbjct: 402 ELRIKHVKLDLVTVGIVFDLSEARFDGTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGQ 461
Query: 373 FHSSSEAFLEFKRQ---------RKWTYRKLIAVYLKKQ 402
F S E E K Q + WTY+ L+ + +K Q
Sbjct: 462 FLRSCE---EVKNQSLGTRDGESKSWTYQYLMELVVKNQ 497
>TAIR|locus:2151281 [details] [associations]
symbol:AT5G02860 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL162973 Pfam:PF01535
TIGRFAMs:TIGR00756 eggNOG:NOG320495 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000241317 ProtClustDB:CLSN2683067 IPI:IPI00538555
PIR:T48307 RefSeq:NP_195906.1 UniGene:At.54692
ProteinModelPortal:Q9LYZ9 SMR:Q9LYZ9 PaxDb:Q9LYZ9 PRIDE:Q9LYZ9
EnsemblPlants:AT5G02860.1 GeneID:831761 KEGG:ath:AT5G02860
TAIR:At5g02860 InParanoid:Q9LYZ9 OMA:NTLISCC PhylomeDB:Q9LYZ9
Genevestigator:Q9LYZ9 Uniprot:Q9LYZ9
Length = 819
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 64/273 (23%), Positives = 98/273 (35%)
Query: 66 LVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYG 125
LV +KS+G+ PD T L+ C EA +D YG
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 126 RIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQL-ELMENTLK-EMVSRGFSVD 183
+ E + +++++ Y+ IS + + G L E ME LK +M +G D
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME--LKNQMAEKGTKPD 383
Query: 184 SATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGI---RAVSFTYLKERKFFMLGE 240
T + + R G ++E+A + R+ K I A Y KF + +
Sbjct: 384 VFTYTTLLSGFERAG---KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 241 FLRDVGLGRKDXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFS 300
++ + + N + F M AGF P+ TFN A+S
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 301 RMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDA 333
R F M V PDL TY V+ A
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Score = 146 (56.5 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 79/371 (21%), Positives = 131/371 (35%)
Query: 21 SHQTHPKNGDLARKIIRYRKQEGF----VDCASLVEDLGRKKKPHLAHQLVNTVKSEGLL 76
SH+ PK A K++ GF V SL+ R A +L N + +G
Sbjct: 327 SHR--PKE---AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 77 PDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISI 136
PD T L+ + G V A + YG G F E++ I
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 137 IDQVSCRNADLLPEV--YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYY 194
D+++ L P++ ++ ++ FG+ G + KEM GF + T N I Y
Sbjct: 442 FDEINV--CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 195 SRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXX 254
SR GS + T Y R+ + D V + + + L ++ GR
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 255 XXXXXXXXSYAGNFKMKSLQREFMRMSEAG-FHPDLTTFNIRAVAFSRMSMFWDLHLSLE 313
+YA N K L +G P + S+ + + +
Sbjct: 560 LTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 314 HMKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDD-SPVVST-DPYVFEAFGKG 371
+K PD+ T +V Y +++ + L M +P ++T + ++
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 372 DFHSSSEAFLE 382
DF S E E
Sbjct: 679 DFGKSEEILRE 689
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 70/377 (18%), Positives = 141/377 (37%)
Query: 27 KNGDL---ARKIIRYRKQEGF----VDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDN 79
K G L A ++ K GF V +L++ G+ +P A +++N + G P
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 80 STLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQ 139
T +L+ YA +G + EA + + R G +SI ++
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 140 VSCRNADLLPEV--YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRF 197
+ RNA P + ++ I +G +G+ M E+ G S D T N + + +
Sbjct: 410 M--RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 198 GSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLR---DVGLGRKDXXX 254
G +E+ + +KR+ + ++E + Y + F R D G+ D
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV-TPDLST 526
Query: 255 XXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEH 314
+ G ++ ++ M + P+ T+ A++ +H E
Sbjct: 527 YNTVLAALARGGMWEQS--EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 315 MKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDD-SPVVSTDPYVFEAFGKGDF 373
+ + P V +V L + S++ SP ++T + +G+
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 374 HSSSEAFLEFKRQRKWT 390
+ + L++ ++R +T
Sbjct: 645 VAKANGVLDYMKERGFT 661
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 65/329 (19%), Positives = 119/329 (36%)
Query: 78 DNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISII 137
DNS + ++ G V A + A+ G + E +++
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 138 DQVSCRNADLLPEVYSRAISCFGKQGQ-LELMENTLKEMVSRGFSVDSATGNAFIIYYSR 196
++ Y+ ++ FGK G + + +++M S G + D+ T N I R
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 197 FGSL-TEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXX 255
GSL E + +K + DK A+ Y K + + L ++ L
Sbjct: 292 -GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 256 XXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHM 315
+YA + + +M+E G PD+ T+ F R E M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 316 KHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDD-SPVVSTDPYVFEAFGKGDFH 374
++ P++ T+ + Y ++ + ++N+ SP + T + FG+
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 375 SS-SEAFLEFKRQ----RKWTYRKLIAVY 398
S S F E KR + T+ LI+ Y
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAY 499
Score = 128 (50.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 58/266 (21%), Positives = 98/266 (36%)
Query: 74 GLLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAY--GR-IGCF 130
G+ PD ST ++ A G +++ + AY G+ IG
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578
Query: 131 NEIIS-IIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNA 189
+ + + V A LL + + C K L E E+ RGFS D T N+
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTL---VLVC-SKCDLLPEAERAFSELKERGFSPDITTLNS 634
Query: 190 FIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDV-GLG 248
+ Y R + + +K ++ + + + F E LR++ G
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 249 RKDXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDL 308
K +Y N +M+ R F M +G PD+ T+N +++ SMF +
Sbjct: 695 IKPDIISYNTVIY-AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 309 HLSLEHMKHESVGPDLVTYGCVVDAY 334
+ +M P+ TY +VD Y
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGY 779
>TAIR|locus:2157607 [details] [associations]
symbol:AT5G42310 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
Gene3D:1.25.40.10 EMBL:AB023032 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
EMBL:AY120753 IPI:IPI00532989 RefSeq:NP_199046.1 UniGene:At.49121
UniGene:At.71047 ProteinModelPortal:Q8L844 SMR:Q8L844 STRING:Q8L844
PaxDb:Q8L844 PRIDE:Q8L844 EnsemblPlants:AT5G42310.1 GeneID:834236
KEGG:ath:AT5G42310 TAIR:At5g42310 eggNOG:NOG268468
HOGENOM:HOG000006396 InParanoid:Q8L844 OMA:AGRWESA PhylomeDB:Q8L844
ProtClustDB:CLSN2686583 Genevestigator:Q8L844 Uniprot:Q8L844
Length = 709
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 69/352 (19%), Positives = 124/352 (35%)
Query: 40 KQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQ 99
K V S + D GR + A L ++ G+ P AL+ Y G + +A+
Sbjct: 303 KTATLVSIISALADSGRTLE---AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE 359
Query: 100 XXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPE--VYSRAIS 157
+DAY G + ++ ++ D+ P V+SR ++
Sbjct: 360 SMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA--GDVQPNSFVFSRLLA 417
Query: 158 CFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLI 217
F +G+ + LKEM S G D N I + +F L T + R+
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Query: 218 DKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXX--XXXXXXXXXSYAGNFKMKSLQR 275
D+ + + K + + E + R+ SY + ++R
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFE--AMERRGCLPCATTYNIMINSYGDQERWDDMKR 535
Query: 276 EFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYL 335
+M G P++ T + + F D LE MK + P Y +++AY
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 336 DKRLGRNLDFGLSKMNLDD-SPVVSTDPYVFEAFGKGDFHSSSEAFLEFKRQ 386
+ L M D P + + AFG+ + + A L++ ++
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 647
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 47/216 (21%), Positives = 82/216 (37%)
Query: 121 MDAYGRIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGF 180
+D +G+ C + ++ D++ + ++ I C K G+ + E + M RG
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 181 SVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGE 240
+ T N I Y +M+ G++K L + + Y K +F E
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 241 FLRDV-GLGRKDXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAF 299
L ++ +G K +YA + F M+ G P L N AF
Sbjct: 571 CLEEMKSVGLKPSSTMYNALIN-AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 629
Query: 300 SRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYL 335
+ L++MK V PD+VTY ++ A +
Sbjct: 630 GEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI 665
>TAIR|locus:505006535 [details] [associations]
symbol:AT4G30825 "AT4G30825" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR004575
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005634 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0007049
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL022198 EMBL:AL161577
Pfam:PF01535 TIGRFAMs:TIGR00756 PANTHER:PTHR12683 EMBL:AL109787
IPI:IPI00526092 PIR:G85360 RefSeq:NP_567856.1 UniGene:At.31802
ProteinModelPortal:O65567 SMR:O65567 IntAct:O65567 STRING:O65567
PaxDb:O65567 PRIDE:O65567 EnsemblPlants:AT4G30825.1 GeneID:829206
KEGG:ath:AT4G30825 TAIR:At4g30825 eggNOG:NOG298681
HOGENOM:HOG000243149 InParanoid:O65567 OMA:MITIYTR PhylomeDB:O65567
ProtClustDB:CLSN2689691 Genevestigator:O65567 Uniprot:O65567
Length = 904
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/186 (19%), Positives = 80/186 (43%)
Query: 150 EVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGR 209
E+Y+ I+C + L+ + T +EM+ GF+ ++ T N + Y + ++ +
Sbjct: 665 EMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF-- 722
Query: 210 LKRSRH-LIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXXXXXXXXXSYAGNF 268
L RH ++D + Y K + + + ++++ +Y +
Sbjct: 723 LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 269 KMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVTYG 328
+M+ + RM ++ PD T+NI + ++ L+ +K +GPDL +Y
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYN 842
Query: 329 CVVDAY 334
++ AY
Sbjct: 843 TLIKAY 848
>TAIR|locus:2116772 [details] [associations]
symbol:PGR3 "AT4G31850" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0000272
"polysaccharide catabolic process" evidence=RCA] [GO:0005982
"starch metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0046777 "protein autophosphorylation" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161579 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL049607
UniGene:At.24222 UniGene:At.66570 eggNOG:NOG320495 Pfam:PF12854
Pfam:PF13041 IPI:IPI00517379 PIR:T06307 RefSeq:NP_194913.1
ProteinModelPortal:Q9SZ52 SMR:Q9SZ52 STRING:Q9SZ52 PaxDb:Q9SZ52
PRIDE:Q9SZ52 EnsemblPlants:AT4G31850.1 GeneID:829314
KEGG:ath:AT4G31850 TAIR:At4g31850 HOGENOM:HOG000005824
InParanoid:Q9SZ52 OMA:TICIRVL PhylomeDB:Q9SZ52
ProtClustDB:CLSN2685984 Genevestigator:Q9SZ52 Uniprot:Q9SZ52
Length = 1112
Score = 142 (55.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 64/245 (26%), Positives = 104/245 (42%)
Query: 150 EVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGR 209
+ YS + GK+ ++ + LKEM + G + T I R G + E AY
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE---AYEI 280
Query: 210 LKRSRHLIDKEGIR--AVSFTYLKE-----RKFFMLGEFLRDVGLGRKDXXXXXXXXXXX 262
LKR +D EG V++T L + RK E + GR
Sbjct: 281 LKR----MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 263 SYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGP 322
++ N + S+++ + M + G PD+ TF I A + F + +L+ M+ + + P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 323 DLVTYGCVVDAYLD-KRLGRNLD-FGLSKMNLDDSPVVSTDPYVFEAFGK-GDFHSSSEA 379
+L TY ++ L RL L+ FG + +L P T + +GK GD S+ E
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFG-NMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 380 FLEFK 384
F + K
Sbjct: 456 FEKMK 460
>TAIR|locus:2039558 [details] [associations]
symbol:AT2G26790 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005168
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
IPI:IPI00538255 PIR:T02656 RefSeq:NP_180247.1 UniGene:At.66249
ProteinModelPortal:O81028 SMR:O81028 PRIDE:O81028
EnsemblPlants:AT2G26790.1 GeneID:817220 KEGG:ath:AT2G26790
GeneFarm:4932 TAIR:At2g26790 eggNOG:NOG311688 HOGENOM:HOG000090566
InParanoid:O81028 OMA:VIIEGLC PhylomeDB:O81028
ProtClustDB:CLSN2913640 Genevestigator:O81028 Uniprot:O81028
Length = 799
Score = 95 (38.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 270 MKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVTYGC 329
++ Q F M E G PDL T+ I + R++ E MK + PD+VTY
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 330 VVDAYL 335
++D YL
Sbjct: 667 LLDRYL 672
Score = 92 (37.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 43/187 (22%), Positives = 78/187 (41%)
Query: 32 ARKIIRYRKQEGF-VDCASLVEDLGRK-KKPHLAHQL--VNTVKSEGLLPDNSTLCALML 87
A +I ++ GF +D + + + R K +L L ++ + +GL N + +L+L
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKV-NCVIVSLIL 360
Query: 88 -CYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNAD 146
CY LEA DA ++G E ++ ++ R
Sbjct: 361 QCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG-- 418
Query: 147 LLPEV--YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEME 204
++P+V Y+ I + QG++ + + EM+ G S D T N + +R G E+
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Query: 205 TAYGRLK 211
Y R+K
Sbjct: 479 EIYERMK 485
>TAIR|locus:2027166 [details] [associations]
symbol:PTAC2 "plastid transcriptionally active 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA;IMP]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0006399 "tRNA
metabolic process" evidence=RCA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
INTERPRO:IPR002625 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 GO:GO:0045893 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008263 EMBL:AC013258 Pfam:PF01535 TIGRFAMs:TIGR00756
SMART:SM00463 PROSITE:PS50828 GO:GO:0009508 Pfam:PF13041
IPI:IPI00541880 PIR:A96778 RefSeq:NP_177623.1 UniGene:At.34835
ProteinModelPortal:Q9S7Q2 SMR:Q9S7Q2 PaxDb:Q9S7Q2 PRIDE:Q9S7Q2
EnsemblPlants:AT1G74850.1 GeneID:843824 KEGG:ath:AT1G74850
GeneFarm:4803 TAIR:At1g74850 eggNOG:NOG288369 HOGENOM:HOG000029475
InParanoid:Q9S7Q2 OMA:GSIARCL PhylomeDB:Q9S7Q2
ProtClustDB:CLSN2682291 Genevestigator:Q9S7Q2 GO:GO:0042793
Uniprot:Q9S7Q2
Length = 862
Score = 138 (53.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 54/269 (20%), Positives = 108/269 (40%)
Query: 121 MDAYGRIGCFNEIISIIDQVSCRNADLLPEV--YSRAISCFGKQG-QLELMENTLKEMVS 177
++AYGR G + + ++D++ +N + P + Y+ I+ + G E + EM
Sbjct: 183 INAYGRNGRYETSLELLDRM--KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 178 RGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFM 237
G D T N + + G E E + + + D + T+ K R+
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 238 LGEFLRDVGLGRKDXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAV 297
+ + L ++ G +YA + +K F +M AG P+ T+++
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 298 AFSRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYLDKRLGRN---LDFGLSKMNLDD 354
F + + D+ MK + PD TY +++ + + + L + + N++
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE- 419
Query: 355 SPVVSTDPYVFEAFGKGDFHSSSEAFLEF 383
P + T + A GKG H + L++
Sbjct: 420 -PDMETYEGIIFACGKGGLHEDARKILQY 447
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 76/383 (19%), Positives = 136/383 (35%)
Query: 29 GDLARKIIRYRKQEGFV-DCAS---LVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCA 84
GD A + R G V D + LVE G+ ++ L+ + S G LPD ++
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 85 LMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRN 144
L+ YA +G + EA ++ +G+ G ++++ + ++ N
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 145 ADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEME 204
D Y+ I FG+ G + + +MV D T II+ G L E
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG-IIFACGKGGLHEDA 441
Query: 205 TAYGRLKRSRHLIDKE----G-IRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXXXXXX 259
+ + ++ G I A L E + +VG +
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT-MHEVG---SNPSIETFHS 497
Query: 260 XXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHES 319
S+A +K + R+ ++G + TFN + A+ + F + + M+
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 320 VGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDS-PVVSTDPYVFEAFGKGD-FHSSS 377
PD T V+ Y RL +M D P + + +GK + + +
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 378 EAFLEFKRQRKWTYRKLIAVYLK 400
E E R ++I +K
Sbjct: 618 ELLEEMLSNRVSNIHQVIGQMIK 640
>TAIR|locus:2019085 [details] [associations]
symbol:AT1G74580 "AT1G74580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011765 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 IPI:IPI00523389 PIR:H96774 RefSeq:NP_177597.1
UniGene:At.52514 ProteinModelPortal:Q9CA58 SMR:Q9CA58 PaxDb:Q9CA58
PRIDE:Q9CA58 EnsemblPlants:AT1G74580.1 GeneID:843798
KEGG:ath:AT1G74580 GeneFarm:4799 TAIR:At1g74580 eggNOG:NOG328959
HOGENOM:HOG000006341 InParanoid:Q9CA58 OMA:VFERMDF PhylomeDB:Q9CA58
ProtClustDB:CLSN2682259 Genevestigator:Q9CA58 Uniprot:Q9CA58
Length = 763
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 62/289 (21%), Positives = 105/289 (36%)
Query: 49 SLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXX 108
+L+ L + K A + + +EGL PD+ T L+ Y G V A+
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 109 XXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPEV--YSRAISCFGKQGQLE 166
+D G N +++ ++ + + P V Y+ I QG +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG--IKPNVILYNTLIKGLSNQGMIL 408
Query: 167 LMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVS 226
EM +G + T N + + G +++ + + + D +
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 227 FTYLKERKFFMLGEFLRDVGLGRK-DXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGF 285
Y + K E L DV L D K + + + M E G
Sbjct: 469 HGYSTQLKMENALEIL-DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 286 HPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAY 334
P+L TFNI + R + LE MK++SV PD VT+G ++D +
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
>TAIR|locus:2081041 [details] [associations]
symbol:PPR2 "pentatricopeptide repeat 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0048868 "pollen tube development" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0019843 "rRNA binding" evidence=IDA] InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555
GO:GO:0009790 PROSITE:PS51375 EMBL:AC011623 GO:GO:0009553
GO:GO:0019843 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0048868 Pfam:PF13041 EMBL:AY099616 EMBL:BT006618
IPI:IPI00541784 RefSeq:NP_187294.1 UniGene:At.40524
ProteinModelPortal:Q9SQU6 SMR:Q9SQU6 IntAct:Q9SQU6 PaxDb:Q9SQU6
PRIDE:Q9SQU6 EnsemblPlants:AT3G06430.1 GeneID:819817
KEGG:ath:AT3G06430 TAIR:At3g06430 eggNOG:NOG263130
HOGENOM:HOG000239665 InParanoid:Q9SQU6 OMA:KAGEFPG PhylomeDB:Q9SQU6
ProtClustDB:CLSN2684658 Genevestigator:Q9SQU6 Uniprot:Q9SQU6
Length = 486
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 69/335 (20%), Positives = 131/335 (39%)
Query: 13 KFKRFNVPSHQTHPKNGDLARKIIRYRKQEGFVDCAS-LVEDLGRKKKPHLAHQLVNTVK 71
+F P +Q ++ +K+ R K G+V+ + + DL KK+ A ++ + ++
Sbjct: 56 EFPGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLR 115
Query: 72 SEGLL-PDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCF 130
+ P T L++ +G AQ + AY R
Sbjct: 116 EQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLI 175
Query: 131 NEIISIIDQVSCRNADLLPEV--YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGN 188
++ SI+D++ P+V YS + Q +L+++ KEM R + ++ T N
Sbjct: 176 DDAFSILDKMKSF-PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQN 234
Query: 189 AFIIYYSRFGSLTEMETAYGRLKRSRHLI-DKEGIRAVSFTYLKERKFFMLG---EFLRD 244
+ Y R G +ME + S D + + + K M+ E R+
Sbjct: 235 IVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRN 294
Query: 245 VGLGRKDXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSM 304
G+ + KM S+ E+MR E F +T+N AF+ +
Sbjct: 295 FGIEPETRTFNILIGSYGKKRMYDKMSSVM-EYMRKLE--FPWTTSTYNNIIEAFADVGD 351
Query: 305 FWDLHLSLEHMKHESVGPDLVTYGCVVDAYLDKRL 339
++ L+ + M+ E + D T+ C+++ Y + L
Sbjct: 352 AKNMELTFDQMRSEGMKADTKTFCCLINGYANAGL 386
>TAIR|locus:2077061 [details] [associations]
symbol:AT3G22470 "AT3G22470" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AP000731
HOGENOM:HOG000015176 Pfam:PF12854 Pfam:PF13041 EMBL:BT010576
EMBL:AK175328 IPI:IPI00528419 RefSeq:NP_188886.1 UniGene:At.64127
ProteinModelPortal:Q6NQ83 SMR:Q6NQ83 PaxDb:Q6NQ83 PRIDE:Q6NQ83
EnsemblPlants:AT3G22470.1 GeneID:821818 KEGG:ath:AT3G22470
TAIR:At3g22470 eggNOG:NOG302308 InParanoid:Q6NQ83 OMA:LINSYCK
PhylomeDB:Q6NQ83 ProtClustDB:CLSN2682250 Genevestigator:Q6NQ83
Uniprot:Q6NQ83
Length = 619
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 64/326 (19%), Positives = 124/326 (38%)
Query: 31 LARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALM--LC 88
L +++ +++ V ++L+ L K + A L++ + G PD T ++ LC
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 89 YANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRN--AD 146
+ N + A +D+ + G F++ +S+ +++ + AD
Sbjct: 222 KSGNSAL--ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 147 LLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETA 206
++ YS I G+ + L+EM+ R D T +A I + + G L E +
Sbjct: 280 VV--TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 207 YGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRK-DXXXXXXXXXXXSYA 265
Y + D ++ + KE + D+ + + + SY
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSILINSYC 396
Query: 266 GNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLV 325
++ R F +S G P+ T+N + F + + M V P +V
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 326 TYGCVVDAYLDK-RLGRNLDFGLSKM 350
TYG ++D D L + L+ KM
Sbjct: 457 TYGILLDGLCDNGELNKALEI-FEKM 481
>TAIR|locus:2060226 [details] [associations]
symbol:AT2G32630 "AT2G32630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC004681 Pfam:PF12854
Pfam:PF13041 IPI:IPI00529587 PIR:T02562 RefSeq:NP_180822.1
UniGene:At.66292 ProteinModelPortal:Q8S8P6 SMR:Q8S8P6 PaxDb:Q8S8P6
PRIDE:Q8S8P6 EnsemblPlants:AT2G32630.1 GeneID:817823
KEGG:ath:AT2G32630 GeneFarm:4943 TAIR:At2g32630 eggNOG:NOG268719
HOGENOM:HOG000242512 InParanoid:Q8S8P6 OMA:LIHGECI PhylomeDB:Q8S8P6
ProtClustDB:CLSN2683405 Genevestigator:Q8S8P6 Uniprot:Q8S8P6
Length = 624
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 63/330 (19%), Positives = 121/330 (36%)
Query: 66 LVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYG 125
++ +K +G++ + T LM NG + +A+ +
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340
Query: 126 RIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSA 185
R G + D+++ + Y I K G++ E + EM S+G ++
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 186 TGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDV 245
N I Y R G + E Y +++ D ++ + + +++ ++L +
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 246 GLGRKDXXXXXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMF 305
G Y ++ +R F+ MS G P+ T+N+ A+ +
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 306 WDLHLSLEHMKHESVGPDLVTY-----G-CVVDAYLDKRLGRNLDFGLSKMNLDDSPVVS 359
+ +M+ + PD TY G C+ D +D+ + + GL LD + V
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADN-VDEAMRLFSEMGLK--GLDQNSVTY 577
Query: 360 TDPYVFEAFGKGDFHSSSEAF-LEFKRQRK 388
T + K S EAF L + +RK
Sbjct: 578 T--VMISGLSKAG--KSDEAFGLYDEMKRK 603
>TAIR|locus:2044430 [details] [associations]
symbol:AT2G18940 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 EMBL:AC003673 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AY056798 EMBL:BT010749
IPI:IPI00529187 PIR:T01622 RefSeq:NP_179484.1 UniGene:At.26294
ProteinModelPortal:O64624 SMR:O64624 PaxDb:O64624 PRIDE:O64624
EnsemblPlants:AT2G18940.1 GeneID:816411 KEGG:ath:AT2G18940
TAIR:At2g18940 eggNOG:NOG250401 HOGENOM:HOG000241317
InParanoid:O64624 OMA:CYAKGGN PhylomeDB:O64624
ProtClustDB:CLSN2683067 Genevestigator:O64624 Uniprot:O64624
Length = 822
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 62/321 (19%), Positives = 119/321 (37%)
Query: 54 LGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXX 113
+GR + L +++ ++S+GL D T ++ A G + EA+
Sbjct: 258 MGRSWRKILG--VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG 315
Query: 114 XXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLELMENTLK 173
+ +G+ G + E +S++ ++ + Y+ ++ + + G + ++
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 174 EMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLIDKEGIRAV-SFTYLKE 232
M +G ++ T I Y + G E + +K + + + AV S K
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 233 RKFFMLGEFLRDVGLGRKDXXXXXXXXXXXSYAGNFKM-KSLQREFMRMSEAGFHPDLTT 291
R M+ + L D+ + GN M K + R F M GF PD T
Sbjct: 436 RSNEMI-KMLCDMK-SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 292 FNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMN 351
FN A+ R D M + TY +++A K R+ + +S M
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 352 LDD-SPVVSTDPYVFEAFGKG 371
P ++ + + + KG
Sbjct: 554 SKGFKPTETSYSLMLQCYAKG 574
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 42/189 (22%), Positives = 73/189 (38%)
Query: 150 EVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGR 209
+ ++ IS +G+ G EM GF+ T NA + +R G E
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 210 LKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXXXXXXXXXSYAGNFK 269
+K + + Y K + + + G+ NFK
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ---IFPSWMLLRTLLLANFK 608
Query: 270 MKSL---QREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVT 326
++L +R F + G+ PD+ FN F+R +M+ LE ++ + + PDLVT
Sbjct: 609 CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 327 YGCVVDAYL 335
Y ++D Y+
Sbjct: 669 YNSLMDMYV 677
>TAIR|locus:2027212 [details] [associations]
symbol:AT1G74750 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008263 Pfam:PF01535 TIGRFAMs:TIGR00756 SMART:SM00463
PROSITE:PS50828 Pfam:PF12854 Pfam:PF13041 IPI:IPI00523343
PIR:G96776 RefSeq:NP_177613.1 UniGene:At.52517
ProteinModelPortal:Q9SSF9 SMR:Q9SSF9 STRING:Q9SSF9 PaxDb:Q9SSF9
EnsemblPlants:AT1G74750.1 GeneID:843814 KEGG:ath:AT1G74750
GeneFarm:4802 TAIR:At1g74750 eggNOG:NOG323562 HOGENOM:HOG000244210
InParanoid:Q9SSF9 OMA:SKRGLMD PhylomeDB:Q9SSF9
ProtClustDB:CLSN2682280 Genevestigator:Q9SSF9 Uniprot:Q9SSF9
Length = 855
Score = 129 (50.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 76/320 (23%), Positives = 126/320 (39%)
Query: 40 KQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQ 99
K +G ++V +LGR K+ ++L++ + +G P+ T L+ Y ++ EA
Sbjct: 356 KHDGHT-YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAM 414
Query: 100 XXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPEV--YSRAIS 157
+D + + G + + + ++ + A L P+ YS I+
Sbjct: 415 NVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM--QEAGLSPDTFTYSVIIN 472
Query: 158 CFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSRHLI 217
C GK G L EMV +G + + T N I +++ ETA LK R +
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK---ARNYETA---LKLYRDM- 525
Query: 218 DKEGIRAVSFTYLKERKFFMLGE--FLRDV-G----LGRK----DXXXXXXXXXXXSYAG 266
G + TY + +LG FL + G + RK D AG
Sbjct: 526 QNAGFQPDKVTYSIVME--VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 267 NFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVT 326
N K+ Q + M +AG P++ T N F R+ + + L+ M + P L T
Sbjct: 584 NVD-KAWQW-YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQT 641
Query: 327 YGCVVDAYLDKRLGRNLDFG 346
Y ++ D R N D G
Sbjct: 642 YTLLLSCCTDAR--SNFDMG 659
>TAIR|locus:2150024 [details] [associations]
symbol:AT5G01110 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AL137189 eggNOG:NOG320495 Pfam:PF12854 Pfam:PF13041
EMBL:BT005783 EMBL:AK228473 IPI:IPI00547252 PIR:T45951
RefSeq:NP_195731.1 UniGene:At.33961 ProteinModelPortal:Q9LFC5
SMR:Q9LFC5 PaxDb:Q9LFC5 PRIDE:Q9LFC5 EnsemblPlants:AT5G01110.1
GeneID:831824 KEGG:ath:AT5G01110 TAIR:At5g01110
HOGENOM:HOG000115640 InParanoid:Q9LFC5 OMA:DLLIRTY PhylomeDB:Q9LFC5
ProtClustDB:CLSN2687095 Genevestigator:Q9LFC5 Uniprot:Q9LFC5
Length = 729
Score = 94 (38.1 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 29/145 (20%), Positives = 63/145 (43%)
Query: 49 SLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXXXX 108
+++ L + K A ++ + GL PD++T +L++ G V+E +
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 109 XXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPE--VYSRAISCFGKQGQLE 166
M + R G ++ + + V + A L+P+ +Y+ I + ++G +
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV--KEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 167 LMENTLKEMVSRGFSVDSATGNAFI 191
+ N EM+ +G ++D T N +
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTIL 452
Score = 80 (33.2 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 278 MRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVDAYLDK 337
M + G PD+ T+N F R + + + L M V PD TY C+++ ++ +
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
>TAIR|locus:2015218 [details] [associations]
symbol:AT1G63070 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC010795 eggNOG:NOG320495
HOGENOM:HOG000015176 Pfam:PF12854 Pfam:PF13041 EMBL:DQ446390
IPI:IPI00533927 IPI:IPI00896804 PIR:A96656 RefSeq:NP_176495.1
UniGene:At.52333 ProteinModelPortal:Q9CAN6 SMR:Q9CAN6 ProMEX:Q9CAN6
EnsemblPlants:AT1G63070.1 GeneID:842610 KEGG:ath:AT1G63070
GeneFarm:4780 TAIR:At1g63070 InParanoid:Q9CAN6 OMA:WITKINT
PhylomeDB:Q9CAN6 Genevestigator:Q9CAN6 Uniprot:Q9CAN6
Length = 590
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 76/382 (19%), Positives = 138/382 (36%)
Query: 31 LARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYA 90
L +++ Q V +LV L + K A LV + +G PD T A++
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 91 NNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPE 150
G A +D + ++ + +++ + + P+
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG--IKPD 284
Query: 151 V--YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYG 208
V Y+ ISC G+ L +M+ + + D NA I + + G L E E Y
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 209 RLKRSRHLI-DKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXXXXXXXXXSYAGN 267
+ +S+H D + + K ++ E R+ + ++ + G
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE--MSQRGLVGNTVTYTTLIH-GF 401
Query: 268 FKMK---SLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDL 324
F+ + + Q F +M G HPD+ T+NI + E+M+ + D+
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 325 VTYGCVVDAYLDK-RLGRNLDFGLSKMNLDDSPVVSTDPYVFEAFGKGDFHSSSEA-FLE 382
VTY +++A ++ D S P V T + F + ++A F+E
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 383 FKRQ----RKWTYRKLIAVYLK 400
K TY LI L+
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLR 543
>TAIR|locus:2015228 [details] [associations]
symbol:AT1G63080 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 TIGRFAMs:TIGR00756
EMBL:AC010795 UniGene:At.64076 eggNOG:NOG320495
HOGENOM:HOG000015176 ProtClustDB:CLSN2682329 Pfam:PF12854
Pfam:PF13041 EMBL:AK226724 IPI:IPI00532406 PIR:B96656
RefSeq:NP_176496.1 ProteinModelPortal:Q9CAN5 SMR:Q9CAN5
PRIDE:Q9CAN5 EnsemblPlants:AT1G63080.1 GeneID:842611
KEGG:ath:AT1G63080 GeneFarm:4781 TAIR:At1g63080 InParanoid:Q9CAN5
OMA:DTICYSA PhylomeDB:Q9CAN5 Genevestigator:Q9CAN5 Uniprot:Q9CAN5
Length = 614
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 75/371 (20%), Positives = 143/371 (38%)
Query: 30 DLARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCY 89
+L K+ + + + V +++++ L + + A L + ++G+ PD T +L+ C
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 90 ANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLP 149
N G +A +DA+ + G E + D++ R+ D
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 150 EVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGR 209
Y+ I+ F +L+ + MVS+ D T N I + + + + +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 210 LKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXXXXXXXXXSY----- 264
+ R R L+ V++T L FF + + + K +Y
Sbjct: 406 MSR-RGLVGN----TVTYTTLIHG-FFQASD-CDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 265 --AGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMF---WDLHLSLEHMKHES 319
N K++ F + ++ PD+ T+NI + + WDL SL +K
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS-LK--G 515
Query: 320 VGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDSPVVSTDPY--VFEAFGK-GDFHSS 376
V PD++ Y ++ + K L KM +D P+ + Y + A + GD +S
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK-EDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 377 SEAFLEFKRQR 387
+E E + R
Sbjct: 575 AELIKEMRSCR 585
>TAIR|locus:2181286 [details] [associations]
symbol:EMB976 "AT5G27270" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 EMBL:AF007271
PROSITE:PS51375 EMBL:AC007123 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00531767 PIR:T01796 RefSeq:NP_198079.1
UniGene:At.30814 ProteinModelPortal:O04647 SMR:O04647 STRING:O04647
PaxDb:O04647 PRIDE:O04647 EnsemblPlants:AT5G27270.1 GeneID:832785
KEGG:ath:AT5G27270 TAIR:At5g27270 eggNOG:NOG243118
HOGENOM:HOG000084168 InParanoid:O04647 OMA:YARWGRH PhylomeDB:O04647
ProtClustDB:CLSN2686974 Genevestigator:O04647 Uniprot:O04647
Length = 1038
Score = 131 (51.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 57/245 (23%), Positives = 106/245 (43%)
Query: 151 VYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRL 210
VY+ + +G+ G++++ E T EM+ G D+ + Y+R+G + M T Y +
Sbjct: 190 VYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAV 249
Query: 211 KRSRHLIDKEGIRAVSFTYLKERKFF--MLGEFLRDVGLGRKDXXXXXXXXXXXSYAGN- 267
+ R L+ + + L+++ F ++ +L V G SYA
Sbjct: 250 QERRILLSTS-VYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVS-SYAKQG 307
Query: 268 FKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSL-EHMKHESVGPDLVT 326
FK ++L + F M GF P+ T++ ++ S + W+ + L E M+ + + P T
Sbjct: 308 FKEEAL-KAFGEMKSLGFVPEEVTYS-SVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYT 365
Query: 327 YGCVVDAYLD-----KRLGRNLDFGLSKMNLDDSPVVSTDPYVFEAFGK-GDFHSSSEAF 380
++ Y K L D +K+ D+ V+ + +GK G FH + F
Sbjct: 366 CATMLSLYYKTENYPKALSLFADMERNKIPADE--VIRG--LIIRIYGKLGLFHDAQSMF 421
Query: 381 LEFKR 385
E +R
Sbjct: 422 EETER 426
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 25 HPKNGDLARKIIRYRKQ 41
HP + D AR+II+ + Q
Sbjct: 63 HPLSDDDARRIIKKKAQ 79
>TAIR|locus:2061310 [details] [associations]
symbol:GUN1 "AT2G31400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0031930 "mitochondria-nucleus
signaling pathway" evidence=IMP] [GO:0010019 "chloroplast-nucleus
signaling pathway" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0031930
Gene3D:1.25.40.10 EMBL:AC007169 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 SMART:SM00463 PROSITE:PS50828
GO:GO:0010019 Pfam:PF13041 EMBL:BX819946 IPI:IPI00538422 PIR:C84720
RefSeq:NP_180698.1 UniGene:At.20815 ProteinModelPortal:Q9SIC9
SMR:Q9SIC9 EnsemblPlants:AT2G31400.1 GeneID:817698
KEGG:ath:AT2G31400 GeneFarm:4937 TAIR:At2g31400 eggNOG:NOG313285
HOGENOM:HOG000030408 InParanoid:Q9SIC9 OMA:FEDASML PhylomeDB:Q9SIC9
ProtClustDB:CLSN2683142 Genevestigator:Q9SIC9 Uniprot:Q9SIC9
Length = 918
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 60/312 (19%), Positives = 118/312 (37%)
Query: 30 DLARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCY 89
+ A K R + ++G + ++++ LGR K +A ++ T + G AL+ Y
Sbjct: 220 EFAVKRERRKNEQGKL-ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAY 278
Query: 90 ANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGC-FNEIISIIDQVSCRNADLL 148
+G EA +DA G+ G F ++ D++ RN +
Sbjct: 279 GRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNG-VQ 336
Query: 149 PE--VYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETA 206
P+ ++ ++ + G E N EM +R D + N + + G +
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 207 YGRLKRSRHLIDKEGIRAVSFTYLKERKFF----MLGEFLRDVGLGRKDXXXXXXXXXXX 262
++ R + + V + K +F + GE +R +G+
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE-MRYLGIALDRVSYNTLLSIYT 455
Query: 263 SYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGP 322
+ + + RE M+ G D+ T+N + + + ++ MK E V P
Sbjct: 456 KVGRSEEALDILRE---MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 323 DLVTYGCVVDAY 334
+L+TY ++D Y
Sbjct: 513 NLLTYSTLIDGY 524
>UNIPROTKB|B8ZZ38 [details] [associations]
symbol:LRPPRC "Leucine-rich PPR motif-containing protein,
mitochondrial" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR002885 GO:GO:0005739
EMBL:AC108476 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC127379 HGNC:HGNC:15714 ChiTaRS:LRPPRC
Pfam:PF12854 IPI:IPI00917844 ProteinModelPortal:B8ZZ38
STRING:B8ZZ38 Ensembl:ENST00000409659 HOGENOM:HOG000089961
HOVERGEN:HBG106972 ArrayExpress:B8ZZ38 Bgee:B8ZZ38 Uniprot:B8ZZ38
Length = 504
Score = 118 (46.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 40/205 (19%), Positives = 85/205 (41%)
Query: 47 CASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXX 106
C SL+ +L +++ AH++ +T++ G + D S AL+ Y N +
Sbjct: 130 CGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKME 189
Query: 107 XXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLE 166
+ +Y +G I+ + ++ + V+S ++ + G +E
Sbjct: 190 EANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDME 249
Query: 167 LMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSR-HLIDKEGIRAV 225
EN L M G T A + Y+ G + ++ ++++S HL+D++ ++ +
Sbjct: 250 NAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQII 309
Query: 226 SFTYLKERKFFMLGEFLRDVGLGRK 250
F++ K + E L V R+
Sbjct: 310 -FSFSKAGYPQYVSEILEKVTCERR 333
Score = 45 (20.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 266 GNFKMKSLQR--EFMR-MSEAGFHPDLTTF 292
G K K++Q E ++ M E G HPD T+
Sbjct: 448 GRRKEKNVQGIIEILKGMQELGVHPDQETY 477
>TAIR|locus:2025442 [details] [associations]
symbol:AT1G01970 "AT1G01970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR PROSITE:PS51375 EMBL:AC020622
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:BT010352
EMBL:AK227853 IPI:IPI00531297 PIR:F86151 RefSeq:NP_171699.1
UniGene:At.42625 ProteinModelPortal:Q9LPC4 SMR:Q9LPC4 IntAct:Q9LPC4
PaxDb:Q9LPC4 PRIDE:Q9LPC4 EnsemblPlants:AT1G01970.1 GeneID:839299
KEGG:ath:AT1G01970 GeneFarm:4821 TAIR:At1g01970 eggNOG:NOG274791
HOGENOM:HOG000070464 InParanoid:Q9LPC4 OMA:AIQFAGI PhylomeDB:Q9LPC4
ProtClustDB:CLSN2679285 Genevestigator:Q9LPC4 Uniprot:Q9LPC4
Length = 409
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 46/200 (23%), Positives = 83/200 (41%)
Query: 152 YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLK 211
Y++ I +GK Q+E E TL M +RGF +D T A + YS+ G E + +K
Sbjct: 168 YTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIK 227
Query: 212 RSRHLIDKEGIRAVSFTYLK----ERKFFMLGEF-LRDVGLGRKDXXXXXXXXXXXSYAG 266
+D ++ Y++ E+ +L E +++ GR+ Y+
Sbjct: 228 LLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGRE-----VYKALLRDYSM 282
Query: 267 NFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVT 326
+ +R F + AG PD+ + A+S + L+ E+M+ +
Sbjct: 283 GGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKC 342
Query: 327 YGCVVDAY-LDKRLGRNLDF 345
V+ AY +++L L F
Sbjct: 343 VALVLAAYEKEEKLNEALGF 362
>UNIPROTKB|C9JCA9 [details] [associations]
symbol:LRPPRC "Leucine-rich PPR motif-containing protein,
mitochondrial" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR002885 GO:GO:0005739
EMBL:AC108476 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC127379 HGNC:HGNC:15714 ChiTaRS:LRPPRC
Pfam:PF12854 HOGENOM:HOG000089961 IPI:IPI00917676
ProteinModelPortal:C9JCA9 STRING:C9JCA9 Ensembl:ENST00000447246
UCSC:uc010faw.1 ArrayExpress:C9JCA9 Bgee:C9JCA9 Uniprot:C9JCA9
Length = 359
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 40/205 (19%), Positives = 85/205 (41%)
Query: 47 CASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYANNGFVLEAQXXXXXXX 106
C SL+ +L +++ AH++ +T++ G + D S AL+ Y N +
Sbjct: 104 CGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKME 163
Query: 107 XXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPEVYSRAISCFGKQGQLE 166
+ +Y +G I+ + ++ + V+S ++ + G +E
Sbjct: 164 EANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDME 223
Query: 167 LMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGRLKRSR-HLIDKEGIRAV 225
EN L M G T A + Y+ G + ++ ++++S HL+D++ ++ +
Sbjct: 224 NAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQII 283
Query: 226 SFTYLKERKFFMLGEFLRDVGLGRK 250
F++ K + E L V R+
Sbjct: 284 -FSFSKAGYPQYVSEILEKVTCERR 307
>TAIR|locus:2122561 [details] [associations]
symbol:EMB2453 "EMBRYO DEFECTIVE 2453" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009793
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161595 EMBL:AL078620
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AY864349
EMBL:BX826642 IPI:IPI00531445 PIR:T09378 RefSeq:NP_195672.1
UniGene:At.50413 ProteinModelPortal:Q9SV96 SMR:Q9SV96 PRIDE:Q9SV96
EnsemblPlants:AT4G39620.1 GeneID:830116 KEGG:ath:AT4G39620
TAIR:At4g39620 eggNOG:NOG239211 HOGENOM:HOG000239491
InParanoid:Q9SV96 OMA:RMAMWLF PhylomeDB:Q9SV96
ProtClustDB:CLSN2685705 ArrayExpress:Q9SV96 Genevestigator:Q9SV96
Uniprot:Q9SV96
Length = 563
Score = 122 (48.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 45/249 (18%), Positives = 94/249 (37%)
Query: 77 PDNSTLCALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISI 136
P+ T L+ +A +G V + MDAYG+ G E+ ++
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 137 IDQVSCRNADLLPEV--YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYY 194
+ ++ R+ + P++ ++ I +GK+ + E ME T K ++ T N+ II Y
Sbjct: 266 LTRM--RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 195 SRFGSLTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXX 254
+ + + E + ++ ++ + Y E +VG +
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKA 383
Query: 255 XXXXXXXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEH 314
Y N + F S HPD +T+ A+++ M + + ++
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 315 MKHESVGPD 323
M+ + + P+
Sbjct: 444 MEKDGIVPN 452
Score = 122 (48.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 58/276 (21%), Positives = 108/276 (39%)
Query: 151 VYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTE-METAYGR 209
VYS+ IS GK+GQ + EM + G D++ NA I + + +E G
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 210 LKRSRHLIDKEGIRAVSFTYLKERKFFMLGE------FLRDVGLGRKDXXXXXXXXXXXS 263
L + + I++ V++ L R F G+ +D+ + +
Sbjct: 195 LDKMKG-IERCQPNVVTYNILL-RAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDA 252
Query: 264 YAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPD 323
Y N +K ++ RM PD+ TFN+ ++ + F + + + + P
Sbjct: 253 YGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPT 312
Query: 324 LVTYGCVVDAYLDKRLGRNLDFGLSKMN-LDDSPVVSTDPYVFEAFGK-GDFHSSSEAFL 381
L T+ ++ Y R+ ++ KMN ++ P T + +G G + E F
Sbjct: 313 LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Query: 382 EFKRQ----RKWTYRKLIAVYLKKQL--RRNQIFWN 411
E + T ++ VY + L +++F N
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHN 408
Score = 41 (19.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 31 LARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTV-KSEGLLPDNSTLCALMLCY 89
L + + +Y K C L E+LG+ K ++ + K +PDN L+
Sbjct: 84 LVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVM 143
Query: 90 ANNG 93
G
Sbjct: 144 GKKG 147
>TAIR|locus:2077637 [details] [associations]
symbol:AT3G06920 "AT3G06920" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC016827 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
IPI:IPI00544113 RefSeq:NP_187348.1 UniGene:At.53208
ProteinModelPortal:Q9M907 SMR:Q9M907 PaxDb:Q9M907 PRIDE:Q9M907
EnsemblPlants:AT3G06920.1 GeneID:819877 KEGG:ath:AT3G06920
TAIR:At3g06920 eggNOG:NOG283339 HOGENOM:HOG000242227
InParanoid:Q9M907 OMA:TPNVYTW PhylomeDB:Q9M907
ProtClustDB:CLSN2684804 Genevestigator:Q9M907 Uniprot:Q9M907
Length = 871
Score = 94 (38.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 36/161 (22%), Positives = 71/161 (44%)
Query: 51 VEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALM--LCYANNGFVLEAQXXXXXXXXX 108
++ G+ K +A + + +++ GL PD T +++ LC AN + EA
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR--LDEAVEMFEHLEKN 302
Query: 109 XXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPEV--YSRAISCFGKQGQLE 166
+ YG G F+E S++++ + + +P V Y+ ++C K G+++
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS--IPSVIAYNCILTCLRKMGKVD 360
Query: 167 LMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAY 207
+EM + + + +T N I R G L +TA+
Sbjct: 361 EALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL---DTAF 397
Score = 75 (31.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 28/96 (29%), Positives = 41/96 (42%)
Query: 277 FMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHESVGPDLVTYGCVVD--AY 334
F M E G D +NI F + + LE MK + P +VTYG V+D A
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 335 LDKRLGRNLDFGLSKMNLDDSPVVSTDPYVFEAFGK 370
+D+ + F +K + VV + + FGK
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLI-DGFGK 669
>TAIR|locus:2124137 [details] [associations]
symbol:DOT4 "DEFECTIVELY ORGANIZED TRIBUTARIES 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0010087 "phloem or xylem histogenesis"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010588 "cotyledon vascular tissue pattern
formation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0010087 GO:GO:0048366
GO:GO:0010305 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL035526
GO:GO:0010588 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK221529
IPI:IPI00547122 PIR:T04867 RefSeq:NP_193610.1 UniGene:At.54400
ProteinModelPortal:Q9SN39 SMR:Q9SN39 PaxDb:Q9SN39 PRIDE:Q9SN39
EnsemblPlants:AT4G18750.1 GeneID:827609 KEGG:ath:AT4G18750
GeneFarm:3432 TAIR:At4g18750 eggNOG:NOG288811 InParanoid:Q9SN39
OMA:EGWRFFN PhylomeDB:Q9SN39 ProtClustDB:CLSN2685451
Genevestigator:Q9SN39 Uniprot:Q9SN39
Length = 871
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 64/314 (20%), Positives = 118/314 (37%)
Query: 25 HPKNGDL--ARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTL 82
+ K GDL A+ + R V S++ R+ A +L ++ EG+ PD T+
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 83 CALMLCYANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSC 142
A++ C A + E + MD Y + G E + ++
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 143 RNA---DLLPEVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGS 199
++ + + YS+ +C+ + L L L+E + FS D T + + +
Sbjct: 461 KDIISWNTIIGGYSK--NCYANEA-LSLFNLLLEE---KRFSPDERTVACVLPACASLSA 514
Query: 200 LTEMETAYGRLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXXXXXX 259
+ +G + R+ + D+ ++ Y K +L L D + KD
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL-LLAHMLFD-DIASKDLVSWTVMI 572
Query: 260 XXXSYAGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLEHMKHE- 318
G F +++ F +M +AG D +F A S + + M+HE
Sbjct: 573 AGYGMHG-FGKEAIAL-FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 319 SVGPDLVTYGCVVD 332
+ P + Y C+VD
Sbjct: 631 KIEPTVEHYACIVD 644
>TAIR|locus:2827701 [details] [associations]
symbol:AT2G17140 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 Pfam:PF13041 EMBL:AK228914 IPI:IPI00548717 PIR:E84548
RefSeq:NP_179305.2 UniGene:At.40187 ProteinModelPortal:Q0WPZ6
SMR:Q0WPZ6 PRIDE:Q0WPZ6 EnsemblPlants:AT2G17140.1 GeneID:816219
KEGG:ath:AT2G17140 TAIR:At2g17140 eggNOG:NOG267932
HOGENOM:HOG000238764 InParanoid:Q0WPZ6 OMA:ILVRGYC PhylomeDB:Q0WPZ6
ProtClustDB:CLSN2692420 Genevestigator:Q0WPZ6 Uniprot:Q0WPZ6
Length = 874
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 49/201 (24%), Positives = 87/201 (43%)
Query: 147 LLPE--VYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEME 204
+LP +Y+ +S F ++G+ + E +++M G D T N+ I + G + +
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 205 TAYGRLKRSRHLIDKEGI-RAVSFTY-LKERKFFMLGEFLRDVGLGRKDXXXXXXXXXXX 262
+ ++ +L G+ R S TY L + F +G L D +
Sbjct: 273 RIFSDMELDEYL----GLPRPNSITYNLMLKGFCKVG-LLEDAKTLFESIRENDDLASLQ 327
Query: 263 SYAGNFKMKSLQR--EFM-------RMSEAGFHPDLTTFNIRAVAFSRMSMFWDLHLSLE 313
SY N ++ L R +F+ +M++ G P + ++NI ++ M D +
Sbjct: 328 SY--NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 314 HMKHESVGPDLVTYGCVVDAY 334
MK V PD VTYGC++ Y
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGY 406
>TAIR|locus:2015208 [details] [associations]
symbol:AT1G63130 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC010795 eggNOG:NOG320495
HOGENOM:HOG000015176 ProtClustDB:CLSN2682329 Pfam:PF12854
Pfam:PF13041 EMBL:AY128387 EMBL:BT000125 IPI:IPI00517647 PIR:G96656
RefSeq:NP_176501.1 UniGene:At.36174 ProteinModelPortal:Q9CAN0
SMR:Q9CAN0 IntAct:Q9CAN0 PaxDb:Q9CAN0 PRIDE:Q9CAN0
EnsemblPlants:AT1G63130.1 GeneID:842617 KEGG:ath:AT1G63130
GeneFarm:4782 TAIR:At1g63130 InParanoid:Q9CAN0 OMA:ARECDNA
PhylomeDB:Q9CAN0 Genevestigator:Q9CAN0 Uniprot:Q9CAN0
Length = 630
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 77/372 (20%), Positives = 150/372 (40%)
Query: 31 LARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCYA 90
L +K+ + + + G V ++++ L K + A L + ++G+ P+ T +L+ C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 91 NNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLPE 150
N G +A +DA+ + G E + D++ R+ D P+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PD 360
Query: 151 V--YSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYG 208
+ YS I+ F +L+ ++ + M+S+ + T N I + + + E +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 209 RLKRSRHLIDKEGIRAVSFTYLKERKFFMLGEFLRDVGLGRKDXXXXXXXXXXXSYA--- 265
+ + R L+ V++T L FF E + + K +Y+
Sbjct: 421 EMSQ-RGLVGN----TVTYTTLIHG-FFQARE-CDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 266 ----GNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMF---WDLHLSLEHMKHE 318
N K+++ F + + PD+ T+NI + WDL SL +K
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LK-- 530
Query: 319 SVGPDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDSPVVSTDPY--VFEAFGK-GDFHS 375
V P++VTY ++ + K L D +M ++ P+ + Y + A + GD +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMK-EEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 376 SSEAFLEFKRQR 387
S+E E + R
Sbjct: 590 SAELIREMRSCR 601
>TAIR|locus:2026192 [details] [associations]
symbol:RPF2 "rna processing factor 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0000966 "RNA 5'-end processing" evidence=IMP]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0003723 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007190 TIGRFAMs:TIGR00756 EMBL:AC005698 GO:GO:0000966
eggNOG:NOG320495 HOGENOM:HOG000015176 ProtClustDB:CLSN2682329
Pfam:PF12854 Pfam:PF13041 IPI:IPI00518837 RefSeq:NP_176454.1
UniGene:At.65045 ProteinModelPortal:Q9SXD1 SMR:Q9SXD1 STRING:Q9SXD1
PaxDb:Q9SXD1 PRIDE:Q9SXD1 EnsemblPlants:AT1G62670.1 GeneID:842564
KEGG:ath:AT1G62670 GeneFarm:4355 TAIR:At1g62670 InParanoid:Q9SXD1
OMA:ADEMMER PhylomeDB:Q9SXD1 ArrayExpress:Q9SXD1
Genevestigator:Q9SXD1 Uniprot:Q9SXD1
Length = 630
Score = 117 (46.2 bits), Expect = 0.00092, P = 0.00092
Identities = 71/366 (19%), Positives = 139/366 (37%)
Query: 30 DLARKIIRYRKQEGFVDCASLVEDLGRKKKPHLAHQLVNTVKSEGLLPDNSTLCALMLCY 89
+L K+ + + + G + ++++ L + K A L ++++G+ P+ T +L+ C
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 90 ANNGFVLEAQXXXXXXXXXXXXXXXXXXXXXMDAYGRIGCFNEIISIIDQVSCRNADLLP 149
N G +A +DA+ + G E + D++ R+ D
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 150 EVYSRAISCFGKQGQLELMENTLKEMVSRGFSVDSATGNAFIIYYSRFGSLTEMETAYGR 209
YS I+ F +L+ + + MVS+ D T N I + ++ + E +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 210 LKRSRHLIDKEGIRAVSFTYLKERKFF-----MLGEFLRDVGLGRKDXXXXXXXXXXXSY 264
+ + R L+ V++ L + F M E +++
Sbjct: 422 MSQ-RGLVGN----TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 265 AGNFKMKSLQREFMRMSEAGFHPDLTTFNIRAVAFSRMSMF---WDLHLSLEHMKHESVG 321
N K++ F + + P + T+NI + WDL +L +K V
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS-LK--GVK 533
Query: 322 PDLVTYGCVVDAYLDKRLGRNLDFGLSKMNLDDSPVVSTDPY--VFEA-FGKGDFHSSSE 378
PD+V Y ++ + K D L K +D + ++ Y + A GD +S+E
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEAD-ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 379 AFLEFK 384
E +
Sbjct: 593 LIKEMR 598
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 412 380 0.00090 117 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 612 (65 KB)
Total size of DFA: 239 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.26u 0.14s 29.40t Elapsed: 00:00:02
Total cpu time: 29.27u 0.14s 29.41t Elapsed: 00:00:02
Start: Sat May 11 02:08:22 2013 End: Sat May 11 02:08:24 2013