Query 040581
Match_columns 394
No_of_seqs 165 out of 1194
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 15:42:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040581.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040581hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 6.5E-68 2.2E-72 523.1 31.0 364 20-388 4-413 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.2E-62 7.5E-67 483.5 32.0 357 21-388 5-401 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 4.6E-59 1.6E-63 456.5 29.2 345 24-384 2-381 (381)
4 1dpj_A Proteinase A; proteinas 100.0 1.4E-54 5E-59 416.6 24.7 305 25-375 3-327 (329)
5 1j71_A Candidapepsin, aspartic 100.0 1.2E-54 4E-59 418.1 24.0 305 24-375 2-322 (334)
6 2apr_A Rhizopuspepsin; hydrola 100.0 2.1E-54 7.2E-59 414.7 25.3 303 28-376 7-323 (325)
7 3psg_A Pepsinogen; hydrolase(a 100.0 4.6E-55 1.6E-59 425.9 20.6 309 23-375 44-368 (370)
8 2x0b_A Renin; hydrolase-hormon 100.0 5.5E-55 1.9E-59 426.5 20.6 310 24-375 50-381 (383)
9 1tzs_A Cathepsin E; hydrolase, 100.0 2.6E-54 8.9E-59 418.4 25.0 310 23-375 11-340 (351)
10 3cms_A Chymosin B; hydrolase, 100.0 1.1E-54 3.8E-59 416.4 22.1 307 23-375 2-321 (323)
11 1mpp_A Pepsin; hydrolase(acid 100.0 3.8E-54 1.3E-58 418.9 25.6 320 21-384 4-359 (361)
12 2qzx_A Candidapepsin-5; aspart 100.0 2.1E-54 7.4E-59 417.6 23.5 311 24-382 2-333 (342)
13 1am5_A Pepsin, acid proteinase 100.0 4.1E-54 1.4E-58 412.6 24.5 305 25-375 2-322 (324)
14 4aa9_A Chymosin; hydrolase, as 100.0 2.7E-54 9.3E-59 413.2 18.6 304 27-376 3-319 (320)
15 3fv3_A SAPP1P-secreted asparti 100.0 2.3E-53 7.9E-58 409.9 24.9 305 24-382 2-331 (339)
16 3c9x_A Trichoderma reesei aspa 100.0 1.6E-53 5.6E-58 409.2 22.9 305 27-375 5-328 (329)
17 3k1w_A Renin; protease, altern 100.0 6.1E-54 2.1E-58 414.3 19.8 316 20-377 3-340 (341)
18 1oew_A Endothiapepsin; hydrola 100.0 2.2E-53 7.5E-58 408.3 23.5 300 33-375 12-328 (329)
19 3pvk_A Candidapepsin-2; hydrol 100.0 1.7E-53 5.7E-58 411.4 21.9 311 24-382 2-333 (342)
20 1htr_B Gastricsin; aspartyl pr 100.0 1.4E-53 4.7E-58 409.8 18.5 304 27-375 5-327 (329)
21 1miq_A Plasmepsin; aspartic pr 100.0 1.8E-53 6.3E-58 415.4 16.6 304 24-376 51-373 (375)
22 1yg9_A Aspartic protease BLA G 100.0 8.4E-53 2.9E-57 404.4 17.2 305 23-376 5-328 (330)
23 1wkr_A Polyporopepsin; hydrola 100.0 1.7E-51 5.7E-56 397.1 26.3 293 25-376 3-332 (340)
24 1ibq_A Aspergillopepsin; aspar 100.0 7.8E-52 2.7E-56 396.9 23.6 301 29-375 7-323 (325)
25 3qvc_A Histo-aspartic protease 100.0 2.1E-52 7.1E-57 415.5 18.7 306 23-377 125-449 (451)
26 2bju_A Plasmepsin II; aspartic 100.0 3.8E-52 1.3E-56 413.2 19.6 305 24-376 127-449 (453)
27 1izd_A Aspartic proteinase; su 100.0 1.2E-51 4E-56 395.3 20.1 295 34-375 13-321 (323)
28 1qdm_A Prophytepsin; aspartic 100.0 3.2E-51 1.1E-55 410.3 22.7 325 24-375 41-476 (478)
29 2ewy_A Beta-secretase 2; BACE2 100.0 6.4E-51 2.2E-55 399.2 24.2 316 28-384 6-359 (383)
30 1bxo_A Protein (penicillopepsi 100.0 1.8E-51 6.2E-56 394.0 19.1 301 24-375 6-321 (323)
31 3vf3_A Beta-secretase 1; struc 100.0 1.1E-50 3.6E-55 400.1 23.3 314 34-385 26-379 (402)
32 2qp8_A Beta-secretase 1; BACE1 100.0 2.6E-50 8.9E-55 396.4 24.5 316 28-384 14-371 (395)
33 3lpj_A Beta-secretase 1; alzhe 100.0 2.7E-50 9.3E-55 403.0 23.3 314 35-385 73-425 (455)
34 1b5f_A Protein (cardosin A); h 100.0 6E-40 2.1E-44 300.7 16.1 222 26-272 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 3.1E-36 1E-40 276.5 15.1 217 142-375 3-239 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 1.1E-19 3.7E-24 141.7 9.1 94 25-134 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 1.1E-15 3.8E-20 116.7 6.1 70 304-375 12-85 (87)
38 2i1a_A DNA damage-inducible pr 94.3 0.18 6.2E-06 41.2 8.5 25 350-374 110-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 91.5 0.71 2.4E-05 37.8 7.9 26 349-374 108-133 (148)
40 3s8i_A Protein DDI1 homolog 1; 87.9 0.74 2.5E-05 37.7 5.3 30 34-65 21-50 (148)
41 2i1a_A DNA damage-inducible pr 79.4 1.6 5.3E-05 35.4 3.8 30 34-65 23-52 (148)
42 1fmb_A EIAV protease; hydrolas 78.4 1.8 6.2E-05 33.0 3.6 26 38-65 9-34 (104)
43 2hs1_A HIV-1 protease; ultra-h 77.2 2.2 7.4E-05 32.2 3.6 28 39-68 10-37 (99)
44 3ec0_A Protease; HIV-2, inhibi 69.3 4.1 0.00014 30.7 3.5 28 39-68 10-37 (99)
45 3liy_A Protease; hydrolase, hy 69.2 3.7 0.00013 31.7 3.2 30 39-68 12-44 (116)
46 2hah_A Protease, retropepsin; 64.2 5.4 0.00019 31.0 3.4 27 38-67 15-41 (116)
47 3sqf_A Protease; folded monome 57.3 9.5 0.00033 29.4 3.6 29 38-68 10-38 (114)
48 1lya_A Cathepsin D; lysosomal 52.2 16 0.00055 27.0 4.2 37 217-262 5-44 (97)
49 1fmb_A EIAV protease; hydrolas 49.0 14 0.00049 27.9 3.4 34 226-265 6-39 (104)
50 3c9x_A Trichoderma reesei aspa 48.5 23 0.00078 32.5 5.5 43 23-67 182-230 (329)
51 3slz_A GAG-Pro-POL polyprotein 47.9 18 0.00062 28.7 3.9 32 35-68 20-51 (132)
52 2hs1_A HIV-1 protease; ultra-h 46.8 16 0.00055 27.4 3.3 30 226-261 6-35 (99)
53 3slz_A GAG-Pro-POL polyprotein 43.5 21 0.00072 28.3 3.7 27 230-262 24-50 (132)
54 2apr_A Rhizopuspepsin; hydrola 42.5 24 0.00081 32.3 4.5 43 23-67 182-229 (325)
55 3ec0_A Protease; HIV-2, inhibi 42.1 19 0.00065 27.0 3.1 30 225-260 5-34 (99)
56 1b5f_A Protein (cardosin A); h 42.1 30 0.001 30.0 5.0 39 25-66 180-226 (239)
57 1bxo_A Protein (penicillopepsi 41.5 31 0.0011 31.5 5.2 41 212-262 4-44 (323)
58 2hah_A Protease, retropepsin; 41.4 23 0.00077 27.4 3.5 31 224-261 10-40 (116)
59 3ka2_A [L-Ala51;Gly51']HIV-1 p 41.1 20 0.00069 30.6 3.5 27 38-66 9-35 (203)
60 1ibq_A Aspergillopepsin; aspar 40.2 34 0.0012 31.2 5.3 41 212-262 3-43 (325)
61 2rsp_A RSV protease; hydrolase 39.7 21 0.0007 28.0 3.0 23 44-68 27-49 (124)
62 1lya_B Cathepsin D; lysosomal 39.7 31 0.001 29.8 4.7 32 36-67 99-137 (241)
63 1izd_A Aspartic proteinase; su 38.8 36 0.0012 31.0 5.2 41 212-262 4-44 (323)
64 1oew_A Endothiapepsin; hydrola 38.8 27 0.00092 32.0 4.3 43 23-67 181-229 (329)
65 1mpp_A Pepsin; hydrolase(acid 32.0 53 0.0018 30.3 5.2 43 211-262 4-49 (361)
66 3aup_A SBG7S, BG, basic 7S glo 31.3 52 0.0018 31.0 5.1 44 23-67 216-276 (403)
67 3sqf_A Protease; folded monome 30.1 47 0.0016 25.5 3.6 26 230-261 11-36 (114)
68 1t6e_X Xylanase inhibitor; two 29.4 32 0.0011 32.2 3.2 45 23-67 191-246 (381)
69 1j71_A Candidapepsin, aspartic 28.9 58 0.002 29.7 4.9 37 217-262 5-43 (334)
70 3liy_A Protease; hydrolase, hy 27.9 51 0.0018 25.3 3.4 27 229-261 11-42 (116)
71 2qzx_A Candidapepsin-5; aspart 27.1 65 0.0022 29.4 4.9 37 217-262 5-43 (342)
72 1wkr_A Polyporopepsin; hydrola 26.4 67 0.0023 29.3 4.8 36 217-261 5-42 (340)
73 1qdm_A Prophytepsin; aspartic 26.2 68 0.0023 31.2 4.9 40 25-67 223-270 (478)
74 1tzs_A Cathepsin E; hydrolase, 26.0 58 0.002 30.0 4.3 42 23-67 191-239 (351)
75 3pvk_A Candidapepsin-2; hydrol 25.9 86 0.0029 28.5 5.5 41 24-67 183-229 (342)
76 2x0b_A Renin; hydrolase-hormon 25.4 63 0.0021 30.3 4.4 40 25-67 234-280 (383)
77 3cms_A Chymosin B; hydrolase, 25.1 56 0.0019 29.6 3.9 41 213-262 2-45 (323)
78 3fv3_A SAPP1P-secreted asparti 24.7 52 0.0018 30.0 3.6 37 217-262 5-43 (339)
79 1htr_B Gastricsin; aspartyl pr 24.1 72 0.0025 28.9 4.5 41 25-68 181-229 (329)
80 1yg9_A Aspartic protease BLA G 24.1 64 0.0022 29.4 4.2 30 224-262 17-46 (330)
81 3psg_A Pepsinogen; hydrolase(a 22.7 80 0.0027 29.3 4.6 42 23-67 222-270 (370)
82 1am5_A Pepsin, acid proteinase 22.5 1E+02 0.0035 27.8 5.2 42 23-68 178-226 (324)
83 3ka2_A [L-Ala51;Gly51']HIV-1 p 21.7 70 0.0024 27.3 3.5 28 38-67 113-140 (203)
84 2rsp_A RSV protease; hydrolase 20.8 47 0.0016 25.9 2.0 21 235-261 27-47 (124)
85 3vla_A EDGP; extracellular, in 20.6 1E+02 0.0035 29.2 4.9 43 212-261 6-50 (413)
86 3k1w_A Renin; protease, altern 20.1 73 0.0025 29.0 3.7 32 36-67 199-237 (341)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=6.5e-68 Score=523.05 Aligned_cols=364 Identities=48% Similarity=0.783 Sum_probs=303.0
Q ss_pred cCCCeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCC--
Q 040581 20 ASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVP-- 97 (394)
Q Consensus 20 ~~~~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~-- 97 (394)
.+++++.+||++|..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.++|.++.|..+.+....
T Consensus 4 ~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c---~~Sst~~~v~C~s~~C~~~~~~~~~~c 80 (413)
T 3vla_A 4 FRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---YVSSTYRPVRCRTSQCSLSGSIACGDC 80 (413)
T ss_dssp CCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS---CCCTTCEECBTTSHHHHHTTCCEEECC
T ss_pred CCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC---CCCCCcCccCCCcccccccccCCCccc
Confidence 46889999999999999999999999999999999999999999999986 4899999999999999876531100
Q ss_pred --CCCCCCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCC-C-cceecccEEEecccCccccCCCCCcceeeecCCC
Q 040581 98 --GNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELED-P-SITAVDQFLFSCAPTFLLQGLARGARGMLGLGRA 173 (394)
Q Consensus 98 --~~~~~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~-~-~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~ 173 (394)
..+..|.++.|.|.+.|+.+++.++|++++|+|+|+..++. + ..+.++++.|||++.+..++.+..+|||||||++
T Consensus 81 ~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~ 160 (413)
T 3vla_A 81 FNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRT 160 (413)
T ss_dssp SSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSS
T ss_pred ccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCC
Confidence 00123777789999999437899999999999999854322 1 2357889999999986434455678999999999
Q ss_pred CCchhhhhhcccCCcceEEEeecCC---CCeEEEcCCCC-------CCCC-ceEEecccCC-------------CceEEE
Q 040581 174 PISLPSQLATGIGHQRKFFMCLSSS---NGVVLSHHTST-------TKLP-LMYTPLIGKS-------------QDYFIN 229 (394)
Q Consensus 174 ~~s~~~ql~~~~~i~~~Fs~~L~~~---~G~l~fGg~~~-------~~g~-~~~tpl~~~~-------------~~y~v~ 229 (394)
+.|++.||..++.++++||+||.+. +|+|+|||.+. +.++ +.||||+.++ .+|.|+
T Consensus 161 ~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~ 240 (413)
T 3vla_A 161 RIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240 (413)
T ss_dssp SSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred CcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence 9999999999888889999999984 89999999864 4677 9999998763 589999
Q ss_pred EeEEEEcCEEEEEe---c------CCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCC
Q 040581 230 VKSIKINGNPLSVT---I------EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGF 300 (394)
Q Consensus 230 l~~i~v~~~~~~~~---~------~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 300 (394)
|++|+||++.+.++ + .+++||||||++++||+++|++|+++|.+.... +++++.+....+..|++.+..
T Consensus 241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~--~~~~~~~~~~~~~~C~~~~~~ 318 (413)
T 3vla_A 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAA--RNITRVASVAPFGACFSTDNI 318 (413)
T ss_dssp CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHH--TTCCEECCCTTCSCEEECTTC
T ss_pred EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcc--cCCCcCCCCCCCcceeccCCc
Confidence 99999999998764 1 257999999999999999999999999988752 235554444557899987643
Q ss_pred C----CCCCCeEEEEEcCcceEEEEccCCeEEEeCCceEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe-
Q 040581 301 N----GSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST- 375 (394)
Q Consensus 301 ~----~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~- 375 (394)
. +..+|+|+|+|+|++++|+|++++|+++..++..|++++.......+.||||+.|||++|+|||++++|||||+
T Consensus 319 ~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 319 LSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp CEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 2 13699999999975589999999999987667799998876432235799999999999999999999999999
Q ss_pred --CCCCCCCCCCCCc
Q 040581 376 --LRGTCCSDFSPNS 388 (394)
Q Consensus 376 --~~~~~C~~~~~~~ 388 (394)
.+.+.|++|+|++
T Consensus 399 ~~~~~~~c~~~~~~~ 413 (413)
T 3vla_A 399 LLGSRTTCANFNFTS 413 (413)
T ss_dssp GGGGTCCGGGSBCCC
T ss_pred cccCcccccCcCCCC
Confidence 6789999999864
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.2e-62 Score=483.48 Aligned_cols=357 Identities=36% Similarity=0.618 Sum_probs=286.4
Q ss_pred CC-CeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCC----
Q 040581 21 SV-NSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSP---- 95 (394)
Q Consensus 21 ~~-~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~---- 95 (394)
++ +.+.+||+++..+++|+++|.||||||+++|+|||||+++||+|.+| .+|+||+.++|.++.|..+....
T Consensus 5 ~~~~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~---~~Sst~~~~~C~s~~C~~~~~~~c~~c 81 (403)
T 3aup_A 5 KPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ---YSSKTYQAPFCHSTQCSRANTHQCLSC 81 (403)
T ss_dssp -CCCCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC---CCCSSCBCCCTTBHHHHHTTCCCEEEC
T ss_pred CCCccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC---CCCCCCCccCCCCccccCccccCcccc
Confidence 45 78899999767889999999999999999999999999999999986 48999999999999998765320
Q ss_pred -CCCCCCCCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCC----CcceecccEEEecccCcccc-CCCCCcceeee
Q 040581 96 -VPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELED----PSITAVDQFLFSCAPTFLLQ-GLARGARGMLG 169 (394)
Q Consensus 96 -~~~~~~~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~----~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlG 169 (394)
++. .+.|.++.|.|.+.|++|++.+.|.+++|+|+|++.++. ...++++++.|||++..... +.....+||||
T Consensus 82 ~~~~-~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlG 160 (403)
T 3aup_A 82 PAAS-RPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAG 160 (403)
T ss_dssp SSSC-BTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEE
T ss_pred CCCC-CCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEE
Confidence 111 122777789999999656899999999999999874321 01247889999999986323 44567899999
Q ss_pred cCCCCCchhhhhhcccCCcceEEEeecCC---CCeEEEcCCCC--C--C-C-----CceEEecccCC-CceEEEEeEEEE
Q 040581 170 LGRAPISLPSQLATGIGHQRKFFMCLSSS---NGVVLSHHTST--T--K-L-----PLMYTPLIGKS-QDYFINVKSIKI 235 (394)
Q Consensus 170 Lg~~~~s~~~ql~~~~~i~~~Fs~~L~~~---~G~l~fGg~~~--~--~-g-----~~~~tpl~~~~-~~y~v~l~~i~v 235 (394)
||++..+++.|+++....+++||+||.+. +|.|+||| +. + . | ++.|+|++.++ .+|.|.|++|+|
T Consensus 161 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v 239 (403)
T 3aup_A 161 LGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRI 239 (403)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEE
T ss_pred CCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEEEE
Confidence 99999999999976655579999999984 99999999 43 4 3 4 99999998763 799999999999
Q ss_pred cCEEE-EEe---c------CCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCC
Q 040581 236 NGNPL-SVT---I------EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAV 305 (394)
Q Consensus 236 ~~~~~-~~~---~------~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 305 (394)
+++.+ .++ + ..++||||||++++||+++|++|+++|.+.+.. ++++.....+..|++.... ..+
T Consensus 240 ~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~----~~~~~~~~~~~~c~~c~~~--~~~ 313 (403)
T 3aup_A 240 NQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK----QAQVKSVAPFGLCFNSNKI--NAY 313 (403)
T ss_dssp TTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG----GGEECCCTTCSCEECGGGC--CCC
T ss_pred CCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc----ccccCCCCCCCceEECCCc--CcC
Confidence 99988 543 1 235999999999999999999999999776541 3343333345578876543 368
Q ss_pred CeEEEEEcCc-ceEEEEccCCeEEEeCCceEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEE-Ee---CCCCC
Q 040581 306 PVIDFVLQSE-MVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGF-ST---LRGTC 380 (394)
Q Consensus 306 P~i~f~f~g~-~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGf-a~---~~~~~ 380 (394)
|+|+|+|+|+ +++|+|++++|++...++..|++++.......+.||||+.|||++|+|||++++|||| |+ .++++
T Consensus 314 P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~ 393 (403)
T 3aup_A 314 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVK 393 (403)
T ss_dssp CCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCC
T ss_pred CcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCC
Confidence 9999999982 1699999999999876567899888765422357999999999999999999999999 77 56889
Q ss_pred CCCCCCCc
Q 040581 381 CSDFSPNS 388 (394)
Q Consensus 381 C~~~~~~~ 388 (394)
|++++..+
T Consensus 394 C~~~~~~~ 401 (403)
T 3aup_A 394 CADLFNFA 401 (403)
T ss_dssp GGGSCCTT
T ss_pred cccccccc
Confidence 99988765
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.6e-59 Score=456.47 Aligned_cols=345 Identities=33% Similarity=0.593 Sum_probs=269.1
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCC-
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSD- 102 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~- 102 (394)
.+.+||+++..+++|+++|.|||| |+|||||+++||+|.+| .+|+.++|.++.|..+++...++.+..
T Consensus 2 ~~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~------~~~~~~~C~s~~C~~~~~~~~~sc~~~~ 70 (381)
T 1t6e_X 2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG------QPPAEIPCSSPTCLLANAYPAPGCPAPS 70 (381)
T ss_dssp CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT------CCCCCCBTTSHHHHHHHSSCCTTCCCCC
T ss_pred ceEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC------CCCCccCCCCchhccccCCCCCCCCCcc
Confidence 478999998889999999999998 99999999999999976 357888999999976433212220000
Q ss_pred ----CCCCCc-eeeEEeCCCCceEeeEEEEEEEEecccCCCCcceeccc----EEEecccCccccCCCCCcceeeecCCC
Q 040581 103 ----TTTNTC-GVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQ----FLFSCAPTFLLQGLARGARGMLGLGRA 173 (394)
Q Consensus 103 ----~~~~~~-~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~----~~fg~~~~~~~~~~~~~~~GIlGLg~~ 173 (394)
+.+..| .|.+.|+ +|+.++|.+++|+|+|++.++. ..+++ +.|||++.+...+.....|||||||++
T Consensus 71 ~~~~~~~~~c~~f~i~Yg-dGs~~~G~l~~Dtv~ig~~~g~---~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~ 146 (381)
T 1t6e_X 71 CGSDKHDKPCTAYPYNPV-SGACAAGSLSHTRFVANTTDGS---KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANS 146 (381)
T ss_dssp C------CBCEECCBCTT-TCCBCCEEEEEEEEEEEEESSS---SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSS
T ss_pred CCcCcCCCcccccccccc-CCceeeEEEEEEEEEeeccCCC---ccccceeeeeEeecCcccccCCCCCCCceEEEeCCC
Confidence 123457 5999998 8888899999999999864311 13444 367999876323345678999999999
Q ss_pred CCchhhhhhcccCCcceEEEeecCC-CCeEEEcCCCC----CCCCceEEecccCC--CceEEEEeEEEEcCEEEEEe---
Q 040581 174 PISLPSQLATGIGHQRKFFMCLSSS-NGVVLSHHTST----TKLPLMYTPLIGKS--QDYFINVKSIKINGNPLSVT--- 243 (394)
Q Consensus 174 ~~s~~~ql~~~~~i~~~Fs~~L~~~-~G~l~fGg~~~----~~g~~~~tpl~~~~--~~y~v~l~~i~v~~~~~~~~--- 243 (394)
..+++.||..++.++++||+||.+. +|+|+|||.+. +.+++.|+|++.++ .+|.|.|++|+|+++.+.++
T Consensus 147 ~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~ 226 (381)
T 1t6e_X 147 GLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGA 226 (381)
T ss_dssp TTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTC
T ss_pred cchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHH
Confidence 9999999998876689999999985 99999999864 47999999998753 46779999999999988655
Q ss_pred c-CCceEEeccCceeeechHHHHHHHHHHHHHHHhc---ccCceec-CCCCCCCceecccCCC----CCCCCeEEEEEcC
Q 040581 244 I-EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAA---SRDMSVV-APVAPFSLCFSSKGFN----GSAVPVIDFVLQS 314 (394)
Q Consensus 244 ~-~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~---~~~~~~~-~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g 314 (394)
+ .+++||||||++++||+++|++|+++|.+..... ..++++. +....+..|++.+... ...+|+|+|+|+|
T Consensus 227 ~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g 306 (381)
T 1t6e_X 227 LATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDG 306 (381)
T ss_dssp SCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEETT
T ss_pred ccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEEEECC
Confidence 2 3579999999999999999999999998876410 0023333 2234567899766422 1368999999986
Q ss_pred cceEEEEccCCeEEEeCCceEEEEEEeCCC-----CCCCeeEECccceeeeEEEEeCCCCeEEEEe-CCCCCCCCC
Q 040581 315 EMVKWRFYGSNSMVKVNEEVVCLGFLDGGS-----DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST-LRGTCCSDF 384 (394)
Q Consensus 315 ~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~-----~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~-~~~~~C~~~ 384 (394)
+++|+|++++|++...++..|++++.... ...+.||||+.|||++|+|||++++|||||+ ...+.|++|
T Consensus 307 -g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~~~~cs~~ 381 (381)
T 1t6e_X 307 -GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381 (381)
T ss_dssp -SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTTCCSCC-
T ss_pred -CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccCCCCCCCC
Confidence 49999999999998765679999887643 1135799999999999999999999999999 447889876
No 4
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.4e-54 Score=416.64 Aligned_cols=305 Identities=16% Similarity=0.213 Sum_probs=243.1
Q ss_pred EEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q 040581 25 VAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTT 104 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~ 104 (394)
..+||.+. .+.+|+++|.||||||+++|+|||||+++||+|..| .+..|..+. .+++.+++++.
T Consensus 3 ~~~~l~~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C--------------~~~~C~~~~-~y~~~~SsT~~ 66 (329)
T 1dpj_A 3 HDVPLTNY-LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNEC--------------GSLACFLHS-KYDHEASSSYK 66 (329)
T ss_dssp EEEECEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC--------------CSHHHHTSC-CBCGGGCTTCE
T ss_pred cceeeeec-CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCC--------------CCcccCCcC-cCCcccCcCeE
Confidence 46788873 578999999999999999999999999999999986 223454432 23444444466
Q ss_pred CCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccc-cCCCCCcceeeecCCCCCch------
Q 040581 105 TNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLL-QGLARGARGMLGLGRAPISL------ 177 (394)
Q Consensus 105 ~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~GIlGLg~~~~s~------ 177 (394)
.+.|.|.+.|+ +| +++|.+++|+|+|++. +++++.|||++.... .......+||||||+...++
T Consensus 67 ~~~~~~~i~Yg-~G-s~~G~~~~D~v~ig~~-------~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~ 137 (329)
T 1dpj_A 67 ANGTEFAIQYG-TG-SLEGYISQDTLSIGDL-------TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPP 137 (329)
T ss_dssp EEEEEEEEEET-TE-EEEEEEEEEEEEETTE-------EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCH
T ss_pred ECCcEEEEEEC-Cc-eEEEEEEEEEEEECCe-------EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCH
Confidence 67899999998 66 7999999999999986 788999999987521 11235689999999986553
Q ss_pred hhhhhcccCC-cceEEEeecCC------CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCce
Q 040581 178 PSQLATGIGH-QRKFFMCLSSS------NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLT 248 (394)
Q Consensus 178 ~~ql~~~~~i-~~~Fs~~L~~~------~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~ 248 (394)
..+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+... ...+
T Consensus 138 ~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~-~~~a 215 (329)
T 1dpj_A 138 FYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK-AYWEVKFEGIGLGDEYAELE-SHGA 215 (329)
T ss_dssp HHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB-TTBEEEEEEEEETTEEEECS-SCEE
T ss_pred HHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC-ceEEEEeeeEEECCeEecCC-CccE
Confidence 4577788777 68999999764 79999999874 7899999999865 89999999999999887644 5679
Q ss_pred EEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCC-CceecccCCCCCCCCeEEEEEcCcceEEEEccCCeE
Q 040581 249 KLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPF-SLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSM 327 (394)
Q Consensus 249 iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~ 327 (394)
||||||++++||++++++|++++.+.. .....+ ..|... ..+|+|+|+|+| .+++|||++|+
T Consensus 216 iiDSGTt~~~lP~~~~~~l~~~~~~~~----------~~~g~~~~~C~~~-----~~~P~i~f~f~g--~~~~i~~~~y~ 278 (329)
T 1dpj_A 216 AIDTGTSLITLPSGLAEMINAEIGAKK----------GWTGQYTLDCNTR-----DNLPDLIFNFNG--YNFTIGPYDYT 278 (329)
T ss_dssp EECTTCSCEEECHHHHHHHHHHHTCEE----------CTTSSEEECGGGG-----GGCCCEEEEETT--EEEEECTTTSE
T ss_pred EeeCCCCcEECCHHHHHHHHHHhCCcc----------CCCCeEEEECCCC-----CcCCcEEEEECC--EEEEECHHHhE
Confidence 999999999999999999998874321 011111 246543 358999999997 89999999999
Q ss_pred EEeCCceEEE-EEEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 328 VKVNEEVVCL-GFLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 328 ~~~~~~~~C~-~~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
++.. ..|+ ++..... ...+.||||++|||++|+|||++++|||||+
T Consensus 279 ~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 327 (329)
T 1dpj_A 279 LEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAK 327 (329)
T ss_dssp EEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEE
Confidence 9865 4798 5655421 1246899999999999999999999999997
No 5
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-54 Score=418.08 Aligned_cols=305 Identities=17% Similarity=0.209 Sum_probs=245.6
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCC--CCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCD--SSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGS 101 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~--~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~ 101 (394)
++.+||++ .+.+|+++|.||||||+++|+|||||+++||+|. .|.. .. ..+.+..|.... .+++.+++
T Consensus 2 ~~~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~--~~-----~~~~~~~C~~~~-~y~~~~Ss 71 (334)
T 1j71_A 2 DVPTTLIN--EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQV--TY-----SGQTNNFCKQEG-TFDPSSSS 71 (334)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECC--CS-----TTCCTTGGGSSC-CBCGGGCT
T ss_pred ceeEEEec--CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcC--cc-----cccccccccCCC-cCCcccCC
Confidence 57899998 4789999999999999999999999999999876 5510 00 012334676543 24555455
Q ss_pred CCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCCC------
Q 040581 102 DTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPI------ 175 (394)
Q Consensus 102 ~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~------ 175 (394)
++....|.|.+.|+ +|+.++|.+++|+|++++. +++++.|||++.. ...+||||||+...
T Consensus 72 T~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~-------~~~~~~fg~~~~~------~~~~GilGLg~~~~~~~~~~ 137 (334)
T 1j71_A 72 SAQNLNQDFSIEYG-DLTSSQGSFYKDTVGFGGI-------SIKNQQFADVTTT------SVDQGIMGIGFTADEAGYNL 137 (334)
T ss_dssp TCEEEEEEEEEEBT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEE------SSSSCEEECSCGGGSSTTCC
T ss_pred CcccCCCceEEEEC-CCCEEEEEEEEEEEEECCE-------EEccEEEEEEEec------CCCccEEEEcCCcccCcccc
Confidence 56667899999998 8888999999999999986 7889999999875 25799999998753
Q ss_pred --chhhhhhcccCC-cceEEEeecCC---CCeEEEcCCC--CCCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCc
Q 040581 176 --SLPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTS--TTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGL 247 (394)
Q Consensus 176 --s~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~--~~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~ 247 (394)
+++.+|.+++.+ +++||+||.+. .|.|+|||+| ++.|++.|+|+... .+|.|.|++|+|+++.+... ..
T Consensus 138 ~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~~~~~~--~~ 214 (334)
T 1j71_A 138 YDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS-VELRVHLGSINFDGTSVSTN--AD 214 (334)
T ss_dssp CCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS-SSCEEEEEEEEETTEEEEEE--EE
T ss_pred CCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC-CeEEEEEeEEEECCEeccCC--cc
Confidence 678899999888 68999999874 8999999975 47899999999876 79999999999999988653 56
Q ss_pred eEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeE
Q 040581 248 TKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSM 327 (394)
Q Consensus 248 ~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~ 327 (394)
+||||||++++||+++|++|++++.+... .......+..|+. +|.|+|+|.+ +++++||+++|+
T Consensus 215 ~iiDSGTt~~~lP~~~~~~l~~~~~~~~~-------~~~~~~~~~~C~~--------~p~i~f~f~~-g~~~~i~~~~y~ 278 (334)
T 1j71_A 215 VVLDSGTTITYFSQSTADKFARIVGATWD-------SRNEIYRLPSCDL--------SGDAVFNFDQ-GVKITVPLSELI 278 (334)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHHTCEEE-------TTTTEEECSSSCC--------CSEEEEEEST-TCEEEEEGGGGE
T ss_pred EEEeCCCCcEecCHHHHHHHHHHcCCccc-------CCCceEEEEcCCC--------CCceEEEEcC-CcEEEECHHHhe
Confidence 99999999999999999999988764321 1100111145752 7999999964 499999999999
Q ss_pred EEeCCceEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 328 VKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 328 ~~~~~~~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
++..++..|+..+... +.||||++|||++|+|||++++|||||+
T Consensus 279 ~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~ 322 (334)
T 1j71_A 279 LKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQ 322 (334)
T ss_dssp EECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred eecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEe
Confidence 9875555698655433 2589999999999999999999999995
No 6
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.1e-54 Score=414.71 Aligned_cols=303 Identities=17% Similarity=0.169 Sum_probs=237.6
Q ss_pred eeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCC
Q 040581 28 PVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNT 107 (394)
Q Consensus 28 pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~~ 107 (394)
++..+..+.+|+++|.||||||+++|+|||||+++||+|.+|. .| |.... .+++.+++++....
T Consensus 7 ~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~-----------~c----~~~~~-~y~~~~SsT~~~~~ 70 (325)
T 2apr_A 7 PMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT-----------NC----GSGQT-KYDPNQSSTYQADG 70 (325)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS-----------SC----CTTSC-CBCGGGCTTCEEEE
T ss_pred eeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc-----------hH----hcCCC-CCCcccCCCeeeCC
Confidence 3333457889999999999999999999999999999999871 12 22221 23444344455567
Q ss_pred ceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCCC-------chhhh
Q 040581 108 CGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPI-------SLPSQ 180 (394)
Q Consensus 108 ~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~q 180 (394)
|.|.+.|+ +|+.++|.+++|+|++++. +++++.|||++...........+||||||+... ++..+
T Consensus 71 ~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~-------~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~ 142 (325)
T 2apr_A 71 RTWSISYG-DGSSASGILAKDNVNLGGL-------LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDN 142 (325)
T ss_dssp EEEEEECT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHH
T ss_pred CEEEEEEC-CCCCEEEEEEEEEEEECCE-------EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHH
Confidence 99999998 8888999999999999986 788999999987521111234899999998754 36678
Q ss_pred hhcccCC-cceEEEeecCC----CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEecc
Q 040581 181 LATGIGH-QRKFFMCLSSS----NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTI 253 (394)
Q Consensus 181 l~~~~~i-~~~Fs~~L~~~----~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTG 253 (394)
|.+++.+ +++||+||.+. .|.|+|||+|. +.|++.|+|+...+.+|.|.+++|+|+++ +... ...+|||||
T Consensus 143 l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~~~-~~~~iiDSG 220 (325)
T 2apr_A 143 LISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TVAS-SFDGILDTG 220 (325)
T ss_dssp HHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EEEC-CEEEEECTT
T ss_pred HHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ecCC-CceEEEecC
Confidence 8888877 78999999642 89999999864 78999999998655899999999999993 3222 456999999
Q ss_pred CceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeCCc
Q 040581 254 VPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEE 333 (394)
Q Consensus 254 Tt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~ 333 (394)
|++++||+++|+++++++.+.... . + ....+|+. ..+|+|+|+|+| .+++||+++|++... +
T Consensus 221 Ts~~~lP~~~~~~~~~~~~~~~~~-------~-g-~~~~~C~~------~~~p~i~f~f~g--~~~~ip~~~~~~~~~-~ 282 (325)
T 2apr_A 221 TTLLILPNNIAASVARAYGASDNG-------D-G-TYTISCDT------SAFKPLVFSING--ASFQVSPDSLVFEEF-Q 282 (325)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEECS-------S-S-CEEECSCG------GGCCCEEEEETT--EEEEECGGGGEEEEE-T
T ss_pred CccEECCHHHHHHHHHHHhcccCC-------C-C-eEEEECCC------CCCCcEEEEECC--EEEEECHHHEEEcCC-C
Confidence 999999999999999888654321 0 1 11235763 238999999998 599999999988754 5
Q ss_pred eEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeC
Q 040581 334 VVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTL 376 (394)
Q Consensus 334 ~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~ 376 (394)
..|++.+.... .+.||||++|||++|+|||++++|||||+.
T Consensus 283 ~~C~~~i~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 283 GQCIAGFGYGN--WGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp TEEEESEEEES--SSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CeEEEEEEcCC--CCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 68987554322 347999999999999999999999999973
No 7
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.6e-55 Score=425.94 Aligned_cols=309 Identities=20% Similarity=0.223 Sum_probs=244.9
Q ss_pred CeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCC
Q 040581 23 NSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSD 102 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~ 102 (394)
+....||.+ ..+.+|+++|.||||||+++|+|||||+++||+|..| .+..|..+. .+++.++++
T Consensus 44 ~~~~~~l~n-~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C--------------~~~~C~~~~-~y~~~~SsT 107 (370)
T 3psg_A 44 LIGDEPLEN-YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC--------------SSLACSDHN-QFNPDDSST 107 (370)
T ss_dssp SSCCCTTGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC--------------CSGGGTTSC-CBCGGGCTT
T ss_pred ccceeccee-ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCC--------------CCcccCCCC-CCCCccCcC
Confidence 456778887 3678999999999999999999999999999999885 334566543 244444444
Q ss_pred CCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCcccc-CCCCCcceeeecCCCCC------
Q 040581 103 TTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPI------ 175 (394)
Q Consensus 103 ~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~------ 175 (394)
+....|.|.+.|+ +|+ ++|.+++|+|+|++. .++++.|||++..... .....+|||||||++..
T Consensus 108 ~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~-------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~ 178 (370)
T 3psg_A 108 FEATSQELSITYG-TGS-MTGILGYDTVQVGGI-------SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGAT 178 (370)
T ss_dssp CEEEEEEEEEESS-SCE-EEEEEEEEEEEETTE-------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCC
T ss_pred cEECCcEEEEEeC-Cce-EEEEEEEEEEeeCCc-------ccCCeEEEEEEeecccccccCCccceeccCCccccccCCC
Confidence 5667899999998 665 899999999999986 7889999999876321 12356899999998764
Q ss_pred chhhhhhcccCC-cceEEEeecCC---CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceE
Q 040581 176 SLPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTK 249 (394)
Q Consensus 176 s~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~i 249 (394)
++..+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.+++|+|+++.+.......+|
T Consensus 179 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~-~~w~v~l~~i~v~g~~~~~~~~~~ai 257 (370)
T 3psg_A 179 PVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE-GYWQITLDSITMDGETIACSGGCQAI 257 (370)
T ss_dssp CHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE-TTEEEEECEEESSSSEEECTTCEEEE
T ss_pred CHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc-ceeEEEEeEEEECCEEEecCCCceEE
Confidence 356788888887 78999999986 99999999875 8999999999876 89999999999999877542145699
Q ss_pred EeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEE
Q 040581 250 LSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVK 329 (394)
Q Consensus 250 iDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~ 329 (394)
+||||+++++|++++++|.+++.+... ........|... ..+|+|+|+|+| ++++||+++|+++
T Consensus 258 iDTGTs~~~lP~~~~~~i~~~i~a~~~---------~~g~~~v~C~~~-----~~lP~i~f~~~g--~~~~l~~~~yi~~ 321 (370)
T 3psg_A 258 VDTGTSLLTGPTSAIANIQSDIGASEN---------SDGEMVISCSSI-----DSLPDIVFTIDG--VQYPLSPSAYILQ 321 (370)
T ss_dssp ECTTCCSEEEEHHHHHHHHHHTTCEEC---------TTCCEECCGGGG-----GGCCCEEEEETT--EEEEECHHHHEEE
T ss_pred EcCCCCcEECCHHHHHHHHHHhCCccc---------CCCcEEEECCCc-----ccCCcEEEEECC--EEEEECHHHhccc
Confidence 999999999999999999887743211 111112457654 358999999987 9999999999998
Q ss_pred eCCceEEEE-EEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 330 VNEEVVCLG-FLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 330 ~~~~~~C~~-~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
.+ ..|+. +..... ..++.||||++|||++|+|||++++|||||+
T Consensus 322 -~~-~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~ 368 (370)
T 3psg_A 322 -DD-DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAP 368 (370)
T ss_dssp -CS-SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred -CC-CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEE
Confidence 33 46984 554321 1134699999999999999999999999996
No 8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=5.5e-55 Score=426.46 Aligned_cols=310 Identities=15% Similarity=0.209 Sum_probs=246.3
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDT 103 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~ 103 (394)
...+||++ ..+.+|+++|.||||||+|+|+|||||+++||+|..|. + .+..|..+. .+++.+++++
T Consensus 50 ~~~~~l~n-~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~----~--------~~~~C~~~~-~y~~~~SsT~ 115 (383)
T 2x0b_A 50 TSSVILTN-YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCS----R--------LYTACVYHK-LFDASDSSSY 115 (383)
T ss_dssp -CEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSC----T--------TSHHHHTSC-CBCGGGCTTC
T ss_pred cceEeeee-cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCC----C--------CcccccCCC-CCCCCCCCcE
Confidence 45689997 46789999999999999999999999999999999861 0 124565443 2445545556
Q ss_pred CCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCcccc-CCCCCcceeeecCCCCCc------
Q 040581 104 TTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPIS------ 176 (394)
Q Consensus 104 ~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------ 176 (394)
..+.|.|.+.|+ +|+ ++|.+++|+|+|++. .++ +.|||++..... .....+|||||||++..+
T Consensus 116 ~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~-------~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~ 185 (383)
T 2x0b_A 116 KHNGTELTLRYS-TGT-VSGFLSQDIITVGGI-------TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 185 (383)
T ss_dssp EEEEEEEEEECS-SCE-EEEEEEEEEEEETTE-------EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred EECCcEEEEEcC-Ccc-EEEEEEeeEEEEcCc-------eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCc
Confidence 677899999998 654 899999999999986 778 999999876211 123578999999997654
Q ss_pred hhhhhhcccCC-cceEEEeecCC-------CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCC
Q 040581 177 LPSQLATGIGH-QRKFFMCLSSS-------NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEG 246 (394)
Q Consensus 177 ~~~ql~~~~~i-~~~Fs~~L~~~-------~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~ 246 (394)
+..+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+......
T Consensus 186 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~-~~w~v~l~~i~v~~~~~~~~~~~ 264 (383)
T 2x0b_A 186 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKGVSVGSSTLLCEDGC 264 (383)
T ss_dssp HHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST-TSCEEEECEEEESSCCCBSTTCE
T ss_pred HHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC-ceEEEEEeEEEeCCceEEcCCCc
Confidence 55678888877 79999999875 79999999874 7899999999875 89999999999999864322145
Q ss_pred ceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCe
Q 040581 247 LTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNS 326 (394)
Q Consensus 247 ~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y 326 (394)
.+|+||||+++++|++++++|.+++.+. . ..+ .....|+.. ..+|+|+|+|+| ++|+|+|++|
T Consensus 265 ~aiiDTGTs~~~lP~~~~~~i~~~i~a~--------~-~~g-~~~v~C~~~-----~~~P~i~f~~~g--~~~~l~~~~y 327 (383)
T 2x0b_A 265 LALVDTGASYISGSTSSIEKLMEALGAK--------K-RLF-DYVVKCNEG-----PTLPDISFHLGG--KEYTLTSADY 327 (383)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHHTCE--------E-CSS-CEEEEGGGT-----TTCCCEEEEETT--EEEEECHHHH
T ss_pred EEEEcCCCceEEcCHHHHHHHHHHhCCc--------c-cCC-cEEEecccc-----ccCceEEEEECC--EEEEECHHHh
Confidence 6999999999999999999999887432 1 111 112468754 358999999987 9999999999
Q ss_pred EEEeCC--ceEEE-EEEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 327 MVKVNE--EVVCL-GFLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 327 ~~~~~~--~~~C~-~~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
+++..+ +..|+ ++..... ...+.||||++|||++|+|||++++|||||+
T Consensus 328 i~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~ 381 (383)
T 2x0b_A 328 VFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFAL 381 (383)
T ss_dssp BCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred EeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEE
Confidence 987653 45898 5765431 1245799999999999999999999999996
No 9
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.6e-54 Score=418.37 Aligned_cols=310 Identities=18% Similarity=0.216 Sum_probs=244.5
Q ss_pred CeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCC
Q 040581 23 NSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSD 102 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~ 102 (394)
..+.+||.+ ..+.+|+++|.||||||+++|+|||||+++||+|..| .+..|..+. .+++.++++
T Consensus 11 ~~~~~~l~n-~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C--------------~~~~C~~~~-~y~~~~SsT 74 (351)
T 1tzs_A 11 QSAKEPLIN-YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC--------------TSPACKTHS-RFQPSQSST 74 (351)
T ss_dssp ---CCTTGG-GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTC--------------CSGGGTTSC-CBCGGGCTT
T ss_pred Cccceecee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC--------------CccccCCCC-cCCcccCcc
Confidence 345688886 4678999999999999999999999999999999886 234565433 244444555
Q ss_pred CCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccC-CCCCcceeeecCCCCCc-----
Q 040581 103 TTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQG-LARGARGMLGLGRAPIS----- 176 (394)
Q Consensus 103 ~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~s----- 176 (394)
+....|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++...... .....+||||||++..+
T Consensus 75 ~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~ig~~-------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 145 (351)
T 1tzs_A 75 YSQPGQSFSIQYG-TGS-LSGIIGADQVSVEGL-------TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVT 145 (351)
T ss_dssp CBCCSCEEEEESS-SCE-EEEEEEEEEEEETTE-------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCC
T ss_pred eEECCCEEEEEeC-CCC-eEEEEEEeEEEECCe-------EECCeEEEEEEeccccccccCCCceEEecCCccccccCCC
Confidence 7777899999998 665 899999999999986 78899999998762111 13468999999987654
Q ss_pred -hhhhhhcccCC-cceEEEeecCC-----CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCc
Q 040581 177 -LPSQLATGIGH-QRKFFMCLSSS-----NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGL 247 (394)
Q Consensus 177 -~~~ql~~~~~i-~~~Fs~~L~~~-----~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~ 247 (394)
+..+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+.......
T Consensus 146 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~ 224 (351)
T 1tzs_A 146 PVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ-AYWQIALDNIQVGGTVMFCSEGCQ 224 (351)
T ss_dssp CHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE-TTEEEEEEEEEETTEEEECTTCEE
T ss_pred cHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC-ceEEEEeCEEEECCceEEcCCCce
Confidence 56788888877 79999999986 79999999864 7899999999865 899999999999998754221346
Q ss_pred eEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeE
Q 040581 248 TKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSM 327 (394)
Q Consensus 248 ~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~ 327 (394)
+||||||++++||+++|++|.+++.+.. ..+ .....|+... .+|+|+|+|+| ++++||+++|+
T Consensus 225 aiiDSGTs~~~lP~~~~~~l~~~~~~~~---------~~g-~~~~~C~~~~-----~~P~i~f~f~g--~~~~i~~~~yi 287 (351)
T 1tzs_A 225 AIVDTGTSLITGPSDKIKQLQNAIGAAP---------VDG-EYAVECANLN-----VMPDVTFTING--VPYTLSPTAYT 287 (351)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHHTCEE---------CSS-SEEECGGGGG-----GSCCEEEEETT--EEEEECTTTSE
T ss_pred EEeccCCcceeCCHHHHHHHHHHhCCcc---------cCC-eEEEeCCCCc-----cCCcEEEEECC--EEEEECHHHhE
Confidence 9999999999999999999998874321 111 1123687643 48999999987 99999999999
Q ss_pred EEeCC--ceEEE-EEEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 328 VKVNE--EVVCL-GFLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 328 ~~~~~--~~~C~-~~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
++..+ +..|+ ++..... ...+.||||++|||++|+|||++++|||||+
T Consensus 288 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~ 340 (351)
T 1tzs_A 288 LLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAP 340 (351)
T ss_dssp ECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEE
T ss_pred eeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEE
Confidence 87542 35798 5665431 1245799999999999999999999999996
No 10
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.1e-54 Score=416.39 Aligned_cols=307 Identities=17% Similarity=0.168 Sum_probs=243.5
Q ss_pred CeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCC
Q 040581 23 NSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSD 102 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~ 102 (394)
+...+||++ ..+++|+++|.||||||+++|+|||||+++||+|..| .+..|..+. .+++.++++
T Consensus 2 ~~~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C--------------~~~~C~~~~-~y~~~~SsT 65 (323)
T 3cms_A 2 EVASVPLTN-YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYC--------------KSNACKNHQ-RFDPRKSST 65 (323)
T ss_dssp CCEEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC--------------CSHHHHTSC-CBCGGGCTT
T ss_pred CcceeeeEe-ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCC--------------CcccccCCC-CCCCccCCC
Confidence 345689988 4678999999999999999999999999999999886 234555432 234444444
Q ss_pred CCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCcccc-CCCCCcceeeecCCCCC------
Q 040581 103 TTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPI------ 175 (394)
Q Consensus 103 ~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~------ 175 (394)
+....|.|.+.|+ +|+ ++|.+++|+|++++. +++++.|||++..... ......+||||||++..
T Consensus 66 ~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~ig~~-------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 136 (323)
T 3cms_A 66 FQNLGKPLSIHYG-TGS-MQGILGYDTVTVSNI-------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSI 136 (323)
T ss_dssp CEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE-------EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCC
T ss_pred eEECCcEEEEEeC-CCC-eEEEEEEEEEEECCe-------EEeccEEEEEEecccccccccCCceEEecCcchhhccCCC
Confidence 6667899999998 654 899999999999986 7889999999875210 01246799999998754
Q ss_pred chhhhhhcccCC-cceEEEeecCC--CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEE
Q 040581 176 SLPSQLATGIGH-QRKFFMCLSSS--NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKL 250 (394)
Q Consensus 176 s~~~ql~~~~~i-~~~Fs~~L~~~--~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~ii 250 (394)
++..+|.+++.+ +++||+||.+. .|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+..+....+||
T Consensus 137 ~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~aii 215 (323)
T 3cms_A 137 PVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ-QYWQFTVDSVTISGVVVACEGGCQAIL 215 (323)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB-TTBEEEEEEEEETTEEEESTTCEEEEE
T ss_pred CHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC-CeEEEEEeeEEECCEEeecCCCcEEEE
Confidence 466788888877 79999999887 79999999874 7899999999875 899999999999998875432346999
Q ss_pred eccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEe
Q 040581 251 STIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKV 330 (394)
Q Consensus 251 DTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~ 330 (394)
||||++++||++++++|++++.+.. ...+ .....|+.. ..+|+|+|+|+| ++++|||++|+++
T Consensus 216 DSGTt~~~lP~~~~~~l~~~~~~~~--------~~~g-~~~~~C~~~-----~~~P~i~f~f~g--~~~~i~~~~y~~~- 278 (323)
T 3cms_A 216 DTGTSKLVGPSSDILNIQQAIGATQ--------NQYG-EFDIDCDNL-----SYMPTVVFEING--KMYPLTPSAYTSQ- 278 (323)
T ss_dssp CTTCCSEEECHHHHHHHHHHHTCEE--------ETTT-EEEECTTCT-----TTSCCEEEEETT--EEEEECHHHHEEE-
T ss_pred ecCCccEeCCHHHHHHHHHHhCCee--------cCCC-cEEEECCCC-----ccCceEEEEECC--EEEEECHHHhccC-
Confidence 9999999999999999998874321 1111 112357643 358999999987 9999999999998
Q ss_pred CCceEEEE-EEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 331 NEEVVCLG-FLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 331 ~~~~~C~~-~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
++..|+. +..... .+.||||++|||++|+|||++++|||||+
T Consensus 279 -~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 321 (323)
T 3cms_A 279 -DQGFCTSGFQSENH--SQKWILGDVFIREYYSVFDRANNLVGLAK 321 (323)
T ss_dssp -ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred -CCCEEEEEEEeCCC--CCcEEECHHHhhceEEEEECCCCEEEEEE
Confidence 3458985 665432 35799999999999999999999999997
No 11
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.8e-54 Score=418.86 Aligned_cols=320 Identities=17% Similarity=0.167 Sum_probs=252.2
Q ss_pred CCCeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCC-CcccCCCCCCCCCCC
Q 040581 21 SVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQ-SIQCSRSGKSPVPGN 99 (394)
Q Consensus 21 ~~~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~-~~~C~~~~~~~~~~~ 99 (394)
..+...+||++ ..+++|+++|.||||||+++|+|||||+++||+|..| . +..|.... .+++.+
T Consensus 4 ~g~~~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C--------------~~~~~C~~~~-~y~~~~ 67 (361)
T 1mpp_A 4 DGSVDTPGLYD-FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGC--------------DNSEGCVGKR-FFDPSS 67 (361)
T ss_dssp -CCEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTC--------------CGGGTCCSSC-CBCGGG
T ss_pred CCccceEEeec-CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCC--------------CCCccCCCCC-cCCCcc
Confidence 46678899998 4678999999999999999999999999999999886 2 23454432 244444
Q ss_pred CCCCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccc-----c-CCCCCcceeeecCCC
Q 040581 100 GSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLL-----Q-GLARGARGMLGLGRA 173 (394)
Q Consensus 100 ~~~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~-----~-~~~~~~~GIlGLg~~ 173 (394)
++++....|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++.... . ......+||||||++
T Consensus 68 SsT~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~-------~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~ 138 (361)
T 1mpp_A 68 SSTFKETDYNLNITYG-TGG-ANGIYFRDSITVGGA-------TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYP 138 (361)
T ss_dssp CTTCEEEEEEEEEECS-SCE-EEEEEEEEEEEETTE-------EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCG
T ss_pred CCceEecCCeEEEEEC-Cce-EEEEEEEEEEEECCE-------EEeceEEEEEEeccCccccccccccCCCCCEEEeCCc
Confidence 4456667899999998 666 899999999999986 788999999987632 1 113568999999987
Q ss_pred CCc------------hhhhhhcccCC-cceEEEeecCC--CCeEEEcCCCC--CCCCceEEecccCCC---ceEEEEeEE
Q 040581 174 PIS------------LPSQLATGIGH-QRKFFMCLSSS--NGVVLSHHTST--TKLPLMYTPLIGKSQ---DYFINVKSI 233 (394)
Q Consensus 174 ~~s------------~~~ql~~~~~i-~~~Fs~~L~~~--~G~l~fGg~~~--~~g~~~~tpl~~~~~---~y~v~l~~i 233 (394)
..+ ++.+|.+++.+ +++||+||.+. .|.|+|||++. +.|++.|+|+..... +|.|.|++|
T Consensus 139 ~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i 218 (361)
T 1mpp_A 139 DNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGV 218 (361)
T ss_dssp GGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEE
T ss_pred ccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEE
Confidence 544 55678888877 69999999985 89999999864 789999999987643 999999999
Q ss_pred EEcCEEEEEecCCceE-EeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCC-CeEEEE
Q 040581 234 KINGNPLSVTIEGLTK-LSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAV-PVIDFV 311 (394)
Q Consensus 234 ~v~~~~~~~~~~~~~i-iDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~-P~i~f~ 311 (394)
+|+++.+.......+| |||||++++||+++|++|++++.+.. ....+ .....|+... .+ |+|+|+
T Consensus 219 ~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~-------~~~~g-~~~~~C~~~~-----~~~p~i~f~ 285 (361)
T 1mpp_A 219 KIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA-------TESQQ-GYTVPCSKYQ-----DSKTTFSLV 285 (361)
T ss_dssp EETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC-------EEETT-EEEEEHHHHT-----TCCCEEEEE
T ss_pred EECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc-------cCCCC-cEEEECCCcc-----cCCCcEEEE
Confidence 9999887432135699 99999999999999999998875432 22111 1124687643 46 999999
Q ss_pred E--cC---cceEEEEccCCeEEEeCC-ceEEE-EEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCCCC
Q 040581 312 L--QS---EMVKWRFYGSNSMVKVNE-EVVCL-GFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDF 384 (394)
Q Consensus 312 f--~g---~~~~~~i~~~~y~~~~~~-~~~C~-~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~~~ 384 (394)
| ++ ++++++||+++|+++... +..|+ ++.... .+.||||++|||++|+|||++++||||| ++.|...
T Consensus 286 f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~---~~~~iLG~~fl~~~yvvfD~~~~~igfa---~~~~~~~ 359 (361)
T 1mpp_A 286 LQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG---GNQFIVGNLFLRFFVNVYDFGKNRIGFA---PLASGYE 359 (361)
T ss_dssp EECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES---SSCCEEEHHHHTTEEEEEETTTTEEEEE---EBCTTTC
T ss_pred EEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC---CCCEEEChHHhccEEEEEECCCCEEEEE---EcccCCC
Confidence 9 61 138999999999998753 45897 666542 3479999999999999999999999999 4556643
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.1e-54 Score=417.62 Aligned_cols=311 Identities=17% Similarity=0.243 Sum_probs=245.5
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCC--CCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCD--SSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGS 101 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~--~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~ 101 (394)
++.+||.+ .+++|+++|.||||||+++|+|||||+++||+|. .|... +. +..+..|.... .+++.+++
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~-----~~--~~~~~~C~~~~-~y~~~~Ss 71 (342)
T 2qzx_A 2 PVAVTLHN--EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPK-----WR--GDKGDFCKSAG-SYSPASSR 71 (342)
T ss_dssp CEEEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCC-----SS--SCCTTGGGTTC-CBCGGGCT
T ss_pred ceeEEEec--CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCc-----cc--cCccccccCCC-cCCcccCC
Confidence 57889998 5789999999999999999999999999999865 45100 00 00134565443 24554455
Q ss_pred CCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCCC------
Q 040581 102 DTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPI------ 175 (394)
Q Consensus 102 ~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~------ 175 (394)
++....|.|.+.|+ +|+.++|.+++|+|++++. +++++.|||++.. ...+||||||+...
T Consensus 72 T~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~-------~v~~~~fg~~~~~------~~~~GilGLg~~~~~~~~~~ 137 (342)
T 2qzx_A 72 TSQNLNTRFDIKYG-DGSYAKGKLYKDTVGIGGV-------SVRDQLFANVWST------SARKGILGIGFQSGEATEFD 137 (342)
T ss_dssp TCEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEE------CSSSCEEECSCGGGCSSSSC
T ss_pred CcccCCCcEEEEeC-CCCeEEEEEEEEEEEECCE-------EecceEEEEEEec------CCCcCEEEEccccccCCCcc
Confidence 56667899999998 8888999999999999986 7889999999875 25799999998753
Q ss_pred --chhhhhhcccCC-cceEEEeecCC---CCeEEEcCCC--CCCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCc
Q 040581 176 --SLPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTS--TTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGL 247 (394)
Q Consensus 176 --s~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~--~~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~ 247 (394)
+++.+|.+++.+ +++||+||.+. .|.|+|||+| ++.|++.|+|+... .+|.|.|++|+|+++.+... ..
T Consensus 138 ~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~~~~~~--~~ 214 (342)
T 2qzx_A 138 YDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE-KKLTVGLRSVNVRGRNVDAN--TN 214 (342)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEETTEEEEEE--EE
T ss_pred CccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC-ceEEEEEeEEEECCEecCCC--cC
Confidence 678899999888 68999999864 8999999975 47899999999876 79999999999999988653 56
Q ss_pred eEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeE
Q 040581 248 TKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSM 327 (394)
Q Consensus 248 ~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~ 327 (394)
+||||||++++||+++|++|++++.+... +.+........+|+ .+|.|+|+|++ +++++||+++|+
T Consensus 215 aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~C~--------~~p~i~f~f~~-g~~~~i~~~~~~ 280 (342)
T 2qzx_A 215 VLLDSGTTISYFTRSIVRNILYAIGAQMK-----FDSAGNKVYVADCK--------TSGTIDFQFGN-NLKISVPVSEFL 280 (342)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHHTCEEE-----ECTTSCEEEEECTT--------CCCEEEEEETT-TEEEEEEGGGGE
T ss_pred EEEeCCCCCEEcCHHHHHHHHHHhCCeee-----eccCCCcEEEEECC--------CCCcEEEEECC-CcEEEEcHHHhc
Confidence 99999999999999999999988865431 11110101112454 27999999964 499999999999
Q ss_pred EEeC-----CceEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCC
Q 040581 328 VKVN-----EEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCS 382 (394)
Q Consensus 328 ~~~~-----~~~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~ 382 (394)
++.. ++..|+..+... +.||||++|||++|+|||++++|||||+ +.|+
T Consensus 281 ~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~---~~~~ 333 (342)
T 2qzx_A 281 FQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMAP---VKYT 333 (342)
T ss_dssp ECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEE---BCCC
T ss_pred ccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEEe---eCCC
Confidence 8742 235798655543 2589999999999999999999999995 4454
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.1e-54 Score=412.63 Aligned_cols=305 Identities=18% Similarity=0.227 Sum_probs=244.2
Q ss_pred EEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q 040581 25 VAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTT 104 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~ 104 (394)
+.+||++ ..+++|+++|.||||||+++|+|||||+++||+|..| .+..|..+. .+++.+++++.
T Consensus 2 ~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C--------------~~~~C~~~~-~y~~~~SsT~~ 65 (324)
T 1am5_A 2 VTEQMKN-EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC--------------SAQACSNHN-KFKPRQSSTYV 65 (324)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTC--------------CSHHHHTSC-CBCGGGCTTCE
T ss_pred ceeeeec-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC--------------CcccccCCC-cCCCccCCCeE
Confidence 5689998 4678999999999999999999999999999999886 233454432 23444444466
Q ss_pred CCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccC-CCCCcceeeecCCCCCc------h
Q 040581 105 TNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQG-LARGARGMLGLGRAPIS------L 177 (394)
Q Consensus 105 ~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~s------~ 177 (394)
...|.|.+.|+ +|+ ++|.+++|+|++++. +++++.|||++...... .....+||||||++..+ +
T Consensus 66 ~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~-------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 136 (324)
T 1am5_A 66 ETGKTVDLTYG-TGG-MRGILGQDTVSVGGG-------SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPV 136 (324)
T ss_dssp EEEEEEEEECS-SCE-EEEEEEEEEEESSSS-------CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCH
T ss_pred eCCcEEEEEEC-CCC-eEEEEEECceeECCc-------EEcccEEEEEEecccccccCCCCceEEecCCccccccCCCch
Confidence 66799999998 664 599999999999986 77899999998762111 23568999999987643 6
Q ss_pred hhhhhcccCC-cceEEEeecCC---CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEe
Q 040581 178 PSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLS 251 (394)
Q Consensus 178 ~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiD 251 (394)
..+|.+++.+ +++||+||.+. .|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+... ...+|||
T Consensus 137 ~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~-~~~aiiD 214 (324)
T 1am5_A 137 FDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE-KYWQVALDGITVNGQTAACE-GCQAIVD 214 (324)
T ss_dssp HHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE-TTEEEEECEEEETTEECCCC-CEEEEEC
T ss_pred HHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC-cEEEEEEeEEEECCceeecc-CceEEEe
Confidence 6788888877 78999999886 89999999864 7899999999865 89999999999999875422 3569999
Q ss_pred ccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeC
Q 040581 252 TIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVN 331 (394)
Q Consensus 252 TGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~ 331 (394)
|||++++||+++|++|.+++.+. . ..+ .....|+.. ..+|+|+|+|+| ++++||+++|+++.
T Consensus 215 SGTt~~~lp~~~~~~l~~~~~~~-~--------~~g-~~~~~C~~~-----~~~P~i~f~f~g--~~~~i~~~~y~~~~- 276 (324)
T 1am5_A 215 TGTSKIVAPVSALANIMKDIGAS-E--------NQG-EMMGNCASV-----QSLPDITFTING--VKQPLPPSAYIEGD- 276 (324)
T ss_dssp TTCSSEEECTTTHHHHHHHHTCE-E--------CCC-CEECCTTSS-----SSSCCEEEEETT--EEEEECHHHHEEES-
T ss_pred cCCccEECCHHHHHHHHHHhCCc-c--------cCC-cEEEeCCCc-----ccCCcEEEEECC--EEEEECHHHhcccC-
Confidence 99999999999999999887533 1 111 112457653 358999999987 99999999999986
Q ss_pred CceEEE-EEEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 332 EEVVCL-GFLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 332 ~~~~C~-~~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
+..|+ ++..... ...+.||||++|||++|+|||++++|||||+
T Consensus 277 -~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~ 322 (324)
T 1am5_A 277 -QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAP 322 (324)
T ss_dssp -SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEE
T ss_pred -CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEE
Confidence 45798 5665431 1245799999999999999999999999997
No 14
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.7e-54 Score=413.20 Aligned_cols=304 Identities=17% Similarity=0.154 Sum_probs=238.2
Q ss_pred EeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCC
Q 040581 27 IPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTN 106 (394)
Q Consensus 27 ~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~ 106 (394)
.||++ ..+.+|+++|.||||||+++|++||||+++||+|..| .+..|.... .+++.+++++...
T Consensus 3 ~~l~n-~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C--------------~~~~C~~~~-~y~~~~SsT~~~~ 66 (320)
T 4aa9_A 3 EPLTS-YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYC--------------KSNVCKNHH-RFDPRKSSTFRNL 66 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTC--------------CSHHHHTSC-CBCGGGCTTCEEE
T ss_pred cccee-ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCC--------------CccccCCCC-CCCCCCCcCeEcC
Confidence 57777 3578999999999999999999999999999999886 233454432 2344444445556
Q ss_pred CceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCcccc-CCCCCcceeeecCCCCC------chhh
Q 040581 107 TCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPI------SLPS 179 (394)
Q Consensus 107 ~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~------s~~~ 179 (394)
.|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++..... ......+||||||++.. ++..
T Consensus 67 ~~~~~i~Yg-~gs-~~G~~~~D~v~ig~~-------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 137 (320)
T 4aa9_A 67 GKPLSIHYG-TGS-MEGFLGYDTVTVSNI-------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFD 137 (320)
T ss_dssp EEEEEEEET-TEE-EEEEEEEEEEEETTE-------EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHH
T ss_pred CcEEEEEEC-CcE-EEEEEEEEEEEECCE-------eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHH
Confidence 789999998 655 899999999999986 7889999999876211 11245799999998653 4677
Q ss_pred hhhcccCC-cceEEEeecCC--CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccC
Q 040581 180 QLATGIGH-QRKFFMCLSSS--NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIV 254 (394)
Q Consensus 180 ql~~~~~i-~~~Fs~~L~~~--~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGT 254 (394)
+|.+++.+ +++||+||.+. .|.|+|||+|. +.|++.|+|+... .+|.|.+++|+++++.+..+....++|||||
T Consensus 138 ~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGt 216 (320)
T 4aa9_A 138 NMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ-QYWQFTVDSVTINGVAVACVGGCQAILDTGT 216 (320)
T ss_dssp HHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB-TTBEEEECEEEETTEEEESTTCEEEEECTTC
T ss_pred HHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC-CceEEEEeEEEECCEEeccCCCcEEEEECCC
Confidence 89888888 78999999985 99999999874 7899999999865 8999999999999988764313469999999
Q ss_pred ceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeCCce
Q 040581 255 PYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEV 334 (394)
Q Consensus 255 t~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~ 334 (394)
++++||++++++|++++.+.. ........+|... ..+|+|+|+|+| ++++||+++|+... +.
T Consensus 217 t~~~lP~~~~~~i~~~~~~~~---------~~~g~~~~~C~~~-----~~~p~i~f~f~g--~~~~l~~~~y~~~~--~~ 278 (320)
T 4aa9_A 217 SVLFGPSSDILKIQMAIGATE---------NRYGEFDVNCGNL-----RSMPTVVFEING--RDYPLSPSAYTSKD--QG 278 (320)
T ss_dssp SSEEEEHHHHHHHHHHTTCEE---------CTTSCEEECGGGG-----GGCCCEEEEETT--EEEEECHHHHEEEE--TT
T ss_pred CcEECCHHHHHHHHHHhCCcc---------cCCCcEEEeCCCC-----CcCceEEEEECC--EEEEECHHHhccCC--CC
Confidence 999999999999998874321 1111112357654 348999999987 99999999999873 45
Q ss_pred EEEE-EEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeC
Q 040581 335 VCLG-FLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTL 376 (394)
Q Consensus 335 ~C~~-~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~ 376 (394)
.|+. +..... .+.||||++|||++|+|||++++|||||+.
T Consensus 279 ~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~a 319 (320)
T 4aa9_A 279 FCTSGFQGDNN--SELWILGDVFIREYYSVFDRANNRVGLAKA 319 (320)
T ss_dssp EEEESEEEETT--CCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred eEEEEEEcCCC--CCcEEEChHHhcceEEEEECCCCEEEEEec
Confidence 8984 655332 357999999999999999999999999973
No 15
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.3e-53 Score=409.93 Aligned_cols=305 Identities=15% Similarity=0.253 Sum_probs=242.3
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCC--CCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDS--SADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGS 101 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~--c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~ 101 (394)
.+.+||.+ .++.|+++|.||||||+++|+|||||+++||++.. |. +| ..|...+ .+++.+++
T Consensus 2 ~i~~~l~~--~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-----------~~--~~C~~~~-~y~~~~Ss 65 (339)
T 3fv3_A 2 SISLSLIN--EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-----------KG--VDCKSSG-TFTPSSSS 65 (339)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-----------TT--CCTTTTC-CBCGGGCT
T ss_pred ceeeEEEc--CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-----------CC--CCCCCCC-cCCCccCc
Confidence 47899998 46799999999999999999999999999998543 30 00 1244322 23343333
Q ss_pred CCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCCCc-----
Q 040581 102 DTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPIS----- 176 (394)
Q Consensus 102 ~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s----- 176 (394)
+.....|.|.+.|+ +|+.++|.+++|+|+|++. +++++.|||++.. . ..+||||||++..+
T Consensus 66 T~~~~~~~~~i~Yg-~gs~~~G~~~~D~v~~g~~-------~v~~~~fg~~~~~--~----~~~GilGLg~~~~~~~~~~ 131 (339)
T 3fv3_A 66 SYKNLGAAFTIRYG-DGSTSQGTWGKDTVTINGV-------SITGQQIADVTQT--S----VDQGILGIGYTSNEAVYDT 131 (339)
T ss_dssp TCEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEE--S----SSSCEEECSCGGGCCCBCT
T ss_pred ceeeCCceEEEEEC-CCceEEEEEEEEEEEECCE-------EECceEEEEEEec--C----CCceeEEecCccccccccc
Confidence 45556789999998 8889999999999999986 7889999999876 2 36999999987542
Q ss_pred -----------hhhhhhcccCC-cceEEEeecCC---CCeEEEcCCC--CCCCCceEEecccCCCceEEEEeEEEEcCEE
Q 040581 177 -----------LPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTS--TTKLPLMYTPLIGKSQDYFINVKSIKINGNP 239 (394)
Q Consensus 177 -----------~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~--~~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~ 239 (394)
++.+|.+++.| +++||+||.+. .|.|+|||+| ++.|++.|+|+... .+|.|.+++|+++++.
T Consensus 132 ~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~~ 210 (339)
T 3fv3_A 132 SGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS-QALTISLASVNLKGSS 210 (339)
T ss_dssp TSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS-SSCEEEEEEEEESSCE
T ss_pred cccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC-ccEEEEEEEEEECCEe
Confidence 78899999888 68999999876 8999999975 47899999999876 7999999999999998
Q ss_pred EEEecCCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEE
Q 040581 240 LSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKW 319 (394)
Q Consensus 240 ~~~~~~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~ 319 (394)
+... ..++|||||++++||++++++|++++.+.... .. ........+|+. ..+|+|+|+|++ ++++
T Consensus 211 ~~~~--~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~----~~-~~~~~~~~~C~~------~~~p~i~f~f~~-g~~~ 276 (339)
T 3fv3_A 211 FSFG--DGALLDSGTTLTYFPSDFAAQLADKAGARLVQ----VA-RDQYLYFIDCNT------DTSGTTVFNFGN-GAKI 276 (339)
T ss_dssp EEEE--EEEEECTTBSSEEECHHHHHHHHHHHTCEEEE----EE-TTEEEEEECTTC------CCCSEEEEEETT-SCEE
T ss_pred ecCC--ccEEEeCCCCCEecCHHHHHHHHHHcCCEEcc----cc-ccCceEEEecCC------CCCCcEEEEECC-CCEE
Confidence 7653 56999999999999999999999988743210 00 001111235764 248999999974 3999
Q ss_pred EEccCCeEEEeCCceEE-EEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCC
Q 040581 320 RFYGSNSMVKVNEEVVC-LGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCS 382 (394)
Q Consensus 320 ~i~~~~y~~~~~~~~~C-~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~ 382 (394)
+||+++|+++..++ .| +++.. . +.||||++|||++|+|||++++||||| ++.|+
T Consensus 277 ~v~~~~~~~~~~~~-~C~~~i~~-~----~~~ilG~~fl~~~y~vfD~~~~~igfA---~~~~~ 331 (339)
T 3fv3_A 277 TVPNTEYVYQNGDG-TCLWGIQP-S----DDTILGDNFLRHAYLLYNLDANTISIA---QVKYT 331 (339)
T ss_dssp EEEGGGGEEECSSS-CEEESEEE-C----SSCEECHHHHTTEEEEEETTTTEEEEE---EBCCC
T ss_pred EECHHHheeeCCCC-eEEEEEEe-C----CcEEeChHHHhCEEEEEECCCCEEEEE---ecCCC
Confidence 99999999986544 56 56665 2 369999999999999999999999999 45565
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.6e-53 Score=409.23 Aligned_cols=305 Identities=17% Similarity=0.219 Sum_probs=232.9
Q ss_pred Eeee-ecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q 040581 27 IPVV-KDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTT 105 (394)
Q Consensus 27 ~pl~-~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~ 105 (394)
+++. ....+++|+++|.||||||+++|+|||||+++||+|..|. +..|.... .+++.+++++..
T Consensus 5 v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--------------~~~~~~~~-~y~~~~SsT~~~ 69 (329)
T 3c9x_A 5 APNHPSDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP--------------KSSATGHA-IYTPSKSSTSKK 69 (329)
T ss_dssp EEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--------------HHHHTTSC-CBCGGGCTTCEE
T ss_pred eeeecCCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC--------------ccccCCCC-cCCcccCcCceE
Confidence 3444 3346789999999999999999999999999999999871 11122211 123332333443
Q ss_pred -CCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccC-CCCCcceeeecCCCCCc-------
Q 040581 106 -NTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQG-LARGARGMLGLGRAPIS------- 176 (394)
Q Consensus 106 -~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~s------- 176 (394)
+.|.|.+.|+ +|+.++|.+++|+|+|++. +++++.|||++...... .....+||||||++..+
T Consensus 70 ~~~~~~~i~Yg-~Gs~~~G~~~~D~v~ig~~-------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 141 (329)
T 3c9x_A 70 VSGASWSISYG-DGSSSSGDVYTDKVTIGGF-------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQ 141 (329)
T ss_dssp CTTCBEEEECT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCC
T ss_pred cCCCeEEEEeC-CCCcEEEEEEEEEEEECCE-------EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCC
Confidence 4688999998 8888999999999999986 78899999998752111 11468999999987544
Q ss_pred --hhhhhhcccCCcceEEEeecCC-CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEe
Q 040581 177 --LPSQLATGIGHQRKFFMCLSSS-NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLS 251 (394)
Q Consensus 177 --~~~ql~~~~~i~~~Fs~~L~~~-~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiD 251 (394)
+..+|.++ ..+++||+||.++ +|.|+|||+|. +.|++.|+|+...+.+|.|.|++|+|+++.+... ...+|||
T Consensus 142 ~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~-~~~aiiD 219 (329)
T 3c9x_A 142 KTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRN-SIDGIAD 219 (329)
T ss_dssp CCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSC-CEEEEEC
T ss_pred CCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCC-CceEEEE
Confidence 45566654 2268999999986 99999999864 8999999999855589999999999999866422 3469999
Q ss_pred ccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCC-CCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEe
Q 040581 252 TIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAP-FSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKV 330 (394)
Q Consensus 252 TGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~ 330 (394)
|||++++||++++++|++++.+.. +. ..... ..+|+ ..+|+|+|+|+| ++++||+++|++..
T Consensus 220 SGTt~~~lp~~~~~~i~~~i~~a~------~~--~~~~~~~~~C~-------~~~P~i~f~f~g--~~~~ip~~~~~~~~ 282 (329)
T 3c9x_A 220 TGTTLLLLDDNVVDAYYANVQSAQ------YD--NQQEGVVFDCD-------EDLPSFSFGVGS--STITIPGDLLNLTP 282 (329)
T ss_dssp TTCCSEEECHHHHHHHHTTCTTCE------EE--TTTTEEEEETT-------CCCCCEEEEETT--EEEEECGGGGEEEE
T ss_pred CCCCcEeCCHHHHHHHHHhCCCcE------Ec--CCCCEEEEECC-------CCCCcEEEEECC--EEEEECHHHeeeec
Confidence 999999999999999987763221 11 11111 13565 248999999997 89999999999876
Q ss_pred CC--ceEEEE-EEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 331 NE--EVVCLG-FLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 331 ~~--~~~C~~-~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
.+ ...|++ +..... .+.||||++|||++|+|||++++|||||+
T Consensus 283 ~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 283 LEEGSSTCFGGLQSSSG--IGINIFGDVALKAALVVFDLGNERLGWAQ 328 (329)
T ss_dssp SSTTCSEEEESEEECTT--TTSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred cCCCCCeEEEEEEcCCC--CCcEEEChHHhccEEEEEECCCCEEeEec
Confidence 32 368987 444332 35799999999999999999999999996
No 17
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6.1e-54 Score=414.29 Aligned_cols=316 Identities=16% Similarity=0.209 Sum_probs=249.8
Q ss_pred cCCCeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCC
Q 040581 20 ASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGN 99 (394)
Q Consensus 20 ~~~~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~ 99 (394)
...+.+.+||.+. .+.+|+++|.||||||+++|++||||+++||+|..|.. ....|.... .+++.+
T Consensus 3 ~~~~~~~~~l~n~-~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~------------~~~~C~~~~-~y~~~~ 68 (341)
T 3k1w_A 3 LGNTTSSVILTNY-MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR------------LYTACVYHK-LFDASD 68 (341)
T ss_dssp -CCBCEEEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT------------TCHHHHTSC-CBCGGG
T ss_pred ccCCCccccceEc-cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCC------------CCCcccCCC-CCCCCc
Confidence 3567889999994 57899999999999999999999999999999998720 123565433 344444
Q ss_pred CCCCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCcccc-CCCCCcceeeecCCCCCc--
Q 040581 100 GSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPIS-- 176 (394)
Q Consensus 100 ~~~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-- 176 (394)
++++....|.|.+.|+ +|+ ++|.+++|+|+|++. ++ ++.|||++..... ......+||||||++..+
T Consensus 69 SsT~~~~~~~~~i~Yg-~gs-~~G~~~~D~v~ig~~-------~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 138 (341)
T 3k1w_A 69 SSSYKHNGTELTLRYS-TGT-VSGFLSQDIITVGGI-------TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIG 138 (341)
T ss_dssp CTTCEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE-------EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGG
T ss_pred CcCeeECCCEEEEEEC-CcE-EEEEEEEEEEEECCc-------ee-eEEEEEEEEccccccccCCcceEEECCchhhccc
Confidence 4556667899999998 655 999999999999986 77 8999999876321 223567999999997654
Q ss_pred ----hhhhhhcccCC-cceEEEeecCC-------CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEE
Q 040581 177 ----LPSQLATGIGH-QRKFFMCLSSS-------NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSV 242 (394)
Q Consensus 177 ----~~~ql~~~~~i-~~~Fs~~L~~~-------~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~ 242 (394)
+..+|.+++.+ +++||+||.+. .|.|+|||+|. +.|++.|+|+... .+|.|.+++|+|+++.+..
T Consensus 139 ~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~~~~ 217 (341)
T 3k1w_A 139 RVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKGVSVGSSTLLC 217 (341)
T ss_dssp GCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST-TSCEEEECCEEETTEEEEC
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC-CEEEEEEeEEEECCEEeec
Confidence 67888888877 68999999875 79999999864 7899999999865 8999999999999987543
Q ss_pred ecCCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEc
Q 040581 243 TIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFY 322 (394)
Q Consensus 243 ~~~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~ 322 (394)
.....++|||||++++||++++++|++++.+... ..+ ...+|... ..+|+|+|+|+| ++++|+
T Consensus 218 ~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--------~~g--~~~~C~~~-----~~~p~i~f~f~g--~~~~l~ 280 (341)
T 3k1w_A 218 EDGCLALVDTGASYISGSTSSIEKLMEALGAKKR--------LFD--YVVKCNEG-----PTLPDISFHLGG--KEYTLT 280 (341)
T ss_dssp TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSC--EEEEGGGG-----GGCCCEEEEETT--EEEEEC
T ss_pred CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec--------CCC--eEEeCCCC-----CcCCcEEEEECC--EEEEEC
Confidence 3134699999999999999999999988743311 111 22356543 348999999997 999999
Q ss_pred cCCeEEEeCC--ceEEE-EEEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEeCC
Q 040581 323 GSNSMVKVNE--EVVCL-GFLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLR 377 (394)
Q Consensus 323 ~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~ 377 (394)
+++|+++... +..|+ ++..... ...+.||||++|||++|+|||++++|||||+.+
T Consensus 281 ~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 281 SADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999987542 56898 4555321 124579999999999999999999999999854
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.2e-53 Score=408.31 Aligned_cols=300 Identities=15% Similarity=0.166 Sum_probs=231.3
Q ss_pred CCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCC-CCceee
Q 040581 33 VSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTT-NTCGVF 111 (394)
Q Consensus 33 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~-~~~~~~ 111 (394)
..+++|+++|.||||||+++|+|||||+++||+|..|. ...| .. ..+++.+++++.. +.|.|.
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--------------~~~~-~~-~~y~~~~SsT~~~~~~~~~~ 75 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT--------------ASEV-XQ-TIYTPSKSTTAKLLSGATWS 75 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--------------GGGC--C-CCBCGGGCTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC--------------cccc-cc-CccCCccCccceecCCCeEE
Confidence 36789999999999999999999999999999999871 1123 11 1234443344544 468999
Q ss_pred EEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCC-CCCcceeeecCCCCCc---------hhhhh
Q 040581 112 TQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGL-ARGARGMLGLGRAPIS---------LPSQL 181 (394)
Q Consensus 112 ~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql 181 (394)
+.|+ +|+.++|.+++|+|+|++. +++++.|||++....... ....+||||||++..+ +..+|
T Consensus 76 i~Yg-~Gs~~~G~~~~D~v~~g~~-------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 76 ISYG-DGSSSSGDVYTDTVSVGGL-------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp EECT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred EEeC-CCCcEEEEEEEEEEEECCE-------EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 9998 8888999999999999986 788999999987521111 1467999999987544 45667
Q ss_pred hcccCCcceEEEeecCC-CCeEEEcCCC--CCCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccCceee
Q 040581 182 ATGIGHQRKFFMCLSSS-NGVVLSHHTS--TTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYAT 258 (394)
Q Consensus 182 ~~~~~i~~~Fs~~L~~~-~G~l~fGg~~--~~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~ 258 (394)
.++ ..+++||+||.+. .|.|+|||+| ++.|++.|+|+...+.+|.|.|++|+|+++.+... ...+||||||++++
T Consensus 148 ~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~-~~~aiiDSGTt~~~ 225 (329)
T 1oew_A 148 KAS-LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKST-SIDGIADTGTTLLY 225 (329)
T ss_dssp TTT-SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEE-EEEEEECTTCCSEE
T ss_pred HHh-ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCC-CceEEEeCCCCCEE
Confidence 664 2268999999986 9999999986 47999999999855589999999999999866432 35699999999999
Q ss_pred echHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeCC--ceEE
Q 040581 259 MESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNE--EVVC 336 (394)
Q Consensus 259 lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C 336 (394)
||++++++|++++.+.. +....+ ....+|+ ..+|+|+|+|+| ++++||+++|++...+ ...|
T Consensus 226 lP~~~~~~l~~~i~~a~------~~~~~g-~~~~~C~-------~~~P~i~f~fgg--~~~~ip~~~~~~~~~~~~~~~C 289 (329)
T 1oew_A 226 LPATVVSAYWAQVSGAK------SSSSVG-GYVFPCS-------ATLPSFTFGVGS--ARIVIPGDYIDFGPISTGSSSC 289 (329)
T ss_dssp ECHHHHHHHHTTSTTCE------EETTTT-EEEEETT-------CCCCCEEEEETT--EEEEECHHHHEEEESSTTCSEE
T ss_pred CCHHHHHHHHHhCCCcE------EcCCCC-EEEEECC-------CCCCcEEEEECC--EEEEECHHHeeeeecCCCCCeE
Confidence 99999999987763221 111001 1113565 248999999976 9999999999987532 3689
Q ss_pred EEEEeCCCCCCCeeEECccceeeeEEEEeC-CCCeEEEEe
Q 040581 337 LGFLDGGSDLTSSIVLGGFQLEDNVMDFDL-GTSMLGFST 375 (394)
Q Consensus 337 ~~~~~~~~~~~~~~ilG~~flr~~yvvFD~-~~~rIGfa~ 375 (394)
++.+.... ..+.||||++|||++|+|||+ +++|||||+
T Consensus 290 ~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~ 328 (329)
T 1oew_A 290 FGGIQSSA-GIGINIFGDVALKAAFVVFNGATTPTLGFAS 328 (329)
T ss_dssp EESEEEST-TTSSEEECHHHHTTEEEEEECSSSCEEEEEE
T ss_pred EEEEEeCC-CCCceEEChHHhcCEEEEEECCCCceEEEec
Confidence 87443322 135799999999999999999 999999995
No 19
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.7e-53 Score=411.44 Aligned_cols=311 Identities=16% Similarity=0.230 Sum_probs=243.7
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCC--CC-CCCCCCCCCCCCCCCcccCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDS--SA-DVSSSSSRRLIPSQSIQCSRSGKSPVPGNG 100 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~--c~-~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~ 100 (394)
.+.+|+.+ .+++|+++|.||||||+++|++||||+++||+|.. |. +.. ......|...+ .+++.++
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~--------~~~~~~C~~~~-~y~~~~S 70 (342)
T 3pvk_A 2 AVPVTLHN--EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYS--------DQTADFCKQKG-TYDPSGS 70 (342)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST--------TCCTTGGGTTC-CBCGGGC
T ss_pred CcceEEec--CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccc--------ccccCCCCCCC-cCCCccC
Confidence 36788888 57899999999999999999999999999998654 41 000 01124565443 3445444
Q ss_pred CCCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCC------
Q 040581 101 SDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAP------ 174 (394)
Q Consensus 101 ~~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~------ 174 (394)
++.....|.|.+.|+ +|+.++|.+++|+|+|++. +++++.|||++.. ...+||||||++.
T Consensus 71 sT~~~~~~~~~i~Yg-~gs~~~G~~~~D~v~ig~~-------~v~~~~fg~~~~~------~~~~GilGLg~~~~~~~~~ 136 (342)
T 3pvk_A 71 SASQDLNTPFKIGYG-DGSSSQGTLYKDTVGFGGV-------SIKNQVLADVDST------SIDQGILGVGYKTNEAGGS 136 (342)
T ss_dssp TTCEEEEEEEEEECS-SSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEE------SSSSCEEECSCGGGCSSCS
T ss_pred cceeecCCeEEEEec-CCCeEEEEEEEEEEEECCE-------EecceEEEEEEcc------CCCccEEEecCcccccccc
Confidence 445566899999998 8888999999999999986 7889999999876 2579999999876
Q ss_pred -CchhhhhhcccCC-cceEEEeecCC---CCeEEEcCCC--CCCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCc
Q 040581 175 -ISLPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTS--TTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGL 247 (394)
Q Consensus 175 -~s~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~--~~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~ 247 (394)
.+++.+|.+++.| +++||+||.+. .|.|+|||+| ++.|++.|+|+... .+|.|.+++|+++++.+... ...
T Consensus 137 ~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~~~~~~-~~~ 214 (342)
T 3pvk_A 137 YDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD-RELRISLGSVEVSGKTINTD-NVD 214 (342)
T ss_dssp SCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEETTEEEEEE-EEE
T ss_pred CCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc-ceEEEEEeEEEECCEEecCC-Cce
Confidence 4688999999888 68999999875 7999999975 47999999999876 79999999999999988754 457
Q ss_pred eEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeE
Q 040581 248 TKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSM 327 (394)
Q Consensus 248 ~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~ 327 (394)
++|||||++++||++++++|++++.+.... ..........+|+ ..|+|+|+|++ +.+++||+++|+
T Consensus 215 ~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~C~--------~~p~i~f~f~~-g~~~~vp~~~~~ 280 (342)
T 3pvk_A 215 VLLDSGTTITYLQQDLADQIIKAFNGKLTQ-----DSNGNSFYEVDCN--------LSGDVVFNFSK-NAKISVPASEFA 280 (342)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHTTCEEEE-----CTTSCEEEEECSC--------CCSEEEEEEST-TCEEEEEGGGGE
T ss_pred EEEeCCCCCeecCHHHHHHHHHHcCCeecc-----cCCCceEEEEecC--------CCCceEEEECC-CCEEEEcHHHhe
Confidence 999999999999999999999888644320 0000000123455 25999999985 389999999999
Q ss_pred EEeC--Cc---eEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCC
Q 040581 328 VKVN--EE---VVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCS 382 (394)
Q Consensus 328 ~~~~--~~---~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~ 382 (394)
++.. ++ ..|+..+... +.||||++|||++|+|||++++|||||+ +.|+
T Consensus 281 ~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~---~~~~ 333 (342)
T 3pvk_A 281 ASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQ---VKYT 333 (342)
T ss_dssp EC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEE---BCCC
T ss_pred eeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEe---cCCC
Confidence 8732 22 5797555442 3689999999999999999999999994 5565
No 20
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.4e-53 Score=409.83 Aligned_cols=304 Identities=20% Similarity=0.247 Sum_probs=240.9
Q ss_pred EeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCC
Q 040581 27 IPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTN 106 (394)
Q Consensus 27 ~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~ 106 (394)
+||+ ..+++|+++|.||||||+++|+|||||+++||+|..| .+..|..+. .+++.+++++...
T Consensus 5 ~~l~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C--------------~~~~C~~~~-~y~~~~SsT~~~~ 67 (329)
T 1htr_B 5 EPMA--YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYC--------------QSQACTSHS-RFNPSESSTYSTN 67 (329)
T ss_dssp CGGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC--------------CSHHHHTSC-CBCGGGCTTCEEE
T ss_pred eeeE--EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC--------------CCcccCCCC-cCCCccCCCeEEC
Confidence 5777 3678999999999999999999999999999999886 233454432 2344444446666
Q ss_pred CceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccC-CCCCcceeeecCCCCCc------hhh
Q 040581 107 TCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQG-LARGARGMLGLGRAPIS------LPS 179 (394)
Q Consensus 107 ~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~s------~~~ 179 (394)
.|.|.+.|+ +|+ ++|.+++|+|++++. +++++.|||++...... .....+||||||++..+ +..
T Consensus 68 ~~~~~i~Yg-~gs-~~G~~~~D~v~~g~~-------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 138 (329)
T 1htr_B 68 GQTFSLQYG-SGS-LTGFFGYDTLTVQSI-------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQ 138 (329)
T ss_dssp EEEEEEEET-TEE-EEEEEEEEEEEETTE-------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHH
T ss_pred CcEEEEEeC-CCC-eEEEEEeeeEEEcce-------EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHH
Confidence 799999998 654 599999999999986 78899999998762111 12568999999987654 667
Q ss_pred hhhcccCC-cceEEEeecCC----CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEE-EecCCceEEe
Q 040581 180 QLATGIGH-QRKFFMCLSSS----NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLS-VTIEGLTKLS 251 (394)
Q Consensus 180 ql~~~~~i-~~~Fs~~L~~~----~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~-~~~~~~~iiD 251 (394)
+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+. ......+|||
T Consensus 139 ~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~~aiiD 217 (329)
T 1htr_B 139 GMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE-LYWQIGIEEFLIGGQASGWCSEGCQAIVD 217 (329)
T ss_dssp HHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS-SSCEEEECEEEETTEECCTTTTCEEEEEC
T ss_pred HHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC-ceEEEEEeEEEECCceeeecCCCceEEEe
Confidence 88888877 79999999987 79999999864 6899999999865 899999999999998754 1113469999
Q ss_pred ccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeC
Q 040581 252 TIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVN 331 (394)
Q Consensus 252 TGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~ 331 (394)
|||++++||+++|++|++++.+... ..+ .....|+... .+|+|+|+|+| ++++|||++|+++..
T Consensus 218 SGTt~~~lp~~~~~~l~~~~~~~~~--------~~g-~~~~~C~~~~-----~~P~i~f~f~g--~~~~i~~~~y~~~~~ 281 (329)
T 1htr_B 218 TGTSLLTVPQQYMSALLQATGAQED--------EYG-QFLVNCNSIQ-----NLPSLTFIING--VEFPLPPSSYILSNN 281 (329)
T ss_dssp TTCCSEEEEGGGHHHHHHHHTCEEC--------TTS-CEEECGGGGG-----GSCCEEEEETT--EEEEECHHHHEEECS
T ss_pred cCCccEECCHHHHHHHHHHhCCeec--------CCC-eEEEeCCCcc-----cCCcEEEEECC--EEEEECHHHhcccCC
Confidence 9999999999999999988753211 111 1124687543 48999999987 999999999999876
Q ss_pred CceEEE-EEEeCCC--CCCC-eeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 332 EEVVCL-GFLDGGS--DLTS-SIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 332 ~~~~C~-~~~~~~~--~~~~-~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
+ .|+ ++..... ...+ .||||++|||++|+|||++++|||||+
T Consensus 282 -g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~ 327 (329)
T 1htr_B 282 -G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFAT 327 (329)
T ss_dssp -S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred -C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEe
Confidence 4 898 5654321 1134 799999999999999999999999996
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.8e-53 Score=415.38 Aligned_cols=304 Identities=15% Similarity=0.205 Sum_probs=243.6
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDT 103 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~ 103 (394)
...+||.+ ..+++|+++|.||||||+++|+|||||+++||+|..| .+..|.... .+++.+++++
T Consensus 51 ~~~~pl~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C--------------~~~~C~~~~-~y~~~~SsT~ 114 (375)
T 1miq_A 51 NDVIELDD-VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKC--------------NSSGCSIKN-LYDSSKSKSY 114 (375)
T ss_dssp TBCCCGGG-TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTC--------------CSSGGGGSC-CBCGGGCTTC
T ss_pred cceEEccc-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCC--------------CcccccCCC-cCCCccCCce
Confidence 45578886 4678999999999999999999999999999999886 234565432 2344444446
Q ss_pred CCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccC----ccccCCCCCcceeeecCCCCC----
Q 040581 104 TTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPT----FLLQGLARGARGMLGLGRAPI---- 175 (394)
Q Consensus 104 ~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~GIlGLg~~~~---- 175 (394)
....|.|.+.|+ +|+ ++|.+++|+|+|++. ++++ .|||++. +. .......+||||||++..
T Consensus 115 ~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~-------~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~ 183 (375)
T 1miq_A 115 EKDGTKVDITYG-SGT-VKGFFSKDLVTLGHL-------SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGS 183 (375)
T ss_dssp EEEEEEEEEEET-TEE-EEEEEEEEEEEETTE-------EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSS
T ss_pred EECCcEEEEEeC-CCe-EEEEEEEEEEEEcCc-------eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccC
Confidence 667899999998 655 899999999999986 7788 9999987 31 111246799999998764
Q ss_pred --chhhhhhcccCC-cceEEEeecCC---CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCc
Q 040581 176 --SLPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGL 247 (394)
Q Consensus 176 --s~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~ 247 (394)
++..+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.++ |+|+++.+ . ...
T Consensus 184 ~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~-i~v~g~~~--~-~~~ 258 (375)
T 1miq_A 184 IDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD-LYWQIDLD-VHFGKQTM--E-KAN 258 (375)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS-SSSEEEEE-EEETTEEE--E-EEE
T ss_pred CCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC-ceEEEEEE-EEECCEEc--c-cce
Confidence 356788888877 69999999986 89999999874 7899999999865 89999999 99999887 2 467
Q ss_pred eEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeE
Q 040581 248 TKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSM 327 (394)
Q Consensus 248 ~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~ 327 (394)
+||||||++++||+++|++|++++.+... ...+ .....|+. ..+|+|+|+|+| ++++|||++|+
T Consensus 259 aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-------~~~g-~~~~~C~~------~~~P~i~f~f~g--~~~~l~~~~yi 322 (375)
T 1miq_A 259 VIVDSGTTTITAPSEFLNKFFANLNVIKV-------PFLP-FYVTTCDN------KEMPTLEFKSAN--NTYTLEPEYYM 322 (375)
T ss_dssp EEECTTBSSEEECHHHHHHHHHHHTCEEC-------TTSS-CEEEETTC------TTCCCEEEECSS--CEEEECGGGSE
T ss_pred EEecCCCccEEcCHHHHHHHHHHhCCccc-------CCCC-eEEEECCC------CCCCcEEEEECC--EEEEECHHHhE
Confidence 99999999999999999999988754211 1111 11246765 358999999987 99999999999
Q ss_pred EEeCC--ceEEE-EEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeC
Q 040581 328 VKVNE--EVVCL-GFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTL 376 (394)
Q Consensus 328 ~~~~~--~~~C~-~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~ 376 (394)
++... +..|+ ++..... ..+.||||++|||++|+|||++++|||||+.
T Consensus 323 ~~~~~~g~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~ 373 (375)
T 1miq_A 323 NPILEVDDTLCMITMLPVDI-DSNTFILGDPFMRKYFTVFDYDKESVGFAIA 373 (375)
T ss_dssp EESSSSSCSEEEESEEECCS-SSSEEEECHHHHHHEEEEEETTTTEEEEEEE
T ss_pred eeccCCCCCeEEEEEEECCC-CCCcEEECHHHhccEEEEEECCCCEEEEEEc
Confidence 98752 35898 6766542 1258999999999999999999999999973
No 22
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=8.4e-53 Score=404.37 Aligned_cols=305 Identities=13% Similarity=0.134 Sum_probs=240.6
Q ss_pred CeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCccc--CCCCCCCCCCCC
Q 040581 23 NSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQC--SRSGKSPVPGNG 100 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C--~~~~~~~~~~~~ 100 (394)
..+..||++ ..+..|+++|.|| ||+++|+|||||+++||+|..| .+..| ..+. .+++.++
T Consensus 5 ~~~~~~l~n-~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C--------------~~~~C~~~~~~-~y~~~~S 66 (330)
T 1yg9_A 5 VPLYKLVHV-FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQEC--------------VGGACVCPNLQ-KYEKLKP 66 (330)
T ss_dssp CCSCSCEEE-EECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTC--------------CSGGGGSTTCC-CCCCSSC
T ss_pred eeeEeeeec-CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCC--------------CCccCcccccC-ccCCCCC
Confidence 345567776 3567999999999 8999999999999999999886 23456 4332 3455544
Q ss_pred CCCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCCCc----
Q 040581 101 SDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPIS---- 176 (394)
Q Consensus 101 ~~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s---- 176 (394)
++....+.|.+.|+ +|+ ++|.+++|+|++++. +++++.|||++...........+||||||++..+
T Consensus 67 -T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~-------~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~ 136 (330)
T 1yg9_A 67 -KYISDGNVQVKFFD-TGS-AVGRGIEDSLTISQL-------TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALK 136 (330)
T ss_dssp -EEEEEEEEEEEETT-TEE-EEEEEEEEEEEETTE-------EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTS
T ss_pred -ceEECCCEEEEEEC-Cce-EEEEEEEEEEEECCE-------EEcCeEEEEEEEcccccccccCceEEEcCcchhccccC
Confidence 56566789999998 655 599999999999986 7889999999875111112467999999998765
Q ss_pred ---hhhhhhcccCCcceEEEeecCC-----CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCC
Q 040581 177 ---LPSQLATGIGHQRKFFMCLSSS-----NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEG 246 (394)
Q Consensus 177 ---~~~ql~~~~~i~~~Fs~~L~~~-----~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~ 246 (394)
+..+|.+++.++++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+... ..
T Consensus 137 ~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~~~~~-~~ 214 (330)
T 1yg9_A 137 GKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD-DSWKFRLDGVKIGDTTVAPA-GT 214 (330)
T ss_dssp CCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT-TSCCEECSEEEETTEEEECT-TC
T ss_pred CCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC-CEEEEEeCeEEECCEEEcCC-Cc
Confidence 6778888876789999999875 79999999864 7899999999854 89999999999999876522 46
Q ss_pred ceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCC-CC-CCceecccCCCCCCCCeEEEEEcCcceEEEEccC
Q 040581 247 LTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPV-AP-FSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGS 324 (394)
Q Consensus 247 ~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~-~~-~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~ 324 (394)
.+||||||++++||++++++|++++.+.. . ..+. .. ..+|+.. ..+|+|+|+|+| ++++||++
T Consensus 215 ~aiiDSGTs~~~lP~~~~~~l~~~~~~~~-------~-~~g~~~~~~~~C~~~-----~~~p~i~f~fgg--~~~~l~~~ 279 (330)
T 1yg9_A 215 QAIIDTSKAIIVGPKAYVNPINEAIGCVV-------E-KTTTRRICKLDCSKI-----PSLPDVTFVING--RNFNISSQ 279 (330)
T ss_dssp EEEECTTCSSEEEEHHHHHHHHHHHTCEE-------E-ECSSCEEEEECGGGG-----GGSCCEEEEETT--EEEEECHH
T ss_pred EEEEecCCccccCCHHHHHHHHHHhCCcc-------c-CCCceEEEEEECCCc-----cccCcEEEEECC--EEEEECHH
Confidence 79999999999999999999998874321 1 1110 11 2347643 358999999976 99999999
Q ss_pred CeEEEeCCceEEE-EEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeC
Q 040581 325 NSMVKVNEEVVCL-GFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTL 376 (394)
Q Consensus 325 ~y~~~~~~~~~C~-~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~ 376 (394)
+|+++. +..|+ ++..... .+.||||++|||++|+|||++++|||||+.
T Consensus 280 ~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfA~~ 328 (330)
T 1yg9_A 280 YYIQQN--GNLCYSGFQPCGH--SDHFFIGDFFVDHYYSEFNWENKTMGFGRS 328 (330)
T ss_dssp HHEEEE--TTEEEESEEEETT--CSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred HhcccC--CCcEEEEEEeCCC--CCeEEecHHHhhheEEEEECCCCEEEEEEC
Confidence 999987 45898 4554322 347999999999999999999999999973
No 23
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-51 Score=397.09 Aligned_cols=293 Identities=20% Similarity=0.232 Sum_probs=230.0
Q ss_pred EEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q 040581 25 VAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTT 104 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~ 104 (394)
-.+||++ .+..|+++|.||||||+++|+|||||+++||+|.....|++|+ .
T Consensus 3 ~~~~l~n--~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~~y~~s~Ss---------------------------~ 53 (340)
T 1wkr_A 3 GSVPATN--QLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKTSTS---------------------------S 53 (340)
T ss_dssp EEEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCCEECSSSCCCCCTTC---------------------------E
T ss_pred ccEeeec--cCcEEEEEEEECCCCcEEEEEEeCCChhheecCCCccCCcCCc---------------------------c
Confidence 4689998 3579999999999999999999999999999987532233332 2
Q ss_pred CCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCCCc--------
Q 040581 105 TNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPIS-------- 176 (394)
Q Consensus 105 ~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s-------- 176 (394)
...|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++.. .+ +...+||||||++..+
T Consensus 54 ~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~~g~~-------~v~~~~fg~~~~~--~~-~~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 54 ATSDKVSVTYG-SGS-FSGTEYTDTVTLGSL-------TIPKQSIGVASRD--SG-FDGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp EEEEEEEEECS-SCE-EEEEEEEEEEEETTE-------EEEEEEEEEEEEE--ES-CTTCSEEEECSCGGGGTTSEESCT
T ss_pred ccCceEEEEEC-CcE-EEEEEEEEEEEECCE-------EEcceEEEEEEcc--CC-CcCCCcEEECCccccccccccccc
Confidence 23588999998 765 899999999999986 7889999999986 33 3468999999987543
Q ss_pred ------hhhhhhcccCC-cceEEEeecCC------CCeEEEcCCCC--CCCCceEEecccC---CCceEEEEeEEEEcC-
Q 040581 177 ------LPSQLATGIGH-QRKFFMCLSSS------NGVVLSHHTST--TKLPLMYTPLIGK---SQDYFINVKSIKING- 237 (394)
Q Consensus 177 ------~~~ql~~~~~i-~~~Fs~~L~~~------~G~l~fGg~~~--~~g~~~~tpl~~~---~~~y~v~l~~i~v~~- 237 (394)
++.+|.+++.| +++||+||.+. .|.|+|||+|. +.|++.|+|+... +.+|.|. ++|+|++
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~ 200 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS 200 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC
Confidence 46678888877 68999999862 89999999864 8999999999874 3799999 9999998
Q ss_pred EEEEEecCCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcce
Q 040581 238 NPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMV 317 (394)
Q Consensus 238 ~~~~~~~~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~ 317 (394)
+.+.. ...+||||||++++||+++|++|.+++.+... . .......+|.... .+|+|+|+|+| .
T Consensus 201 ~~l~~--~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~-------~-~~g~~~~~C~~~~-----~~p~i~f~f~g--~ 263 (340)
T 1wkr_A 201 TSILS--STAGIVDTGTTLTLIASDAFAKYKKATGAVAD-------N-NTGLLRLTTAQYA-----NLQSLFFTIGG--Q 263 (340)
T ss_dssp EEEEE--EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC-------T-TTSSEEECHHHHH-----TCCCEEEEETT--E
T ss_pred eEccC--CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc-------C-CCCeEEeeccccc-----cCCcEEEEECC--E
Confidence 77753 35699999999999999999999877643211 0 0001123575432 47999999987 8
Q ss_pred EEEEccCCeEEEeC-------CceEE-EEEEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEeC
Q 040581 318 KWRFYGSNSMVKVN-------EEVVC-LGFLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTL 376 (394)
Q Consensus 318 ~~~i~~~~y~~~~~-------~~~~C-~~~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~ 376 (394)
+++|+|++|+++.. +...| +.+..... ..+..||||++|||++|+|||++++|||||+.
T Consensus 264 ~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 332 (340)
T 1wkr_A 264 TFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATT 332 (340)
T ss_dssp EEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEEC
T ss_pred EEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEec
Confidence 99999999998643 12345 45654321 11346999999999999999999999999963
No 24
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=7.8e-52 Score=396.89 Aligned_cols=301 Identities=17% Similarity=0.187 Sum_probs=232.0
Q ss_pred eeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCc
Q 040581 29 VVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNTC 108 (394)
Q Consensus 29 l~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~~~ 108 (394)
+.....+.+|+++|.|| ||+++|+|||||+++||+|..|. +..|.... .+++.+++ +..+.|
T Consensus 7 ~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--------------~~~c~~~~-~y~~~~Ss-~~~~~~ 68 (325)
T 1ibq_A 7 TTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP--------------SSEQTGHD-LYTPSSSA-TKLSGY 68 (325)
T ss_dssp EEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC--------------HHHHTTSC-CCBCCSSC-EECTTC
T ss_pred eEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC--------------ccccCCCC-CCCchhcC-CccCCC
Confidence 33333678999999999 89999999999999999999871 12233322 23343333 334578
Q ss_pred eeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCC-CCCcceeeecCCCCCc---------hh
Q 040581 109 GVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGL-ARGARGMLGLGRAPIS---------LP 178 (394)
Q Consensus 109 ~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~ 178 (394)
.|.+.|+ +|+.++|.+++|+|++++. +++++.|||++....... ....+||||||++..+ +.
T Consensus 69 ~~~i~Yg-~Gs~~~G~~~~D~v~ig~~-------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~ 140 (325)
T 1ibq_A 69 SWDISYG-DGSSASGDVYRDTVTVGGV-------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFF 140 (325)
T ss_dssp BEEEECS-SSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred EEEEEeC-CCCEEEEEEEEeEEEECCE-------EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHH
Confidence 9999998 8888999999999999986 788999999987521111 1468999999987544 45
Q ss_pred hhhhcccCCcceEEEeecCC-CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccCc
Q 040581 179 SQLATGIGHQRKFFMCLSSS-NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVP 255 (394)
Q Consensus 179 ~ql~~~~~i~~~Fs~~L~~~-~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt 255 (394)
.+|.++ ..+++||+||.++ .|.|+|||+|. +.|++.|+|+.....+|.|.|++|+|+++.+... ...+||||||+
T Consensus 141 ~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~-~~~aiiDSGTt 218 (325)
T 1ibq_A 141 DTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSS-GFSAIADTGTT 218 (325)
T ss_dssp HHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSC-CEEEEECTTCC
T ss_pred HHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCC-CceEEEeCCCC
Confidence 777765 3368999999987 99999999864 7999999999855589999999999999866422 45699999999
Q ss_pred eeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeCC--c
Q 040581 256 YATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNE--E 333 (394)
Q Consensus 256 ~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~ 333 (394)
+++||++++++|++++.+.. +....+ ....+|+ ..+|+|+|+|+| ++++||+++|++...+ .
T Consensus 219 ~~~lP~~~~~~i~~~i~~a~------~~~~~g-~~~~~C~-------~~~P~i~f~fgg--~~~~i~~~~~~~~~~~~~~ 282 (325)
T 1ibq_A 219 LILLDDEIVSAYYEQVSGAQ------ESYEAG-GYVFSCS-------TDLPDFTVVIGD--YKAVVPGKYINYAPVSTGS 282 (325)
T ss_dssp SEEECHHHHHHHHTTSTTCB------CCSSSS-SCEEETT-------CCCCCEEEEETT--EEEEECHHHHEEEESSTTC
T ss_pred cEeCCHHHHHHHHHhCCCce------EcCcCC-eEEEEcC-------CCCCcEEEEECC--EEEEECHHHhcccccCCCC
Confidence 99999999999988763221 111111 1123576 248999999976 9999999999987632 3
Q ss_pred eEEEE-EEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 334 VVCLG-FLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 334 ~~C~~-~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
..|++ +..... .+.||||++|||++|+|||++++|||||+
T Consensus 283 ~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 323 (325)
T 1ibq_A 283 STCYGGIQSNSG--LGLSILGDVFLKSQYVVFNSEGPKLGFAA 323 (325)
T ss_dssp SEEEESEEECTT--TCSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CeEEEEEEcCCC--CCceEEChHHhcCEEEEEECCCCEEEeee
Confidence 68987 444321 35799999999999999999999999996
No 25
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.1e-52 Score=415.49 Aligned_cols=306 Identities=12% Similarity=0.197 Sum_probs=241.1
Q ss_pred CeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCC
Q 040581 23 NSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSD 102 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~ 102 (394)
+...+||.+ ..+.+|+++|.||||||+++|++||||+++||+|..| .+..|.... .+++..+++
T Consensus 125 ~~~~~pL~n-~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C--------------~s~~C~~~~-~ydps~SsT 188 (451)
T 3qvc_A 125 EFDNVELKD-LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKC--------------TSESCESKN-HYDSSKSKT 188 (451)
T ss_dssp --CCCCGGG-GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTC--------------CSGGGTTSC-CBCGGGCTT
T ss_pred cCCccceee-cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC--------------CccccCCCC-CCCCCCCcc
Confidence 345678887 3578899999999999999999999999999999886 334565443 244444444
Q ss_pred CCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccC----ccccCCCCCcceeeecCCCCC---
Q 040581 103 TTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPT----FLLQGLARGARGMLGLGRAPI--- 175 (394)
Q Consensus 103 ~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~GIlGLg~~~~--- 175 (394)
+....|.|.+.|+ +|+ ++|.+++|+|++++. +++ +.|||++. ... ......+||||||++..
T Consensus 189 ~~~~~~~f~i~Yg-dGs-~~G~~~~Dtv~igg~-------~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~ 257 (451)
T 3qvc_A 189 YEKDDTPVKLTSK-AGT-ISGIFSKDLVTIGKL-------SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIG 257 (451)
T ss_dssp CEEEEEEEEEECS-SEE-EEEEEEEEEEEETTE-------EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSS
T ss_pred cccCCCEEEEEEC-CCE-EEEEEEEEEEEECCE-------EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCccccc
Confidence 5567899999998 665 999999999999986 778 99999987 321 11245799999998753
Q ss_pred ---chhhhhhcccCC-cceEEEeecCC---CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCC
Q 040581 176 ---SLPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEG 246 (394)
Q Consensus 176 ---s~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~ 246 (394)
+++.+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.++ |+|+++ .. . ..
T Consensus 258 ~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~-~~w~v~l~-I~Vgg~-~~-~-~~ 332 (451)
T 3qvc_A 258 SIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD-LMWQVDLD-VHFGNV-SS-K-KA 332 (451)
T ss_dssp CCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST-TSSEEEEE-EEETTE-EE-E-EE
T ss_pred CCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC-CeeEEEEE-EEECCc-cC-C-Cc
Confidence 577889998888 78999999986 79999999874 7899999999865 89999999 999998 22 1 35
Q ss_pred ceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCe
Q 040581 247 LTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNS 326 (394)
Q Consensus 247 ~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y 326 (394)
.++|||||+++++|++++++|.+++.+... .. ......+|. ...+|+|+|+|+| .+++|||++|
T Consensus 333 ~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~-------~~-~g~y~v~C~------~~~~P~itf~fgg--~~i~lp~~~y 396 (451)
T 3qvc_A 333 NVILDSATSVITVPTEFFNQFVESASVFKV-------PF-LSLYVTTCG------NTKLPTLEYRSPN--KVYTLEPKQY 396 (451)
T ss_dssp EEEECTTBSSEEECHHHHHHHHTTTTCEEC-------TT-SSCEEEETT------CTTCCCEEEEETT--EEEEECHHHH
T ss_pred eEEEeCCCccccCCHHHHHHHHHHcCCeec-------CC-CCeEEeeCC------cCcCCcEEEEECC--EEEEEcHHHh
Confidence 699999999999999999999887743211 00 011113454 2468999999997 9999999999
Q ss_pred EEEeCC--ceEEEE-EEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCC
Q 040581 327 MVKVNE--EVVCLG-FLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLR 377 (394)
Q Consensus 327 ~~~~~~--~~~C~~-~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~ 377 (394)
+++..+ +..|+. +...... .+.||||++|||++|+|||++++|||||+.+
T Consensus 397 i~~~~~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 397 LEPLENIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECTTTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eeecccCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 998652 457874 5544321 3579999999999999999999999999843
No 26
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.8e-52 Score=413.18 Aligned_cols=305 Identities=16% Similarity=0.212 Sum_probs=241.9
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDT 103 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~ 103 (394)
...+||.+ ..+++|+++|.||||||+++|++||||+++||+|..| .+..|...+ .+++.+++++
T Consensus 127 ~~~~~L~n-~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C--------------~~~~C~~~~-~ydps~SsT~ 190 (453)
T 2bju_A 127 NDNIELVD-FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC--------------TTAGCLTKH-LYDSSKSRTY 190 (453)
T ss_dssp SEEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC--------------CSTTGGGSC-CBCGGGCTTC
T ss_pred CCceeeEe-cCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCC--------------CccccCCCC-cCCCccCCce
Confidence 46689986 3678999999999999999999999999999999986 233454432 2444444456
Q ss_pred CCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCcc--cc-CCCCCcceeeecCCCCC-----
Q 040581 104 TTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFL--LQ-GLARGARGMLGLGRAPI----- 175 (394)
Q Consensus 104 ~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~--~~-~~~~~~~GIlGLg~~~~----- 175 (394)
....|.|.+.|+ +|+ ++|.+++|+|++++. +++ +.|||++... .. ......+||||||++..
T Consensus 191 ~~~~~~~~i~Yg-dGs-~~G~~~~Dtv~ig~~-------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~ 260 (453)
T 2bju_A 191 EKDGTKVEMNYV-SGT-VSGFFSKDLVTVGNL-------SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSV 260 (453)
T ss_dssp EEEEEEEEEECS-SSE-EEEEEEEEEEEETTE-------EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCC
T ss_pred eECCcEEEEEcC-CCC-eEEEEEEEEEEEeCc-------EEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCC
Confidence 667899999998 666 899999999999986 788 9999998762 11 01246899999998754
Q ss_pred -chhhhhhcccCC-cceEEEeecCC---CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCce
Q 040581 176 -SLPSQLATGIGH-QRKFFMCLSSS---NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLT 248 (394)
Q Consensus 176 -s~~~ql~~~~~i-~~~Fs~~L~~~---~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~ 248 (394)
++..+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.++ |+|+++.+ . ...+
T Consensus 261 ~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~-~~w~V~l~-I~Vgg~~~--~-~~~a 335 (453)
T 2bju_A 261 DPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD-LYWQITLD-AHVGNIML--E-KANC 335 (453)
T ss_dssp CCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE-TTEEEEEE-EEETTEEE--E-EEEE
T ss_pred CcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC-ceEEEEEE-EEECcEEe--c-cccE
Confidence 456788888877 69999999985 99999999874 7899999999865 89999999 99999432 3 4579
Q ss_pred EEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEE
Q 040581 249 KLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMV 328 (394)
Q Consensus 249 iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~ 328 (394)
||||||+++++|+++|++|++++.+. +...+.....+|+. ..+|+|+|+|+| ++++|||++|++
T Consensus 336 IiDSGTsl~~lP~~~~~~l~~~i~~~--------~~~~g~~~~v~C~~------~~~P~itf~fgg--~~~~l~~~~yi~ 399 (453)
T 2bju_A 336 IVDSGTSAITVPTDFLNKMLQNLDVI--------KVPFLPFYVTLCNN------SKLPTFEFTSEN--GKYTLEPEYYLQ 399 (453)
T ss_dssp EECTTCCSEEECHHHHHHHTTTSSCE--------ECTTSSCEEEETTC------TTCCCEEEECSS--CEEEECHHHHEE
T ss_pred EEcCCCCeEecCHHHHHHHHHHhCCc--------ccCCCceEEEecCC------CCCCcEEEEECC--EEEEECHHHhEe
Confidence 99999999999999999998776432 11111012245764 358999999987 999999999999
Q ss_pred EeCC--ceEEE-EEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeC
Q 040581 329 KVNE--EVVCL-GFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTL 376 (394)
Q Consensus 329 ~~~~--~~~C~-~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~ 376 (394)
+... +..|+ ++..... ..+.||||++|||++|+|||++++|||||+.
T Consensus 400 ~~~~~g~~~C~~~~~~~~~-~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~ 449 (453)
T 2bju_A 400 HIEDVGPGLCMLNIIGLDF-PVPTFILGDPFMRKYFTVFDYDNHSVGIALA 449 (453)
T ss_dssp ECTTTSTTEEEECEEECCC-SSCEEEECHHHHHHEEEEEETTTTEEEEEEE
T ss_pred ecccCCCceEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEEEc
Confidence 8753 45898 5665542 1348999999999999999999999999973
No 27
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.2e-51 Score=395.28 Aligned_cols=295 Identities=16% Similarity=0.171 Sum_probs=228.5
Q ss_pred CCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCceeeEE
Q 040581 34 STLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNTCGVFTQ 113 (394)
Q Consensus 34 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (394)
.+.+|+++|.|| ||+++|+|||||+++||+|..| .+..|..+. .+++.+++ +..+.|.|.+.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C--------------~~~~c~~~~-~y~~~~Ss-~~~~~~~~~i~ 74 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQT--------------PSSERSGHD-YYTPGSSA-QKIDGATWSIS 74 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTS--------------CHHHHTTCC-CBCCCTTC-EEEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCC--------------CcccccCCC-CCCccccC-CccCCCeEEEE
Confidence 467899999999 8999999999999999999987 112343322 23444333 33357899999
Q ss_pred eCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCC-CCCcceeeecCCCCCc---------hhhhhhc
Q 040581 114 NGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGL-ARGARGMLGLGRAPIS---------LPSQLAT 183 (394)
Q Consensus 114 Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql~~ 183 (394)
|+ +|+.++|.+++|+|+|++. +++++.|||++....... ....+||||||++..+ +..+|.+
T Consensus 75 Yg-~Gs~~~G~~~~D~v~ig~~-------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~ 146 (323)
T 1izd_A 75 YG-DGSSASGDVYKDKVTVGGV-------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKS 146 (323)
T ss_dssp CT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred cC-CCCeEEEEEEEEEEEECCE-------EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHH
Confidence 98 8888999999999999986 788999999987521111 1467999999987544 4567766
Q ss_pred ccCCcceEEEeecCC-CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccCceeeec
Q 040581 184 GIGHQRKFFMCLSSS-NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATME 260 (394)
Q Consensus 184 ~~~i~~~Fs~~L~~~-~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp 260 (394)
+ ..+++||+||.++ +|.|+|||+|. +.|++.|+|+...+.+|.|.+++|+|++ .+... ...+||||||+++++|
T Consensus 147 ~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~-~~~aiiDSGTs~~~lp 223 (323)
T 1izd_A 147 S-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSD-SITGIADTGTTLLLLD 223 (323)
T ss_dssp G-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEECC-CEEEEECTTCCSEEEC
T ss_pred h-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cccCC-CceEEEeCCCcceeCC
Confidence 5 3368999999987 99999999864 6899999999855589999999999999 54322 4569999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeCCceEEEE-E
Q 040581 261 SSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLG-F 339 (394)
Q Consensus 261 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~~-~ 339 (394)
++++++|.+++.+.. +....+. ...+|+ ..+|+|+|+|+| ++++||+++|++...++..|++ +
T Consensus 224 ~~~~~~i~~~i~ga~------~~~~~g~-~~~~C~-------~~~P~i~f~fgg--~~~~i~~~~~~~~~~~~~~C~~~i 287 (323)
T 1izd_A 224 DSIVDAYYEQVNGAS------YDSSQGG-YVFPSS-------ASLPDFSVTIGD--YTATVPGEYISFADVGNGQTFGGI 287 (323)
T ss_dssp HHHHHHHHTTSTTCE------EETTTTE-EEEETT-------CCCCCEEEEETT--EEEEECHHHHEEEECSTTEEEESE
T ss_pred HHHHHHHHHhCCCcE------EcCcCCE-EEEECC-------CCCceEEEEECC--EEEecCHHHeEEecCCCCeEEEEE
Confidence 999999987763221 1111111 112465 248999999976 9999999999987655568987 5
Q ss_pred EeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 340 LDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 340 ~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
..... .+.||||++|||++|+|||++++|||||+
T Consensus 288 ~~~~~--~~~~IlG~~fl~~~y~vfD~~~~riGfA~ 321 (323)
T 1izd_A 288 QSNSG--IGFSIFGDVFLKSQYVVFDASGPRLGFAA 321 (323)
T ss_dssp EECTT--TSSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred EcCCC--CCcEEEChHHhcCEEEEEECCCCEEEEee
Confidence 54432 35799999999999999999999999996
No 28
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.2e-51 Score=410.32 Aligned_cols=325 Identities=18% Similarity=0.203 Sum_probs=243.1
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDT 103 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~ 103 (394)
...+||.+. .+++|+++|.||||||+++|+|||||+++||+|..|. .+..|..+. .+++..++++
T Consensus 41 ~~~~~l~n~-~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~-------------~~~~C~~~~-~y~~~~SsT~ 105 (478)
T 1qdm_A 41 GDIVALKNY-MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCY-------------FSIACYLHS-RYKAGASSTY 105 (478)
T ss_dssp SCSGGGCCG-GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCC-------------SCGGGGGSC-CBCGGGCTTC
T ss_pred CceEEeEec-cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCC-------------CCccccCCC-CCCcccCCCe
Confidence 455788773 5689999999999999999999999999999999861 123465433 2444444556
Q ss_pred CCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCcccc-CCCCCcceeeecCCCCCch-----
Q 040581 104 TTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPISL----- 177 (394)
Q Consensus 104 ~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s~----- 177 (394)
..+.|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++..... .....++||||||++..+.
T Consensus 106 ~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~-------~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p 176 (478)
T 1qdm_A 106 KKNGKPAAIQYG-TGS-IAGYFSEDSVTVGDL-------VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVP 176 (478)
T ss_dssp BCCCCEEEEEET-TEE-EEEEEEEEEEEETTE-------EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCC
T ss_pred eeCCcEEEEEcC-CCC-eEEEEEEEEEEECCe-------EECCEEEEEEEecCCcccccccccceecccccccccCCCCc
Confidence 667899999998 654 899999999999986 7889999999875211 1124679999999987653
Q ss_pred -hhhhhcccCC-cceEEEeecCC-----CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEe-cCCc
Q 040581 178 -PSQLATGIGH-QRKFFMCLSSS-----NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVT-IEGL 247 (394)
Q Consensus 178 -~~ql~~~~~i-~~~Fs~~L~~~-----~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~-~~~~ 247 (394)
..+|.+++.+ +++||+||.+. +|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+.+. -...
T Consensus 177 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~-~~w~v~l~~i~v~g~~~~~~~~~~~ 255 (478)
T 1qdm_A 177 VWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK-GYWQFDMGDVLVGGKSTGFCAGGCA 255 (478)
T ss_dssp HHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE-TTEEEEECCEEETTEECSTTTTCEE
T ss_pred HHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC-CeEEEEEeEEEECCEEEeecCCCce
Confidence 4577788777 68999999874 89999999864 6899999999865 89999999999999876532 1346
Q ss_pred eEEeccCceeeechHHHHHHHHHHHHHH------------------HhcccCcee------------------------c
Q 040581 248 TKLSTIVPYATMESSIYATFAKAFTKAA------------------AAASRDMSV------------------------V 285 (394)
Q Consensus 248 ~iiDTGTt~~~lp~~~~~~l~~~i~~~~------------------~~~~~~~~~------------------------~ 285 (394)
+||||||+++++|+++|++|.++|.+.. ..+-.++++ +
T Consensus 256 aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v 335 (478)
T 1qdm_A 256 AIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSV 335 (478)
T ss_dssp EEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------
T ss_pred EEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccc
Confidence 9999999999999999999999885320 000000000 0
Q ss_pred -CC-----CC---------------------------------CCCceecccCC---------CCCCCCeEEEEEcCcce
Q 040581 286 -AP-----VA---------------------------------PFSLCFSSKGF---------NGSAVPVIDFVLQSEMV 317 (394)
Q Consensus 286 -~~-----~~---------------------------------~~~~C~~~~~~---------~~~~~P~i~f~f~g~~~ 317 (394)
+. .. ....|+..+.. ....+|+|+|+|+| +
T Consensus 336 ~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~gg--~ 413 (478)
T 1qdm_A 336 VDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGG--K 413 (478)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEETT--E
T ss_pred ccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEEEECC--E
Confidence 00 00 00123322211 12468999999987 9
Q ss_pred EEEEccCCeEEEeCC--ceEEEE-EEeCCC--CCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 318 KWRFYGSNSMVKVNE--EVVCLG-FLDGGS--DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 318 ~~~i~~~~y~~~~~~--~~~C~~-~~~~~~--~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
.|+|+|++|++...+ +..|++ +..... ...+.||||+.|||++|+|||++++|||||+
T Consensus 414 ~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~ 476 (478)
T 1qdm_A 414 KFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAK 476 (478)
T ss_dssp EEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred EEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEe
Confidence 999999999998754 358985 554321 1246899999999999999999999999996
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.4e-51 Score=399.24 Aligned_cols=316 Identities=17% Similarity=0.237 Sum_probs=237.0
Q ss_pred eeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCC
Q 040581 28 PVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNT 107 (394)
Q Consensus 28 pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~~ 107 (394)
||+++ .+..|+++|.||||||+++|+|||||+++||+|.+|+. |.. .+++.+++++....
T Consensus 6 ~l~~~-~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~----------------~~~---~f~~~~SsT~~~~~ 65 (383)
T 2ewy_A 6 NLQGD-SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSY----------------IDT---YFDTERSSTYRSKG 65 (383)
T ss_dssp CEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTT----------------BSC---CCCGGGCTTCEEEE
T ss_pred eccCC-CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCc----------------ccc---CcccccCccceeCC
Confidence 55663 45689999999999999999999999999999998721 110 11222222233446
Q ss_pred ceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCC---CCCcceeeecCCCCCc--------
Q 040581 108 CGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGL---ARGARGMLGLGRAPIS-------- 176 (394)
Q Consensus 108 ~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~---~~~~~GIlGLg~~~~s-------- 176 (394)
|.|.+.|+ +|+ ++|.+++|+|+|++... ..+ .+.|++.... .+. ....+||||||++..+
T Consensus 66 ~~~~i~Yg-~Gs-~~G~~~~Dtv~i~~~~~----~~~-~~~~~~~~~~--~~~~~~~~~~dGilGLg~~~~s~~~~~~~~ 136 (383)
T 2ewy_A 66 FDVTVKYT-QGS-WTGFVGEDLVTIPKGFN----TSF-LVNIATIFES--ENFFLPGIKWNGILGLAYATLAKPSSSLET 136 (383)
T ss_dssp EEEEEECS-SCE-EEEEEEEEEEEETTTEE----EEE-EEEEEEEEEE--ESCSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred ceEEEEEC-CcE-EEEEEEEEEEEECCCcc----cee-EEEEEEEEee--cceeeccCcCceEEecCchhcccccccccC
Confidence 88999998 665 69999999999986420 121 3567876543 221 1467999999987643
Q ss_pred hhhhhhcccCCcceEEEeecC----------CCCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEe-
Q 040581 177 LPSQLATGIGHQRKFFMCLSS----------SNGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVT- 243 (394)
Q Consensus 177 ~~~ql~~~~~i~~~Fs~~L~~----------~~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~- 243 (394)
+..+|.+++.++++||+||.+ .+|.|+|||++. +.|++.|+|+... .+|.|.|++|+|+++.+.++
T Consensus 137 ~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~~~~~~~ 215 (383)
T 2ewy_A 137 FFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE-WYYQIEILKLEIGGQSLNLDC 215 (383)
T ss_dssp HHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB-TTBBCCEEEEEETTEECCCCT
T ss_pred HHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC-ceEEEEEEEEEECCEEccccc
Confidence 455788777777899999852 189999999864 8999999999876 89999999999999987653
Q ss_pred --c-CCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCC---CCCCCceecccCCCCCCCCeEEEEEcCc--
Q 040581 244 --I-EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAP---VAPFSLCFSSKGFNGSAVPVIDFVLQSE-- 315 (394)
Q Consensus 244 --~-~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~f~f~g~-- 315 (394)
+ ...+||||||++++||+++|++|++++.+... .++... ......|+.........+|+|+|+|+++
T Consensus 216 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~ 290 (383)
T 2ewy_A 216 REYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASL-----IPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENS 290 (383)
T ss_dssp TTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC-----SSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSST
T ss_pred cccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcc-----cccCccccccccccccccCCcccHhhCCcEEEEECCCCC
Confidence 1 35799999999999999999999999987643 111110 0123579876543334689999999983
Q ss_pred --ceEEEEccCCeEEEeC---CceEEEEE-EeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCCCC
Q 040581 316 --MVKWRFYGSNSMVKVN---EEVVCLGF-LDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDF 384 (394)
Q Consensus 316 --~~~~~i~~~~y~~~~~---~~~~C~~~-~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~~~ 384 (394)
.++++|+|++|+++.. .+..|+++ +... .+.||||++|||++|+|||++++||||| ++.|...
T Consensus 291 ~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA---~~~c~~~ 359 (383)
T 2ewy_A 291 SRSFRITILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFDRAQKRVGFA---ASPCAEI 359 (383)
T ss_dssp TEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEE---ECTTCBS
T ss_pred CceEEEEEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEECCCCeEEEE---eccCCCc
Confidence 2589999999999864 24689864 2222 2369999999999999999999999999 5678753
No 30
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.8e-51 Score=393.98 Aligned_cols=301 Identities=18% Similarity=0.185 Sum_probs=229.3
Q ss_pred eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCC
Q 040581 24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDT 103 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~ 103 (394)
+...|+. .+.+|+++|.|| ||+++|+|||||+++||+|..|. +..|..+. .+++.+++ .
T Consensus 6 v~~~~~~---~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--------------~~~c~~~~-~y~~~~Ss-~ 64 (323)
T 1bxo_A 6 ATNTPTA---NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP--------------ASQQSGHS-VYNPSATG-K 64 (323)
T ss_dssp EEEEECG---GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--------------HHHHTTSC-CBCHHHHC-E
T ss_pred eeeeecC---CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC--------------chhccCCC-CCCcccCC-c
Confidence 3445544 467899999999 89999999999999999999871 12243322 12332222 2
Q ss_pred CCCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCC-CCCcceeeecCCCCCc------
Q 040581 104 TTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGL-ARGARGMLGLGRAPIS------ 176 (394)
Q Consensus 104 ~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s------ 176 (394)
..+.|.|.+.|+ +|+.++|.+++|+|++++. +++++.|||++....... ....+||||||++..+
T Consensus 65 ~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~ig~~-------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 136 (323)
T 1bxo_A 65 ELSGYTWSISYG-DGSSASGNVFTDSVTVGGV-------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQS 136 (323)
T ss_dssp EEEEEEEEEECT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSC
T ss_pred ccCCCeEEEEeC-CCCeEEEEEEEEEEEECCE-------EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCC
Confidence 235789999998 8888999999999999986 788999999987521111 1467999999986543
Q ss_pred ---hhhhhhcccCCcceEEEeecCC-CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEE
Q 040581 177 ---LPSQLATGIGHQRKFFMCLSSS-NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKL 250 (394)
Q Consensus 177 ---~~~ql~~~~~i~~~Fs~~L~~~-~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~ii 250 (394)
+..+|.++ ..+++||+||.++ .|.|+|||+|. +.|++.|+|+...+.+|.|.|++|+|++ ... . ...+||
T Consensus 137 ~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~-~-~~~aii 212 (323)
T 1bxo_A 137 QTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QSG-D-GFSGIA 212 (323)
T ss_dssp CCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EEE-E-EEEEEE
T ss_pred CCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-ccC-C-CceEEE
Confidence 45677665 3368999999986 99999999874 7999999999855589999999999999 322 2 356999
Q ss_pred eccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEe
Q 040581 251 STIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKV 330 (394)
Q Consensus 251 DTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~ 330 (394)
||||+++++|++++++|++++.+.. +....+. ...+|+ ..+|+|+|+|+| ++++||+++|++..
T Consensus 213 DSGTs~~~lP~~~~~~l~~~i~~a~------~~~~~g~-~~~~C~-------~~~P~i~f~fgg--~~~~l~~~~~~~~~ 276 (323)
T 1bxo_A 213 DTGTTLLLLDDSVVSQYYSQVSGAQ------QDSNAGG-YVFDCS-------TNLPDFSVSISG--YTATVPGSLINYGP 276 (323)
T ss_dssp CTTCSSEEECHHHHHHHHTTSTTCE------EETTTTE-EEECTT-------CCCCCEEEEETT--EEEEECHHHHEEEE
T ss_pred eCCCCceeCCHHHHHHHHHhCCCce------EcCcCCE-EEEECC-------CCCceEEEEECC--EEEEECHHHeEEec
Confidence 9999999999999999988763221 1111111 113465 248999999976 99999999999876
Q ss_pred CC-ceEEEE-EEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 331 NE-EVVCLG-FLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 331 ~~-~~~C~~-~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
.+ +..|++ +..... .+.||||++|||++|+|||++++|||||+
T Consensus 277 ~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~ 321 (323)
T 1bxo_A 277 SGDGSTCLGGIQSNSG--IGFSIFGDIFLKSQYVVFDSDGPQLGFAP 321 (323)
T ss_dssp CSSSSCEEESEEECTT--CSSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred cCCCCeEEEEEECCCC--CCcEEEChHHHcCEEEEEECCCCEEEEec
Confidence 43 368987 444432 35799999999999999999999999996
No 31
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.1e-50 Score=400.13 Aligned_cols=314 Identities=18% Similarity=0.211 Sum_probs=236.9
Q ss_pred CCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCceeeEE
Q 040581 34 STLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNTCGVFTQ 113 (394)
Q Consensus 34 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (394)
....|+++|.||||||+++|+|||||+++||+|.+||. ... .+++.+++++....|.|.+.
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~--~~~-----------------~y~~~~SsT~~~~~~~~~i~ 86 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF--LHR-----------------YYQRQLSSTYRDLRKGVYVP 86 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT--CSC-----------------CCCGGGCTTCEEEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCCCc--ccC-----------------CcCcccCcccccCCCEEEEE
Confidence 34689999999999999999999999999999998742 000 12222222234446889999
Q ss_pred eCCCCceEeeEEEEEEEEecccCCCCcceecc-cEEEecccCccccC-CCCCcceeeecCCCCC--------chhhhhhc
Q 040581 114 NGISGLVTTGDLAEDTIAVRSELEDPSITAVD-QFLFSCAPTFLLQG-LARGARGMLGLGRAPI--------SLPSQLAT 183 (394)
Q Consensus 114 Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~-~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~~~ql~~ 183 (394)
|+ +|+ ++|.+++|+|+|++.. .+. .+.|+++....... .....+||||||++.. +++.+|.+
T Consensus 87 Yg-~Gs-~~G~~~~D~v~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 158 (402)
T 3vf3_A 87 YT-QGK-WEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 158 (402)
T ss_dssp CS-SCE-EEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EC-cEE-EEEEEEEEEEEECCcc------ccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHH
Confidence 98 655 6999999999998531 222 24577766542111 1246799999998653 46678988
Q ss_pred ccCCcceEEEeecC------------C-CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEe---c-
Q 040581 184 GIGHQRKFFMCLSS------------S-NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVT---I- 244 (394)
Q Consensus 184 ~~~i~~~Fs~~L~~------------~-~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~---~- 244 (394)
++.++++||+||.+ . .|.|+|||++. +.|++.|+|+... .+|.|.+++|+|+++.+.++ +
T Consensus 159 q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~g~~~~~~~~~~~ 237 (402)
T 3vf3_A 159 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRVEINGQDLKMDCKEYN 237 (402)
T ss_dssp HSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB-TTBEECEEEEEETTEECCCCGGGGG
T ss_pred ccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC-cEEEEEEeEEEECCEEecccccccC
Confidence 88888899999963 2 89999999864 7899999999875 89999999999999988653 1
Q ss_pred CCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCC---CCCCCceecccCCCCCCCCeEEEEEcCc----ce
Q 040581 245 EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAP---VAPFSLCFSSKGFNGSAVPVIDFVLQSE----MV 317 (394)
Q Consensus 245 ~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~f~f~g~----~~ 317 (394)
...+||||||++++||++++++|++++.+... ..+... ......|+......+..+|+|+|+|++. .+
T Consensus 238 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-----~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~ 312 (402)
T 3vf3_A 238 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-----TEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSF 312 (402)
T ss_dssp SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-----TSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEE
T ss_pred CCeEEEECCCCcccCCHHHHHHHHHHHhhhcc-----ccccCccccccccccccccccchHhhCCceEEEEecCCCCceE
Confidence 45799999999999999999999999988753 111111 1224689987654445699999999983 13
Q ss_pred EEEEccCCeEEEeCCc----eEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCCCCC
Q 040581 318 KWRFYGSNSMVKVNEE----VVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFS 385 (394)
Q Consensus 318 ~~~i~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~~~~ 385 (394)
+++|+|++|+++..+. ..|+++..... .+.||||++|||++|+|||++++||||| ++.|+..+
T Consensus 313 ~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~--~~~~ILG~~fl~~~yvvfD~~~~rIGfA---~~~c~~~~ 379 (402)
T 3vf3_A 313 RITILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARKRIGFA---VSACHVHD 379 (402)
T ss_dssp EEEECHHHHEEECCCGGGTTEEEEEECEEEE--SSCEEECHHHHTTEEEEEEGGGTEEEEE---EETTCCBC
T ss_pred EEEECHHHheehhccCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCCCEEEEE---ecccCccc
Confidence 6999999999986542 48986322111 2469999999999999999999999999 67788643
No 32
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.6e-50 Score=396.42 Aligned_cols=316 Identities=17% Similarity=0.212 Sum_probs=236.8
Q ss_pred eeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCC
Q 040581 28 PVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNT 107 (394)
Q Consensus 28 pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~~ 107 (394)
+|+.+ .+..|+++|.||||||+++|+|||||+++||+|.+|+. |+. .+++.+++++....
T Consensus 14 ~l~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~----------------~~~---~y~~~~SsT~~~~~ 73 (395)
T 2qp8_A 14 NLRGK-SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF----------------LHR---YYQRQLSSTYRDLR 73 (395)
T ss_dssp CEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT----------------CSC---CCCGGGCTTCEEEE
T ss_pred ecCCC-CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcc----------------ccC---CcCcccCCCceeCC
Confidence 34442 45689999999999999999999999999999998731 110 11222222233446
Q ss_pred ceeeEEeCCCCceEeeEEEEEEEEecc-cCCCCcceecccEEEecccCccccC-CCCCcceeeecCCCCC--------ch
Q 040581 108 CGVFTQNGISGLVTTGDLAEDTIAVRS-ELEDPSITAVDQFLFSCAPTFLLQG-LARGARGMLGLGRAPI--------SL 177 (394)
Q Consensus 108 ~~~~~~Y~~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~ 177 (394)
|.|.+.|+ +|+ ++|.+++|+|+|++ .+ +.+ .+.|++........ .....+||||||++.. ++
T Consensus 74 ~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~g~~-----~~~-~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~ 145 (395)
T 2qp8_A 74 KGVYVPYT-QGK-WEGELGTDLVSIPHGPN-----VTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPF 145 (395)
T ss_dssp EEEEEECS-SCE-EEEEEEEEEEECTTSCS-----CEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred ceEEEEEC-CcE-EEEEEEeEEEEECCCCC-----ceE-EEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCH
Confidence 88999998 665 59999999999984 32 122 25677765431111 1246799999998754 35
Q ss_pred hhhhhcccCCcceEEEeecC-------------CCCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEE
Q 040581 178 PSQLATGIGHQRKFFMCLSS-------------SNGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSV 242 (394)
Q Consensus 178 ~~ql~~~~~i~~~Fs~~L~~-------------~~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~ 242 (394)
..+|.+++.++++||+||.+ .+|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+.+
T Consensus 146 ~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~~~~~ 224 (395)
T 2qp8_A 146 FDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRVEINGQDLKM 224 (395)
T ss_dssp HHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEEEEEETTEECCC
T ss_pred HHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC-ceEEEEEEEEEECCEEccc
Confidence 56888888888899999964 389999999864 7899999999875 8999999999999998764
Q ss_pred e---c-CCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecC-C--CCCCCceecccCCCCCCCCeEEEEEcCc
Q 040581 243 T---I-EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVA-P--VAPFSLCFSSKGFNGSAVPVIDFVLQSE 315 (394)
Q Consensus 243 ~---~-~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~-~--~~~~~~C~~~~~~~~~~~P~i~f~f~g~ 315 (394)
+ + ...+||||||++++||+++|++|++++.+... ..... . ......|+.........+|+|+|+|+|+
T Consensus 225 ~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~ 299 (395)
T 2qp8_A 225 DCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-----TEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGE 299 (395)
T ss_dssp CGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-----TSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECS
T ss_pred CccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcc-----cccCCccccccccccccccccchHhhCCcEEEEEccC
Confidence 3 1 35799999999999999999999999987753 11111 0 1123579876544445699999999983
Q ss_pred c----eEEEEccCCeEEEeCC----ceEEEE--EEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCCCC
Q 040581 316 M----VKWRFYGSNSMVKVNE----EVVCLG--FLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDF 384 (394)
Q Consensus 316 ~----~~~~i~~~~y~~~~~~----~~~C~~--~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~~~ 384 (394)
. ++++|+|++|+++..+ ...|++ +... .+.||||++|||++|+|||++++||||| ++.|.+.
T Consensus 300 ~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA---~~~c~~~ 371 (395)
T 2qp8_A 300 VTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGAVIMEGFYVVFDRARKRIGFA---VSACHVH 371 (395)
T ss_dssp STTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEE---EETTCCC
T ss_pred CCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEEChHHhCCeeEEEECCCCEEEEE---eccCCCC
Confidence 1 3799999999998643 248974 4332 2469999999999999999999999999 5678764
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.7e-50 Score=403.02 Aligned_cols=314 Identities=17% Similarity=0.213 Sum_probs=238.8
Q ss_pred CccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCceeeEEe
Q 040581 35 TLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNTCGVFTQN 114 (394)
Q Consensus 35 ~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~Y 114 (394)
+..|+++|.||||||+++|+|||||+++||+|.+||. ... .+++.+++++....|.|.+.|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~cc~--~~~-----------------~y~~~~SsT~~~~~~~~~i~Y 133 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF--LHR-----------------YYQRQLSSTYRDLRKGVYVPY 133 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT--CSC-----------------CCCGGGCTTCEEEEEEEEEEC
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccccc--cCC-----------------cccCCCCCCcccCCccEEEEe
Confidence 3479999999999999999999999999999998742 000 122222222334468899999
Q ss_pred CCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCC-CCCcceeeecCCCCC--------chhhhhhccc
Q 040581 115 GISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGL-ARGARGMLGLGRAPI--------SLPSQLATGI 185 (394)
Q Consensus 115 ~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~ql~~~~ 185 (394)
+ +|+ ++|.+++|+|+|++... +.+ .+.|+++........ ....+||||||++.. +++.+|.+++
T Consensus 134 g-~Gs-~~G~~~~Dtv~ig~~~~----~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~ 206 (455)
T 3lpj_A 134 T-QGK-WEGELGTDLVSIPHGPN----VTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT 206 (455)
T ss_dssp S-SCE-EEEEEEEEEEECTTSCS----CEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHS
T ss_pred C-CeE-EEEEEEEEEEEECCCcc----eee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHcc
Confidence 8 655 69999999999985310 132 356888766521111 246899999998654 4567888888
Q ss_pred CCcceEEEeecC-------------CCCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEe---c-CC
Q 040581 186 GHQRKFFMCLSS-------------SNGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVT---I-EG 246 (394)
Q Consensus 186 ~i~~~Fs~~L~~-------------~~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~---~-~~ 246 (394)
.++++||+||.+ ..|.|+|||+|. +.|++.|+|+... .+|.|.+++|+|+++.+.++ + ..
T Consensus 207 ~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~g~~~~~~~~~~~~~ 285 (455)
T 3lpj_A 207 HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRVEINGQDLKMDCKEYNYD 285 (455)
T ss_dssp CCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEEEEEETTEECCCCGGGGGSS
T ss_pred CCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC-ceeEEEEeEEEECCEEccccccccCCC
Confidence 888899999963 289999999864 7899999999875 89999999999999988653 1 45
Q ss_pred ceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCC---CCCCCceecccCCCCCCCCeEEEEEcCc----ceEE
Q 040581 247 LTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAP---VAPFSLCFSSKGFNGSAVPVIDFVLQSE----MVKW 319 (394)
Q Consensus 247 ~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~f~f~g~----~~~~ 319 (394)
.+||||||++++||++++++|+++|.+... ..+... ......|+......+..+|+|+|+|++. ..++
T Consensus 286 ~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-----~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 360 (455)
T 3lpj_A 286 KSIVDSGTTNLRLPKKVFEAAVKSIKAASS-----TEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 360 (455)
T ss_dssp CEEECTTSSSEEEEHHHHHHHHHHHHHHTT-----TSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred eEEEECCCcceeCCHHHHHHHHHHhhhhcc-----ccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEE
Confidence 799999999999999999999999988753 111111 1224689987654455699999999983 1369
Q ss_pred EEccCCeEEEeCCc----eEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCCCCC
Q 040581 320 RFYGSNSMVKVNEE----VVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFS 385 (394)
Q Consensus 320 ~i~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~~~~ 385 (394)
+|+|++|+++..+. ..|+++..... .+.||||++|||++|+|||++++||||| +++|....
T Consensus 361 ~l~~~~yi~~~~~~~~~~~~C~~f~~~~~--~~~~ILG~~fl~~~yvvfD~~~~rIGfA---~~~c~~~~ 425 (455)
T 3lpj_A 361 TILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARKRIGFA---VSACHVHD 425 (455)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEE--SSCEEECHHHHTTEEEEEETTTTEEEEE---EETTCCCC
T ss_pred EECHHHheEeccCCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCCCEEEEE---eccccccc
Confidence 99999999987542 48987422111 2469999999999999999999999999 67786654
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=6e-40 Score=300.66 Aligned_cols=222 Identities=16% Similarity=0.168 Sum_probs=178.6
Q ss_pred EEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q 040581 26 AIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTT 105 (394)
Q Consensus 26 ~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~~ 105 (394)
.+||.+ ..+.+|+++|.||||||+++|+|||||+++||+|..|. ....|..+. .+++.+++++..
T Consensus 4 ~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-------------~~~~C~~~~-~y~~~~SsT~~~ 68 (239)
T 1b5f_A 4 VVALTN-DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCI-------------NSKACRAHS-MYESSDSSTYKE 68 (239)
T ss_dssp EEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-------------SCHHHHTSC-CBCGGGCTTCEE
T ss_pred eeeeee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCC-------------CCcccCCCC-CCCCccCCCeee
Confidence 478887 46789999999999999999999999999999999871 023454432 234443444555
Q ss_pred CCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccc-cCCCCCcceeeecCCCCCc--hhhhhh
Q 040581 106 NTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLL-QGLARGARGMLGLGRAPIS--LPSQLA 182 (394)
Q Consensus 106 ~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~GIlGLg~~~~s--~~~ql~ 182 (394)
..|.+.+.|+ +|+ ++|.+++|+|++++. .++++.|||+..... .......+||||||+...+ +..+|.
T Consensus 69 ~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~-------~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~ 139 (239)
T 1b5f_A 69 NGTFGAIIYG-TGS-ITGFFSQDSVTIGDL-------VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNML 139 (239)
T ss_dssp EEEEEEEECS-SCE-EEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHH
T ss_pred CCcEEEEEEC-CCc-EEEEEEEEEEEECCc-------EEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHH
Confidence 6788999998 665 899999999999986 788999999886521 1123568999999998876 345677
Q ss_pred cccCC-cceEEEeecCC-----CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEe-cCCceEEecc
Q 040581 183 TGIGH-QRKFFMCLSSS-----NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVT-IEGLTKLSTI 253 (394)
Q Consensus 183 ~~~~i-~~~Fs~~L~~~-----~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~-~~~~~iiDTG 253 (394)
+++.+ +++||+||.+. .|.|+|||+|. +.|++.|+|+... .+|.|.|++|+|+++.+.+. ....+|||||
T Consensus 140 ~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTG 218 (239)
T 1b5f_A 140 NQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ-YYWQFGIGDVLIGDKSTGFCAPGCQAFADSG 218 (239)
T ss_dssp HTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE-TTEEEEECCEEETTEECCTTTTCEEEEECTT
T ss_pred HCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC-CeEEEEeeEEEECCEEecccCCCCEEEEecC
Confidence 77776 68999999873 89999999864 7899999999865 89999999999999876532 1346999999
Q ss_pred CceeeechHHHHHHHHHHH
Q 040581 254 VPYATMESSIYATFAKAFT 272 (394)
Q Consensus 254 Tt~~~lp~~~~~~l~~~i~ 272 (394)
|++++||+++|++|+++|.
T Consensus 219 Tt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 219 TSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp CSSEEECHHHHHHHHHHTT
T ss_pred cchhhCCHHHHHHHHHHhC
Confidence 9999999999999998875
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=3.1e-36 Score=276.51 Aligned_cols=217 Identities=18% Similarity=0.194 Sum_probs=170.9
Q ss_pred eecccEEEecccCcccc-CCCCCcceeeecCCCCCc------hhhhhhcccCC-cceEEEeecCC-----CCeEEEcCCC
Q 040581 142 TAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPIS------LPSQLATGIGH-QRKFFMCLSSS-----NGVVLSHHTS 208 (394)
Q Consensus 142 ~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------~~~ql~~~~~i-~~~Fs~~L~~~-----~G~l~fGg~~ 208 (394)
++++++.|||++..... ......+||||||++..+ +..+|.+++.+ +++||+||.+. +|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 47889999999876321 123478999999987643 56788888877 79999999886 7999999986
Q ss_pred C--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecC
Q 040581 209 T--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVA 286 (394)
Q Consensus 209 ~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~ 286 (394)
. +.|++.|+|+... .+|.|.+++|+|+++.+.......+|+||||+++++|++++++|.+++.+.. . ..
T Consensus 83 ~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~-------~-~~ 153 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRK-AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP-------L-IQ 153 (241)
T ss_dssp GGGEEEEEEEEECSSB-TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-------E-ET
T ss_pred HHHcCCceEEEECccc-cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCee-------c-cC
Confidence 4 7899999999865 8999999999999986422113469999999999999999999998874321 1 11
Q ss_pred CCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEeCC--ceEEEE-EEeCCC--CCCCeeEECccceeeeE
Q 040581 287 PVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNE--EVVCLG-FLDGGS--DLTSSIVLGGFQLEDNV 361 (394)
Q Consensus 287 ~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~--~~~~~~ilG~~flr~~y 361 (394)
+ ....+|+... .+|+|+|+|+| ++++|||++|+++..+ +..|+. +..... ...+.||||++|||++|
T Consensus 154 g-~~~~~C~~~~-----~~p~i~f~f~g--~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y 225 (241)
T 1lya_B 154 G-EYMIPCEKVS-----TLPAITLKLGG--KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYY 225 (241)
T ss_dssp T-EEEEEGGGGG-----GSCCEEEEETT--EEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEE
T ss_pred C-cEEEECCCCc-----cCCeEEEEECC--EEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceE
Confidence 1 1123676542 48999999976 9999999999998753 468985 665431 12457999999999999
Q ss_pred EEEeCCCCeEEEEe
Q 040581 362 MDFDLGTSMLGFST 375 (394)
Q Consensus 362 vvFD~~~~rIGfa~ 375 (394)
+|||++++|||||+
T Consensus 226 ~vfD~~~~~igfA~ 239 (241)
T 1lya_B 226 TVFDRDNNRVGFAE 239 (241)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCEEEEEE
Confidence 99999999999996
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.80 E-value=1.1e-19 Score=141.73 Aligned_cols=94 Identities=22% Similarity=0.267 Sum_probs=73.5
Q ss_pred EEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q 040581 25 VAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTT 104 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~ 104 (394)
+.+||.+ ..+.+|+++|.||||||+++|+|||||+++||+|..|. + ....|..+. .+++.+++++.
T Consensus 3 ~~~~l~n-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~----~--------~~~~C~~~~-~y~p~~SsT~~ 68 (97)
T 1lya_A 3 IPEVLKN-YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCK----L--------LDIACWIHH-KYNSDKSSTYV 68 (97)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC----T--------TCHHHHTSC-CBCGGGCTTCE
T ss_pred ceEeeEE-CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCcc----C--------cccccCCCC-CCCchhCCCce
Confidence 4588886 36789999999999999999999999999999999861 0 013565432 24444444455
Q ss_pred CCCceeeEEeCCCCceEeeEEEEEEEEecc
Q 040581 105 TNTCGVFTQNGISGLVTTGDLAEDTIAVRS 134 (394)
Q Consensus 105 ~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~ 134 (394)
...|.|.+.|+ +|+ ++|.+++|+|.|++
T Consensus 69 ~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 69 KNGTSFDIHYG-SGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEECS-SCE-EEEEEEEEEEEESC
T ss_pred eCCCcEEEEEC-CcE-EEEEEEEEEEEECC
Confidence 66799999998 766 89999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.59 E-value=1.1e-15 Score=116.74 Aligned_cols=70 Identities=21% Similarity=0.427 Sum_probs=58.3
Q ss_pred CCCeEEEEEcCcceEEEEccCCeEEEeCC--ceEEEE-EEeCCC-CCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581 304 AVPVIDFVLQSEMVKWRFYGSNSMVKVNE--EVVCLG-FLDGGS-DLTSSIVLGGFQLEDNVMDFDLGTSMLGFST 375 (394)
Q Consensus 304 ~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~-~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~ 375 (394)
.+|+|+|+|+| ++++|+|++|++.... +..|++ +..... ...+.||||++|||++|+|||++++|||||+
T Consensus 12 ~~P~i~f~~gg--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~ 85 (87)
T 1b5f_B 12 SMPNVSFTIGG--KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAE 85 (87)
T ss_dssp GCCCEEEEETT--EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred cCCcEEEEECC--EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEE
Confidence 48999999987 9999999999998653 368985 555321 1245899999999999999999999999996
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.18 Score=41.16 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=23.7
Q ss_pred eEECccceeeeEEEEeCCCCeEEEE
Q 040581 350 IVLGGFQLEDNVMDFDLGTSMLGFS 374 (394)
Q Consensus 350 ~ilG~~flr~~yvvFD~~~~rIGfa 374 (394)
.|||..||+++-+..|..++++-|.
T Consensus 110 ~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 110 VLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEEET
T ss_pred eEecHHHHhhCCEEEECCCCEEEEc
Confidence 6999999999999999999999985
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.45 E-value=0.71 Score=37.79 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=24.0
Q ss_pred eeEECccceeeeEEEEeCCCCeEEEE
Q 040581 349 SIVLGGFQLEDNVMDFDLGTSMLGFS 374 (394)
Q Consensus 349 ~~ilG~~flr~~yvvFD~~~~rIGfa 374 (394)
..+||..||+++-.+.|.+++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 37999999999999999999999886
No 40
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=87.90 E-value=0.74 Score=37.66 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=26.0
Q ss_pred CCccEEEEEeeCCCCCeEEEEEEcCCCceeee
Q 040581 34 STLQYVAKIHHGVSQVPINLVLDLGGPLTWVD 65 (394)
Q Consensus 34 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 65 (394)
....|++++.|.. +++++++|||++.+.+.
T Consensus 21 ~~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is 50 (148)
T 3s8i_A 21 QVTMLYINCKVNG--HPLKAFVDSGAQMTIMS 50 (148)
T ss_dssp -CCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccCEEEEEEEECC--EEEEEEEeCCCCcEeeC
Confidence 3457999999987 99999999999998885
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=79.43 E-value=1.6 Score=35.39 Aligned_cols=30 Identities=17% Similarity=0.214 Sum_probs=26.6
Q ss_pred CCccEEEEEeeCCCCCeEEEEEEcCCCceeee
Q 040581 34 STLQYVAKIHHGVSQVPINLVLDLGGPLTWVD 65 (394)
Q Consensus 34 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 65 (394)
..+.+++++.|+. +++++++|||++.+.+.
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccC
Confidence 4578999999988 89999999999988875
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=78.42 E-value=1.8 Score=32.99 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=23.4
Q ss_pred EEEEEeeCCCCCeEEEEEEcCCCceeee
Q 040581 38 YVAKIHHGVSQVPINLVLDLGGPLTWVD 65 (394)
Q Consensus 38 Y~~~i~iGtP~q~~~v~~DTGS~~~wv~ 65 (394)
-++.+.||. |.+.+++|||+.++-+.
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEc
Confidence 467899998 99999999999999986
No 43
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.20 E-value=2.2 Score=32.24 Aligned_cols=28 Identities=25% Similarity=0.190 Sum_probs=24.2
Q ss_pred EEEEeeCCCCCeEEEEEEcCCCceeeeCCC
Q 040581 39 VAKIHHGVSQVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 39 ~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~ 68 (394)
++.++||. |.+.+++|||..++-+...+
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCCS
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEeccc
Confidence 57799998 99999999999999996443
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=69.27 E-value=4.1 Score=30.67 Aligned_cols=28 Identities=21% Similarity=0.181 Sum_probs=24.1
Q ss_pred EEEEeeCCCCCeEEEEEEcCCCceeeeCCC
Q 040581 39 VAKIHHGVSQVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 39 ~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~ 68 (394)
++.++||. |.+.+++|||..++-+...+
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCcc
Confidence 57799998 99999999999999986443
No 45
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=69.23 E-value=3.7 Score=31.67 Aligned_cols=30 Identities=23% Similarity=0.248 Sum_probs=24.8
Q ss_pred EEEEeeC---CCCCeEEEEEEcCCCceeeeCCC
Q 040581 39 VAKIHHG---VSQVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 39 ~~~i~iG---tP~q~~~v~~DTGS~~~wv~~~~ 68 (394)
.+.++|| +|+|....++|||..++.+....
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~ 44 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIAL 44 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEeccc
Confidence 4566666 78899999999999999997554
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=64.22 E-value=5.4 Score=30.96 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=22.9
Q ss_pred EEEEEeeCCCCCeEEEEEEcCCCceeeeCC
Q 040581 38 YVAKIHHGVSQVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 38 Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~ 67 (394)
=++ ++||. |.+.+++|||..++-+.-.
T Consensus 15 P~v-ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEECC--EEEEEEecCCCCcEEEccc
Confidence 345 99998 9999999999999998643
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=57.32 E-value=9.5 Score=29.43 Aligned_cols=29 Identities=7% Similarity=0.058 Sum_probs=24.8
Q ss_pred EEEEEeeCCCCCeEEEEEEcCCCceeeeCCC
Q 040581 38 YVAKIHHGVSQVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 38 Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~ 68 (394)
=.+.+.||. |.+..++|||..++-+...+
T Consensus 10 P~vti~I~G--q~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 10 PSLTLWLDD--KMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred CeEEEEECC--EEEEEEEccCCCceEEeccc
Confidence 357799998 99999999999999987544
No 48
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=52.20 E-value=16 Score=27.04 Aligned_cols=37 Identities=16% Similarity=0.085 Sum_probs=24.9
Q ss_pred Eeccc-CCCceEEEEeEEEEc--CEEEEEecCCceEEeccCceeeechH
Q 040581 217 TPLIG-KSQDYFINVKSIKIN--GNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 217 tpl~~-~~~~y~v~l~~i~v~--~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
.||.. ....|.+ .|.|| .+.+. ++||||++.+.+|..
T Consensus 5 ~~l~n~~~~~Y~~---~i~iGTP~Q~~~------v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNYMDAQYYG---EIGIGTPPQCFT------VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEETTTEEEE---EEEETTTTEEEE------EEEETTCCCEEEEBT
T ss_pred EeeEECCCCeEEE---EEEECCCCeEEE------EEEeCCCCceEEeEc
Confidence 45542 1245554 58888 45443 899999999999864
No 49
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=48.98 E-value=14 Score=27.92 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=26.6
Q ss_pred eEEEEeEEEEcCEEEEEecCCceEEeccCceeeechHHHH
Q 040581 226 YFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYA 265 (394)
Q Consensus 226 y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~~~~~ 265 (394)
|.=.+..++|+|+.++ +++|||+-.+.+.++...
T Consensus 6 ~~RP~v~v~I~Gq~~e------~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN------VLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEEE------EEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEEE------EEeccCCCcEEEccccCc
Confidence 3334556999999665 899999999999977653
No 50
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=48.50 E-value=23 Score=32.46 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=31.4
Q ss_pred CeEEEeeeecCCCccEEEE---EeeCC---CCCeEEEEEEcCCCceeeeCC
Q 040581 23 NSVAIPVVKDVSTLQYVAK---IHHGV---SQVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~---i~iGt---P~q~~~v~~DTGS~~~wv~~~ 67 (394)
+...+|+.. ..+.|.++ |.||. +.+...+++|||++.+++|..
T Consensus 182 ~l~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 182 PVAYTPVDN--SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp CEEEEECBC--TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEccC--CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 445677754 34567766 67886 346789999999999999854
No 51
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=47.91 E-value=18 Score=28.67 Aligned_cols=32 Identities=13% Similarity=0.241 Sum_probs=26.5
Q ss_pred CccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCC
Q 040581 35 TLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 35 ~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~ 68 (394)
...-++.++|+. |+...++|||.+++-+....
T Consensus 20 ~~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 20 PPEPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CCSSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred cCCCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 345678899998 99999999999999996443
No 52
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=46.84 E-value=16 Score=27.38 Aligned_cols=30 Identities=23% Similarity=0.199 Sum_probs=24.3
Q ss_pred eEEEEeEEEEcCEEEEEecCCceEEeccCceeeech
Q 040581 226 YFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMES 261 (394)
Q Consensus 226 y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~ 261 (394)
|.=.+..++|+|+.++ +++|||+-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~e------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE------EEeccCCCcEEEec
Confidence 4445567999999776 89999999999874
No 53
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=43.53 E-value=21 Score=28.26 Aligned_cols=27 Identities=15% Similarity=0.294 Sum_probs=22.2
Q ss_pred EeEEEEcCEEEEEecCCceEEeccCceeeechH
Q 040581 230 VKSIKINGNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 230 l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
+..++|+|+.+. +++|||...+.|++.
T Consensus 24 ~v~i~I~G~~~~------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 24 RITLKVGGQPVT------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEEETTEEEE------EEECTTCSSCEECSC
T ss_pred EEEEEECCEEEE------EEEeCCCCeEEEccc
Confidence 345899998765 899999999999853
No 54
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=42.47 E-value=24 Score=32.29 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=30.5
Q ss_pred CeEEEeeeecCCCccEEEE---EeeCC--CCCeEEEEEEcCCCceeeeCC
Q 040581 23 NSVAIPVVKDVSTLQYVAK---IHHGV--SQVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~---i~iGt--P~q~~~v~~DTGS~~~wv~~~ 67 (394)
+...+|+.. ..+.|.++ |.||. +.....+++|||++.+++|..
T Consensus 182 ~l~~~p~~~--~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 182 SLTTVPIDN--SRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp CCEEEECBC--TTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred ceEEEEccC--CCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 345677753 24566664 67887 235678999999999999855
No 55
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=42.13 E-value=19 Score=26.97 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=24.0
Q ss_pred ceEEEEeEEEEcCEEEEEecCCceEEeccCceeeec
Q 040581 225 DYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATME 260 (394)
Q Consensus 225 ~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp 260 (394)
.|.=.+..++|+|+.++ +++|||+-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE------VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE------EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE------EEEecCCCceEEc
Confidence 35545667999999776 8999999988874
No 56
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=42.09 E-value=30 Score=30.04 Aligned_cols=39 Identities=15% Similarity=0.064 Sum_probs=27.8
Q ss_pred EEEeeeecCCCccEEEE---EeeCCC-----CCeEEEEEEcCCCceeeeC
Q 040581 25 VAIPVVKDVSTLQYVAK---IHHGVS-----QVPINLVLDLGGPLTWVDC 66 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGS~~~wv~~ 66 (394)
..+|+.. .+.|.++ |.||.. .....+++|||++.+++|.
T Consensus 180 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 180 TYVPVTY---QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEEE---ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred EEEEccc---CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 4556654 2467665 678762 3467899999999999974
No 57
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=41.54 E-value=31 Score=31.45 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=28.8
Q ss_pred CCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccCceeeechH
Q 040581 212 LPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 212 g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
|.+.-.|+... ..|.+ .|+||.+.+. +++|||++.+.+|..
T Consensus 4 g~v~~~~~~~~-~~Y~~---~i~iG~Q~~~------v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 4 GVATNTPTAND-EEYIT---PVTIGGTTLN------LNFDTGSADLWVFST 44 (323)
T ss_dssp EEEEEEECGGG-SCEEE---EEEETTEEEE------EEEETTCCCEEECBT
T ss_pred CceeeeecCCC-CEEEE---EEEECCEEEE------EEEeCCCcceEEecC
Confidence 44555666543 56664 5778855544 899999999999875
No 58
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=41.36 E-value=23 Score=27.41 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=25.8
Q ss_pred CceEEEEeEEEEcCEEEEEecCCceEEeccCceeeech
Q 040581 224 QDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMES 261 (394)
Q Consensus 224 ~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~ 261 (394)
..|.=.+. ++|+|+.++ +++|||+-.+.+++
T Consensus 10 ~l~~rP~v-ikI~Gq~~e------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE------EEecCCCCcEEEcc
Confidence 35666777 999999776 89999999999885
No 59
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=41.15 E-value=20 Score=30.61 Aligned_cols=27 Identities=22% Similarity=0.159 Sum_probs=23.9
Q ss_pred EEEEEeeCCCCCeEEEEEEcCCCceeeeC
Q 040581 38 YVAKIHHGVSQVPINLVLDLGGPLTWVDC 66 (394)
Q Consensus 38 Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~ 66 (394)
-.+.+.||. |.+..++|||..++-+..
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEec
Confidence 467899999 999999999999999863
No 60
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=40.24 E-value=34 Score=31.19 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=28.4
Q ss_pred CCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccCceeeechH
Q 040581 212 LPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 212 g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
|.+.-.|+... ..|.+ .|+||.+.+. +++|||++.+.+|..
T Consensus 3 ~~v~~~~~~~~-~~Y~~---~i~iG~Q~~~------v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNND-EEYLT---PVTVGKSTLH------LDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTT-SCEEE---EEEEBTEEEE------EEEETTCCCEEEECT
T ss_pred ceEEeEEcCCC-CEEEE---EEEECCEEEE------EEEeCCCccceEeeC
Confidence 34455565533 56664 4778855544 899999999999875
No 61
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=39.70 E-value=21 Score=27.99 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=19.3
Q ss_pred eCCCCCeEEEEEEcCCCceeeeCCC
Q 040581 44 HGVSQVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 44 iGtP~q~~~v~~DTGS~~~wv~~~~ 68 (394)
||. |.+..++|||..++-+...+
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEED 49 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETTT
T ss_pred CCC--EEEEEEecCCCCcEEEeccc
Confidence 665 78899999999999997554
No 62
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=39.68 E-value=31 Score=29.85 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=24.0
Q ss_pred ccEEE---EEeeCCC----CCeEEEEEEcCCCceeeeCC
Q 040581 36 LQYVA---KIHHGVS----QVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 36 ~~Y~~---~i~iGtP----~q~~~v~~DTGS~~~wv~~~ 67 (394)
+.|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45655 4678763 35678999999999999854
No 63
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=38.83 E-value=36 Score=31.03 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=28.4
Q ss_pred CCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEEeccCceeeechH
Q 040581 212 LPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 212 g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
+.+.-.|+... ..|.+ .|+||.+.+. ++||||++.+.+|..
T Consensus 4 ~~v~~~~~~~~-~~Y~~---~i~iG~q~~~------v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSND-EEYIT---QVTVGDDTLG------LDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGG-CCEEE---EEEETTEEEE------EEEETTCCCEEECBT
T ss_pred CceeeeEcCCC-CEEEE---EEEECCEEEE------EEEcCCCcceEEecC
Confidence 34455566533 55654 5778855544 899999999999975
No 64
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=38.78 E-value=27 Score=31.97 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=30.4
Q ss_pred CeEEEeeeecCCCccEEEE---EeeCCC---CCeEEEEEEcCCCceeeeCC
Q 040581 23 NSVAIPVVKDVSTLQYVAK---IHHGVS---QVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGS~~~wv~~~ 67 (394)
+...+|+.. ..+.|.++ |.||.- .....+++|||++.+++|..
T Consensus 181 ~l~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 181 SITYTAVST--KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp CCEEEECBC--TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred ceEEEEccC--CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 345677754 23567655 678873 34678999999999999754
No 65
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=31.98 E-value=53 Score=30.30 Aligned_cols=43 Identities=14% Similarity=0.102 Sum_probs=30.3
Q ss_pred CCCceEEecccCC-CceEEEEeEEEEc--CEEEEEecCCceEEeccCceeeechH
Q 040581 211 KLPLMYTPLIGKS-QDYFINVKSIKIN--GNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 211 ~g~~~~tpl~~~~-~~y~v~l~~i~v~--~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
+|.+.-.|+.... ..|.+ .|+|| .+.+. ++||||++.+.+|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP~q~~~------v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTPGQDFY------LLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTTTEEEE------EEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCCCcEEE------EEEcCCCCCeEECCC
Confidence 3666677886532 55654 58888 45544 899999999999864
No 66
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=31.30 E-value=52 Score=30.97 Aligned_cols=44 Identities=9% Similarity=0.166 Sum_probs=29.1
Q ss_pred CeEEEeeeecCCCccEEEE---EeeCCC------CCeE--------EEEEEcCCCceeeeCC
Q 040581 23 NSVAIPVVKDVSTLQYVAK---IHHGVS------QVPI--------NLVLDLGGPLTWVDCD 67 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~---i~iGtP------~q~~--------~v~~DTGS~~~wv~~~ 67 (394)
+...+||.... .+.|.++ |.||.- +..+ .+++|||++++++|..
T Consensus 216 ~l~~~Pl~~~~-~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 216 DLAFTPLTITL-QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp TEEEEECEECT-TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHH
T ss_pred ceeecccccCC-CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 56778887742 3577765 678761 1122 2899999999998743
No 67
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=30.06 E-value=47 Score=25.51 Aligned_cols=26 Identities=4% Similarity=0.042 Sum_probs=21.7
Q ss_pred EeEEEEcCEEEEEecCCceEEeccCceeeech
Q 040581 230 VKSIKINGNPLSVTIEGLTKLSTIVPYATMES 261 (394)
Q Consensus 230 l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~ 261 (394)
+..++|+|+.++ +++|||+-.+.+.+
T Consensus 11 ~vti~I~Gq~~e------aLLDTGADdTVi~~ 36 (114)
T 3sqf_A 11 SLTLWLDDKMFT------GLINTGADVTIIKL 36 (114)
T ss_dssp EEEEEETTEEEE------EEECTTCSSCEEEG
T ss_pred eEEEEECCEEEE------EEEccCCCceEEec
Confidence 456899998776 89999999988874
No 68
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=29.45 E-value=32 Score=32.20 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=28.9
Q ss_pred CeEEEeeeecCCCccEEE---EEeeCC-----CCCeE---EEEEEcCCCceeeeCC
Q 040581 23 NSVAIPVVKDVSTLQYVA---KIHHGV-----SQVPI---NLVLDLGGPLTWVDCD 67 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~---~i~iGt-----P~q~~---~v~~DTGS~~~wv~~~ 67 (394)
+..-+||........|++ .|.||. |+..+ .+++|||++++.+|..
T Consensus 191 ~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~ 246 (381)
T 1t6e_X 191 SMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPD 246 (381)
T ss_dssp TCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHH
T ss_pred cceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHH
Confidence 445677776322235655 467886 23323 3899999999999743
No 69
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=28.89 E-value=58 Score=29.66 Aligned_cols=37 Identities=16% Similarity=0.147 Sum_probs=25.3
Q ss_pred EecccCCCceEEEEeEEEEc--CEEEEEecCCceEEeccCceeeechH
Q 040581 217 TPLIGKSQDYFINVKSIKIN--GNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 217 tpl~~~~~~y~v~l~~i~v~--~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
.|+......|.+ .|.|| .+.+. +++|||++.+.+|..
T Consensus 5 ~~l~~~~~~Y~~---~i~iGtP~q~~~------v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEGPSYAA---DIVVGSNQQKQT------VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECSSSEEE---EEEETTTTEEEE------EEEETTCCCEEEEEE
T ss_pred EEEecCCcEEEE---EEEEcCCCcEEE------EEEcCCCCCEEEecC
Confidence 355444355664 57888 45443 899999999999843
No 70
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=27.85 E-value=51 Score=25.30 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=22.0
Q ss_pred EEeEEEEc-----CEEEEEecCCceEEeccCceeeech
Q 040581 229 NVKSIKIN-----GNPLSVTIEGLTKLSTIVPYATMES 261 (394)
Q Consensus 229 ~l~~i~v~-----~~~~~~~~~~~~iiDTGTt~~~lp~ 261 (394)
.+..|+|+ |+.++ +++|||.-.+.+++
T Consensus 11 PlvtikI~~~~~~Gq~~e------aLLDTGADdTVl~~ 42 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIE------ALLDTGADMTVIPI 42 (116)
T ss_dssp CEEEEEEECSSSCCEEEE------EEECTTBSSCEEEG
T ss_pred CeEEEEEccccCCCeEeE------EEeccCCCccEEec
Confidence 45678888 77665 89999999999884
No 71
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=27.10 E-value=65 Score=29.42 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=25.1
Q ss_pred EecccCCCceEEEEeEEEEc--CEEEEEecCCceEEeccCceeeechH
Q 040581 217 TPLIGKSQDYFINVKSIKIN--GNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 217 tpl~~~~~~y~v~l~~i~v~--~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
.|+......|.+ .|+|| .+.+. ++||||++.+.+|..
T Consensus 5 ~~l~~~~~~Y~~---~i~iGtP~q~~~------v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 5 VTLHNEAITYTA---DITVGSDNQKLN------VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEECSSCEEE---EEEETTTTEEEE------EEEETTCCCEEEEEE
T ss_pred EEEecCCeEEEE---EEEECCCCcEEE------EEEeCCCCCeEEecC
Confidence 344443355664 57888 45444 899999999999843
No 72
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=26.43 E-value=67 Score=29.31 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=24.8
Q ss_pred EecccCCCceEEEEeEEEEc--CEEEEEecCCceEEeccCceeeech
Q 040581 217 TPLIGKSQDYFINVKSIKIN--GNPLSVTIEGLTKLSTIVPYATMES 261 (394)
Q Consensus 217 tpl~~~~~~y~v~l~~i~v~--~~~~~~~~~~~~iiDTGTt~~~lp~ 261 (394)
.|+......|.+ .|+|| .+.+. ++||||++.+.+|.
T Consensus 5 ~~l~n~~~~Y~~---~i~iGTP~q~~~------v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 5 VPATNQLVDYVV---NVGVGSPATTYS------LLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEECSSCEEE---EEEETTTTEEEE------EEEETTCCCCEECS
T ss_pred EeeeccCcEEEE---EEEECCCCcEEE------EEEeCCChhheecC
Confidence 455433345554 58888 45443 89999999999985
No 73
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=26.18 E-value=68 Score=31.17 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=28.1
Q ss_pred EEEeeeecCCCccEEEE---EeeCC-----CCCeEEEEEEcCCCceeeeCC
Q 040581 25 VAIPVVKDVSTLQYVAK---IHHGV-----SQVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~---i~iGt-----P~q~~~v~~DTGS~~~wv~~~ 67 (394)
.-+|+.. .+.|.++ |.||. +.....+++|||++++++|..
T Consensus 223 ~~~pv~~---~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 223 TYVPVTQ---KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp EEEEEEE---ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred eEEeccC---CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 4456654 2467665 67775 335688999999999999743
No 74
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=26.02 E-value=58 Score=29.95 Aligned_cols=42 Identities=21% Similarity=0.215 Sum_probs=29.2
Q ss_pred CeEEEeeeecCCCccEEEE---EeeCCC----CCeEEEEEEcCCCceeeeCC
Q 040581 23 NSVAIPVVKDVSTLQYVAK---IHHGVS----QVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 67 (394)
+...+|+.. .+.|.++ |.||.- .....+++|||++.+++|..
T Consensus 191 ~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~ 239 (351)
T 1tzs_A 191 SLNWVPVTK---QAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSD 239 (351)
T ss_dssp CCEEEECSE---ETTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEecCC---CceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCHH
Confidence 345566654 2456654 678862 35578999999999999754
No 75
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=25.93 E-value=86 Score=28.49 Aligned_cols=41 Identities=22% Similarity=0.401 Sum_probs=27.3
Q ss_pred eEEEeeeecCCCccEEE---EEeeCCCC---CeEEEEEEcCCCceeeeCC
Q 040581 24 SVAIPVVKDVSTLQYVA---KIHHGVSQ---VPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 24 ~~~~pl~~~~~~~~Y~~---~i~iGtP~---q~~~v~~DTGS~~~wv~~~ 67 (394)
...+|+... ..|.+ .|.||.-. ....+++|||++.+++|..
T Consensus 183 l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~~ 229 (342)
T 3pvk_A 183 LIALPVTSD---RELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQD 229 (342)
T ss_dssp CEEEECCCS---SSCEEEEEEEEETTEEEEEEEEEEEECTTCSSEEECHH
T ss_pred eEEeecCcc---ceEEEEEeEEEECCEEecCCCceEEEeCCCCCeecCHH
Confidence 455666542 24554 46787622 2368999999999999854
No 76
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=25.42 E-value=63 Score=30.34 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=28.1
Q ss_pred EEEeeeecCCCccEEEE---EeeCCC----CCeEEEEEEcCCCceeeeCC
Q 040581 25 VAIPVVKDVSTLQYVAK---IHHGVS----QVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 67 (394)
.-+|+.. .+.|.++ |.||.- .....+++|||++++++|..
T Consensus 234 ~~~pv~~---~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 234 HYINLIK---TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp EEEEBSS---TTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred EEEEcCC---CceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 3455543 3566664 678873 35689999999999999854
No 77
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=25.07 E-value=56 Score=29.64 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=27.4
Q ss_pred CceEEecccCC-CceEEEEeEEEEcC--EEEEEecCCceEEeccCceeeechH
Q 040581 213 PLMYTPLIGKS-QDYFINVKSIKING--NPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 213 ~~~~tpl~~~~-~~y~v~l~~i~v~~--~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
++.-.|+.... ..|.+ .|+||. +.+. +++|||++.+.+|..
T Consensus 2 ~~~~~~l~n~~~~~Y~~---~i~iGtP~q~~~------v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFG---KIYLGTPPQEFT------VLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETTTEEEE---EEEETTTTEEEE------EEEETTCCCEEEEBT
T ss_pred CcceeeeEeccCCEEEE---EEEECCCCeEEE------EEEeCCccceEEcCC
Confidence 34455665421 45554 578884 4443 899999999999864
No 78
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=24.66 E-value=52 Score=30.03 Aligned_cols=37 Identities=14% Similarity=0.120 Sum_probs=25.8
Q ss_pred EecccCCCceEEEEeEEEEcC--EEEEEecCCceEEeccCceeeechH
Q 040581 217 TPLIGKSQDYFINVKSIKING--NPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 217 tpl~~~~~~y~v~l~~i~v~~--~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
.|+......|.+ .|+||. +.+. +++|||++.+.+|..
T Consensus 5 ~~l~~~~~~Y~~---~i~iGtP~Q~~~------v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYAS---KVSVGSNKQQQT------VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEE---EEEETTTTEEEE------EEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEE---EEEEcCCCcEEE------EEEeCCCCceEEecC
Confidence 456544455664 478884 4443 899999999999843
No 79
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=24.14 E-value=72 Score=28.93 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=28.3
Q ss_pred EEEeeeecCCCccEEEE---EeeCCC-----CCeEEEEEEcCCCceeeeCCC
Q 040581 25 VAIPVVKDVSTLQYVAK---IHHGVS-----QVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 25 ~~~pl~~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGS~~~wv~~~~ 68 (394)
..+|+.. .+.|.++ |.||.- .....+++|||++.+++|...
T Consensus 181 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~ 229 (329)
T 1htr_B 181 YWAPVTQ---ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQY 229 (329)
T ss_dssp EEEEBCS---SSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGG
T ss_pred EEEECCC---CceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHH
Confidence 3445543 3456654 678762 356789999999999998654
No 80
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=24.12 E-value=64 Score=29.37 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=22.5
Q ss_pred CceEEEEeEEEEcCEEEEEecCCceEEeccCceeeechH
Q 040581 224 QDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESS 262 (394)
Q Consensus 224 ~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~~ 262 (394)
..|.+ .|+||.+.+. +++|||++.+.+|..
T Consensus 17 ~~Y~~---~i~iG~Q~~~------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAG---ITKIGNQNFL------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEE---EEEETTEEEE------EEEETTCCCEEEECT
T ss_pred CEEEE---EEEECCEEEE------EEEeCCCcceEEecC
Confidence 45654 4778855544 899999999999854
No 81
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=22.71 E-value=80 Score=29.34 Aligned_cols=42 Identities=14% Similarity=0.045 Sum_probs=29.1
Q ss_pred CeEEEeeeecCCCccEEEE---EeeCCC----CCeEEEEEEcCCCceeeeCC
Q 040581 23 NSVAIPVVKDVSTLQYVAK---IHHGVS----QVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 67 (394)
+..-+|+... +.|.++ |.||.- .+...+++|||++.+++|..
T Consensus 222 ~l~~~pv~~~---~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (370)
T 3psg_A 222 SLNWVPVSVE---GYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTS 270 (370)
T ss_dssp CCEEEECSEE---TTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEEEHH
T ss_pred cceeeccccc---ceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEECCHH
Confidence 3455666542 456664 678762 35678999999999999854
No 82
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=22.45 E-value=1e+02 Score=27.76 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=29.6
Q ss_pred CeEEEeeeecCCCccEEEE---EeeCCC----CCeEEEEEEcCCCceeeeCCC
Q 040581 23 NSVAIPVVKDVSTLQYVAK---IHHGVS----QVPINLVLDLGGPLTWVDCDS 68 (394)
Q Consensus 23 ~~~~~pl~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~~ 68 (394)
+...+|+... +.|.++ |.||.- .+ ..+++|||++.+++|...
T Consensus 178 ~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~-~~aiiDSGTt~~~lp~~~ 226 (324)
T 1am5_A 178 SIHWIPVTAE---KYWQVALDGITVNGQTAACEG-CQAIVDTGTSKIVAPVSA 226 (324)
T ss_dssp CCEEEEEEEE---TTEEEEECEEEETTEECCCCC-EEEEECTTCSSEEECTTT
T ss_pred ceEEEecCCC---cEEEEEEeEEEECCceeeccC-ceEEEecCCccEECCHHH
Confidence 4456677652 456664 678762 22 789999999999998654
No 83
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=21.69 E-value=70 Score=27.26 Aligned_cols=28 Identities=21% Similarity=0.106 Sum_probs=24.1
Q ss_pred EEEEEeeCCCCCeEEEEEEcCCCceeeeCC
Q 040581 38 YVAKIHHGVSQVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 38 Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~ 67 (394)
=.++++||. |....++|||..++-+...
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CcEEEEECC--EEEeeeecccCCceeeecc
Confidence 467899998 9999999999999998533
No 84
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=20.83 E-value=47 Score=25.94 Aligned_cols=21 Identities=5% Similarity=-0.007 Sum_probs=16.9
Q ss_pred EcCEEEEEecCCceEEeccCceeeech
Q 040581 235 INGNPLSVTIEGLTKLSTIVPYATMES 261 (394)
Q Consensus 235 v~~~~~~~~~~~~~iiDTGTt~~~lp~ 261 (394)
++|+.++ +++|||+-.+.+++
T Consensus 27 i~gq~~e------aLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QRSVYIT------ALLDSGADITIISE 47 (124)
T ss_dssp CSEEEEE------EEECTTCSSCEEET
T ss_pred CCCEEEE------EEecCCCCcEEEec
Confidence 6666554 89999999998874
No 85
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=20.61 E-value=1e+02 Score=29.18 Aligned_cols=43 Identities=9% Similarity=0.086 Sum_probs=28.6
Q ss_pred CCceEEecccCC--CceEEEEeEEEEcCEEEEEecCCceEEeccCceeeech
Q 040581 212 LPLMYTPLIGKS--QDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMES 261 (394)
Q Consensus 212 g~~~~tpl~~~~--~~y~v~l~~i~v~~~~~~~~~~~~~iiDTGTt~~~lp~ 261 (394)
.+....|+.... ..|. ..|+||.-..... ++||||+.++.+|-
T Consensus 6 ~~~~~~pv~~d~~~~~Y~---~~i~iGTPpq~~~----v~~DTGS~~lWv~c 50 (413)
T 3vla_A 6 PSALVVPVKKDASTLQYV---TTINQRTPLVSEN----LVVDLGGRFLWVDC 50 (413)
T ss_dssp CSEEEEEEEECTTTCCEE---EEEEETTTTEEEE----EEEETTCSSEEEEC
T ss_pred CccEEEEeeecCCCCeEE---EEEEcCCCCcceE----EEEeCCChhhhccc
Confidence 344556776653 3454 3578886433333 89999999999985
No 86
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=20.14 E-value=73 Score=28.97 Aligned_cols=32 Identities=13% Similarity=0.063 Sum_probs=24.1
Q ss_pred ccEEEE---EeeCCC----CCeEEEEEEcCCCceeeeCC
Q 040581 36 LQYVAK---IHHGVS----QVPINLVLDLGGPLTWVDCD 67 (394)
Q Consensus 36 ~~Y~~~---i~iGtP----~q~~~v~~DTGS~~~wv~~~ 67 (394)
+.|.++ |.||.. +....+++|||++.+++|..
T Consensus 199 ~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 237 (341)
T 3k1w_A 199 GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 237 (341)
T ss_dssp TSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred CEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCHH
Confidence 456654 677763 35678999999999999854
Done!