Your job contains 1 sequence.
>040584
MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH
KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG
CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR
YFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV
DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDA
EIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESPNSTN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040584
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 1486 2.5e-152 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 1481 8.5e-152 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 1448 2.7e-148 1
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 1228 5.5e-125 1
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 1218 6.3e-124 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 1030 5.3e-104 1
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 1029 6.7e-104 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 1025 1.8e-103 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 1024 2.3e-103 1
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 1024 2.3e-103 1
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 1023 2.9e-103 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 1009 8.8e-102 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 1009 8.8e-102 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 1002 4.9e-101 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 997 1.7e-100 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 982 6.4e-99 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 975 3.5e-98 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 972 7.4e-98 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 972 7.4e-98 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 936 4.8e-94 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 926 5.5e-93 1
SGD|S000000223 - symbol:GAL10 "UDP-glucose-4-epimerase" s... 914 1.0e-91 1
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 912 1.7e-91 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 911 2.1e-91 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 908 4.5e-91 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 908 4.5e-91 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 901 2.5e-90 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 874 1.8e-87 1
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 868 7.7e-87 1
ASPGD|ASPL0000073187 - symbol:ugeA species:162425 "Emeric... 507 2.4e-85 2
UNIPROTKB|Q5QPP3 - symbol:GALE "UDP-glucose 4-epimerase" ... 767 3.9e-76 1
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 747 5.1e-74 1
UNIPROTKB|Q5QPP4 - symbol:GALE "UDP-glucose 4-epimerase" ... 670 8.6e-73 2
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 684 2.4e-67 1
ASPGD|ASPL0000035245 - symbol:AN2951 species:162425 "Emer... 431 3.5e-67 3
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 666 2.0e-65 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 661 6.7e-65 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 604 7.3e-59 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 578 4.2e-56 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 531 4.0e-51 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 530 5.1e-51 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 525 1.7e-50 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 226 5.2e-26 2
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 283 7.6e-25 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 283 7.6e-25 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 261 1.6e-22 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 261 1.6e-22 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 259 2.6e-22 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 256 5.5e-22 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 194 1.6e-21 2
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 238 4.2e-19 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 233 8.4e-19 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 236 1.2e-18 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 236 1.2e-18 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 235 1.6e-18 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 235 1.9e-18 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 235 1.9e-18 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 228 6.8e-17 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 221 5.4e-16 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 215 7.8e-16 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 184 9.7e-16 2
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 217 1.6e-15 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 217 1.6e-15 1
UNIPROTKB|Q5QPP9 - symbol:GALE "UDP-glucose 4-epimerase" ... 192 8.6e-15 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 207 9.0e-15 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 174 9.3e-15 2
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 207 2.6e-14 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 203 3.6e-14 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 174 9.3e-14 2
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 199 1.1e-13 1
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 188 1.2e-13 2
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 200 2.0e-13 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 196 2.3e-13 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 196 2.4e-13 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 196 2.9e-13 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 144 4.1e-13 2
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 166 4.6e-13 2
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 194 5.0e-13 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 193 6.2e-13 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 195 1.6e-12 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 182 1.8e-12 2
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 189 1.9e-12 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 188 2.0e-12 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 188 2.6e-12 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 187 3.3e-12 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 151 4.1e-12 2
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 186 4.1e-12 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 187 5.5e-12 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 161 1.3e-11 2
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 181 1.4e-11 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 159 1.8e-11 2
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 180 1.9e-11 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 155 1.9e-11 2
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 155 2.1e-11 2
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 178 2.5e-11 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 156 2.8e-11 2
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 177 4.8e-11 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 156 5.2e-11 2
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 156 5.2e-11 2
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 156 5.2e-11 2
WARNING: Descriptions of 78 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 277/348 (79%), Positives = 310/348 (89%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
MA+N+LV GG GYIGSHTVLQLLLGGY VVVDNLDN+S +++ +VK+LA G ++FH
Sbjct: 2 MARNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFH 61
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
++DLRD++ALE +F+ TKFDAVIHFAGLKAVGESV+KPL Y++NNL GTITLLEVMA HG
Sbjct: 62 QVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHG 121
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
CKNLVFSSSAT YG PK VPCTEEFP+ A+NPYGR+KLFIEEICRDV+ SD EWKIILLR
Sbjct: 122 CKNLVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLR 181
Query: 181 YFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFNPVGAHPSG GEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+TKDGT VRDYIHV
Sbjct: 182 YFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHV 241
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
+DLADGHIAALRKL+D K+GCEVYNLGTG GTSVLEMV AFEKASGKKIPLV +GRRPGD
Sbjct: 242 IDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGD 301
Query: 300 AEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESPNSTN 347
AE+VYASTE+AE ELNWKAKYGI+EMCRD WNWAS NPYGY+S + N
Sbjct: 302 AEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYDSSSEDN 349
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
Identities = 276/346 (79%), Positives = 307/346 (88%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
MAK++LV GG GYIGSHTVLQLL GGY VVVDN DN+S ++ +VK+LAG GN ++FH
Sbjct: 1 MAKSVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFH 60
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
++DLRD+ ALE +F+ TKFDAVIHFAGLKAVGESV+KPL Y++NN+ GT+TLLEVMA +G
Sbjct: 61 QVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYG 120
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
CKNLVFSSSAT YGWPK VPCTEE P+ A NPYGR+KLFIEEICRDVHRSDSEWKIILLR
Sbjct: 121 CKNLVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLR 180
Query: 181 YFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFNPVGAHPSG GEDP G+PNNLMP+V QVAVGRRP LTVFGTDY TKDGT VRDYIHV
Sbjct: 181 YFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHV 240
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
+DLADGHIAALRKLDD K+ CEVYNLGTG GTSVLEMVAAFEKASGKKIPLV +GRRPGD
Sbjct: 241 MDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGD 300
Query: 300 AEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESPNS 345
AE+VYASTEKAERELNWKAK GI+EMCRD WNWAS NPYGY S ++
Sbjct: 301 AEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYGYNSSSN 346
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 271/348 (77%), Positives = 302/348 (86%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
M NILV GG GYIGSHTVLQLLLGGY TVV+DNLDN+S +++ +VK+LAG G N+T H
Sbjct: 1 MVGNILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVH 60
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
++DLRDK ALE VF+ TKFDAV+HFAGLKAVGESV KPL Y++NNL TITLLEVMAAHG
Sbjct: 61 QVDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHG 120
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
CK LVFSSSAT YGWPK VPCTEE PL M+PYGR+KLFIE+ICRDV R D EW+II+LR
Sbjct: 121 CKKLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQRGDPEWRIIMLR 180
Query: 181 YFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFNPVGAHPSG+ GEDP G PNNLMP+V QV VGR P L ++GTDY+TKDGT VRDYIHV
Sbjct: 181 YFNPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHV 240
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
VDLADGHI AL+KLDD ++GCEVYNLGTGKGT+VLEMV AFEKASG KIPLVK GRRPGD
Sbjct: 241 VDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRPGD 300
Query: 300 AEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY-ESPNST 346
AE VYASTEKAERELNWKA +GI+EMCRDQWNWAS NP+GY SPNST
Sbjct: 301 AETVYASTEKAERELNWKANFGIEEMCRDQWNWASNNPFGYGSSPNST 348
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
Identities = 229/342 (66%), Positives = 275/342 (80%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ-GNNMTFHK 61
+NILV GG G+IG+HTV+QLL G+K ++DNLDN+ AV +V+EL G + F+
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL 66
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
DLR+K +E +F+ +FDAVIHFAGLKAVGESV P YFDNNL GTI L E MA + C
Sbjct: 67 GDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNC 126
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
K +VFSSSAT YG P++VPC E+F LQAMNPYGR+KLF+EEI RD+H ++ EWKIILLRY
Sbjct: 127 KMMVFSSSATVYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIILLRY 186
Query: 182 FNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240
FNPVGAH SG+ GEDP+GIPNNLMP++ QVAVGR P L VFG DY T DG+ VRDYIHV+
Sbjct: 187 FNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYIHVM 246
Query: 241 DLADGHIAALRKL-DDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
DLADGH+AAL KL D K+GC YNLGTG+GTSVLEMV++FEKASGKKIP+ RR GD
Sbjct: 247 DLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCPRRAGD 306
Query: 300 AEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 341
A VYAST+KAE+EL WKAKYG+DEMCRDQWNWA+KNP+G++
Sbjct: 307 ATAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWGFQ 348
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
Identities = 228/343 (66%), Positives = 275/343 (80%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ-GNNMTFHK 61
+NILV GG G+IG+HTV+QLL G+K ++DN DN+ AV +V+EL G + F+
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL 66
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
DLR+K +E +F+ +FDAVIHFAGLKAVGESV+ P YFDNNL GTI L E MA + C
Sbjct: 67 GDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNC 126
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
K +VFSSSAT YG P+ +PC E+F L+AMNPYGR+KLF+EEI RD+ +++ EW+IILLRY
Sbjct: 127 KMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLRY 186
Query: 182 FNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240
FNPVGAH SG GEDP+GIPNNLMP++ QVAVGR P L V+G DY T+DG+ VRDYIHV+
Sbjct: 187 FNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHVM 246
Query: 241 DLADGHIAALRKL-DDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
DLADGHIAALRKL DPK+GC YNLGTG+GTSVLEMVAAFEKASGKKIP+ RR GD
Sbjct: 247 DLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSGD 306
Query: 300 AEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
A VYASTEKAE+EL WKAKYG+DEMCRDQW WA+ NP+GY++
Sbjct: 307 ATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQN 349
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 206/345 (59%), Positives = 245/345 (71%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ---GNNM 57
MA+ +LV GG GYIGSHTVL+LL GY VV+DN NA + + L Q G ++
Sbjct: 1 MAEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+AAL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M
Sbjct: 61 EFEEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
AHG KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNA 180
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LLRYFNP+GAH SG GEDP+GIPNNLMP+V+QVA+GRR AL VFG DY T+DGT VRD
Sbjct: 181 VLLRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
YIHVVDLA GHIAALRKL + + GC +YNLGTG G SVL+MV A EKASGKKIP R
Sbjct: 241 YIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVRAMEKASGKKIPYKVVAR 299
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
R GD YA+ A +EL W A G+D MC D W W +NP G+
Sbjct: 300 REGDVAACYANPSLALKELGWTAALGLDRMCEDLWRWQKQNPSGF 344
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 203/343 (59%), Positives = 247/343 (72%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--SEIAVAK-VKELAGYQGNNMTF 59
+ +LV GG GYIGSHTVL+LL GY VV+DN NA E ++ + ++ + G ++ F
Sbjct: 2 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEF 61
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
++D+ D+AAL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M AH
Sbjct: 62 EEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAH 121
Query: 120 GCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKIIL 178
G KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ R+D+ W +L
Sbjct: 122 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVL 181
Query: 179 LRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
LRYFNP+GAH SG+ GEDP+GIPNNLMP+V+QVA+GRR AL VFG DY+T+DGT VRDYI
Sbjct: 182 LRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYI 241
Query: 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP 297
HVVDLA GHIAAL+KL + + GC YNLGTG G SVL+MV A EKASGKKIP RR
Sbjct: 242 HVVDLAKGHIAALKKLKE-QCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARRE 300
Query: 298 GDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
GD YA+ A EL W A G+D MC D W W +NP G+
Sbjct: 301 GDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGF 343
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
Identities = 198/338 (58%), Positives = 238/338 (70%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
IL+ GG GYIGSHT ++LL YK +VVDNL N+S ++ +VKE+ G Q F+K ++
Sbjct: 3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGKQ---FEFYKENV 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
++ + +F +AVIHFAG KAVGES PL Y+ NN+ I L +VM H KN
Sbjct: 60 LNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNF 119
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184
+FSSSAT YG PK +P TEEFPL NPYG++KL IE+I RDV ++D EW I LLRYFNP
Sbjct: 120 IFSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRYFNP 179
Query: 185 VGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLA 243
GAH SG+ GEDP GIPNNLMP+VTQVAVG+ L +FG DY TKDGT VRDYIHVVDLA
Sbjct: 180 FGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHVVDLA 239
Query: 244 DGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIV 303
GH+ AL K+ K G E YNLGTGKG SVLEMV AFEK SGKKIP GRRPGD I
Sbjct: 240 KGHVKALEKVLKTK-GIEAYNLGTGKGYSVLEMVKAFEKVSGKKIPYKVIGRRPGDVAIC 298
Query: 304 YASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 341
+A KA+REL W+A+YG++EMC D W W N GY+
Sbjct: 299 FADVSKAKRELGWEAEYGLEEMCVDSWRWQVNNKNGYQ 336
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 204/345 (59%), Positives = 244/345 (70%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ---GNNM 57
MA+ +LV GG GYIGSHTVL+LL GY +V+DN NA + + L Q G ++
Sbjct: 1 MAEKVLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+AAL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M
Sbjct: 61 EFEEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
AHG KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNA 180
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LLRYFNP+GAH SG GEDP+GIPNNLMP+V+QVA+GRR L VFG DY T+DGT VRD
Sbjct: 181 VLLRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRD 240
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
YIHVVDLA GHIAALRKL + + GC +YNLGTG G SVL+MV A EKASGKKIP R
Sbjct: 241 YIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 299
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
R GD YA+ A +EL W A G+D MC D W W +NP G+
Sbjct: 300 REGDVAACYANPSLALKELGWSAALGLDRMCEDLWRWQKQNPSGF 344
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 201/345 (58%), Positives = 249/345 (72%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--SEIAVAK-VKELAGYQGNNM 57
M + +LV GG GYIGSHTVL+LL GY VV+DN N+ E ++ + ++ + G ++
Sbjct: 1 MEEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+AAL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M
Sbjct: 61 EFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
AHG K+LVFSSSAT YG P+ +P E P NPYG+SK FIEE+ +D+ R+D+ W
Sbjct: 121 AHGVKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTAWNA 180
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LLRYFNP+GAH SG+ GEDP+GIPNNLMP+V+QVA+GRR AL VFG DY+T+DGT VRD
Sbjct: 181 VLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRD 240
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
YIHVVDLA GHIAAL+KL + + GC +YNLGTG G SVL+MV A EKASGKKIP R
Sbjct: 241 YIHVVDLAKGHIAALKKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 299
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
R GD YA+ A EL W A G+D MC D W W +NP G+
Sbjct: 300 REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGF 344
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 205/345 (59%), Positives = 243/345 (70%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ---GNNM 57
MA+ +LV GG GYIGSHTVL+LL GY VV+DN NA + + L Q G ++
Sbjct: 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+ AL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
AHG KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LLRYFNP GAH SG GEDP+GIPNNLMP+V+QVA+GRR AL VFG DY T+DGT VRD
Sbjct: 181 VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
YIHVVDLA GHIAALRKL + + GC +YNLGTG G SVL+MV A EKASGKKIP R
Sbjct: 241 YIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 299
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
R GD YA+ A+ EL W A G+D MC D W W +NP G+
Sbjct: 300 REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 193/337 (57%), Positives = 242/337 (71%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
I+V GG GYIGSHTV++L+ GY V+VDNL N+S A+ +V+ + G + + FH +D+
Sbjct: 8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKE---IEFHHVDI 64
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
++ AL+ +F +VIHFAGLKAVGES + PL Y++NN+ GT+TLL +M H K L
Sbjct: 65 MNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKL 124
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184
VFSSSAT YG P VP TE+FPL A NPYGR+KL++E I +D+ SD EW I+LRYFNP
Sbjct: 125 VFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFNP 184
Query: 185 VGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLA 243
VGAHPSG GEDP+ IPNNLMP+VTQ A+G+RP L++FG DY+T DGT VRD+IHVVDLA
Sbjct: 185 VGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHVVDLA 244
Query: 244 DGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIV 303
GHI+AL L K GC YNLGTG+G SVLEMV A ++AS K+IP RR GD
Sbjct: 245 KGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRRKGDVASS 304
Query: 304 YASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
+A KA +EL WKA + D+MCRD W W S NP GY
Sbjct: 305 FADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGY 341
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 201/345 (58%), Positives = 244/345 (70%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ---GNNM 57
MA+ +LV GG GYIGSHTVL+LL GY VV+DN NA + + L Q G ++
Sbjct: 1 MAEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+AAL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTG+I LLE+M
Sbjct: 61 EFEEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMR 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
AHG KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNA 180
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LLRYFNP+GAH SG GEDP+GIPNNLMP+V+QVA+GRR L VFG DY T+DGT VRD
Sbjct: 181 VLLRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRD 240
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
YIHVVDLA GHIAALRKL + + GC +YNLGTG G SVL+MV A +KASG++IP R
Sbjct: 241 YIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVEAMKKASGQEIPYKVVAR 299
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
R GD YA+ A +EL W A G+D MC D W W +NP G+
Sbjct: 300 REGDVAACYANPSLALKELGWTAVLGLDRMCEDLWRWQKQNPSGF 344
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
Identities = 200/345 (57%), Positives = 248/345 (71%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMT-- 58
MA+ ILV GG GYIGSH VLQL GY+ VV+DNL NA+ A + L Q T
Sbjct: 5 MAERILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPI 64
Query: 59 -FHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F +LD+ D AAL +F+ +F V+HFAGLKAVGESV++PL Y++ NLTGTI LLE M
Sbjct: 65 AFQELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAME 124
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
A+ +N+VFSSSAT YG P+ +P E+ P+ NPYG+SK FIEE+ +D+ +++ W
Sbjct: 125 AYSVRNIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNA 184
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
ILLRYFNP+GAH SG GEDP+GIPNNLMP+V QVAVGR+ L+VFG DY T DGT +RD
Sbjct: 185 ILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETADGTGIRD 244
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
YIHVVDLA GHIAAL+KL + GC++YNLGTG G SVL+MV A EKASG++I +GR
Sbjct: 245 YIHVVDLAKGHIAALKKLKE-NCGCKIYNLGTGTGYSVLQMVQAMEKASGREIKYKITGR 303
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
R GD YA+ E AEREL WKA +G+D+MC D W W +NP GY
Sbjct: 304 REGDVAACYANPELAERELGWKAAFGLDKMCEDLWRWQLQNPTGY 348
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 197/347 (56%), Positives = 248/347 (71%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--SEIAVAK-VKELAGYQGNNM 57
M + ILV GG GYIGSH V++L+ G+ VV+DN NA E V + ++ + + +
Sbjct: 1 MRQKILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQI 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
FH+LDL DK LE +F F AV+HFAGLKAVGESV++PL Y+ NLTGTI LLEVM
Sbjct: 61 EFHELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQ 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
+HG +NLVFSSSAT YG P+ +P E+ P+ NPYG++K FIEE+ RD ++ +W
Sbjct: 121 SHGVRNLVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNA 180
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LLRYFNP+GAH SG+ GEDP+GIPNNL+P+V QVA+GRR L VFG DYST DGT VRD
Sbjct: 181 VLLRYFNPIGAHISGQIGEDPQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTGVRD 240
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
YIHVVDLA GHIAA+RKL D GC+VYNLGTG G SVL+MV+A EKASG+KI + R
Sbjct: 241 YIHVVDLAKGHIAAVRKLKD-SCGCKVYNLGTGTGYSVLQMVSAMEKASGRKIAYQIAPR 299
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
R GD YA AE+EL WKA++ ++ MC D W W S+NP G+ +
Sbjct: 300 RSGDVASCYADASLAEKELGWKAEFDLERMCEDLWRWQSQNPTGFSN 346
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 194/338 (57%), Positives = 242/338 (71%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
ILV GG GYIG+HTV++LL G + +V+DNL N+S A+ +V+ + G ++TF++ D+
Sbjct: 3 ILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITG---KSVTFYQGDI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
+KA L+ VF+ DAVIHFAGLKAVGESV KPL Y++NN+TGT+ L +VMA KNL
Sbjct: 60 LNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNL 119
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184
VFSSSAT YG P +P TE+FP A NPYG+SKL +E I D+H SD W I LRYFNP
Sbjct: 120 VFSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLRYFNP 179
Query: 185 VGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLA 243
VGAH SG GEDP IPNNLMPF+ QVAVG+R AL+VFG DY T DGT VRDYIHVVDLA
Sbjct: 180 VGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVDLA 239
Query: 244 DGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIV 303
GH+ AL KL K G YNLGTG+G SVL+MV AFEKA GK I + + RRPGD
Sbjct: 240 IGHLKALEKLAT-KPGLVTYNLGTGQGYSVLDMVKAFEKACGKSIAYLIAPRRPGDIAAC 298
Query: 304 YASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 341
YA + A+ +L+W+A + +++M W+W S NP GY+
Sbjct: 299 YADPDHAKTDLDWQATHSLEDMANSSWHWQSTNPNGYK 336
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 197/345 (57%), Positives = 243/345 (70%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--SEIAVAK-VKELAGYQGNNM 57
M + +LV GG GYIGSHTVL+LL GY VV+DN N+ E ++ + ++ + G ++
Sbjct: 1 MEEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+AAL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M
Sbjct: 61 EFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ--AMNPYGRSKLFIEEICRDVHRSDSEWK 175
A G K+LVFSSSAT YG P VP + P PYG+SK FIEE+ +D+ R+D+ W
Sbjct: 121 AMGVKSLVFSSSATVYGKP--VPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWN 178
Query: 176 IILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVR 234
+LLRYF P+GAH S + GEDP+GIPNNLMP+V+QVA+GRR AL VFG DY+T+DGT VR
Sbjct: 179 AVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVR 238
Query: 235 DYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSG 294
DYIHVVDLA GHIAAL+KL + + GC +YNLGTG G SVL+MV A EKASGKKIP
Sbjct: 239 DYIHVVDLAKGHIAALKKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 297
Query: 295 RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYG 339
RR GD YA+ A EL W A G+D MC D W W +NP G
Sbjct: 298 RREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSG 342
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 190/337 (56%), Positives = 239/337 (70%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG+GYIGSHT +Q++ G V++DNL N+ + +++++ G + F + D+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQ---FVQGDI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
RDKA L + +AV+HFAGLKAVGESVQKPL Y+DNN+ GT+ L+ M G K+L
Sbjct: 60 RDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSL 119
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184
VFSSSAT YG P VP TE FP +A NPYGRSKL +EE D +++ +W I LLRYFNP
Sbjct: 120 VFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNP 179
Query: 185 VGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLA 243
VG+HPSG+ GEDP+GIPNNLMPFVTQVAVGRR L+VFG+DY TKDGT VRDYIHV+DLA
Sbjct: 180 VGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDLA 239
Query: 244 DGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIV 303
DGHIAAL+K+ G +YNLGTGKG SVL++V AFE ASG+ +P RRPGD
Sbjct: 240 DGHIAALKKVGTC-AGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIAEY 298
Query: 304 YASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
+A KA ++L WKA + M +D W W S NP GY
Sbjct: 299 WADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNPQGY 335
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 190/337 (56%), Positives = 239/337 (70%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG+GYIGSHT +Q++ G V++DNL N+ + +++++ G + F + D+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQ---FVQGDI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
RDKA L + +AV+HFAGLKAVGESVQKPL Y+DNN+ GT+ L+ M G K+L
Sbjct: 60 RDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSL 119
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184
VFSSSAT YG P VP TE FP +A NPYGRSKL +EE D +++ +W I LLRYFNP
Sbjct: 120 VFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNP 179
Query: 185 VGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLA 243
VG+HPSG+ GEDP+GIPNNLMPFVTQVAVGRR L+VFG+DY TKDGT VRDYIHV+DLA
Sbjct: 180 VGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDLA 239
Query: 244 DGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIV 303
DGHIAAL+K+ G +YNLGTGKG SVL++V AFE ASG+ +P RRPGD
Sbjct: 240 DGHIAALKKVGTC-AGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIAEY 298
Query: 304 YASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
+A KA ++L WKA + M +D W W S NP GY
Sbjct: 299 WADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNPQGY 335
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 187/343 (54%), Positives = 235/343 (68%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKE-LAGYQ---GNNMTFH 60
+LV GG GYIGSHTVL++L GY + VDNL NA AK+ E L+ Q G + F+
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSG-AKLPEALSRVQEITGKKVNFY 64
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
++D+ D+ + VF K D V HFA LKAVGES + PL Y+ NN+TGT LLE MA +
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
V+SSSAT YG PK +P TEE P +PYG++K F EEI +D+ +SD W ++ L
Sbjct: 125 VFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSL 184
Query: 180 RYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
RYFNPVGAH SG+ GEDP G PNNLMP++ QVAVGRRP+L+V+G+D+ T DGT VRDYIH
Sbjct: 185 RYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIH 244
Query: 239 VVDLADGHIAALRKLDD-PKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP 297
+VDLA+GH+ AL KL + + G YNLGTG G SVL+MV AFEKASGKK+ RR
Sbjct: 245 IVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRS 304
Query: 298 GDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
GD YA A+++L WKA+ GID+MC D W W S+NP GY
Sbjct: 305 GDVATCYADATLADKKLGWKAERGIDKMCEDTWRWQSQNPNGY 347
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 181/338 (53%), Positives = 233/338 (68%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG GYIGSHT +QLL G+ +++DNL N S+ +V V E G G + TF + D+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCN-SKRSVLPVIERLG--GKHPTFVEGDI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
R++A + + D VIHFAGLKAVGESVQKPL Y+DNN+ GT+ L+ M A KN
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQA-MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
+FSSSAT YG +P E FP +PYG+SKL +E+I D+ ++ +W I LLRYFN
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179
Query: 184 PVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
PVGAHPSG GEDP+GIPNNLMP++ QVAVGRR +L +FG DY T+DGT VRDYIHV+DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239
Query: 243 ADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEI 302
ADGH+ A+ KL + K G +YNLG G G SVL++V AF KA GK + + RR GD
Sbjct: 240 ADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPA 298
Query: 303 VYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
+A KA+RELNW+ +DEM +D W+W S++P GY
Sbjct: 299 YWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 179/349 (51%), Positives = 243/349 (69%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
+K +LV GG GYIGSHTV++L+ GY VV DNL N++ +VA+++ L + ++ F++
Sbjct: 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH---HIPFYE 67
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
+DL D+ LE VF K D+VIHFAGLKAVGES Q PL Y+ NN+ GT+ LLE+M +
Sbjct: 68 VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNV 127
Query: 122 KNLVFSSSATAYG----WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE-WKI 176
VFSSSAT YG +P ++P EE PL NPYG +K IE I D++ SD + WK
Sbjct: 128 SKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKF 187
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LRYFNP+GAHPSG GEDP GIPNNL+P++ QVAVGRR L +FG DY ++DGT +RD
Sbjct: 188 AILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 247
Query: 236 YIHVVDLADGHIAALRKLD--DPKVG-CEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVK 292
YIHVVDLA GHIAAL+ L+ + G C +NLG+GKG++V E+ AF KASG +P
Sbjct: 248 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV 307
Query: 293 SGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 341
+GRR GD + A ++A+REL W+ + +++ C+D W W ++NP+GY+
Sbjct: 308 TGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQ 356
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 184/348 (52%), Positives = 234/348 (67%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
ILV GG GYIGSHTV++L+ GYK ++VDNL N+ AVA+V+ + ++ F KLDL
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVR---KSIKFFKLDL 64
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
RDK L +F K VIHFA LKAVGES++ PL Y+DNN+ GTITLL VM H K +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTV 124
Query: 125 VFSSSATAYG----WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
VFSSSAT YG + ++P E P NPYG++K IE I +D+H SD+ W+ +LR
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDLHTSDNTWRGAILR 184
Query: 181 YFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFNP+GAHPSG GEDP GIPNNL+PF+ QVA+GRR L VFG DY + DGT +RDYIHV
Sbjct: 185 YFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPIRDYIHV 244
Query: 240 VDLADGHIAALR---KLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR 296
VDLA GHIAAL K+++ + +NLGTGKG+SV ++ AF K GK +P GRR
Sbjct: 245 VDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPYEVVGRR 304
Query: 297 PGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESPN 344
GD + AS +A EL WKA+ I + CRD W W +NP+G++ N
Sbjct: 305 TGDVLNLTASPNRANSELKWKAELSITDACRDLWKWTIENPFGFQIDN 352
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 175/338 (51%), Positives = 232/338 (68%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG GYIGSHT +QLL G+ V++DNL N+ + ++ L+G Q TF + D+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQP---TFVEGDI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
R++A + + + VIHFAGLKAVGESV KPL Y+DNN+ GT+ L+ M A KN
Sbjct: 60 RNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNF 119
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQA-MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
+FSSSAT YG +P E FP +PYG+SKL +E+I D+ ++ EW I LLRYFN
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFN 179
Query: 184 PVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
PVGAHPSG GEDP+GIPNNL+P++ QVAVGRR +L +FG DY +D T VRDYIHV+DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIHVMDL 239
Query: 243 ADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEI 302
ADGH+AA+++L D K G +YNLG G G+SVL++V AF KA GK + + RR GD
Sbjct: 240 ADGHVAAMQQLAD-KPGVHIYNLGAGIGSSVLDVVNAFSKACGKPVKYHFAPRRDGDLPA 298
Query: 303 VYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
+A KA++ELNW+ +DEM +D W+W S++P GY
Sbjct: 299 YWADATKADKELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 176/349 (50%), Positives = 237/349 (67%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
ILV GG GYIGSHTV++L+ GYK V+VDNL N+S AVA+++ + ++ F+ +D+
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVK---QHVPFYDVDI 62
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
R+ L VF K VIHFA LKAVGES + PL Y+DNN++GT+ LLEV A+ K +
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 125 VFSSSATAYGWP------KVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
VFSSSAT YG ++P E P+ NPYGR+K IE I +D++ SD WK+ +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 179 LRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
LRYFNP+GAHPSG GEDP GIPNNL+P++ QVA+GRR L++FG DY+++DGT +RDYI
Sbjct: 183 LRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRDYI 242
Query: 238 HVVDLADGHIAALRKLDD-PKVGC-EVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
HVVDLA GHIAAL L + G +NLGTGKG++V E+ AF K G+++P GR
Sbjct: 243 HVVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHEVVGR 302
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESPN 344
R GD + A ++A +EL WK + ID+ C+D W W ++NP+G+ N
Sbjct: 303 RAGDVLDLTAKPDRANKELQWKTELTIDDACKDLWKWTTENPFGFNIEN 351
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 176/349 (50%), Positives = 237/349 (67%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
ILV GG GYIGSHTV++L+ GYK V+VDNL N+S AVA+++ + ++ F+ +D+
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVK---QHVPFYDVDI 62
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
R+ L VF K VIHFA LKAVGES + PL Y+DNN++GT+ LLEV A+ K +
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 125 VFSSSATAYGWP------KVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
VFSSSAT YG ++P E P+ NPYGR+K IE I +D++ SD WK+ +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 179 LRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
LRYFNP+GAHPSG GEDP GIPNNL+P++ QVA+GRR L++FG DY+++DGT +RDYI
Sbjct: 183 LRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIRDYI 242
Query: 238 HVVDLADGHIAALRKLDD-PKVGC-EVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
HVVDLA GHIAAL L + G +NLGTGKG++V E+ AF K G+++P GR
Sbjct: 243 HVVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHEVVGR 302
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESPN 344
R GD + A ++A +EL WK + ID+ C+D W W ++NP+G+ N
Sbjct: 303 RAGDVLDLTAKPDRANKELQWKTELTIDDACKDLWKWTTENPFGFNIEN 351
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 176/349 (50%), Positives = 236/349 (67%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIA-----VAKVKELAGYQGNNMT 58
+ILV G G+IGSHTVL+LL GY + +DN NA + +K +A G ++
Sbjct: 2 HILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDVP 61
Query: 59 FHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA 118
F +D+ D+AALE VF+ KFD +IH A LKAVGESV KPL Y+ NNL ++ L+++
Sbjct: 62 FQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLK 121
Query: 119 HGCKNLVFSSSATAYGWPKVVPCTEEFPL-QAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
+ KN VFSSSAT YG P +P TE+ Q + NPYG++K +E+I DV +++ EW +
Sbjct: 122 YNVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNV 181
Query: 177 ILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+LLRYFNPVGAH SG GEDP+G+PNNLMP+V+QVA+G+ P LT++G + T DGT VRD
Sbjct: 182 VLLRYFNPVGAHKSGLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRD 241
Query: 236 YIHVVDLADGHIAALRKLDDP-KVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSG 294
YIHVVDLA GH+ A ++ +G E+YNLGTG G SV +MV A +K SG+ IP VK G
Sbjct: 242 YIHVVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIP-VKIG 300
Query: 295 -RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
RPGD VY A+ +L W+A+ G++EMC D WNW +KNP G+ +
Sbjct: 301 VPRPGDVASVYCDPSLAQEKLGWRAETGLEEMCADLWNWQTKNPQGFSA 349
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 180/343 (52%), Positives = 226/343 (65%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
++L+ GG GYIGSHTV++LL + V+VDNL N+S + ++K++ +TF K
Sbjct: 2 SLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITN---KTVTFIK 58
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D+ ALE VF K +AVIHFAGLKAVGES + PL Y+ NN++GTITLL VMA +
Sbjct: 59 ADVCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQV 118
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
KNLVFSSSAT YG V P E A NPYG++KL +E + D+ +SD+ W I LRY
Sbjct: 119 KNLVFSSSATVYG-NNVSPLNETMATSATNPYGQTKLMVEHVLFDLAKSDASWSIACLRY 177
Query: 182 FNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240
FNP+GAH SG GE+P GIPNNL+P+V QVAVGR L +FG DY T+DGT VRDYIHVV
Sbjct: 178 FNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIHVV 237
Query: 241 DLADGHIAALRKLDDPK---VGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP 297
DLA GH+ AL L K GC+ NLGTG GTSVLE+V F+ S + IP RR
Sbjct: 238 DLAQGHVKALESLGHAKGTVKGCQAINLGTGNGTSVLEIVNTFKDISKQDIPYQVVPRRA 297
Query: 298 GDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
GD VYA A L+W+AK + M +D W W S+NP G+
Sbjct: 298 GDLATVYADASLANELLDWQAKLDLTAMIQDTWRWQSENPNGF 340
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 174/342 (50%), Positives = 223/342 (65%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG GYIGSHT + LL GY V+VDNL N+ AV ++++L G + FH++DL
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTG---KKVIFHQVDL 65
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
D+ AL+ VFA AVIHFAGLKAVGESVQ PL Y+ NN++GTI L+E M + ++
Sbjct: 66 LDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDF 125
Query: 125 VFSSSATAYGWPK----VVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
VFSSSAT YG P +P E P + +PYGR+KLFIE I D + + LLR
Sbjct: 126 VFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAALLR 185
Query: 181 YFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFNP GAHPSG+ GEDP GIPNNL+P++ QVAVGR L VFG DY T DGT +RDYIHV
Sbjct: 186 YFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTSDGTPIRDYIHV 245
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
DLA+ H+AAL L V C +NLG+G G++V +++ AF KA G+ +P + RR GD
Sbjct: 246 CDLAEAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVGRDLPYKVTPRRAGD 305
Query: 300 AEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 341
+ A+ +A EL WK I E+C D W W K PYG++
Sbjct: 306 VVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKYPYGFD 347
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 507 (183.5 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 100/220 (45%), Positives = 135/220 (61%)
Query: 135 WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDV---HRSDSE----------WKIILLRY 181
+P ++P E PL NPYG +K IE DV R++++ W LLRY
Sbjct: 138 FPDMIPIPEHCPLGPTNPYGNTKFAIELAITDVINAQRNNAKKAGNETEAAKWNGALLRY 197
Query: 182 FNPVGAHPSG-KGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240
FNP GAHPSG GEDP+G+P NL+P + QVA G+R L VFG DY++ DGT +RDYIH++
Sbjct: 198 FNPAGAHPSGIMGEDPQGVPYNLLPLLAQVATGKREKLLVFGDDYASHDGTAIRDYIHIL 257
Query: 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDA 300
DLADGH+ AL L G +NLGTG+G++V EM+ AF KA G+ +P + RR GD
Sbjct: 258 DLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVGRDLPYEVAPRRAGDV 317
Query: 301 EIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
+ ++ +A EL WKA+ +++ C D W W NP GY
Sbjct: 318 LNLTSNPTRANTELGWKAQRTLEQACEDLWLWTKNNPQGY 357
Score = 366 (133.9 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 83/169 (49%), Positives = 106/169 (62%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
++LV GG GYIGS T L LL GYK VV DNL N+S A+ +++ ++G + F +LD
Sbjct: 5 SVLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAE---FAQLD 61
Query: 64 LRDKAALEVVF-AGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
+ D+AA + VF A D+VIHFA LKAVGES +KPL Y+ N+ GTI LL M H
Sbjct: 62 VTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVT 121
Query: 123 NLVFSSSATAYG----WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDV 167
N+VFSSSAT YG +P ++P E PL NPYG +K IE DV
Sbjct: 122 NIVFSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAITDV 170
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 153/228 (67%), Positives = 177/228 (77%)
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
+D+ D+ AL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M AHG
Sbjct: 1 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 60
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W +LLR
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 181 YFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFNP GAH SG GEDP+GIPNNLMP+V+QVA+GRR AL VFG DY T+DGT VRDYIHV
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 180
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKK 287
VDLA GHIAALRKL + + GC +YNLGTG G SVL+MV A EKASGKK
Sbjct: 181 VDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 227
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 158/352 (44%), Positives = 215/352 (61%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+L+ GG GYIGS T L LL Y V+VDNL N+S +A+ +++ + G + D
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGKRPAFHNVDITD- 64
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
+ A +V A + D+VIHFA LKAVGES + PL Y+ N+ G+I+LL M H N+
Sbjct: 65 -EAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCNI 123
Query: 125 VFSSSATAYG----WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRD--------VHRSDS 172
VFSSSAT YG P ++P E P+ N YGR+K IE++ D + ++D
Sbjct: 124 VFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDVISDHVNAQRNNLKKADK 183
Query: 173 E---WKIILLRYFNPVGAHPSG-KGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228
W LLRYFNP GAHPSG GEDP+G+P NL+P + QVA G+R L VFG DYS++
Sbjct: 184 PFDMWNGALLRYFNPCGAHPSGLMGEDPQGVPFNLLPLLGQVATGQREKLLVFGDDYSSR 243
Query: 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI 288
DGT +RDYIHV+DLA GH+AAL L D K G + +NLG+G+G++V EM+ AF G+ +
Sbjct: 244 DGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVGRDL 303
Query: 289 PLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
P RR GD + A+ A +EL WK + +++ C+D W W NP GY
Sbjct: 304 PYEVVPRRQGDVLDLTANPALANKELGWKTELRMEDACQDLWKWVKNNPQGY 355
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 670 (240.9 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 133/203 (65%), Positives = 156/203 (76%)
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
+D+ D+ AL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M AHG
Sbjct: 1 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 60
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W +LLR
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 181 YFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFNP GAH SG GEDP+GIPNNLMP+V+QVA+GRR AL VFG DY T+DGT VRDYIHV
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 180
Query: 240 VDLADGHIAALRKLDDPKVGCEV 262
VDLA GHIAALRKL + + GC +
Sbjct: 181 VDLAKGHIAALRKLKE-QCGCRI 202
Score = 84 (34.6 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 277 VAAFEKAS---GKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEM 325
+AA K G +IP RR GD YA+ A+ EL W A G+D M
Sbjct: 188 IAALRKLKEQCGCRIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRM 239
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 149/343 (43%), Positives = 200/343 (58%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
++LV GG GYIGSH L+LL Y+ +VDNL + AV ++EL G + F D
Sbjct: 72 HVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGR-LQFIYAD 130
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
L D A+ +F FDAV+HFA + VGES Q PL Y+ N + T+ +LE MAAHG K
Sbjct: 131 LGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKT 190
Query: 124 LVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
L++SS+ YG P ++P TEE P +NPYG++K E+I D ++ S+ +++LRYFN
Sbjct: 191 LIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFN 249
Query: 184 PVGAHPSGK-GEDPRGI---PNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
+G+ P G+ GE PR + A G P L + GTDY T DGT VRDYI V
Sbjct: 250 VIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTCVRDYIDV 309
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
DL D H+ AL+K KVG +YN+GTGKG+SV E V A +KA+G +I + RR GD
Sbjct: 310 TDLVDAHVKALQKAKPRKVG--IYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAGD 367
Query: 300 AEIVYASTEKAERELNWKAKY-GIDEMCRDQWNWAS--KNPYG 339
VY+ K +ELNW AK+ + E W W +N YG
Sbjct: 368 YAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYG 410
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 431 (156.8 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 86/179 (48%), Positives = 114/179 (63%)
Query: 151 NPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQ 209
NPYGR+K E I D+ SD EW I+ LRYFNP+G SG GEDP+ P NL+P V +
Sbjct: 236 NPYGRTKWMCEAILADLAASDPEWTIVALRYFNPIGCDESGLLGEDPKQTPTNLLPVVVK 295
Query: 210 VAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVG--CEVYNLGT 267
V G L++FGTD+ T+DGT VRD+IHV DLA GHIAAL ++ K+ +NLGT
Sbjct: 296 VMTGEYNELSMFGTDWETEDGTAVRDFIHVTDLARGHIAALDAANERKLAENFRAFNLGT 355
Query: 268 GKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMC 326
G+G SV E+V A E S K+IP+ + RRPGD A ++++EL WK + + + C
Sbjct: 356 GRGHSVKEVVDAMESVSRKQIPVRAAPRRPGDVGSCVAVATRSQQELRWKTEKSLTDAC 414
Score = 150 (57.9 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 77 TKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYG 134
+K VIHFA KAV ES++ PL Y+ NN++G I + +G K +FSSSAT YG
Sbjct: 139 SKISGVIHFAAYKAVEESIKNPLKYYANNVSGLIDFASTLGKYGIKTFIFSSSATVYG 196
Score = 132 (51.5 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 33/73 (45%), Positives = 42/73 (57%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELA----GYQGNNM-TF 59
ILV GG+G+IGSHT L+LL Y VV+DNL N+ + ++K LA +G M
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDNLSNSFQSVFDRIKHLAQKHHDERGTEMPAL 108
Query: 60 HKL--DLRDKAAL 70
H D RD AAL
Sbjct: 109 HLAAHDYRDTAAL 121
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 143/344 (41%), Positives = 201/344 (58%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
++LV GG GYIGSH L+LL Y+ +VDNL + AV +++L G + F D
Sbjct: 96 HVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGR-LQFIYAD 154
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
L D A+E +F+ FDAV+HFA + VGES PL Y+ N + T+ +LE MA H K
Sbjct: 155 LGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKK 214
Query: 124 LVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
L++SS+ YG P+ +P TE+ P +NPYG++K E++ D ++ S+ +++LRYFN
Sbjct: 215 LIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKN-SDMAVMILRYFN 273
Query: 184 PVGAHPSGK-GEDPRGI---PNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
+G+ P G+ GE PR + A G P L V GTDY T DGT +RDYI V
Sbjct: 274 VIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTCIRDYIDV 333
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD 299
DL D H+ AL K KVG +YN+GTGKG SV E V A +KA+G +I + RRPGD
Sbjct: 334 TDLVDAHVKALEKAQPRKVG--IYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPRRPGD 391
Query: 300 AEIVYASTEKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYES 342
VY+ K ++LNW A++ + + + W W +P+GY S
Sbjct: 392 YAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIHPHGYNS 435
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 150/340 (44%), Positives = 200/340 (58%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAV-AKVKELAGYQGNNMTFHKLD 63
ILV GG GYIGSH V QL L K +VVDNL + AV + K + G D
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAVDTRAKLIVG-----------D 50
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
D+ L +F AVIH A VGES+ +P YF+ N++ T++LL+VM K
Sbjct: 51 FGDENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKK 110
Query: 124 LVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
+VFSS+A YG P+ P TE+FP + N YG SKL IE+ C + +R + + LRYFN
Sbjct: 111 MVFSSTAAVYGEPEKWPITEDFPQKPTNVYGYSKLVIEQ-CLEWYRQIHGFNYVSLRYFN 169
Query: 184 PVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
GA PSG GED +L+P + +V +G + LTVFGTDY T DGT +RDYIHV DL
Sbjct: 170 AAGADPSGDIGED-HNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDL 228
Query: 243 ADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEI 302
A+ HI AL KL+ + G VYNLG KG SV E++ E+ +G K+ + RRPGD +
Sbjct: 229 AEAHILALNKLNKDESG--VYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAV 286
Query: 303 VYASTEKAERELNWKAKYG-IDEMCRDQWNWASKNPYGYE 341
+ AS+EK ++ELN+ K+G I + + W W NP GY+
Sbjct: 287 LVASSEKIQKELNFTPKFGDIKTIVQTAWEWHKNNPRGYD 326
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 141/340 (41%), Positives = 190/340 (55%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
+IL+ GG GYIGSH V +L+ G VVVDNL E A+ + + Y G D
Sbjct: 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKF--YNG--------D 52
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
LRDKA L VF +AV+HFA VG S++KPL Y++NN+ G + LLEVM
Sbjct: 53 LRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDK 112
Query: 124 LVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
+FSS+A YG V TEE N YG +KL IE++ ++ S + + RYFN
Sbjct: 113 FIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQA-SNLRYKIFRYFN 171
Query: 184 PVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
GA P+G GED R +L+P V QVA+G+R + +FG DY+T DGT +RDYIHV DL
Sbjct: 172 VAGATPNGIIGEDHRP-ETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230
Query: 243 ADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEI 302
H L+ L + + YNLG G G SV E+V A + + +IP + RR GD
Sbjct: 231 VAAHFLGLKDLQNGGES-DFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPAR 289
Query: 303 VYASTEKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYE 341
+ AS++KA+ +L W +Y + + WNW K P GYE
Sbjct: 290 LVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGYE 329
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 124/332 (37%), Positives = 188/332 (56%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
IL+ GG GYIGSHT+ Q L ++ V+DNL S+IA+ ++++ ++ F + DL
Sbjct: 3 ILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFK-----FFEQDL 57
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
D ++ +F KFDA++HFA V ES+Q PL Y+ NN T L+E G
Sbjct: 58 SDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKF 117
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184
+FSS+A YG P+ +E PL +NPYGRSKL EE+ RD ++ E+K +LRYFN
Sbjct: 118 IFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNV 177
Query: 185 VGA---HPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241
GA + G+ P+ L+ + A G+R L +FG DY TKDGT +RD+IHV D
Sbjct: 178 AGACMDYTLGQ-RYPKA--TLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDD 234
Query: 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAE 301
++ H+A L L + + V+N+G G G SV E++ A +K SG + + RR GD
Sbjct: 235 ISSAHLATLDYLQENE--SNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPS 292
Query: 302 IVYASTEKAERELNWKAKYG-IDEMCRDQWNW 332
++ + K +W+ KY ++ +C+ ++W
Sbjct: 293 VLISDASKIRNLTSWQPKYDDLELICKSAFDW 324
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 110/195 (56%), Positives = 134/195 (68%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ---GNNM 57
MA+ +LV GG GYIGSHTVL+LL GY VV+DN NA + + L Q G ++
Sbjct: 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+ AL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
AHG KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180
Query: 177 ILLRYFNPVGAHPSG 191
+LLRYFNP GAH SG
Sbjct: 181 VLLRYFNPTGAHASG 195
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 126/332 (37%), Positives = 166/332 (50%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG GYIGSH V QL GY VV DNL A+ + L G DL
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHGERLV--TG--------DL 52
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
D A L+ +F F V+HFA ESV PL Y+ NN T+ LL HG +
Sbjct: 53 SDTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERF 112
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184
+FSS+A YG P EE +NPYG SKL E + RDV + + + LRYFN
Sbjct: 113 IFSSTAAVYGIPDSGVAAEESATVPINPYGTSKLMSEWMLRDVCAAHG-MRSVALRYFNV 171
Query: 185 VGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLAD 244
GA P + +L+ Q A+G R + +FGTDY T DGT +RDYIHV DLA
Sbjct: 172 AGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLAS 231
Query: 245 GHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVY 304
H+AAL L+ + N+G G G+SV E++ + SG ++ RRPGD +
Sbjct: 232 AHLAALSYLEKGGESTRI-NVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRRPGDPPSLV 290
Query: 305 ASTEKAERELNWKAKY-GIDEMCRDQWNWASK 335
A ++A L W +Y ++ + D W W K
Sbjct: 291 ARADRARTLLGWTPRYDNLETIVADAWRWEKK 322
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 109/194 (56%), Positives = 133/194 (68%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQ---GNNM 57
MA+ +LV GG GYIGSHTVL+LL GY VV+DN NA + + L Q G ++
Sbjct: 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
F ++D+ D+ AL+ +F F AVIHFAGLKAVGESVQKPL Y+ NLTGTI LLE+M
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSDSEWKI 176
AHG KNLVFSSSAT YG P+ +P E P NPYG+SK FIEE+ RD+ ++D W
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180
Query: 177 ILLRYFNPVGAHPS 190
+LLRYFNP GAH S
Sbjct: 181 VLLRYFNPTGAHAS 194
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 226 (84.6 bits), Expect = 5.2e-26, Sum P(2) = 5.2e-26
Identities = 75/252 (29%), Positives = 117/252 (46%)
Query: 1 MAKNILVI-GGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNN--M 57
M K I ++ GG G+IGSH V LL G++ V+DNL + L ++ NN +
Sbjct: 1 MRKPIAIVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHR------RNLE-HRANNPDL 53
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
TF D+ + +A +F D V HFAG+ + S++ P+ Y N+ GT+ +LE
Sbjct: 54 TFEIKDICELSAPHPLFENV--DYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECAR 111
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
A K LV+++S++ YG V P E+ P+ PY SK EE + +
Sbjct: 112 AANVKKLVYAASSSCYGLADV-PTREDHPIAPQYPYALSKYLGEEAAFHWFQVYG-LPVN 169
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
+R FN G G+ + + + +P TV G DGT RD++
Sbjct: 170 SIRIFNAYGTRVR-----TTGVYGAVFGVFFKQKLADKP-FTVVG------DGTQRRDFL 217
Query: 238 HVVDLADGHIAA 249
+V D+A + A
Sbjct: 218 YVTDVARAFLKA 229
Score = 114 (45.2 bits), Expect = 5.2e-26, Sum P(2) = 5.2e-26
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI 288
DGT RD+++V D+A A L+ + KVG E +NLG G S+ +V G ++
Sbjct: 209 DGTQRRDFLYVTDVAR---AFLKAAETRKVG-ETWNLGAGNPQSINRLVELI----GGEV 260
Query: 289 PLVKSGRRPGDAEIVYASTEKAERELNWKAKY----GIDEMCRDQWNWASKNPYGYES-P 343
+ +RPG+ + +A K +R+L W+ G+ M + W + ES
Sbjct: 261 EYIP--KRPGEPDCTWADISKIKRDLGWEPTITFADGVSRMMSEIGVWHDAPLWNKESIA 318
Query: 344 NST 346
N+T
Sbjct: 319 NAT 321
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 93/335 (27%), Positives = 156/335 (46%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQG-NNMTFHKLDL 64
LV G G+IG++ +L G++ V +DNL++ ++A+ K+ LA + +N F KLDL
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVAL-KLARLAPLEALSNFHFIKLDL 62
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
D+ + +FA F VIH A V S+ PL Y D+NL G +T+LE H ++L
Sbjct: 63 ADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHL 122
Query: 125 VFSSSATAYGWPKVVP-CTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
V++SS++ YG + +P TE+ ++ Y +K E+ + + LR+F
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKK-ANELMSHTYSHLYQLPTTGLRFFT 181
Query: 184 PVGAHPSGKGEDPRGIPNN-LMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
G P G P+ L F + G + V+ G + RD+ ++ D+
Sbjct: 182 VYG---------PWGRPDMALFKFTKAILAGE--TIDVYN------HGDLSRDFTYIDDI 224
Query: 243 ADGHIAALRKLDDP------KVGC--------EVYNLGTGKGTSVLEMVAAFEKASGKKI 288
+G I K P + G V+N+G G +L+ + A E+A G +
Sbjct: 225 VEGIIRVQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEA 284
Query: 289 PLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
+PGD +A TE + + +K++ ID
Sbjct: 285 KKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDID 319
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 93/335 (27%), Positives = 156/335 (46%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQG-NNMTFHKLDL 64
LV G G+IG++ +L G++ V +DNL++ ++A+ K+ LA + +N F KLDL
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVAL-KLARLAPLEALSNFHFIKLDL 62
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
D+ + +FA F VIH A V S+ PL Y D+NL G +T+LE H ++L
Sbjct: 63 ADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHL 122
Query: 125 VFSSSATAYGWPKVVP-CTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
V++SS++ YG + +P TE+ ++ Y +K E+ + + LR+F
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKK-ANELMSHTYSHLYQLPTTGLRFFT 181
Query: 184 PVGAHPSGKGEDPRGIPNN-LMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
G P G P+ L F + G + V+ G + RD+ ++ D+
Sbjct: 182 VYG---------PWGRPDMALFKFTKAILAGE--TIDVYN------HGDLSRDFTYIDDI 224
Query: 243 ADGHIAALRKLDDP------KVGC--------EVYNLGTGKGTSVLEMVAAFEKASGKKI 288
+G I K P + G V+N+G G +L+ + A E+A G +
Sbjct: 225 VEGIIRVQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEA 284
Query: 289 PLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
+PGD +A TE + + +K++ ID
Sbjct: 285 KKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDID 319
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 92/338 (27%), Positives = 159/338 (47%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLR 65
LV G G+IGS V +L G+ V +DN+++ +IA+ + + LA + + +F K+D+
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQAR-LARIEHASFSFIKMDIA 62
Query: 66 DKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLV 125
D+ + +F +FD V+H A V S++ P+ Y D+NL G + +LE + K+L+
Sbjct: 63 DRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLI 122
Query: 126 FSSSATAYGWPKVVP-CTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL--LRYF 182
++SS++ YG VP T++ ++ Y +K E + H + I LR+F
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMA---HSYSHLYNIPTTGLRFF 179
Query: 183 NPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
G+ G P+ + P++ + + + +G + RD+ HV D+
Sbjct: 180 TVYGSW---------GRPD-MAPYIFTKKILNGDTIDI------NNNGDMWRDFTHVDDI 223
Query: 243 ADG--HIA-------ALRKLDD--PKVGC---EVYNLGTGKGTSVLEMVAAFEKASGKKI 288
+G IA A K++ P VYN+G G S+++ V A E G I
Sbjct: 224 VEGVIRIADVIPERDAEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELG--I 281
Query: 289 PLVKSGR--RPGDAEIVYASTEKAERELNWKAKYGIDE 324
K+ R +PGD YA T+ + N+ K + E
Sbjct: 282 EAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISVKE 319
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 92/338 (27%), Positives = 159/338 (47%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLR 65
LV G G+IGS V +L G+ V +DN+++ +IA+ + + LA + + +F K+D+
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQAR-LARIEHASFSFIKMDIA 62
Query: 66 DKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLV 125
D+ + +F +FD V+H A V S++ P+ Y D+NL G + +LE + K+L+
Sbjct: 63 DRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLI 122
Query: 126 FSSSATAYGWPKVVP-CTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL--LRYF 182
++SS++ YG VP T++ ++ Y +K E + H + I LR+F
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMA---HSYSHLYNIPTTGLRFF 179
Query: 183 NPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
G+ G P+ + P++ + + + +G + RD+ HV D+
Sbjct: 180 TVYGSW---------GRPD-MAPYIFTKKILNGDTIDI------NNNGDMWRDFTHVDDI 223
Query: 243 ADG--HIA-------ALRKLDD--PKVGC---EVYNLGTGKGTSVLEMVAAFEKASGKKI 288
+G IA A K++ P VYN+G G S+++ V A E G I
Sbjct: 224 VEGVIRIADVIPERDAEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELG--I 281
Query: 289 PLVKSGR--RPGDAEIVYASTEKAERELNWKAKYGIDE 324
K+ R +PGD YA T+ + N+ K + E
Sbjct: 282 EAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISVKE 319
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 90/332 (27%), Positives = 150/332 (45%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVA--KVKELAGYQGNNMTFHK 61
+ILV G G+IG H +LL G + V +DNL++ ++ + ++++L G +G +F +
Sbjct: 3 SILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREG--FSFVR 60
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
L D+ ALE +FAG +FD V++ A V S+ P Y D+NL G I +LE HG
Sbjct: 61 TSLADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGV 120
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQ-AMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
K+LV++SS++ YG +P + + ++ Y +K E+ + S LR
Sbjct: 121 KHLVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKK-ANELMAHTYSSLYGLPTTGLR 179
Query: 181 YFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH-- 238
+F G P G P+ + T+ + RP + V+ +D T V D +
Sbjct: 180 FFTVYG---------PWGRPDMALFLFTKAILEGRP-IDVYNFGKMQRDFTYVDDIVEGV 229
Query: 239 --VVDLA-DGHIAALRKLDDPKVGC---EVYNLGTGKGTSVLEMVAAFEKASGKKIPLVK 292
V+D + + A DP +YN+G +L + A E+ G
Sbjct: 230 TRVMDRTPEPNPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGITAQKNL 289
Query: 293 SGRRPGDAEIVYASTEKAERELNWKAKYGIDE 324
+ GD YA + ++ +K I E
Sbjct: 290 LPLQAGDVPATYADVDDLMNDVGFKPATPIGE 321
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 74/239 (30%), Positives = 118/239 (49%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
ILV GG G+IGS V + ++ ++VD L A ++ +++E+ + + F+K D+
Sbjct: 3 ILVTGGAGFIGSAFVRKYAYD-HELIIVDKLTYAGDLR--RIEEVR----DRIKFYKADV 55
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
DK A+E +F K +AV+HFA V S+Q P P+ + N+ GT +L+ +G +
Sbjct: 56 ADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKF 115
Query: 125 VFSSSATAYG-WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
V S+ YG K TEE PL+ +PY SK + + R HR+ +I+ R N
Sbjct: 116 VHISTDEVYGELGKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYG-LPVIVARPCN 174
Query: 184 PVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
G P P L+P V + A+ P + V+G + ++ V D I V L
Sbjct: 175 NYG---------PWQYPEKLIPVVIKKALNNEP-IPVYGQGLNVREWLYVDDCIEAVYL 223
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 194 (73.4 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 61/212 (28%), Positives = 95/212 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
KNILV G G+IGSH L+ G+K V L + E + + +M
Sbjct: 2 KNILVTGADGFIGSHLCESLVKKGFK---VRALSQYNSFNFWGHLEKSPFL-KDMEVVSG 57
Query: 63 DLRDKAALEVVFAGTK-FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
DLRD E + TK DA+ H L A+ S P Y D N+ GT+ +LE +
Sbjct: 58 DLRDSFFCEKI---TKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEI 114
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
+ + +S++ YG VP E+ PLQ +PY SK+ + + + S + + + R
Sbjct: 115 SHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFN-LNVNIARP 173
Query: 182 FNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVG 213
FN G S + P I ++ ++ +G
Sbjct: 174 FNTYGPRQSARAIIPT-IITQILSGAKEIKLG 204
Score = 113 (44.8 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 196 PRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLD 254
PR ++P +TQ+ G + G D S K RD V+D +G I+ L
Sbjct: 179 PRQSARAIIPTIITQILSGAKEIK--LG-DLSPK-----RDLNFVLDTCEGFISLLNL-- 228
Query: 255 DPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR--PGDAEI--VYASTEKA 310
K EVYN+G+G S+ E++ +K K+ +++ +R P ++E+ + K
Sbjct: 229 --KHFGEVYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSEVFRLCCDANKL 286
Query: 311 ERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
++ NW++K ++E R + +N Y+S
Sbjct: 287 KKATNWQSKISLEEGLRQSIEYFKENLENYKS 318
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 238 (88.8 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 88/326 (26%), Positives = 145/326 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKT--VVVDNLDNA----SEIAVAKVKELAGYQGNN 56
K ILV G G+IGSH LL+ GY T V N N+ + +K L + G
Sbjct: 6 KKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFAG-- 63
Query: 57 MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
D+RD + G D V+H A L A+ S P Y D N+ GT+ +++
Sbjct: 64 ------DIRDPHGVREAMKGC--DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAA 115
Query: 117 AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKI 176
G +V +S++ YG + VP TEE PLQ +PY SK+ ++I + S + +
Sbjct: 116 RELGVAKVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFY-SSFDTPV 174
Query: 177 ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDY 236
++R FN G S + IP +TQ+A G R L + G + T+D V D
Sbjct: 175 AIIRPFNTYGPRQSARAF----IPT----VITQIASGAR-TLRL-GALHPTRDLNYVADT 224
Query: 237 IH-VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
+ + +A+ + ++ +G + + G+ ++ V + ++ +
Sbjct: 225 VAGFIAVAESEKSVGEVIN---IGSN-FEISMGETARMIADVMGADVEIVTDAERLRPDK 280
Query: 296 RPGDAEIVYASTEKAERELNWKAKYG 321
+ E ++A T KA+R L+ YG
Sbjct: 281 --SEVERLWADTSKAKRLLDHGQNYG 304
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 233 (87.1 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 75/241 (31%), Positives = 117/241 (48%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIA-VAKVKELAGYQGNNMTFHKL 62
NILV GG G+IGS+ V +L Y+T + N D + + VK + + N F K
Sbjct: 2 NILVTGGAGFIGSNFV-HYMLQSYETYKIINFDALTYSGNLNNVKSIQDHP--NYYFVKG 58
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
++++ LE V +++FA V S++ P+P++D N+ GT+TLLE++ +
Sbjct: 59 EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHI 118
Query: 123 NLVFSSSATAYG-WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
LV S+ YG K TEE PL +PY SK + I +++ + +I+ R
Sbjct: 119 KLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKT-YQLPVIVTRC 177
Query: 182 FNPVGAHPSGKGEDPRGIPNNLMPF-VTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240
N G P P L+P VT G++ L ++G DG VRD++HV
Sbjct: 178 SNNYG---------PYQYPEKLIPLMVTNALEGKK--LPLYG------DGLNVRDWLHVT 220
Query: 241 D 241
D
Sbjct: 221 D 221
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 48/168 (28%), Positives = 73/168 (43%)
Query: 176 IILLRYFN----PVGAHPSGKGEDPRGIPNNLMPF-VTQVAVGRRPALTVFGTDYSTKDG 230
+I L Y+ PV P P L+P VT G++ L ++G DG
Sbjct: 159 MIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKK--LPLYG------DG 210
Query: 231 TVVRDYIHVVDLADGHIAALRK-LDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGK-KI 288
VRD++HV D H +A+ L +VG EVYN+G + +E+V GK K
Sbjct: 211 LNVRDWLHVTD----HCSAIDVVLHKGRVG-EVYNIGGNNEKTNVEVVEQIITLLGKTKK 265
Query: 289 PLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336
+ R G + EK + E +W+ KY ++ ++ W KN
Sbjct: 266 DIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN 313
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 236 (88.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 87/337 (25%), Positives = 150/337 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELA-GYQGNNMTFHK 61
K L+ G G+IGS+ + QLL + +DN + + +V+ L Q +F
Sbjct: 16 KTWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFIN 75
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+RD A E V G D V+H A L +V S+ P+ N+TG + +L+
Sbjct: 76 GDIRDYAICEAVVNGV--DYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEV 133
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
K+ +++S++ YG +P E+ ++PY +K ++ E+ V+ ++ I LRY
Sbjct: 134 KSFTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTK-YVNELYASVYARTYGFETIGLRY 192
Query: 182 FNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD-YSTKDGTVVRDYIHVV 240
FN G + +DP G ++P T + G D + DG RD+ ++
Sbjct: 193 FNVFG-----RRQDPNGAYAAVIPKWTSSMIK--------GEDVFINGDGETSRDFCYID 239
Query: 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE---KASGKKIPLVKSGR-- 295
++ +I A + K EVYN+ G T++ ++ A + A+G + + R
Sbjct: 240 NVVQMNILAATAASEAKN--EVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDF 297
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNW 332
R GD A KA L ++ + I E + W
Sbjct: 298 RAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPW 334
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 236 (88.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 87/337 (25%), Positives = 150/337 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELA-GYQGNNMTFHK 61
K L+ G G+IGS+ + QLL + +DN + + +V+ L Q +F
Sbjct: 16 KTWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFIN 75
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+RD A E V G D V+H A L +V S+ P+ N+TG + +L+
Sbjct: 76 GDIRDYAICEAVVNGV--DYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEV 133
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
K+ +++S++ YG +P E+ ++PY +K ++ E+ V+ ++ I LRY
Sbjct: 134 KSFTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTK-YVNELYASVYARTYGFETIGLRY 192
Query: 182 FNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD-YSTKDGTVVRDYIHVV 240
FN G + +DP G ++P T + G D + DG RD+ ++
Sbjct: 193 FNVFG-----RRQDPNGAYAAVIPKWTSSMIK--------GEDVFINGDGETSRDFCYID 239
Query: 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE---KASGKKIPLVKSGR-- 295
++ +I A + K EVYN+ G T++ ++ A + A+G + + R
Sbjct: 240 NVVQMNILAATAASEAKN--EVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDF 297
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNW 332
R GD A KA L ++ + I E + W
Sbjct: 298 RAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPW 334
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 235 (87.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 85/344 (24%), Positives = 149/344 (43%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAV--AKVKELAGYQGNNMTFHKLD 63
LV G G+IG H +LL G + +DNL++ ++ + A++ +L + + +FHKLD
Sbjct: 9 LVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFP--HFSFHKLD 66
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
L D+ + +F FD V+H A V S+ P Y D+NL G +LE K+
Sbjct: 67 LADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVKH 126
Query: 124 LVFSSSATAYGWPKVVPCTEEFPLQ-AMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYF 182
LVF+SS++ YG + P +E + + Y SK E+ + + LR+F
Sbjct: 127 LVFASSSSVYGANEKYPFSESDNVDHPIALYAASKK-ANELMAHSYAHLFQLPCTGLRFF 185
Query: 183 NPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242
G P G P+ + T+ + +P + V+ G + RD+ ++ D+
Sbjct: 186 TVYG---------PWGRPDMALFKFTRNLLADKP-IDVYN------HGKMSRDFTYIDDI 229
Query: 243 ADGHIAALRKLDDPKVGCE--------------VYNLGTGKGTSVLEMVAAFEKASGKKI 288
DG + L +P +YN+G+ + +A EK KK
Sbjct: 230 VDGILLTLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKA 289
Query: 289 PLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNW 332
+PGD YA + E++ ++ + + + ++ W
Sbjct: 290 IKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEW 333
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 235 (87.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 94/335 (28%), Positives = 152/335 (45%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVK-ELAGYQGNNMTFHK 61
K L+ G G+IGS+ + LLL K V +DN + +V+ +++ Q N F K
Sbjct: 16 KTWLITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVK 75
Query: 62 LDLRDKAALEVVFAGTK--FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
D+R + + K D ++H A L +V S+ PL N+TG +T+L
Sbjct: 76 GDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKET 135
Query: 120 GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
K+ V+++S++ YG +P E+ + ++PY +K ++ E+ DV L
Sbjct: 136 QVKSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTK-YVNELYADVFHKTYGLNCTGL 194
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
RYFN G K +DP G ++P T VA+ L + G DG RD+ V
Sbjct: 195 RYFNVFG-----KRQDPDGAYAAVIPKWT-VAMIANEELLING------DGETSRDFCFV 242
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE---KASG---KKIPLVKS 293
+ +I A D K +VYN+ G TS+ + + + +A+G +K P +
Sbjct: 243 ENAVQANILAATANDAGKN--QVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQD 300
Query: 294 GRRPGDAEIVYASTEKAER----ELNWKAKYGIDE 324
R GD A KA+ E +K + GID+
Sbjct: 301 FRA-GDVRHSQADISKAKSLIGFEPEFKIQQGIDK 334
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 235 (87.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 94/335 (28%), Positives = 152/335 (45%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVK-ELAGYQGNNMTFHK 61
K L+ G G+IGS+ + LLL K V +DN + +V+ +++ Q N F K
Sbjct: 16 KTWLITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVK 75
Query: 62 LDLRDKAALEVVFAGTK--FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
D+R + + K D ++H A L +V S+ PL N+TG +T+L
Sbjct: 76 GDIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKET 135
Query: 120 GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
K+ V+++S++ YG +P E+ + ++PY +K ++ E+ DV L
Sbjct: 136 QVKSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTK-YVNELYADVFHKTYGLNCTGL 194
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
RYFN G K +DP G ++P T VA+ L + G DG RD+ V
Sbjct: 195 RYFNVFG-----KRQDPDGAYAAVIPKWT-VAMIANEELLING------DGETSRDFCFV 242
Query: 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE---KASG---KKIPLVKS 293
+ +I A D K +VYN+ G TS+ + + + +A+G +K P +
Sbjct: 243 ENAVQANILAATANDAGKN--QVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQD 300
Query: 294 GRRPGDAEIVYASTEKAER----ELNWKAKYGIDE 324
R GD A KA+ E +K + GID+
Sbjct: 301 FRA-GDVRHSQADISKAKSLIGFEPEFKIQQGIDK 334
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 228 (85.3 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 89/332 (26%), Positives = 159/332 (47%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
++LV G G++G+H L G + +DN ++ + ++ + ++ A + + + + D
Sbjct: 92 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQ-ALLERSGVFVVEGD 150
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-AAHGCK 122
+ D A L+ +F F V+H A V +++ P Y +N+ G + LLEV +A+
Sbjct: 151 INDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQP 210
Query: 123 NLVFSSSATAYGWPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSEWKIIL--L 179
+V++SS++ YG VP +E+ Q + Y +K EEI H + + + L L
Sbjct: 211 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIA---HTYNHIYGLSLTGL 267
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ-VAVGRRPALTVF-GTDYSTKDGTVVRDYI 237
R+F G P G P+ F T+ + G+ A+++F G ++ GTV RD+
Sbjct: 268 RFFTVYG---------PWGRPDMAYFFFTRDILKGK--AISIFEGVNH----GTVARDFT 312
Query: 238 HVVDLADGHIAALRKLDDP------KVGC---EVYNLGTGKGTSVLEMVAAFE---KASG 285
++ D+ G + AL + K G V+NLG V ++V E K
Sbjct: 313 YIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKA 372
Query: 286 KKIPLVKSGRRPGDAEIVYASTEKAERELNWK 317
K+ ++K R GD + +A+ A+REL +K
Sbjct: 373 KR-NIMKLPRN-GDVQFTHANISSAQRELGYK 402
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 221 (82.9 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 88/330 (26%), Positives = 152/330 (46%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV G G++G+H L G + +DN ++ + ++ + + A + + + + D+
Sbjct: 99 VLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARR-ALLERSGIFIVEGDI 157
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-AAHGCKN 123
D L +F F V+H A V +++ P Y +N+ G + LLE+ + +
Sbjct: 158 NDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPA 217
Query: 124 LVFSSSATAYGWPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSEWKIIL--LR 180
+V++SS++ YG VP +E+ Q + Y +K EEI H + + + L LR
Sbjct: 218 IVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIA---HTYNHIYGLSLTGLR 274
Query: 181 YFNPVGAHPSGKGEDPRGIPNNLMPFVTQ-VAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
+F G P G P+ F T+ + G+ ++++F S GTV RD+ ++
Sbjct: 275 FFTVYG---------PWGRPDMAYFFFTKDILKGK--SISIFE---SANHGTVARDFTYI 320
Query: 240 VDLADGHIAALRKLDDP------KVG---CEVYNLGTGKGTSVLEMVAAFE---KASGKK 287
D+ G +AAL + K G V+NLG V ++V E K KK
Sbjct: 321 DDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKK 380
Query: 288 IPLVKSGRRPGDAEIVYASTEKAERELNWK 317
L+K R GD +A+ A+REL +K
Sbjct: 381 -NLIKMPRN-GDVPFTHANISLAQRELGYK 408
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 215 (80.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 74/252 (29%), Positives = 112/252 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHK 61
K +VIGG G IGSHTV +LL V++ DN + +A+ + +
Sbjct: 7 KKFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQA-----LRDPRTKIYD 61
Query: 62 L--DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
+ D+ L G D V HFA L + + + P F N+ GT +LE A
Sbjct: 62 IGGDINQTDILNTALKGV--DGVFHFAALWLL-QCYEYPRSAFQTNIQGTFNVLETCVAQ 118
Query: 120 GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
G K LVFSSSA+ YG P TE P + YG +K+ E + H + L
Sbjct: 119 GVKRLVFSSSASVYGDALEEPMTEAHPFNSRTFYGATKIAGEAMATAYHHRYG-LPFVGL 177
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
RY N G +D RG ++ + A+ + +T++G DG+ D+++V
Sbjct: 178 RYMNVYGPR-----QDYRGAYIAVIMKMLD-ALDKGQPMTLYG------DGSQAYDFVYV 225
Query: 240 VDLADGHIAALR 251
D A +I A++
Sbjct: 226 EDCAAANICAMK 237
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 44/156 (28%), Positives = 72/156 (46%)
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
LRY N G +D RG ++ + A+ + +T++G DG+ D+++
Sbjct: 177 LRYMNVYGPR-----QDYRGAYIAVIMKMLD-ALDKGQPMTLYG------DGSQAYDFVY 224
Query: 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKK--IPLVKSGRR 296
V D A +I A+ K D E YN+GTGK TS+LE+ +K +G I + G
Sbjct: 225 VEDCAAANICAM-KADTVD---EYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTT 280
Query: 297 PGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNW 332
I +KA ++ +KA+ G+ E + W
Sbjct: 281 FVKNRI--GCPKKAAEQIGFKAEVGLTEGLQRLIEW 314
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 184 (69.8 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 61/184 (33%), Positives = 86/184 (46%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG G+IGSH V LL G+K V+DNL N S ++ L Q + + +L
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGS------LENLKCGQRDKLEIINGNL 57
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
DK L+ G + V H A V S + +NN T LLE M + L
Sbjct: 58 TDKFLLDSAVKGC--ETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRL 115
Query: 125 VFSSSATAYGWPKVVPCTEEF-PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFN 183
VF+SSA YG + E++ PL ++ YG SKL E + + K + R+ N
Sbjct: 116 VFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLI-SAYSHLYGLKATMFRFAN 174
Query: 184 PVGA 187
VG+
Sbjct: 175 IVGS 178
Score = 69 (29.3 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASG-KK 287
DG+ + Y+HV D G + K +G +YNLGT +V ++ G K
Sbjct: 204 DGSQSKPYLHVSDCVAGMLLGFEK-STKNLG--LYNLGTPDSVAVRDIACLVASEMGLKN 260
Query: 288 IPLVKSGRR---PGDAEIVYASTEKAERELNWKAKY 320
+ SG GDA V + R L +K K+
Sbjct: 261 VCYSYSGGERGWQGDAPQVRFDISRI-RTLGFKPKF 295
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 80/289 (27%), Positives = 128/289 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLL--LGGYKTVVVDNLDNASEI--AVAKVKELAGYQGNNMT 58
+ IL+ GG G+IGSH + L K +V+D LD S I +KEL N
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKEL------NFK 63
Query: 59 FHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA 118
F+K ++ D LE +F K D VIH A V S ++ + + +NN+ GT LLE
Sbjct: 64 FYKGNILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKN 123
Query: 119 HGCKNLVFSSSATAYGWPKVVP-----------CTEEFPLQAMNPYGRSKLFIEEICRDV 167
+ K ++ S+ YG + E+ L NPY SK E + +
Sbjct: 124 YKLKKFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSY 183
Query: 168 HRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227
++S + +I+ R N G P+ P ++P + + + T+ GT +T
Sbjct: 184 YKS-FKLPVIITRANNIYG---------PKQYPEKIIPKFINLLLNNKKC-TIHGTGKNT 232
Query: 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEM 276
R+Y+++ D+ LRK ++G VYN+GT S L++
Sbjct: 233 ------RNYLYIDDIVSAFDIILRK---GEIG-NVYNIGTDFEISNLDV 271
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 87/332 (26%), Positives = 158/332 (47%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
++LV G G++G+H L G + +DN ++ + ++ + ++ A + + + + D
Sbjct: 93 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQ-ALLERSGVFIVEGD 151
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-AAHGCK 122
+ D + L+ +F F V+H A V +++ P Y +N+ G + LLEV +A+
Sbjct: 152 INDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQP 211
Query: 123 NLVFSSSATAYGWPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSEWKIIL--L 179
+V++SS++ YG VP +E+ Q + Y +K EEI H + + + L L
Sbjct: 212 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIA---HTYNHIYGLSLTGL 268
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ-VAVGRRPALTVF-GTDYSTKDGTVVRDYI 237
R+F G P G P+ F T+ + G+ A+++F G ++ GTV RD+
Sbjct: 269 RFFTVYG---------PWGRPDMAYFFFTRDILKGK--AISIFEGANH----GTVARDFT 313
Query: 238 HVVDLADGHIAALRKLDDP------KVGC---EVYNLGTGKGTSVLEMVAAFE---KASG 285
++ D+ G + AL + K G V+NLG V ++V+ E K
Sbjct: 314 YIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKA 373
Query: 286 KKIPLVKSGRRPGDAEIVYASTEKAERELNWK 317
K+ ++K R GD +A+ A+RE +K
Sbjct: 374 KR-NMMKLPRN-GDVPFTHANISSAQREFGYK 403
>UNIPROTKB|Q5QPP9 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR005886 HOGENOM:HOG000168001 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
SMR:Q5QPP9 Ensembl:ENST00000456977 Uniprot:Q5QPP9
Length = 108
Score = 192 (72.6 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 210 VAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEV 262
VA+GRR AL VFG DY T+DGT VRDYIHVVDLA GHIAALRKL + + GC +
Sbjct: 1 VAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRI 52
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 27/67 (40%), Positives = 34/67 (50%)
Query: 277 VAAFEKAS---GKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWA 333
+AA K G +IP RR GD YA+ A+ EL W A G+D MC D W W
Sbjct: 38 IAALRKLKEQCGCRIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQ 97
Query: 334 SKNPYGY 340
+NP G+
Sbjct: 98 KQNPSGF 104
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 207 (77.9 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 79/314 (25%), Positives = 131/314 (41%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--SEIAVAKVKELAGYQGNNMTFHKL 62
ILV G G+IGS L+LL G+ VD ++ + L + ++ ++
Sbjct: 3 ILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAF--DDFRLERI 60
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
+ D A+E VF + V+HFA V S+ P + D N+ G+ ++++ HG +
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQ 120
Query: 123 NLVFSSSATAYGWPKVVPCTEE----FPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
+LV +S+++AYG + P E +PL Y +KL E I H +
Sbjct: 121 HLVMASTSSAYGANQKFPFEERDSAPYPLTI---YAATKLASELIAHS-HAHLYGVPTTV 176
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
LR+F+ G P G P+ T +P + VF +D T + D +
Sbjct: 177 LRFFSVYG---------PWGRPDMAFFLFTDKIFKGQP-IDVFNHGDLLRDFTYIDDLVE 226
Query: 239 VVD-LAD------GHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV 291
+ L D HI L P + N+G +++ + A E A G+K
Sbjct: 227 AIRRLMDTPPVVGNHIIRGDSLS-PVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKN 285
Query: 292 KSGRRPGDAEIVYA 305
+PGD + +A
Sbjct: 286 MIDMQPGDVKQTFA 299
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 174 (66.3 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 52/187 (27%), Positives = 82/187 (43%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
AK +LV GG G+I SH ++ L+ Y ++ NLD A K E + N F +
Sbjct: 17 AKRVLVTGGAGFIASHVIVSLV-EDYPDYMIVNLDKLDYCASLKNLEPVSNK-QNYKFIQ 74
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D ++++F K D V+HFA V S + + N+ GT L+ G
Sbjct: 75 GDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGV 134
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
+ ++ S+ YG E P Q NPY SK E + + ++ +++ R
Sbjct: 135 EKFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQS-YWERYKFPVVITRS 193
Query: 182 FNPVGAH 188
N G H
Sbjct: 194 SNVYGPH 200
Score = 76 (31.8 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 38/173 (21%), Positives = 74/173 (42%)
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
RY PV S P P ++P F++ + R+ + G+ G R++++
Sbjct: 183 RYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRK--CCIHGS------GLQRRNFLY 234
Query: 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVL----EMVAAFEKASGKK-----IP 289
D+ + + L K +P G E+YN+GT SV+ E++ ++ + + +
Sbjct: 235 AADVVEAFLTVLTK-GEP--G-EIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVD 290
Query: 290 LVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
V RP + ++ Y + L WK K +E + W KN + +++
Sbjct: 291 YVSD--RPHN-DMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKN 340
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 207 (77.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 92/348 (26%), Positives = 156/348 (44%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH-KLD 63
+LV G G++G+H + L G + +DN + + + + ++ G + F + D
Sbjct: 98 VLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQ--GLLERSGVFVVEGD 155
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-AAHGCK 122
+ D L +F F V+H A V ++Q P Y ++N+ G + LLEV +A+
Sbjct: 156 INDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQP 215
Query: 123 NLVFSSSATAYGWPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSEWKIIL--L 179
+V++SS++ YG VP +E+ Q + Y +K E I H + + + L L
Sbjct: 216 AIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIA---HTYNHIYGLSLTGL 272
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ-VAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
R+F G P G P+ F T+ + G+ +TVF S G+V RD+ +
Sbjct: 273 RFFTVYG---------PWGRPDMAYFFFTKDILKGK--TITVFE---SPDKGSVARDFTY 318
Query: 239 VVDLADGHIAALRKLDDP------KVG---CEVYNLGTGKGTSVLEMVAAFEKA----SG 285
+ D+ G + AL + K G +YNLG V ++V EK +
Sbjct: 319 IDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAK 378
Query: 286 KKI-PLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNW 332
KKI PL ++G D E +A+ A+ EL +K ++ + W
Sbjct: 379 KKIMPLPRNG----DVEFTHANITLAQAELGYKPAVDLETGLKKFVKW 422
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 203 (76.5 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 93/341 (27%), Positives = 138/341 (40%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGN-NMTFHKLDL 64
LV GG G+IG + VL+ + G + V +D L A + LA +GN + F K D+
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNL-----NTLASLEGNADHIFVKGDI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-----AAH 119
D A + + + DAV++FA V S++ P + N+ GT+ LLE + A
Sbjct: 60 GDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALP 119
Query: 120 GCKNLVFS----SSATAYGW-PKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEW 174
+ F S+ YG + TE P +PY SK + + R H +
Sbjct: 120 DTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHT---- 175
Query: 175 KIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVR 234
Y PV P P L+P V A+ P L V+G DG VR
Sbjct: 176 ------YGLPVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEP-LPVYG------DGKQVR 222
Query: 235 DYIHVVDLADGHIAALRK-LDDPKVGCEVYNLGTGKGTSVLEMVAAF----------EKA 283
D++ V D H A+R L +VG E YN+G +E+V A E
Sbjct: 223 DWLFVSD----HCEAIRTVLAKGRVG-ETYNVGGNSERQNIEVVQAICALLDQHRPREDG 277
Query: 284 SGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDE 324
++ + RPG K + EL W+ Y ++
Sbjct: 278 KPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQ 318
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 174 (66.3 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 55/189 (29%), Positives = 84/189 (44%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
AK +LV GG G+I SH ++ L+ Y ++ NLD A K E + N F +
Sbjct: 17 AKRVLVTGGAGFIASHMIVSLV-EDYPNYMIINLDKLDYCASLKNLETISNK-QNYKFIQ 74
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D ++++F K D V+HFA V S + + N+ GT L V AAH
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVL--VSAAHEA 132
Query: 122 K--NLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
+ ++ S+ YG E P Q NPY SK E + + ++ +++
Sbjct: 133 RVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQS-YWEQYKFPVVIT 191
Query: 180 RYFNPVGAH 188
R N G H
Sbjct: 192 RSSNVYGPH 200
Score = 66 (28.3 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
+Y PV S P P ++P F++ + R+ + G+ T R++++
Sbjct: 183 QYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRK--CCIHGSGLQT------RNFLY 234
Query: 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEM 276
D+ + + L+K K G E+YN+GT SV+++
Sbjct: 235 ATDVVEAFLTVLKK---GKPG-EIYNIGTNFEMSVVQL 268
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 199 (75.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 94/353 (26%), Positives = 140/353 (39%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGN-NMTFHKLDL 64
LV G G+IG + VL+ + G + V +D L A + LA +GN + F K D+
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNL-----NTLASLEGNADHIFVKGDI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-----AAH 119
D A + + + DAV++FA V S++ P + N+ GT+ LLE + A
Sbjct: 60 GDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALP 119
Query: 120 GCKNLVFS----SSATAYGW-PKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEW 174
+ F S+ YG + TE P +PY SK + + R H +
Sbjct: 120 DTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHT---- 175
Query: 175 KIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVR 234
Y PV P P L+P V A+ P L V+G DG VR
Sbjct: 176 ------YGLPVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEP-LPVYG------DGKQVR 222
Query: 235 DYIHVVDLADGHIAALRK-LDDPKVGCEVYNLGTGKGTSVLEMVAAF----------EKA 283
D++ V D H A+R L +VG E YN+G +E+V A E
Sbjct: 223 DWLFVSD----HCEAIRTVLAKGRVG-ETYNVGGNSERQNIEVVQAICALLDQHRPREDG 277
Query: 284 SGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336
++ + RPG K + EL W+ Y ++ +W N
Sbjct: 278 KPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQTVDWYLTN 330
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 188 (71.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 76/303 (25%), Positives = 131/303 (43%)
Query: 42 AVAKVKELAGYQGNNM--TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQK-- 97
A+ + GY GN + T +LDLRD+AA+ FA + D V F VG V
Sbjct: 19 AIVRKLTAEGY-GNLLLRTSGELDLRDQAAVAAFFAAEQPDYV--FLAAAKVGGIVANNT 75
Query: 98 -PLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVV--PCTEEF----PLQAM 150
P + +NL ++ G L+F S Y PK+ P EE+ PL+
Sbjct: 76 YPAEFIYDNLMIEANVIHSSYRTGVSKLLFLGSTCIY--PKMASQPIREEYLLTGPLEPT 133
Query: 151 NP-YGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ 209
N Y +K+ +CR +R + I N G + + E +P + F +
Sbjct: 134 NEAYAIAKIAGISLCRSYNRQYGT-RFIAAMPTNLYGPNDNFDLEKSHVLPALIRKF-HE 191
Query: 210 VAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269
+ P +TV+GT G +R++IHV D+AD + +R + G ++ N+G+G+
Sbjct: 192 AKIAGAPTVTVWGT------GAPLREFIHVDDVADAALYLMRHHE----GNDIVNIGSGE 241
Query: 270 GTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQ 329
S+ ++ + G + LV +P + + L W+ + G+++ R+
Sbjct: 242 EISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLH-SLGWRHRIGLEDGVRET 300
Query: 330 WNW 332
+ W
Sbjct: 301 YEW 303
Score = 44 (20.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVV---DNLDNASEIAVA 44
I V G G +GS V +L GY +++ LD + AVA
Sbjct: 7 IYVAGHRGLVGSAIVRKLTAEGYGNLLLRTSGELDLRDQAAVA 49
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 90/332 (27%), Positives = 148/332 (44%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVK-ELAGYQGNNMTFHKL 62
++LV G G++GSH L L G + DN ++ + ++ + + EL Q + +
Sbjct: 113 SVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQ--QVFIVEG 170
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-AAHGC 121
DL D L +F F ++H A V +++ P Y +N+ G + LLEV AA+
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSEWKIIL-- 178
+V++SS++ YG P +EE Q + Y +K EEI H + + + L
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIA---HTYNHIYGLSLTG 287
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ-VAVGRRPALTVFGTDYSTKDGT-VVRDY 236
LR+F G P G P+ F T+ + G+ ++ + Y T+D V RD+
Sbjct: 288 LRFFTVYG---------PWGRPDMAYFFFTKDILHGK--SIDI----YRTQDNQEVARDF 332
Query: 237 IHVVDLADGHIAALRKLDDP------KVG---CEVYNLGTGKGTSVLEMVAAFEKASGKK 287
++ D+ G + AL + K G VYNLG V +V+ E G K
Sbjct: 333 TYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTK 392
Query: 288 IP--LVKSGRRPGDAEIVYASTEKAERELNWK 317
L+K R GD +A+ A ++ +K
Sbjct: 393 AKKHLIKMPRN-GDVPYTHANVSLAYKDFGYK 423
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 196 (74.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 100/360 (27%), Positives = 145/360 (40%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGN-NMTFHK 61
+ ILV GG G+IGS V ++ +VV NLD + ++ L N F +
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQDSVV--NLDKLTY--AGNLESLTDIADNPRYAFEQ 57
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH-- 119
+D+ D+A L+ VFA + DAV+H A V S+ + N+ GT LLE A+
Sbjct: 58 VDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQ 117
Query: 120 ---GCKNLVFS----SSATAYGWPKVVP--CTEEFPLQAMNPYGRSKLFIEEICRDVHRS 170
K+ F S+ YG TE P +PY SK + + R
Sbjct: 118 QMPSEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVR----- 172
Query: 171 DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230
W L Y P P P L+P + A+ +P L V+G DG
Sbjct: 173 --AW---LRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKP-LPVYG------DG 220
Query: 231 TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAF---------E 281
+RD++ V D H AL ++ V E YN+G + +E+V E
Sbjct: 221 MQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPE 276
Query: 282 KASG--KKIPLVKSGR-RPG-DAEIVYA-STEKAERELNWKAKYGIDEMCRDQWNWASKN 336
K +G + L+ + RPG DA YA T K R+L W+ + R W N
Sbjct: 277 KPAGVARYEDLITFVQDRPGHDAR--YAVDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 196 (74.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 101/360 (28%), Positives = 144/360 (40%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGN-NMTFHK 61
KNILV GG G+IGS V ++ +VV NLD + ++ L N F +
Sbjct: 7 KNILVTGGAGFIGSAVVRHIIQNTRDSVV--NLDKLTY--AGNLESLTDIADNPRYAFEQ 62
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH-- 119
+D+ D+A L+ VFA + DAV+H A V ++ + N+ GT LLE A+
Sbjct: 63 VDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQ 122
Query: 120 ---GCKNLVFS----SSATAYGWPKVVP--CTEEFPLQAMNPYGRSKLFIEEICRDVHRS 170
K F S+ YG TE P +PY SK + + R R+
Sbjct: 123 QMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRT 182
Query: 171 DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230
Y P PR P L+P + A+ +P L V+G DG
Sbjct: 183 ----------YRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKP-LPVYG------DG 225
Query: 231 TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAF---------E 281
+RD++ V D H AL ++ V E YN+G + LE+V E
Sbjct: 226 AQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPE 281
Query: 282 KASG--KKIPLVKSGR-RPG-DAEIVYA-STEKAERELNWKAKYGIDEMCRDQWNWASKN 336
K +G + L+ + RPG DA YA K R+L W + R W N
Sbjct: 282 KPAGVARYEDLITFVQDRPGHDAR--YAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 196 (74.1 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 99/356 (27%), Positives = 138/356 (38%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNA-SEIAVAKVKELAGYQGNNMTFHKL 62
ILV GG G+IGS V ++ +VV VD L A + ++A V + Y F
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERY-----VFEHA 57
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-----A 117
D+ D A+ +FA + DAV+H A V S+ P + + N+ GT LLE A
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 118 AHGCKNLVFS----SSATAYG---WPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHR 169
K F S+ YG P V TEE PL Y S + H
Sbjct: 118 LDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHL 177
Query: 170 SDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229
+ WK Y P P P L+P V A+ + AL ++G
Sbjct: 178 VRA-WK---RTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGK-ALPIYGK------ 226
Query: 230 GTVVRDYIHVVDLADGHIAALRKL-DDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI 288
G +RD+++V D H AL + + K G E YN+G +++V + +
Sbjct: 227 GDQIRDWLYVED----HARALYTVVTEGKAG-ETYNIGGHNEKKNIDVVLTICDLLDEIV 281
Query: 289 PLVKSGR--------RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336
P KS R RPG EK R L WK + + R W N
Sbjct: 282 PKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSN 337
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 144 (55.7 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 43/117 (36%), Positives = 59/117 (50%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNASEI-AVAKVKELAGYQGNNMTFHKL 62
ILV GG G+IGS V ++ VV VD L A + ++ V + Y TF K+
Sbjct: 3 ILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRY-----TFEKV 57
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
D+ D+ LE VF+ + DAV+H A V S+ + N+ GT TLLE A H
Sbjct: 58 DICDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEA-ARH 113
Score = 96 (38.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 52/204 (25%), Positives = 75/204 (36%)
Query: 142 TEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPN 201
TE P +PY SK + + R W L Y P P P
Sbjct: 174 TETTPYTPSSPYSASKASSDHLVR-------AW---LRTYGFPTIVTNCSNNYGPYHFPE 223
Query: 202 NLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKL-DDPKVGC 260
L+P V A+ +P L ++G G +RD+++V D H AL K+ + KVG
Sbjct: 224 KLIPLVILNALEGKP-LPIYGK------GDQIRDWLYVED----HARALFKVVTEGKVG- 271
Query: 261 EVYNLGTGKGTSVLEMV----AAFEKASGKKIPLVKS----GRRPGDAEIVYASTEKAER 312
E YN+G LE+V + + K P + RPG K
Sbjct: 272 ETYNIGGHNEKRNLEVVQTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSA 331
Query: 313 ELNWKAKYGIDEMCRDQWNWASKN 336
EL+W+ + + R W N
Sbjct: 332 ELDWQPQETFETGLRKTVEWYLAN 355
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 166 (63.5 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 51/187 (27%), Positives = 80/187 (42%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
AK +LV GG G+I SH ++ L+ Y ++ NLD A K E + N F +
Sbjct: 17 AKRVLVTGGAGFIASHVIVSLV-EDYPNYMIINLDKLDYCASLKNLEPVSNK-QNYKFIQ 74
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D ++ +F K D V+HFA V S + + N+ GT L+
Sbjct: 75 GDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARV 134
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
+ ++ S+ YG E P Q NPY SK E + + ++ +++ R
Sbjct: 135 EKFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQS-YWERYKFPVVITRS 193
Query: 182 FNPVGAH 188
N G H
Sbjct: 194 SNVYGPH 200
Score = 69 (29.3 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/177 (22%), Positives = 73/177 (41%)
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
RY PV S P P ++P F++ + R+ + G+ G R++++
Sbjct: 183 RYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHDRK--CCIHGS------GLQRRNFLY 234
Query: 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPG 298
D+ + + L K +P G E+YN+GT SV+++ I L+K
Sbjct: 235 AADVVEAFLTVLTK-GEP--G-EIYNIGTNFEMSVVQLAKEL-------IQLIKETNSDS 283
Query: 299 DAE--IVYASTE---------KAER--ELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
+ E + Y S K+E+ L WK K +E + W +N + +++
Sbjct: 284 ETERWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRENFHNWKN 340
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 194 (73.4 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 97/365 (26%), Positives = 140/365 (38%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNASEI-AVAKVKELAGYQGNNMTFHKL 62
ILV GG G+IGS V ++ +VV VD L A + ++A V + Y F
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERY-----AFEHA 57
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC- 121
D+ D A+ +FA + DAV+H A V S+ P + + N+ GT LLE +
Sbjct: 58 DICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 122 ------KNLVFSSSAT--AYG---WPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHR 169
K+ F +T YG P E PL Y S + H
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHL 177
Query: 170 SDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229
+ WK Y P P P L+P V A+ + AL ++G
Sbjct: 178 VRA-WK---RTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGK-ALPIYGK------ 226
Query: 230 GTVVRDYIHVVDLADGHIAALRKL-DDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI 288
G +RD+++V D H AL + + K G E YN+G +++V + +
Sbjct: 227 GDQIRDWLYVED----HARALYTVVTEGKAG-ETYNIGGHNEKKNIDVVLTICDLLDEIV 281
Query: 289 PLVKSGR--------RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
P KS R RPG +K REL WK + + R W N
Sbjct: 282 PKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWV 341
Query: 341 ESPNS 345
E+ S
Sbjct: 342 ENVKS 346
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 193 (73.0 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 99/363 (27%), Positives = 148/363 (40%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEI-AVAKVKELAGYQGNNMTFH 60
+ IL+ GG G+IGS V ++ VVVD L A + ++A V Q F
Sbjct: 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-----QSERFAFE 56
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
K+D+ D+A L VF + D V+H A V S+ P + + N+ GT TLLE AA
Sbjct: 57 KVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLE--AARA 114
Query: 121 CKNLVFSSSATAYGWPKV--------VPCTEEF-----PLQAMNPYGRSKLFIEEICRDV 167
N + +A+ + + + T++F P +PY SK + + R
Sbjct: 115 YWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVR-- 172
Query: 168 HRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227
W L Y P P P L+P + A+ + +L V+G
Sbjct: 173 -----AW---LRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGK-SLPVYG----- 218
Query: 228 KDGTVVRDYIHVVDLADGHIAALRKLDDP-KVGCEVYNLG---TGKGTSVLEMVAAF-EK 282
+G +RD+++V D H AL + KVG E YN+G K V+E + E+
Sbjct: 219 -NGQQIRDWLYVED----HARALYCVATTGKVG-ETYNIGGHNERKNLDVVETICELLEE 272
Query: 283 ASGKKIPLVKSGR--------RPGDAEIVYA-STEKAERELNWKAKYGIDEMCRDQWNWA 333
+ K V R RPG ++ YA K REL W + + R W
Sbjct: 273 LAPNKPHGVAHYRDLITFVADRPGH-DLRYAIDASKIARELGWLPQETFESGMRKTVQWY 331
Query: 334 SKN 336
N
Sbjct: 332 LAN 334
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 86/343 (25%), Positives = 138/343 (40%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKEL-AGYQGNNMTF 59
KNIL+ G G+I SH +L+ YK VV+D LD S++ K L + N F
Sbjct: 9 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDL-----KNLDPSFSSPNFKF 63
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
K D+ + + D ++HFA V S + NN+ GT LLE
Sbjct: 64 VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 123
Query: 120 G-CKNLVFSSSATAYGWPK---VVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWK 175
G + + S+ YG V E L NPY +K E + RS
Sbjct: 124 GQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LP 182
Query: 176 IILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+I R N G P P ++P +A+ +P L + G DG+ VR
Sbjct: 183 VITTRGNNVYG---------PNQFPEKMIPKFILLAMSGKP-LPIHG------DGSNVRS 226
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVL-EMVAAFEKASGKKIPLVKSG 294
Y++ D+A+ L K + V V + V ++ F K I V++
Sbjct: 227 YLYCEDVAEAFEVVLHKGEIGHV-YNVGTKRERRVIDVARDICKLFGKDPESSIQFVEN- 284
Query: 295 RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337
RP + + + +K ++ L W+ + ++ + +W ++NP
Sbjct: 285 -RPFNDQRYFLDDQKLKK-LGWQERTNWEDGLKKTMDWYTQNP 325
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 182 (69.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 76/282 (26%), Positives = 121/282 (42%)
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
H+ DL + +L ++ DAVIH AG V E+ + P NL GT+ LL+ + A
Sbjct: 36 HRYDLLEPDSLGDLWPELP-DAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKAR 94
Query: 120 GCKN-LVFSSSATAYGW--PKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKI 176
G ++ SS YG +P EE NPY SKL E +C ++ W++
Sbjct: 95 GFSGTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEG-WRV 153
Query: 177 ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDY 236
++ R FN +G P K D I + Q+A R + D V RD+
Sbjct: 154 LVARPFNHIG--PGQK--DSFVIASA----ARQIA---RMKQGLQANRLEVGDIDVSRDF 202
Query: 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR 296
+ V D+ + LR L + G VYN+ +G+ + E++ + ++ +V+ R
Sbjct: 203 LDVQDVLSAY---LRLLSHGEAGA-VYNVCSGQEQKIRELIELLADIAQVELEIVQDPAR 258
Query: 297 PGDAEI--VYASTEKAERELNWKAKYGIDEMCRDQWN-WASK 335
AE V S + WK + I + R + W S+
Sbjct: 259 MRRAEQRRVRGSHARLHDTTGWKPEITIKQSLRAILSDWESR 300
Score = 39 (18.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKT 29
M + + V G G++G H LQ L T
Sbjct: 1 MTQRLFVTGLSGFVGKH--LQAYLAAAHT 27
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 93/355 (26%), Positives = 136/355 (38%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
IL+ GG G+IGS V ++ TVV +D L A + + +++ + N F D
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE--SLSDIS--ESNRYNFEHAD 58
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM----AAH 119
+ D A + +F + DAV+H A V S+ P + + N+ GT LLEV +A
Sbjct: 59 ICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSAL 118
Query: 120 G---CKNLVFSSSAT--AYG---WPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRS 170
G N F +T YG P V + PL Y S + H
Sbjct: 119 GEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV 178
Query: 171 DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230
+ W+ Y P P P L+P V A+ +P L ++G G
Sbjct: 179 RA-WR---RTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKP-LPIYGK------G 227
Query: 231 TVVRDYIHVVDLADGHIAALRKL-DDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP 289
+RD+++V D H AL + + K G E YN+G L++V + +P
Sbjct: 228 DQIRDWLYVED----HARALHMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDLLDEIVP 282
Query: 290 LVKSGR--------RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336
S R RPG K REL WK + R W N
Sbjct: 283 KATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 188 (71.2 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 93/352 (26%), Positives = 147/352 (41%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGN-NMTFHKL 62
NILV GG G+IGS +++ ++ + V+ N+D + A L + N F K+
Sbjct: 3 NILVTGGSGFIGS-ALIRYIINHTQDFVI-NIDKLTY--AANQSALREVENNPRYVFEKV 58
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-- 120
D+ D +E +F + DAV+H A V S+ + N+ GT TLLEV +
Sbjct: 59 DICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHT 118
Query: 121 ---CKNLVFS----SSATAYGWPKVV-PC-TEEFPLQAMNPYGRSKLFIEEICRDVHRSD 171
K F S+ YG + P TE+ P +PY SK + + HR+
Sbjct: 119 LDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTY 178
Query: 172 SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGT 231
+I+ N GA+ + L+P + AV +P L ++G DG
Sbjct: 179 G-LPVIITNSSNNYGAYQHAE---------KLIPLMISNAVMGKP-LPIYG------DGQ 221
Query: 232 VVRDYIHVVDLADGHIAALRKL---DDPKVG--CEVYNLGTGKGT-SVLEMVAAFE---- 281
+RD++ V D L K ++ +G CE NL K +LE +A +
Sbjct: 222 QIRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHI 281
Query: 282 KASGKKIPLVKSGRRPGDAEIVYA-STEKAERELNWKAKYGIDEMCRDQWNW 332
K + VK RPG ++ Y+ K EL W+ + ++ R W
Sbjct: 282 KYYEDLMTFVKD--RPGH-DVRYSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 96/365 (26%), Positives = 140/365 (38%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNASEI-AVAKVKELAGYQGNNMTFHKL 62
ILV GG G+IGS V ++ +VV VD L A + ++A++ + Y +F
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERY-----SFENA 57
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH--G 120
D+ D + F + DAV+H A V S+ P + + N+ GT LLE + G
Sbjct: 58 DICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSG 117
Query: 121 C-----KNLVFSSSAT--AYG---WPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHR 169
KN F +T YG P V E L Y S + H
Sbjct: 118 LDDEKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHL 177
Query: 170 SDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229
+ WK Y P P P L+P V A+ + AL ++G
Sbjct: 178 VRA-WK---RTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGK-ALPIYGK------ 226
Query: 230 GTVVRDYIHVVDLADGHIAALRKL-DDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI 288
G +RD+++V D H AL + + K G E YN+G +++V + +
Sbjct: 227 GDQIRDWLYVED----HARALYTVVTEGKAG-ETYNIGGHNEKKNIDVVFTICDLLDEIV 281
Query: 289 PLVKSGR--------RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340
P KS R RPG +K REL WK + + R W N
Sbjct: 282 PKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWV 341
Query: 341 ESPNS 345
E+ S
Sbjct: 342 ENVKS 346
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 187 (70.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 94/352 (26%), Positives = 144/352 (40%)
Query: 5 ILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIA-VAKVKELAGYQGNNMTFHK 61
+LV GG G+IGS+ + L G + + +D L A + + V++ Y+ F K
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYR-----FVK 64
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH-- 119
D+ D + + A + DAV+HFA V S+ P + N+ GT LLE H
Sbjct: 65 GDIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWE 124
Query: 120 -GC-KNLVFSSSAT--AYGW-PKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEW 174
G + F +T YG + TEE PL +PY SK + + R +
Sbjct: 125 SGAIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVR-AYNETFGL 183
Query: 175 KIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVR 234
++ R N G P P L+P + V +P L V+G DG VR
Sbjct: 184 PVLTTRCSNNYG---------PFQFPEKLIPLMIHNIVAGKP-LPVYG------DGRNVR 227
Query: 235 DYIHVVDLADGHIAALRK-LDDPKVGCEVYNLGTGKGTSVLEMV--------AAFEKASG 285
D++HV D H A+ L K G EV+N+G +++V + G
Sbjct: 228 DWLHVKD----HSTAIETVLKGGKPG-EVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGG 282
Query: 286 KKIPLVKSGR-RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336
+ L+ + R G S K +REL W+ Y + + +W N
Sbjct: 283 ESRGLITFVKDRLGHDRRYAISAAKIKRELGWEPSYTFERGIAETVDWYLAN 334
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 151 (58.2 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 46/162 (28%), Positives = 71/162 (43%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNM-TFHK 61
+ +LV GG G+IGSH + L G + + N+DN + +K L Q ++ +F
Sbjct: 7 RTVLVTGGAGFIGSHLICALA-GRFPHWRIINVDNLQYCS--NLKNLRSVQASSSYSFIP 63
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D ++ +F+ D V H A V S P + N+ GT L+
Sbjct: 64 GDVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASV 123
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEI 163
+ ++ S+ YG P E P + NPY RSK E I
Sbjct: 124 QRFIYISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESI 165
Score = 77 (32.2 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP 289
G R +++V D+ D + + K +G E+YN+GTG ++++ + + K +
Sbjct: 215 GLQSRHFLYVSDVTDAFLTVMEK---GILG-EIYNIGTGFEIPIIQLARELVQMTVKSVS 270
Query: 290 -------LVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE- 341
L RP E+ Y L W+ K E R W +NP +
Sbjct: 271 AESLDDWLEFVEDRPV-TELRYPMNSVKLHRLGWRPKVAWTEGIRRTVQWYEENPNYWPI 329
Query: 342 -SPNSTN 347
S N TN
Sbjct: 330 ISENQTN 336
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 186 (70.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 97/359 (27%), Positives = 140/359 (38%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
+ ILV GG G+IGS V ++ VV VD L A + + E+A F +
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLE--SLTEVA--DNPRYAFEQ 57
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA--- 118
+D+ D+A L+ VFA + DAV+H A V S+ + N+ GT LLE A
Sbjct: 58 VDICDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQ 117
Query: 119 ------HGCKNLVFSSSATAYGWPKVVP--CTEEFPLQAMNPYGRSKLFIEEICRDVHRS 170
H S+ YG TE P +PY SK + + R
Sbjct: 118 QMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVR----- 172
Query: 171 DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230
W L Y P P P L+P + A+ +P L V+G DG
Sbjct: 173 --AW---LRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKP-LPVYG------DG 220
Query: 231 TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAF---------E 281
+RD++ V D H AL ++ V E YN+G + +E+V E
Sbjct: 221 MQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPE 276
Query: 282 KASG--KKIPLVKSGR-RPGDAEIVYA-STEKAERELNWKAKYGIDEMCRDQWNWASKN 336
K +G + L+ + RPG ++ YA K R+L W + R W N
Sbjct: 277 KPAGVARYEDLITFVQDRPGH-DVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDN 334
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 187 (70.9 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 89/358 (24%), Positives = 153/358 (42%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKE-LAGYQGNNMTFHKL 62
++LV G G++GSH L L G V +DN +N + ++ + + L +G + +
Sbjct: 89 SVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVV--EG 146
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM-AAHGC 121
DL D L +F F V+H A V +++ P Y +N+ G + LLE+ AA+
Sbjct: 147 DLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQ 206
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSEWKIIL-- 178
+V++SS++ YG + VP +E Q + Y +K EEI H + + + +
Sbjct: 207 PAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEI---THTYNHIYGLAITG 263
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNL-MPFVTQVAVGRRPALTVFGTDYSTKDGT-VVRDY 236
LR+F G P G P+ F + G+ P +T+ Y K+ + RD+
Sbjct: 264 LRFFTVYG---------PWGRPDMAYFSFTRNILQGK-P-ITI----YRGKNRVDLARDF 308
Query: 237 IHVVDLADGHIAALRKLDDP------KVGC---EVYNLGTGKGTSVLEMVAAFEK---AS 284
++ D+ G + +L K G ++NLG +V +V EK
Sbjct: 309 TYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVK 368
Query: 285 GKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
K+ + G GD +A+ A E +K ++ + W YGY +
Sbjct: 369 AKRNFVEMPGN--GDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSY-YGYNT 423
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 161 (61.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K ILV GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 89 KRILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 143
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 144 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P TE++ P+ Y K E +C + + ++
Sbjct: 197 -LLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 254
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 255 VARIFNTFG--PRMHMNDGRVVSNFIL 279
Score = 64 (27.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 277 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 323
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + +KA+ L W+ ++
Sbjct: 324 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIKKAKLMLGWEPVVPLE 381
Query: 324 E 324
E
Sbjct: 382 E 382
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 181 (68.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 90/355 (25%), Positives = 148/355 (41%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMT-FHKLD 63
ILV GG G+IGS ++++L+ ++VV+ N D + + + LAG N F + D
Sbjct: 3 ILVTGGAGFIGS-ALVRMLIEQTESVVL-NFDKLTY--ASHPESLAGVADNERYHFVQAD 58
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH---- 119
+ D+A LE V + D ++H A V S+ P + N+ GT TLLE ++
Sbjct: 59 ICDRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTL 118
Query: 120 GCKN-----LVFSSSATAYG-WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G L S+ +G + +E +PY SK + + R HR+ +
Sbjct: 119 GQAQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYA- 177
Query: 174 WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233
I++ N G P P L+P + A+ +P L ++G +D V
Sbjct: 178 LPIVITNCSNNYG---------PFQYPEKLIPLMVSNALQSKP-LPIYGNGQQVRDWLYV 227
Query: 234 RDYIHVVDLA--DGHIAALRKLDDPKVGCEVYNLGTGKGT-SVLE-MVAAFEK--ASGKK 287
D++ + L G + + CE NL + S+LE +V + A G
Sbjct: 228 DDHVKALYLVATQGQLGQTYNIGG---SCEQTNLTVVRHICSLLEELVPTHPQSLAMGNA 284
Query: 288 --IPLVKSG-RRPGDAEIVYA-STEKAERELNWKAKYGIDEMCRDQWNWASKNPY 338
L++ RPG ++ YA K +REL W+ + + R W Y
Sbjct: 285 GFADLIQYVVDRPGH-DVRYAIDASKIQRELGWRPQESFESGLRKTVEWIINQQY 338
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 159 (61.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 52/207 (25%), Positives = 94/207 (45%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 66 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 120
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 121 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 173
Query: 123 NLVFSSSATAYGWPKVVPCTEEF--PLQAMNP---YGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P TE++ + + P Y K E +C + + ++
Sbjct: 174 -LLLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGV-EVR 231
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 232 VARIFNTFG--PRMHMNDGRVVSNFIL 256
Score = 64 (27.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 254 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 300
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + +KA+ L W+ ++
Sbjct: 301 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIKKAKLMLGWEPVVPLE 358
Query: 324 E 324
E
Sbjct: 359 E 359
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 180 (68.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 79/274 (28%), Positives = 121/274 (44%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN----ASEIAVAK-VKELAGYQGNNMTF 59
+L+ GG G+IGS+ + +K N D AS + V K ++E Y+ F
Sbjct: 11 VLITGGCGFIGSNYI-NFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYK-----F 64
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLE--VMA 117
+ L D+ L + D VIHFA + V ES + +N+ T TLLE V +
Sbjct: 65 VEAALEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNS 124
Query: 118 AH-GCKNLVFSSSATAYG--WPKVVPCTEEFPL-QAMNPYGRSKLFIEEICRDVHRSDSE 173
+ G K LV S+ YG + P +E L NPY SK E + R S +
Sbjct: 125 PYKGVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHS-YK 183
Query: 174 WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233
+++R N G PR I L+P T++A+ +P + G DG
Sbjct: 184 LPYVMVRMNNVYG---------PRQIHTKLIPKFTKLALDGKP-YPLMG------DGLHT 227
Query: 234 RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGT 267
R +++V D ++ A R + +G E+YN+GT
Sbjct: 228 RSWMYVEDCSE---AITRVALEGTLG-EIYNIGT 257
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 155 (59.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 65/245 (26%), Positives = 108/245 (44%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNL-DNASEIAVAKVKELAGYQGNNMTF 59
M+K L+ GG G+IGSH +L+ GY +VDN ++ +KE+
Sbjct: 1 MSKKCLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIP------ 54
Query: 60 HKLDLRDKAAL-EVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA 118
+ + DK ++ E+V + D V H A + V +++K + + N GT +L+ A
Sbjct: 55 --ISVLDKNSIYELV---NQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQA-AL 108
Query: 119 HGCKNLVFSSSATAYGWPKVVPCTEEFP-LQAMNP-----YGRSKLFIEEICRDVHRSDS 172
G K +VF+S++ YG K P +EE L Y K E +C + +
Sbjct: 109 KGKKKVVFASTSEVYGKAKP-PFSEEGDRLYGATSKIRWSYAICKTLEETLC--LGYALE 165
Query: 173 EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTV 232
+ ++RYFN G P K G+ + F++ G + V+G T+ T
Sbjct: 166 GLPVTIVRYFNIYG--PRAKDGPYAGV---IPRFISAALQGED--ILVYGDGEQTRCFTY 218
Query: 233 VRDYI 237
V D +
Sbjct: 219 VSDAV 223
Score = 64 (27.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI 288
DG R + +V D + A +R +D+ KV E+ N+G+ S+ E+ +K +
Sbjct: 209 DGEQTRCFTYVSDAVE---ATIRAMDE-KVNGEIINIGSENEKSIKEVAEVIKKLTDSSS 264
Query: 289 PLVK 292
+V+
Sbjct: 265 KIVQ 268
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 155 (59.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 51/207 (24%), Positives = 92/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 90 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 144
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 145 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 197
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P E++ P+ Y K E +C + + ++
Sbjct: 198 -LLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 255
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 256 VARIFNTFG--PRMHMNDGRVVSNFIL 280
Score = 69 (29.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G GT R + +V DL +G +A + V V NL
Sbjct: 278 FILQALQGE-P-LTVYGP------GTQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 324
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE +K SG +I + + D + KA+ L W+ ++
Sbjct: 325 GNPEEHTILEFAQLIKKLVGSGSEIQFLSEAQ--DDPQKRKPDIRKAKLLLGWEPVVPLE 382
Query: 324 E 324
E
Sbjct: 383 E 383
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 178 (67.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 68/245 (27%), Positives = 106/245 (43%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNASEIAVA-KVKELAGYQGN-NMTFHK 61
ILV GG G+IGSH V L+ G T V + ++ ++ LA + +F +
Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFVR 62
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D+ +E + A + D V HFA V SV P+ +NL GT LL+ H
Sbjct: 63 GDICDEGLIEGLMA--RHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
+ S+ YG E PL +PY SK + + H++ +++ R
Sbjct: 121 GRFLHVSTDEVYGSIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHG-MDVVVTRC 179
Query: 182 FNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240
N G PR P ++P FVT++ G + V+G + +D V D+ +
Sbjct: 180 SNNYG---------PRQFPEKMIPLFVTRLLDGLD--VPVYGDGRNIRDWLHVSDHCRGL 228
Query: 241 DLADG 245
LA G
Sbjct: 229 ALALG 233
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 156 (60.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 86
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 87 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P +E++ P+ Y K E +C + + ++
Sbjct: 140 -LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 197
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 198 VARIFNTFG--PRMHMNDGRVVSNFIL 222
Score = 64 (27.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 220 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 266
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + +KA+ L W+ ++
Sbjct: 267 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIKKAKLMLGWEPVVPLE 324
Query: 324 E 324
E
Sbjct: 325 E 325
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 177 (67.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 67/239 (28%), Positives = 101/239 (42%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
AK +LV GG G+I SH ++ L+ Y ++ NLD A K E + N F +
Sbjct: 17 AKRVLVTGGAGFIASHVIVSLV-EDYPNYMIVNLDKLDYCASLKNLETISDK-QNYKFIQ 74
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D ++++F K D V+HFA V S + + N+ GT LL AAH
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLS--AAHEA 132
Query: 122 K--NLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
+ ++ S+ YG E P Q NPY SK E C S W+
Sbjct: 133 RVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAE--CF----VQSYWE---- 182
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
RY PV S P P ++P F++ + R+ + G+ T++ D +
Sbjct: 183 RYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRK--CCIHGSGLQTRNFLYATDVV 239
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 156 (60.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 143
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 144 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P +E++ P+ Y K E +C + + ++
Sbjct: 197 -LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 254
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 255 VARIFNTFG--PRMHMNDGRVVSNFIL 279
Score = 64 (27.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 277 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 323
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + +KA+ L W+ ++
Sbjct: 324 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIKKAKLMLGWEPVVPLE 381
Query: 324 E 324
E
Sbjct: 382 E 382
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 156 (60.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 143
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 144 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P +E++ P+ Y K E +C + + ++
Sbjct: 197 -LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 254
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 255 VARIFNTFG--PRMHMNDGRVVSNFIL 279
Score = 64 (27.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 277 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 323
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + +KA+ L W+ ++
Sbjct: 324 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIKKAKLMLGWEPVVPLE 381
Query: 324 E 324
E
Sbjct: 382 E 382
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 156 (60.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 143
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 144 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P +E++ P+ Y K E +C + + ++
Sbjct: 197 -LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 254
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 255 VARIFNTFG--PRMHMNDGRVVSNFIL 279
Score = 64 (27.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 277 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 323
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + +KA+ L W+ ++
Sbjct: 324 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIKKAKLMLGWEPVVPLE 381
Query: 324 E 324
E
Sbjct: 382 E 382
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 156 (60.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 143
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 144 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P +E++ P+ Y K E +C + + ++
Sbjct: 197 -LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 254
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 255 VARIFNTFG--PRMHMNDGRVVSNFIL 279
Score = 64 (27.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 277 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 323
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + +KA+ L W+ ++
Sbjct: 324 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIKKAKLMLGWEPVVPLE 381
Query: 324 E 324
E
Sbjct: 382 E 382
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 181 (68.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 87/343 (25%), Positives = 136/343 (39%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGN-NMTF 59
KNIL+ G G+I SH +L+ YK VV+D LD S + K L + + N F
Sbjct: 7 KNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNL-----KNLNPSKSSPNFKF 61
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
K D+ + + + D ++HFA V S + NN+ GT LLE
Sbjct: 62 VKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 120 G-CKNLVFSSSATAYGWPKV---VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWK 175
G + + S+ YG V E L NPY +K E + RS
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LP 180
Query: 176 IILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+I R N G P P L+P +A+ +P L + G DG+ VR
Sbjct: 181 VITTRGNNVYG---------PNQFPEKLIPKFILLAMNGKP-LPIHG------DGSNVRS 224
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAA-FEKASGKKIPLVKSG 294
Y++ D+A+ L K + V + + V ++ F I V++
Sbjct: 225 YLYCEDVAEAFEVVLHKGEVNHV-YNIGTTRERRVIDVANDISKLFGIDPDSTIQYVEN- 282
Query: 295 RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337
RP + + + +K ++ L W + +E R W ++NP
Sbjct: 283 -RPFNDQRYFLDDQKLKK-LGWCERTNWEEGLRKTMEWYTENP 323
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 176 (67.0 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 67/239 (28%), Positives = 101/239 (42%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
AK +LV GG G+I SH ++ L+ Y ++ NLD A K E + N F +
Sbjct: 17 AKRVLVTGGAGFIASHMIVSLV-EDYPNYMIINLDKLDYCASLKNLETISNK-QNYKFIQ 74
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D ++++F K D V+HFA V S + + N+ GT L V AAH
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVL--VSAAHEA 132
Query: 122 K--NLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
+ ++ S+ YG E P Q NPY SK E C S W+
Sbjct: 133 RVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAE--CF----VQSYWE---- 182
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
+Y PV S P P ++P F++ + R+ + GT T++ D +
Sbjct: 183 QYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRK--CCIHGTGLQTRNFLYATDVV 239
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 156 (60.0 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 83 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 137
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 138 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 190
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P +E++ P+ Y K E +C + + ++
Sbjct: 191 -LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 248
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 249 VARIFNTFG--PRMHMNDGRVVSNFIL 273
Score = 62 (26.9 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265
F+ Q G P LTV+G+ G+ R + +V DL +G +A + V V NL
Sbjct: 271 FILQALQGE-P-LTVYGS------GSQTRAFQYVSDLVNGLVALMNS----NVSSPV-NL 317
Query: 266 GTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGID 323
G + ++LE + SG +I + + D + KA+ L W+ ++
Sbjct: 318 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ--DDPQKRKPDIRKAKMMLAWEPVVPLE 375
Query: 324 E 324
E
Sbjct: 376 E 376
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 174 (66.3 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 72/244 (29%), Positives = 106/244 (43%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLL-LGGYKTVVVDNLDNASEIAVAKVKELAGYQGN-NMT 58
M ++LV G G+IGS V LL GG VVV LD A A LA +G+
Sbjct: 1 MTTHLLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALD-ALTYA-GNPDNLAAVRGHPRYR 58
Query: 59 FHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA 118
F + D+ D V+ AG D V+H A V S+ + N+ GT TLL+
Sbjct: 59 FERGDICDAPGRRVM-AGQ--DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATR 115
Query: 119 HGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
HG + V S+ YG + TE+ PL+ +PY SK ++ H + +
Sbjct: 116 HGVASFVQVSTDEVYGSLEHGSWTEDEPLRPNSPYSASKAS-GDLLALAHHVSHGLDVRV 174
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
R N G PR P L+P F+T + G R L +G + ++ V D++
Sbjct: 175 TRCSNNYG---------PRQFPEKLIPRFITLLMDGHRVPL--YGDGLNVREWLHVDDHV 223
Query: 238 HVVD 241
++
Sbjct: 224 RGIE 227
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 86/343 (25%), Positives = 133/343 (38%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKEL-AGYQGNNMTF 59
KNIL+ G G+I SH +L+ YK VV+D LD S + K L N F
Sbjct: 7 KNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNL-----KNLNPSKHSPNFKF 61
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
K D+ + + D ++HFA V S + NN+ GT LLE
Sbjct: 62 VKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
Query: 120 G-CKNLVFSSSATAYGWPK---VVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWK 175
G + + S+ YG +V E L NPY +K E + RS
Sbjct: 122 GQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LP 180
Query: 176 IILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+I R N G P P L+P +A+ R L + G DG+ VR
Sbjct: 181 VITTRGNNVYG---------PNQFPEKLIPKFILLAM-RGQVLPIHG------DGSNVRS 224
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAA-FEKASGKKIPLVKSG 294
Y++ D+A+ L K + V + + V + + F I V +
Sbjct: 225 YLYCEDVAEAFEVVLHKGEVGHV-YNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDN- 282
Query: 295 RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337
RP + + + +K ++ L W + +E + +W ++NP
Sbjct: 283 -RPFNDQRYFLDDQKLKK-LGWSERTTWEEGLKKTMDWYTQNP 323
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 65/239 (27%), Positives = 100/239 (41%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
AK +LV GG G+I SH ++ L+ Y ++ NLD A K E + N F +
Sbjct: 17 AKRLLVTGGAGFIASHVIVSLV-EDYPNYMIINLDKLDYCASLKNLETISNK-QNYKFIQ 74
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ + ++++F K D V+HFA V S + + N+ GT L V AAH
Sbjct: 75 GDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVL--VSAAHEA 132
Query: 122 K--NLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
+ ++ S+ YG E P Q NPY SK E C S W+
Sbjct: 133 RVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAE--CF----VQSYWE---- 182
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
RY P S P P ++P F++ + R+ + G+ T++ D +
Sbjct: 183 RYKFPAVITRSSNVYGPHQYPEKVIPKFISLLQHNRK--CCIHGSGLQTRNFLYATDVV 239
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/152 (26%), Positives = 74/152 (48%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 86
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 87 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139
Query: 123 NLVFSSSATAYGWPKVVPCTEEFPLQAMNPYG 154
L+ +S++ YG P+V P +E++ +NP G
Sbjct: 140 -LLLASTSEVYGDPEVHPQSEDY-WGHVNPIG 169
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 65/275 (23%), Positives = 118/275 (42%)
Query: 56 NMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEV 115
N+ LD+ D ++ V + K D + H A +V +S F N+ GT+ +L+
Sbjct: 40 NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDA 99
Query: 116 MAAHG--CKNLVFSSSATAYGW--PKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD 171
+ C+ L SS YG P+ P +EE L+ M+PYG SK + + R ++
Sbjct: 100 VRDSNLDCRILTIGSSEE-YGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY 158
Query: 172 SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGT 231
II R FN +G P G+ + + + + + ++ + G + +D T
Sbjct: 159 G-MDIIHTRTFNHIG--P---GQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFT 212
Query: 232 VVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP-- 289
VRD + L + K G +VYN+ +G GT + +++ + KI
Sbjct: 213 DVRDIVQAYWLLSQY---------GKTG-DVYNVCSGIGTRIQDVLDLLLAMANVKIDTE 262
Query: 290 LVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDE 324
L RP + + S ++ + WK + +++
Sbjct: 263 LNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEK 297
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 163 (62.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 90/349 (25%), Positives = 148/349 (42%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAV-AKVKELAGYQGNNMTFHK 61
KNI+V GG G+IGS+ V + + V V LD + A ++E+ G + +
Sbjct: 5 KNIIVTGGAGFIGSNFV-HYVYNNHPDVHVTVLDKLTYAGNRANLEEILG---DRVELVV 60
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
D+ D ++ + A K DA++H+A S++ P P+ N GT LLE +
Sbjct: 61 GDIADSELVDKLAA--KADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDI 118
Query: 122 KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWK----II 177
+ S+ YG +P E+ P P + F E + S K +I
Sbjct: 119 R-FHHVSTDEVYG---DLPLREDLPGHGEGP---GEKFTAETKYNPSSPYSSTKAASDLI 171
Query: 178 LLRYFNPVGAHPS-GKGEDPRGIPNNLMPFV----TQVAVGRRPALTVFGTDYSTKDGTV 232
+ + G + + G ++ F+ T + G +P L +G +G
Sbjct: 172 VKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKL--YG------EGKN 223
Query: 233 VRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGT-GKGTS--VLEMVAAFEKASGKKIP 289
VRD+IH D + G A L K ++G E Y +G G+ + VLE++ EK S K
Sbjct: 224 VRDWIHTNDHSTGVWAILTK---GRIG-ETYLIGADGEKNNKEVLELI--LEKMSQPKNA 277
Query: 290 LVKSGRRPGDAEIVYA-STEKAERELNWKAKY-GIDEMCRDQWNWASKN 336
R G ++ YA + K EL WK ++ +E D W +++
Sbjct: 278 YDHVTDRAGH-DLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 162 (62.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 83/345 (24%), Positives = 134/345 (38%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K +LV GG G+I SH V+ L+ Y ++ NLD A K E + N F +
Sbjct: 23 KRLLVTGGAGFIASHVVVSLVRN-YPNYLIINLDKLDYCASLKNLETVS-EKENYKFIQG 80
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH--G 120
D+ + ++ +F K D V+HFA V S L + N+ GT L V AAH
Sbjct: 81 DICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVL--VAAAHEAN 138
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
+ V+ S+ YG E P NPY SK E C S W+ R
Sbjct: 139 VEKFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAE--CF----VQSYWE----R 188
Query: 181 YFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH- 238
Y PV S P P ++P F++ + R+ + G+ ++ D +
Sbjct: 189 YQFPVVITRSSNVYGPHQYPEKVIPKFISLLQQNRK--CCIHGSGLQRRNFLYATDVVEA 246
Query: 239 -VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP 297
+ L +G + + E+ + K L + E + VK RP
Sbjct: 247 FLTVLKEGKPGEIYNIG---TNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKD--RP 301
Query: 298 GDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342
+ ++ Y + + L W+ K E + W +N + +++
Sbjct: 302 TN-DLRYPMSSEKMHNLGWRPKVPWKEGIKKTIEWYKENFHNWKN 345
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 66/235 (28%), Positives = 98/235 (41%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLR 65
LV G G+IGS V +LL G+ V LDN + ++ LA + F + D+
Sbjct: 4 LVTGAAGFIGSTLVDRLLADGHSVV---GLDNFATGRATNLEHLADNSAH--VFVEADIV 58
Query: 66 DKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDN--NLTGTITLLEVMAAHGCKN 123
A L + + + V H A V SV P FD N+ GT+ L E G +
Sbjct: 59 T-ADLHAILEQHRPEVVFHLAAQIDVRRSVADP--QFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 124 LVFSSSA-TAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYF 182
+V +SS + YG P P E P +PY K+ EI + R + L
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKV-AGEIYLNTFRH-----LYGLDCS 169
Query: 183 NPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
+ A+ G +DP G ++ Q + +P VFG +T+D V D +
Sbjct: 170 HIAPANVYGPRQDPHG-EAGVVAIFAQALLSGKPT-RVFGDGTNTRDYVFVDDVV 222
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 69/240 (28%), Positives = 106/240 (44%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG G+IG++ V L L +T + LD + A +E + + + D+
Sbjct: 3 LLVTGGAGFIGANFV-HLALREARTSSITVLD---ALTYAGSRESLAPVADRIRLVQGDI 58
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
D A + + A + DAV+HFA V ++ P P+ +N+ GT T+LE + H + L
Sbjct: 59 TDAALVGDLVAES--DAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVR-L 115
Query: 125 VFSSSATAYGWPKVV-PC--TEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
S+ YG ++ P E P +PY +K + + R RS + +
Sbjct: 116 HHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGV-RATISNC 174
Query: 182 FNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241
N G + + PR I N V GRRP L +G G VRD+IHV D
Sbjct: 175 SNNYGPYQHVEKFIPRQITN--------VLTGRRPKL--YGA------GANVRDWIHVDD 218
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 153 (58.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 78/306 (25%), Positives = 126/306 (41%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
++LV+GG G++GSH ++++LL YK V +D + + + G Q +H D
Sbjct: 12 SVLVVGGCGFLGSH-IVRMLLDDYKCSAVSAVD----LRCTRNRR-EGVQ-----YHDAD 60
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
+ + L VF + D VIH A A G SV ++ N+ GT T++E G K
Sbjct: 61 ITNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAGVKA 120
Query: 124 LVFSSSATAYG--WPKVVPCTEEFPL----QAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
LVF+SSA+ ++ E +P+ + Y +K EEI V +++ K+
Sbjct: 121 LVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEI---VLKANEPGKL- 176
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
L P G G + +V VG L F Y+ G V ++
Sbjct: 177 LTAAIRPSGIFGEGDSMVTANLVKTYREGKWKVQVGDNNNL--FDFTYA---GNVAHAHL 231
Query: 238 HVVD-LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR 296
L + A + LD +V EV+ + + +A+G + L K
Sbjct: 232 LAARALLVTYSAKTQPLDHERVDGEVFLITNDSPVYFWDFARLVYRAAGNQAGLDKVWVL 291
Query: 297 PGDAEI 302
P D I
Sbjct: 292 PRDVGI 297
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 47/190 (24%), Positives = 86/190 (45%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH +L++ G++ VVDN + V+ G++ + H
Sbjct: 87 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---RNVEHWIGHENFELINH-- 141
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GT+ +L + G +
Sbjct: 142 DVVEPLYIEV-------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 194
Query: 123 NLVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKII 177
L+ +S++ YG P+V P E++ P+ Y K E +C + + ++
Sbjct: 195 -LLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVR 252
Query: 178 LLRYFNPVGA 187
+ R FN G+
Sbjct: 253 VARIFNTFGS 262
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 58/252 (23%), Positives = 104/252 (41%)
Query: 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVV 139
D + H A + + P+ N GT+ +L + G + L+ +S++ YG P+V
Sbjct: 152 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR-LLLASTSEVYGDPEVH 210
Query: 140 PCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGE 194
P E++ P+ Y K E +C + + ++ + R FN G+
Sbjct: 211 PQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV-EVRVARIFNTFGSRMHMN-- 267
Query: 195 DPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLD 254
D R + N F+ Q G ALTV+G+ G+ R + +V DL +G ++ +
Sbjct: 268 DGRVVSN----FILQALQGE--ALTVYGS------GSQTRAFQYVSDLVNGLVSLMNS-- 313
Query: 255 DPKVGCEVYNLGTGKGTSVLEMVAAFEK--ASGKKIPLVKSGRRPGDAEIVYASTEKAER 312
+ V NLG + ++LE + AS I + + D + KA+
Sbjct: 314 --NISSPV-NLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQ--DDPQRRRPDIRKAKL 368
Query: 313 ELNWKAKYGIDE 324
L W+ ++E
Sbjct: 369 LLGWEPVVPLEE 380
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 149 (57.5 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 63/263 (23%), Positives = 107/263 (40%)
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLE-VMAA 118
H+ DLRD A++ + + ++H A + ++ P + N L E V+A
Sbjct: 51 HRCDLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLAC 110
Query: 119 HGCKNLVFSSSATAYG--WPKVVPCTEE-FPLQAMNPYGRSKLFIEEICRDVHRSDSEWK 175
LVF+ S+ +YG + V E L+ + PY +K ++ R+D
Sbjct: 111 SPHAVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKA-AADVALGQMRNDG-LN 168
Query: 176 IILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
+ R FN H +G G+ P + + + Q+ G P + G D +RD
Sbjct: 169 AVRFRAFN----H-TGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGN----LDA--MRD 217
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR 295
++ V D+ G+ AL DP V V+NL +G S+ ++ +G I +
Sbjct: 218 FVDVRDVVRGYRLALETELDP-VSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPA 276
Query: 296 --RPGDAEIVYASTEKAERELNW 316
R D + +A EL W
Sbjct: 277 KLRKNDVPRTWGDANRARTELGW 299
Score = 131 (51.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 56/245 (22%), Positives = 102/245 (41%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
+ IL+ G G++G + + +L+ GY+ + L ++ A+ G H+
Sbjct: 4 RRILITGANGFVGGYMIRELVAAGYQHSELHTLT----VSGAEQSLRIGQA------HRC 53
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLE-VMAAHGC 121
DLRD A++ + + ++H A + ++ P + N L E V+A
Sbjct: 54 DLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPH 113
Query: 122 KNLVFSSSATAYG--WPKVVPCTEE-FPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
LVF+ S+ +YG + V E L+ + PY +K ++ R+D +
Sbjct: 114 AVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKA-AADVALGQMRNDG-LNAVR 171
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
R FN H +G G+ P + + + Q+ G P + G + +D VRD +
Sbjct: 172 FRAFN----H-TGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDVVR 226
Query: 239 VVDLA 243
LA
Sbjct: 227 GYRLA 231
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 69/240 (28%), Positives = 106/240 (44%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+LV GG G+IG++ V + + V LD A A + + LA + + + + D+
Sbjct: 3 LLVTGGAGFIGTNFV-HSAVREHPDDAVTVLD-ALTYA-GRRESLADVE-DAIRLVQGDI 58
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
D + + A + DAV+HFA V ++ P P+ N+ GT T+LE + HG + L
Sbjct: 59 TDAELVSQLVAES--DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVR-L 115
Query: 125 VFSSSATAYGWPKV---VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181
S+ YG ++ TE P +PY +K + + R RS + +
Sbjct: 116 HHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGV-RATISNC 174
Query: 182 FNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241
N G + + PR I N V GRRP L +G G VRD+IHV D
Sbjct: 175 SNNYGPYQHVEKFIPRQITN--------VLTGRRPKL--YGA------GANVRDWIHVDD 218
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 149 (57.5 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 68/248 (27%), Positives = 107/248 (43%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
ILV GG G+IGSH V +L+ V+V DN S+ +K+ G+ + H D
Sbjct: 33 ILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSK---DNLKKWIGHPRFELIRH--D 87
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
+ + +EV D + H A + P+ N+ GT+ +L + G +
Sbjct: 88 VTEPLFVEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR- 139
Query: 124 LVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
++ +S++ YG P V P TE + P+ + Y K E + D HR +I +
Sbjct: 140 ILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI-EIRI 198
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
R FN G P +D R + N F+ Q G ALTV T+ V D +
Sbjct: 199 ARIFNTYG--PRMNIDDGRVVSN----FIAQALRGE--ALTVQKPGTQTRSFCYVSDMVE 250
Query: 239 -VVDLADG 245
++ L +G
Sbjct: 251 GLMRLMEG 258
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 148 (57.2 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 66/244 (27%), Positives = 104/244 (42%)
Query: 3 KNILVIGGVGYIGSHTVLQLL--LGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
K I+V GG G+IG H + ++ + +D L+ AS +++ L + +N F
Sbjct: 7 KRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASN--ATEIENLKSF--SNFEFV 62
Query: 61 KLDLRDKAALEVVFAGTKFDA-VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
LDL D LE + TK +I+FA +V S + P+ + NN+ T LLE +
Sbjct: 63 HLDLSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLN 120
Query: 120 -GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
+ S+ YG E + NPY SK I+ I + S + I +
Sbjct: 121 PSIGYFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYS-YKLPITI 179
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
LR N G P P ++P Q ++P + V G GT R Y++
Sbjct: 180 LRPNNVYG---------PLQYPEKIIPLTIQCINEKKP-IPVHGK------GTNKRKYLY 223
Query: 239 VVDL 242
V+D+
Sbjct: 224 VLDI 227
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 148 (57.2 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 66/244 (27%), Positives = 104/244 (42%)
Query: 3 KNILVIGGVGYIGSHTVLQLL--LGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
K I+V GG G+IG H + ++ + +D L+ AS +++ L + +N F
Sbjct: 7 KRIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASN--ATEIENLKSF--SNFEFV 62
Query: 61 KLDLRDKAALEVVFAGTKFDA-VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
LDL D LE + TK +I+FA +V S + P+ + NN+ T LLE +
Sbjct: 63 HLDLSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLN 120
Query: 120 -GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
+ S+ YG E + NPY SK I+ I + S + I +
Sbjct: 121 PSIGYFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYS-YKLPITI 179
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
LR N G P P ++P Q ++P + V G GT R Y++
Sbjct: 180 LRPNNVYG---------PLQYPEKIIPLTIQCINEKKP-IPVHGK------GTNKRKYLY 223
Query: 239 VVDL 242
V+D+
Sbjct: 224 VLDI 227
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 79/345 (22%), Positives = 139/345 (40%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGG---YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK 61
+ + G G +GSH LL G Y T +D S++ Q N +
Sbjct: 3 VWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTID-PSDL-----------QFNGA---E 47
Query: 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA-AHG 120
+D+ D ++ A + DAV H A S +P+ N+ GT + E +
Sbjct: 48 VDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRP 107
Query: 121 CKNLVFSSSATAYGW--PKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
++ + S+ YG+ P VP E L+ ++PYG SK + + H+S ++
Sbjct: 108 HAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVA 167
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA-VGRRPALTVFGT-DYSTKDGTVVRDY 236
R FN G PR + + L FV + + P + + TK R
Sbjct: 168 -RIFNCTG---------PRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTK-----RT- 211
Query: 237 IHVVDLADGHIAALRKLDDPKVGCEVY---NLGTGKGTSVLEMVAAFEKASGKKIPLVKS 293
+VD+ D + A + LD + G + ++ G + +++AA ++ +P V
Sbjct: 212 --IVDVRDLNRALMLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDD--IVPEVDP 267
Query: 294 GR-RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWN-WASKN 336
RP D +I+Y K W+ + + + D ++ W SK+
Sbjct: 268 ALLRPTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKS 312
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLP--YFDNNLTGTITLLEV 115
T +LDL ++ +E FA K VI A K G P + NL ++
Sbjct: 51 THSELDLTSQSDVESFFATEKPVYVI-LAAAKVGGIHANNTYPADFIGVNLQIQTNVIHS 109
Query: 116 MAAHGCKNLVFSSSATAYGW--PKVVPCTEEF--PLQAMNP-YGRSKLFIEEICRDVHRS 170
HG K L+F S+ Y P+ +P + PL+ N Y +K+ ++C+ +R
Sbjct: 110 AYTHGVKKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQ-AYRL 168
Query: 171 DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230
+W I N G + + E+ +P LM + + V+G+ G
Sbjct: 169 QHQWDAISGMPTNLYGQNDNFHPENSHVLPA-LMRRFHEAKANNADEVVVWGS------G 221
Query: 231 TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL 290
+ +R+++HV DLAD + + D G E N+G+G ++ E+ ++ G K L
Sbjct: 222 SPLREFLHVDDLADACVFLM----DQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKL 277
Query: 291 VKSGRRP-GDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336
V +P G + S++ A L W K + + + W +N
Sbjct: 278 VWDTTKPDGTPRKLMDSSKLAS--LGWTPKISLKDGLSQTYEWYLEN 322
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 59/239 (24%), Positives = 111/239 (46%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH-KL- 62
+ + GG G+IGS L L ++ +++D + +++ ++ G+ N + F +L
Sbjct: 3 VAITGGAGFIGSQLALNLQ-EKHEILIIDKMRSSATFENGNLQSF-GHFKNLLEFDGELF 60
Query: 63 --DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
D+ D+ L+ + K + + H A + +V NL +E+
Sbjct: 61 AGDINDEKVLKKI-EDFKPEIIFHQAAISDT--TVFDQTKVLQTNLNTFKDFIELSIDLN 117
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
K L+++SSA+ YG K P T + NPY SKL ++++ + + + ++ LR
Sbjct: 118 AK-LIYASSASVYGDAKS-PQTVGKDEEPKNPYAFSKLMMDKLAKKYY---DKAHLVGLR 172
Query: 181 YFNPVGAHPSGKGEDPRG-IPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
YFN G KGE + + ++ F Q+ G+ P L G+D +D T ++D I+
Sbjct: 173 YFNVYG-----KGEFYKNKTASMVLQFGHQILAGKNPRLFE-GSDQIYRDFTYIKDVIN 225
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 79/352 (22%), Positives = 156/352 (44%)
Query: 2 AKNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAG----YQGNN 56
A+ + +I G+ G GS+ LL GYK + + +S A+++ L + G++
Sbjct: 49 ARKVALITGISGQDGSYLAELLLSKGYKVHGI--IRRSSSFNTARIEHLYSNPITHHGDS 106
Query: 57 -MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEV 115
+ H D+ D + L + + + V H A V S P + + GT+ LL+
Sbjct: 107 SFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD- 165
Query: 116 MAAHGCK---NLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRS 170
A H C+ + F ++T+ YG + +P +E+ P +PY +K++ I + +
Sbjct: 166 -AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREA 224
Query: 171 DSEWKI--ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228
+ + IL + +P +GE + + V ++++G++ ++ + G + +
Sbjct: 225 YNMFACNGILFNHESP------RRGET--FVTRKITRSVAKISLGQQESIEL-GNLSALR 275
Query: 229 DGTVVRDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEK 282
D R+Y+ + D D + A K + C NL + VL+ +
Sbjct: 276 DWGHAREYVEAMWRILQHDSPDDFVIATGKQFSVREFC---NLAFAEIGEVLQWEGEGVE 332
Query: 283 ASGKK---IPLVK-SGR--RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
GK + VK S + RP + E + + EKA++ L W+AK + E+ ++
Sbjct: 333 EVGKNKDGVIRVKVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKE 384
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 79/352 (22%), Positives = 156/352 (44%)
Query: 2 AKNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAG----YQGNN 56
A+ + +I G+ G GS+ LL GYK + + +S A+++ L + G++
Sbjct: 49 ARKVALITGISGQDGSYLAELLLSKGYKVHGI--IRRSSSFNTARIEHLYSNPITHHGDS 106
Query: 57 -MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEV 115
+ H D+ D + L + + + V H A V S P + + GT+ LL+
Sbjct: 107 SFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD- 165
Query: 116 MAAHGCK---NLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRS 170
A H C+ + F ++T+ YG + +P +E+ P +PY +K++ I + +
Sbjct: 166 -AIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREA 224
Query: 171 DSEWKI--ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228
+ + IL + +P +GE + + V ++++G++ ++ + G + +
Sbjct: 225 YNMFACNGILFNHESP------RRGET--FVTRKITRSVAKISLGQQESIEL-GNLSALR 275
Query: 229 DGTVVRDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEK 282
D R+Y+ + D D + A K + C NL + VL+ +
Sbjct: 276 DWGHAREYVEAMWRILQHDSPDDFVIATGKQFSVREFC---NLAFAEIGEVLQWEGEGVE 332
Query: 283 ASGKK---IPLVK-SGR--RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
GK + VK S + RP + E + + EKA++ L W+AK + E+ ++
Sbjct: 333 EVGKNKDGVIRVKVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKE 384
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 84/339 (24%), Positives = 141/339 (41%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
KN+++ GG G+IGS+ V + + T N+D I + + +A N+ + +
Sbjct: 6 KNVVITGGCGFIGSNFV-NYIHDAWPTCNFVNIDKL--ILNSDTQNVAESVRNSPRYKLV 62
Query: 63 --DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
D++++AA+ VF + D VIHFA + NN+ I LE + +G
Sbjct: 63 LTDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYG 122
Query: 121 -CKNLVFSSSATAYGWPKVVPCTE---EFP-LQAMNPYGRSKLFIEEICRDVHRSDSEWK 175
K V S+ YG + + EF L NPY +K+ E R +++
Sbjct: 123 KIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVR-AYQTQYNLP 181
Query: 176 IILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
I+ R N G + D + +P F+ V R T+ G+ G +R
Sbjct: 182 IVTARMNNIYGPNQW----DVKVVPR----FIEIAKV--RGEYTIQGS------GKQLRS 225
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI------P 289
++ V D + G A K + E+YNLGT +V ++ ++ ++ P
Sbjct: 226 WLFVDDASAGLKAVCEKGELH----EIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPP 281
Query: 290 LVKS-GRRPGDAEIVYASTEKAERELNWKAKYGIDEMCR 327
KS RP + S EKA+ +L W+ D+ R
Sbjct: 282 KYKSIPDRPYNDLRYLISIEKAKNDLGWEPTTSFDDGMR 320
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 66/249 (26%), Positives = 107/249 (42%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
IL+ GG G+IGSH V +L+ VVV DN S+ +K+ G+ + H D
Sbjct: 47 ILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSK---ENLKKWIGHPRFELIRH--D 101
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
+ + +EV D + H A + P+ N+ GT+ +L + G +
Sbjct: 102 VTEPLLIEV-------DRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR- 153
Query: 124 LVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
++ +S++ YG P + P E + P+ + Y K E + D HR +I +
Sbjct: 154 ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI-EIRI 212
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
R FN G P +D R + N F+ Q G ALTV T+ V D +
Sbjct: 213 ARIFNTYG--PRMNIDDGRVVSN----FIAQALRGE--ALTVQKPGTQTRSFCYVSDMVD 264
Query: 239 -VVDLADGH 246
++ L +G+
Sbjct: 265 GLIRLMEGN 273
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/232 (24%), Positives = 94/232 (40%)
Query: 98 PLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEF-----PLQAMNP 152
P+ N+ GT+ +L + G + ++ +S++ YG P + P E + P+ +
Sbjct: 129 PVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSC 187
Query: 153 YGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAV 212
Y K E + D HR +I + R FN G P +D R + N F+ Q
Sbjct: 188 YDEGKRVAETLMFDYHRQHGI-EIRIARIFNTYG--PRMNIDDGRVVSN----FIAQALR 240
Query: 213 GRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272
G ALTV K GT R + +V D+ DG I + D + N+G +
Sbjct: 241 GE--ALTV------QKPGTQTRSFCYVSDMVDGLIRLMEGNDTGPI-----NIGNPGEFT 287
Query: 273 VLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDE 324
++E+ ++ I + P D KA+ L W+ K + E
Sbjct: 288 MVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLRE 339
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 143 (55.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 58/228 (25%), Positives = 105/228 (46%)
Query: 105 NLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEIC 164
NL +++ A G K +++SS++ YG + TEE PL + Y + K E +
Sbjct: 98 NLEAFEPMVKAAKAAGVKRFIYASSSSVYGVSETKDVTEEHPLVPLTLYNKYKGMCEPLL 157
Query: 165 RDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224
H+S E+ + +R G P + + + N++ T AV +TVFG
Sbjct: 158 FK-HQSP-EFVCVTIRPATLCGYAPRQRLD----LSVNIL---TNHAVNNNK-ITVFG-- 205
Query: 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAF---- 280
G+ +R +HV D+ D + L + D K+ E +N+G + S++E+
Sbjct: 206 -----GSQLRPNLHVQDMCDLY-KLLLVVPDEKIAGETFNVGY-ENKSIMEIAHIVKNIV 258
Query: 281 EKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
E+ +K P+ D + +++K +R L ++AKY I++ RD
Sbjct: 259 EEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRCLGFEAKYSIEDAVRD 306
Score = 132 (51.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 51/176 (28%), Positives = 75/176 (42%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
ILV GG GY+GS V QLL GY+ V D L + + L +G D+
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTLFFGDDFLPKENPYLNIVEG--------DI 59
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
RD L+ F DAVI A + NL +++ A G K
Sbjct: 60 RDTERLKQCFKDA--DAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRF 117
Query: 125 VFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
+++SS++ YG + TEE PL + Y + K E + H+S E+ + +R
Sbjct: 118 IYASSSSVYGVSETKDVTEEHPLVPLTLYNKYKGMCEPLLFK-HQSP-EFVCVTIR 171
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 82/336 (24%), Positives = 139/336 (41%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELA--GYQ-GNNMTF 59
K L+ G G GS+ LL GY+ V + AS +++ L +Q G +
Sbjct: 2 KRALITGITGQDGSYLAELLLAKGYE--VHGLIRRASTFNTSRIDHLYVDPHQPGARLFL 59
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEV--MA 117
H DL D L + + + D V + A V S +P+ D G++ LLE ++
Sbjct: 60 HYGDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLS 119
Query: 118 AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKI- 176
C+ +SS+ +G P E P +PYG +K++ R+ + + +
Sbjct: 120 RVHCR-FYQASSSEMFG-ASPPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVN 177
Query: 177 -ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235
IL + +P +GE + + V ++ G + + + D VRD
Sbjct: 178 GILFNHESP------RRGET--FVTRKITRAVARIKAGIQSEVYMGNLD-------AVRD 222
Query: 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMV-AAFEKASGKKIPLVKSG 294
+ + + +G L+ D+P + + L TG+G +V E AAFE A VK
Sbjct: 223 WGYAPEYVEGMWRMLQT-DEP----DDFVLATGRGFTVREFARAAFEHAGLDWQQYVKFD 277
Query: 295 RR---PGDAEIVYASTEKAERELNWKAKYGIDEMCR 327
+R P + + + KA L W+A DE+ R
Sbjct: 278 QRYLRPTEVDSLIGDATKAAELLGWRASVHTDELAR 313
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/207 (24%), Positives = 90/207 (43%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH V L++ G++ +VVDN + V+ G++ + H
Sbjct: 116 KRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRK---RNVEHWLGHENFELIHH-- 170
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +E+ D + H A + + P+ N GTI +L +A
Sbjct: 171 DIVNPLFIEI-------DEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLG-LAKRVMA 222
Query: 123 NLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLF-----IEEICRDVHRSDSEWKII 177
++ +S++ YG P V P E + +NP G + + E + + ++
Sbjct: 223 KVLIASTSEVYGDPTVHPQPETY-WGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVR 281
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPNNLM 204
+ R FN G P D R + N ++
Sbjct: 282 VARIFNTYG--PRMHMNDGRVVSNFIL 306
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 57/251 (22%), Positives = 98/251 (39%)
Query: 78 KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPK 137
+ D + H A + + P+ N GTI +L +A ++ +S++ YG P
Sbjct: 179 EIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLG-LAKRVMAKVLIASTSEVYGDPT 237
Query: 138 VVPCTEEFPLQAMNPYGRSKLF-----IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK 192
V P E + +NP G + + E + + ++ + R FN G P
Sbjct: 238 VHPQPETY-WGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYG--PRMH 294
Query: 193 GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRK 252
D R + N F+ Q R +TV+G +G R + +V DL DG IA +
Sbjct: 295 MNDGRVVSN----FILQAL--RNETITVYG------NGKQTRSFQYVSDLVDGMIALMAS 342
Query: 253 LDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAER 312
V NLG ++ E +K G + +S D + +A +
Sbjct: 343 NYTQPV-----NLGNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQ 397
Query: 313 ELNWKAKYGID 323
L+W+ K ++
Sbjct: 398 LLHWEPKVPLE 408
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 53/204 (25%), Positives = 90/204 (44%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
K IL+ GG G++GSH V +L+L G++ + +DN + V+ G+ M H
Sbjct: 137 KRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRK---KNVEHWIGHPNFEMVHH-- 191
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
D+ + +EV D + H A + + P+ N GTI +L +A
Sbjct: 192 DVVNPYFVEV-------DQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLG-LAKRVKA 243
Query: 123 NLVFSSSATAYGWPKVVPCTEEF--PLQAMNP---YGRSKLFIEEICRDVHRSDSEWKII 177
++ +S++ YG P+V P E + + + P Y K E + ++ ++ KI
Sbjct: 244 TVLLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENI-KIR 302
Query: 178 LLRYFNPVGAHPSGKGEDPRGIPN 201
+ R FN G P D R + N
Sbjct: 303 IARIFNTFG--PRMHMNDGRVVSN 324
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 141 (54.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 78/305 (25%), Positives = 127/305 (41%)
Query: 43 VAKVKELAGYQGNNMTFH-KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLP- 100
V K++E G+ + H +LDL +A +E F+ K VI A K G P
Sbjct: 33 VRKLQE-QGFTNLVLKTHAELDLTRQADVESFFSQEKPVYVI-LAAAKVGGIHANNTYPA 90
Query: 101 -YFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVP--CTEEFPLQA-MNP---- 152
+ NL ++ HG K L+F S+ Y PK P E L A + P
Sbjct: 91 DFIGVNLQIQTNVIHSAYEHGVKKLLFLGSSCIY--PKFAPQPIPESALLTASLEPTNEW 148
Query: 153 YGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAV 212
Y +K+ + C+ +R W I N G + + E+ +P LM + V
Sbjct: 149 YAIAKIAGIKTCQ-AYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLPA-LMRRFHEAKV 206
Query: 213 GRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272
+ V+GT G+ +R+++HV DLAD + L D G E N+G+G+ +
Sbjct: 207 NGAEEVVVWGT------GSPLREFLHVDDLADACVFLL----DRYSGLEHVNIGSGQEVT 256
Query: 273 VLEMVAAFEKASGKKIPLVKSGRRP-GDAEIVYASTEKAERELNWKAKYGIDEMCRDQWN 331
+ E+ ++ G + L +P G + S++ A L W K + + ++
Sbjct: 257 IRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLAS--LGWTPKVSLRDGLSQTYD 314
Query: 332 WASKN 336
W KN
Sbjct: 315 WYLKN 319
Score = 37 (18.1 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVV 32
I V G G +GS V +L G+ +V+
Sbjct: 19 IFVAGHRGLVGSAIVRKLQEQGFTNLVL 46
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 141 (54.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 77/345 (22%), Positives = 133/345 (38%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTF 59
M K L+ G G +GS LL Y+ + + + + + + + F
Sbjct: 1 MKKTALITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMD-NIYHLSDRINKKDRISIF 59
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLE----V 115
+ DL D ++L+ +F + D + H A S P+ N+ GT +LE +
Sbjct: 60 YA-DLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRIL 118
Query: 116 MAAHGCKNLVF-SSSATAYGWPKV-VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
A G +V SS+ YG KV + E+ +PY SK+ + + R + +
Sbjct: 119 KAKDGYDPVVHVCSSSEVYGRAKVGIKLNEDTTFHGASPYSISKIGTDYLGRFYGEAYN- 177
Query: 174 WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVG-RRPALTVFGTDYSTKDGTV 232
+ + +G H SG + + + + G + P + V G S +
Sbjct: 178 ----IRTFVTRMGTH-SGPRRSDVFFESTVAKQIALIETGYQEPVIKV-GNLSSVRTFQD 231
Query: 233 VRDYIHVVDLADGHIAALRKLDDPKVGC-EVYNLG---TGKGTSVLEMVAAFEKASGKKI 288
RD I ++ +L KV C E +N+ K V+E++ +F KI
Sbjct: 232 ARDAIRAY-----YLLSLES-QKGKVPCGEAFNIAGEEAFKLPEVIEILLSFSTRKDIKI 285
Query: 289 PLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWN-W 332
+ RP DA+ K + +NWK + +M D N W
Sbjct: 286 EQDEERLRPIDADYQMFDNTKIKSFINWKPEIAARKMFEDLLNHW 330
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 140 (54.3 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 65/248 (26%), Positives = 106/248 (42%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
IL+ GG G+IGSH V +L+ V+V DN S+ +K+ G+ + H D
Sbjct: 31 ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSK---DNLKKWIGHPRFELIRH--D 85
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
+ + +EV D + H A + P+ N+ GT+ +L + G +
Sbjct: 86 VTEPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR- 137
Query: 124 LVFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
++ +S++ YG P + P E + P+ + Y K E + D HR +I +
Sbjct: 138 ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI-EIRI 196
Query: 179 LRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238
R FN G P +D R + N F+ Q G ALTV T+ V D +
Sbjct: 197 ARIFNTYG--PRMNIDDGRVVSN----FIAQALRGE--ALTVQKPGTQTRSFCYVSDMVD 248
Query: 239 -VVDLADG 245
++ L +G
Sbjct: 249 GLMRLMEG 256
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 140 (54.3 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 79/346 (22%), Positives = 144/346 (41%)
Query: 3 KNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNN 56
+N+ +I G+ G GS+ LL GY+ + + +S +++ L A +GN
Sbjct: 23 RNVALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN- 79
Query: 57 MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
M H DL D L + K + + V S D + GT+ LL+ +
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 139
Query: 117 AAHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G N V F ++T+ YG + +P E P +PYG +KL+ I + + +
Sbjct: 140 KTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 199
Query: 174 WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233
+ + + FN H S + + + V ++ +G+ ++ D + +D
Sbjct: 200 FAVNGI-LFN----HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGHA 252
Query: 234 RDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KA 283
+DY+ + D + + A ++ + E L GK T V E E K
Sbjct: 253 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGK-TIVWEGKNENEVGRCKE 311
Query: 284 SGK-KIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
+GK + + RP + + + KA+++LNWK + DE+ R+
Sbjct: 312 TGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVRE 357
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 78/346 (22%), Positives = 144/346 (41%)
Query: 3 KNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNN 56
+N+ +I G+ G GS+ LL GY+ + + +S +++ L A +GN
Sbjct: 23 RNVALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN- 79
Query: 57 MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
M H DL D L + K + + V S D + GT+ LL+ +
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 139
Query: 117 AAHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G N V F ++T+ YG + +P E P +PYG +KL+ I + + +
Sbjct: 140 KTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 199
Query: 174 WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233
+ + + FN H S + + + V ++ +G+ ++ D + +D
Sbjct: 200 FAVNGI-LFN----HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGHA 252
Query: 234 RDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KA 283
+DY+ + D + + A ++ + E + GK T V E E K
Sbjct: 253 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGK-TIVWEGKNENEVGRCKE 311
Query: 284 SGK-KIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
+GK + + RP + + + KA+++LNWK + DE+ R+
Sbjct: 312 TGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVRE 357
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 79/346 (22%), Positives = 144/346 (41%)
Query: 3 KNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNN 56
+N+ +I G+ G GS+ LL GY+ + + +S +++ L A +GN
Sbjct: 23 RNVALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN- 79
Query: 57 MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
M H DL D L + K + + V S D + GT+ LL+ +
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 139
Query: 117 AAHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G N V F ++T+ YG + +P E P +PYG +KL+ I + + +
Sbjct: 140 KTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 199
Query: 174 WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233
+ + + FN H S + + + V ++ +G+ ++ D + +D
Sbjct: 200 FAVNGI-LFN----HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGHA 252
Query: 234 RDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KA 283
+DY+ + D + + A ++ + E L GK T V E E K
Sbjct: 253 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGK-TIVWEGKNENEVGRCKE 311
Query: 284 SGK-KIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
+GK + + RP + + + KA+++LNWK + DE+ R+
Sbjct: 312 TGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVPFDELVRE 357
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 78/347 (22%), Positives = 142/347 (40%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGN 55
+ K L+ G G GS+ LL GY+ + + +S +++ L A +GN
Sbjct: 22 LRKVALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN 79
Query: 56 NMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEV 115
M H DL D L + K + + V S D + GT+ LL+
Sbjct: 80 -MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDA 138
Query: 116 MAAHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDS 172
+ G N V F ++T+ YG + +P E P +PYG +KL+ I + + +
Sbjct: 139 IKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN 198
Query: 173 EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTV 232
+ + + FN H S + + + V ++ +G+ ++ D + +D
Sbjct: 199 LFAVNGI-LFN----HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGH 251
Query: 233 VRDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----K 282
+DY+ + D + + A ++ + E + GK T V E E K
Sbjct: 252 AKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGK-TIVWEGKNENEVGRCK 310
Query: 283 ASGK-KIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
+GK + + RP + + + KA+++LNWK + DE+ R+
Sbjct: 311 ETGKVHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVRE 357
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 78/347 (22%), Positives = 142/347 (40%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGN 55
+ K L+ G G GS+ LL GY+ + + +S +++ L A +GN
Sbjct: 22 LRKVALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN 79
Query: 56 NMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEV 115
M H DL D L + K + + V S D + GT+ LL+
Sbjct: 80 -MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDA 138
Query: 116 MAAHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDS 172
+ G N V F ++T+ YG + +P E P +PYG +KL+ I + + +
Sbjct: 139 IKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN 198
Query: 173 EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTV 232
+ + + FN H S + + + V ++ +G+ ++ D + +D
Sbjct: 199 LFAVNGI-LFN----HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGH 251
Query: 233 VRDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----K 282
+DY+ + D + + A ++ + E + GK T V E E K
Sbjct: 252 AKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGK-TIVWEGKNENEVGRCK 310
Query: 283 ASGK-KIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
+GK + + RP + + + KA+++LNWK + DE+ R+
Sbjct: 311 ETGKIHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVRE 357
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 78/345 (22%), Positives = 141/345 (40%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNNM 57
K L+ G G GS+ LL GY+ + + +S +++ L A +GN M
Sbjct: 24 KVALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN-M 80
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
H DL D L + K + + V S D + GT+ LL+ +
Sbjct: 81 KLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIK 140
Query: 118 AHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEW 174
G N V F ++T+ YG + +P E P +PYG +KL+ I + + + +
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLF 200
Query: 175 KIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVR 234
+ + FN H S + + + V ++ +G+ ++ D + +D +
Sbjct: 201 AVNGI-LFN----HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGHAK 253
Query: 235 DYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KAS 284
DY+ + D + + A ++ + E + GK T V E E K +
Sbjct: 254 DYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGK-TIVWEGKNENEVGRCKET 312
Query: 285 GK-KIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
GK + + RP + + + KA+++LNWK + DE+ R+
Sbjct: 313 GKIHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVRE 357
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 82/350 (23%), Positives = 138/350 (39%)
Query: 1 MAKNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL---AGYQGNN 56
M K + +I G+ G GS+ LL GY+ + +S +V L + N
Sbjct: 1 MNKKVALITGITGQDGSYLAEFLLEKGYEVHGIKR--RSSLFNTQRVDHLYKDPHEEDVN 58
Query: 57 MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
H DL D + L + A + D V + V S Q P D + GT+ LLE +
Sbjct: 59 FKLHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAI 118
Query: 117 AAHGC-KNLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G K F ++T+ YG + +P E P +PY +K++ I + S
Sbjct: 119 RFLGLTKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
Query: 174 WKI--ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG--TDYSTKD 229
+ IL + +P + RG+ N + +G AL +G DY
Sbjct: 179 YACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQ 238
Query: 230 GTVVR-DYIHVVDLADGHIAALRKLDDP---KVGCEVYNLGTGKGTSVLEMVAAFEKASG 285
+++ D +A G ++R+ D ++G E+ +G G ++ A + G
Sbjct: 239 WMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKG-----VDEKAVVKSVIG 293
Query: 286 KKIPLVKSGR----------RPGDAEIVYASTEKAERELNWKAKYGIDEM 325
K P +K G RP + E + A++EL W + + +M
Sbjct: 294 TKAPAIKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITLQQM 343
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 82/350 (23%), Positives = 138/350 (39%)
Query: 1 MAKNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL---AGYQGNN 56
M K + +I G+ G GS+ LL GY+ + +S +V L + N
Sbjct: 1 MNKKVALITGITGQDGSYLAEFLLEKGYEVHGIKR--RSSLFNTQRVDHLYKDPHEEDVN 58
Query: 57 MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
H DL D + L + A + D V + V S Q P D + GT+ LLE +
Sbjct: 59 FKLHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAI 118
Query: 117 AAHGC-KNLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G K F ++T+ YG + +P E P +PY +K++ I + S
Sbjct: 119 RFLGLTKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
Query: 174 WKI--ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG--TDYSTKD 229
+ IL + +P + RG+ N + +G AL +G DY
Sbjct: 179 YACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQ 238
Query: 230 GTVVR-DYIHVVDLADGHIAALRKLDDP---KVGCEVYNLGTGKGTSVLEMVAAFEKASG 285
+++ D +A G ++R+ D ++G E+ +G G ++ A + G
Sbjct: 239 WMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKG-----VDEKAVVKSVIG 293
Query: 286 KKIPLVKSGR----------RPGDAEIVYASTEKAERELNWKAKYGIDEM 325
K P +K G RP + E + A++EL W + + +M
Sbjct: 294 TKAPAIKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITLQQM 343
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 78/346 (22%), Positives = 143/346 (41%)
Query: 3 KNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNN 56
K + +I G+ G GS+ LL GY+ + + +S +++ L A +GN
Sbjct: 9 KKVALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNSQAHIEGN- 65
Query: 57 MTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
M H DL D L + K + + + V S D + GT+ LL+ +
Sbjct: 66 MKLHYGDLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAI 125
Query: 117 AAHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G N V F ++T+ +G + +P E P +PYG +KL+ I + + +
Sbjct: 126 KTCGLINSVKFYQASTSELFGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 185
Query: 174 WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233
+ + + FN H S + + + V ++ +G+ + ++ D + +D
Sbjct: 186 FAVNGI-LFN----HESPR-RGANFVTRKISRSVAKIHLGQMDSFSLGNLD-AKRDWGHA 238
Query: 234 RDYIHVV------DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KA 283
RDY+ + D + + A ++ + E GK T V E E K
Sbjct: 239 RDYVEAMWLMLQTDEPEDFVIATGEVHSVREFVEKSFKHIGK-TIVWEGKNENEVGRCKE 297
Query: 284 SGK-KIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
+GK + + RP + + + KA ++LNWK + DE+ R+
Sbjct: 298 TGKIHVTVNHKYYRPTEVDFLQGDCTKARQKLNWKPRVTFDELVRE 343
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 57/217 (26%), Positives = 91/217 (41%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
++V GG G++GSH V +L+ G +VVDN K + + N + D+
Sbjct: 121 VVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGR-----KENVMHHFSNPNFEMIRHDV 175
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
+ LEV D + H A + P+ N+ GT+ +L + G + L
Sbjct: 176 VEPILLEV-------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 228
Query: 125 VFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
+ S+S YG P P E + P+ + Y K E + D HR + ++ +
Sbjct: 229 LTSTSEV-YGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-ANVEVRIA 286
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216
R FN G P +D R + N FV Q A+ + P
Sbjct: 287 RIFNTYG--PRMCIDDGRVVSN----FVAQ-ALRKEP 316
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 62/248 (25%), Positives = 100/248 (40%)
Query: 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVV 139
D + H A + P+ N+ GT+ +L + G + L+ S+S YG P
Sbjct: 184 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV-YGDPLQH 242
Query: 140 PCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGE 194
P E + P+ + Y K E + D HR + ++ + R FN G P +
Sbjct: 243 PQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-ANVEVRIARIFNTYG--PRMCID 299
Query: 195 DPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLD 254
D R + N FV Q A+ + P LTV+G DG R + V DL +G +R ++
Sbjct: 300 DGRVVSN----FVAQ-ALRKEP-LTVYG------DGKQTRSFQFVSDLVEG---LMRLME 344
Query: 255 DPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAEREL 314
VG +NLG ++LE+ ++ + D KA+ L
Sbjct: 345 GEHVG--PFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELL 402
Query: 315 NWKAKYGI 322
W+ K +
Sbjct: 403 GWEPKVSL 410
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 54/214 (25%), Positives = 90/214 (42%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
ILV GG G+IGSH +LL G+ + +DN S+ + ++ M FH+ ++
Sbjct: 3 ILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRL----------MDFHRFEV 52
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
+E + + D + + A + P+ ++ GTI +L +A +
Sbjct: 53 IRHDIIEPILL--EVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLG-LAKRVRARI 109
Query: 125 VFSSSATAYGWPKVVPCTEEF-----PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
+ +S++ YG P + P E + P+ + Y K E + D HR + I +
Sbjct: 110 LQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGV-DIRIA 168
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVG 213
R FN G P D R + N FV Q G
Sbjct: 169 RIFNTYG--PRMAEHDGRVVSN----FVVQALRG 196
>TAIR|locus:2195733 [details] [associations]
symbol:BAN "BANYULS" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0033729 "anthocyanidin reductase activity" evidence=IDA]
[GO:0009964 "negative regulation of flavonoid biosynthetic process"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00154
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AF092912 EMBL:AC005882 EMBL:DQ446384 EMBL:AK175960
IPI:IPI00523362 PIR:H96642 RefSeq:NP_176365.1 UniGene:At.11057
ProteinModelPortal:Q9SEV0 SMR:Q9SEV0 STRING:Q9SEV0 PaxDb:Q9SEV0
PRIDE:Q9SEV0 EnsemblPlants:AT1G61720.1 GeneID:842469
KEGG:ath:AT1G61720 TAIR:At1g61720 HOGENOM:HOG000167998
InParanoid:Q9SEV0 KO:K08695 OMA:ICCAYNT PhylomeDB:Q9SEV0
ProtClustDB:PLN00198 SABIO-RK:Q9SEV0 Genevestigator:Q9SEV0
GO:GO:0033729 GO:GO:0009813 GO:GO:0009964 Uniprot:Q9SEV0
Length = 340
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 85/344 (24%), Positives = 146/344 (42%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKT-VVVDNLDNASEIA-VAKVKELAGYQGNNMTF 59
+K VIGG G + S + LL GYK V + +N +IA + K++EL ++
Sbjct: 10 SKKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELG-----DLKI 64
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAG-LKAVGESVQKPLPYFDNNLTGTITLLE-VMA 117
K DL D+ + E F+G ++ + H A + E +K + + G I +L+ +
Sbjct: 65 FKADLTDEDSFESSFSGCEY--IFHVATPINFKSEDPEKDM--IKPAIQGVINVLKSCLK 120
Query: 118 AHGCKNLVFSSSATAYG---------------WPKVVPCTEEFPLQAMNPYGRSKLFIEE 162
+ K ++++SSA A W V TEE P P SK+ E+
Sbjct: 121 SKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPI--SKVLAEK 178
Query: 163 ICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222
+ + + KI L+ + A S + P + + M F+T G+ +T
Sbjct: 179 TAWEFAKEN---KINLVTVIPALIAGNSLLSDPPSSLSLS-MSFIT----GKEMHVTGL- 229
Query: 223 TDYSTKDGTVVRDYIHVVDLADGHI-AALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE 281
+ G++ ++HV DLA H+ A ++ + C YN TSV E +A F
Sbjct: 230 KEMQKLSGSI--SFVHVDDLARAHLFLAEKETASGRYICCAYN------TSVPE-IADFL 280
Query: 282 KASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEM 325
K ++ + S++K E ++ +YGI+EM
Sbjct: 281 IQRYPKYNVLSEFEEGLSIPKLTLSSQKLINE-GFRFEYGINEM 323
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 69/291 (23%), Positives = 115/291 (39%)
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
H DL D + L + + D V + V S + P D + GT+ LLE +
Sbjct: 63 HYGDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAIRFL 122
Query: 120 GC-KNLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKI 176
G K F ++T+ YG + +P +E P +PY +K++ I + S +
Sbjct: 123 GLEKKTKFYQASTSELYGEVQEIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYGMYAC 182
Query: 177 --ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG--TDYSTKDGTV 232
IL + +P + R I N + + +G AL +G DY +
Sbjct: 183 NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDALRDWGHAKDYVRMQWMM 242
Query: 233 VRDYIHVVD--LADGHIAALRK---LDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKK 287
++ H D +A G ++R+ L + G E+ G G L+ VA K G
Sbjct: 243 LQQE-HPDDFVIATGKQISVREFVTLSALEAGIELTFSGEG-----LDEVARVTKIIGDN 296
Query: 288 IPLVKSGR----------RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
P + G RP + E + KA+ +L W + ++EMC +
Sbjct: 297 APALSVGDIMVKVDPRYFRPAEVETLLGDPSKAKEKLGWVPQITVEEMCSE 347
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 75/310 (24%), Positives = 124/310 (40%)
Query: 3 KNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGN---NMT 58
K + +I G+ G GS+ LL GY+ + +S + ++ + YQ N N
Sbjct: 4 KKVALITGITGQDGSYLAELLLEKGYEVHGIKR--RSSSLNTERIDHI--YQDNHEKNQK 59
Query: 59 F--HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVM 116
F H DL D + L + + D V + V S + P D + GT+ LLE +
Sbjct: 60 FFLHYGDLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAI 119
Query: 117 AAHGC-KNLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSE 173
G K F ++T+ YG + +P +E P +PY +K++ I + S
Sbjct: 120 RFLGLEKKTKFYQASTSELYGEVQEIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYGM 179
Query: 174 WKI--ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG--TDYSTKD 229
+ IL + +P + R I N + + +G AL +G DY
Sbjct: 180 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDALRDWGHAKDYVRMQ 239
Query: 230 GTVVRDYIHVVD--LADGHIAALRK---LDDPKVGCEVYNLGTGKGTSVLEMVAAFEKAS 284
+++ H D +A G ++R+ L + G E+ G G L+ VA K
Sbjct: 240 WMMLQQE-HPDDFVIATGKQISVREFVTLSALEAGIELTFSGEG-----LDEVARVTKII 293
Query: 285 GKKIPLVKSG 294
G P + G
Sbjct: 294 GDNAPALSVG 303
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 79/350 (22%), Positives = 144/350 (41%)
Query: 3 KNILVIGGV-GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQG------N 55
+ + VI G+ G GS+ LL GY+ + L +S +++ L YQ
Sbjct: 21 RKVAVITGITGQDGSYLAEFLLEKGYEVHGI--LRRSSSFNTGRIEHL--YQNPQTHTEG 76
Query: 56 NMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNL--TGTITLL 113
NM H DL D L + K + + V S + L + N+ GT+ LL
Sbjct: 77 NMKLHYGDLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFE--LAEYTANVDGVGTLRLL 134
Query: 114 EVMAAHGCKNLV-FSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRS 170
+ + G N V F ++T+ YG + +P E P +PYG +KL+ I + +
Sbjct: 135 DAIKTCGLTNSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREA 194
Query: 171 DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230
+ + + + FN H S + + + V ++ +G+ + ++ D S +D
Sbjct: 195 YNLFAVNGI-LFN----HESPR-RGANFVTRKISRSVAKIHLGQLESFSLGNLD-SKRDW 247
Query: 231 TVVRDYIHVV----------DL--ADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVA 278
+DY+ + DL A G + ++R+ + K V +G E V
Sbjct: 248 GHAKDYVEAMWLMLQQEEPEDLVIATGEVHSVREFVE-KSFKHVGKTIVWEGKDENE-VG 305
Query: 279 AFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
++ + + RP + E + + KA +L WKAK +E+ ++
Sbjct: 306 RCQETGVIHVKVDSKYYRPTEVEYLQGDSTKALTKLGWKAKITFEELVKE 355
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 75/333 (22%), Positives = 136/333 (40%)
Query: 15 GSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNNMTFHKLDLRDKAA 69
GS+ LL GY+ + + +S +++ L A +GN M H DL D
Sbjct: 6 GSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYGDLTDSTC 62
Query: 70 LEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLV-FSS 128
L + K + + V S D + GT+ LL+ + G N V F
Sbjct: 63 LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQ 122
Query: 129 SATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVG 186
++T+ YG + +P E P +PYG +KL+ I + + + + + + FN
Sbjct: 123 ASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI-LFN--- 178
Query: 187 AHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV------ 240
H S + + + V ++ +G+ ++ D + +D +DY+ +
Sbjct: 179 -HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGHAKDYVEAMWLMLQN 235
Query: 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KASGK-KIPLVKSGR 295
D + + A ++ + E L GK T V E E K +GK + +
Sbjct: 236 DEPEDFVIATGEVHSVREFVEKSFLHIGK-TIVWEGKNENEVGRCKETGKVHVTVDLKYY 294
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
RP + + + KA+++LNWK + DE+ R+
Sbjct: 295 RPTEVDFLQGDCTKAKQKLNWKPRVAFDELVRE 327
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 63/294 (21%), Positives = 114/294 (38%)
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLP--YFDNNLTGTITLLEV 115
T +L+L D A+ FA + D V + A K G P + N+ ++
Sbjct: 35 TRDELNLLDSRAVHDFFASERIDQV-YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHA 93
Query: 116 MAAHGCKNLVFSSSATAYGWPKVV--PCTEEFPLQAM-----NPYGRSKLFIEEICRDVH 168
+ L+F S+ Y PK+ P E LQ PY +K+ ++C +
Sbjct: 94 AHQNDVNKLLFLGSSCIY--PKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYN 151
Query: 169 RS-DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227
R +++ ++ N G H + + IP L F + P + V+G+
Sbjct: 152 RQYGRDYRSVMPT--NLYGPHDNFHPSNSHVIPALLRRF-HEATAQNAPDVVVWGS---- 204
Query: 228 KDGTVVRDYIHVVDLADG--HIAALRK---LDDPKVGCEVYNLGTGKGTSVLEMVAAFEK 282
GT +R+++HV D+A H+ L L++ + N+GTG ++ E+ K
Sbjct: 205 --GTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAK 262
Query: 283 ASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336
G K +V +P + +L W + ++ + W +N
Sbjct: 263 VVGYKGRVVFDASKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLEN 315
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 75/333 (22%), Positives = 136/333 (40%)
Query: 15 GSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNNMTFHKLDLRDKAA 69
GS+ LL GY+ + + +S +++ L A +GN M H DL D
Sbjct: 7 GSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYGDLTDSTC 63
Query: 70 LEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLV-FSS 128
L + K + + V S D + GT+ LL+ + G N V F
Sbjct: 64 LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQ 123
Query: 129 SATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVG 186
++T+ YG + +P E P +PYG +KL+ I + + + + + + FN
Sbjct: 124 ASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI-LFN--- 179
Query: 187 AHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV------ 240
H S + + + V ++ +G+ ++ D + +D +DY+ +
Sbjct: 180 -HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGHAKDYVEAMWLMLQN 236
Query: 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KASGK-KIPLVKSGR 295
D + + A ++ + E L GK T V E E K +GK + +
Sbjct: 237 DEPEDFVIATGEVHSVREFVEKSFLHIGK-TIVWEGKNENEVGRCKETGKVHVTVDLRYY 295
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
RP + + + KA+++LNWK + DE+ R+
Sbjct: 296 RPTEVDFLQGDCTKAKQKLNWKPRVAFDELVRE 328
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 108 (43.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA--A 118
++D+ D AAL V + + V+H A + V + + N+ GT LLE +A +
Sbjct: 51 RVDICDLAALRRVVEEVEPEVVVHLAAISFVAHGEADAI--YRANVVGTRNLLEALAGLS 108
Query: 119 HGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRD-VHRSDSEWKII 177
+ ++ +SSA YG V E L N Y SKL +E + R +HR I+
Sbjct: 109 RTPRAVLLASSANVYGNAPVELIDESVSLAPANDYAVSKLAMEYMARLWMHRLP----IV 164
Query: 178 LLRYFNPVG 186
+ R FN G
Sbjct: 165 IARPFNYTG 173
Score = 55 (24.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 241 DLADGHIAAL---RKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKI 288
D +D + AL R L+ G +V N+G+G+ S+ E++A SG +I
Sbjct: 206 DFSDVRVVALAYVRLLEVVPAG-QVVNVGSGQVVSLREVLAMMSGISGHEI 255
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 123 (48.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 65/239 (27%), Positives = 98/239 (41%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTV-VVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
I+V GG G+IGS+ V L G + VVDNL + ++ +A Y +D
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADY---------MD 52
Query: 64 LRDKAALEVVFAGTKF---DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
D L + AG +F +A+ H + E K + DNN + LL
Sbjct: 53 KED--FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLERE 108
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLR 180
L SS+AT G + E+ + +N YG SK +E R + ++ +I+ R
Sbjct: 109 IPFLYASSAATYGGRTSDFIESREYE-KPLNVYGYSKFLFDEYVRQI-LPEANSQIVGFR 166
Query: 181 YFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239
YFN G KG + + TQ+ G P L G++ +D V D V
Sbjct: 167 YFNVYGPREGHKGS----MASVAFHLNTQLNNGESPKLFE-GSENFKRDFVYVGDVADV 220
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 123 (48.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 75/333 (22%), Positives = 135/333 (40%)
Query: 15 GSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL-----AGYQGNNMTFHKLDLRDKAA 69
GS+ LL GY+ + + +S +++ L A +GN M H DL D
Sbjct: 14 GSYLAEFLLEKGYEVHGI--VRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYGDLTDSTC 70
Query: 70 LEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLV-FSS 128
L + K + + V S D + GT+ LL+ + G V F
Sbjct: 71 LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLIGSVRFYQ 130
Query: 129 SATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVG 186
++T+ YG + P E P +PYG +KL+ I + + + + + + FN
Sbjct: 131 ASTSELYGKVQETPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI-LFN--- 186
Query: 187 AHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV------ 240
H S + + + V ++ +G+ ++ D + +D +DY+ +
Sbjct: 187 -HESPR-RGANFVTRKISRSVAKIYLGQLECFSLGNLD-AKRDWGHAKDYVEAMWLMLQS 243
Query: 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE----KASGK-KIPLVKSGR 295
D + + A ++ + E L GK T V E E K SG+ + +
Sbjct: 244 DEPEDFVIATGEVHSVREFVEKSFLHIGK-TIVWEGKDEHEVGRCKESGRVHVRVDLKYY 302
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
RP + + + KA+++LNWK + G DE+ R+
Sbjct: 303 RPTEVDFLQGDCTKAKQKLNWKPRVGFDELVRE 335
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 110 (43.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 42/167 (25%), Positives = 76/167 (45%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAG----YQGN-NM 57
K L+ G G GS+ LL GYK + + +S A+++ L G + G+ +
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGI--IRRSSSFNTARIEHLYGNPVTHNGSASF 91
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
+ H D+ D + L + + + + H A V S P + + GT+ LL+ A
Sbjct: 92 SLHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD--A 149
Query: 118 AHGCK---NLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLF 159
H C+ + F ++T+ YG + +P +E P +PY +K++
Sbjct: 150 IHACRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMY 196
Score = 54 (24.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
RP + E + + KA + L W+ K + E+ ++
Sbjct: 335 RPTEVETLLGNPAKARKTLGWEPKITVPELVKE 367
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 110 (43.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 42/167 (25%), Positives = 76/167 (45%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAG----YQGN-NM 57
K L+ G G GS+ LL GYK + + +S A+++ L G + G+ +
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGI--IRRSSSFNTARIEHLYGNPVTHNGSASF 91
Query: 58 TFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA 117
+ H D+ D + L + + + + H A V S P + + GT+ LL+ A
Sbjct: 92 SLHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLD--A 149
Query: 118 AHGCK---NLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLF 159
H C+ + F ++T+ YG + +P +E P +PY +K++
Sbjct: 150 IHACRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMY 196
Score = 54 (24.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 296 RPGDAEIVYASTEKAERELNWKAKYGIDEMCRD 328
RP + E + + KA + L W+ K + E+ ++
Sbjct: 335 RPTEVETLLGNPAKARKTLGWEPKITVPELVKE 367
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 97 (39.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 39/164 (23%), Positives = 71/164 (43%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKEL----AGYQGNNMT 58
K L+ G G GS+ LL Y+ + + AS +++ L ++G M
Sbjct: 47 KVALITGITGQDGSYLAEFLLKKDYEVHGI--IRRASTFNTTRIEHLYADPKAHKGGRMK 104
Query: 59 FHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA 118
H D+ D ++L + K + + A V S + + GT+ +L+ +
Sbjct: 105 LHYGDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEVDAVGTLRILDAIRT 164
Query: 119 HGC-KNLVFSSSATAYGWPKVV--PCTEEFPLQAMNPYGRSKLF 159
G KN+ F ++T+ + KVV P E+ P +PY +K++
Sbjct: 165 CGMEKNVRFYQASTSELYGKVVETPQNEQTPFYPRSPYACAKMY 208
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 267 TGKGTSVLEMVAAFEKASG-KKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEM 325
T KG V E+ E +G ++ + RP + +++ KA RELNW K E+
Sbjct: 320 TWKGKGVDEV--GVENGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVTFVEL 377
Query: 326 CRD 328
D
Sbjct: 378 VSD 380
Score = 59 (25.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 290 LVKSGRRPGDAEIVYASTEKAERELNWKAKYGIDEM 325
++ +G E V A+ + +RE+ WK K G+DE+
Sbjct: 295 VIATGETHSVREFVEAAFKHIDREITWKGK-GVDEV 329
>FB|FBgn0036620 [details] [associations]
symbol:CG4842 species:7227 "Drosophila melanogaster"
[GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR002198 InterPro:IPR002424
InterPro:IPR002426 InterPro:IPR020904 Pfam:PF00106 PRINTS:PR00080
PRINTS:PR01167 PRINTS:PR01169 PROSITE:PS00061 InterPro:IPR016040
EMBL:AE014296 GO:GO:0000166 Gene3D:3.40.50.720 eggNOG:COG1028
GO:GO:0004022 HSSP:P10807 GeneTree:ENSGT00700000104319
OrthoDB:EOG4M640F EMBL:AY118787 RefSeq:NP_648885.1 UniGene:Dm.7978
SMR:Q9VV47 STRING:Q9VV47 EnsemblMetazoa:FBtr0075384 GeneID:39817
KEGG:dme:Dmel_CG4842 UCSC:CG4842-RA FlyBase:FBgn0036620
InParanoid:Q9VV47 OMA:TRAMANP GenomeRNAi:39817 NextBio:815536
Uniprot:Q9VV47
Length = 259
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 44/140 (31%), Positives = 74/140 (52%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
KN++ +GG G IG V +LL K + + +L NA+E +AK K + + ++ +HKL
Sbjct: 6 KNVVYLGGFGGIGQKCVQELLQRPIKALAIFDL-NANEQLLAKWK--SQHPDTDVFYHKL 62
Query: 63 DLRDKAALEVVFAGTK-----FDAVIHFAGL---KAVGESVQKPLPYFDNNLTGTITLLE 114
D+ K+ ++ + T FD V++ +GL + V ++Q L N+ T+T LE
Sbjct: 63 DITQKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVELTIQINLLGVINS---TLTALE 119
Query: 115 VM-AAHGCKN-LVFSSSATA 132
M A G K L+ + S+ A
Sbjct: 120 YMDKAKGGKGGLIVNISSVA 139
>TIGR_CMR|SO_4174 [details] [associations]
symbol:SO_4174 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR005913 Pfam:PF04321
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000227713 OMA:MTKYQML
GO:GO:0008831 GO:GO:0045226 RefSeq:NP_719703.1
ProteinModelPortal:Q8E9T9 GeneID:1171780 KEGG:son:SO_4174
PATRIC:23527976 ProtClustDB:CLSK907528 Uniprot:Q8E9T9
Length = 306
Score = 106 (42.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/129 (28%), Positives = 54/129 (41%)
Query: 51 GYQGNNMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTI 110
G+ HKLDL A+E A + + ++H A + S Q P NL+ +
Sbjct: 32 GFSCAEANIHKLDLTQAIAVEAFIARERPEVIVHCAAERRPDVSEQSPEQALALNLSASQ 91
Query: 111 TLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRS 170
TL + HG L S+ G P E+ +N YG SKL E C V +
Sbjct: 92 TLAKAAKQHGAWLLYISTDYVFDG--TTPPYAEDAAPNPVNFYGESKLQ-GETC--VLNT 146
Query: 171 DSEWKIILL 179
DS + ++ L
Sbjct: 147 DSRFAVLRL 155
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 4 NILVIGGVGYIGSHTVLQLLLGGYKTV 30
NI+V G G +G V QL G++ +
Sbjct: 3 NIMVTGATGLLGRAVVKQLTAAGHRVI 29
>UNIPROTKB|Q888H1 [details] [associations]
symbol:udh "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE016853 GenomeReviews:AE016853_GR HOGENOM:HOG000129432
OMA:GEDMASF ProtClustDB:CLSK908641 EMBL:EU377538 RefSeq:NP_790889.1
ProteinModelPortal:Q888H1 GeneID:1182687 KEGG:pst:PSPTO_1053
PATRIC:19993323 BioCyc:PSYR223283:GJIX-1075-MONOMER GO:GO:0050388
Uniprot:Q888H1
Length = 275
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 25 GGYKTVVVDNLDNASEIA-VAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAVI 83
GG V+ + L S I ++ + E+A G++ DL DK A+ + G DA++
Sbjct: 21 GGLGKVLRETLRPYSHILRLSDIAEMAPAVGDHEEVQVCDLADKDAVHRLVEGV--DAIL 78
Query: 84 HFAGLKAVGESVQKPLP-YFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCT 142
HF G+ SV++P N+ G + E HG K ++F+SS G+ K
Sbjct: 79 HFGGV-----SVERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIGFYKQNETI 133
Query: 143 EEF-PLQAMNPYGRSKLFIEEI 163
+ P + + YG SK + E++
Sbjct: 134 DAHSPRRPDSYYGLSKSYGEDM 155
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 45/193 (23%), Positives = 81/193 (41%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
+++L+IGG G++G H + Q V + D K+ + + + + F K
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRH-CPNVAITVFDVRP--LPEKLSKYFTFDPSKIQFFKG 62
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAG-LKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
DL + +K D ++H A + + + + + + N+ GT LL V
Sbjct: 63 DLTSDKDVSDAINQSKCDVIVHSASPMHGLPQEIYEKV-----NVQGTKNLLSVAQKLHV 117
Query: 122 KNLVFSSSA-TAYGWPKVVPCTEEFPLQA--MNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
K LV++SSA + V+ E +P M+ Y +K EE + +D + + +
Sbjct: 118 KALVYTSSAGVIFNGQDVINADETWPYPEVHMDGYNETKAAAEEAVMKANDND-QLRTVC 176
Query: 179 LRYFNPVGAHPSG 191
LR P G G
Sbjct: 177 LR---PAGIFGPG 186
Score = 57 (25.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 209 QVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDD 255
Q+ G R + + + Y D + D+ +V ++AD H+ A +K+ D
Sbjct: 189 QLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADAHVLAAQKILD 235
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 45/193 (23%), Positives = 81/193 (41%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
+++L+IGG G++G H + Q V + D K+ + + + + F K
Sbjct: 6 QSVLIIGGSGFLGLHLIEQFYRH-CPNVAITVFDVRP--LPEKLSKYFTFDPSKIQFFKG 62
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAG-LKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC 121
DL + +K D ++H A + + + + + + N+ GT LL V
Sbjct: 63 DLTSDKDVSDAINQSKCDVIVHSASPMHGLPQEIYEKV-----NVQGTKNLLSVAQKLHV 117
Query: 122 KNLVFSSSA-TAYGWPKVVPCTEEFPLQA--MNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
K LV++SSA + V+ E +P M+ Y +K EE + +D + + +
Sbjct: 118 KALVYTSSAGVIFNGQDVINADETWPYPEVHMDGYNETKAAAEEAVMKANDND-QLRTVC 176
Query: 179 LRYFNPVGAHPSG 191
LR P G G
Sbjct: 177 LR---PAGIFGPG 186
Score = 57 (25.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 209 QVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDD 255
Q+ G R + + + Y D + D+ +V ++AD H+ A +K+ D
Sbjct: 189 QLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADAHVLAAQKILD 235
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 52/212 (24%), Positives = 95/212 (44%)
Query: 4 NILVIGGVGYIGSHTVLQLL-LGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
++L+IGG G++G H + Q + + + ++ + E K+ + + +++ FHK
Sbjct: 6 SVLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPE----KLSKQFTFNVDDIKFHKG 61
Query: 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK 122
DL +E +K + V+H A G Q P Y N+ GT ++++ G
Sbjct: 62 DLTSPDDMENAINESKANVVVHCAS-PMHG---QNPDIYDIVNVKGTRNVIDMCKKCGVN 117
Query: 123 NLVFSSSA-TAYGWPKVVPCTEEFPLQA--MNPYGRSKLFIEEICRDVHRSDSEWKIILL 179
LV++SSA + V E +P+ M+ Y +K E++ + S++ + L
Sbjct: 118 ILVYTSSAGVIFNGQDVHNADETWPIPEVPMDAYNETKAIAEDMVLKANDPSSDFYTVAL 177
Query: 180 RYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA 211
R P G G G+ L+P + QVA
Sbjct: 178 R---PAGIF--GPGD------RQLVPGLRQVA 198
>UNIPROTKB|Q5HTB4 [details] [associations]
symbol:flmA "Polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKT--VVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
KNIL+ GG G G T ++LL YK +++ + D + +A V + + M +
Sbjct: 5 KNILITGGTGSFGK-TYTKVLLENYKPNKIIIYSRDELKQFEMASV-----FNASCMRYF 58
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
D+RDK L F VIH A +K V + P+ N+ G +++ +G
Sbjct: 59 IGDVRDKERLSTAMRDVDF--VIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG 116
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHR--SDSEWKIIL 178
K + S+ A C P+ N YG +KL +++ + + + + +
Sbjct: 117 VKKCIALSTDKA--------CN---PV---NLYGATKLASDKLFVAANNIAGNKQTRFGV 162
Query: 179 LRYFNPVGAHPS 190
RY N VG+ S
Sbjct: 163 TRYGNVVGSRGS 174
>TIGR_CMR|CJE_1485 [details] [associations]
symbol:CJE_1485 "polysaccharide biosynthesis protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1086
HOGENOM:HOG000257079 OMA:ICIHAAA InterPro:IPR020025
TIGRFAMs:TIGR03589 RefSeq:YP_179471.1 ProteinModelPortal:Q5HTB4
SMR:Q5HTB4 STRING:Q5HTB4 GeneID:3232117 KEGG:cjr:CJE1485
PATRIC:20044764 KO:K15894 ProtClustDB:CLSK879183
BioCyc:CJEJ195099:GJC0-1514-MONOMER Uniprot:Q5HTB4
Length = 334
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKT--VVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
KNIL+ GG G G T ++LL YK +++ + D + +A V + + M +
Sbjct: 5 KNILITGGTGSFGK-TYTKVLLENYKPNKIIIYSRDELKQFEMASV-----FNASCMRYF 58
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG 120
D+RDK L F VIH A +K V + P+ N+ G +++ +G
Sbjct: 59 IGDVRDKERLSTAMRDVDF--VIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENG 116
Query: 121 CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHR--SDSEWKIIL 178
K + S+ A C P+ N YG +KL +++ + + + + +
Sbjct: 117 VKKCIALSTDKA--------CN---PV---NLYGATKLASDKLFVAANNIAGNKQTRFGV 162
Query: 179 LRYFNPVGAHPS 190
RY N VG+ S
Sbjct: 163 TRYGNVVGSRGS 174
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 82 (33.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 57/221 (25%), Positives = 91/221 (41%)
Query: 51 GYQGNNMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTI 110
G+ + F DL ++ L G V H A + S K L ++ N TGT
Sbjct: 61 GFDNPRVQFFIGDLCNQQDLYPALKGVS--TVFHCASPPS--NSNNKEL-FYRVNSTGTK 115
Query: 111 TLLEVMAAHGCKNLVFSSSATA-YGWPKVVPCTEEFPLQAMNP---YGRSKLFIEEICRD 166
T++E G + L+ +SSA+ + + TE+ P AM P Y +K+ E D
Sbjct: 116 TVIETCKEAGVQKLILTSSASVVFEGVDIKNGTEDLPY-AMKPIDYYTETKILQERAVLD 174
Query: 167 VHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALT-VFGTDY 225
+ D + K L P G G DP+ L+P + A R+ + + G
Sbjct: 175 AN--DPK-KNFLTAAIRPHGIF--GP-RDPQ-----LVPVLIDAA--RKGKMKFMIGNGK 221
Query: 226 STKDGTVVRDYIHVVDLADGHIAALRKLD-DPKVGCEVYNL 265
+ D T V + +H GHI A L D +G + +++
Sbjct: 222 NLVDFTFVENVVH------GHILAAEHLSRDAGLGGKAFHI 256
Score = 77 (32.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVD 33
AK VIGG G++G H V QLL GY V D
Sbjct: 26 AKKCTVIGGSGFLGQHMVEQLLSRGYAVNVFD 57
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 112 (44.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 48/171 (28%), Positives = 72/171 (42%)
Query: 3 KNILVIGGVGYIGSHTVLQL--LLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
K ILV G +G IGS V++L + G + D + SE+ + G F
Sbjct: 2 KKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTS------G------PFE 49
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGL-KAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
LD+ D L + + D +IH A L A E + PL ++ N+ G + LE
Sbjct: 50 TLDVTDGQKLHDIAKRNEVDTIIHLAALLSATAE--KNPLFAWNLNMGGLVNALEAAREL 107
Query: 120 GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNP-YGRSKLFIEEICRDVHR 169
CK SS A+G T + +Q YG +K+ E +C H+
Sbjct: 108 NCKFFT-PSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQ 157
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 310 AERELNWKAKYGIDEMCRD 328
A +E +KA+Y +D+M D
Sbjct: 287 AMKEWGFKAEYDLDKMTTD 305
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 112 (44.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 48/171 (28%), Positives = 72/171 (42%)
Query: 3 KNILVIGGVGYIGSHTVLQL--LLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH 60
K ILV G +G IGS V++L + G + D + SE+ + G F
Sbjct: 2 KKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTS------G------PFE 49
Query: 61 KLDLRDKAALEVVFAGTKFDAVIHFAGL-KAVGESVQKPLPYFDNNLTGTITLLEVMAAH 119
LD+ D L + + D +IH A L A E + PL ++ N+ G + LE
Sbjct: 50 TLDVTDGQKLHDIAKRNEVDTIIHLAALLSATAE--KNPLFAWNLNMGGLVNALEAAREL 107
Query: 120 GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNP-YGRSKLFIEEICRDVHR 169
CK SS A+G T + +Q YG +K+ E +C H+
Sbjct: 108 NCKFFT-PSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQ 157
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 310 AERELNWKAKYGIDEMCRD 328
A +E +KA+Y +D+M D
Sbjct: 287 AMKEWGFKAEYDLDKMTTD 305
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 79 (32.9 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 58/232 (25%), Positives = 94/232 (40%)
Query: 35 LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGES 94
LD + V +++ + + + F DL +K AL D + F S
Sbjct: 30 LDKGYSVNVFDIQKR--FDHDRVQFFLGDLCNKEALLPALQ----DVSVAFHCASPAPSS 83
Query: 95 VQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATA-YGWPKVVPCTEEFPLQAMNP- 152
K L ++ N GT ++E G + LV +SSA+ + + TE+ P A P
Sbjct: 84 DNKEL-FYKVNFMGTKAVIEACKEAGVQKLVLTSSASVVFEGTDIKNGTEDLPY-AKKPI 141
Query: 153 --YGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQV 210
Y +K+ E+ + D+ + +R P G G DP+ L+P + Q
Sbjct: 142 DYYTETKILQEKEVLSANDPDNNFFTTAIR---PHGIF--GP-RDPQ-----LVPILIQA 190
Query: 211 AVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAA---LRKLDDPKVG 259
A + + G DG + D+ +V ++ GHI A LRK D P G
Sbjct: 191 AKSGKMKF-IIG------DGKNLVDFTYVENVVHGHILAAEHLRK-DSPVCG 234
Score = 70 (29.7 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVD 33
K +VIGG G++G H V +LL GY V D
Sbjct: 10 KKCVVIGGSGFLGQHMVEKLLDKGYSVNVFD 40
Score = 45 (20.9 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 304 YASTEKAERELNWKAKYGIDE 324
Y S E+A+R++ +K +DE
Sbjct: 309 YYSCERAKRDMGYKPVVSLDE 329
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 116 (45.9 bits), Expect = 0.00041, P = 0.00041
Identities = 78/361 (21%), Positives = 143/361 (39%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTV-VVDNLDNASEIAVAKVKELAGYQGNNMTF 59
M K + G G GS+ LL Y+ ++ + + ++ + E + +
Sbjct: 1 MRKKAFITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFL 60
Query: 60 HKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMA-A 118
H D+ D L + K V + A V S P+ + GT+ +LE + A
Sbjct: 61 HYGDITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPVYTMETIGLGTLNILEAIKNA 120
Query: 119 HGCKNLVF--SSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKI 176
K + F +SS+ YG K VP TE P +PY +K+F H ++
Sbjct: 121 DNAKEIRFYQASSSEMYGDVKSVPQTESTPFNPRSPYACAKVF-------AH-----YQT 168
Query: 177 ILLRYFNPVGAHPS-G---KGEDPR-G---IPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228
I Y G H S G E PR G + + + ++ G + + G + +
Sbjct: 169 I--NYRESYGLHASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYL-GNLEAKR 225
Query: 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVA-AFE--KASG 285
D +DY+ + L + + D P + Y + TG+ SV E++ +F +
Sbjct: 226 DWGYAKDYVEAMWL-------MLQQDTP----DDYVIATGETWSVKELLEYSFNLVNLNW 274
Query: 286 KKIPLVKSGR-RPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESPN 344
+ ++ RP + +++ +KA+ +L W+ ++ + K+ YG P+
Sbjct: 275 RDFVVIDPKYYRPAEVDLLLGEPKKAKEKLGWQPNTSFHKLIKIMLEHDFKS-YGVMLPS 333
Query: 345 S 345
S
Sbjct: 334 S 334
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 63/263 (23%), Positives = 112/263 (42%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKT--VVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD 63
+++GG G++G+H + L G K +VVD E K+ + +N+++ K
Sbjct: 5 VIVGGGGFLGAHVISALQKIGCKERIIVVDPCPQ--EFKTIKIDK------SNISYIKAS 56
Query: 64 LRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKN 123
D LE + G AV+H A + G + N+ GT L++ A G K
Sbjct: 57 FLDDKVLENILNGAS--AVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGVKR 114
Query: 124 LVFSSS-ATAYGWPKVVPCTEEFPL----QAMNPYGRSKLFIEEICRDVHRSDSEWKIIL 178
+++SS A ++ + TE+ PL + ++ Y SK E + +S ++K +
Sbjct: 115 FLYASSVAVSFIGEPLDNVTEDDPLPDPKKYLDFYSASKAEAETYV--LSQSTPDFKTVC 172
Query: 179 LRYFNPVGAH-PSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237
LR+ G P+ + I N L F+ V+ R +++ + + + D
Sbjct: 173 LRFRGIYGPEDPNVTLKVANLIKNGL--FIGMVSAHGRESVSCASSGVNCAKAFALAD-- 228
Query: 238 HVVDLADG-HIAALRKLDDPKVG 259
++ DG H A LD VG
Sbjct: 229 QMLQNPDGLHGRAYYILDGENVG 251
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00057
Identities = 66/293 (22%), Positives = 117/293 (39%)
Query: 6 LVIGGVGYIGSHTVLQLLLGGYKT---VVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL 62
L+ GG G+IGS+ L + Y +D L S + ++ N F ++
Sbjct: 13 LITGGAGFIGSN-FLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQP--NFRFLEM 69
Query: 63 DLRD--KAALEVVFAGTKFDAVIH---FAGLKAVGESVQKPLPYFDNNLTGTITLLE-VM 116
DL K + + ++ + + H FA +V S PL + NN+ T LLE V
Sbjct: 70 DLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVR 129
Query: 117 AAHGCK-------NLVFSSSATAYG-WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVH 168
G K N V S+ YG + E+ L +PY SK ++ I + +
Sbjct: 130 ILLGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKAAVDLIIQS-Y 188
Query: 169 RSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVG-RRPALTVFGTDYST 227
R + + ++R N G + P + L F+ Q + + +T+ G
Sbjct: 189 RYSYKISVTVIRANNVYGPRQYEEKLIPMTL-GKLKKFINQKSQKIMQDKITLHGDGLHK 247
Query: 228 KDGTVVRDYIHVVDLA---DGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMV 277
+ + D+I+ +DL G L+ K+ +++N+G+ L +V
Sbjct: 248 RKYLHIYDFINAIDLVWMKQGSEVYHSTLES-KMSGQIFNIGSDDEIDNLSLV 299
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 79 (32.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 55/220 (25%), Positives = 88/220 (40%)
Query: 51 GYQGNNMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTI 110
G+ + F DL + L G + V H A S K L ++ N GT
Sbjct: 72 GFDNPQVRFFLGDLCSRQDLYPALKGV--NTVFHCASPPP--SSNNKEL-FYRVNYIGTK 126
Query: 111 TLLEVMAAHGCKNLVFSSSATA-YGWPKVVPCTEEFPLQAMNP---YGRSKLFIEEICRD 166
++E G + L+ +SSA+ + + TE+ P AM P Y +K+ E
Sbjct: 127 NVIETCKEAGVQKLILTSSASVIFEGVDIKNGTEDLPY-AMKPIDYYTETKILQERAV-- 183
Query: 167 VHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226
+ +D E K L P G G DP+ L+P + + A + V G +
Sbjct: 184 LGANDPE-KNFLTTAIRPHGIF--GP-RDPQ-----LVPILIEAARNGKMKF-VIGNGKN 233
Query: 227 TKDGTVVRDYIHVVDLADGHIAALRKLD-DPKVGCEVYNL 265
D T V + +H GHI A +L D +G + +++
Sbjct: 234 LVDFTFVENVVH------GHILAAEQLSRDSTLGGKAFHI 267
Score = 78 (32.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVD 33
AK VIGG G++G H V QLL GY V D
Sbjct: 37 AKRCTVIGGSGFLGQHMVEQLLARGYAVNVFD 68
>UNIPROTKB|Q74FC2 [details] [associations]
symbol:hpnA "NAD-dependent nucleoside diphosphate-sugar
epimerase/dehydratase" species:243231 "Geobacter sulfurreducens
PCA" [GO:0006694 "steroid biosynthetic process" evidence=ISS]
[GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0045552
HOGENOM:HOG000168005 KO:K00091 RefSeq:NP_951744.1
ProteinModelPortal:Q74FC2 GeneID:2685417 KEGG:gsu:GSU0687
PATRIC:22024129 OMA:FESSKAT ProtClustDB:CLSK827993
BioCyc:GSUL243231:GH27-722-MONOMER InterPro:IPR017829
TIGRFAMs:TIGR03466 Uniprot:Q74FC2
Length = 328
Score = 103 (41.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 53/198 (26%), Positives = 85/198 (42%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+ V G G+IG+ V +LL G V+ + + LAG ++ + DL
Sbjct: 3 VFVTGATGFIGASIVRELLKDGCHVRVLARPGSDR-------RNLAGL---DVEICEGDL 52
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
RD+ ALE AG + + H A + + P + N+ GT +LE G +
Sbjct: 53 RDRQALEHGLAGC--EVLYHAAADYRLW--TRTPAAMYAANVDGTRNILEAALRRGIARV 108
Query: 125 VFSSSATAYGWP-KVVPCTEEFPL---QAMNPYGRSKLFIEEICRDVHRSDSEW-KIILL 179
V++SS G P P TE P+ + Y +SK F+ E R+ + ++++
Sbjct: 109 VYTSSVGTLGNPGNGTPGTETTPVTFADMVGHYKKSK-FLAE--REAEAFIARGLPLVIV 165
Query: 180 RYFNPVGAH-----PSGK 192
PVG H P+GK
Sbjct: 166 NPSTPVGPHDVKPTPTGK 183
Score = 50 (22.7 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR 296
I V D A GH+ A R ++G E Y LG + ++ E+ A + +G P V+
Sbjct: 204 IDVEDCARGHLLAARH---GRIG-EKYILGH-ENLTLREIFALLARLTGIPAPRVRLPHT 258
Query: 297 P 297
P
Sbjct: 259 P 259
>TIGR_CMR|GSU_0687 [details] [associations]
symbol:GSU_0687 "dihydroflavonol 4-reductase, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0045552 "dihydrokaempferol
4-reductase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0050662 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
GO:GO:0045552 HOGENOM:HOG000168005 KO:K00091 RefSeq:NP_951744.1
ProteinModelPortal:Q74FC2 GeneID:2685417 KEGG:gsu:GSU0687
PATRIC:22024129 OMA:FESSKAT ProtClustDB:CLSK827993
BioCyc:GSUL243231:GH27-722-MONOMER InterPro:IPR017829
TIGRFAMs:TIGR03466 Uniprot:Q74FC2
Length = 328
Score = 103 (41.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 53/198 (26%), Positives = 85/198 (42%)
Query: 5 ILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL 64
+ V G G+IG+ V +LL G V+ + + LAG ++ + DL
Sbjct: 3 VFVTGATGFIGASIVRELLKDGCHVRVLARPGSDR-------RNLAGL---DVEICEGDL 52
Query: 65 RDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNL 124
RD+ ALE AG + + H A + + P + N+ GT +LE G +
Sbjct: 53 RDRQALEHGLAGC--EVLYHAAADYRLW--TRTPAAMYAANVDGTRNILEAALRRGIARV 108
Query: 125 VFSSSATAYGWP-KVVPCTEEFPL---QAMNPYGRSKLFIEEICRDVHRSDSEW-KIILL 179
V++SS G P P TE P+ + Y +SK F+ E R+ + ++++
Sbjct: 109 VYTSSVGTLGNPGNGTPGTETTPVTFADMVGHYKKSK-FLAE--REAEAFIARGLPLVIV 165
Query: 180 RYFNPVGAH-----PSGK 192
PVG H P+GK
Sbjct: 166 NPSTPVGPHDVKPTPTGK 183
Score = 50 (22.7 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR 296
I V D A GH+ A R ++G E Y LG + ++ E+ A + +G P V+
Sbjct: 204 IDVEDCARGHLLAARH---GRIG-EKYILGH-ENLTLREIFALLARLTGIPAPRVRLPHT 258
Query: 297 P 297
P
Sbjct: 259 P 259
>UNIPROTKB|Q48N10 [details] [associations]
symbol:PSPPH_0937 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CP000058 GenomeReviews:CP000058_GR
RefSeq:YP_273211.1 ProteinModelPortal:Q48N10 STRING:Q48N10
GeneID:3557031 KEGG:psp:PSPPH_0937 PATRIC:19970959
HOGENOM:HOG000129432 OMA:GEDMASF ProtClustDB:CLSK908641
Uniprot:Q48N10
Length = 275
Score = 111 (44.1 bits), Expect = 0.00093, P = 0.00093
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 25 GGYKTVVVDNL-DNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAVI 83
GG V+ L A+ + ++ + E+A ++ DL DK A+ + G DA++
Sbjct: 21 GGLGKVLRKTLRPYANVLRLSDIAEMAPAVDDSEEVQVCDLADKDAVYRLIEGV--DAIV 78
Query: 84 HFAGLKAVGESVQKPLP-YFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCT 142
HF G+ SV++P N+ G + E HG K ++F+SS G+ K
Sbjct: 79 HFGGV-----SVERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIGFYKQTETI 133
Query: 143 EEF-PLQAMNPYGRSKLFIEEI 163
+ P + + YG SK + E++
Sbjct: 134 DAHSPRRPDSYYGLSKSYGEDM 155
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00099
Identities = 62/247 (25%), Positives = 99/247 (40%)
Query: 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGN---NM 57
M+K L+ G G GS+ LL GY+ + AS +V + YQ N
Sbjct: 1 MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKR--RASSFNTERVDHI--YQDPHTCNP 56
Query: 58 TFHKL--DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEV 115
FH DL D + L + + D V + + V S + P D + GT+ LLE
Sbjct: 57 KFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEA 116
Query: 116 MAAHGC-KNLVFSSSATA--YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDS 172
+ G K F ++T+ YG + +P E P +PY +KL+ I + S
Sbjct: 117 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 176
Query: 173 EWKI--ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230
+ IL + +P +GE + + + +A G L + D S +D
Sbjct: 177 MYACNGILFNHESP------RRGET--FVTRKITRAIANIAQGLESCLYLGNMD-SLRDW 227
Query: 231 TVVRDYI 237
+DY+
Sbjct: 228 GHAKDYV 234
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 78 (32.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVD 33
AK VIGG G++G H V QLL GY V D
Sbjct: 37 AKRCTVIGGSGFLGQHMVEQLLARGYAVNVFD 68
Score = 73 (30.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 53/207 (25%), Positives = 81/207 (39%)
Query: 51 GYQGNNMTFHKLDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTI 110
G+ + F DL + L G + V H A S K L ++ N GT
Sbjct: 72 GFDNPQVRFFLGDLCSRQDLYPALKGV--NTVFHCASPPP--SSNNKEL-FYRVNYIGTK 126
Query: 111 TLLEVMAAHGCKNLVFSSSATA-YGWPKVVPCTEEFPLQAMNP---YGRSKLFIEEICRD 166
++E G + L+ +SSA+ + + TE+ P AM P Y +K+ E
Sbjct: 127 NVIETCKEAGVQKLILTSSASVIFEGVDIKNGTEDLPY-AMKPIDYYTETKILQERAV-- 183
Query: 167 VHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226
+ +D E K L P G G DP+ L+P + + A + V G +
Sbjct: 184 LGANDPE-KNFLTTAIRPHGIF--GP-RDPQ-----LVPILIEAARNGKMKF-VIGNGKN 233
Query: 227 TKDGTVVRDYIHVVDLADGHIAALRKL 253
D T V + +H GHI A +L
Sbjct: 234 LVDFTFVENVVH------GHILAAEQL 254
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 347 0.00098 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 178
No. of states in DFA: 612 (65 KB)
Total size of DFA: 239 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.39u 0.12s 26.51t Elapsed: 00:00:01
Total cpu time: 26.43u 0.12s 26.55t Elapsed: 00:00:01
Start: Sat May 11 02:12:53 2013 End: Sat May 11 02:12:54 2013
WARNINGS ISSUED: 1