Query 040584
Match_columns 347
No_of_seqs 139 out of 2133
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 15:45:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040584.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040584hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3enk_A UDP-glucose 4-epimerase 100.0 4.9E-54 1.7E-58 391.4 33.8 335 2-340 5-340 (341)
2 1ek6_A UDP-galactose 4-epimera 100.0 1.2E-51 4E-56 376.7 35.5 339 1-343 1-347 (348)
3 2c20_A UDP-glucose 4-epimerase 100.0 5.9E-51 2E-55 369.4 33.7 328 2-342 1-330 (330)
4 1udb_A Epimerase, UDP-galactos 100.0 1.4E-50 4.9E-55 368.1 34.9 335 3-341 1-337 (338)
5 3ruf_A WBGU; rossmann fold, UD 100.0 5.3E-51 1.8E-55 372.8 29.8 318 1-336 24-348 (351)
6 3m2p_A UDP-N-acetylglucosamine 100.0 3.5E-50 1.2E-54 361.4 32.5 303 1-344 1-304 (311)
7 1gy8_A UDP-galactose 4-epimera 100.0 5.5E-49 1.9E-53 365.4 35.5 339 1-341 1-383 (397)
8 4egb_A DTDP-glucose 4,6-dehydr 100.0 5.4E-50 1.9E-54 365.4 27.3 315 2-341 24-342 (346)
9 3ko8_A NAD-dependent epimerase 100.0 1.1E-49 3.7E-54 358.3 25.6 305 3-338 1-311 (312)
10 3slg_A PBGP3 protein; structur 100.0 2.7E-49 9.3E-54 364.3 24.1 314 1-337 23-361 (372)
11 3ehe_A UDP-glucose 4-epimerase 100.0 1E-48 3.5E-53 352.2 26.9 305 2-342 1-308 (313)
12 1sb8_A WBPP; epimerase, 4-epim 100.0 8.7E-48 3E-52 351.7 31.6 317 2-336 27-350 (352)
13 4b8w_A GDP-L-fucose synthase; 100.0 6.1E-48 2.1E-52 347.2 28.4 301 1-338 5-316 (319)
14 2pk3_A GDP-6-deoxy-D-LYXO-4-he 100.0 1.4E-47 4.9E-52 345.8 30.7 302 2-336 12-321 (321)
15 2p5y_A UDP-glucose 4-epimerase 100.0 6.3E-48 2.2E-52 346.7 27.9 302 3-336 1-310 (311)
16 1rpn_A GDP-mannose 4,6-dehydra 100.0 2.4E-47 8.1E-52 346.4 28.0 314 1-336 13-331 (335)
17 1orr_A CDP-tyvelose-2-epimeras 100.0 4.4E-47 1.5E-51 346.2 29.7 318 2-338 1-341 (347)
18 3sxp_A ADP-L-glycero-D-mannohe 100.0 1.9E-47 6.5E-52 350.8 25.6 308 2-337 10-325 (362)
19 4id9_A Short-chain dehydrogena 100.0 2.9E-47 1E-51 347.5 26.5 296 2-337 19-341 (347)
20 2hun_A 336AA long hypothetical 100.0 1.4E-46 4.7E-51 341.5 30.3 307 2-336 3-314 (336)
21 1r6d_A TDP-glucose-4,6-dehydra 100.0 1.9E-46 6.5E-51 340.8 30.7 308 3-338 1-316 (337)
22 1oc2_A DTDP-glucose 4,6-dehydr 100.0 4.2E-46 1.4E-50 339.9 31.4 307 2-337 4-326 (348)
23 2bll_A Protein YFBG; decarboxy 100.0 1.3E-46 4.6E-51 342.7 27.7 319 3-343 1-344 (345)
24 1z45_A GAL10 bifunctional prot 100.0 4.3E-46 1.5E-50 369.3 32.4 338 2-342 11-357 (699)
25 1t2a_A GDP-mannose 4,6 dehydra 100.0 2.6E-46 9E-51 344.8 28.3 317 1-337 23-367 (375)
26 1rkx_A CDP-glucose-4,6-dehydra 100.0 1.9E-46 6.4E-51 343.5 27.1 313 2-336 9-336 (357)
27 3vps_A TUNA, NAD-dependent epi 100.0 2.4E-47 8.2E-52 344.1 20.6 301 1-339 6-308 (321)
28 2q1s_A Putative nucleotide sug 100.0 7.3E-47 2.5E-51 348.7 24.0 311 2-336 32-357 (377)
29 1e6u_A GDP-fucose synthetase; 100.0 1.7E-46 5.9E-51 338.8 24.7 300 2-338 3-317 (321)
30 2c5a_A GDP-mannose-3', 5'-epim 100.0 6E-46 2.1E-50 342.8 27.7 305 2-336 29-341 (379)
31 3sc6_A DTDP-4-dehydrorhamnose 100.0 1.7E-46 5.8E-51 333.6 23.0 278 1-336 4-287 (287)
32 2yy7_A L-threonine dehydrogena 100.0 3.6E-46 1.2E-50 335.3 24.2 306 1-334 1-312 (312)
33 1db3_A GDP-mannose 4,6-dehydra 100.0 8.3E-46 2.8E-50 341.0 25.8 317 2-336 1-352 (372)
34 2z1m_A GDP-D-mannose dehydrata 100.0 1.7E-45 5.8E-50 335.3 27.3 314 2-337 3-338 (345)
35 1i24_A Sulfolipid biosynthesis 100.0 5.6E-45 1.9E-49 339.1 31.0 324 2-340 11-381 (404)
36 1kew_A RMLB;, DTDP-D-glucose 4 100.0 1.5E-45 5E-50 338.0 26.5 306 3-336 1-337 (361)
37 1n7h_A GDP-D-mannose-4,6-dehyd 100.0 8.7E-46 3E-50 342.0 24.1 313 1-336 27-354 (381)
38 2x4g_A Nucleoside-diphosphate- 100.0 2.1E-44 7E-49 327.9 30.5 293 2-338 13-339 (342)
39 2b69_A UDP-glucuronate decarbo 100.0 6.3E-45 2.2E-49 331.6 26.3 302 2-336 27-333 (343)
40 3gpi_A NAD-dependent epimerase 100.0 1.5E-45 5.3E-50 327.3 21.1 280 1-338 2-282 (286)
41 2ydy_A Methionine adenosyltran 100.0 9.3E-45 3.2E-49 326.6 24.7 294 1-337 1-300 (315)
42 1vl0_A DTDP-4-dehydrorhamnose 100.0 8E-44 2.7E-48 317.1 24.7 274 3-335 13-292 (292)
43 1eq2_A ADP-L-glycero-D-mannohe 100.0 5.9E-44 2E-48 320.4 23.9 298 4-336 1-309 (310)
44 2x6t_A ADP-L-glycero-D-manno-h 100.0 2.2E-43 7.4E-48 323.2 27.9 299 3-336 47-356 (357)
45 1n2s_A DTDP-4-, DTDP-glucose o 100.0 3E-44 1E-48 320.8 21.3 284 3-337 1-297 (299)
46 2pzm_A Putative nucleotide sug 100.0 1.5E-43 5E-48 320.9 24.2 292 2-339 20-319 (330)
47 3ajr_A NDP-sugar epimerase; L- 100.0 4.2E-43 1.4E-47 316.0 26.1 304 4-338 1-310 (317)
48 2q1w_A Putative nucleotide sug 100.0 1.6E-42 5.5E-47 314.4 27.1 288 2-337 21-319 (333)
49 3ius_A Uncharacterized conserv 100.0 7.8E-43 2.7E-47 309.8 24.1 269 1-332 4-283 (286)
50 1z7e_A Protein aRNA; rossmann 100.0 5.8E-43 2E-47 344.4 25.6 319 2-342 315-658 (660)
51 2hrz_A AGR_C_4963P, nucleoside 100.0 3.4E-42 1.2E-46 313.4 22.7 306 2-335 14-338 (342)
52 2rh8_A Anthocyanidin reductase 100.0 6.3E-42 2.1E-46 311.1 21.1 312 1-338 8-335 (338)
53 1y1p_A ARII, aldehyde reductas 100.0 1.8E-41 6.1E-46 308.3 21.9 305 2-334 11-341 (342)
54 2c29_D Dihydroflavonol 4-reduc 100.0 7.4E-41 2.5E-45 304.0 25.1 303 2-338 5-324 (337)
55 2v6g_A Progesterone 5-beta-red 100.0 8.2E-40 2.8E-44 300.0 28.1 298 2-338 1-362 (364)
56 2p4h_X Vestitone reductase; NA 100.0 6.6E-40 2.3E-44 295.7 26.5 304 2-337 1-320 (322)
57 4b4o_A Epimerase family protei 100.0 4E-39 1.4E-43 287.6 19.2 277 3-333 1-295 (298)
58 2ggs_A 273AA long hypothetical 100.0 1.5E-38 5.2E-43 280.1 20.8 266 3-326 1-272 (273)
59 3oh8_A Nucleoside-diphosphate 100.0 9.1E-38 3.1E-42 298.8 16.4 281 2-333 147-443 (516)
60 4f6c_A AUSA reductase domain p 100.0 3.3E-37 1.1E-41 288.8 16.8 308 2-336 69-413 (427)
61 3nzo_A UDP-N-acetylglucosamine 100.0 2.6E-35 9E-40 272.9 27.3 243 2-288 35-285 (399)
62 2jl1_A Triphenylmethane reduct 100.0 3.1E-36 1E-40 267.3 20.0 259 3-331 1-286 (287)
63 2zcu_A Uncharacterized oxidore 100.0 3.3E-36 1.1E-40 266.9 18.1 259 4-333 1-285 (286)
64 3ay3_A NAD-dependent epimerase 100.0 4.7E-36 1.6E-40 263.5 17.3 237 1-331 1-238 (267)
65 4dqv_A Probable peptide synthe 100.0 4.8E-35 1.6E-39 277.4 24.5 275 2-289 73-383 (478)
66 4f6l_B AUSA reductase domain p 100.0 4.2E-36 1.4E-40 287.2 16.0 310 2-336 150-494 (508)
67 2gn4_A FLAA1 protein, UDP-GLCN 100.0 8E-35 2.7E-39 264.7 22.2 268 2-320 21-294 (344)
68 3dhn_A NAD-dependent epimerase 100.0 7.4E-35 2.5E-39 249.6 19.0 224 2-275 4-227 (227)
69 3st7_A Capsular polysaccharide 100.0 1.1E-34 3.8E-39 266.5 15.7 252 3-330 1-256 (369)
70 3i6i_A Putative leucoanthocyan 100.0 4.8E-33 1.6E-37 253.4 22.2 281 3-337 11-322 (346)
71 3rft_A Uronate dehydrogenase; 100.0 1.5E-33 5.2E-38 247.4 17.8 214 1-276 1-216 (267)
72 3e48_A Putative nucleoside-dip 100.0 2.3E-32 7.8E-37 242.7 20.3 258 3-329 1-280 (289)
73 3dqp_A Oxidoreductase YLBE; al 100.0 6.2E-33 2.1E-37 236.4 14.7 209 3-279 1-210 (219)
74 3e8x_A Putative NAD-dependent 100.0 3.9E-32 1.3E-36 234.1 17.1 214 2-281 21-235 (236)
75 2wm3_A NMRA-like family domain 100.0 4.5E-31 1.5E-35 235.5 17.9 273 2-330 5-294 (299)
76 1xq6_A Unknown protein; struct 100.0 3.1E-31 1.1E-35 230.5 15.5 230 1-286 3-252 (253)
77 3ew7_A LMO0794 protein; Q8Y8U8 100.0 1.5E-30 5E-35 221.7 17.2 219 3-275 1-220 (221)
78 3h2s_A Putative NADH-flavin re 100.0 2.1E-30 7.2E-35 221.3 18.1 217 3-273 1-220 (224)
79 1xgk_A Nitrogen metabolite rep 100.0 1.1E-29 3.9E-34 231.3 18.6 235 2-294 5-246 (352)
80 1qyd_A Pinoresinol-lariciresin 100.0 6.7E-29 2.3E-33 222.8 19.7 241 2-292 4-248 (313)
81 2r6j_A Eugenol synthase 1; phe 100.0 1.7E-28 5.8E-33 220.7 21.1 230 1-292 10-242 (318)
82 3c1o_A Eugenol synthase; pheny 100.0 2.3E-28 7.9E-33 220.1 22.1 234 1-292 3-243 (321)
83 3m1a_A Putative dehydrogenase; 100.0 1.2E-28 4E-33 217.9 18.1 248 2-285 5-267 (281)
84 2a35_A Hypothetical protein PA 100.0 2.5E-30 8.5E-35 219.4 6.8 206 1-274 4-212 (215)
85 1hdo_A Biliverdin IX beta redu 100.0 4E-28 1.4E-32 204.3 19.3 204 1-269 1-205 (206)
86 2gas_A Isoflavone reductase; N 100.0 4.9E-28 1.7E-32 216.5 21.0 236 1-292 1-242 (307)
87 1qyc_A Phenylcoumaran benzylic 100.0 1.9E-28 6.3E-33 219.4 17.6 235 2-292 4-243 (308)
88 2bgk_A Rhizome secoisolaricire 100.0 4.9E-28 1.7E-32 213.5 19.1 245 2-284 16-277 (278)
89 1fmc_A 7 alpha-hydroxysteroid 100.0 9.6E-28 3.3E-32 208.9 16.9 229 2-273 11-254 (255)
90 2dkn_A 3-alpha-hydroxysteroid 99.9 2.7E-28 9.1E-33 212.3 9.7 228 2-275 1-252 (255)
91 3svt_A Short-chain type dehydr 99.9 5.6E-28 1.9E-32 213.5 11.5 249 2-288 11-276 (281)
92 2bka_A CC3, TAT-interacting pr 99.9 1.1E-27 3.9E-32 206.8 12.5 206 2-266 18-226 (242)
93 1cyd_A Carbonyl reductase; sho 99.9 1.9E-26 6.5E-31 199.4 19.9 224 2-270 7-242 (244)
94 4e6p_A Probable sorbitol dehyd 99.9 2E-27 6.9E-32 207.5 13.7 234 3-272 9-259 (259)
95 3osu_A 3-oxoacyl-[acyl-carrier 99.9 2.7E-26 9.1E-31 198.8 20.3 225 1-269 3-244 (246)
96 1spx_A Short-chain reductase f 99.9 6.6E-27 2.3E-31 206.4 16.2 251 2-284 6-277 (278)
97 1w6u_A 2,4-dienoyl-COA reducta 99.9 4.5E-27 1.5E-31 209.9 15.3 246 2-286 26-287 (302)
98 3un1_A Probable oxidoreductase 99.9 4.4E-26 1.5E-30 198.9 20.5 216 2-272 28-258 (260)
99 2cfc_A 2-(R)-hydroxypropyl-COM 99.9 4.7E-26 1.6E-30 197.7 20.3 229 1-269 1-247 (250)
100 3d3w_A L-xylulose reductase; u 99.9 2.7E-26 9.3E-31 198.5 18.0 224 3-271 8-243 (244)
101 3awd_A GOX2181, putative polyo 99.9 9.8E-26 3.4E-30 196.8 20.5 228 3-269 14-257 (260)
102 1xq1_A Putative tropinone redu 99.9 3.3E-26 1.1E-30 200.5 17.4 226 2-270 14-256 (266)
103 3gaf_A 7-alpha-hydroxysteroid 99.9 2.7E-26 9.2E-31 199.9 16.5 229 2-273 12-255 (256)
104 3tpc_A Short chain alcohol deh 99.9 5.7E-26 1.9E-30 198.0 18.3 222 3-272 8-255 (257)
105 3tzq_B Short-chain type dehydr 99.9 2.1E-25 7.3E-30 195.8 22.0 223 2-269 11-250 (271)
106 3ai3_A NADPH-sorbose reductase 99.9 1.2E-25 4.3E-30 196.5 20.3 239 3-272 8-262 (263)
107 3lyl_A 3-oxoacyl-(acyl-carrier 99.9 1E-25 3.5E-30 195.3 19.3 227 2-271 5-246 (247)
108 3v2h_A D-beta-hydroxybutyrate 99.9 5.1E-26 1.7E-30 200.8 17.3 237 2-269 25-278 (281)
109 3s55_A Putative short-chain de 99.9 1.6E-25 5.3E-30 197.8 20.1 244 2-272 10-279 (281)
110 1uay_A Type II 3-hydroxyacyl-C 99.9 3.7E-26 1.3E-30 197.2 15.7 216 1-272 1-240 (242)
111 3i4f_A 3-oxoacyl-[acyl-carrier 99.9 9.2E-26 3.2E-30 197.5 18.4 232 1-272 6-254 (264)
112 2pd6_A Estradiol 17-beta-dehyd 99.9 2.3E-26 8E-31 201.2 14.4 234 2-275 7-261 (264)
113 2pnf_A 3-oxoacyl-[acyl-carrier 99.9 5.4E-26 1.8E-30 197.0 16.0 224 3-269 8-247 (248)
114 1edo_A Beta-keto acyl carrier 99.9 5.1E-26 1.7E-30 196.7 15.8 225 2-269 1-242 (244)
115 2hq1_A Glucose/ribitol dehydro 99.9 1.2E-25 4.1E-30 194.7 18.1 223 2-269 5-245 (247)
116 2ae2_A Protein (tropinone redu 99.9 6.6E-26 2.3E-30 198.0 16.5 233 2-272 9-257 (260)
117 3imf_A Short chain dehydrogena 99.9 2.3E-25 7.9E-30 194.1 19.5 231 2-272 6-253 (257)
118 3f9i_A 3-oxoacyl-[acyl-carrier 99.9 2.4E-25 8E-30 193.2 19.3 222 2-270 14-247 (249)
119 2zat_A Dehydrogenase/reductase 99.9 1.8E-26 6.2E-31 201.5 12.2 230 2-272 14-259 (260)
120 3r6d_A NAD-dependent epimerase 99.9 4.1E-25 1.4E-29 188.2 19.9 204 1-269 4-212 (221)
121 3qiv_A Short-chain dehydrogena 99.9 1.6E-25 5.5E-30 194.7 17.5 225 2-271 9-251 (253)
122 3oid_A Enoyl-[acyl-carrier-pro 99.9 1.3E-25 4.4E-30 195.8 16.9 229 2-271 4-248 (258)
123 3pk0_A Short-chain dehydrogena 99.9 2.5E-25 8.5E-30 194.4 18.7 229 2-271 10-253 (262)
124 4dmm_A 3-oxoacyl-[acyl-carrier 99.9 2.6E-25 8.9E-30 195.0 18.8 224 2-271 28-268 (269)
125 4dqx_A Probable oxidoreductase 99.9 2.7E-25 9.1E-30 195.7 19.0 231 2-272 27-272 (277)
126 1geg_A Acetoin reductase; SDR 99.9 1.5E-25 5.1E-30 195.3 17.0 234 1-270 1-254 (256)
127 1ja9_A 4HNR, 1,3,6,8-tetrahydr 99.9 1.4E-25 4.7E-30 197.4 16.6 234 2-269 21-273 (274)
128 3d7l_A LIN1944 protein; APC893 99.9 1.6E-25 5.6E-30 187.9 15.9 189 3-265 4-201 (202)
129 1hdc_A 3-alpha, 20 beta-hydrox 99.9 2.8E-25 9.5E-30 193.3 17.8 223 2-270 5-243 (254)
130 3a28_C L-2.3-butanediol dehydr 99.9 2.8E-25 9.5E-30 193.8 17.7 235 1-271 1-257 (258)
131 3qvo_A NMRA family protein; st 99.9 6.9E-25 2.4E-29 188.7 19.9 202 1-270 22-226 (236)
132 2q2v_A Beta-D-hydroxybutyrate 99.9 5.7E-25 1.9E-29 191.4 19.5 231 2-270 4-253 (255)
133 2o23_A HADH2 protein; HSD17B10 99.9 3.8E-25 1.3E-29 193.6 18.5 223 2-271 12-261 (265)
134 3sx2_A Putative 3-ketoacyl-(ac 99.9 2.5E-25 8.5E-30 196.2 17.3 238 2-269 13-275 (278)
135 3rih_A Short chain dehydrogena 99.9 2.3E-25 7.8E-30 197.5 17.1 229 2-271 41-284 (293)
136 4eso_A Putative oxidoreductase 99.9 1.5E-25 5.1E-30 195.0 15.6 231 3-275 9-253 (255)
137 1nff_A Putative oxidoreductase 99.9 2.9E-25 9.9E-30 193.8 17.4 219 2-271 7-240 (260)
138 3dii_A Short-chain dehydrogena 99.9 3.4E-25 1.2E-29 191.9 17.7 217 1-270 1-230 (247)
139 2d1y_A Hypothetical protein TT 99.9 5.3E-25 1.8E-29 191.7 19.0 229 2-273 6-249 (256)
140 3ftp_A 3-oxoacyl-[acyl-carrier 99.9 6E-26 2.1E-30 199.1 13.0 226 2-271 28-269 (270)
141 3afn_B Carbonyl reductase; alp 99.9 1.7E-25 5.9E-30 194.9 15.7 227 2-269 7-255 (258)
142 2ph3_A 3-oxoacyl-[acyl carrier 99.9 9.9E-26 3.4E-30 195.0 14.0 225 2-269 1-242 (245)
143 3gvc_A Oxidoreductase, probabl 99.9 4.6E-25 1.6E-29 194.2 18.3 231 2-272 29-275 (277)
144 1gee_A Glucose 1-dehydrogenase 99.9 7.8E-25 2.7E-29 191.2 19.7 224 3-270 8-251 (261)
145 1ae1_A Tropinone reductase-I; 99.9 8.4E-25 2.9E-29 192.3 19.8 232 2-270 21-268 (273)
146 3sju_A Keto reductase; short-c 99.9 2.5E-25 8.7E-30 196.2 16.3 235 2-269 24-276 (279)
147 3op4_A 3-oxoacyl-[acyl-carrier 99.9 4.3E-25 1.5E-29 191.3 17.5 221 3-270 10-246 (248)
148 3kzv_A Uncharacterized oxidore 99.9 1.4E-24 4.7E-29 188.9 20.6 232 1-270 1-249 (254)
149 3ak4_A NADH-dependent quinucli 99.9 1.9E-25 6.4E-30 195.4 15.0 221 3-270 13-261 (263)
150 3gem_A Short chain dehydrogena 99.9 1.4E-24 4.8E-29 189.3 20.4 219 2-272 27-258 (260)
151 3o38_A Short chain dehydrogena 99.9 6.3E-25 2.1E-29 192.4 18.2 227 2-269 22-265 (266)
152 2c07_A 3-oxoacyl-(acyl-carrier 99.9 5.4E-25 1.9E-29 194.7 17.9 224 2-269 44-283 (285)
153 3ucx_A Short chain dehydrogena 99.9 8.5E-25 2.9E-29 191.3 18.9 232 2-270 11-262 (264)
154 2wsb_A Galactitol dehydrogenas 99.9 2E-24 6.8E-29 187.8 20.9 225 3-269 12-251 (254)
155 2bd0_A Sepiapterin reductase; 99.9 6.2E-25 2.1E-29 189.9 17.6 219 1-271 1-241 (244)
156 1x1t_A D(-)-3-hydroxybutyrate 99.9 6.3E-25 2.1E-29 191.7 17.6 237 2-269 4-257 (260)
157 2fwm_X 2,3-dihydro-2,3-dihydro 99.9 1.4E-24 4.8E-29 188.4 19.6 225 2-270 7-247 (250)
158 4da9_A Short-chain dehydrogena 99.9 5.5E-25 1.9E-29 194.1 17.2 226 3-271 30-277 (280)
159 2rhc_B Actinorhodin polyketide 99.9 3.8E-25 1.3E-29 194.8 16.2 231 3-269 23-274 (277)
160 3rd5_A Mypaa.01249.C; ssgcid, 99.9 8.2E-25 2.8E-29 194.2 18.1 230 2-268 16-254 (291)
161 1h5q_A NADP-dependent mannitol 99.9 5.2E-25 1.8E-29 192.7 16.6 233 2-270 14-263 (265)
162 1iy8_A Levodione reductase; ox 99.9 6.7E-25 2.3E-29 192.3 17.2 237 2-272 13-266 (267)
163 4fc7_A Peroxisomal 2,4-dienoyl 99.9 1.1E-25 3.7E-30 198.4 12.1 233 2-273 27-274 (277)
164 3orf_A Dihydropteridine reduct 99.9 5.6E-25 1.9E-29 191.0 16.3 209 1-271 21-245 (251)
165 3tox_A Short chain dehydrogena 99.9 8E-25 2.7E-29 192.9 17.3 233 3-273 9-257 (280)
166 3pxx_A Carveol dehydrogenase; 99.9 3.5E-25 1.2E-29 196.2 15.1 248 2-272 10-286 (287)
167 3tfo_A Putative 3-oxoacyl-(acy 99.9 1.2E-24 4E-29 190.1 18.1 171 2-187 4-187 (264)
168 4e3z_A Putative oxidoreductase 99.9 6.6E-25 2.3E-29 192.9 16.6 226 2-268 26-271 (272)
169 2uvd_A 3-oxoacyl-(acyl-carrier 99.9 9.8E-25 3.3E-29 188.9 17.4 225 2-269 4-244 (246)
170 2yut_A Putative short-chain ox 99.9 5.6E-26 1.9E-30 191.5 9.3 191 3-252 1-198 (207)
171 4ibo_A Gluconate dehydrogenase 99.9 6.8E-26 2.3E-30 198.9 10.2 227 2-272 26-270 (271)
172 3pgx_A Carveol dehydrogenase; 99.9 2.2E-24 7.6E-29 190.3 20.0 238 2-269 15-277 (280)
173 3n74_A 3-ketoacyl-(acyl-carrie 99.9 5.2E-25 1.8E-29 192.4 15.7 230 2-273 9-258 (261)
174 3ijr_A Oxidoreductase, short c 99.9 5.9E-25 2E-29 194.9 16.1 227 2-270 47-288 (291)
175 3grp_A 3-oxoacyl-(acyl carrier 99.9 5.1E-25 1.7E-29 192.8 15.5 221 2-269 27-263 (266)
176 2wyu_A Enoyl-[acyl carrier pro 99.9 6.2E-25 2.1E-29 191.9 16.0 232 2-275 8-258 (261)
177 3ctm_A Carbonyl reductase; alc 99.9 1.5E-24 5E-29 191.4 18.5 227 2-270 34-277 (279)
178 1mxh_A Pteridine reductase 2; 99.9 2E-24 6.7E-29 190.3 19.3 225 3-270 12-272 (276)
179 3uf0_A Short-chain dehydrogena 99.9 3.5E-25 1.2E-29 194.5 14.3 228 2-271 31-272 (273)
180 2z1n_A Dehydrogenase; reductas 99.9 8E-25 2.7E-29 191.1 16.3 237 3-269 8-258 (260)
181 4iiu_A 3-oxoacyl-[acyl-carrier 99.9 1.5E-24 5.3E-29 190.0 18.2 224 1-268 25-265 (267)
182 3v8b_A Putative dehydrogenase, 99.9 1.4E-24 4.7E-29 191.8 17.9 233 3-269 29-279 (283)
183 2ew8_A (S)-1-phenylethanol deh 99.9 2.2E-24 7.4E-29 187.1 18.8 224 2-269 7-246 (249)
184 3uxy_A Short-chain dehydrogena 99.9 3.9E-25 1.3E-29 193.5 14.0 224 2-272 28-266 (266)
185 1xhl_A Short-chain dehydrogena 99.9 1.3E-24 4.5E-29 193.2 17.7 250 3-283 27-294 (297)
186 3f1l_A Uncharacterized oxidore 99.9 2.9E-24 9.9E-29 186.6 19.3 223 2-274 12-251 (252)
187 4egf_A L-xylulose reductase; s 99.9 6.7E-25 2.3E-29 192.2 15.4 230 2-271 20-265 (266)
188 1zk4_A R-specific alcohol dehy 99.9 1.7E-24 6E-29 187.9 17.9 226 2-270 6-249 (251)
189 3cxt_A Dehydrogenase with diff 99.9 3.6E-24 1.2E-28 189.8 20.2 230 2-269 34-281 (291)
190 3r3s_A Oxidoreductase; structu 99.9 7.3E-25 2.5E-29 194.6 15.6 229 2-271 49-293 (294)
191 3qlj_A Short chain dehydrogena 99.9 1.6E-25 5.4E-30 201.6 11.3 240 3-289 28-315 (322)
192 3t4x_A Oxidoreductase, short c 99.9 2.9E-24 9.8E-29 188.3 18.5 243 3-272 11-265 (267)
193 3r1i_A Short-chain type dehydr 99.9 4.5E-24 1.5E-28 187.8 19.4 227 2-270 32-274 (276)
194 1vl8_A Gluconate 5-dehydrogena 99.9 4.1E-24 1.4E-28 187.2 19.1 225 2-269 21-264 (267)
195 3ged_A Short-chain dehydrogena 99.9 6.6E-24 2.3E-28 182.0 19.8 216 1-269 1-229 (247)
196 4iin_A 3-ketoacyl-acyl carrier 99.9 1.8E-24 6.2E-29 189.9 16.8 225 2-269 29-269 (271)
197 1qsg_A Enoyl-[acyl-carrier-pro 99.9 2.8E-24 9.4E-29 188.2 17.8 228 3-272 10-257 (265)
198 3ezl_A Acetoacetyl-COA reducta 99.9 1.9E-24 6.4E-29 188.3 16.7 227 2-271 13-255 (256)
199 3gk3_A Acetoacetyl-COA reducta 99.9 7.1E-25 2.4E-29 192.3 14.0 229 2-272 25-269 (269)
200 1xkq_A Short-chain reductase f 99.9 2.3E-24 7.9E-29 190.2 17.4 240 2-271 6-264 (280)
201 2dtx_A Glucose 1-dehydrogenase 99.9 1.7E-24 5.8E-29 189.3 16.1 220 2-269 8-246 (264)
202 1hxh_A 3BETA/17BETA-hydroxyste 99.9 2.3E-24 7.9E-29 187.4 16.8 226 2-269 6-248 (253)
203 2ehd_A Oxidoreductase, oxidore 99.9 4.3E-24 1.5E-28 183.4 18.2 168 1-187 4-186 (234)
204 3edm_A Short chain dehydrogena 99.9 5.7E-24 2E-28 185.5 19.1 232 2-274 8-253 (259)
205 3vtz_A Glucose 1-dehydrogenase 99.9 2E-24 6.8E-29 189.4 15.8 226 2-270 14-254 (269)
206 2p91_A Enoyl-[acyl-carrier-pro 99.9 7.1E-24 2.4E-28 187.5 19.4 225 3-269 22-266 (285)
207 3lf2_A Short chain oxidoreduct 99.9 5.9E-24 2E-28 186.0 18.6 240 2-270 8-262 (265)
208 2b4q_A Rhamnolipids biosynthes 99.9 1.7E-24 5.9E-29 190.5 15.2 224 2-269 29-274 (276)
209 2gdz_A NAD+-dependent 15-hydro 99.9 1.4E-24 4.9E-29 190.2 14.4 233 3-275 8-257 (267)
210 3v2g_A 3-oxoacyl-[acyl-carrier 99.9 1.6E-23 5.3E-28 183.8 20.8 225 2-269 31-269 (271)
211 2nm0_A Probable 3-oxacyl-(acyl 99.9 2.4E-24 8.1E-29 187.1 15.3 216 2-271 21-251 (253)
212 1g0o_A Trihydroxynaphthalene r 99.9 3.5E-24 1.2E-28 189.4 16.6 237 2-269 29-281 (283)
213 3h7a_A Short chain dehydrogena 99.9 6.1E-24 2.1E-28 184.5 17.7 208 2-252 7-229 (252)
214 3l77_A Short-chain alcohol deh 99.9 2.2E-23 7.5E-28 179.2 21.0 219 2-270 2-232 (235)
215 3rku_A Oxidoreductase YMR226C; 99.9 2.6E-24 9E-29 190.2 15.3 228 2-270 33-279 (287)
216 3tjr_A Short chain dehydrogena 99.9 1.9E-23 6.4E-28 186.2 21.0 214 3-252 32-265 (301)
217 2ekp_A 2-deoxy-D-gluconate 3-d 99.9 1.1E-23 3.7E-28 181.6 18.8 221 1-269 1-236 (239)
218 3asu_A Short-chain dehydrogena 99.9 2.9E-23 9.7E-28 179.8 21.4 219 3-268 1-236 (248)
219 3t7c_A Carveol dehydrogenase; 99.9 2.2E-23 7.5E-28 185.6 21.1 238 2-271 28-298 (299)
220 2ag5_A DHRS6, dehydrogenase/re 99.9 5.4E-24 1.9E-28 184.2 16.7 226 2-269 6-243 (246)
221 3ek2_A Enoyl-(acyl-carrier-pro 99.9 2.7E-24 9.3E-29 188.8 15.0 235 2-278 14-268 (271)
222 3uve_A Carveol dehydrogenase ( 99.9 3.5E-23 1.2E-27 183.2 22.2 243 2-271 11-285 (286)
223 3rwb_A TPLDH, pyridoxal 4-dehy 99.9 1.3E-24 4.3E-29 188.3 12.6 223 2-269 6-244 (247)
224 1yxm_A Pecra, peroxisomal tran 99.9 6.9E-24 2.4E-28 189.3 17.3 234 2-272 18-268 (303)
225 3tsc_A Putative oxidoreductase 99.9 1.4E-23 4.8E-28 184.8 19.0 237 3-269 12-274 (277)
226 3rkr_A Short chain oxidoreduct 99.9 1.5E-23 5E-28 183.2 18.8 211 3-264 30-256 (262)
227 1xg5_A ARPG836; short chain de 99.9 7.1E-24 2.4E-28 187.0 16.9 174 3-187 33-225 (279)
228 4imr_A 3-oxoacyl-(acyl-carrier 99.9 1.8E-24 6.1E-29 190.2 12.9 228 2-268 33-274 (275)
229 3tl3_A Short-chain type dehydr 99.9 4.2E-24 1.4E-28 186.2 15.2 221 2-272 9-255 (257)
230 2nwq_A Probable short-chain de 99.9 1.9E-23 6.6E-28 183.3 19.1 223 1-268 20-259 (272)
231 3u9l_A 3-oxoacyl-[acyl-carrier 99.9 3.2E-23 1.1E-27 186.3 20.9 175 3-187 6-196 (324)
232 1uls_A Putative 3-oxoacyl-acyl 99.9 2.5E-23 8.5E-28 179.9 19.3 219 2-270 5-239 (245)
233 4dyv_A Short-chain dehydrogena 99.9 1.7E-23 5.7E-28 183.7 18.3 206 2-253 28-251 (272)
234 3k31_A Enoyl-(acyl-carrier-pro 99.9 3.3E-23 1.1E-27 184.1 20.3 229 2-272 30-277 (296)
235 1uzm_A 3-oxoacyl-[acyl-carrier 99.9 2.2E-24 7.7E-29 186.8 12.3 216 2-271 15-245 (247)
236 1ooe_A Dihydropteridine reduct 99.9 7.3E-24 2.5E-28 182.3 15.4 208 2-269 3-228 (236)
237 3is3_A 17BETA-hydroxysteroid d 99.9 1.7E-23 5.9E-28 183.6 18.0 237 2-269 18-269 (270)
238 3oec_A Carveol dehydrogenase ( 99.9 2.4E-23 8.2E-28 186.8 19.1 242 2-270 46-314 (317)
239 3p19_A BFPVVD8, putative blue 99.9 5.4E-24 1.9E-28 186.2 14.3 206 1-252 15-235 (266)
240 1fjh_A 3alpha-hydroxysteroid d 99.9 1.1E-24 3.7E-29 189.8 9.7 225 2-271 1-250 (257)
241 1yde_A Retinal dehydrogenase/r 99.9 3E-24 1E-28 188.4 12.5 232 2-275 9-255 (270)
242 2pd4_A Enoyl-[acyl-carrier-pro 99.9 2.5E-23 8.6E-28 183.1 18.0 226 3-270 7-251 (275)
243 3u5t_A 3-oxoacyl-[acyl-carrier 99.9 4.1E-23 1.4E-27 180.7 19.1 224 3-268 28-265 (267)
244 3grk_A Enoyl-(acyl-carrier-pro 99.9 6.4E-23 2.2E-27 182.0 20.5 229 2-272 31-278 (293)
245 1yo6_A Putative carbonyl reduc 99.9 1.9E-23 6.3E-28 181.1 16.7 212 2-267 3-245 (250)
246 3nyw_A Putative oxidoreductase 99.9 1.1E-23 3.8E-28 182.6 15.1 204 2-252 7-224 (250)
247 2a4k_A 3-oxoacyl-[acyl carrier 99.9 2E-23 6.8E-28 182.4 16.7 224 2-272 6-242 (263)
248 3ksu_A 3-oxoacyl-acyl carrier 99.9 7.9E-24 2.7E-28 184.9 14.1 231 3-273 12-255 (262)
249 4e4y_A Short chain dehydrogena 99.9 1.8E-23 6E-28 180.8 16.2 223 2-270 4-242 (244)
250 3ppi_A 3-hydroxyacyl-COA dehyd 99.9 2.5E-23 8.5E-28 183.7 17.3 223 3-272 31-279 (281)
251 2qhx_A Pteridine reductase 1; 99.9 4.8E-23 1.7E-27 185.6 19.4 226 3-271 47-325 (328)
252 3oig_A Enoyl-[acyl-carrier-pro 99.9 4.4E-23 1.5E-27 180.6 18.6 229 3-271 8-255 (266)
253 3gdg_A Probable NADP-dependent 99.9 8.9E-23 3.1E-27 178.8 20.4 229 2-270 20-265 (267)
254 4fn4_A Short chain dehydrogena 99.9 8.1E-23 2.8E-27 176.0 19.4 230 2-270 7-252 (254)
255 1zem_A Xylitol dehydrogenase; 99.9 3.4E-23 1.2E-27 180.9 17.3 171 2-187 7-193 (262)
256 3nrc_A Enoyl-[acyl-carrier-pro 99.9 4.2E-23 1.4E-27 182.1 18.1 227 2-271 26-273 (280)
257 1o5i_A 3-oxoacyl-(acyl carrier 99.9 1.1E-23 3.9E-28 182.5 14.1 214 2-270 19-245 (249)
258 3guy_A Short-chain dehydrogena 99.9 1.9E-23 6.4E-28 179.0 15.2 211 2-265 1-222 (230)
259 3uce_A Dehydrogenase; rossmann 99.9 8.5E-24 2.9E-28 180.3 12.9 207 3-271 7-222 (223)
260 1sby_A Alcohol dehydrogenase; 99.9 4.9E-23 1.7E-27 179.1 17.9 220 2-269 5-240 (254)
261 2x9g_A PTR1, pteridine reducta 99.9 6.2E-23 2.1E-27 181.8 18.8 225 2-270 23-284 (288)
262 3ioy_A Short-chain dehydrogena 99.9 3.3E-23 1.1E-27 186.0 17.0 172 3-187 9-201 (319)
263 4dry_A 3-oxoacyl-[acyl-carrier 99.9 6.3E-23 2.2E-27 180.9 17.7 208 3-252 34-259 (281)
264 1yb1_A 17-beta-hydroxysteroid 99.9 1.1E-23 3.9E-28 185.0 12.7 199 2-252 31-247 (272)
265 1dhr_A Dihydropteridine reduct 99.9 4.5E-23 1.5E-27 177.9 15.9 207 2-269 7-231 (241)
266 1sny_A Sniffer CG10964-PA; alp 99.9 1.8E-22 6.3E-27 176.7 19.9 210 2-267 21-262 (267)
267 3icc_A Putative 3-oxoacyl-(acy 99.9 5.4E-23 1.9E-27 178.9 16.0 228 2-270 7-254 (255)
268 3i1j_A Oxidoreductase, short c 99.9 6.6E-23 2.3E-27 177.5 16.2 214 2-265 14-246 (247)
269 3zv4_A CIS-2,3-dihydrobiphenyl 99.9 5E-23 1.7E-27 181.6 15.6 232 2-270 5-256 (281)
270 3sc4_A Short chain dehydrogena 99.9 3.9E-22 1.3E-26 176.3 20.2 216 2-266 9-246 (285)
271 3l6e_A Oxidoreductase, short-c 99.9 8.6E-23 2.9E-27 175.4 15.3 197 2-252 3-213 (235)
272 1wma_A Carbonyl reductase [NAD 99.9 9.5E-23 3.2E-27 179.2 15.1 217 2-264 4-269 (276)
273 1e7w_A Pteridine reductase; di 99.9 3.2E-22 1.1E-26 177.4 18.5 226 3-271 10-288 (291)
274 2jah_A Clavulanic acid dehydro 99.9 2.6E-22 9E-27 173.7 17.1 170 2-187 7-191 (247)
275 4b79_A PA4098, probable short- 99.9 2E-22 6.7E-27 171.7 15.5 221 2-269 11-239 (242)
276 1zmt_A Haloalcohol dehalogenas 99.9 1.6E-22 5.6E-27 175.8 14.6 231 2-270 1-244 (254)
277 4fgs_A Probable dehydrogenase 99.9 2.5E-22 8.6E-27 174.6 15.0 228 3-269 30-270 (273)
278 1oaa_A Sepiapterin reductase; 99.9 2.1E-21 7.3E-26 169.2 20.8 228 2-266 6-258 (259)
279 4g81_D Putative hexonate dehyd 99.9 1.3E-22 4.4E-27 174.8 12.6 225 2-269 9-251 (255)
280 1xu9_A Corticosteroid 11-beta- 99.9 7.2E-22 2.5E-26 174.7 17.3 202 2-252 28-245 (286)
281 3kvo_A Hydroxysteroid dehydrog 99.9 2.7E-21 9.1E-26 175.1 21.2 215 2-266 45-280 (346)
282 4gkb_A 3-oxoacyl-[acyl-carrier 99.9 2.2E-21 7.4E-26 167.8 18.7 231 3-270 8-251 (258)
283 3e03_A Short chain dehydrogena 99.9 3.4E-21 1.2E-25 169.3 18.6 213 2-263 6-240 (274)
284 3e9n_A Putative short-chain de 99.9 2.3E-22 8E-27 173.8 10.6 207 2-265 5-225 (245)
285 4hp8_A 2-deoxy-D-gluconate 3-d 99.9 1.3E-21 4.5E-26 166.9 13.5 221 2-268 9-243 (247)
286 2h7i_A Enoyl-[acyl-carrier-pro 99.9 3.3E-21 1.1E-25 169.0 15.1 231 3-270 8-265 (269)
287 4fs3_A Enoyl-[acyl-carrier-pro 99.9 1.3E-20 4.6E-25 163.7 18.5 228 2-269 6-252 (256)
288 3o26_A Salutaridine reductase; 99.9 3.2E-21 1.1E-25 172.4 14.6 183 2-187 12-270 (311)
289 2qq5_A DHRS1, dehydrogenase/re 99.9 9.4E-21 3.2E-25 165.2 16.6 170 2-187 5-197 (260)
290 1jtv_A 17 beta-hydroxysteroid 99.9 6.1E-21 2.1E-25 171.8 14.7 175 2-187 2-191 (327)
291 1zmo_A Halohydrin dehalogenase 99.8 2.1E-20 7.3E-25 161.4 16.3 222 2-269 1-242 (244)
292 3u0b_A Oxidoreductase, short c 99.8 1.3E-20 4.5E-25 176.3 15.6 222 2-269 213-450 (454)
293 1gz6_A Estradiol 17 beta-dehyd 99.8 9.1E-21 3.1E-25 169.9 13.4 271 2-338 9-304 (319)
294 2fr1_A Erythromycin synthase, 99.8 4.1E-20 1.4E-24 174.6 18.1 203 2-252 226-440 (486)
295 4h15_A Short chain alcohol deh 99.8 1.1E-19 3.8E-24 157.6 17.0 221 3-269 12-257 (261)
296 2z5l_A Tylkr1, tylactone synth 99.8 1.1E-18 3.7E-23 165.4 19.7 202 2-252 259-470 (511)
297 1y7t_A Malate dehydrogenase; N 99.8 1.4E-20 4.9E-25 169.3 5.1 172 2-188 4-187 (327)
298 3mje_A AMPHB; rossmann fold, o 99.8 1.5E-18 5.2E-23 163.4 16.1 170 1-187 238-420 (496)
299 1d7o_A Enoyl-[acyl-carrier pro 99.8 6.7E-19 2.3E-23 156.5 12.9 231 2-270 8-286 (297)
300 3oml_A GH14720P, peroxisomal m 99.8 1.6E-18 5.6E-23 168.2 11.6 210 2-268 19-252 (613)
301 3qp9_A Type I polyketide synth 99.7 9.4E-18 3.2E-22 159.7 14.0 166 2-184 251-444 (525)
302 2o2s_A Enoyl-acyl carrier redu 99.7 1.5E-17 5.1E-22 149.0 11.5 235 3-269 10-292 (315)
303 2ptg_A Enoyl-acyl carrier redu 99.7 1.2E-17 4E-22 149.9 10.8 236 3-270 10-306 (319)
304 3lt0_A Enoyl-ACP reductase; tr 99.7 3.9E-17 1.3E-21 147.1 12.2 175 2-187 2-223 (329)
305 2et6_A (3R)-hydroxyacyl-COA de 99.7 9.6E-16 3.3E-20 148.3 16.0 212 2-269 322-546 (604)
306 2et6_A (3R)-hydroxyacyl-COA de 99.6 4.9E-15 1.7E-19 143.3 18.3 227 2-285 8-276 (604)
307 3zu3_A Putative reductase YPO4 99.6 3E-15 1E-19 135.2 14.0 173 2-187 47-283 (405)
308 2uv8_A Fatty acid synthase sub 99.6 7.9E-15 2.7E-19 153.6 19.0 172 2-186 675-874 (1887)
309 2uv9_A Fatty acid synthase alp 99.6 1.6E-14 5.6E-19 150.9 17.7 171 2-185 652-848 (1878)
310 2pff_A Fatty acid synthase sub 99.6 1.8E-15 6.3E-20 153.6 9.6 172 2-186 476-675 (1688)
311 3slk_A Polyketide synthase ext 99.6 1.1E-14 3.6E-19 145.1 14.1 167 2-187 530-709 (795)
312 3s8m_A Enoyl-ACP reductase; ro 99.6 8.3E-15 2.8E-19 133.5 11.6 173 2-187 61-297 (422)
313 4eue_A Putative reductase CA_C 99.6 2.5E-14 8.4E-19 131.4 12.5 175 2-187 60-297 (418)
314 2vz8_A Fatty acid synthase; tr 99.4 2.3E-12 7.8E-17 141.6 15.1 169 2-184 1884-2063(2512)
315 3ic5_A Putative saccharopine d 99.4 3.2E-12 1.1E-16 96.8 10.0 96 1-127 4-100 (118)
316 3zen_D Fatty acid synthase; tr 99.2 2.1E-10 7.1E-15 126.3 19.3 173 2-186 2136-2342(3089)
317 1b8p_A Protein (malate dehydro 99.2 1.5E-11 5.3E-16 110.1 6.5 168 3-188 6-190 (329)
318 1smk_A Malate dehydrogenase, g 99.1 5.6E-10 1.9E-14 99.8 13.3 117 2-130 8-126 (326)
319 1hye_A L-lactate/malate dehydr 99.1 5.1E-10 1.8E-14 99.5 10.7 172 3-187 1-177 (313)
320 1o6z_A MDH, malate dehydrogena 99.0 3.1E-09 1E-13 94.0 11.8 116 3-130 1-120 (303)
321 1lu9_A Methylene tetrahydromet 99.0 8.7E-10 3E-14 97.0 6.9 81 2-89 119-199 (287)
322 4ina_A Saccharopine dehydrogen 98.9 1.1E-08 3.7E-13 94.3 12.0 102 2-126 1-105 (405)
323 3llv_A Exopolyphosphatase-rela 98.8 2.8E-08 9.6E-13 77.4 11.3 99 2-129 6-104 (141)
324 4ggo_A Trans-2-enoyl-COA reduc 98.8 5.1E-08 1.7E-12 87.4 13.9 170 3-185 51-281 (401)
325 2hmt_A YUAA protein; RCK, KTN, 98.8 9.5E-09 3.3E-13 80.2 8.1 101 2-131 6-107 (144)
326 1lss_A TRK system potassium up 98.7 1.3E-07 4.4E-12 73.3 11.7 97 3-128 5-102 (140)
327 3abi_A Putative uncharacterize 98.7 1E-07 3.5E-12 86.7 10.6 93 2-128 16-108 (365)
328 1ff9_A Saccharopine reductase; 98.7 3.3E-08 1.1E-12 92.1 7.5 106 2-121 3-117 (450)
329 1id1_A Putative potassium chan 98.5 2.3E-06 7.9E-11 67.5 13.7 76 2-87 3-80 (153)
330 1mld_A Malate dehydrogenase; o 98.5 4E-07 1.4E-11 80.7 10.2 115 3-129 1-118 (314)
331 5mdh_A Malate dehydrogenase; o 98.5 1.3E-07 4.4E-12 84.3 6.3 116 3-129 4-130 (333)
332 2axq_A Saccharopine dehydrogen 98.5 8.6E-07 2.9E-11 82.8 10.9 108 2-121 23-137 (467)
333 2gk4_A Conserved hypothetical 98.4 3.7E-07 1.3E-11 76.4 6.7 77 2-91 3-97 (232)
334 2g1u_A Hypothetical protein TM 98.4 1.7E-06 5.8E-11 68.4 10.2 100 2-130 19-120 (155)
335 1u7z_A Coenzyme A biosynthesis 98.4 6E-07 2E-11 75.0 7.7 75 2-91 8-100 (226)
336 3l4b_C TRKA K+ channel protien 98.3 5.8E-06 2E-10 69.3 11.3 73 3-87 1-74 (218)
337 3c85_A Putative glutathione-re 98.3 3.8E-06 1.3E-10 68.3 9.8 73 2-87 39-114 (183)
338 3fwz_A Inner membrane protein 98.3 2.7E-06 9.2E-11 66.0 8.1 74 1-87 6-80 (140)
339 3fi9_A Malate dehydrogenase; s 98.2 8.3E-06 2.8E-10 72.8 10.1 116 2-129 8-127 (343)
340 1ur5_A Malate dehydrogenase; o 98.2 1.1E-05 3.9E-10 71.2 10.9 117 1-129 1-119 (309)
341 3pqe_A L-LDH, L-lactate dehydr 98.1 2.4E-05 8.2E-10 69.4 11.6 116 2-129 5-123 (326)
342 2z2v_A Hypothetical protein PH 98.1 1.2E-05 4.2E-10 72.7 9.4 93 2-128 16-108 (365)
343 2aef_A Calcium-gated potassium 98.0 2.1E-05 7.3E-10 66.5 9.4 96 2-129 9-106 (234)
344 1pqw_A Polyketide synthase; ro 98.0 1E-05 3.5E-10 66.5 6.0 75 2-87 39-116 (198)
345 1jay_A Coenzyme F420H2:NADP+ o 97.9 1E-05 3.5E-10 67.4 5.3 73 3-87 1-73 (212)
346 3vku_A L-LDH, L-lactate dehydr 97.9 5.7E-05 2E-09 66.9 9.9 115 2-129 9-126 (326)
347 1pzg_A LDH, lactate dehydrogen 97.9 0.00019 6.4E-09 64.0 13.3 117 3-129 10-132 (331)
348 1jw9_B Molybdopterin biosynthe 97.9 0.00013 4.5E-09 62.2 11.4 106 3-132 32-157 (249)
349 3tnl_A Shikimate dehydrogenase 97.8 8.4E-05 2.9E-09 65.5 9.8 80 2-89 154-237 (315)
350 3p7m_A Malate dehydrogenase; p 97.8 0.00019 6.4E-09 63.6 11.9 117 2-129 5-123 (321)
351 3l9w_A Glutathione-regulated p 97.8 8.6E-05 2.9E-09 68.2 10.0 73 2-87 4-77 (413)
352 1oju_A MDH, malate dehydrogena 97.8 0.00015 5E-09 63.4 10.7 116 3-129 1-119 (294)
353 1dih_A Dihydrodipicolinate red 97.8 1.7E-05 5.7E-10 68.7 4.6 34 3-36 6-41 (273)
354 3nep_X Malate dehydrogenase; h 97.7 0.00021 7.1E-09 63.0 11.1 116 3-129 1-119 (314)
355 4aj2_A L-lactate dehydrogenase 97.7 0.0003 1E-08 62.4 12.2 116 2-129 19-137 (331)
356 3tl2_A Malate dehydrogenase; c 97.7 0.00021 7.2E-09 63.0 11.1 116 3-129 9-128 (315)
357 2eez_A Alanine dehydrogenase; 97.7 4.3E-05 1.5E-09 69.3 6.7 75 2-89 166-240 (369)
358 1wly_A CAAR, 2-haloacrylate re 97.7 7.8E-05 2.7E-09 66.6 8.2 76 2-88 146-224 (333)
359 3gvi_A Malate dehydrogenase; N 97.7 0.00041 1.4E-08 61.4 12.3 116 2-129 7-125 (324)
360 2eih_A Alcohol dehydrogenase; 97.7 0.00011 3.7E-09 65.9 8.6 75 2-87 167-244 (343)
361 1qor_A Quinone oxidoreductase; 97.7 6.7E-05 2.3E-09 66.8 7.1 75 2-87 141-218 (327)
362 3ldh_A Lactate dehydrogenase; 97.7 0.00061 2.1E-08 60.2 13.0 115 2-129 21-139 (330)
363 2hcy_A Alcohol dehydrogenase 1 97.7 5.6E-05 1.9E-09 68.0 6.5 75 2-88 170-248 (347)
364 3d0o_A L-LDH 1, L-lactate dehy 97.7 0.00045 1.5E-08 61.1 12.0 114 3-128 7-123 (317)
365 2x0j_A Malate dehydrogenase; o 97.7 0.00043 1.5E-08 60.3 11.4 116 3-129 1-119 (294)
366 2hjr_A Malate dehydrogenase; m 97.6 0.00085 2.9E-08 59.6 13.2 116 1-129 13-132 (328)
367 1v3u_A Leukotriene B4 12- hydr 97.6 0.00017 5.9E-09 64.3 8.8 75 2-87 146-223 (333)
368 1ez4_A Lactate dehydrogenase; 97.6 0.00047 1.6E-08 61.0 11.4 114 3-129 6-122 (318)
369 2j8z_A Quinone oxidoreductase; 97.6 0.00014 4.6E-09 65.6 7.9 76 2-88 163-241 (354)
370 2nqt_A N-acetyl-gamma-glutamyl 97.6 2.3E-05 7.9E-10 70.2 2.7 100 2-132 9-114 (352)
371 1ldn_A L-lactate dehydrogenase 97.6 0.00074 2.5E-08 59.7 12.3 115 2-128 6-123 (316)
372 1yb5_A Quinone oxidoreductase; 97.6 0.00015 5.3E-09 65.2 8.0 76 2-88 171-249 (351)
373 1y6j_A L-lactate dehydrogenase 97.6 0.00033 1.1E-08 62.0 9.9 112 3-127 8-122 (318)
374 4h7p_A Malate dehydrogenase; s 97.6 0.0011 3.6E-08 59.2 12.8 116 3-129 25-151 (345)
375 1t2d_A LDH-P, L-lactate dehydr 97.5 0.00098 3.4E-08 59.0 12.5 118 2-129 4-127 (322)
376 2zqz_A L-LDH, L-lactate dehydr 97.5 0.00054 1.8E-08 60.8 10.7 115 2-129 9-126 (326)
377 3hhp_A Malate dehydrogenase; M 97.5 0.00061 2.1E-08 60.0 10.9 115 3-129 1-119 (312)
378 2hjs_A USG-1 protein homolog; 97.5 0.00014 4.8E-09 65.0 6.6 94 2-131 6-102 (340)
379 2zb4_A Prostaglandin reductase 97.5 0.00015 5.1E-09 65.4 6.5 74 3-87 162-239 (357)
380 3pi7_A NADH oxidoreductase; gr 97.5 0.00031 1.1E-08 63.1 8.3 75 3-88 166-243 (349)
381 1nyt_A Shikimate 5-dehydrogena 97.5 9.5E-05 3.2E-09 64.0 4.7 74 2-90 119-192 (271)
382 4b7c_A Probable oxidoreductase 97.5 0.00018 6.3E-09 64.2 6.7 76 2-88 150-228 (336)
383 2v6b_A L-LDH, L-lactate dehydr 97.5 0.0007 2.4E-08 59.5 10.3 113 3-128 1-116 (304)
384 3qwb_A Probable quinone oxidor 97.4 0.00024 8.4E-09 63.3 7.2 76 2-88 149-227 (334)
385 3jyn_A Quinone oxidoreductase; 97.4 0.00024 8.3E-09 63.1 7.2 76 2-88 141-219 (325)
386 1hyh_A L-hicdh, L-2-hydroxyiso 97.4 0.0013 4.5E-08 57.9 11.8 116 3-128 2-122 (309)
387 3gg2_A Sugar dehydrogenase, UD 97.4 0.00023 7.9E-09 66.1 7.1 40 1-41 1-40 (450)
388 3pwk_A Aspartate-semialdehyde 97.4 0.00011 3.6E-09 66.1 4.6 95 1-131 1-98 (366)
389 3jyo_A Quinate/shikimate dehyd 97.4 0.00037 1.3E-08 60.5 7.8 78 2-89 127-205 (283)
390 3gxh_A Putative phosphatase (D 97.4 0.00015 5E-09 57.3 4.8 75 11-89 25-108 (157)
391 3gms_A Putative NADPH:quinone 97.4 0.00039 1.3E-08 62.2 8.1 76 2-88 145-223 (340)
392 1lnq_A MTHK channels, potassiu 97.4 0.00035 1.2E-08 62.4 7.8 69 3-86 116-185 (336)
393 1zud_1 Adenylyltransferase THI 97.4 0.0019 6.4E-08 55.1 11.9 109 2-134 28-156 (251)
394 3t4e_A Quinate/shikimate dehyd 97.4 0.00063 2.2E-08 59.8 9.1 80 2-89 148-231 (312)
395 4g65_A TRK system potassium up 97.4 0.00021 7.3E-09 66.6 6.4 73 2-85 3-75 (461)
396 4dup_A Quinone oxidoreductase; 97.4 0.00041 1.4E-08 62.4 8.0 75 2-88 168-245 (353)
397 4eye_A Probable oxidoreductase 97.4 0.00054 1.8E-08 61.4 8.6 77 2-88 160-237 (342)
398 2j3h_A NADP-dependent oxidored 97.4 0.00036 1.2E-08 62.6 7.3 76 2-88 156-235 (345)
399 1xyg_A Putative N-acetyl-gamma 97.3 0.00027 9.3E-09 63.6 6.3 98 3-131 17-115 (359)
400 1guz_A Malate dehydrogenase; o 97.3 0.0019 6.6E-08 56.9 11.6 115 3-128 1-118 (310)
401 3h8v_A Ubiquitin-like modifier 97.3 0.0029 9.9E-08 54.9 12.4 106 3-129 37-170 (292)
402 3oj0_A Glutr, glutamyl-tRNA re 97.3 7.7E-05 2.6E-09 57.9 2.3 71 2-89 21-91 (144)
403 2ewd_A Lactate dehydrogenase,; 97.3 0.002 6.7E-08 57.0 11.4 114 3-129 5-122 (317)
404 2ozp_A N-acetyl-gamma-glutamyl 97.3 0.00024 8.1E-09 63.6 5.4 98 2-131 4-102 (345)
405 3dr3_A N-acetyl-gamma-glutamyl 97.3 0.00056 1.9E-08 60.8 7.6 102 2-131 4-109 (337)
406 1jvb_A NAD(H)-dependent alcoho 97.3 0.00061 2.1E-08 61.1 7.6 75 2-88 171-250 (347)
407 2xxj_A L-LDH, L-lactate dehydr 97.2 0.0026 8.8E-08 56.0 11.3 114 3-129 1-117 (310)
408 1lld_A L-lactate dehydrogenase 97.2 0.0036 1.2E-07 55.3 12.1 117 1-129 6-124 (319)
409 1p9l_A Dihydrodipicolinate red 97.2 0.011 3.7E-07 50.0 14.4 157 3-188 1-194 (245)
410 1a5z_A L-lactate dehydrogenase 97.2 0.0028 9.7E-08 56.0 11.2 113 3-128 1-116 (319)
411 2egg_A AROE, shikimate 5-dehyd 97.2 0.00049 1.7E-08 60.3 6.1 75 2-90 141-216 (297)
412 1pjc_A Protein (L-alanine dehy 97.2 0.00042 1.4E-08 62.6 5.7 74 3-89 168-241 (361)
413 4f3y_A DHPR, dihydrodipicolina 97.2 0.00087 3E-08 57.7 7.4 97 2-130 7-105 (272)
414 2vns_A Metalloreductase steap3 97.1 0.00044 1.5E-08 57.6 5.1 65 2-87 28-92 (215)
415 1ys4_A Aspartate-semialdehyde 97.1 0.00048 1.6E-08 61.9 5.7 34 1-34 7-41 (354)
416 2d8a_A PH0655, probable L-thre 97.1 0.0008 2.7E-08 60.4 7.1 75 2-88 168-246 (348)
417 2c0c_A Zinc binding alcohol de 97.1 0.0014 4.9E-08 59.0 8.9 98 2-131 164-264 (362)
418 4a0s_A Octenoyl-COA reductase/ 97.1 0.00086 2.9E-08 62.4 7.5 38 2-39 221-258 (447)
419 2d4a_B Malate dehydrogenase; a 97.1 0.0034 1.2E-07 55.1 10.9 114 4-129 1-117 (308)
420 2ew2_A 2-dehydropantoate 2-red 97.1 0.00045 1.5E-08 60.9 5.1 39 1-40 2-40 (316)
421 1nvt_A Shikimate 5'-dehydrogen 97.1 0.00013 4.4E-09 63.7 1.5 78 2-90 128-205 (287)
422 3pwz_A Shikimate dehydrogenase 97.1 0.0022 7.7E-08 55.2 9.1 72 2-89 120-192 (272)
423 3gaz_A Alcohol dehydrogenase s 97.1 0.0015 5.2E-08 58.4 8.2 74 2-87 151-225 (343)
424 4ezb_A Uncharacterized conserv 97.0 0.00055 1.9E-08 60.6 5.1 35 1-36 23-58 (317)
425 3c24_A Putative oxidoreductase 97.0 0.00057 2E-08 59.5 4.9 39 1-39 10-48 (286)
426 1rjw_A ADH-HT, alcohol dehydro 97.0 0.0013 4.6E-08 58.6 7.4 73 2-88 165-240 (339)
427 1p9o_A Phosphopantothenoylcyst 97.0 0.0015 5E-08 57.2 7.2 36 2-37 36-90 (313)
428 4e12_A Diketoreductase; oxidor 97.0 0.00074 2.5E-08 58.7 5.4 42 3-45 5-46 (283)
429 2ph5_A Homospermidine synthase 97.0 0.003 1E-07 58.3 9.4 95 2-130 13-114 (480)
430 1iz0_A Quinone oxidoreductase; 97.0 0.00098 3.4E-08 58.5 6.0 73 2-88 126-198 (302)
431 3fbg_A Putative arginate lyase 97.0 0.0025 8.7E-08 57.0 8.7 75 2-88 151-227 (346)
432 1e3j_A NADP(H)-dependent ketos 97.0 0.0052 1.8E-07 55.1 10.8 77 2-88 169-250 (352)
433 2pv7_A T-protein [includes: ch 96.9 0.0016 5.6E-08 57.0 7.1 36 1-36 20-55 (298)
434 1vpd_A Tartronate semialdehyde 96.9 0.00071 2.4E-08 59.2 4.7 67 1-87 4-70 (299)
435 3qy9_A DHPR, dihydrodipicolina 96.9 0.012 4.1E-07 49.7 11.7 34 2-36 3-37 (243)
436 3gt0_A Pyrroline-5-carboxylate 96.9 0.00071 2.4E-08 57.5 4.2 67 1-86 1-71 (247)
437 2r00_A Aspartate-semialdehyde 96.9 0.00054 1.9E-08 61.0 3.5 94 2-131 3-99 (336)
438 7mdh_A Protein (malate dehydro 96.9 0.015 5.1E-07 52.2 12.8 119 3-129 33-159 (375)
439 3obb_A Probable 3-hydroxyisobu 96.9 0.011 3.9E-07 51.6 11.9 102 2-125 3-119 (300)
440 1yqd_A Sinapyl alcohol dehydro 96.9 0.002 6.8E-08 58.2 7.2 74 2-88 188-261 (366)
441 2vhw_A Alanine dehydrogenase; 96.8 0.0012 4E-08 59.9 5.6 75 2-89 168-242 (377)
442 3m6i_A L-arabinitol 4-dehydrog 96.8 0.0054 1.9E-07 55.2 10.0 78 2-88 180-262 (363)
443 4huj_A Uncharacterized protein 96.8 0.00068 2.3E-08 56.6 3.7 41 2-43 23-64 (220)
444 1p77_A Shikimate 5-dehydrogena 96.8 0.00049 1.7E-08 59.5 2.8 74 2-90 119-192 (272)
445 1mv8_A GMD, GDP-mannose 6-dehy 96.8 0.0022 7.4E-08 59.4 7.2 37 3-40 1-37 (436)
446 2vn8_A Reticulon-4-interacting 96.8 0.0032 1.1E-07 57.0 8.2 75 2-88 184-258 (375)
447 2cdc_A Glucose dehydrogenase g 96.8 0.0024 8.2E-08 57.6 7.2 71 2-88 181-256 (366)
448 3h5n_A MCCB protein; ubiquitin 96.7 0.009 3.1E-07 53.5 10.4 105 2-130 118-243 (353)
449 1xa0_A Putative NADPH dependen 96.7 0.002 6.9E-08 57.2 6.0 74 4-88 152-226 (328)
450 3rui_A Ubiquitin-like modifier 96.7 0.02 6.9E-07 50.6 12.2 101 2-127 34-170 (340)
451 2o7s_A DHQ-SDH PR, bifunctiona 96.7 0.001 3.5E-08 63.1 4.1 70 3-89 365-435 (523)
452 1y81_A Conserved hypothetical 96.7 0.0046 1.6E-07 47.4 7.1 85 3-129 15-102 (138)
453 1y8q_A Ubiquitin-like 1 activa 96.7 0.0089 3.1E-07 53.4 10.0 109 2-135 36-164 (346)
454 4dvj_A Putative zinc-dependent 96.7 0.0055 1.9E-07 55.2 8.7 74 3-88 173-249 (363)
455 2h78_A Hibadh, 3-hydroxyisobut 96.7 0.0019 6.4E-08 56.7 5.4 65 2-86 3-67 (302)
456 4gbj_A 6-phosphogluconate dehy 96.7 0.003 1E-07 55.2 6.5 39 1-40 4-42 (297)
457 3krt_A Crotonyl COA reductase; 96.6 0.0051 1.8E-07 57.2 8.3 38 2-39 229-266 (456)
458 1obb_A Maltase, alpha-glucosid 96.6 0.027 9.2E-07 52.4 13.0 121 2-129 3-152 (480)
459 4dpl_A Malonyl-COA/succinyl-CO 96.6 0.0047 1.6E-07 55.4 7.6 31 3-33 8-39 (359)
460 4dpk_A Malonyl-COA/succinyl-CO 96.6 0.0047 1.6E-07 55.4 7.6 31 3-33 8-39 (359)
461 2ep5_A 350AA long hypothetical 96.6 0.0015 5.1E-08 58.6 4.3 32 2-33 4-36 (350)
462 3pdu_A 3-hydroxyisobutyrate de 96.6 0.0018 6.3E-08 56.3 4.8 66 2-87 1-66 (287)
463 1u8x_X Maltose-6'-phosphate gl 96.6 0.0051 1.8E-07 57.2 7.9 120 3-129 29-172 (472)
464 3pid_A UDP-glucose 6-dehydroge 96.6 0.0095 3.3E-07 54.7 9.4 38 2-41 36-73 (432)
465 1s6y_A 6-phospho-beta-glucosid 96.6 0.0064 2.2E-07 56.3 8.4 121 2-129 7-153 (450)
466 3l6d_A Putative oxidoreductase 96.6 0.0018 6.2E-08 56.9 4.5 66 2-87 9-74 (306)
467 2dwc_A PH0318, 433AA long hypo 96.5 0.0079 2.7E-07 55.5 9.0 73 2-87 19-91 (433)
468 3g0o_A 3-hydroxyisobutyrate de 96.5 0.0013 4.4E-08 57.8 3.4 39 2-41 7-45 (303)
469 3qha_A Putative oxidoreductase 96.5 0.0023 7.8E-08 56.0 4.9 40 2-42 15-54 (296)
470 4e4t_A Phosphoribosylaminoimid 96.5 0.0077 2.6E-07 55.4 8.6 68 2-84 35-102 (419)
471 4dll_A 2-hydroxy-3-oxopropiona 96.5 0.0035 1.2E-07 55.5 6.1 66 2-87 31-96 (320)
472 3doj_A AT3G25530, dehydrogenas 96.5 0.0038 1.3E-07 54.9 6.3 65 2-86 21-85 (310)
473 1gpj_A Glutamyl-tRNA reductase 96.5 0.0039 1.3E-07 57.0 6.6 70 2-88 167-237 (404)
474 1t4b_A Aspartate-semialdehyde 96.5 0.013 4.4E-07 52.7 9.6 95 2-130 1-100 (367)
475 3o8q_A Shikimate 5-dehydrogena 96.5 0.0078 2.7E-07 52.0 7.9 72 2-89 126-198 (281)
476 3phh_A Shikimate dehydrogenase 96.5 0.011 3.9E-07 50.5 8.8 67 2-90 118-184 (269)
477 3orq_A N5-carboxyaminoimidazol 96.5 0.0061 2.1E-07 55.2 7.6 68 2-84 12-79 (377)
478 3e5r_O PP38, glyceraldehyde-3- 96.5 0.015 5.3E-07 51.5 9.9 33 1-34 1-35 (337)
479 3uog_A Alcohol dehydrogenase; 96.5 0.0084 2.9E-07 54.0 8.4 76 2-87 190-266 (363)
480 3pef_A 6-phosphogluconate dehy 96.5 0.003 1E-07 54.9 5.2 66 2-87 1-66 (287)
481 3ijp_A DHPR, dihydrodipicolina 96.4 0.0086 2.9E-07 51.7 7.8 97 2-129 21-119 (288)
482 1cdo_A Alcohol dehydrogenase; 96.4 0.011 3.6E-07 53.5 8.9 74 2-88 193-272 (374)
483 3vtf_A UDP-glucose 6-dehydroge 96.4 0.025 8.7E-07 51.9 11.4 38 2-40 21-58 (444)
484 3don_A Shikimate dehydrogenase 96.4 0.0011 3.6E-08 57.4 2.1 69 2-89 117-186 (277)
485 4g65_A TRK system potassium up 96.4 0.02 6.9E-07 53.2 10.8 103 3-133 236-338 (461)
486 2ahr_A Putative pyrroline carb 96.4 0.0039 1.3E-07 53.2 5.6 67 2-87 3-69 (259)
487 3ggo_A Prephenate dehydrogenas 96.4 0.02 6.9E-07 50.4 10.2 38 1-39 32-71 (314)
488 1uuf_A YAHK, zinc-type alcohol 96.4 0.0077 2.6E-07 54.4 7.7 73 2-88 195-267 (369)
489 2d59_A Hypothetical protein PH 96.4 0.0086 2.9E-07 46.2 6.9 31 3-33 23-56 (144)
490 1bg6_A N-(1-D-carboxylethyl)-L 96.3 0.0073 2.5E-07 54.1 7.2 37 3-40 5-41 (359)
491 3dtt_A NADP oxidoreductase; st 96.3 0.0028 9.7E-08 53.7 4.2 36 2-38 19-54 (245)
492 1kjq_A GART 2, phosphoribosylg 96.3 0.0081 2.8E-07 54.5 7.5 72 2-86 11-82 (391)
493 2w70_A Biotin carboxylase; lig 96.3 0.0048 1.7E-07 57.2 6.0 76 1-87 1-83 (449)
494 3ip1_A Alcohol dehydrogenase, 96.3 0.01 3.5E-07 54.3 8.0 75 2-88 214-292 (404)
495 4dio_A NAD(P) transhydrogenase 96.3 0.015 5.3E-07 52.6 8.9 74 3-89 191-286 (405)
496 1y8q_B Anthracycline-, ubiquit 96.3 0.023 7.7E-07 54.6 10.4 109 3-134 18-146 (640)
497 2i6t_A Ubiquitin-conjugating e 96.3 0.021 7.2E-07 49.9 9.5 110 2-129 14-126 (303)
498 3b1j_A Glyceraldehyde 3-phosph 96.3 0.02 6.9E-07 50.8 9.4 32 1-33 1-35 (339)
499 2h6e_A ADH-4, D-arabinose 1-de 96.3 0.0048 1.6E-07 55.1 5.5 75 2-88 171-248 (344)
500 3p2y_A Alanine dehydrogenase/p 96.3 0.0076 2.6E-07 54.2 6.7 73 3-88 185-275 (381)
No 1
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=100.00 E-value=4.9e-54 Score=391.40 Aligned_cols=335 Identities=54% Similarity=0.925 Sum_probs=288.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++++++|+++|++|++++|+........+.+.... +.++.++.+|++|.+++.++++..++|+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT---GKTPAFHETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH---SCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc---CCCceEEEeecCCHHHHHHHHhccCCcE
Confidence 4799999999999999999999999999999998776655554444332 3578899999999999999998657999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
|||+||........+.+...+++|+.++.+++++|++.++++||++||..+||.....+++|+.+..+.++|+.+|.++|
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAE 161 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHH
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHH
Confidence 99999976544455667788999999999999999999989999999999999888888999999999999999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCC-CCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
.+++.++.+.++++++++||+++|||++.+. +....+....+.+++.+...++...+.++|..++++++++.++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 241 (341)
T 3enk_A 162 QILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVV 241 (341)
T ss_dssp HHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred HHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHH
Confidence 9999998887569999999999999976554 444444456678888777777767788888777777899999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCcccc
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKY 320 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 320 (347)
|+|++++.+++... +...+++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|+++.|||+|++
T Consensus 242 Dva~a~~~~~~~~~-~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 320 (341)
T 3enk_A 242 DLARGHIAALDALE-RRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGWKAER 320 (341)
T ss_dssp HHHHHHHHHHHHHH-HHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHHHCCCCCC
T ss_pred HHHHHHHHHHHhhh-cCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHHHcCCCCCC
Confidence 99999999987621 12456999999999999999999999999998887777767777778889999999999999999
Q ss_pred cHHHHHHHHHHHHhhCCCCC
Q 040584 321 GIDEMCRDQWNWASKNPYGY 340 (347)
Q Consensus 321 ~~~~~i~~~~~~~~~~~~~~ 340 (347)
+++++|+++++||++++..|
T Consensus 321 ~l~~~l~~~~~~~~~~~~~~ 340 (341)
T 3enk_A 321 DLERMCADHWRWQENNPRGF 340 (341)
T ss_dssp CHHHHHHHHHHHHHHSTTSC
T ss_pred CHHHHHHHHHHHHHhcCccC
Confidence 99999999999999997654
No 2
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=100.00 E-value=1.2e-51 Score=376.71 Aligned_cols=339 Identities=61% Similarity=1.029 Sum_probs=273.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch------hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA------SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
|+|+||||||+||||++|+++|+++|++|++++|.... .....+.+.... ..++.++.+|++|.+++.+++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~ 77 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT---GRSVEFEEMDILDQGALQRLF 77 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH---TCCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc---CCceEEEECCCCCHHHHHHHH
Confidence 88999999999999999999999999999999886543 222233333221 347889999999999999999
Q ss_pred ccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCC-CCch
Q 040584 75 AGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA-MNPY 153 (347)
Q Consensus 75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~-~~~Y 153 (347)
+..++|+|||+||........+++...+++|+.++.+++++|++.++++||++||..+||.....+++|+.+..| .+.|
T Consensus 78 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y 157 (348)
T 1ek6_A 78 KKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY 157 (348)
T ss_dssp HHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred HhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCch
Confidence 855699999999975433344567789999999999999999998889999999999999877788999988777 8999
Q ss_pred hhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCC-CCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCce
Q 040584 154 GRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTV 232 (347)
Q Consensus 154 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 232 (347)
+.+|.++|.+++.++.+..+++++++||+++|||++++. +....+....+.+.+.+...+....+.++|...+++++++
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 237 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCce
Confidence 999999999999988762359999999999999976444 3333222345666665555555556777775555557889
Q ss_pred eeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHH
Q 040584 233 VRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAER 312 (347)
Q Consensus 233 ~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~ 312 (347)
.++|+|++|+|++++.+++.... ...+++||+++++++|+.|+++.+++.+|.+.++...+..+.......+|++|+++
T Consensus 238 ~~~~i~v~Dva~a~~~~~~~~~~-~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~ 316 (348)
T 1ek6_A 238 VRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQE 316 (348)
T ss_dssp EECEEEHHHHHHHHHHHHHHHTT-TCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHH
T ss_pred EEeeEEHHHHHHHHHHHHhcccc-cCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCccchhhccCHHHHHH
Confidence 99999999999999999987311 12348999999999999999999999999887765555555555667899999999
Q ss_pred hcCCcccccHHHHHHHHHHHHhhCCCCCCCC
Q 040584 313 ELNWKAKYGIDEMCRDQWNWASKNPYGYESP 343 (347)
Q Consensus 313 ~lg~~p~~~~~~~i~~~~~~~~~~~~~~~~~ 343 (347)
.|||+|+++++++|+++++||++++..+..+
T Consensus 317 ~lG~~p~~~l~~~l~~~~~w~~~~~~~~~~~ 347 (348)
T 1ek6_A 317 ELGWTAALGLDRMCEDLWRWQKQNPSGFGTQ 347 (348)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHCTTCSCC-
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhcccccccc
Confidence 9999999999999999999999987766653
No 3
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=100.00 E-value=5.9e-51 Score=369.40 Aligned_cols=328 Identities=42% Similarity=0.708 Sum_probs=269.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+||||||+||||++|+++|+++|++|++++|....... .+ ..+++++.+|+.|.+++.++++..++|+
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~----~~~~~~~~~D~~~~~~~~~~~~~~~~d~ 70 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------AI----TEGAKFYNGDLRDKAFLRDVFTQENIEA 70 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------GS----CTTSEEEECCTTCHHHHHHHHHHSCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------hc----CCCcEEEECCCCCHHHHHHHHhhcCCCE
Confidence 4789999999999999999999999999999987654321 11 2367899999999999999997546999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
|||+||......+.+++...+++|+.++.+++++|++.++++||++||..+||.....+++|+++..|.+.|+.+|.++|
T Consensus 71 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e 150 (330)
T 2c20_A 71 VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIE 150 (330)
T ss_dssp EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHH
T ss_pred EEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHH
Confidence 99999975433344567788999999999999999999999999999999999877788999999889999999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCC-CCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
.+++.++.+. +++++++||+++|||.+.+. |.. ......+.+.+.+...+..+.+.++|...+++++++.++|+|++
T Consensus 151 ~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~ 228 (330)
T 2c20_A 151 KMLHWYSQAS-NLRYKIFRYFNVAGATPNGIIGED-HRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228 (330)
T ss_dssp HHHHHHHHTS-SCEEEEEECSEEECCCTTCSSCCC-CSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHH
T ss_pred HHHHHHHHHh-CCcEEEEecCcccCCCCcCccccc-cccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHH
Confidence 9999998775 89999999999999975443 222 11223466666555555555677777555555788999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCcccc
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKY 320 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 320 (347)
|+|+++..++++... ...+++||+++++++|+.|+++.+++.+|.+.++...+..+.......+|++|+++.|||+|++
T Consensus 229 Dva~a~~~~~~~~~~-~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 307 (330)
T 2c20_A 229 DLVAAHFLGLKDLQN-GGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRY 307 (330)
T ss_dssp HHHHHHHHHHHHHHT-TCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCSC
T ss_pred HHHHHHHHHHhcccc-CCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCCcccccccCHHHHHHHhCCCCcc
Confidence 999999999986321 1235899999999999999999999999988776555555555567789999999999999999
Q ss_pred -cHHHHHHHHHHHHhhCCCCCCC
Q 040584 321 -GIDEMCRDQWNWASKNPYGYES 342 (347)
Q Consensus 321 -~~~~~i~~~~~~~~~~~~~~~~ 342 (347)
+++++|+++++||++++..|.+
T Consensus 308 ~~l~~~l~~~~~~~~~~~~~~~~ 330 (330)
T 2c20_A 308 VNVKTIIEHAWNWHQKQPNGYEK 330 (330)
T ss_dssp CCHHHHHHHHHHHHHHCSSCCCC
T ss_pred CCHHHHHHHHHHHHHHhhhccCC
Confidence 9999999999999999877654
No 4
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=100.00 E-value=1.4e-50 Score=368.12 Aligned_cols=335 Identities=53% Similarity=0.939 Sum_probs=268.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+||||||+||||++++++|+++|++|++++|.........+.+.... +.++.++.+|++|.+++.+++++.++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~D~v 77 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG---GKHPTFVEGDIRNEALMTEILHDHAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH---TSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc---CCcceEEEccCCCHHHHHHHhhccCCCEE
Confidence 589999999999999999999999999999875432222222222221 24678899999999999999975569999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCC-CCchhhhHHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA-MNPYGRSKLFIE 161 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~-~~~Y~~sK~~~e 161 (347)
||+||........+++...+++|+.++.+++++|++.++++||++||..+||.....+++|+.+..+ .++|+.+|.++|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 157 (338)
T 1udb_A 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVE 157 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHH
T ss_pred EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHH
Confidence 9999975433334556778999999999999999998889999999999999877778888887655 789999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCC-CCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
.+++.++.+..+++++++||+++|||++++. |..+......+.+.+.+...+....+.++|...+.+++++.++|||++
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 9999998775579999999999999977544 433333344566766666655555677777555556788999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCcccc
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKY 320 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 320 (347)
|+|++++.+++.... ...+++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|+++.|||+|++
T Consensus 238 Dva~a~~~~l~~~~~-~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 316 (338)
T 1udb_A 238 DLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR 316 (338)
T ss_dssp HHHHHHHHHHHHHTT-CCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCC
T ss_pred HHHHHHHHHHhhhhc-cCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCchhhhhcCHHHHHHHcCCCcCC
Confidence 999999999876211 1234799999999999999999999999988776555555555556778999999999999999
Q ss_pred cHHHHHHHHHHHHhhCCCCCC
Q 040584 321 GIDEMCRDQWNWASKNPYGYE 341 (347)
Q Consensus 321 ~~~~~i~~~~~~~~~~~~~~~ 341 (347)
+++++|+++++|++++...|.
T Consensus 317 ~l~~~l~~~~~w~~~~~~~~~ 337 (338)
T 1udb_A 317 TLDEMAQDTWHWQSRHPQGYP 337 (338)
T ss_dssp CHHHHHHHHHHHHHHCTTCSC
T ss_pred CHHHHHHHHHHHHHhcccccC
Confidence 999999999999999876553
No 5
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=100.00 E-value=5.3e-51 Score=372.85 Aligned_cols=318 Identities=25% Similarity=0.343 Sum_probs=262.5
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhcc-CCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGY-QGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|+|+|||||||||||++|+++|+++|++|++++|...........+...... ...+++++.+|+.|.+++.++++ ++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--CC
Confidence 3589999999999999999999999999999999877655444444332100 01578999999999999999998 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|+|||+||.........++...+++|+.++.+++++|++.++++|||+||..+||.....+++|+.+..|.+.|+.+|.+
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~ 181 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYV 181 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHH
Confidence 99999999765444556777899999999999999999999999999999999998888899999999999999999999
Q ss_pred HHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCCceeeeeee
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 238 (347)
+|.+++.++++. +++++++||+++|||.. ...+....+. .++.++..+.. +.++| ++++.++|+|
T Consensus 182 ~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~g------~g~~~~~~i~ 247 (351)
T 3ruf_A 182 NEIYAQVYARTY-GFKTIGLRYFNVFGRRQ-----DPNGAYAAVIPKWTAAMLKGDD--VYING------DGETSRDFCY 247 (351)
T ss_dssp HHHHHHHHHHHH-CCCCEEEEECSEESTTC-----CCCSTTCCHHHHHHHHHHHTCC--CEEES------SSCCEECCEE
T ss_pred HHHHHHHHHHHh-CCCEEEEeeCceeCcCC-----CCCcchhhHHHHHHHHHHcCCC--cEEeC------CCCeEEeeEE
Confidence 999999998876 89999999999999843 2222122343 46677777653 45556 6889999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC-----cccCCCCCCCchhhccChHHHHHh
Q 040584 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP-----LVKSGRRPGDAEIVYASTEKAERE 313 (347)
Q Consensus 239 v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~d~~k~~~~ 313 (347)
++|+|++++.++... +...+++||+++++++|+.|+++.+++.+|.+.. ....+..+.......+|++|+++.
T Consensus 248 v~Dva~a~~~~~~~~--~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 325 (351)
T 3ruf_A 248 IDNVIQMNILSALAK--DSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDL 325 (351)
T ss_dssp HHHHHHHHHHHHTCC--GGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHH
T ss_pred HHHHHHHHHHHHhhc--cccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHH
Confidence 999999999988761 2356799999999999999999999999998432 222334445566788999999999
Q ss_pred cCCcccccHHHHHHHHHHHHhhC
Q 040584 314 LNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 314 lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
|||+|+++++++|+++++||+++
T Consensus 326 lG~~p~~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 326 LKYRPNIKIREGLRLSMPWYVRF 348 (351)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876
No 6
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=100.00 E-value=3.5e-50 Score=361.44 Aligned_cols=303 Identities=21% Similarity=0.259 Sum_probs=252.9
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+|||||||||||++|+++|+++|++|++++|++.... . .+++++.+|+. .+++.++++ ++|
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~-----------~~~~~~~~Dl~-~~~~~~~~~--~~d 64 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I-----------NDYEYRVSDYT-LEDLINQLN--DVD 64 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------------CCEEEECCCC-HHHHHHHTT--TCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C-----------CceEEEEcccc-HHHHHHhhc--CCC
Confidence 8999999999999999999999999999999999843321 1 16789999999 999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+|+..... ++...+++|+.++.+++++|++.+++||||+||..+||.....+++|+++..|.+.|+.+|.++
T Consensus 65 ~Vih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 140 (311)
T 3m2p_A 65 AVVHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLAC 140 (311)
T ss_dssp EEEECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHH
T ss_pred EEEEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHH
Confidence 999999976543 6678899999999999999999999999999999999988888899999999999999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
|++++.++.+. +++++++||+++|||.. ... ..+..++..+..+. .+.++| ++++.++|+|++
T Consensus 141 E~~~~~~~~~~-g~~~~ilRp~~v~G~~~-----~~~---~~~~~~~~~~~~~~--~~~~~g------~~~~~~~~v~v~ 203 (311)
T 3m2p_A 141 EHIGNIYSRKK-GLCIKNLRFAHLYGFNE-----KNN---YMINRFFRQAFHGE--QLTLHA------NSVAKREFLYAK 203 (311)
T ss_dssp HHHHHHHHHHS-CCEEEEEEECEEECSCC-------C---CHHHHHHHHHHTCC--CEEESS------BCCCCEEEEEHH
T ss_pred HHHHHHHHHHc-CCCEEEEeeCceeCcCC-----CCC---CHHHHHHHHHHcCC--CeEEec------CCCeEEceEEHH
Confidence 99999998875 99999999999999842 111 22344666666665 455556 688999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCC-CCCCchhhccChHHHHHhcCCccc
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR-RPGDAEIVYASTEKAERELNWKAK 319 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lg~~p~ 319 (347)
|+|+++..++++ + ..+++||+++++.+|+.|+++.+++.+|.+.++...+. .........+|++|+++.|||+|+
T Consensus 204 Dva~a~~~~~~~---~-~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 279 (311)
T 3m2p_A 204 DAAKSVIYALKQ---E-KVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTD 279 (311)
T ss_dssp HHHHHHHHHTTC---T-TCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCS
T ss_pred HHHHHHHHHHhc---C-CCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcc
Confidence 999999999886 2 26799999999999999999999999999877666555 556667788999999999999999
Q ss_pred ccHHHHHHHHHHHHhhCCCCCCCCC
Q 040584 320 YGIDEMCRDQWNWASKNPYGYESPN 344 (347)
Q Consensus 320 ~~~~~~i~~~~~~~~~~~~~~~~~~ 344 (347)
++++++|+++++|+++++.-+.++.
T Consensus 280 ~~~~~~l~~~~~~~~~~~~~~~~~~ 304 (311)
T 3m2p_A 280 YNFATAVEEIHLLMRGLDDVPLWYE 304 (311)
T ss_dssp CCHHHHHHHHHHHHCC---------
T ss_pred cCHHHHHHHHHHHHHhcccCcceec
Confidence 9999999999999998876655543
No 7
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=100.00 E-value=5.5e-49 Score=365.37 Aligned_cols=339 Identities=39% Similarity=0.658 Sum_probs=267.0
Q ss_pred CCceEEEEcCCCcccHHHHHHHH-hCCCeEEEEeCCCchh---------HHHHHHHHHhhccC-CCC---eEEEecCCCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLL-LGGYKTVVVDNLDNAS---------EIAVAKVKELAGYQ-GNN---MTFHKLDLRD 66 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~-~~g~~v~~~~r~~~~~---------~~~~~~~~~~~~~~-~~~---~~~~~~Dl~d 66 (347)
++|+||||||+||||++|+++|+ ++|++|++++|..... ....+.+..+.+.. ..+ +.++.+|++|
T Consensus 1 s~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 35799999999999999999999 9999999999876542 22222222221100 124 8899999999
Q ss_pred HHHHHHHHccCC-CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCC-------C
Q 040584 67 KAALEVVFAGTK-FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPK-------V 138 (347)
Q Consensus 67 ~~~~~~~~~~~~-~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~-------~ 138 (347)
.+.+.++++..+ +|+|||+||......+.+++...+++|+.++.+++++|++.++++||++||..+||... .
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 999999998555 99999999976433344567789999999999999999999999999999999998765 5
Q ss_pred CCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCC-CCCCCCCCCccHHHHH-----HHHc
Q 040584 139 VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVT-----QVAV 212 (347)
Q Consensus 139 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~-----~~~~ 212 (347)
.+++|+.+..|.+.|+.+|.++|.+++.++.++ +++++++||++||||.+.+. |... .....+.+.+. ++..
T Consensus 161 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilRp~~v~G~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFNACGAHEDGDIGEHY-QGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECCCTTSSCSCCS-TTCCSHHHHHHHHHHHHHSC
T ss_pred cCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH-CCcEEEEeccceeCCCccccccccc-cchhHHHHHHHHHHHHHHHh
Confidence 788999998889999999999999999998876 89999999999999975432 2211 11234555544 5555
Q ss_pred CCC----------CceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCC--CCC---eeEEccCCCcccHHHHH
Q 040584 213 GRR----------PALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPK--VGC---EVYNLGTGKGTSVLEMV 277 (347)
Q Consensus 213 ~~~----------~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~--~~~---~~~nv~~~~~~s~~e~~ 277 (347)
+.. ..+.++|...+++++++.++|||++|+|++++.+++...... ..+ ++||+++++++|+.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 318 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence 543 356777755555578899999999999999999998621110 013 89999999999999999
Q ss_pred HHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCcccc-cHHHHHHHHHHHHhhCCCCCC
Q 040584 278 AAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYE 341 (347)
Q Consensus 278 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~i~~~~~~~~~~~~~~~ 341 (347)
+.+.+.+|.+.++...+..+.......+|++|+++.|||+|++ +++++|+++++||++++..|.
T Consensus 319 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~~~~ 383 (397)
T 1gy8_A 319 EVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYA 383 (397)
T ss_dssp HHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTTC
T ss_pred HHHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhcccccC
Confidence 9999999988776555545555567789999999999999999 999999999999999876554
No 8
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=100.00 E-value=5.4e-50 Score=365.43 Aligned_cols=315 Identities=30% Similarity=0.453 Sum_probs=253.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
+|+|||||||||||++|+++|+++| ++|++++|...... ...+..+. ..+++.++.+|+.|.+.+.+++++.++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 99 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQ--DHPNYYFVKGEIQNGELLEHVIKERDV 99 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhc--cCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence 4799999999999999999999999 77888877653211 01111111 135889999999999999999985459
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCC-CCCCCCCCCCCCCCCchhhhHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWP-KVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~-~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
|+|||+||........+++...+++|+.++.+++++|++.++++|||+||..+||.. ...+++|+.+..|.+.|+.+|.
T Consensus 100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~ 179 (346)
T 4egb_A 100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKA 179 (346)
T ss_dssp CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHH
T ss_pred CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHH
Confidence 999999998765556677888999999999999999999999999999999999976 4678999999999999999999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 238 (347)
++|.+++.++.+. +++++++||+++|||.. ... ..+..++..+..+. .+.++| ++++.++|||
T Consensus 180 ~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~-----~~~---~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~ 242 (346)
T 4egb_A 180 SADMIALAYYKTY-QLPVIVTRCSNNYGPYQ-----YPE---KLIPLMVTNALEGK--KLPLYG------DGLNVRDWLH 242 (346)
T ss_dssp HHHHHHHHHHHHH-CCCEEEEEECEEESTTC-----CTT---SHHHHHHHHHHTTC--CCEEET------TSCCEECEEE
T ss_pred HHHHHHHHHHHHh-CCCEEEEeecceeCcCC-----Ccc---chHHHHHHHHHcCC--CceeeC------CCCeEEeeEE
Confidence 9999999998876 89999999999999842 111 22334666677665 345556 7889999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC-cccCCCCCCCchhhccChHHHHHhcCCc
Q 040584 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP-LVKSGRRPGDAEIVYASTEKAERELNWK 317 (347)
Q Consensus 239 v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~d~~k~~~~lg~~ 317 (347)
++|+|+++..+++. + ..+++||+++++++|+.|+++.+++.+|.+.+ +...+..+.......+|++|+++.|||+
T Consensus 243 v~Dva~a~~~~~~~---~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 318 (346)
T 4egb_A 243 VTDHCSAIDVVLHK---G-RVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWE 318 (346)
T ss_dssp HHHHHHHHHHHHHH---C-CTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhc---C-CCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCC
Confidence 99999999999998 2 36689999999999999999999999998765 4444444555566779999999999999
Q ss_pred ccccHHHHHHHHHHHHhhCCCCCC
Q 040584 318 AKYGIDEMCRDQWNWASKNPYGYE 341 (347)
Q Consensus 318 p~~~~~~~i~~~~~~~~~~~~~~~ 341 (347)
|+++++++|+++++||++++..++
T Consensus 319 p~~~~~e~l~~~~~~~~~~~~~~~ 342 (346)
T 4egb_A 319 PKYTFEQGLQETVQWYEKNEEWWK 342 (346)
T ss_dssp CCCCHHHHHHHHHHHHHHCHHHHG
T ss_pred CCCCHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999865443
No 9
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=100.00 E-value=1.1e-49 Score=358.31 Aligned_cols=305 Identities=28% Similarity=0.425 Sum_probs=252.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+|||||||||||++|+++|+++|++|++++|........ ...+++++.+|+.|.+ +.++++ + |+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~~Dl~d~~-~~~~~~--~-d~v 66 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF----------VNPSAELHVRDLKDYS-WGAGIK--G-DVV 66 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG----------SCTTSEEECCCTTSTT-TTTTCC--C-SEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh----------cCCCceEEECccccHH-HHhhcC--C-CEE
Confidence 6899999999999999999999999999999876643211 1357889999999998 887777 4 999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEE 162 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 162 (347)
||+|+........+++...+++|+.++.+++++|++.++++|||+||..+||.....+++|+.+..|.+.|+.+|.++|.
T Consensus 67 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~ 146 (312)
T 3ko8_A 67 FHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEV 146 (312)
T ss_dssp EECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Confidence 99999765555667788899999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHH
Q 040584 163 ICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDL 242 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~ 242 (347)
+++.++.+. +++++++||+++|||... ...+..++.++..+. ..+.++| ++++.++++|++|+
T Consensus 147 ~~~~~~~~~-g~~~~~lrp~~v~g~~~~---------~~~~~~~~~~~~~~~-~~~~~~~------~g~~~~~~i~v~Dv 209 (312)
T 3ko8_A 147 MCATYARLF-GVRCLAVRYANVVGPRLR---------HGVIYDFIMKLRRNP-NVLEVLG------DGTQRKSYLYVRDA 209 (312)
T ss_dssp HHHHHHHHH-CCEEEEEEECEEECTTCC---------SSHHHHHHHHHHHCT-TEEEEC----------CEECEEEHHHH
T ss_pred HHHHHHHHh-CCCEEEEeeccccCcCCC---------CChHHHHHHHHHhCC-CCeEEcC------CCCeEEeeEEHHHH
Confidence 999998876 999999999999998421 122445666666553 2455556 78899999999999
Q ss_pred HHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCC------CCCCchhhccChHHHHHhcCC
Q 040584 243 ADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR------RPGDAEIVYASTEKAERELNW 316 (347)
Q Consensus 243 a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~k~~~~lg~ 316 (347)
|++++.++++...+...+++||+++++++|+.|+++.+.+.+|.+.++...+. .+.......+|++|+++.|||
T Consensus 210 a~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 289 (312)
T 3ko8_A 210 VEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGW 289 (312)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCC
T ss_pred HHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCC
Confidence 99999999862222356799999999999999999999999998876555332 233445678999999999999
Q ss_pred cccccHHHHHHHHHHHHhhCCC
Q 040584 317 KAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 317 ~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
+|+++++++|+++++|++++.|
T Consensus 290 ~p~~~~~~~l~~~~~~~~~~~~ 311 (312)
T 3ko8_A 290 RPTMTSAEAVKKTAEDLAKELW 311 (312)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhhhc
Confidence 9999999999999999998765
No 10
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.7e-49 Score=364.35 Aligned_cols=314 Identities=19% Similarity=0.301 Sum_probs=251.8
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLR-DKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~ 78 (347)
|||+|||||||||||++|+++|+++ ||+|++++|+........ ...+++++.+|++ |.+.+.++++ +
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---------~~~~v~~~~~Dl~~d~~~~~~~~~--~ 91 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV---------KHERMHFFEGDITINKEWVEYHVK--K 91 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG---------GSTTEEEEECCTTTCHHHHHHHHH--H
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc---------cCCCeEEEeCccCCCHHHHHHHhc--c
Confidence 3589999999999999999999998 999999999876543211 1358999999999 9999999998 6
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCC-------CCCC
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPL-------QAMN 151 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~-------~~~~ 151 (347)
+|+|||+||.........++...+++|+.++.+++++|++.+ +||||+||..+||.....+++|+.+. .|.+
T Consensus 92 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~ 170 (372)
T 3slg_A 92 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRW 170 (372)
T ss_dssp CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTH
T ss_pred CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCC
Confidence 999999999766544556777899999999999999999998 89999999999998877788877654 5677
Q ss_pred chhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCc
Q 040584 152 PYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGT 231 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 231 (347)
.|+.+|.++|.+++.++.+ +++++++||+++|||...+...........+..++.++..+. .+.++| +++
T Consensus 171 ~Y~~sK~~~E~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~ 240 (372)
T 3slg_A 171 IYACSKQLMDRVIWGYGME--GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGE--NISLVD------GGS 240 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTC--CEEEGG------GGC
T ss_pred cHHHHHHHHHHHHHHHHHC--CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCC--CcEEeC------CCc
Confidence 9999999999999999876 899999999999999643321111111122334667777765 455566 678
Q ss_pred eeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccC-CCcccHHHHHHHHHHHhCCCCCcccCCCC--------------
Q 040584 232 VVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGT-GKGTSVLEMVAAFEKASGKKIPLVKSGRR-------------- 296 (347)
Q Consensus 232 ~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------- 296 (347)
+.++|+|++|+|++++.++++.. ....+++||+++ ++.+|+.|+++.+++.+|.+.++...+..
T Consensus 241 ~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (372)
T 3slg_A 241 QKRAFTYVDDGISALMKIIENSN-GVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGN 319 (372)
T ss_dssp CEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC--------
T ss_pred eEEEEEEHHHHHHHHHHHHhccc-CcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccC
Confidence 99999999999999999998722 114679999999 48999999999999999977654322100
Q ss_pred -CCCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 297 -PGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 297 -~~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
........+|++|+++.|||+|+++++++|+++++||+++.
T Consensus 320 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 361 (372)
T 3slg_A 320 GYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHV 361 (372)
T ss_dssp -----CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCH
T ss_pred CccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 02344567899999999999999999999999999998763
No 11
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=100.00 E-value=1e-48 Score=352.20 Aligned_cols=305 Identities=25% Similarity=0.385 Sum_probs=245.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+||||||+||||++|+++|+++|+.|.+..|+...... ...++.++.+|++| +++.++++ ++|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-----------~~~~~~~~~~Dl~~-~~~~~~~~--~~d~ 66 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-----------VNEAARLVKADLAA-DDIKDYLK--GAEE 66 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-----------SCTTEEEECCCTTT-SCCHHHHT--TCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-----------cCCCcEEEECcCCh-HHHHHHhc--CCCE
Confidence 4789999999999999999999999555444443332211 13478899999999 88999998 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
|||+|+......+.+++...+++|+.++.+++++|++.++++||++||..+||.....+++|+.+..|.+.|+.+|.++|
T Consensus 67 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e 146 (313)
T 3ehe_A 67 VWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACE 146 (313)
T ss_dssp EEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred EEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999976555566778889999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
.+++.++.+. +++++++||+++|||... ...+..++.++..+. ..+.++| ++++.++|+|++|
T Consensus 147 ~~~~~~~~~~-g~~~~ilRp~~v~G~~~~---------~~~~~~~~~~~~~~~-~~~~~~~------~g~~~~~~i~v~D 209 (313)
T 3ehe_A 147 ALIESYCHTF-DMQAWIYRFANVIGRRST---------HGVIYDFIMKLKRNP-EELEILG------NGEQNKSYIYISD 209 (313)
T ss_dssp HHHHHHHHHT-TCEEEEEECSCEESTTCC---------CSHHHHHHHHHHHCT-TEEEEST------TSCCEECCEEHHH
T ss_pred HHHHHHHHhc-CCCEEEEeeccccCcCCC---------cChHHHHHHHHHcCC-CceEEeC------CCCeEEeEEEHHH
Confidence 9999998886 999999999999998421 122444666666553 2455666 7889999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCC---CCCCchhhccChHHHHHhcCCcc
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR---RPGDAEIVYASTEKAERELNWKA 318 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~d~~k~~~~lg~~p 318 (347)
+|++++.+++. ...+++||+++++++|+.|+++.+++.+|.++.+...+. .........+|++|++ .|||+|
T Consensus 210 va~a~~~~~~~----~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p 284 (313)
T 3ehe_A 210 CVDAMLFGLRG----DERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLK-RLGWKP 284 (313)
T ss_dssp HHHHHHHHTTC----CSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHH-HHTCCC
T ss_pred HHHHHHHHhcc----CCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHH-HcCCCC
Confidence 99999998873 356699999999999999999999999998876554332 2233455778999995 589999
Q ss_pred cccHHHHHHHHHHHHhhCCCCCCC
Q 040584 319 KYGIDEMCRDQWNWASKNPYGYES 342 (347)
Q Consensus 319 ~~~~~~~i~~~~~~~~~~~~~~~~ 342 (347)
+++++++|+++++||++++....+
T Consensus 285 ~~~~~e~l~~~~~~~~~~~~~~~~ 308 (313)
T 3ehe_A 285 RYNSEEAVRMAVRDLVEDLDEEGH 308 (313)
T ss_dssp SCCHHHHHHHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHHHHhCcccccc
Confidence 999999999999999998655444
No 12
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=100.00 E-value=8.7e-48 Score=351.73 Aligned_cols=317 Identities=24% Similarity=0.345 Sum_probs=253.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhcc-CCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGY-QGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+|||||||||||++|+++|+++|++|++++|+........+.+...... ...++.++.+|+.|.+++.++++ ++|
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d 104 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVD 104 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--CCC
Confidence 579999999999999999999999999999999765322222222111100 02478899999999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+||........+++...+++|+.++.+++++|++.++++||++||..+||.....+++|+.+..|.+.|+.+|.++
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 184 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN 184 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence 99999997543334456778899999999999999999999999999999999987777889999988999999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
|.+++.++.+. +++++++||+++|||... .......+. .++..+..+.. +.++| ++++.++|+|+
T Consensus 185 e~~~~~~~~~~-g~~~~ilRp~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~g------~g~~~~~~i~v 250 (352)
T 1sb8_A 185 ELYADVFSRCY-GFSTIGLRYFNVFGRRQD-----PNGAYAAVIPKWTSSMIQGDD--VYING------DGETSRDFCYI 250 (352)
T ss_dssp HHHHHHHHHHH-CCCCEEEEECCEECTTCC-----CCSTTCCHHHHHHHHHHHTCC--CEEES------SSCCEECCEEH
T ss_pred HHHHHHHHHHc-CCCEEEEEECceeCcCCC-----CCcchhhHHHHHHHHHHCCCC--cEEeC------CCCceEeeEEH
Confidence 99999988775 899999999999998421 111111233 35666666653 34455 67889999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHh---CCCCCc--ccCCCCCCCchhhccChHHHHHhc
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKAS---GKKIPL--VKSGRRPGDAEIVYASTEKAEREL 314 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~---g~~~~~--~~~~~~~~~~~~~~~d~~k~~~~l 314 (347)
+|+|++++.++... +...+++||+++++++|+.|+++.+.+.+ |.+.+. ...+..+.......+|++|+++.|
T Consensus 251 ~Dva~a~~~~~~~~--~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 328 (352)
T 1sb8_A 251 ENTVQANLLAATAG--LDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLL 328 (352)
T ss_dssp HHHHHHHHHHHTCC--GGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHT
T ss_pred HHHHHHHHHHHhcc--ccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHh
Confidence 99999999888751 12456999999999999999999999999 877652 223333444456778999999999
Q ss_pred CCcccccHHHHHHHHHHHHhhC
Q 040584 315 NWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 315 g~~p~~~~~~~i~~~~~~~~~~ 336 (347)
||+|+++++++|+++++||+++
T Consensus 329 G~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 329 GYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999865
No 13
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.1e-48 Score=347.23 Aligned_cols=301 Identities=21% Similarity=0.218 Sum_probs=246.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+|||||||||||++|+++|+++|+ +.... ...++.+.+|+.|.+.+.+++++.++|
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~---------------~~~~~~~~~D~~d~~~~~~~~~~~~~d 63 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPGED---------------WVFVSSKDADLTDTAQTRALFEKVQPT 63 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE---------------EEECCTTTCCTTSHHHHHHHHHHSCCS
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc---------------ccccCceecccCCHHHHHHHHhhcCCC
Confidence 468999999999999999999999998 11111 113344578999999999999866699
Q ss_pred EEEEccccccC-CccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCC----CCCCCC-chh
Q 040584 81 AVIHFAGLKAV-GESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEF----PLQAMN-PYG 154 (347)
Q Consensus 81 ~vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~----~~~~~~-~Y~ 154 (347)
+|||+|+.... ....+++...+++|+.++.+++++|++.++++|||+||..+||.....+++|+. +..|.+ +|+
T Consensus 64 ~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 143 (319)
T 4b8w_A 64 HVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYS 143 (319)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHH
T ss_pred EEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHH
Confidence 99999997542 234566778899999999999999999999999999999999988888899986 555655 599
Q ss_pred hhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHH----HHcCCCCceEEecccCCCCC
Q 040584 155 RSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQ----VAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 155 ~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~g~~~~~~~ 229 (347)
.+|.++|.+++.++++. +++++++||+++|||..... .....+.+ ++.+ +..+. .+.++| +
T Consensus 144 ~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~Gp~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~ 209 (319)
T 4b8w_A 144 YAKRMIDVQNRAYFQQY-GCTFTAVIPTNVFGPHDNFN-----IEDGHVLPGLIHKVHLAKSSGS--ALTVWG------T 209 (319)
T ss_dssp HHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTTCCCC-----TTTSCHHHHHHHHHHHHHHHTC--CEEEES------C
T ss_pred HHHHHHHHHHHHHHHhh-CCCEEEEeeccccCCCCCCC-----CccccccHHHHHHHHHHhccCC--ceEEeC------C
Confidence 99999999999998876 89999999999999853211 11122333 4554 45554 456666 7
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHH
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEK 309 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 309 (347)
+++.++|+|++|+|+++..++++.. ...+++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|
T Consensus 210 g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 287 (319)
T 4b8w_A 210 GNPRRQFIYSLDLAQLFIWVLREYN--EVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSK 287 (319)
T ss_dssp SCCEECEEEHHHHHHHHHHHHHHCC--CSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHH
T ss_pred CCeeEEEEeHHHHHHHHHHHHhccc--cCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHH
Confidence 8899999999999999999998722 23468999999999999999999999999888776666555556667899999
Q ss_pred HHHhcCCcccccHHHHHHHHHHHHhhCCC
Q 040584 310 AERELNWKAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 310 ~~~~lg~~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
+++.|||.|.++++++|+++++||+++..
T Consensus 288 ~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 316 (319)
T 4b8w_A 288 LRTYLPDFRFTPFKQAVKETCAWFTDNYE 316 (319)
T ss_dssp HHHHCTTCCCCCHHHHHHHHHHHHHHSCS
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998854
No 14
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=100.00 E-value=1.4e-47 Score=345.81 Aligned_cols=302 Identities=21% Similarity=0.299 Sum_probs=248.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++|++|++++|+... .. .++.++.+|++|.+++.++++..++|+
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~ 77 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-------------PNVEMISLDIMDSQRVKKVISDIKPDY 77 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-------------TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-------------ceeeEEECCCCCHHHHHHHHHhcCCCE
Confidence 4789999999999999999999999999999987654 11 057889999999999999998535899
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc-CCCeEEEeccccccCCC--CCCCCCCCCCCCCCCchhhhHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH-GCKNLVFSSSATAYGWP--KVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~~yg~~--~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
|||+||........+++...+++|+.++.+++++|++. ++++||++||..+||.. ...+++|+.+..+.+.|+.+|.
T Consensus 78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~ 157 (321)
T 2pk3_A 78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKA 157 (321)
T ss_dssp EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHH
T ss_pred EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHH
Confidence 99999976543345567889999999999999999876 58899999999999876 6678899999889999999999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHc---CCCCceEEecccCCCCCCceeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAV---GRRPALTVFGTDYSTKDGTVVRD 235 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~ 235 (347)
++|.+++.++.+. +++++++||+++|||.. ... ..+..++..+.. |....+..++ ++++.++
T Consensus 158 ~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~-----~~~---~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~ 222 (321)
T 2pk3_A 158 SVGMLARQYVKAY-GMDIIHTRTFNHIGPGQ-----SLG---FVTQDFAKQIVDIEMEKQEPIIKVG------NLEAVRD 222 (321)
T ss_dssp HHHHHHHHHHHHH-CCEEEEEEECEEECTTC-----CTT---SHHHHHHHHHHHHHTTSSCSEEEES------CSSCEEE
T ss_pred HHHHHHHHHHHHc-CCCEEEEEeCcccCcCC-----CCC---chHHHHHHHHHHHhcCCCCCeEEeC------CCCcEEe
Confidence 9999999988775 89999999999999842 111 112234444444 5212344555 6788999
Q ss_pred eeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCC--CCCCCchhhccChHHHHHh
Q 040584 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSG--RRPGDAEIVYASTEKAERE 313 (347)
Q Consensus 236 ~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~d~~k~~~~ 313 (347)
++|++|+|++++.+++. + ..+++||+++++.+|+.|+++.+.+.+|.+.++...+ .++.......+|++|+++.
T Consensus 223 ~v~v~Dva~a~~~~~~~---~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~ 298 (321)
T 2pk3_A 223 FTDVRDIVQAYWLLSQY---G-KTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDS 298 (321)
T ss_dssp EEEHHHHHHHHHHHHHH---C-CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHH
T ss_pred eEEHHHHHHHHHHHHhC---C-CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHH
Confidence 99999999999999987 2 3568999999999999999999999999876654444 2334445678999999999
Q ss_pred cCCcccccHHHHHHHHHHHHhhC
Q 040584 314 LNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 314 lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
|||+|+++++++|+++++||+++
T Consensus 299 lG~~p~~~~~e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 299 TGWKPRIPLEKSLFEILQSYRQA 321 (321)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHTC
T ss_pred cCCCcCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999864
No 15
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=100.00 E-value=6.3e-48 Score=346.70 Aligned_cols=302 Identities=34% Similarity=0.499 Sum_probs=247.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+||||||+||||++++++|+++|++|++++|....... .+ ..++.++.+|++|.+++.++++..++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 70 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NV----PKGVPFFRVDLRDKEGVERAFREFRPTHV 70 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GS----CTTCCEECCCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hc----ccCeEEEECCCCCHHHHHHHHHhcCCCEE
Confidence 589999999999999999999999999999885432210 00 13677889999999999999874459999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccc-cccCC-CCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSA-TAYGW-PKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~-~~yg~-~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
||+|+......+.+++...+++|+.++.+++++|++.++++||++||. .+||. ....+++|+.+..|.++|+.+|.++
T Consensus 71 i~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 150 (311)
T 2p5y_A 71 SHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAF 150 (311)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHH
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHH
Confidence 999997543334456778899999999999999999888999999999 99987 5556788988888899999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEe-----cccCCCCCCceee
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVF-----GTDYSTKDGTVVR 234 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~ 234 (347)
|.+++.++++. +++++++||+++|||... ... ...+.+ ++.++..+. .+.++ | ++.+.+
T Consensus 151 e~~~~~~~~~~-~~~~~~lrp~~v~Gp~~~-----~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~g~~~~ 215 (311)
T 2p5y_A 151 EHYLSVYGQSY-GLKWVSLRYGNVYGPRQD-----PHG-EAGVVAIFAERVLKGL--PVTLYARKTPG------DEGCVR 215 (311)
T ss_dssp HHHHHHHHHHH-CCCEEEEEECEEECTTCC-----SSS-TTHHHHHHHHHHHHTC--CEEEECSSSTT------SCCCEE
T ss_pred HHHHHHHHHHc-CCCEEEEeeccccCcCCC-----CCC-cCcHHHHHHHHHHcCC--CcEEEecccCC------CCCeEE
Confidence 99999988775 899999999999998421 111 012333 556665654 34444 5 678899
Q ss_pred eeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhc
Q 040584 235 DYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAEREL 314 (347)
Q Consensus 235 ~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 314 (347)
+|+|++|+|+++..+++. + +++||+++++++|+.|+++.+++.+|.+.++...+..+.......+|++|+++ |
T Consensus 216 ~~i~v~Dva~a~~~~~~~---~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-l 288 (311)
T 2p5y_A 216 DYVYVGDVAEAHALALFS---L---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMA-H 288 (311)
T ss_dssp CEEEHHHHHHHHHHHHHH---C---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHT-T
T ss_pred eeEEHHHHHHHHHHHHhC---C---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHH-C
Confidence 999999999999999987 2 58999999999999999999999999887765555555555677899999999 9
Q ss_pred CCcccccHHHHHHHHHHHHhhC
Q 040584 315 NWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 315 g~~p~~~~~~~i~~~~~~~~~~ 336 (347)
||+|+++++++|+++++||+++
T Consensus 289 g~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 289 GWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp TCCCSSCHHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999764
No 16
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=100.00 E-value=2.4e-47 Score=346.41 Aligned_cols=314 Identities=20% Similarity=0.254 Sum_probs=249.2
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+||||||+||||++|+++|+++|++|++++|+...... ..+..+. ...++.++.+|+.|.+++.+++++.++|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG--IEGDIQYEDGDMADACSVQRAVIKAQPQ 88 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhcc--ccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999997654210 1111110 1246889999999999999999854579
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCC-CeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC-KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
+|||+||......+.+++...+++|+.++.+++++|++.++ ++||++||..+||.....+++|+.+..|.+.|+.+|.+
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~ 168 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLY 168 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHH
Confidence 99999997543334556778999999999999999999886 89999999999998777789999999999999999999
Q ss_pred HHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
+|.+++.++.++ +++++++||+++|||.. ........+..++.++..+.... ..+| ++++.++|+|+
T Consensus 169 ~e~~~~~~~~~~-~~~~~i~r~~~v~Gp~~-----~~~~~~~~~~~~~~~~~~g~~~~-~~~g------~g~~~~~~i~v 235 (335)
T 1rpn_A 169 GHWITVNYRESF-GLHASSGILFNHESPLR-----GIEFVTRKVTDAVARIKLGKQQE-LRLG------NVDAKRDWGFA 235 (335)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEECCEECTTS-----CTTSHHHHHHHHHHHHHTTSCSC-EEES------CTTCEEECEEH
T ss_pred HHHHHHHHHHHc-CCcEEEEeeCcccCCCC-----CCCcchHHHHHHHHHHHcCCCce-EEeC------CCcceeceEEH
Confidence 999999988775 89999999999999842 11100111333555666665433 2345 67899999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC--ccc--CCCCCCCchhhccChHHHHHhcC
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP--LVK--SGRRPGDAEIVYASTEKAERELN 315 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~--~~~--~~~~~~~~~~~~~d~~k~~~~lg 315 (347)
+|+|++++.++++. . +++||+++++++|+.|+++.+.+.+|.+.+ +.. ...++.......+|++|+++.||
T Consensus 236 ~Dva~a~~~~~~~~---~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 310 (335)
T 1rpn_A 236 GDYVEAMWLMLQQD---K--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLG 310 (335)
T ss_dssp HHHHHHHHHHHHSS---S--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHC
T ss_pred HHHHHHHHHHHhcC---C--CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcC
Confidence 99999999999872 1 389999999999999999999999998642 111 11233344556789999999999
Q ss_pred CcccccHHHHHHHHHHHHhhC
Q 040584 316 WKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 316 ~~p~~~~~~~i~~~~~~~~~~ 336 (347)
|+|+++++++|+++++|++++
T Consensus 311 ~~p~~~l~e~l~~~~~~~~~~ 331 (335)
T 1rpn_A 311 WKPRTSLDELIRMMVEADLRR 331 (335)
T ss_dssp CCCCSCHHHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 17
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=100.00 E-value=4.4e-47 Score=346.16 Aligned_cols=318 Identities=23% Similarity=0.338 Sum_probs=249.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc-hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN-ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
||+|||||||||||++|+++|+++|++|++++|... ......+.+.. ..++.++.+|++|.+++.+++++.++|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-----LGNFEFVHGDIRNKNDVTRLITKYMPD 75 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-----CCceEEEEcCCCCHHHHHHHHhccCCC
Confidence 478999999999999999999999999999998542 22222222221 236889999999999999999843499
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEeccccccCCCCCC----------------CCCC
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSSATAYGWPKVV----------------PCTE 143 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~~~yg~~~~~----------------~~~e 143 (347)
+|||+||........+++...+++|+.++.+++++|++.+++ +||++||..+||..... +++|
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e 155 (347)
T 1orr_A 76 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE 155 (347)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred EEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence 999999975433334567789999999999999999998875 99999999999865433 2567
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCC---CceEE
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRR---PALTV 220 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 220 (347)
+.+..+.+.|+.+|.++|.+++.++.+. +++++++||++||||..... .....+..++.+...+.. ..+.+
T Consensus 156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (347)
T 1orr_A 156 STQLDFHSPYGCSKGAADQYMLDYARIF-GLNTVVFRHSSMYGGRQFAT-----YDQGWVGWFCQKAVEIKNGINKPFTI 229 (347)
T ss_dssp TSCCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTCCCB-----TTBCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEccCceeCcCCCCC-----CcCcHHHHHHHHHHhCcccCCCCeEE
Confidence 7777788999999999999999998876 89999999999999842111 001123335555544431 13555
Q ss_pred ecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC--cccHHHHHHHHHHHhCCCCCcccCCCCCC
Q 040584 221 FGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK--GTSVLEMVAAFEKASGKKIPLVKSGRRPG 298 (347)
Q Consensus 221 ~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 298 (347)
+| ++++.++|+|++|+|++++.+++.. ....+++||+++++ ++|+.|+++.+.+.+|.+.++...+.++.
T Consensus 230 ~g------~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 301 (347)
T 1orr_A 230 SG------NGKQVRDVLHAEDMISLYFTALANV--SKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRES 301 (347)
T ss_dssp ES------SSCCEEECEEHHHHHHHHHHHHHTH--HHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSS
T ss_pred ec------CCcceEeeEEHHHHHHHHHHHHhcc--ccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCC
Confidence 66 6889999999999999999998741 12356899999886 49999999999999998877665555555
Q ss_pred CchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCCC
Q 040584 299 DAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 299 ~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
......+|++|+++.|||+|+++++++|+++++|++++.-
T Consensus 302 ~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 302 DQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp CCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred CcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence 5556778999999999999999999999999999998853
No 18
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=100.00 E-value=1.9e-47 Score=350.78 Aligned_cols=308 Identities=20% Similarity=0.293 Sum_probs=243.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHh--CCCeEEEEeCCCchhHHHHHH---HHHhhccCCCCeEEEecCCCCHHHHHHH-Hc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLL--GGYKTVVVDNLDNASEIAVAK---VKELAGYQGNNMTFHKLDLRDKAALEVV-FA 75 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~--~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~ 75 (347)
+|+||||||+||||++|+++|++ .|++|++++|+.......... +.........++.++.+|++|.+++.++ ..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 37999999999999999999999 999999999876521100000 0000111234678999999999999998 54
Q ss_pred cCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhh
Q 040584 76 GTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGR 155 (347)
Q Consensus 76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~ 155 (347)
++|+|||+||.... ...++...+++|+.++.+++++|++.+++ ||++||+.+||.... +++|+.+..|.++|+.
T Consensus 90 --~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~ 163 (362)
T 3sxp_A 90 --HFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGF 163 (362)
T ss_dssp --CCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHH
T ss_pred --CCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHH
Confidence 79999999996542 45677889999999999999999998885 999999999998766 8999999999999999
Q ss_pred hHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCC-CccHHHHHHHHcCCCCceEEecccCCCCCCceee
Q 040584 156 SKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIP-NNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVR 234 (347)
Q Consensus 156 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 234 (347)
+|.++|.+++.++.+ ++++++||+++|||+.. ..... ..+..++..+..+. .+.++| ++++.+
T Consensus 164 sK~~~E~~~~~~~~~---~~~~~lR~~~v~Gp~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~~~~ 227 (362)
T 3sxp_A 164 SKLCMDEFVLSHSND---NVQVGLRYFNVYGPREF-----YKEKTASMVLQLALGAMAFK--EVKLFE------FGEQLR 227 (362)
T ss_dssp HHHHHHHHHHHTTTT---SCEEEEEECSEESTTCG-----GGGGGSCHHHHHHHHHHTTS--EEECSG------GGCCEE
T ss_pred HHHHHHHHHHHHhcc---CCEEEEEeCceeCcCCC-----CCCcchhHHHHHHHHHHhCC--CeEEEC------CCCeEE
Confidence 999999999988654 78999999999998421 11111 22334666666654 345445 678899
Q ss_pred eeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCC-CCCchhhccChHHHHHh
Q 040584 235 DYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR-PGDAEIVYASTEKAERE 313 (347)
Q Consensus 235 ~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~d~~k~~~~ 313 (347)
+|+|++|+|++++.+++. + ..+ +||+++++++|+.|+++.+++.+| +.++...+.. ........+|++|+++.
T Consensus 228 ~~i~v~Dva~ai~~~~~~---~-~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 301 (362)
T 3sxp_A 228 DFVYIEDVIQANVKAMKA---Q-KSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAHIEPTILD 301 (362)
T ss_dssp ECEEHHHHHHHHHHHTTC---S-SCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-------CCCCBCCHHHHHH
T ss_pred ccEEHHHHHHHHHHHHhc---C-CCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCCcCcccceecCHHHHHHH
Confidence 999999999999999886 2 334 999999999999999999999999 6665555544 44556778999999999
Q ss_pred cCCcccccHHHHHHHHHHHHhhCC
Q 040584 314 LNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 314 lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
|||+|+++++++|+++++||+++.
T Consensus 302 lG~~p~~~l~e~l~~~~~~~~~~~ 325 (362)
T 3sxp_A 302 LDYTPLYDLESGIKDYLPHIHAIF 325 (362)
T ss_dssp HCCCCCCCHHHHHHHHHHHHTCC-
T ss_pred hCCCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999998763
No 19
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=100.00 E-value=2.9e-47 Score=347.50 Aligned_cols=296 Identities=24% Similarity=0.328 Sum_probs=246.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|||||||||||++|+++|+++|++|++++|+... .++.++.+|+.|.+.+.++++ ++|+
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~ 80 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------------TGGEEVVGSLEDGQALSDAIM--GVSA 80 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------------SCCSEEESCTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------------CCccEEecCcCCHHHHHHHHh--CCCE
Confidence 4789999999999999999999999999999987654 267889999999999999998 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCC--CCCCCCCCCCCCCCCCchhhhHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGW--PKVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~--~~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|||+|+...... ......+++|+.++.+++++|++.++++|||+||..+||. ....+++|+.+..+.+.|+.+|.+
T Consensus 81 vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 158 (347)
T 4id9_A 81 VLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLL 158 (347)
T ss_dssp EEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred EEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHH
Confidence 999999765432 2237789999999999999999999999999999999998 567789999999999999999999
Q ss_pred HHHHHHHHhhhcCCceEEEeeccccc-------------CCCCCCCCCCCCC-------CCCccH-HHHHHHHcCCCCce
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPV-------------GAHPSGKGEDPRG-------IPNNLM-PFVTQVAVGRRPAL 218 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~-------------G~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~ 218 (347)
+|.+++.++++. +++++++||+++| ||.. .... ....+. .++..+..+. .+
T Consensus 159 ~E~~~~~~~~~~-~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 230 (347)
T 4id9_A 159 GEELVRFHQRSG-AMETVILRFSHTQDATELLDEDSFFSGPRF-----FLRPRIHQQQNFGNAAIAELLQSRDIGE--PS 230 (347)
T ss_dssp HHHHHHHHHHHS-SSEEEEEEECEEECGGGTTCTTSSSHHHHH-----BHHHHHHHHHHHTCHHHHHHHHHHCCSS--CC
T ss_pred HHHHHHHHHHhc-CCceEEEccceEeecccccccccccCCCCc-----ccccccccccccchhHHHHHHHHHHcCC--Ce
Confidence 999999998875 9999999999999 6521 0000 001233 3555655554 34
Q ss_pred EEecccCCCCCCceeeee----eeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCC
Q 040584 219 TVFGTDYSTKDGTVVRDY----IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSG 294 (347)
Q Consensus 219 ~~~g~~~~~~~~~~~~~~----i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 294 (347)
.++| ++.+.++| +|++|+|++++.++++ +...+++||+++++++|+.|+++.+++.+|.+.++...+
T Consensus 231 ~~~g------~~~~~~~~~~~~i~v~Dva~ai~~~~~~---~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p 301 (347)
T 4id9_A 231 HILA------RNENGRPFRMHITDTRDMVAGILLALDH---PEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFP 301 (347)
T ss_dssp EEEE------ECTTCCBCEECEEEHHHHHHHHHHHHHC---GGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECS
T ss_pred EEeC------CCCcccCCccCcEeHHHHHHHHHHHhcC---cccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCC
Confidence 4555 57788889 9999999999999987 224579999999999999999999999999887665444
Q ss_pred CCCCCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 295 RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 295 ~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
..+. ...+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 302 ~~~~---~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 302 GDGV---YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL 341 (347)
T ss_dssp SCCC---BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred Cccc---ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 3333 677899999999999999999999999999998764
No 20
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.4e-46 Score=341.52 Aligned_cols=307 Identities=27% Similarity=0.407 Sum_probs=245.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
+|+||||||+||||++|+++|+++| ++|++++|....... +.+..+. ...++.++.+|++|.+++.+++. ++
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--~~ 76 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNP--ANLKDLE--DDPRYTFVKGDVADYELVKELVR--KV 76 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGGTTTT--TCTTEEEEECCTTCHHHHHHHHH--TC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCch--hHHhhhc--cCCceEEEEcCCCCHHHHHHHhh--CC
Confidence 3789999999999999999999986 999999986421100 0111110 13478899999999999999996 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCC-CeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC-KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
|+|||+||......+.+++...+++|+.++.+++++|++.+. ++||++||..+||.....+++|+.+..+.+.|+.+|.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~ 156 (336)
T 2hun_A 77 DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKA 156 (336)
T ss_dssp SEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHH
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHH
Confidence 999999997543334456778999999999999999998874 6999999999999876778899999889999999999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
++|.+++.++.+. +++++++||+++|||.. .. ..+. .++.++..+. .+.++| ++.+.++++
T Consensus 157 ~~e~~~~~~~~~~-~~~~~ilrp~~v~g~~~-----~~----~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i 218 (336)
T 2hun_A 157 ASDMLVLGWTRTY-NLNASITRCTNNYGPYQ-----FP----EKLIPKTIIRASLGL--KIPIYG------TGKNVRDWL 218 (336)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECEEESTTC-----CT----TSHHHHHHHHHHTTC--CEEEET------C---CEEEE
T ss_pred HHHHHHHHHHHHh-CCCEEEEeeeeeeCcCC-----Cc----CchHHHHHHHHHcCC--CceEeC------CCCceeeeE
Confidence 9999999998875 89999999999999842 11 1233 3556666654 355556 678899999
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC-cccCCCCCCCchhhccChHHHHHhcCC
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP-LVKSGRRPGDAEIVYASTEKAERELNW 316 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~d~~k~~~~lg~ 316 (347)
|++|+|++++.+++. ...+++||+++++++|+.|+++.+++.+|.+.+ +...+..+.......+|++|+++.|||
T Consensus 219 ~v~Dva~~~~~~~~~----~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 294 (336)
T 2hun_A 219 YVEDHVRAIELVLLK----GESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKW 294 (336)
T ss_dssp EHHHHHHHHHHHHHH----CCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCC
T ss_pred EHHHHHHHHHHHHhC----CCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCC
Confidence 999999999999987 235689999999999999999999999998754 333333333334567899999999999
Q ss_pred cccccHHHHHHHHHHHHhhC
Q 040584 317 KAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 317 ~p~~~~~~~i~~~~~~~~~~ 336 (347)
+|+++++++|+++++||+++
T Consensus 295 ~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 295 RPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp CCSSCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhC
Confidence 99999999999999999876
No 21
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=100.00 E-value=1.9e-46 Score=340.77 Aligned_cols=308 Identities=29% Similarity=0.427 Sum_probs=249.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC---C---CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG---G---YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~---g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
|+||||||+||||++|+++|+++ | ++|++++|....... +.+..+. ...++.++.+|++|.+++.+++.
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~- 75 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVD--ADPRLRFVHGDIRDAGLLARELR- 75 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGT--TCTTEEEEECCTTCHHHHHHHTT-
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch--hhhhhcc--cCCCeEEEEcCCCCHHHHHHHhc-
Confidence 58999999999999999999997 8 999999986531100 0111111 13478899999999999999996
Q ss_pred CCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhh
Q 040584 77 TKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRS 156 (347)
Q Consensus 77 ~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~s 156 (347)
++|+|||+||......+.+++...+++|+.++.+++++|++.++++||++||..+||.....+++|+.+..+.+.|+.+
T Consensus 76 -~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~s 154 (337)
T 1r6d_A 76 -GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAAS 154 (337)
T ss_dssp -TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHH
T ss_pred -CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHH
Confidence 6999999999754333345677899999999999999999999999999999999997766788999998899999999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCCceeee
Q 040584 157 KLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235 (347)
Q Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 235 (347)
|.++|.+++.++++. +++++++||+++|||.. .. ..+. .++.++..+. .+.++| ++++.++
T Consensus 155 K~~~e~~~~~~~~~~-g~~~~ilrp~~v~G~~~-----~~----~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~ 216 (337)
T 1r6d_A 155 KAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQ-----HP----EKLIPLFVTNLLDGG--TLPLYG------DGANVRE 216 (337)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECEEECTTC-----CT----TSHHHHHHHHHHTTC--CEEEET------TSCCEEE
T ss_pred HHHHHHHHHHHHHHH-CCCEEEEEeeeeECCCC-----CC----CChHHHHHHHHhcCC--CcEEeC------CCCeeEe
Confidence 999999999988775 89999999999999842 11 1233 3556666554 345556 6788999
Q ss_pred eeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC-cccCCCCCCCchhhccChHHHHHhc
Q 040584 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP-LVKSGRRPGDAEIVYASTEKAEREL 314 (347)
Q Consensus 236 ~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~d~~k~~~~l 314 (347)
++|++|+|+++..+++. ...+++||+++++++|+.|+++.+++.+|.+.+ +...+..+.....+.+|++|+++.|
T Consensus 217 ~i~v~Dva~a~~~~~~~----~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 292 (337)
T 1r6d_A 217 WVHTDDHCRGIALVLAG----GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIEREL 292 (337)
T ss_dssp EEEHHHHHHHHHHHHHH----CCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHH
T ss_pred eEeHHHHHHHHHHHHhC----CCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHc
Confidence 99999999999999987 235689999999999999999999999998753 2233323333344568999999999
Q ss_pred CCcccccHHHHHHHHHHHHhhCCC
Q 040584 315 NWKAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 315 g~~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
||+|+++++++|+++++||+++..
T Consensus 293 G~~p~~~~~e~l~~~~~~~~~~~~ 316 (337)
T 1r6d_A 293 GYRPQVSFADGLARTVRWYRENRG 316 (337)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhchh
Confidence 999999999999999999988743
No 22
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=100.00 E-value=4.2e-46 Score=339.94 Aligned_cols=307 Identities=25% Similarity=0.353 Sum_probs=247.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
||+||||||+||||++|+++|+++ |++|++++|....... +.+..+ ...++.++.+|++|.+++.++++ ++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~--~~ 76 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEAI---LGDRVELVVGDIADAELVDKLAA--KA 76 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGTGGG---CSSSEEEEECCTTCHHHHHHHHT--TC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh--hHHhhh---ccCCeEEEECCCCCHHHHHHHhh--cC
Confidence 479999999999999999999998 8999999986532110 011111 12578899999999999999998 58
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCC------------CCCCCCCCC
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKV------------VPCTEEFPL 147 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~------------~~~~e~~~~ 147 (347)
|+|||+||......+..++...+++|+.++.+++++|++.++ +||++||..+||.... .+++|+.+.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~ 155 (348)
T 1oc2_A 77 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY 155 (348)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence 999999997643334456788999999999999999999888 9999999999986532 678898888
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
.+.+.|+.+|.++|.+++.++.+. +++++++||+++|||.. ... ..+..++..+..+.. +.+++
T Consensus 156 ~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilrp~~v~G~~~-----~~~---~~~~~~~~~~~~~~~--~~~~~----- 219 (348)
T 1oc2_A 156 NPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNYGPYQ-----HIE---KFIPRQITNILAGIK--PKLYG----- 219 (348)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEESTTC-----CTT---SHHHHHHHHHHHTCC--CEEET-----
T ss_pred CCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEeeceeeCCCC-----Ccc---chHHHHHHHHHcCCC--ceEec-----
Confidence 899999999999999999998776 89999999999999842 111 122335666666653 34455
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC-cccCCCCCCCchhhccC
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP-LVKSGRRPGDAEIVYAS 306 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~d 306 (347)
++.+.++++|++|+|++++.+++. ...+++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|
T Consensus 220 -~~~~~~~~i~v~Dva~~~~~~~~~----~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d 294 (348)
T 1oc2_A 220 -EGKNVRDWIHTNDHSTGVWAILTK----GRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAID 294 (348)
T ss_dssp -TSCCEEECEEHHHHHHHHHHHHHH----CCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBC
T ss_pred -CCCceEeeEEHHHHHHHHHHHhhC----CCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccC
Confidence 678899999999999999999987 235689999999999999999999999998754 33333333333456789
Q ss_pred hHHHHHhcCCccccc-HHHHHHHHHHHHhhCC
Q 040584 307 TEKAERELNWKAKYG-IDEMCRDQWNWASKNP 337 (347)
Q Consensus 307 ~~k~~~~lg~~p~~~-~~~~i~~~~~~~~~~~ 337 (347)
++|+++.|||+|+++ ++++|+++++||+++.
T Consensus 295 ~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~ 326 (348)
T 1oc2_A 295 ASKLRDELGWTPQFTDFSEGLEETIQWYTDNQ 326 (348)
T ss_dssp CHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHcCCCCCCCcHHHHHHHHHHHHHHhh
Confidence 999999999999998 9999999999998763
No 23
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=100.00 E-value=1.3e-46 Score=342.70 Aligned_cols=319 Identities=18% Similarity=0.249 Sum_probs=246.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC-HHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD-KAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d 80 (347)
|+|||||||||||++|+++|+++ |++|++++|+........ ...++.++.+|+.| .+.+.++++ ++|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~--~~d 69 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---------NHPHFHFVEGDISIHSEWIEYHVK--KCD 69 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT---------TCTTEEEEECCTTTCSHHHHHHHH--HCS
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh---------cCCCeEEEeccccCcHHHHHhhcc--CCC
Confidence 58999999999999999999998 899999999866532110 13478899999998 456888887 599
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCC-------CCCCch
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPL-------QAMNPY 153 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~-------~~~~~Y 153 (347)
+|||+||.........++...+++|+.++.+++++|++.+ ++||++||..+||.....+++|+.+. .|.+.|
T Consensus 70 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y 148 (345)
T 2bll_A 70 VVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIY 148 (345)
T ss_dssp EEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHH
T ss_pred EEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCccccc
Confidence 9999999754323344667789999999999999999988 89999999999998776677887653 344589
Q ss_pred hhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCcee
Q 040584 154 GRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233 (347)
Q Consensus 154 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 233 (347)
+.+|.++|.+++.++++. +++++++||+++|||...............+..++..+..+. .+.+++ ++++.
T Consensus 149 ~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~~~ 219 (345)
T 2bll_A 149 SVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS--PIKLID------GGKQK 219 (345)
T ss_dssp HHHHHHHHHHHHHHHHHH-CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTC--CEEEGG------GSCCE
T ss_pred HHHHHHHHHHHHHHHHhc-CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCC--CcEEEC------CCCEE
Confidence 999999999999988775 899999999999998532110000000112334666666665 345555 67889
Q ss_pred eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC-cccHHHHHHHHHHHhCCCCCcccCCCCC---------------
Q 040584 234 RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK-GTSVLEMVAAFEKASGKKIPLVKSGRRP--------------- 297 (347)
Q Consensus 234 ~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------- 297 (347)
++|+|++|+|++++.+++... ....+++||+++++ .+|+.|+++.+++.+|.+.+....+...
T Consensus 220 ~~~i~v~Dva~a~~~~~~~~~-~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (345)
T 2bll_A 220 RCFTDIRDGIEALYRIIENAG-NRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGY 298 (345)
T ss_dssp EECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC----------
T ss_pred EEEEEHHHHHHHHHHHHhhcc-ccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccc
Confidence 999999999999999998621 11456899999886 8999999999999999765432222111
Q ss_pred CCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCCCCCCCC
Q 040584 298 GDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYESP 343 (347)
Q Consensus 298 ~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~~~~~~ 343 (347)
.......+|++|+++.|||+|+++++++|+++++||+++....++|
T Consensus 299 ~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~~~~~ 344 (345)
T 2bll_A 299 QDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKP 344 (345)
T ss_dssp --CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCTTC--
T ss_pred cchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCCCCCCC
Confidence 1224567899999999999999999999999999999887766665
No 24
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=4.3e-46 Score=369.28 Aligned_cols=338 Identities=52% Similarity=0.929 Sum_probs=259.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++|++|++++|.........+.+..+. ..++.++.+|++|.+++.+++++.++|+
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT---KHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH---TSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc---CCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 4799999999999999999999999999999987654332223332221 3468889999999999999998556999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCC----CCCCCCCCCCCCCCchhhhH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPK----VVPCTEEFPLQAMNPYGRSK 157 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~----~~~~~e~~~~~~~~~Y~~sK 157 (347)
|||+||........+.+...+++|+.++.+++++|++.++++||++||.++||... ..+++|+.+..+.+.|+.+|
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK 167 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTK 167 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHH
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHH
Confidence 99999976433334456678999999999999999998899999999999998642 25678888888899999999
Q ss_pred HHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCC-CCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeee
Q 040584 158 LFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235 (347)
Q Consensus 158 ~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 235 (347)
.++|.+++.++.+. .+++++++||+++|||++.+. |....+....+.+++.+...+....+.++|.....+++++.++
T Consensus 168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 247 (699)
T 1z45_A 168 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 247 (699)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEEC
T ss_pred HHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEe
Confidence 99999999887653 489999999999999977654 4333233345667666666554333444442111124788999
Q ss_pred eeeHHHHHHHHHHHHHhcC---CCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHH
Q 040584 236 YIHVVDLADGHIAALRKLD---DPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAER 312 (347)
Q Consensus 236 ~i~v~D~a~a~~~~~~~~~---~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~ 312 (347)
|||++|+|++++.+++... .....+++||+++++.+|+.|+++.+++.+|.+.++...+..........+|++|+++
T Consensus 248 ~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~ka~~ 327 (699)
T 1z45_A 248 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKR 327 (699)
T ss_dssp EEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHHHHH
T ss_pred eEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCCccccccCCHHHHHH
Confidence 9999999999999987521 1122358999999999999999999999999887665544444445567899999999
Q ss_pred hcCCcccccHHHHHHHHHHHHhhCCCCCCC
Q 040584 313 ELNWKAKYGIDEMCRDQWNWASKNPYGYES 342 (347)
Q Consensus 313 ~lg~~p~~~~~~~i~~~~~~~~~~~~~~~~ 342 (347)
.|||+|+++++++|+++++||++++..|.-
T Consensus 328 ~LG~~p~~~l~egl~~~~~w~~~~~~~~~~ 357 (699)
T 1z45_A 328 ELKWQTELQVEDSCKDLWKWTTENPFGYQL 357 (699)
T ss_dssp HTCCCCCCCHHHHHHHHHHHHHHCTTCSCC
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhCCcchhh
Confidence 999999999999999999999999887764
No 25
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=100.00 E-value=2.6e-46 Score=344.81 Aligned_cols=317 Identities=22% Similarity=0.259 Sum_probs=246.8
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhcc----CCCCeEEEecCCCCHHHHHHHHcc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGY----QGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
|+|+||||||+||||++|+++|+++|++|++++|+...... ..+..+... ...++.++.+|++|.+++.+++++
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT--GRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE 100 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--TTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccch--hhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHh
Confidence 56899999999999999999999999999999987653100 000000000 124688899999999999999985
Q ss_pred CCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCC---CeEEEeccccccCCCCCCCCCCCCCCCCCCch
Q 040584 77 TKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC---KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPY 153 (347)
Q Consensus 77 ~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y 153 (347)
.++|+|||+||......+.+++...+++|+.++.+++++|++.++ ++||++||..+||.....+++|+.+..|.+.|
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y 180 (375)
T 1t2a_A 101 VKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY 180 (375)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHH
T ss_pred cCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChh
Confidence 457999999997543333456778899999999999999999887 79999999999998777789999998899999
Q ss_pred hhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCcee
Q 040584 154 GRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233 (347)
Q Consensus 154 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 233 (347)
+.+|.++|.+++.++.++ +++++++|++++|||.. ........+..++.++..+.... ..+| ++++.
T Consensus 181 ~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~~~gp~~-----~~~~~~~~~~~~~~~~~~g~~~~-~~~g------~~~~~ 247 (375)
T 1t2a_A 181 GAAKLYAYWIVVNFREAY-NLFAVNGILFNHESPRR-----GANFVTRKISRSVAKIYLGQLEC-FSLG------NLDAK 247 (375)
T ss_dssp HHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTS-----CTTSHHHHHHHHHHHHHHTSCSC-EEES------CTTCE
T ss_pred HHHHHHHHHHHHHHHHHh-CCCEEEEecccccCCCC-----CCCcchHHHHHHHHHHHcCCCce-eEeC------CCCce
Confidence 999999999999998775 89999999999999842 11100111233555556665332 2345 67899
Q ss_pred eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcc-------------------cCC
Q 040584 234 RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV-------------------KSG 294 (347)
Q Consensus 234 ~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~-------------------~~~ 294 (347)
++|+|++|+|++++.+++.. . +++||+++++++|+.|+++.+++.+|.+.++. ..+
T Consensus 248 ~~~i~v~Dva~a~~~~~~~~---~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 322 (375)
T 1t2a_A 248 RDWGHAKDYVEAMWLMLQND---E--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDL 322 (375)
T ss_dssp ECCEEHHHHHHHHHHHHHSS---S--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECG
T ss_pred eeeEEHHHHHHHHHHHHhcC---C--CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCc
Confidence 99999999999999999862 1 38999999999999999999999999864321 001
Q ss_pred --CCCCCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 295 --RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 295 --~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
.++.......+|++|+++.|||+|+++++++|+++++|+++..
T Consensus 323 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 367 (375)
T 1t2a_A 323 KYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELM 367 (375)
T ss_dssp GGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhh
Confidence 1223334566899999999999999999999999999998753
No 26
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=100.00 E-value=1.9e-46 Score=343.53 Aligned_cols=313 Identities=20% Similarity=0.256 Sum_probs=246.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++|++|++++|+..........+. ...++.++.+|+.|.+++.++++..++|+
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-----VADGMQSEIGDIRDQNKLLESIREFQPEI 83 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-----TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-----cCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence 4799999999999999999999999999999998765433222211 13478899999999999999998545899
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccccCCCCC-CCCCCCCCCCCCCchhhhHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATAYGWPKV-VPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~yg~~~~-~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|||+||........+++...+++|+.++.+++++|++.+ +++||++||..+||.... .+++|+.+..+.+.|+.+|.+
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~ 163 (357)
T 1rkx_A 84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGC 163 (357)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHH
T ss_pred EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHH
Confidence 999999643323445677889999999999999999886 889999999999987553 467888888889999999999
Q ss_pred HHHHHHHHhhhcC--------CceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCC
Q 040584 160 IEEICRDVHRSDS--------EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDG 230 (347)
Q Consensus 160 ~e~~~~~~~~~~~--------~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~ 230 (347)
+|.+++.++.++. +++++++||+++|||.. .. ...+. .++..+..+.. +.+ + ++
T Consensus 164 ~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~-----~~---~~~~~~~~~~~~~~g~~--~~~-~------~~ 226 (357)
T 1rkx_A 164 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD-----WA---LDRIVPDILRAFEQSQP--VII-R------NP 226 (357)
T ss_dssp HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC-----CC---SSCHHHHHHHHHHTTCC--EEC-S------CT
T ss_pred HHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC-----Cc---cccHHHHHHHHHhcCCC--EEE-C------CC
Confidence 9999999876542 89999999999999842 11 11244 45666666653 332 2 46
Q ss_pred ceeeeeeeHHHHHHHHHHHHHhcC-CCCCCCeeEEccCC--CcccHHHHHHHHHHHhCCCCCcccCCC-CCCCchhhccC
Q 040584 231 TVVRDYIHVVDLADGHIAALRKLD-DPKVGCEVYNLGTG--KGTSVLEMVAAFEKASGKKIPLVKSGR-RPGDAEIVYAS 306 (347)
Q Consensus 231 ~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~~nv~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d 306 (347)
++.++|+|++|+|++++.+++... .+...+++||++++ +++|+.|+++.+.+.+|.+.++...+. .+.......+|
T Consensus 227 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d 306 (357)
T 1rkx_A 227 HAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLD 306 (357)
T ss_dssp TCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBC
T ss_pred CCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCC
Confidence 788999999999999999887421 11234689999874 689999999999999998766443321 23334567799
Q ss_pred hHHHHHhcCCcccccHHHHHHHHHHHHhhC
Q 040584 307 TEKAERELNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 307 ~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
++|+++.|||+|+++++++|+++++||+++
T Consensus 307 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 336 (357)
T 1rkx_A 307 CSKAKMQLGWHPRWNLNTTLEYIVGWHKNW 336 (357)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875
No 27
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=100.00 E-value=2.4e-47 Score=344.12 Aligned_cols=301 Identities=26% Similarity=0.435 Sum_probs=242.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+|||||||||||++|+++|+++|++|++++|+..........+..+ ....+++++.+|+. ++|
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~------------~~d 71 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKF--LEKPVLELEERDLS------------DVR 71 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEE--ECSCGGGCCHHHHT------------TEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhh--ccCCCeeEEeCccc------------cCC
Confidence 3689999999999999999999999999999998765210000000000 00123344444443 599
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+|+.........++...++ |+.++.+++++|++.++++|||+||..+||.....+++|+.+..|.+.|+.+|.++
T Consensus 72 ~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~ 150 (321)
T 3vps_A 72 LVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGL 150 (321)
T ss_dssp EEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred EEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence 99999997654445566677788 99999999999999999999999999999988888999999999999999999999
Q ss_pred HHHHHHHhhhcCCc-eEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 161 EEICRDVHRSDSEW-KIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 161 e~~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
|.+++.++.+. ++ +++++||+++|||.. .. ...+..++..+..+. .+.++| ++++.++|+|+
T Consensus 151 E~~~~~~~~~~-~~~~~~ilRp~~v~G~~~-----~~---~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~v~v 213 (321)
T 3vps_A 151 EMVAGAHQRAS-VAPEVGIVRFFNVYGPGE-----RP---DALVPRLCANLLTRN--ELPVEG------DGEQRRDFTYI 213 (321)
T ss_dssp HHHHHHHHHSS-SSCEEEEEEECEEECTTC-----CT---TSHHHHHHHHHHHHS--EEEEET------TSCCEECEEEH
T ss_pred HHHHHHHHHHc-CCCceEEEEeccccCcCC-----CC---CChHHHHHHHHHcCC--CeEEeC------CCCceEceEEH
Confidence 99999998875 88 999999999999842 11 112334566666654 455666 68899999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCcc-
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKA- 318 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p- 318 (347)
+|+|+++..++.+ +. .+ +||+++++++|+.|+++.+. .+|.+.++...+..+.......+|++|+++.|||+|
T Consensus 214 ~Dva~~~~~~~~~---~~-~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 287 (321)
T 3vps_A 214 TDVVDKLVALANR---PL-PS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSG 287 (321)
T ss_dssp HHHHHHHHHGGGS---CC-CS-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSC
T ss_pred HHHHHHHHHHHhc---CC-CC-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCC
Confidence 9999999999987 22 24 99999999999999999999 999988777666666677788999999999999999
Q ss_pred cccHHHHHHHHHHHHhhCCCC
Q 040584 319 KYGIDEMCRDQWNWASKNPYG 339 (347)
Q Consensus 319 ~~~~~~~i~~~~~~~~~~~~~ 339 (347)
+++++++|+++++||+++...
T Consensus 288 ~~~~~~~l~~~~~~~~~~~~~ 308 (321)
T 3vps_A 288 GIGIEEGIRLTLEWWQSRDLD 308 (321)
T ss_dssp CCCHHHHHHHHHHHHHTSCTT
T ss_pred cCCHHHHHHHHHHHHHhCCCc
Confidence 889999999999999988654
No 28
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=100.00 E-value=7.3e-47 Score=348.75 Aligned_cols=311 Identities=30% Similarity=0.446 Sum_probs=240.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+||||||+||||++|+++|+++| ++|++++|+........ . ...+++++.+|+.|.+++.++++ ++|
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l---~-----~~~~v~~~~~Dl~d~~~l~~~~~--~~d 101 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV---P-----DHPAVRFSETSITDDALLASLQD--EYD 101 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGS---C-----CCTTEEEECSCTTCHHHHHHCCS--CCS
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhc---c-----CCCceEEEECCCCCHHHHHHHhh--CCC
Confidence 4789999999999999999999999 99999998765421100 0 13478899999999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc-CCCeEEEeccccccCCCCCCCCC--CCC---CC-CCCCch
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH-GCKNLVFSSSATAYGWPKVVPCT--EEF---PL-QAMNPY 153 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~~yg~~~~~~~~--e~~---~~-~~~~~Y 153 (347)
+|||+||......+..++...+++|+.++.+++++|++. ++++||++||..+||.....+++ |+. +. .|.++|
T Consensus 102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y 181 (377)
T 2q1s_A 102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPY 181 (377)
T ss_dssp EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHH
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCch
Confidence 999999975433334567789999999999999999998 88999999999999987666777 877 66 788999
Q ss_pred hhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCC-CC---CCCCCCCccH-HHHHHHHcCCCCceEEecccCCCC
Q 040584 154 GRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK-GE---DPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 154 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
+.+|.++|.+++.++.+. +++++++||+++|||...+. |. ........+. .++..+..+.. +.++|
T Consensus 182 ~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~g------ 252 (377)
T 2q1s_A 182 SMSKIFGEFYSVYYHKQH-QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMP--LPLEN------ 252 (377)
T ss_dssp HHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCC--CCCSG------
T ss_pred HHHHHHHHHHHHHHHHHh-CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCC--eEEeC------
Confidence 999999999999988775 89999999999999853110 00 1000001233 35666666653 33344
Q ss_pred CCceeeeeeeHHHHHHH-HHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCch-hhccC
Q 040584 229 DGTVVRDYIHVVDLADG-HIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAE-IVYAS 306 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a-~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~-~~~~d 306 (347)
++++.++|+|++|+|++ ++.+++. +. .+ +||+++++++|+.|+++.+.+.+|.+.++...+.++.... ...+|
T Consensus 253 ~g~~~~~~i~v~Dva~a~i~~~~~~---~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d 327 (377)
T 2q1s_A 253 GGVATRDFIFVEDVANGLIACAADG---TP-GG-VYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGS 327 (377)
T ss_dssp GGCCEECCEEHHHHHHHHHHHHHHC---CT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCC
T ss_pred CCCeEEeeEEHHHHHHHHHHHHHhc---CC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccC
Confidence 57889999999999999 9999887 22 44 9999999999999999999999998876555554444445 67899
Q ss_pred hHHHHHhcCCcccccHHHHHHHHHHHHhhC
Q 040584 307 TEKAERELNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 307 ~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
++|+++.|||+|+++++++|+++++||+++
T Consensus 328 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 328 PEKARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999875
No 29
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=100.00 E-value=1.7e-46 Score=338.75 Aligned_cols=300 Identities=20% Similarity=0.305 Sum_probs=240.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++|++|+++.|+. .+|+.|.+++.++++..++|+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------------~~D~~d~~~~~~~~~~~~~d~ 58 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------------ELNLLDSRAVHDFFASERIDQ 58 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------------cCCccCHHHHHHHHHhcCCCE
Confidence 47999999999999999999999999999887641 269999999999997445999
Q ss_pred EEEccccccC-CccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCC----CCCCC-Cchhh
Q 040584 82 VIHFAGLKAV-GESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEF----PLQAM-NPYGR 155 (347)
Q Consensus 82 vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~----~~~~~-~~Y~~ 155 (347)
|||+|+.... .....++...+++|+.++.+++++|++.++++||++||..+||.....+++|++ +..|. +.|+.
T Consensus 59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~ 138 (321)
T 1e6u_A 59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI 138 (321)
T ss_dssp EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHH
T ss_pred EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHH
Confidence 9999997532 123456678899999999999999999999999999999999987777888886 44553 58999
Q ss_pred hHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcC---CCCceEEecccCCCCCCc
Q 040584 156 SKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVG---RRPALTVFGTDYSTKDGT 231 (347)
Q Consensus 156 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~g~~~~~~~~~ 231 (347)
+|.++|.+++.++++. +++++++||+++|||...+. .....+. .++.++..+ ....+.++| +++
T Consensus 139 sK~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~g~ 206 (321)
T 1e6u_A 139 AKIAGIKLCESYNRQY-GRDYRSVMPTNLYGPHDNFH-----PSNSHVIPALLRRFHEATAQKAPDVVVWG------SGT 206 (321)
T ss_dssp HHHHHHHHHHHHHHHH-CCEEEEEEECEEESTTCCCC-----TTCSSHHHHHHHHHHHHHHHTCSEEEEES------CSC
T ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEeCCcCCcCCCCC-----CCCCccHHHHHHHHHHhhhcCCCceEEcC------CCC
Confidence 9999999999988775 89999999999999853211 1111233 355555432 112455566 688
Q ss_pred eeeeeeeHHHHHHHHHHHHHhcCCC-----CCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccC
Q 040584 232 VVRDYIHVVDLADGHIAALRKLDDP-----KVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYAS 306 (347)
Q Consensus 232 ~~~~~i~v~D~a~a~~~~~~~~~~~-----~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d 306 (347)
+.++|+|++|+|++++.++++.... ...+++||+++++++|+.|+++.+++.+|.+.++...+..+.......+|
T Consensus 207 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d 286 (321)
T 1e6u_A 207 PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 286 (321)
T ss_dssp CEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBC
T ss_pred EEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCC
Confidence 9999999999999999999862110 01258999999999999999999999999887655545444445567899
Q ss_pred hHHHHHhcCCcccccHHHHHHHHHHHHhhCCC
Q 040584 307 TEKAERELNWKAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 307 ~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
++|+++ |||+|+++++++|+++++||+++..
T Consensus 287 ~~k~~~-lG~~p~~~~~~~l~~~~~~~~~~~~ 317 (321)
T 1e6u_A 287 VTRLHQ-LGWYHEISLEAGLASTYQWFLENQD 317 (321)
T ss_dssp CHHHHH-TTCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHh-cCCccCCcHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999998753
No 30
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=100.00 E-value=6e-46 Score=342.80 Aligned_cols=305 Identities=21% Similarity=0.259 Sum_probs=246.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+||||||+||||++|+++|+++||+|++++|+....... ...+++++.+|+.|.+++.++++ ++|+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~v~~~~~Dl~d~~~~~~~~~--~~d~ 96 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----------DMFCDEFHLVDLRVMENCLKVTE--GVDH 96 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----------GGTCSEEEECCTTSHHHHHHHHT--TCSE
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----------ccCCceEEECCCCCHHHHHHHhC--CCCE
Confidence 58999999999999999999999999999999976543210 02367899999999999999998 6999
Q ss_pred EEEccccccCCcc-ccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCC-----CCCCCCCC--CCCCCCch
Q 040584 82 VIHFAGLKAVGES-VQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPK-----VVPCTEEF--PLQAMNPY 153 (347)
Q Consensus 82 vih~a~~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~-----~~~~~e~~--~~~~~~~Y 153 (347)
|||+|+....... .+++...+++|+.++.+++++|++.++++||++||..+|+... ..+++|++ +..+.+.|
T Consensus 97 Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y 176 (379)
T 2c5a_A 97 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 176 (379)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred EEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh
Confidence 9999997543222 4567789999999999999999999999999999999998532 23467766 66778899
Q ss_pred hhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCcee
Q 040584 154 GRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233 (347)
Q Consensus 154 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 233 (347)
+.+|.++|.+++.++++. +++++++||+++|||.....+ +....+..++.++..+.. .+.++| ++++.
T Consensus 177 ~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~g------~g~~~ 244 (379)
T 2c5a_A 177 GLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPFGTWKG----GREKAPAAFCRKAQTSTD-RFEMWG------DGLQT 244 (379)
T ss_dssp HHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCCSS----SCCCHHHHHHHHHHHCSS-CEEEES------CSCCE
T ss_pred HHHHHHHHHHHHHHHHHH-CCCEEEEEeCceeCcCCCccc----ccccHHHHHHHHHHhCCC-ceEEeC------CCCee
Confidence 999999999999988775 899999999999998432110 111123346666666543 355566 67889
Q ss_pred eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHh
Q 040584 234 RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERE 313 (347)
Q Consensus 234 ~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 313 (347)
++|+|++|+|++++.+++. + .+++||+++++.+|+.|+++.+.+.+|.+.++...+... ......+|++|+++.
T Consensus 245 ~~~i~v~Dva~ai~~~l~~---~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-~~~~~~~d~~k~~~~ 318 (379)
T 2c5a_A 245 RSFTFIDECVEGVLRLTKS---D--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-GVRGRNSDNNLIKEK 318 (379)
T ss_dssp ECCEEHHHHHHHHHHHHHS---S--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-CCSBCEECCHHHHHH
T ss_pred EEEEEHHHHHHHHHHHhhc---c--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC-CcccccCCHHHHHHH
Confidence 9999999999999999986 2 358999999999999999999999999887655444322 234567899999999
Q ss_pred cCCcccccHHHHHHHHHHHHhhC
Q 040584 314 LNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 314 lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
|||+|+++++++|+++++||+++
T Consensus 319 lG~~p~~~l~e~l~~~~~~~~~~ 341 (379)
T 2c5a_A 319 LGWAPNMRLKEGLRITYFWIKEQ 341 (379)
T ss_dssp HSCCCCCCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999765
No 31
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=100.00 E-value=1.7e-46 Score=333.56 Aligned_cols=278 Identities=15% Similarity=0.159 Sum_probs=233.2
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+|||||||||||+++++.|+++||+|++++|. .+|+.|.+.+.++++..++|
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------------~~D~~d~~~~~~~~~~~~~d 58 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------------LLDITNISQVQQVVQEIRPH 58 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------------TSCTTCHHHHHHHHHHHCCS
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------------ccCCCCHHHHHHHHHhcCCC
Confidence 55699999999999999999999999999999872 27999999999999855699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+||........+++...+++|+.++.+++++|++.++ ||||+||..+||.....+++|+++..|.+.|+.+|.++
T Consensus 59 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~ 137 (287)
T 3sc6_A 59 IIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAG 137 (287)
T ss_dssp EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred EEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999998765445567888999999999999999999988 89999999999988888999999999999999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
|.+++.+.. +++++||+++|||.. ..+.+ ++..+..+. .+.++| ++.++++|+
T Consensus 138 E~~~~~~~~-----~~~ilR~~~v~G~~~-----------~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~i~v 191 (287)
T 3sc6_A 138 EQFVKELHN-----KYFIVRTSWLYGKYG-----------NNFVKTMIRLGKERE--EISVVA--------DQIGSPTYV 191 (287)
T ss_dssp HHHHHHHCS-----SEEEEEECSEECSSS-----------CCHHHHHHHHHTTCS--EEEEEC--------SCEECCEEH
T ss_pred HHHHHHhCC-----CcEEEeeeeecCCCC-----------CcHHHHHHHHHHcCC--CeEeec--------CcccCceEH
Confidence 999998743 579999999999841 12333 455544443 455443 488999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccC-----CCCCCCchhhccChHHHHHhc
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKS-----GRRPGDAEIVYASTEKAEREL 314 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~l 314 (347)
+|+|+++..++++ +. +++||+++++++|+.|+++.+++.+|.+.++... +..........+|++|++ .|
T Consensus 192 ~Dva~~~~~~~~~---~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~l 265 (287)
T 3sc6_A 192 ADLNVMINKLIHT---SL--YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLR-LN 265 (287)
T ss_dssp HHHHHHHHHHHTS---CC--CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHH-HT
T ss_pred HHHHHHHHHHHhC---CC--CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHH-hh
Confidence 9999999999987 22 6899999999999999999999999987665433 233344556789999998 89
Q ss_pred CCcccccHHHHHHHHHHHHhhC
Q 040584 315 NWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 315 g~~p~~~~~~~i~~~~~~~~~~ 336 (347)
||.|.++++++|+++++|++.+
T Consensus 266 g~~p~~~~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 266 GFLQMPSWEEGLERFFIETKSH 287 (287)
T ss_dssp TCCCCCBHHHHHHHHHHHTC--
T ss_pred CCCCCccHHHHHHHHHHHHhcC
Confidence 9999999999999999998754
No 32
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=100.00 E-value=3.6e-46 Score=335.25 Aligned_cols=306 Identities=17% Similarity=0.213 Sum_probs=238.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|+|+||||||+||||++|+++|+++ |++|++++|+...... . .++.++.+|+.|.+++.+++++.+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~-----------~~~~~~~~D~~d~~~~~~~~~~~~ 68 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV-V-----------NSGPFEVVNALDFNQIEHLVEVHK 68 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH-H-----------HSSCEEECCTTCHHHHHHHHHHTT
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc-c-----------CCCceEEecCCCHHHHHHHHhhcC
Confidence 8899999999999999999999999 8999999987665321 1 156789999999999999998556
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCC-CCCCCCCCCCCCCCchhhhH
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPK-VVPCTEEFPLQAMNPYGRSK 157 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~-~~~~~e~~~~~~~~~Y~~sK 157 (347)
+|+|||+||.... ....++...+++|+.++.+++++|++.++++||++||..+||... ..+.+|+.+..|.++|+.+|
T Consensus 69 ~d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK 147 (312)
T 2yy7_A 69 ITDIYLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISK 147 (312)
T ss_dssp CCEEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHH
T ss_pred CCEEEECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHH
Confidence 9999999996542 223566788999999999999999998899999999999998743 35678888888999999999
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
.++|.+++.++.+. +++++++||+++|||...+. . .....+...+.+...+. .+..++ ++++.++|+
T Consensus 148 ~~~e~~~~~~~~~~-~~~~~~lrp~~v~g~~~~~~-~---~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i 214 (312)
T 2yy7_A 148 QAGERWCEYYHNIY-GVDVRSIRYPGLISWSTPPG-G---GTTDYAVDIFYKAIADK--KYECFL------SSETKMPMM 214 (312)
T ss_dssp HHHHHHHHHHHHHH-CCEEECEEECEEECSSSCCC-S---CTTTHHHHHHHHHHHTS--EEEESS------CTTCCEEEE
T ss_pred HHHHHHHHHHHHhc-CCcEEEEeCCeEecCCCCCC-C---chhhhHHHHHHHHHcCC--CeEEec------CCCceeeee
Confidence 99999999988775 89999999999999742111 0 11122444444433333 244445 678899999
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCC---CchhhccChHHHHHhc
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPG---DAEIVYASTEKAEREL 314 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~d~~k~~~~l 314 (347)
|++|+|+++..++++.......+++||+++ +.+|+.|+++.+.+.+|. ..+...+.... ......+|++|+++.|
T Consensus 215 ~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~l 292 (312)
T 2yy7_A 215 YMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFRQKIADSWPASIDDSQAREDW 292 (312)
T ss_dssp EHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTHHHHHTTSCSSBCCHHHHHHH
T ss_pred eHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCccccccccccccCCHHHHHHHc
Confidence 999999999999987211001248999986 789999999999999983 22222221110 0112467999999999
Q ss_pred CCcccccHHHHHHHHHHHHh
Q 040584 315 NWKAKYGIDEMCRDQWNWAS 334 (347)
Q Consensus 315 g~~p~~~~~~~i~~~~~~~~ 334 (347)
||+|+++++++|+++++||+
T Consensus 293 G~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 293 DWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp CCCCCCCHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHhC
Confidence 99999999999999999985
No 33
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=8.3e-46 Score=341.02 Aligned_cols=317 Identities=21% Similarity=0.257 Sum_probs=243.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhH-HHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASE-IAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
||+||||||+||||++++++|+++|++|++++|+..... ...+.+.........++.++.+|++|.+++.+++++.++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999998754311 1111111000001247888999999999999999854589
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCC---CeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC---KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSK 157 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK 157 (347)
+|||+||........+++...+++|+.++.+++++|++.++ ++||++||..+||.....+++|+.+..|.+.|+.+|
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK 160 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence 99999997655445566777889999999999999999887 799999999999987777889999988999999999
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
.++|.+++.++.++ +++++++|++++|||.. ........+..++..+..|.... ..+| ++++.++|+
T Consensus 161 ~~~e~~~~~~~~~~-~~~~~~~r~~~~~gp~~-----~~~~~~~~~~~~~~~~~~g~~~~-~~~g------~~~~~~~~i 227 (372)
T 1db3_A 161 LYAYWITVNYRESY-GMYACNGILFNHESPRR-----GETFVTRKITRAIANIAQGLESC-LYLG------NMDSLRDWG 227 (372)
T ss_dssp HHHHHHHHHHHHHH-CCCEEEEEECCEECTTS-----CTTSHHHHHHHHHHHHHTTSCCC-EEES------CTTCEECCE
T ss_pred HHHHHHHHHHHHHh-CCCeEEEEECCccCCCC-----CCcchhhHHHHHHHHHHcCCCCc-eeec------CCCceeeee
Confidence 99999999998775 89999999999999842 11100111233455556665332 3345 678999999
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCccc-------------------------
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVK------------------------- 292 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~------------------------- 292 (347)
|++|+|++++.++++ + .+++||+++++++|+.|+++.+++.+|.+.++..
T Consensus 228 ~v~Dva~a~~~~~~~---~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1db3_A 228 HAKDYVKMQWMMLQQ---E--QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDV 302 (372)
T ss_dssp EHHHHHHHHHHTTSS---S--SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCE
T ss_pred EHHHHHHHHHHHHhc---C--CCceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence 999999999988875 1 1389999999999999999999999997543210
Q ss_pred ----CC--CCCCCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhC
Q 040584 293 ----SG--RRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 293 ----~~--~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
.+ .++.......+|++|+++.|||+|+++++++|+++++||+++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 352 (372)
T 1db3_A 303 IIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352 (372)
T ss_dssp EEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred eeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence 01 122333456689999999999999999999999999999775
No 34
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=100.00 E-value=1.7e-45 Score=335.31 Aligned_cols=314 Identities=22% Similarity=0.264 Sum_probs=248.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++|++|++++|+...... ..+..+. ...++.++.+|++|.+++.+++++.++|+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG--IENDVKIIHMDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT--CTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc--ccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence 4899999999999999999999999999999998765321 1122221 12468889999999999999998545799
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCC-CeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC-KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
|||+||......+.+++...+++|+.++.+++++|++.++ ++||++||..+||.....+++|+.+..+.++|+.+|.++
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 158 (345)
T 2z1m_A 79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFG 158 (345)
T ss_dssp EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHH
Confidence 9999997643334566778999999999999999998886 799999999999988777889999988999999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
|.+++.++.++ +++++++|++++|||+. ........+..++.++..+.... ..+| ++.+.++++|++
T Consensus 159 e~~~~~~~~~~-~~~~~~~r~~~~~gpg~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~v~ 225 (345)
T 2z1m_A 159 HWITVNYREAY-NMFACSGILFNHESPLR-----GIEFVTRKITYSLARIKYGLQDK-LVLG------NLNAKRDWGYAP 225 (345)
T ss_dssp HHHHHHHHHHH-CCCEEEEEECCEECTTS-----CTTSHHHHHHHHHHHHHTTSCSC-EEES------CTTCEECCEEHH
T ss_pred HHHHHHHHHHh-CCceEeeeeeeecCCCC-----CCcchhHHHHHHHHHHHcCCCCe-eeeC------CCCceeeeEEHH
Confidence 99999998876 88999999999999842 11111111222344555554322 2334 577889999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcc-------------------cC--CCCCCC
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV-------------------KS--GRRPGD 299 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~-------------------~~--~~~~~~ 299 (347)
|+|+++..++++. .+++||+++++++|+.|+++.+++.+|.+.++. .. ..++..
T Consensus 226 Dva~a~~~~~~~~-----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 2z1m_A 226 EYVEAMWLMMQQP-----EPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAE 300 (345)
T ss_dssp HHHHHHHHHHTSS-----SCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSC
T ss_pred HHHHHHHHHHhCC-----CCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCC
Confidence 9999999999761 137999999999999999999999999874321 00 012223
Q ss_pred chhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 300 AEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 300 ~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
.....+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 301 ~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 338 (345)
T 2z1m_A 301 VDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRV 338 (345)
T ss_dssp CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred cceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHh
Confidence 34556799999999999999999999999999998764
No 35
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=100.00 E-value=5.6e-45 Score=339.13 Aligned_cols=324 Identities=24% Similarity=0.267 Sum_probs=244.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHH-------------HHHHHHhhccCCCCeEEEecCCCCHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIA-------------VAKVKELAGYQGNNMTFHKLDLRDKA 68 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~Dl~d~~ 68 (347)
+++||||||+||||++|+++|+++|++|++++|........ .+.+..+......++.++.+|++|.+
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~ 90 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 90 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence 47999999999999999999999999999998864321100 11111111111357889999999999
Q ss_pred HHHHHHccCCCcEEEEccccccCCccccCcc---hhhhhhhhHHHHHHHHHHHcCC-CeEEEeccccccCCCCCCCCCCC
Q 040584 69 ALEVVFAGTKFDAVIHFAGLKAVGESVQKPL---PYFDNNLTGTITLLEVMAAHGC-KNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 69 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~---~~~~~nv~~~~~l~~~~~~~~~-~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++.+++++.++|+|||+||.........++. ..+++|+.++.+++++|++.++ ++||++||.++||... .+++|+
T Consensus 91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~ 169 (404)
T 1i24_A 91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEG 169 (404)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSS
T ss_pred HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcc
Confidence 9999998445999999999754322233332 4789999999999999999887 5999999999998654 456665
Q ss_pred --------------CCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCC--------CCCCC-CC
Q 040584 145 --------------FPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGE--------DPRGI-PN 201 (347)
Q Consensus 145 --------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--------~~~~~-~~ 201 (347)
.+..+.++|+.+|.++|.+++.++.++ +++++++||++||||.....+. ...+. ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 248 (404)
T 1i24_A 170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 248 (404)
T ss_dssp EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc-CCeEEEEecceeeCCCCCccccccccccccccccchhh
Confidence 366788999999999999999988776 8999999999999995321100 00111 12
Q ss_pred ccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCC--eeEEccCCCcccHHHHHHH
Q 040584 202 NLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGC--EVYNLGTGKGTSVLEMVAA 279 (347)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~--~~~nv~~~~~~s~~e~~~~ 279 (347)
.+..++.++..+. .+.++| ++++.++|+|++|+|++++.++++ +...+ ++||+++ +++|+.|+++.
T Consensus 249 ~~~~~~~~~~~g~--~~~~~g------~g~~~~~~i~v~Dva~a~~~~l~~---~~~~g~~~~yni~~-~~~s~~e~~~~ 316 (404)
T 1i24_A 249 ALNRFCVQAAVGH--PLTVYG------KGGQTRGYLDIRDTVQCVEIAIAN---PAKAGEFRVFNQFT-EQFSVNELASL 316 (404)
T ss_dssp HHHHHHHHHHHTC--CEEEET------TSCCEEEEEEHHHHHHHHHHHHHS---CCCTTCEEEEEECS-EEEEHHHHHHH
T ss_pred HHHHHHHHHHcCC--eeEEeC------CCCceECcEEHHHHHHHHHHHHhC---cccCCCceEEEECC-CCCcHHHHHHH
Confidence 2445677777765 345556 678999999999999999999987 22334 7999987 88999999999
Q ss_pred HHHH---hCCCCCcccCCCCCC--CchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCCCCC
Q 040584 280 FEKA---SGKKIPLVKSGRRPG--DAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 340 (347)
Q Consensus 280 i~~~---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~~~ 340 (347)
+++. +|.+.++...+.... ......+|++|++ .|||+|+++++++++++++|++.++..+
T Consensus 317 i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~~ 381 (404)
T 1i24_A 317 VTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDRV 381 (404)
T ss_dssp HHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGGC
T ss_pred HHHHHHhhCCCccccccCcccCccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhcc
Confidence 9998 787766544443222 2234567999997 6999999999999999999998765443
No 36
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=100.00 E-value=1.5e-45 Score=338.00 Aligned_cols=306 Identities=25% Similarity=0.386 Sum_probs=245.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCc--hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDN--ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|+||||||+||||++|+++|+++ |++|++++|... .... +..+. ...++.++.+|++|.+++.++++..++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES----LSDIS--ESNRYNFEHADICDSAEITRIFEQYQP 74 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG----GTTTT--TCTTEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh----hhhhh--cCCCeEEEECCCCCHHHHHHHHhhcCC
Confidence 47999999999999999999998 799999998652 1111 11111 134788999999999999999974459
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc--CCC-------eEEEeccccccCCCCC--C--------C
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH--GCK-------NLVFSSSATAYGWPKV--V--------P 140 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~-------~iv~~SS~~~yg~~~~--~--------~ 140 (347)
|+|||+||......+.+++...+++|+.++.+++++|++. +++ +||++||..+||.... . +
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~ 154 (361)
T 1kew_A 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL 154 (361)
T ss_dssp SEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCC
Confidence 9999999976433344567889999999999999999988 876 9999999999986532 1 7
Q ss_pred CCCCCCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceE
Q 040584 141 CTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALT 219 (347)
Q Consensus 141 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 219 (347)
++|+.+..+.+.|+.+|.++|.+++.++.++ +++++++||++||||.. .. ..+. .++.++..+. .+.
T Consensus 155 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~vrp~~v~G~~~-----~~----~~~~~~~~~~~~~~~--~~~ 222 (361)
T 1kew_A 155 FTETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYH-----FP----EKLIPLVILNALEGK--PLP 222 (361)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTC-----CT----TSHHHHHHHHHHHTC--CEE
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCcEEEEeeceeECCCC-----Cc----ccHHHHHHHHHHcCC--Cce
Confidence 8898888899999999999999999998876 89999999999999842 11 1233 3566666665 355
Q ss_pred EecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCc--------c
Q 040584 220 VFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL--------V 291 (347)
Q Consensus 220 ~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~--------~ 291 (347)
++| ++.+.++++|++|+|++++.+++. ...+++||+++++++|+.|+++.+++.+|.+.+. .
T Consensus 223 ~~~------~~~~~~~~i~v~Dva~a~~~~~~~----~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~ 292 (361)
T 1kew_A 223 IYG------KGDQIRDWLYVEDHARALHMVVTE----GKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQIT 292 (361)
T ss_dssp EET------TSCCEEEEEEHHHHHHHHHHHHHH----CCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEE
T ss_pred EcC------CCceeEeeEEHHHHHHHHHHHHhC----CCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccccccccee
Confidence 556 678899999999999999999987 2456899999999999999999999999865431 1
Q ss_pred cCCCCCCCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhC
Q 040584 292 KSGRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 292 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
..+.++.......+|++|+++.|||+|+++++++|+++++||+++
T Consensus 293 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 293 YVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp EECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred ecCCCCcccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 122222233456789999999999999999999999999999876
No 37
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=100.00 E-value=8.7e-46 Score=342.03 Aligned_cols=313 Identities=20% Similarity=0.187 Sum_probs=243.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh-----HHHHHHHHHhhccCCC-CeEEEecCCCCHHHHHHHH
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS-----EIAVAKVKELAGYQGN-NMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~ 74 (347)
|+|+||||||+||||++|+++|+++|++|++++|+.... ........ .... ++.++.+|+.|.+++.+++
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~ 102 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH----NVNKALMKLHYADLTDASSLRRWI 102 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC------------CCEEEEECCTTCHHHHHHHH
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccc----cccccceEEEECCCCCHHHHHHHH
Confidence 457999999999999999999999999999999876531 11000000 0012 6888999999999999999
Q ss_pred ccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-----eEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 75 AGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-----NLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-----~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
+..++|+|||+||......+.+++...+++|+.++.+++++|++.+++ +||++||..+||.... +++|+.+..|
T Consensus 103 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~ 181 (381)
T 1n7h_A 103 DVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHP 181 (381)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCC
T ss_pred HhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCC
Confidence 854579999999976543334567788999999999999999987654 9999999999998766 8899999899
Q ss_pred CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
.+.|+.+|.++|.+++.++.++ +++++++|++++|||.. ........+..++.++..+.... ..+| +
T Consensus 182 ~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~r~~~~~gp~~-----~~~~~~~~~~~~~~~~~~g~~~~-~~~g------~ 248 (381)
T 1n7h_A 182 RSPYAASKCAAHWYTVNYREAY-GLFACNGILFNHESPRR-----GENFVTRKITRALGRIKVGLQTK-LFLG------N 248 (381)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTS-----CTTSHHHHHHHHHHHHHHTSCCC-EEES------C
T ss_pred CCchHHHHHHHHHHHHHHHHHh-CCcEEEEEeCceeCCCC-----CCcchhHHHHHHHHHHHcCCCCe-EEeC------C
Confidence 9999999999999999998775 88999999999999842 11100011233455555665332 2344 6
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC--cccC--CCCCCCchhhcc
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP--LVKS--GRRPGDAEIVYA 305 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~--~~~~--~~~~~~~~~~~~ 305 (347)
+++.++|+|++|+|++++.+++.. .+++||+++++++|+.|+++.+.+.+|.+.+ +... ..++.......+
T Consensus 249 ~~~~~~~v~v~Dva~a~~~~~~~~-----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 323 (381)
T 1n7h_A 249 LQASRDWGFAGDYVEAMWLMLQQE-----KPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQG 323 (381)
T ss_dssp TTCEEECEEHHHHHHHHHHHHTSS-----SCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCB
T ss_pred CCceeeeEEHHHHHHHHHHHHhCC-----CCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccC
Confidence 788999999999999999999762 1389999999999999999999999997642 1111 122333455678
Q ss_pred ChHHHHHhcCCcccccHHHHHHHHHHHHhhC
Q 040584 306 STEKAERELNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 306 d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
|++|+++.|||+|+++++++|+++++||.++
T Consensus 324 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 324 DASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp CCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999775
No 38
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.1e-44 Score=327.92 Aligned_cols=293 Identities=17% Similarity=0.192 Sum_probs=231.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++|++|++++|+....... . ..+++++.+|+.|.+++.++++ ++|+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~------~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 80 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A------YLEPECRVAEMLDHAGLERALR--GLDG 80 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G------GGCCEEEECCTTCHHHHHHHTT--TCSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c------cCCeEEEEecCCCHHHHHHHHc--CCCE
Confidence 46999999999999999999999999999999987654211 1 1267899999999999999998 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCC--CCCCCCCCCCC----CCchhh
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKV--VPCTEEFPLQA----MNPYGR 155 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~--~~~~e~~~~~~----~~~Y~~ 155 (347)
|||+||... ...+++...+++|+.++.+++++|++.++++||++||..+|+.... .+ +|+.+..| .+.|+.
T Consensus 81 vih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~ 157 (342)
T 2x4g_A 81 VIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVL 157 (342)
T ss_dssp EEEC--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHH
T ss_pred EEECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHH
Confidence 999999654 2345677899999999999999999999999999999999987554 44 88888888 899999
Q ss_pred hHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeee
Q 040584 156 SKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235 (347)
Q Consensus 156 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 235 (347)
+|.++|.+++.+++. +++++++||+++|||... . .. +..++.++..+....+ | ++.++
T Consensus 158 sK~~~e~~~~~~~~~--g~~~~ilrp~~v~g~~~~----~----~~-~~~~~~~~~~~~~~~~---~--------~~~~~ 215 (342)
T 2x4g_A 158 CKWALDEQAREQARN--GLPVVIGIPGMVLGELDI----G----PT-TGRVITAIGNGEMTHY---V--------AGQRN 215 (342)
T ss_dssp HHHHHHHHHHHHHHT--TCCEEEEEECEEECSCCS----S----CS-TTHHHHHHHTTCCCEE---E--------CCEEE
T ss_pred HHHHHHHHHHHHhhc--CCcEEEEeCCceECCCCc----c----cc-HHHHHHHHHcCCCccc---c--------CCCcc
Confidence 999999999998764 899999999999998420 1 01 3345666666653322 3 56789
Q ss_pred eeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCC-------------------
Q 040584 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR------------------- 296 (347)
Q Consensus 236 ~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------------- 296 (347)
++|++|+|+++..++++. .. +++||+++++ +|+.|+++.+.+.+|.+.++ ..+..
T Consensus 216 ~i~v~Dva~~~~~~~~~~---~~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 289 (342)
T 2x4g_A 216 VIDAAEAGRGLLMALERG---RI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQL 289 (342)
T ss_dssp EEEHHHHHHHHHHHHHHS---CT-TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC--------
T ss_pred eeeHHHHHHHHHHHHhCC---CC-CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCC
Confidence 999999999999999872 23 6899999999 99999999999999987654 22210
Q ss_pred ----CC----CchhhccChHHHHHhcCC-cccccHHHHHHHHHHHHhhCCC
Q 040584 297 ----PG----DAEIVYASTEKAERELNW-KAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 297 ----~~----~~~~~~~d~~k~~~~lg~-~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
+. ......+|++|+++.||| +| ++++++++++++||+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~ 339 (342)
T 2x4g_A 290 PLLDETAIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGY 339 (342)
T ss_dssp --------CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCC
Confidence 00 023566899999999999 99 7999999999999998865
No 39
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=100.00 E-value=6.3e-45 Score=331.59 Aligned_cols=302 Identities=24% Similarity=0.398 Sum_probs=241.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|||||||||||++|+++|+++|++|++++|........ +..+. ...++.++.+|+.+.. +. ++|+
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~~D~~~~~-----~~--~~d~ 94 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWI--GHENFELINHDVVEPL-----YI--EVDQ 94 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGT--TCTTEEEEECCTTSCC-----CC--CCSE
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---hhhhc--cCCceEEEeCccCChh-----hc--CCCE
Confidence 47899999999999999999999999999999865432111 11111 1346889999998753 34 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCC-----CCCCCCCchhhh
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEE-----FPLQAMNPYGRS 156 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~-----~~~~~~~~Y~~s 156 (347)
|||+||.........++...+++|+.++.+++++|++.++ +||++||..+||.....+++|+ .+..+.+.|+.+
T Consensus 95 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~s 173 (343)
T 2b69_A 95 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEG 173 (343)
T ss_dssp EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHH
T ss_pred EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHH
Confidence 9999997543333456678899999999999999999886 9999999999998776777777 456677889999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeee
Q 040584 157 KLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDY 236 (347)
Q Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 236 (347)
|.++|.+++.++++. +++++++||+++|||... ... ...+..++.++..+. .+.++| ++++.++|
T Consensus 174 K~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~~~-----~~~-~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~ 238 (343)
T 2b69_A 174 KRVAETMCYAYMKQE-GVEVRVARIFNTFGPRMH-----MND-GRVVSNFILQALQGE--PLTVYG------SGSQTRAF 238 (343)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCC-----TTC-CCHHHHHHHHHHHTC--CEEEES------SSCCEEEC
T ss_pred HHHHHHHHHHHHHHh-CCcEEEEEEcceeCcCCC-----CCc-ccHHHHHHHHHHcCC--CceEcC------CCCeEEee
Confidence 999999999988775 899999999999998421 110 112334566666665 345556 67889999
Q ss_pred eeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCC
Q 040584 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNW 316 (347)
Q Consensus 237 i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~ 316 (347)
+|++|+|++++.+++. + .+++||+++++++|+.|+++.+++.+|.+.++...+..........+|++|+++.|||
T Consensus 239 v~v~Dva~a~~~~~~~---~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~ 313 (343)
T 2b69_A 239 QYVSDLVNGLVALMNS---N--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 313 (343)
T ss_dssp EEHHHHHHHHHHHHTS---S--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCC
T ss_pred EeHHHHHHHHHHHHhc---C--CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCC
Confidence 9999999999988875 1 2579999999999999999999999998876655554444455677899999999999
Q ss_pred cccccHHHHHHHHHHHHhhC
Q 040584 317 KAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 317 ~p~~~~~~~i~~~~~~~~~~ 336 (347)
+|+++++++|+++++||+++
T Consensus 314 ~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 314 EPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp CCCSCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999875
No 40
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=100.00 E-value=1.5e-45 Score=327.25 Aligned_cols=280 Identities=14% Similarity=0.089 Sum_probs=230.1
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
++|+||||| +||||++|+++|+++|++|+++.|+.... ..+++++.+|+.|.+.+.++++. ++|
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d 65 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------------PAGVQTLIADVTRPDTLASIVHL-RPE 65 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------------CTTCCEEECCTTCGGGCTTGGGG-CCS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------ccCCceEEccCCChHHHHHhhcC-CCC
Confidence 147999999 59999999999999999999999986642 34788999999999999999884 499
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+||... .++...+++|+.++.+++++|++.++++|||+||..+||.....+++|+.+..|.+.|+.+|.++
T Consensus 66 ~vih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 140 (286)
T 3gpi_A 66 ILVYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEA 140 (286)
T ss_dssp EEEECHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence 9999998642 35567889999999999999999889999999999999998888899999999999999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
|.+ +.+ ++++++||+++|||.. . .++.++.. + .. .+ ++++.++|+|++
T Consensus 141 E~~-~~~------~~~~ilR~~~v~G~~~-----------~---~~~~~~~~-~-~~---~~------~~~~~~~~i~v~ 188 (286)
T 3gpi_A 141 EAL-LAA------YSSTILRFSGIYGPGR-----------L---RMIRQAQT-P-EQ---WP------ARNAWTNRIHRD 188 (286)
T ss_dssp HHH-GGG------SSEEEEEECEEEBTTB-----------C---HHHHHTTC-G-GG---SC------SSBCEECEEEHH
T ss_pred HHH-Hhc------CCeEEEecccccCCCc-----------h---hHHHHHHh-c-cc---CC------CcCceeEEEEHH
Confidence 998 542 7899999999999841 1 23344333 1 11 12 678899999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCcccc
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAKY 320 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 320 (347)
|+|+++..++++.. ....+++||+++++++|+.|+++.+++.+|.+.++...+ .......+|++|++ .|||+|++
T Consensus 189 Dva~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---~~~~~~~~d~~k~~-~lG~~p~~ 263 (286)
T 3gpi_A 189 DGAAFIAYLIQQRS-HAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP---PVQGNKKLSNARLL-ASGYQLIY 263 (286)
T ss_dssp HHHHHHHHHHHHHT-TSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC---CBCSSCEECCHHHH-HTTCCCSS
T ss_pred HHHHHHHHHHhhhc-cCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc---ccCCCeEeeHHHHH-HcCCCCcC
Confidence 99999999998832 135579999999999999999999999999887655433 34567789999997 89999999
Q ss_pred -cHHHHHHHHHHHHhhCCC
Q 040584 321 -GIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 321 -~~~~~i~~~~~~~~~~~~ 338 (347)
+++++|+++++|+..+..
T Consensus 264 ~~l~e~l~~~~~~~~~~~~ 282 (286)
T 3gpi_A 264 PDYVSGYGALLAAMREGHH 282 (286)
T ss_dssp CSHHHHHHHHHHHHTC---
T ss_pred CcHHHHHHHHHHHHhcccc
Confidence 799999999999987643
No 41
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=100.00 E-value=9.3e-45 Score=326.58 Aligned_cols=294 Identities=17% Similarity=0.107 Sum_probs=206.2
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+|||||||||||++|+++|+++|++|++++|+... ++ ++.+|++|.+++.+++++.++|
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------------~~--~~~~Dl~d~~~~~~~~~~~~~d 62 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------------PK--FEQVNLLDSNAVHHIIHDFQPH 62 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------CHHHHHHHCCS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------------CC--eEEecCCCHHHHHHHHHhhCCC
Confidence 88999999999999999999999999999999876432 02 5678999999999988754589
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+||......+..++...+++|+.++.+++++|++.++ +||++||..+|+. ...+++|+.+..|.+.|+.+|.++
T Consensus 63 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~ 140 (315)
T 2ydy_A 63 VIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDG 140 (315)
T ss_dssp EEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHH
T ss_pred EEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999997654444567788999999999999999999887 9999999999987 567789999888999999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHH-cCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA-VGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
|.+++.+ +.+++++||+.||||.... . ...+..++..+. .+. .+.+ .+++.++++|+
T Consensus 141 e~~~~~~-----~~~~~~lR~~~v~G~~~~~-----~--~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~i~v 198 (315)
T 2ydy_A 141 EKAVLEN-----NLGAAVLRIPILYGEVEKL-----E--ESAVTVMFDKVQFSNK--SANM--------DHWQQRFPTHV 198 (315)
T ss_dssp HHHHHHH-----CTTCEEEEECSEECSCSSG-----G--GSTTGGGHHHHHCCSS--CEEE--------ECSSBBCCEEH
T ss_pred HHHHHHh-----CCCeEEEeeeeeeCCCCcc-----c--ccHHHHHHHHHHhcCC--Ceee--------ccCceECcEEH
Confidence 9999886 3467999999999984210 0 011222344444 443 2332 24577899999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC-cccCCC----CCCCchhhccChHHHHHhc
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP-LVKSGR----RPGDAEIVYASTEKAEREL 314 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~----~~~~~~~~~~d~~k~~~~l 314 (347)
+|+|++++.++++.......+++||+++++++|+.|+++.+.+.+|.+.+ +...+. .........+|++|+++.
T Consensus 199 ~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~- 277 (315)
T 2ydy_A 199 KDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETL- 277 (315)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHT-
T ss_pred HHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhc-
Confidence 99999999998863111245699999999999999999999999998754 222221 122334677899999988
Q ss_pred CCcccccHHHHHHHHHHHHhhCC
Q 040584 315 NWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 315 g~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
||+|.++++++|+++++||++++
T Consensus 278 G~~p~~~~~~~l~~~~~~~~~~~ 300 (315)
T 2ydy_A 278 GIGQRTPFRIGIKESLWPFLIDK 300 (315)
T ss_dssp TCCCCCCHHHHHHHHHGGGCC--
T ss_pred CCCCCCCHHHHHHHHHHHHccch
Confidence 99999999999999999999884
No 42
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=100.00 E-value=8e-44 Score=317.08 Aligned_cols=274 Identities=17% Similarity=0.153 Sum_probs=227.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+|||||||||||++|+++|+++|++|++++|+ .+|+.|.+++.+++++.++|+|
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------------~~Dl~d~~~~~~~~~~~~~d~v 67 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------------DLDITNVLAVNKFFNEKKPNVV 67 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------------cCCCCCHHHHHHHHHhcCCCEE
Confidence 789999999999999999999999999999874 2699999999999974459999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEE 162 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 162 (347)
||+||........+++...+++|+.++.+++++|++.++ +||++||..+||.....+++|+.+..|.+.|+.+|.++|.
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~ 146 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN 146 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 999997543333456778999999999999999999888 9999999999998777789999998999999999999999
Q ss_pred HHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 163 ICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
+++.+. .+++++||+.+|||. . .+.. ++..+..+. .+.+. +++.++++|++|
T Consensus 147 ~~~~~~-----~~~~~lR~~~v~G~~-~-----------~~~~~~~~~~~~~~--~~~~~--------~~~~~~~i~v~D 199 (292)
T 1vl0_A 147 FVKALN-----PKYYIVRTAWLYGDG-N-----------NFVKTMINLGKTHD--ELKVV--------HDQVGTPTSTVD 199 (292)
T ss_dssp HHHHHC-----SSEEEEEECSEESSS-S-----------CHHHHHHHHHHHCS--EEEEE--------SSCEECCEEHHH
T ss_pred HHHhhC-----CCeEEEeeeeeeCCC-c-----------ChHHHHHHHHhcCC--cEEee--------cCeeeCCccHHH
Confidence 998864 358999999999972 1 1333 445555543 33333 357889999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCC-----CCCCchhhccChHHHHHhcCC
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR-----RPGDAEIVYASTEKAERELNW 316 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lg~ 316 (347)
+|++++.+++. + .+++||+++++++|+.|+++.+.+.+|.+.++...+. .........+|++|+++.|||
T Consensus 200 va~~~~~~~~~---~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 274 (292)
T 1vl0_A 200 LARVVLKVIDE---K--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGD 274 (292)
T ss_dssp HHHHHHHHHHH---T--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCC
T ss_pred HHHHHHHHHhc---C--CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCC
Confidence 99999999988 2 5699999999999999999999999998765433221 122344677999999999999
Q ss_pred cccccHHHHHHHHHHHHhh
Q 040584 317 KAKYGIDEMCRDQWNWASK 335 (347)
Q Consensus 317 ~p~~~~~~~i~~~~~~~~~ 335 (347)
+|+ +++++|+++++||++
T Consensus 275 ~p~-~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 275 ITR-EWKESLKEYIDLLQM 292 (292)
T ss_dssp CCC-BHHHHHHHHHHHHTC
T ss_pred CCC-CHHHHHHHHHHHhcC
Confidence 999 999999999999863
No 43
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=5.9e-44 Score=320.43 Aligned_cols=298 Identities=23% Similarity=0.302 Sum_probs=221.0
Q ss_pred eEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---CC
Q 040584 4 NILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---KF 79 (347)
Q Consensus 4 ~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~ 79 (347)
+||||||+||||++|+++|+++| ++|++++|....... ..+. ++. +.+|+.|.+.+.+++++. ++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~--------~~~-~~~d~~~~~~~~~~~~~~~~~~~ 69 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLV--------DLN-IADYMDKEDFLIQIMAGEEFGDV 69 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHHH--------TSC-CSEEEEHHHHHHHHHTTCCCSSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhcC--------cce-eccccccHHHHHHHHhccccCCC
Confidence 58999999999999999999999 999999987664311 1111 222 678999999999988731 49
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|+|||+||.... ...++...+++|+.++.+++++|++.++ +||++||..+||.....+++|+.+..|.++|+.+|.+
T Consensus 70 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~ 146 (310)
T 1eq2_A 70 EAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFL 146 (310)
T ss_dssp CEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHH
T ss_pred cEEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 999999997543 3456778899999999999999999999 9999999999998777788999988999999999999
Q ss_pred HHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCCce-eeeee
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDGTV-VRDYI 237 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i 237 (347)
+|.+++.++.+. +++++++||+++|||...+ ......+. .++.++..+.. +.++| ++++ .++|+
T Consensus 147 ~e~~~~~~~~~~-g~~~~~lrp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~------~g~~~~~~~i 212 (310)
T 1eq2_A 147 FDEYVRQILPEA-NSQIVGFRYFNVYGPREGH-----KGSMASVAFHLNTQLNNGES--PKLFE------GSENFKRDFV 212 (310)
T ss_dssp HHHHHHHHGGGC-SSCEEEEEECEEESSSCGG-----GGGGSCHHHHHHHHHHC---------------------CBCEE
T ss_pred HHHHHHHHHHHc-CCCEEEEeCCcEECcCCCC-----CCccchHHHHHHHHHHcCCC--cEEec------CCCcceEccE
Confidence 999999998775 8999999999999984211 00011233 35666666553 33344 5778 89999
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCC----CCchhhccChHHHHHh
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP----GDAEIVYASTEKAERE 313 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~d~~k~~~~ 313 (347)
|++|+|++++.++++ +. +++||+++++++|+.|+++.+.+.+|.+ .+...+... .......+|++|+++
T Consensus 213 ~v~Dva~~~~~~~~~---~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (310)
T 1eq2_A 213 YVGDVADVNLWFLEN---GV--SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA- 285 (310)
T ss_dssp EHHHHHHHHHHHHHH---CC--CEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHH-
T ss_pred EHHHHHHHHHHHHhc---CC--CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhcccccccccchHHHHh-
Confidence 999999999999987 22 6999999999999999999999999976 222222111 112345689999976
Q ss_pred cCC-cccccHHHHHHHHHHHHhhC
Q 040584 314 LNW-KAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 314 lg~-~p~~~~~~~i~~~~~~~~~~ 336 (347)
||| .|.++++++|+++++||+++
T Consensus 286 lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 286 AGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp TTCCCCCCCHHHHHHHHHHHTC--
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhc
Confidence 899 78889999999999999754
No 44
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=100.00 E-value=2.2e-43 Score=323.19 Aligned_cols=299 Identities=23% Similarity=0.301 Sum_probs=237.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---C
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---K 78 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~ 78 (347)
|+||||||+||||++|+++|+++| ++|++++|+...... ..+ .++. +.+|+.|.+.+.++++.. +
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-----~~~-----~~~~-~~~d~~~~~~~~~~~~~~~~~~ 115 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VNL-----VDLN-IADYMDKEDFLIQIMAGEEFGD 115 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG-----GGT-----TTSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh-----hcc-----cCce-EeeecCcHHHHHHHHhhcccCC
Confidence 789999999999999999999999 999999987654210 111 1233 678999999999988731 4
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHH
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
+|+|||+||.... ...++...+++|+.++.+++++|++.++ +||++||..+||.....+++|+.+..|.+.|+.+|.
T Consensus 116 ~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~ 192 (357)
T 2x6t_A 116 VEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKF 192 (357)
T ss_dssp CCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHH
T ss_pred CCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHH
Confidence 9999999997543 3456678899999999999999999888 999999999999877778999999899999999999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCCce-eeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDGTV-VRDY 236 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~ 236 (347)
++|.+++.++.+. +++++++||++||||.... ......+. .++..+..+.. +.++| ++++ .++|
T Consensus 193 ~~E~~~~~~~~~~-g~~~~ilRp~~v~Gp~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~ 258 (357)
T 2x6t_A 193 LFDEYVRQILPEA-NSQIVGFRYFNVYGPREGH-----KGSMASVAFHLNTQLNNGES--PKLFE------GSENFKRDF 258 (357)
T ss_dssp HHHHHHHHHGGGC-SSCEEEEEECEEESSSCTT-----CGGGSCHHHHHHHHHHTTCC--CEEET------TGGGCEECE
T ss_pred HHHHHHHHHHHHc-CCCEEEEecCeEECCCCCC-----CcccchHHHHHHHHHHcCCC--cEEeC------CCCcceEcc
Confidence 9999999998775 8999999999999984211 11111233 35666666653 34455 6778 8999
Q ss_pred eeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCC----CCchhhccChHHHHH
Q 040584 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP----GDAEIVYASTEKAER 312 (347)
Q Consensus 237 i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~d~~k~~~ 312 (347)
+|++|+|++++.+++. +. +++||+++++++|+.|+++.+.+.+|.+ .+...+... .......+|++|+++
T Consensus 259 i~v~Dva~ai~~~~~~---~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 332 (357)
T 2x6t_A 259 VYVGDVADVNLWFLEN---GV--SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA 332 (357)
T ss_dssp EEHHHHHHHHHHHHHH---CC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTTSCCSBCCCCCHHHHH
T ss_pred EEHHHHHHHHHHHHhc---CC--CCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcccccccccccccCHHHHHH
Confidence 9999999999999987 22 6999999999999999999999999987 322222111 112346689999976
Q ss_pred hcCC-cccccHHHHHHHHHHHHhhC
Q 040584 313 ELNW-KAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 313 ~lg~-~p~~~~~~~i~~~~~~~~~~ 336 (347)
||| .|..+++++|+++++||+++
T Consensus 333 -lG~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 333 -AGYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp -TTCCCCCCCHHHHHHHHHHHHC--
T ss_pred -cCCCCCCCCHHHHHHHHHHHHhhc
Confidence 899 78889999999999999753
No 45
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=100.00 E-value=3e-44 Score=320.82 Aligned_cols=284 Identities=18% Similarity=0.112 Sum_probs=230.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+||||||+||||++|+++|+ +||+|++++|+.. .+.+|+.|.+++.+++++.++|+|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------------~~~~D~~d~~~~~~~~~~~~~d~v 58 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------------EFCGDFSNPKGVAETVRKLRPDVI 58 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------------SSCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------------cccccCCCHHHHHHHHHhcCCCEE
Confidence 589999999999999999999 8999999988641 246899999999999984459999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEE 162 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 162 (347)
||+||.........++...+++|+.++.+++++|++.++ ||||+||..+||.....+++|+.+..|.+.|+.+|.++|.
T Consensus 59 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 137 (299)
T 1n2s_A 59 VNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK 137 (299)
T ss_dssp EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHH
T ss_pred EECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 999997654334567788999999999999999998887 8999999999998777789999999999999999999999
Q ss_pred HHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 163 ICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
+++.+. .+++++||+++|||.. ..+.+ ++..+..+. .+.++| ++.++++|++|
T Consensus 138 ~~~~~~-----~~~~ilRp~~v~G~~~-----------~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~i~v~D 191 (299)
T 1n2s_A 138 ALQDNC-----PKHLIFRTSWVYAGKG-----------NNFAKTMLRLAKERQ--TLSVIN--------DQYGAPTGAEL 191 (299)
T ss_dssp HHHHHC-----SSEEEEEECSEECSSS-----------CCHHHHHHHHHHHCS--EEEEEC--------SCEECCEEHHH
T ss_pred HHHHhC-----CCeEEEeeeeecCCCc-----------CcHHHHHHHHHhcCC--CEEeec--------CcccCCeeHHH
Confidence 998864 2789999999999841 12333 555555554 344433 47899999999
Q ss_pred HHHHHHHHHHhcCCCCC-CCeeEEccCCCcccHHHHHHHHHHHhCCCC------CcccCCC-----CCCCchhhccChHH
Q 040584 242 LADGHIAALRKLDDPKV-GCEVYNLGTGKGTSVLEMVAAFEKASGKKI------PLVKSGR-----RPGDAEIVYASTEK 309 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~-~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~------~~~~~~~-----~~~~~~~~~~d~~k 309 (347)
+|+++..++++... .. .+++||+++++++|+.|+++.+.+.+|.+. .+...+. .........+|++|
T Consensus 192 va~~~~~~~~~~~~-~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 270 (299)
T 1n2s_A 192 LADCTAHAIRVALN-KPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEK 270 (299)
T ss_dssp HHHHHHHHHHHHHH-CGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHH
T ss_pred HHHHHHHHHHHhcc-ccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHH
Confidence 99999999987210 12 368999999999999999999999998652 2222211 11224567789999
Q ss_pred HHHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 310 AERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 310 ~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
+++.|||+|+ +++++|+++++||+++.
T Consensus 271 ~~~~lG~~p~-~~~~~l~~~~~~~~~~~ 297 (299)
T 1n2s_A 271 FQRNFDLILP-QWELGVKRMLTEMFTTT 297 (299)
T ss_dssp HHHHHTCCCC-BHHHHHHHHHHHHHSCC
T ss_pred HHHhcCCCCC-CHHHHHHHHHHHHHhcC
Confidence 9999999999 89999999999998764
No 46
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=100.00 E-value=1.5e-43 Score=320.87 Aligned_cols=292 Identities=22% Similarity=0.297 Sum_probs=231.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++|++|++++|+........+ . -.++.++.+|++|.+++.++++..++|+
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~-----l~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---P-----VAGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC---S-----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh---c-----cCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 4799999999999999999999999999999986543221000 0 1368899999999999999997445999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCC--CCCCCCCCCCCCchhhhHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVV--PCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~--~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|||+||..... +.+++. +++|+.++.+++++|++.++++||++||..+||..... +++|+. .+.+.|+.+|.+
T Consensus 92 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~ 166 (330)
T 2pzm_A 92 VVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTA 166 (330)
T ss_dssp EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHH
T ss_pred EEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHH
Confidence 99999976432 222333 89999999999999999888999999999999875544 777776 677899999999
Q ss_pred HHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
+|.+++.+ +++++++||+++|||+ . . ...+..++.++..+. . .++ ++. .++++|+
T Consensus 167 ~e~~~~~~-----~~~~~~iR~~~v~gp~-----~-~---~~~~~~~~~~~~~~~-~---~~~------~~~-~~~~i~~ 221 (330)
T 2pzm_A 167 GEAFLMMS-----DVPVVSLRLANVTGPR-----L-A---IGPIPTFYKRLKAGQ-K---CFC------SDT-VRDFLDM 221 (330)
T ss_dssp HHHHHHTC-----SSCEEEEEECEEECTT-----C-C---SSHHHHHHHHHHTTC-C---CCE------ESC-EECEEEH
T ss_pred HHHHHHHc-----CCCEEEEeeeeeECcC-----C-C---CCHHHHHHHHHHcCC-E---EeC------CCC-EecceeH
Confidence 99998764 7789999999999984 1 1 112233555555554 2 222 455 8899999
Q ss_pred HHHHH-HHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHH-----HHh
Q 040584 240 VDLAD-GHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKA-----ERE 313 (347)
Q Consensus 240 ~D~a~-a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~-----~~~ 313 (347)
+|+|+ +++.+++. +. +++||+++++++|+.|+++.+++.+|.+ ++...+..+ ......+|++|+ ++
T Consensus 222 ~Dva~~a~~~~~~~---~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-~~~~~~~d~~k~~~~~l~~- 293 (330)
T 2pzm_A 222 SDFLAIADLSLQEG---RP--TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA-PGADDVPSVVLDPSKTETE- 293 (330)
T ss_dssp HHHHHHHHHHTSTT---CC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC-CCTTSCSEECBCCHHHHHH-
T ss_pred HHHHHHHHHHHhhc---CC--CCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc-chhhccCCHHHHhhchHHH-
Confidence 99999 99988876 22 7999999999999999999999999987 444433332 345667888888 77
Q ss_pred cCCcccccHHHHHHHHHHHHhhCCCC
Q 040584 314 LNWKAKYGIDEMCRDQWNWASKNPYG 339 (347)
Q Consensus 314 lg~~p~~~~~~~i~~~~~~~~~~~~~ 339 (347)
|||+|+++++++|+++++||+++++.
T Consensus 294 lG~~p~~~~~~~l~~~~~~~~~~~~~ 319 (330)
T 2pzm_A 294 FGWKAKVDFKDTITGQLAWYDKYGVT 319 (330)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred cCCcccCCHHHHHHHHHHHHHhhCcc
Confidence 99999999999999999999987543
No 47
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=100.00 E-value=4.2e-43 Score=316.01 Aligned_cols=304 Identities=15% Similarity=0.174 Sum_probs=235.0
Q ss_pred eEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 4 NILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 4 ~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+||||||+||||++|+++|+++ |++|++++|+..... ++.++.+|+.|.+++.++++..++|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------------~~~~~~~D~~d~~~~~~~~~~~~~d~ 65 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------------GIKFITLDVSNRDEIDRAVEKYSIDA 65 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------------TCCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------------CceEEEecCCCHHHHHHHHhhcCCcE
Confidence 5899999999999999999998 899999988754321 45688999999999999997556999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCC-CCCCCCCCCCCCCCCchhhhHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWP-KVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~-~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
|||+|+.... ....++...+++|+.++.+++++|++.++++||++||..+||.. ...+.+|+.+..|.+.|+.+|.++
T Consensus 66 vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 144 (317)
T 3ajr_A 66 IFHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAA 144 (317)
T ss_dssp EEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHH
T ss_pred EEECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHH
Confidence 9999996532 22346678899999999999999999999999999999999864 345677888888999999999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
|.+++.++++. +++++++||+++||+..... . .....+...+.+...+. .+..++ ++++.++|+|++
T Consensus 145 e~~~~~~~~~~-~~~~~~lR~~~~~g~~~~~~-~---~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~ 211 (317)
T 3ajr_A 145 ELLGQYYYEKF-GLDVRSLRYPGIISYKAEPT-A---GTTDYAVEIFYYAVKRE--KYKCYL------APNRALPMMYMP 211 (317)
T ss_dssp HHHHHHHHHHH-CCEEEEEEECEEECSSSCCC-S---CSSTHHHHHHHHHHTTC--CEEECS------CTTCCEEEEEHH
T ss_pred HHHHHHHHHhc-CCeEEEEecCcEeccCCCCC-C---cchhHHHHHHHHHHhCC--Cceeec------CccceeeeeEHH
Confidence 99999887775 89999999999999742111 0 11122344444444333 234444 567889999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCC---CchhhccChHHHHHhcCCc
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPG---DAEIVYASTEKAERELNWK 317 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~d~~k~~~~lg~~ 317 (347)
|+|++++.++++.......+++||+++ +.+|+.|+++.+.+.+|. ..+...+.... ......+|++|+++.|||+
T Consensus 212 Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 289 (317)
T 3ajr_A 212 DALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKIAATWPESLDSSEASNEWGFS 289 (317)
T ss_dssp HHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhhccccccccCHHHHHHHcCCC
Confidence 999999999986221111358999985 579999999999999883 22222221000 0112357999999999999
Q ss_pred ccccHHHHHHHHHHHHhhCCC
Q 040584 318 AKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 318 p~~~~~~~i~~~~~~~~~~~~ 338 (347)
|+++++++|+++++|++++..
T Consensus 290 p~~~~~~~l~~~~~~~~~~~~ 310 (317)
T 3ajr_A 290 IEYDLDRTIDDMIDHISEKLG 310 (317)
T ss_dssp CCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999987644
No 48
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=100.00 E-value=1.6e-42 Score=314.44 Aligned_cols=288 Identities=20% Similarity=0.232 Sum_probs=227.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+||||||+||||++|+++|+++|++|++++|+....... +.. -.++.++.+|++|.+++.+++++.++|+
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD-----HPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC-----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh-----cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 58999999999999999999999999999999875432110 000 1368899999999999999998434999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccC----CCCCCCCCCCCCCCCC-Cchhhh
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYG----WPKVVPCTEEFPLQAM-NPYGRS 156 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg----~~~~~~~~e~~~~~~~-~~Y~~s 156 (347)
|||+||..... ...++. +++|+.++.+++++|++.++++||++||..+|| .... +++|+. .|. +.|+.+
T Consensus 93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~s 166 (333)
T 2q1w_A 93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAIS 166 (333)
T ss_dssp EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHH
T ss_pred EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHH
Confidence 99999976532 222333 899999999999999998889999999999998 5444 777776 666 899999
Q ss_pred HHHHHHHHHH-HhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceee
Q 040584 157 KLFIEEICRD-VHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVR 234 (347)
Q Consensus 157 K~~~e~~~~~-~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 234 (347)
|.++|.+++. ++ +++++||+++|||. . . ..+.+ ++..+..+. . +. + +++.+
T Consensus 167 K~~~E~~~~~s~~------~~~ilR~~~v~gp~-----~-~----~~~~~~~~~~~~~~~-~-~~--~-------~~~~~ 219 (333)
T 2q1w_A 167 KSANEDYLEYSGL------DFVTFRLANVVGPR-----N-V----SGPLPIFFQRLSEGK-K-CF--V-------TKARR 219 (333)
T ss_dssp HHHHHHHHHHHTC------CEEEEEESEEESTT-----C-C----SSHHHHHHHHHHTTC-C-CE--E-------EECEE
T ss_pred HHHHHHHHHhhhC------CeEEEeeceEECcC-----C-c----CcHHHHHHHHHHcCC-e-ee--C-------CCceE
Confidence 9999999987 53 68999999999983 1 0 12333 555665554 2 21 1 35678
Q ss_pred eeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCC----CCchhhccChHHH
Q 040584 235 DYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP----GDAEIVYASTEKA 310 (347)
Q Consensus 235 ~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~d~~k~ 310 (347)
+++|++|+|++++.+++. +. +++||+++++.+|+.|+++.+.+.+|.+ ++...+..+ .......+|++|+
T Consensus 220 ~~i~v~Dva~ai~~~~~~---~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~ 293 (333)
T 2q1w_A 220 DFVFVKDLARATVRAVDG---VG--HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTI 293 (333)
T ss_dssp CEEEHHHHHHHHHHHHTT---CC--CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHH
T ss_pred eeEEHHHHHHHHHHHHhc---CC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHH
Confidence 999999999999999986 22 7999999999999999999999999987 433322111 1124677899999
Q ss_pred HHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 311 ERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 311 ~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
++. ||+|.++++++|+++++||++++
T Consensus 294 ~~~-G~~p~~~~~~~l~~~~~~~~~~~ 319 (333)
T 2q1w_A 294 QDF-GKIEFTPLKETVAAAVAYFREYG 319 (333)
T ss_dssp HHH-CCCCCCCHHHHHHHHHHHHHHHC
T ss_pred Hhc-CCCcCCCHHHHHHHHHHHHHHHC
Confidence 998 99999999999999999998764
No 49
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=100.00 E-value=7.8e-43 Score=309.75 Aligned_cols=269 Identities=16% Similarity=0.158 Sum_probs=215.1
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||+|||||| ||||++|+++|+++||+|+++.|++....... ..+++++.+|+.|.+ +. ++|
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~D~~d~~-----~~--~~d 65 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----------ASGAEPLLWPGEEPS-----LD--GVT 65 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----------HTTEEEEESSSSCCC-----CT--TCC
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----------hCCCeEEEecccccc-----cC--CCC
Confidence 7899999998 99999999999999999999999876543322 137899999999844 44 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHH--cCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA--HGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
+|||+|+..... ...+.++++++++ .++++|||+||..+||.....+++|+.+..|.+.|+.+|.
T Consensus 66 ~vi~~a~~~~~~-------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 132 (286)
T 3ius_A 66 HLLISTAPDSGG-------------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRV 132 (286)
T ss_dssp EEEECCCCBTTB-------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHH
T ss_pred EEEECCCccccc-------------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHH
Confidence 999999865321 1235688999988 6789999999999999888888999999999999999999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 238 (347)
++|++++.+ .+++++++||+++|||.... +.++..+.. ..+. .+.+.++|+|
T Consensus 133 ~~E~~~~~~----~~~~~~ilRp~~v~G~~~~~---------------~~~~~~~~~--~~~~-------~~~~~~~~i~ 184 (286)
T 3ius_A 133 MAEQQWQAV----PNLPLHVFRLAGIYGPGRGP---------------FSKLGKGGI--RRII-------KPGQVFSRIH 184 (286)
T ss_dssp HHHHHHHHS----TTCCEEEEEECEEEBTTBSS---------------STTSSSSCC--CEEE-------CTTCCBCEEE
T ss_pred HHHHHHHhh----cCCCEEEEeccceECCCchH---------------HHHHhcCCc--cccC-------CCCcccceEE
Confidence 999999886 38999999999999984221 112233432 2332 3467899999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccC--CCCCCC------chhhccChHHH
Q 040584 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKS--GRRPGD------AEIVYASTEKA 310 (347)
Q Consensus 239 v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~--~~~~~~------~~~~~~d~~k~ 310 (347)
++|+|+++..++++ + ..+++||+++++++|+.|+++.+.+.+|.+.+.... ...... .....+|++|+
T Consensus 185 v~Dva~a~~~~~~~---~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 260 (286)
T 3ius_A 185 VEDIAQVLAASMAR---P-DPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRI 260 (286)
T ss_dssp HHHHHHHHHHHHHS---C-CTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHH
T ss_pred HHHHHHHHHHHHhC---C-CCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHH
Confidence 99999999999987 2 256899999999999999999999999987653221 111111 14566899999
Q ss_pred HHhcCCcccc-cHHHHHHHHHHH
Q 040584 311 ERELNWKAKY-GIDEMCRDQWNW 332 (347)
Q Consensus 311 ~~~lg~~p~~-~~~~~i~~~~~~ 332 (347)
++.|||+|++ +++++|+++++.
T Consensus 261 ~~~lG~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 261 KEELGVRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp HHTTCCCCSCSSHHHHHHHHHHT
T ss_pred HHHhCCCCCcCCHHHHHHHHHHh
Confidence 9999999999 799999999874
No 50
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=5.8e-43 Score=344.39 Aligned_cols=319 Identities=17% Similarity=0.244 Sum_probs=245.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHH-HHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAA-LEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~ 79 (347)
+|+|||||||||||++|+++|+++ |++|++++|+........ ...++.++.+|++|.++ +.++++ ++
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~---------~~~~v~~v~~Dl~d~~~~~~~~~~--~~ 383 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---------NHPHFHFVEGDISIHSEWIEYHVK--KC 383 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT---------TCTTEEEEECCTTTCHHHHHHHHH--HC
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc---------cCCceEEEECCCCCcHHHHHHhhc--CC
Confidence 478999999999999999999998 899999999865432110 13478899999998765 777887 59
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCC-------CCCCc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPL-------QAMNP 152 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~-------~~~~~ 152 (347)
|+|||+||.........++...+++|+.++.+++++|++.+ ++||++||..+||.....+++|+++. .|.+.
T Consensus 384 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~ 462 (660)
T 1z7e_A 384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI 462 (660)
T ss_dssp SEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHH
T ss_pred CEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCC
Confidence 99999999765433445677889999999999999999988 89999999999998777778887652 45668
Q ss_pred hhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCce
Q 040584 153 YGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTV 232 (347)
Q Consensus 153 Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 232 (347)
|+.+|.++|.+++.++++. +++++++||+++|||..........+....+..++.++..+. .+.++| ++++
T Consensus 463 Y~~sK~~~E~~~~~~~~~~-gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~g------~g~~ 533 (660)
T 1z7e_A 463 YSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS--PIKLID------GGKQ 533 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTC--CEEEEG------GGCC
T ss_pred cHHHHHHHHHHHHHHHHHc-CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCC--CcEEeC------CCCe
Confidence 9999999999999988775 899999999999998532100000000112334666666665 345555 5788
Q ss_pred eeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC-cccHHHHHHHHHHHhCCCCCcccCCCC---------------
Q 040584 233 VRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK-GTSVLEMVAAFEKASGKKIPLVKSGRR--------------- 296 (347)
Q Consensus 233 ~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------- 296 (347)
.++|+|++|+|++++.++++.. ....+++||+++++ ++|+.|+++.+.+.+|.+......+..
T Consensus 534 ~~~~i~v~Dva~ai~~~l~~~~-~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~ 612 (660)
T 1z7e_A 534 KRCFTDIRDGIEALYRIIENAG-NRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG 612 (660)
T ss_dssp EEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTT
T ss_pred EEEEEEHHHHHHHHHHHHhCcc-ccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhcccccccc
Confidence 9999999999999999998621 11356899999886 899999999999999865432221211
Q ss_pred CCCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCCCCCCC
Q 040584 297 PGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYES 342 (347)
Q Consensus 297 ~~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~~~~~ 342 (347)
........+|++|+++.|||+|+++++++|+++++||+++..-.+.
T Consensus 613 ~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~~~~ 658 (660)
T 1z7e_A 613 YQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDK 658 (660)
T ss_dssp CCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCCC--
T ss_pred ccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcccccC
Confidence 0123456789999999999999999999999999999988543333
No 51
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.4e-42 Score=313.38 Aligned_cols=306 Identities=17% Similarity=0.164 Sum_probs=235.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC-------CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG-------YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
+|+||||||+||||++|+++|+++| ++|++++|....... ....++.++.+|++|.+++.+++
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----------~~~~~~~~~~~Dl~d~~~~~~~~ 83 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----------GFSGAVDARAADLSAPGEAEKLV 83 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----------ccCCceeEEEcCCCCHHHHHHHH
Confidence 4789999999999999999999999 899999987653211 01346788999999999999998
Q ss_pred ccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-----CCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 75 AGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-----CKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
+. ++|+|||+||.... ...+++...+++|+.++.+++++|++.+ +++||++||..+||.....+++|+++..+
T Consensus 84 ~~-~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~ 161 (342)
T 2hrz_A 84 EA-RPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTP 161 (342)
T ss_dssp HT-CCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCC
T ss_pred hc-CCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCC
Confidence 53 69999999997542 2345677889999999999999999876 78999999999998766678899999889
Q ss_pred CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccC-CCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVG-AHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
.++|+.+|.++|.++++++.+. +++.+++|++.+|| |+ .........+..++.....+.. ..+++
T Consensus 162 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~ir~~~v~g~pg-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~------ 227 (342)
T 2hrz_A 162 LTSYGTQKAICELLLSDYSRRG-FFDGIGIRLPTICIRPG-----KPNAAASGFFSNILREPLVGQE--AVLPV------ 227 (342)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTT-SCEEEEEEECEETTCCS-----SCCCSGGGHHHHHHHHHHTTCC--EEECS------
T ss_pred cchHHHHHHHHHHHHHHHHHhc-CCCceeEEeeeEEecCC-----CCcchhHHHHHHHHHHHhcCCC--eeccC------
Confidence 9999999999999999988764 78999999999999 52 1111111122335566666653 23333
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCC--cccCCCCCC-C---chh
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIP--LVKSGRRPG-D---AEI 302 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~-~---~~~ 302 (347)
.+...++++|++|+|++++.+++........+++||++ ++.+|+.|+++.+.+.+|.+.+ +...+.... . ...
T Consensus 228 ~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 306 (342)
T 2hrz_A 228 PESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWA 306 (342)
T ss_dssp CTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSC
T ss_pred CCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccc
Confidence 34667889999999999999998621000145899995 5789999999999999996542 222221100 0 011
Q ss_pred hccChHHHHHhcCCcccccHHHHHHHHHHHHhh
Q 040584 303 VYASTEKAERELNWKAKYGIDEMCRDQWNWASK 335 (347)
Q Consensus 303 ~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~ 335 (347)
..+|++|+++ |||+|+++++++|+++++|++.
T Consensus 307 ~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~~ 338 (342)
T 2hrz_A 307 PGFEAKRARE-LGFTAESSFEEIIQVHIEDELG 338 (342)
T ss_dssp CCBCCHHHHH-TTCCCCSSHHHHHHHHHHHHST
T ss_pred cccChHHHHH-cCCCCCCCHHHHHHHHHHHhcC
Confidence 2479999998 9999999999999999999973
No 52
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=100.00 E-value=6.3e-42 Score=311.12 Aligned_cols=312 Identities=20% Similarity=0.228 Sum_probs=214.0
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+||||||+||||++|+++|+++||+|+++.|+....... ..+..+. ...+++++.+|++|.+++.++++ ++|
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~-~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--~~D 82 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKV-SHLLELQ--ELGDLKIFRADLTDELSFEAPIA--GCD 82 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTT-HHHHHHG--GGSCEEEEECCTTTSSSSHHHHT--TCS
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhH-HHHHhcC--CCCcEEEEecCCCChHHHHHHHc--CCC
Confidence 568999999999999999999999999999988875532110 1111111 12468889999999999999998 699
Q ss_pred EEEEccccccCCccccCc-chhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccc-cCCC---CCCCCCCCCCC-------
Q 040584 81 AVIHFAGLKAVGESVQKP-LPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATA-YGWP---KVVPCTEEFPL------- 147 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~-yg~~---~~~~~~e~~~~------- 147 (347)
+|||+|+.... ...++ ...+++|+.++.+++++|++.+ ++|||++||..+ |+.. ...+++|+.+.
T Consensus 83 ~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 160 (338)
T 2rh8_A 83 FVFHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTS 160 (338)
T ss_dssp EEEEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-----
T ss_pred EEEEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccc
Confidence 99999986532 22233 3488999999999999999985 899999999874 4321 11367776532
Q ss_pred -CC-CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 -QA-MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 -~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+ .++|+.||.++|.+++.+++++ +++++++||+++|||... .. .. .....+.....|....+.... ..
T Consensus 161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~Gp~~~-----~~-~~-~~~~~~~~~~~g~~~~~~~~~-~~ 231 (338)
T 2rh8_A 161 AKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPTLMAGSSLT-----SD-VP-SSIGLAMSLITGNEFLINGMK-GM 231 (338)
T ss_dssp --CCCCCCTTSCCHHHHHHHHHHHHH-TCCEEEEEECEEESCCSS-----SS-CC-HHHHHHHHHHHTCHHHHHHHH-HH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCC-----CC-CC-chHHHHHHHHcCCcccccccc-cc
Confidence 11 2369999999999999987664 899999999999998421 11 11 112222222333211110000 00
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCC-CCCcccCCCCCCCchhhc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGK-KIPLVKSGRRPGDAEIVY 304 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~ 304 (347)
..+...++|+|++|+|++++.++++ + ..++.||+++ ..+|+.|+++.+.+.++. +.+....+. +.. ....
T Consensus 232 --~~~~~~~~~i~v~Dva~a~~~~~~~---~-~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~~~~~-~~~-~~~~ 302 (338)
T 2rh8_A 232 --QMLSGSVSIAHVEDVCRAHIFVAEK---E-SASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTDFGDF-PPK-SKLI 302 (338)
T ss_dssp --HHHHSSEEEEEHHHHHHHHHHHHHC---T-TCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCCCTTS-CSS-CSCC
T ss_pred --ccccCcccEEEHHHHHHHHHHHHcC---C-CcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCCCCCC-CcC-ccee
Confidence 0001234899999999999999876 2 2246788865 469999999999998762 332222111 111 1267
Q ss_pred cChHHHHHhcCCcccccHHHHHHHHHHHHhhCCC
Q 040584 305 ASTEKAERELNWKAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 305 ~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
+|++|+ +.|||+|+++++++|+++++||+++.+
T Consensus 303 ~d~~k~-~~lG~~p~~~l~~gl~~~~~~~~~~~~ 335 (338)
T 2rh8_A 303 ISSEKL-VKEGFSFKYGIEEIYDESVEYFKAKGL 335 (338)
T ss_dssp CCCHHH-HHHTCCCSCCHHHHHHHHHHHHHHTTC
T ss_pred echHHH-HHhCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 899999 669999999999999999999998753
No 53
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=100.00 E-value=1.8e-41 Score=308.35 Aligned_cols=305 Identities=18% Similarity=0.160 Sum_probs=227.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEE-ecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH-KLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+||||||+||||++|+++|+++|++|++++|+........+.+... ...++.++ .+|++|.+++.++++ ++|
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~--~~d 85 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK---YPGRFETAVVEDMLKQGAYDEVIK--GAA 85 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---STTTEEEEECSCTTSTTTTTTTTT--TCS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc---CCCceEEEEecCCcChHHHHHHHc--CCC
Confidence 479999999999999999999999999999998765443333322221 12468888 899999999998887 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHH-cCCCeEEEeccccccCCCCC----CCCCCCC----------
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA-HGCKNLVFSSSATAYGWPKV----VPCTEEF---------- 145 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~iv~~SS~~~yg~~~~----~~~~e~~---------- 145 (347)
+|||+||..... .++...+++|+.++.+++++|++ .++++||++||..+|+.... .+++|++
T Consensus 86 ~vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 162 (342)
T 1y1p_A 86 GVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK 162 (342)
T ss_dssp EEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHH
T ss_pred EEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhc
Confidence 999999976432 45677899999999999999985 56889999999999864321 4667765
Q ss_pred ------CCCCCCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCce
Q 040584 146 ------PLQAMNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPAL 218 (347)
Q Consensus 146 ------~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (347)
+..+.+.|+.+|.++|.+++.+++++ .+++++++||+++|||..... .....+..++.++..++...
T Consensus 163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~- 236 (342)
T 1y1p_A 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPE-----TQSGSTSGWMMSLFNGEVSP- 236 (342)
T ss_dssp HSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTT-----TCCCHHHHHHHHHHTTCCCH-
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCC-----CCCccHHHHHHHHHcCCCcc-
Confidence 23456789999999999999988764 378899999999999843211 00012444677777765432
Q ss_pred EEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCC
Q 040584 219 TVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPG 298 (347)
Q Consensus 219 ~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 298 (347)
+++ ++ +.++|+|++|+|++++.+++. +...++.+. ++++.+|+.|+++.+.+.+|.. .+.. +....
T Consensus 237 -~~~------~~-~~~~~v~v~Dva~a~~~~~~~---~~~~g~~~~-~~g~~~s~~e~~~~i~~~~~~~-~~~~-~~~~~ 302 (342)
T 1y1p_A 237 -ALA------LM-PPQYYVSAVDIGLLHLGCLVL---PQIERRRVY-GTAGTFDWNTVLATFRKLYPSK-TFPA-DFPDQ 302 (342)
T ss_dssp -HHH------TC-CSEEEEEHHHHHHHHHHHHHC---TTCCSCEEE-ECCEEECHHHHHHHHHHHCTTS-CCCC-CCCCC
T ss_pred -ccc------cC-CcCCEeEHHHHHHHHHHHHcC---cccCCceEE-EeCCCCCHHHHHHHHHHHCCCc-cCCC-CCCcc
Confidence 223 23 678999999999999999986 223344443 4567899999999999999964 2111 11111
Q ss_pred CchhhccChHHHHHhcCC---cccccHHHHHHHHHHHHh
Q 040584 299 DAEIVYASTEKAERELNW---KAKYGIDEMCRDQWNWAS 334 (347)
Q Consensus 299 ~~~~~~~d~~k~~~~lg~---~p~~~~~~~i~~~~~~~~ 334 (347)
......+|++|+++.||| .+..+++++|+++++||+
T Consensus 303 ~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 303 GQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp CCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred ccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 123467899999998887 455699999999999875
No 54
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=100.00 E-value=7.4e-41 Score=303.98 Aligned_cols=303 Identities=19% Similarity=0.251 Sum_probs=216.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+||||||+||||++|+++|+++||+|+++.|+....... ..+..+.. ...+++++.+|++|.+++.++++ ++|+
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 80 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLPK-AETHLTLWKADLADEGSFDEAIK--GCTG 80 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHTSTT-HHHHEEEEECCTTSTTTTHHHHT--TCSE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHhccc-CCCeEEEEEcCCCCHHHHHHHHc--CCCE
Confidence 48999999999999999999999999999988876533211 11111100 01257889999999999999998 6999
Q ss_pred EEEccccccCCccccCc-chhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccc-cCCCC-CCCCCCCCCC---------C
Q 040584 82 VIHFAGLKAVGESVQKP-LPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATA-YGWPK-VVPCTEEFPL---------Q 148 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~-yg~~~-~~~~~e~~~~---------~ 148 (347)
|||+|+.... ...++ ...+++|+.++.+++++|++.+ ++|||++||..+ |+... ..+++|+.+. .
T Consensus 81 Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 158 (337)
T 2c29_D 81 VFHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKM 158 (337)
T ss_dssp EEECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCC
T ss_pred EEEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCC
Confidence 9999986521 22233 3588999999999999999887 899999999874 44322 2345666432 1
Q ss_pred CCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHH---HHcCCCCceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ---VAVGRRPALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~ 225 (347)
+.++|+.||.++|.+++.+++++ +++++++||++||||... .. +...+.. ...|....+ +
T Consensus 159 ~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~Gp~~~-----~~-----~~~~~~~~~~~~~g~~~~~---~--- 221 (337)
T 2c29_D 159 TAWMYFVSKTLAEQAAWKYAKEN-NIDFITIIPTLVVGPFIM-----SS-----MPPSLITALSPITGNEAHY---S--- 221 (337)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEECEEESCCSC-----SS-----CCHHHHHHTHHHHTCGGGH---H---
T ss_pred ccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCC-----CC-----CCchHHHHHHHHcCCCccc---c---
Confidence 44579999999999999887665 899999999999998421 11 1112211 123332111 1
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCC-CCCcccCCCCCCCchhhc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGK-KIPLVKSGRRPGDAEIVY 304 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~ 304 (347)
.+ ....|+|++|+|++++.+++. + ..++.|++++ ..+|+.|+++.+.+.++. +.+....+ .........
T Consensus 222 ---~~-~~~~~i~v~Dva~a~~~~~~~---~-~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~ 291 (337)
T 2c29_D 222 ---II-RQGQFVHLDDLCNAHIYLFEN---P-KAEGRYICSS-HDCIILDLAKMLREKYPEYNIPTEFKG-VDENLKSVC 291 (337)
T ss_dssp ---HH-TEEEEEEHHHHHHHHHHHHHC---T-TCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCCSCCTT-CCTTCCCCE
T ss_pred ---cc-CCCCEEEHHHHHHHHHHHhcC---c-ccCceEEEeC-CCCCHHHHHHHHHHHCCCccCCCCCCc-ccCCCcccc
Confidence 11 234599999999999999876 2 2246787654 568999999999998742 33322211 112234567
Q ss_pred cChHHHHHhcCCcccccHHHHHHHHHHHHhhCCC
Q 040584 305 ASTEKAERELNWKAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 305 ~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
+|++|+ +.|||+|+++++++|+++++|++++..
T Consensus 292 ~d~~k~-~~lG~~p~~~l~e~l~~~~~~~~~~~~ 324 (337)
T 2c29_D 292 FSSKKL-TDLGFEFKYSLEDMFTGAVDTCRAKGL 324 (337)
T ss_dssp ECCHHH-HHHTCCCCCCHHHHHHHHHHHHHHTTS
T ss_pred ccHHHH-HHcCCCcCCCHHHHHHHHHHHHHHcCC
Confidence 899999 789999999999999999999998754
No 55
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=100.00 E-value=8.2e-40 Score=300.05 Aligned_cols=298 Identities=16% Similarity=0.149 Sum_probs=230.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC-----CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG-----YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
+|+|||||||||||++|+++|+++| ++|++++|+..... . ...+++++.+|+.|.+++.+++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~---~~~~~~~~~~Dl~d~~~~~~~~~~ 69 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H---EDNPINYVQCDISDPDDSQAKLSP 69 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C---CSSCCEEEECCTTSHHHHHHHHTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c---ccCceEEEEeecCCHHHHHHHHhc
Confidence 4799999999999999999999999 99999999866432 0 134788999999999999999985
Q ss_pred CC-CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEE-------EeccccccCCC--CCCCCCCC
Q 040584 77 TK-FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLV-------FSSSATAYGWP--KVVPCTEE 144 (347)
Q Consensus 77 ~~-~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv-------~~SS~~~yg~~--~~~~~~e~ 144 (347)
.+ +|+|||+||... .++...+++|+.++.+++++|++. +++++| |+||..+||.. ...+++|+
T Consensus 70 ~~~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~ 144 (364)
T 2v6g_A 70 LTDVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTED 144 (364)
T ss_dssp CTTCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTT
T ss_pred CCCCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcc
Confidence 44 999999999652 356778999999999999999987 788998 89999999874 34678888
Q ss_pred CCCCC-CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHH--HHHH--HcCCCCceE
Q 040584 145 FPLQA-MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPF--VTQV--AVGRRPALT 219 (347)
Q Consensus 145 ~~~~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~ 219 (347)
.+..+ .+.| ..+|+++++++++.++++++++||+++|||... .....+.+. +..+ ..+. .+.
T Consensus 145 ~~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~-------~~~~~~~~~~~~~~~~~~~g~--~~~ 211 (364)
T 2v6g_A 145 LPRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPY-------SMMNLVGTLCVYAAICKHEGK--VLR 211 (364)
T ss_dssp SCCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTT-------CSSCHHHHHHHHHHHHHHHTC--CBC
T ss_pred ccCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCC-------cccchHHHHHHHHHHHHhcCC--cee
Confidence 77655 6677 468999998876652399999999999998532 111223332 2323 2444 233
Q ss_pred EecccCCCCCC---ceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcc--cCC
Q 040584 220 VFGTDYSTKDG---TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV--KSG 294 (347)
Q Consensus 220 ~~g~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~ 294 (347)
++| ++ ....+++|++|+|++++.++++ +...+++||+++++++|+.|+++.+++.+|.+.+.. ..|
T Consensus 212 ~~g------~~~~~~~~~~~~~v~Dva~a~~~~~~~---~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p 282 (364)
T 2v6g_A 212 FTG------CKAAWDGYSDCSDADLIAEHHIWAAVD---PYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVD 282 (364)
T ss_dssp CCS------CHHHHHSCBCCEEHHHHHHHHHHHHHC---GGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCC
T ss_pred cCC------CcccccccCCCCcHHHHHHHHHHHHhC---CCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 344 44 3457889999999999999986 223568999999999999999999999999775432 222
Q ss_pred CC----------------------CCCc--------------hh-hccChHHHHHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 295 RR----------------------PGDA--------------EI-VYASTEKAERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 295 ~~----------------------~~~~--------------~~-~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
.. +... .. ..+|++|+++ |||+|.++++++++++++||++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g 361 (364)
T 2v6g_A 283 LKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYK 361 (364)
T ss_dssp CCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcC
Confidence 11 1111 22 4789999988 999999999999999999999875
Q ss_pred C
Q 040584 338 Y 338 (347)
Q Consensus 338 ~ 338 (347)
+
T Consensus 362 ~ 362 (364)
T 2v6g_A 362 I 362 (364)
T ss_dssp S
T ss_pred C
Confidence 4
No 56
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=100.00 E-value=6.6e-40 Score=295.69 Aligned_cols=304 Identities=20% Similarity=0.263 Sum_probs=211.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC-CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN-LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+||||||+||||++|+++|+++||+|+++.| ++..... ...+..+.. ...++.++.+|++|.+++.++++ ++|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d 76 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSFLTNLPG-ASEKLHFFNADLSNPDSFAAAIE--GCV 76 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHHHHTSTT-HHHHEEECCCCTTCGGGGHHHHT--TCS
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHHHHhhhc-cCCceEEEecCCCCHHHHHHHHc--CCC
Confidence 478999999999999999999999999999887 4321000 001111100 01246788899999999999998 699
Q ss_pred EEEEccccccCCccccCc-chhhhhhhhHHHHHHHHHHHc-CCCeEEEecccccc-CCC-CCCCCCCCCCC--------C
Q 040584 81 AVIHFAGLKAVGESVQKP-LPYFDNNLTGTITLLEVMAAH-GCKNLVFSSSATAY-GWP-KVVPCTEEFPL--------Q 148 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~~y-g~~-~~~~~~e~~~~--------~ 148 (347)
+|||+|+... ....++ ..++++|+.++.+++++|++. ++++||++||..++ +.. ...+++|+.+. .
T Consensus 77 ~vih~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 154 (322)
T 2p4h_X 77 GIFHTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVK 154 (322)
T ss_dssp EEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHC
T ss_pred EEEEcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccC
Confidence 9999997532 222232 458999999999999999987 78899999998754 332 22355666532 2
Q ss_pred CCC-chhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 149 AMN-PYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 149 ~~~-~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
|.. .|+.||..+|.+++++++.. +++++++||+++|||... .. .. .....+.....+....+ +
T Consensus 155 p~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~lrp~~v~g~~~~-----~~-~~-~~~~~~~~~~~g~~~~~---~----- 218 (322)
T 2p4h_X 155 PFGWNYAVSKTLAEKAVLEFGEQN-GIDVVTLILPFIVGRFVC-----PK-LP-DSIEKALVLVLGKKEQI---G----- 218 (322)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEESCCCS-----SS-CC-HHHHHHTHHHHSCGGGC---C-----
T ss_pred cccccHHHHHHHHHHHHHHHHHhc-CCcEEEEcCCceECCCCC-----CC-CC-chHHHHHHHHhCCCccC---c-----
Confidence 233 69999999999999987764 899999999999998421 10 11 11222222234432111 1
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCC-CCCccc-CCCCCCCchhhcc
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGK-KIPLVK-SGRRPGDAEIVYA 305 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~-~~~~~~-~~~~~~~~~~~~~ 305 (347)
. ..++|+|++|+|++++.+++. +... +.|| ++++.+|+.|+++.+.+.++. +.+... ...... .....+
T Consensus 219 -~--~~~~~i~v~Dva~a~~~~~~~---~~~~-g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~ 289 (322)
T 2p4h_X 219 -V--TRFHMVHVDDVARAHIYLLEN---SVPG-GRYN-CSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKG-ARLPDL 289 (322)
T ss_dssp -E--EEEEEEEHHHHHHHHHHHHHS---CCCC-EEEE-CCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCC-EECCEE
T ss_pred -C--CCcCEEEHHHHHHHHHHHhhC---cCCC-CCEE-EcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCC-Ccceec
Confidence 2 334899999999999999976 2233 4599 567889999999999988752 222110 000111 145678
Q ss_pred ChHHHHHhcCCcccccHHHHHHHHHHHHhhCC
Q 040584 306 STEKAERELNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 306 d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
|++|+ +.|||+|+++++++|+++++|++++.
T Consensus 290 d~~k~-~~lG~~p~~~~~~~l~~~~~~~~~~~ 320 (322)
T 2p4h_X 290 NTKKL-VDAGFDFKYTIEDMFDDAIQCCKEKG 320 (322)
T ss_dssp CCHHH-HHTTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred ccHHH-HHhCCccCCCHHHHHHHHHHHHHhcC
Confidence 99999 66999999999999999999998753
No 57
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=287.58 Aligned_cols=277 Identities=16% Similarity=0.149 Sum_probs=208.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|||||||||||||++|+++|+++||+|+++.|++... . +..| +...+.++ ++|+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------------~---~~~~----~~~~~~l~--~~d~v 55 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------------R---ITWD----ELAASGLP--SCDAA 55 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------------E---EEHH----HHHHHCCC--SCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------------e---eecc----hhhHhhcc--CCCEE
Confidence 7899999999999999999999999999999975432 1 1122 22234455 69999
Q ss_pred EEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcCC--CeEEEeccccccCCCCCCCCCCCCCCCCCCchhhh
Q 040584 83 IHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHGC--KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRS 156 (347)
Q Consensus 83 ih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~s 156 (347)
||+|+...... +......+++.|+.++.+++++++..+. .++|+.||+++||.....+.+|++|..+.+.|+..
T Consensus 56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~ 135 (298)
T 4b4o_A 56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNL 135 (298)
T ss_dssp EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHH
T ss_pred EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHH
Confidence 99998542221 1223345788899999999999998764 36999999999999999999999999898889888
Q ss_pred HHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeee
Q 040584 157 KLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDY 236 (347)
Q Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 236 (347)
|...|.... ... .+++++++|++.||||.. ..+..++.....+... .+| ++++.++|
T Consensus 136 ~~~~e~~~~--~~~-~~~~~~~~r~~~v~g~~~-----------~~~~~~~~~~~~~~~~---~~g------~g~~~~~~ 192 (298)
T 4b4o_A 136 VTKWEAAAR--LPG-DSTRQVVVRSGVVLGRGG-----------GAMGHMLLPFRLGLGG---PIG------SGHQFFPW 192 (298)
T ss_dssp HHHHHHHHC--CSS-SSSEEEEEEECEEECTTS-----------HHHHHHHHHHHTTCCC---CBT------TSCSBCCE
T ss_pred HHHHHHHHH--hhc-cCCceeeeeeeeEEcCCC-----------CchhHHHHHHhcCCcc---eec------ccCceeec
Confidence 877776432 223 488999999999999831 1233455555555432 234 78999999
Q ss_pred eeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCC-----C-C-----chhhcc
Q 040584 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP-----G-D-----AEIVYA 305 (347)
Q Consensus 237 i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~-~-----~~~~~~ 305 (347)
||++|+++++..++++ + ...++||+++++++|+.|+++.+++.+|++..+ +.|... + . .....+
T Consensus 193 ihv~Dva~a~~~~~~~---~-~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~-pvP~~~~~~~~g~~~~~~~l~~~rv 267 (298)
T 4b4o_A 193 IHIGDLAGILTHALEA---N-HVHGVLNGVAPSSATNAEFAQTFGAALGRRAFI-PLPSAVVQAVFGRQRAIMLLEGQKV 267 (298)
T ss_dssp EEHHHHHHHHHHHHHC---T-TCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCC-CBCHHHHHHHHCHHHHHHHHCCCCB
T ss_pred CcHHHHHHHHHHHHhC---C-CCCCeEEEECCCccCHHHHHHHHHHHhCcCCcc-cCCHHHHHHHhcchhHHHhhCCCEE
Confidence 9999999999999987 2 344799999999999999999999999976532 222110 0 0 012346
Q ss_pred ChHHHHHhcCCcccc-cHHHHHHHHHHHH
Q 040584 306 STEKAERELNWKAKY-GIDEMCRDQWNWA 333 (347)
Q Consensus 306 d~~k~~~~lg~~p~~-~~~~~i~~~~~~~ 333 (347)
+++|++ .+||+++| +++++|+++++.+
T Consensus 268 ~~~kl~-~~Gf~f~yp~l~~al~~l~~~l 295 (298)
T 4b4o_A 268 IPRRTL-ATGYQYSFPELGAALKEIAENL 295 (298)
T ss_dssp CCHHHH-HTTCCCSCCSHHHHHHHHHHCC
T ss_pred cHHHHH-HCCCCCCCCCHHHHHHHHHHhh
Confidence 788985 58999998 7999999998743
No 58
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.5e-38 Score=280.13 Aligned_cols=266 Identities=17% Similarity=0.134 Sum_probs=212.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+|+||||+||||++++++|++ |++|++++|+.... .+ +.+|++|.+++.+++++.++|+|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---------------~~---~~~Dl~~~~~~~~~~~~~~~d~v 61 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---------------GG---YKLDLTDFPRLEDFIIKKRPDVI 61 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---------------TC---EECCTTSHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---------------CC---ceeccCCHHHHHHHHHhcCCCEE
Confidence 4799999999999999999994 89999999876421 12 78999999999999985459999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEE 162 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 162 (347)
||+||........+++...+++|+.++.+++++|++.+. +||++||..+|+.... +++|+.+..|.+.|+.+|.++|.
T Consensus 62 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~ 139 (273)
T 2ggs_A 62 INAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGET 139 (273)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHH
T ss_pred EECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHH
Confidence 999997654333456778999999999999999998876 9999999999976543 78888888888999999999999
Q ss_pred HHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 163 ICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
+++. ++++++||+.+||+. .+.. ++.....+. .+.+++ + .++++|++|
T Consensus 140 ~~~~-------~~~~~iR~~~v~G~~-------------~~~~~~~~~~~~~~--~~~~~~--------~-~~~~~~~~d 188 (273)
T 2ggs_A 140 FALQ-------DDSLIIRTSGIFRNK-------------GFPIYVYKTLKEGK--TVFAFK--------G-YYSPISARK 188 (273)
T ss_dssp HHCC-------TTCEEEEECCCBSSS-------------SHHHHHHHHHHTTC--CEEEES--------C-EECCCBHHH
T ss_pred HHhC-------CCeEEEecccccccc-------------HHHHHHHHHHHcCC--CEEeec--------C-CCCceEHHH
Confidence 8865 457999999999831 2333 334444544 233333 2 789999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccC----CCCCCCchhhccChHHHHHhcCCc
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKS----GRRPGDAEIVYASTEKAERELNWK 317 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~----~~~~~~~~~~~~d~~k~~~~lg~~ 317 (347)
+|+++..++++. . +++||+++ +.+|+.|+++.+.+.+|.+.++... ...+.......+|++|+++.|||+
T Consensus 189 va~~i~~~~~~~----~-~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 262 (273)
T 2ggs_A 189 LASAILELLELR----K-TGIIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTD 262 (273)
T ss_dssp HHHHHHHHHHHT----C-CEEEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSC
T ss_pred HHHHHHHHHhcC----c-CCeEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCC
Confidence 999999999872 2 46999998 9999999999999999988654321 112233456789999999999999
Q ss_pred c-cccHHHHH
Q 040584 318 A-KYGIDEMC 326 (347)
Q Consensus 318 p-~~~~~~~i 326 (347)
| .+++++++
T Consensus 263 p~~~~l~~~~ 272 (273)
T 2ggs_A 263 FYTLDLDGMV 272 (273)
T ss_dssp CCSCCGGGCC
T ss_pred CCCccccccc
Confidence 9 67888765
No 59
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=100.00 E-value=9.1e-38 Score=298.84 Aligned_cols=281 Identities=16% Similarity=0.159 Sum_probs=205.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|||||||||||++|++.|+++||+|++++|+.... ..+.+|+.+. +.++++ ++|+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~------------------~~v~~d~~~~--~~~~l~--~~D~ 204 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP------------------GKRFWDPLNP--ASDLLD--GADV 204 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT------------------TCEECCTTSC--CTTTTT--TCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc------------------cceeecccch--hHHhcC--CCCE
Confidence 57999999999999999999999999999999986643 1256777643 345555 6999
Q ss_pred EEEccccccCCc-cccCcchhhhhhhhHHHHHHHH-HHHcCCCeEEEeccccccC-CCCCCCCCCCCCCCCCCchhhhHH
Q 040584 82 VIHFAGLKAVGE-SVQKPLPYFDNNLTGTITLLEV-MAAHGCKNLVFSSSATAYG-WPKVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 82 vih~a~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~-~~~~~~~~iv~~SS~~~yg-~~~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
|||+||...... ....+..++++|+.++.+++++ +++.++++||++||+++|| .....+++|+.+. +.+.|+.+|.
T Consensus 205 Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~ 283 (516)
T 3oh8_A 205 LVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCR 283 (516)
T ss_dssp EEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHH
T ss_pred EEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHH
Confidence 999999754322 3345567889999999999999 5666788999999999998 4555678888876 7789999999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
..|.++..+.. .+++++++||++||||. ..+.+ ++..+..+.. ..+| ++++.++||
T Consensus 284 ~~E~~~~~~~~--~gi~~~ilRp~~v~Gp~------------~~~~~~~~~~~~~g~~---~~~g------~g~~~~~~i 340 (516)
T 3oh8_A 284 DWEHATAPASD--AGKRVAFIRTGVALSGR------------GGMLPLLKTLFSTGLG---GKFG------DGTSWFSWI 340 (516)
T ss_dssp HHHHTTHHHHH--TTCEEEEEEECEEEBTT------------BSHHHHHHHTTC---C---CCCT------TSCCEECEE
T ss_pred HHHHHHHHHHh--CCCCEEEEEeeEEECCC------------CChHHHHHHHHHhCCC---cccC------CCCceEceE
Confidence 99988765433 38999999999999983 11333 3333333322 1233 788999999
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCC----CCC-------chhhccC
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR----PGD-------AEIVYAS 306 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~-------~~~~~~d 306 (347)
|++|+|++++.++++ + ..+++||+++++++|+.|+++.+++.+|.+..+...... ... .....++
T Consensus 341 ~v~Dva~ai~~~l~~---~-~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~ 416 (516)
T 3oh8_A 341 AIDDLTDIYYRAIVD---A-QISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTA 416 (516)
T ss_dssp EHHHHHHHHHHHHHC---T-TCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEEC
T ss_pred eHHHHHHHHHHHHhC---c-ccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeec
Confidence 999999999999987 2 234799999999999999999999999976532211110 011 1233468
Q ss_pred hHHHHHhcCCccccc-HHHHHHHHHHHH
Q 040584 307 TEKAERELNWKAKYG-IDEMCRDQWNWA 333 (347)
Q Consensus 307 ~~k~~~~lg~~p~~~-~~~~i~~~~~~~ 333 (347)
++|++ .|||+|+++ ++++|+++++..
T Consensus 417 ~~kl~-~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 417 PAALE-NLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp CHHHH-HTTCCCSCSSHHHHHHHHHTCC
T ss_pred hHHHH-HCCCCCCCCCHHHHHHHHhCcc
Confidence 89997 689999996 999999999754
No 60
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=100.00 E-value=3.3e-37 Score=288.80 Aligned_cols=308 Identities=14% Similarity=0.108 Sum_probs=219.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhH---HHHHHHHHh-----hccCCCCeEEEecCCCCHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASE---IAVAKVKEL-----AGYQGNNMTFHKLDLRDKAALEVV 73 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (347)
+|+|||||||||||++|+++|++.|++|+++.|+..... ...+.+... ......++.++.+|++|.+.+. .
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 147 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 147 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-C
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-C
Confidence 468999999999999999999999999999999887332 222222221 0111358999999999988777 4
Q ss_pred HccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCC-----CCCCCCCCCCC--
Q 040584 74 FAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGW-----PKVVPCTEEFP-- 146 (347)
Q Consensus 74 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~-----~~~~~~~e~~~-- 146 (347)
+. ++|+|||+||.... ..++...+++|+.++.+++++|++ ++++||++||..+ |. ....+++|+++
T Consensus 148 ~~--~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~ 220 (427)
T 4f6c_A 148 PE--NMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK 220 (427)
T ss_dssp SS--CCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS
T ss_pred cC--CCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccccc
Confidence 44 79999999997642 345678899999999999999999 7889999999998 54 23456778776
Q ss_pred -CCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 147 -LQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 147 -~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
..+.+.|+.+|+++|.+++.+++. +++++++||++||||...+..... .....+..++.....+. .++. +
T Consensus 221 ~~~~~~~Y~~sK~~~E~~~~~~~~~--g~~~~ivRpg~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~-~--- 291 (427)
T 4f6c_A 221 GQLLTSPYTRSKFYSELKVLEAVNN--GLDGRIVRVGNLTSPYNGRWHMRN-IKTNRFSMVMNDLLQLD--CIGV-S--- 291 (427)
T ss_dssp SCCCCSHHHHHHHHHHHHHHHHHHT--TCCEEEEEECCEESCSSSCCCCTT-GGGCHHHHHHHHHHHSS--EEEH-H---
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHc--CCCEEEEeCCeeecCCCCCccccC-cchHHHHHHHHHHHhcC--CCCC-c---
Confidence 557899999999999999998653 899999999999998543221100 00112334566655543 2221 1
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCC-C-----CCC-
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSG-R-----RPG- 298 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-~-----~~~- 298 (347)
.++..++|++++|+|++++.++.. +. .+++||+++++++++.|+++.+.+ +| .+....+ + ...
T Consensus 292 ---~~~~~~~~v~v~DvA~ai~~~~~~---~~-~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~ 361 (427)
T 4f6c_A 292 ---MAEMPVDFSFVDTTARQIVALAQV---NT-PQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDM 361 (427)
T ss_dssp ---HHTCEECCEEHHHHHHHHHHHTTS---CC-CCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTC
T ss_pred ---cccceEEEeeHHHHHHHHHHHHcC---CC-CCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCc
Confidence 357889999999999999999887 23 679999999999999999999998 56 2111100 0 000
Q ss_pred -----------CchhhccChHHHH---HhcCCcccccHHHHHHHHHHHHhhC
Q 040584 299 -----------DAEIVYASTEKAE---RELNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 299 -----------~~~~~~~d~~k~~---~~lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
......+|+++.. +.+||.+...-++.++++++++.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 362 YETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp HHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 0113456777766 5569988866667899999988775
No 61
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=100.00 E-value=2.6e-35 Score=272.89 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=197.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+||||||||+||++|+++|+++| ++|++++|+..........+.........++.++.+|++|.+.+..++...++|
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 114 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYD 114 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCS
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCC
Confidence 4899999999999999999999999 799999998766655555554433222357899999999999888888655899
Q ss_pred EEEEccccccCCccccCc---chhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhH
Q 040584 81 AVIHFAGLKAVGESVQKP---LPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSK 157 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~---~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK 157 (347)
+|||+||..... ...++ ...+++|+.++.+++++|++.+++|||++||.. +..|.++|+.+|
T Consensus 115 ~Vih~Aa~~~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~~--------------~~~p~~~Yg~sK 179 (399)
T 3nzo_A 115 YVLNLSALKHVR-SEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDK--------------AANPVNMMGASK 179 (399)
T ss_dssp EEEECCCCCCGG-GGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCSC--------------SSCCCSHHHHHH
T ss_pred EEEECCCcCCCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC--------------CCCCcCHHHHHH
Confidence 999999986653 44555 578999999999999999999999999999953 345678999999
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCCceEEecccCCCCCCceeeee
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRPALTVFGTDYSTKDGTVVRDY 236 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 236 (347)
..+|.+++.++.+ ++++++||+++|||. ..+. .++.++..|.. +..+ ++..++|
T Consensus 180 ~~~E~~~~~~~~~---~~~~~vR~g~v~G~~------------~~~i~~~~~~i~~g~~--~~~~--------gd~~r~~ 234 (399)
T 3nzo_A 180 RIMEMFLMRKSEE---IAISTARFANVAFSD------------GSLLHGFNQRIQKNQP--IVAP--------NDIKRYF 234 (399)
T ss_dssp HHHHHHHHHHTTT---SEEEEECCCEETTCT------------TSHHHHHHHHHHTTCC--EEEE--------SSCEECE
T ss_pred HHHHHHHHHHhhh---CCEEEeccceeeCCC------------CchHHHHHHHHHhCCC--EecC--------CCCeecc
Confidence 9999999988654 899999999999973 1244 46777777763 3333 3577899
Q ss_pred eeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc---ccHHHHHHHHHHHhCCCC
Q 040584 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG---TSVLEMVAAFEKASGKKI 288 (347)
Q Consensus 237 i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~---~s~~e~~~~i~~~~g~~~ 288 (347)
+|++|+|++++.++.. ...+++|++..+++ +|+.|+++.+.+.+|.++
T Consensus 235 v~v~D~a~~~~~a~~~----~~~g~i~~l~~g~~~~~~s~~ela~~l~~~~G~~~ 285 (399)
T 3nzo_A 235 VTPQESGELCLMSCIF----GENRDIFFPKLSEALHLISFADIAVKYLKQLGYEP 285 (399)
T ss_dssp ECHHHHHHHHHHHHHH----CCTTEEEEECCCTTCCCEEHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHhcc----CCCCCEEEecCCCCCCcccHHHHHHHHHHHhCCCc
Confidence 9999999999999987 23468996666666 999999999999999653
No 62
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=100.00 E-value=3.1e-36 Score=267.35 Aligned_cols=259 Identities=14% Similarity=0.166 Sum_probs=202.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|||||||||||++++++|+++ |++|++++|++.+..... ..+++++.+|+.|.+++.++++ ++|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----------~~~~~~~~~D~~d~~~l~~~~~--~~d 68 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----------DQGVEVRHGDYNQPESLQKAFA--GVS 68 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----------HTTCEEEECCTTCHHHHHHHTT--TCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----------hcCCeEEEeccCCHHHHHHHHh--cCC
Confidence 57999999999999999999999 999999999876543221 1367899999999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+|+... .. ++|+.++.+++++|++.+++|||++||..+|.. ..+|+.+|.++
T Consensus 69 ~vi~~a~~~~--------~~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~--------------~~~y~~~K~~~ 124 (287)
T 2jl1_A 69 KLLFISGPHY--------DN--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES--------------IIPLAHVHLAT 124 (287)
T ss_dssp EEEECCCCCS--------CH--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC--------------CSTHHHHHHHH
T ss_pred EEEEcCCCCc--------Cc--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC--------------CCchHHHHHHH
Confidence 9999998521 11 569999999999999999999999999988621 13799999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHH-cCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA-VGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
|.+++. .+++++++||+.++|+. ... ++.... .+. .. .+ .++..++++|+
T Consensus 125 E~~~~~-----~~~~~~ilrp~~~~~~~----------~~~----~~~~~~~~~~---~~-~~------~~~~~~~~i~~ 175 (287)
T 2jl1_A 125 EYAIRT-----TNIPYTFLRNALYTDFF----------VNE----GLRASTESGA---IV-TN------AGSGIVNSVTR 175 (287)
T ss_dssp HHHHHH-----TTCCEEEEEECCBHHHH----------SSG----GGHHHHHHTE---EE-ES------CTTCCBCCBCH
T ss_pred HHHHHH-----cCCCeEEEECCEecccc----------chh----hHHHHhhCCc---ee-cc------CCCCccCccCH
Confidence 999864 38999999999888752 011 122222 222 22 22 46778899999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCC-----------CCCc--------
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR-----------PGDA-------- 300 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----------~~~~-------- 300 (347)
+|+|+++..++++ +...+++||+++++.+|+.|+++.+.+.+|.+.++...+.. +...
T Consensus 176 ~Dva~~~~~~~~~---~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (287)
T 2jl1_A 176 NELALAAATVLTE---EGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIY 252 (287)
T ss_dssp HHHHHHHHHHHTS---SSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC---CCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999976 23456899999999999999999999999988665443311 1100
Q ss_pred -----hhhccChHHHHHhcCCcccccHHHHHHHHHH
Q 040584 301 -----EIVYASTEKAERELNWKAKYGIDEMCRDQWN 331 (347)
Q Consensus 301 -----~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~ 331 (347)
.....|++|+++.|| |..+++|+++++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 253 DAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp HHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred HHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 123567899999999 66699999999875
No 63
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=100.00 E-value=3.3e-36 Score=266.91 Aligned_cols=259 Identities=14% Similarity=0.151 Sum_probs=196.7
Q ss_pred eEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 4 NILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 4 ~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|||||||||++++++|+++ |++|++++|++.+..... ..++.++.+|+.|.+++.++++ ++|+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~--~~d~ 68 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----------AQGITVRQADYGDEAALTSALQ--GVEK 68 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----------HTTCEEEECCTTCHHHHHHHTT--TCSE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----------cCCCeEEEcCCCCHHHHHHHHh--CCCE
Confidence 5899999999999999999999 999999999876543221 1367889999999999999998 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
|||+|+... ..|+.++.+++++|++.++++||++||..+|. ...+|+.+|.++|
T Consensus 69 vi~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------~~~~y~~sK~~~e 122 (286)
T 2zcu_A 69 LLLISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------------SPLGLADEHIETE 122 (286)
T ss_dssp EEECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------------CCSTTHHHHHHHH
T ss_pred EEEeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------CcchhHHHHHHHH
Confidence 999998521 14788999999999999999999999998861 1147999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
.+++. .+++++++||+.++++. ..++.+...+. .+. ++ .++..++++|++|
T Consensus 123 ~~~~~-----~~~~~~ilrp~~~~~~~---------------~~~~~~~~~~~--~~~-~~------~~~~~~~~i~~~D 173 (286)
T 2zcu_A 123 KMLAD-----SGIVYTLLRNGWYSENY---------------LASAPAALEHG--VFI-GA------AGDGKIASATRAD 173 (286)
T ss_dssp HHHHH-----HCSEEEEEEECCBHHHH---------------HTTHHHHHHHT--EEE-ES------CTTCCBCCBCHHH
T ss_pred HHHHH-----cCCCeEEEeChHHhhhh---------------HHHhHHhhcCC--cee-cc------CCCCccccccHHH
Confidence 99875 28999999998766531 11222222222 222 23 5678899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCC--------CCc-------------
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRP--------GDA------------- 300 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------~~~------------- 300 (347)
+|+++..++.+ +...+++||+++++.+|+.|+++.+.+.+|.+.++...+... ..+
T Consensus 174 va~~~~~~~~~---~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (286)
T 2zcu_A 174 YAAAAARVISE---AGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVG 250 (286)
T ss_dssp HHHHHHHHHHS---SSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC---CCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 99999999987 234678999999989999999999999999876544433210 101
Q ss_pred ---hhhccChHHHHHhcCCcccccHHHHHHHHHHHH
Q 040584 301 ---EIVYASTEKAERELNWKAKYGIDEMCRDQWNWA 333 (347)
Q Consensus 301 ---~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~ 333 (347)
.....|++|+++.|||+|. +++++|+++++||
T Consensus 251 ~~~~~~~~~~~~~~~~lg~~~~-~~~e~l~~~~~~~ 285 (286)
T 2zcu_A 251 ASKGGLFDDSKTLSKLIGHPTT-TLAESVSHLFNVN 285 (286)
T ss_dssp HHTTTTCCCCCHHHHHHTSCCC-CHHHHHHGGGC--
T ss_pred HhCCCCccCchHHHHHhCcCCC-CHHHHHHHHHhhc
Confidence 0144678999999998555 9999999999887
No 64
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=100.00 E-value=4.7e-36 Score=263.51 Aligned_cols=237 Identities=21% Similarity=0.276 Sum_probs=195.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||+||||||+||||++|+++|+++|++|++++|+..... ..++.++.+|++|.+++.++++ ++|
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~--~~d 65 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------------EAHEEIVACDLADAQAVHDLVK--DCD 65 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------------CTTEEECCCCTTCHHHHHHHHT--TCS
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------------CCCccEEEccCCCHHHHHHHHc--CCC
Confidence 7889999999999999999999999999999998765321 1357889999999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCC-CCCCCCCCCCCCCCCchhhhHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWP-KVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~-~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
+|||+||... ...+...+++|+.++.++++++++.++++||++||..+|+.. ...+++|+.+..|.+.|+.+|.+
T Consensus 66 ~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 141 (267)
T 3ay3_A 66 GIIHLGGVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCF 141 (267)
T ss_dssp EEEECCSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECCcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHH
Confidence 9999999752 234567889999999999999999888999999999999864 45678999999999999999999
Q ss_pred HHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
+|.+++.+.++. +++++++||+++|+. + . ++...++++|+
T Consensus 142 ~e~~~~~~~~~~-gi~~~~lrp~~v~~~-~-------~-------------------------------~~~~~~~~~~~ 181 (267)
T 3ay3_A 142 GEDLASLYYHKF-DIETLNIRIGSCFPK-P-------K-------------------------------DARMMATWLSV 181 (267)
T ss_dssp HHHHHHHHHHTT-CCCEEEEEECBCSSS-C-------C-------------------------------SHHHHHHBCCH
T ss_pred HHHHHHHHHHHc-CCCEEEEeceeecCC-C-------C-------------------------------CCCeeeccccH
Confidence 999999887664 899999999999942 0 0 12334578999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCccc
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKAK 319 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~ 319 (347)
+|+|+++..+++. +...+++|++.++. ...+.|..++ +.|||+|+
T Consensus 182 ~dva~~~~~~~~~---~~~~~~~~~~~~~~-------------------------------~~~~~d~~~~-~~lg~~p~ 226 (267)
T 3ay3_A 182 DDFMRLMKRAFVA---PKLGCTVVYGASAN-------------------------------TESWWDNDKS-AFLGWVPQ 226 (267)
T ss_dssp HHHHHHHHHHHHS---SCCCEEEEEECCSC-------------------------------SSCCBCCGGG-GGGCCCCC
T ss_pred HHHHHHHHHHHhC---CCCCceeEecCCCc-------------------------------cccccCHHHH-HHcCCCCC
Confidence 9999999999987 22335778775432 1233577777 88999999
Q ss_pred ccHHHHHHHHHH
Q 040584 320 YGIDEMCRDQWN 331 (347)
Q Consensus 320 ~~~~~~i~~~~~ 331 (347)
++++++++++.+
T Consensus 227 ~~~~~~~~~~~~ 238 (267)
T 3ay3_A 227 DSSEIWREEIEQ 238 (267)
T ss_dssp CCGGGGHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 999999988875
No 65
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-35 Score=277.44 Aligned_cols=275 Identities=16% Similarity=0.209 Sum_probs=204.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC---CCeEEEEeCCCchhHHHHHHHHHhhc------------cCCCCeEEEecCCC-
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG---GYKTVVVDNLDNASEIAVAKVKELAG------------YQGNNMTFHKLDLR- 65 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Dl~- 65 (347)
+|+|||||||||||++|+++|++. |++|+++.|+...... ...+.+... ....++.++.+|++
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 589999999999999999999999 9999999998765432 222221111 11358999999998
Q ss_pred -----CHHHHHHHHccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCC
Q 040584 66 -----DKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVP 140 (347)
Q Consensus 66 -----d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~ 140 (347)
|.+.+.++++ ++|+|||+||.... ..+...+++|+.++.+++++|++.++++||++||.++|+.....+
T Consensus 152 ~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~ 225 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAE--TVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSA 225 (478)
T ss_dssp GGGGCCHHHHHHHHH--HCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTT
T ss_pred cccCCCHHHHHHHHc--CCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCC
Confidence 6778999998 69999999997653 456788999999999999999999999999999999999877778
Q ss_pred CCCCCCCCCCC-----------chhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHH
Q 040584 141 CTEEFPLQAMN-----------PYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ 209 (347)
Q Consensus 141 ~~e~~~~~~~~-----------~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 209 (347)
++|+.+..+.+ .|+.+|.++|.+++.++.+. +++++++||++|||+.... +. ......+..++..
T Consensus 226 ~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ivRpg~v~G~~~~~-g~--~~~~~~~~~l~~~ 301 (478)
T 4dqv_A 226 FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC-ALPVAVFRCGMILADTSYA-GQ--LNMSDWVTRMVLS 301 (478)
T ss_dssp CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECCSSSS-SC--CCTTBHHHHHHHH
T ss_pred cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh-CCCeEEEECceeeCCCccC-Cc--CCHHHHHHHHHHH
Confidence 88887654443 49999999999999998765 8999999999999984211 10 0111223334443
Q ss_pred HH-cCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCC-CCCCCeeEEccCCCc--ccHHHHHHHHHHHhC
Q 040584 210 VA-VGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDD-PKVGCEVYNLGTGKG--TSVLEMVAAFEKASG 285 (347)
Q Consensus 210 ~~-~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~~~~~~~~nv~~~~~--~s~~e~~~~i~~~~g 285 (347)
.. .|..+. .+++.....+.++..++++|++|+|++++.++.+... +...+++||+++++. +|+.|+++.+.+. |
T Consensus 302 ~~~~g~~P~-~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g 379 (478)
T 4dqv_A 302 LMATGIAPR-SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-G 379 (478)
T ss_dssp HHHHCEEES-CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-T
T ss_pred HHHcCcccc-cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-C
Confidence 32 232111 1111000000126789999999999999999875211 235679999999987 9999999999985 7
Q ss_pred CCCC
Q 040584 286 KKIP 289 (347)
Q Consensus 286 ~~~~ 289 (347)
.+.+
T Consensus 380 ~~~~ 383 (478)
T 4dqv_A 380 YPIR 383 (478)
T ss_dssp CSCE
T ss_pred CCcc
Confidence 6653
No 66
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=100.00 E-value=4.2e-36 Score=287.17 Aligned_cols=310 Identities=13% Similarity=0.091 Sum_probs=220.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHH---HHHHHHHh-----hccCCCCeEEEecCCCCHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEI---AVAKVKEL-----AGYQGNNMTFHKLDLRDKAALEVV 73 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (347)
+|+|||||||||||++|+++|++.|++|+++.|+...... ..+.+... ......++.++.+|+.|.+.+. +
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 228 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 228 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence 3789999999999999999999999999999998874322 22222211 1112468999999999977777 4
Q ss_pred HccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCC-----CCCCCCCCCCC--
Q 040584 74 FAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGW-----PKVVPCTEEFP-- 146 (347)
Q Consensus 74 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~-----~~~~~~~e~~~-- 146 (347)
+. ++|+|||+||... ....+...+++|+.++.+++++|++ +.++|||+||..+ |. ....+++|+++
T Consensus 229 ~~--~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~ 301 (508)
T 4f6l_B 229 PE--NMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK 301 (508)
T ss_dssp SS--CCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS
T ss_pred cc--CCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccc
Confidence 44 7999999999764 2345577889999999999999998 6789999999999 43 23456777766
Q ss_pred -CCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 147 -LQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 147 -~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
..+.+.|+.+|+.+|.+++.+.+ .+++++++||++||||...+..... .....+..++.....+. .++.
T Consensus 302 ~~~~~~~Y~~sK~~~E~~~~~~~~--~gi~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~i~~~~~~~--~~~~----- 371 (508)
T 4f6l_B 302 GQLLTSPYTRSKFYSELKVLEAVN--NGLDGRIVRVGNLTSPYNGRWHMRN-IKTNRFSMVMNDLLQLD--CIGV----- 371 (508)
T ss_dssp SBCCCSHHHHHHHHHHHHHHHHHH--TTCEEEEEEECCEESCSSSCCCCTT-CTTCHHHHHHHHHTTCS--EEET-----
T ss_pred cccCCCcHHHHHHHHHHHHHHHHH--cCCCEEEEecceeccCCCCCcccCC-cchHHHHHHHHHHHHcC--CCCC-----
Confidence 44789999999999999999865 3999999999999998643321100 01112344555554432 2221
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCc-c-c----CCCC---
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL-V-K----SGRR--- 296 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~-~-~----~~~~--- 296 (347)
+.+++.++|+|++|+|++++.++.. +. .+++||+++++++|+.|+++.+.+.. .+... . + ....
T Consensus 372 --~~g~~~~~~v~v~DvA~ai~~~~~~---~~-~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~ 444 (508)
T 4f6l_B 372 --SMAEMPVDFSFVDTTARQIVALAQV---NT-PQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYE 444 (508)
T ss_dssp --TGGGSEEECEEHHHHHHHHHHHTTB---CC-SCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHH
T ss_pred --CccCceEEEEcHHHHHHHHHHHHhC---CC-CCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCcc
Confidence 1368899999999999999999987 23 67999999999999999999998754 11100 0 0 0000
Q ss_pred -------CCCchhhccChHHHH---HhcCCcccccHHHHHHHHHHHHhhC
Q 040584 297 -------PGDAEIVYASTEKAE---RELNWKAKYGIDEMCRDQWNWASKN 336 (347)
Q Consensus 297 -------~~~~~~~~~d~~k~~---~~lg~~p~~~~~~~i~~~~~~~~~~ 336 (347)
........+|+++.. +.+||.+...-++.++++++|+.+.
T Consensus 445 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 445 TIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp HHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred chhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 001123446766665 4569998877788899999988775
No 67
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=100.00 E-value=8e-35 Score=264.70 Aligned_cols=268 Identities=21% Similarity=0.308 Sum_probs=202.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
+|+|||||||||||++++++|+++ |+ +|++++|+..+.......+. ..++.++.+|++|.+.+.++++ ++
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~------~~~v~~~~~Dl~d~~~l~~~~~--~~ 92 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN------DPRMRFFIGDVRDLERLNYALE--GV 92 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC------CTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc------CCCEEEEECCCCCHHHHHHHHh--cC
Confidence 479999999999999999999999 97 99999997554433332221 2578999999999999999998 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|+|||+||.........++...+++|+.++.+++++|++.++++||++||..++ .|.++|+.+|.+
T Consensus 93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~ 158 (344)
T 2gn4_A 93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLC 158 (344)
T ss_dssp SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHH
T ss_pred CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHH
Confidence 999999997653334456778999999999999999999999999999998764 346799999999
Q ss_pred HHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeee
Q 040584 160 IEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDY 236 (347)
Q Consensus 160 ~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 236 (347)
+|.+++.++++. .+++++++|||+||||. ..+.+ ++.++..|+. .+.+. +++..++|
T Consensus 159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~------------~~~i~~~~~~~~~g~~-~~~i~-------~~~~~r~~ 218 (344)
T 2gn4_A 159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSR------------GSVVPFFKKLVQNKAS-EIPIT-------DIRMTRFW 218 (344)
T ss_dssp HHHHHHHGGGCCCSSCCEEEEECCCEETTCT------------TSHHHHHHHHHHHTCC-CEEES-------CTTCEEEE
T ss_pred HHHHHHHHHHHhCCCCcEEEEEEeccEECCC------------CCHHHHHHHHHHcCCC-ceEEe-------CCCeEEee
Confidence 999999887642 37999999999999973 12444 4555556541 23322 46778999
Q ss_pred eeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCC-chhhccChHHHHHhcC
Q 040584 237 IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGD-AEIVYASTEKAERELN 315 (347)
Q Consensus 237 i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-~~~~~~d~~k~~~~lg 315 (347)
+|++|+|++++.++++ ...+++||++++ .+|+.|+++.+.+.++. ...+.++.+ .....++..+.++.++
T Consensus 219 i~v~D~a~~v~~~l~~----~~~g~~~~~~~~-~~s~~el~~~i~~~~~~----~~~~~~~~e~~~e~~~~~~~~~~~~~ 289 (344)
T 2gn4_A 219 ITLDEGVSFVLKSLKR----MHGGEIFVPKIP-SMKMTDLAKALAPNTPT----KIIGIRPGEKLHEVMIPKDESHLALE 289 (344)
T ss_dssp ECHHHHHHHHHHHHHH----CCSSCEEEECCC-EEEHHHHHHHHCTTCCE----EECCCCTTCCSSCEEECGGGGGGEEE
T ss_pred EEHHHHHHHHHHHHhh----ccCCCEEecCCC-cEEHHHHHHHHHHhCCe----eEcCCCCCccHhhhccCHhHHHhhcc
Confidence 9999999999999987 235689998765 69999999999865432 222222221 1223345555555555
Q ss_pred Ccccc
Q 040584 316 WKAKY 320 (347)
Q Consensus 316 ~~p~~ 320 (347)
|..-+
T Consensus 290 ~~~~~ 294 (344)
T 2gn4_A 290 FEDFF 294 (344)
T ss_dssp CSSEE
T ss_pred CCCEE
Confidence 55443
No 68
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.4e-35 Score=249.62 Aligned_cols=224 Identities=17% Similarity=0.162 Sum_probs=175.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+|+|||||||||++++++|+++|++|++++|++..... ...++.++.+|+.|.+++.++++ ++|+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 70 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-----------ENEHLKVKKADVSSLDEVCEVCK--GADA 70 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-----------CCTTEEEECCCTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-----------ccCceEEEEecCCCHHHHHHHhc--CCCE
Confidence 4799999999999999999999999999999998664321 12578999999999999999999 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
|||+||.... . ...+++|+.++.+++++|++.+++|||++||..+|+..... ..|+.+..|.+.|+.+|.++|
T Consensus 71 vi~~a~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e 143 (227)
T 3dhn_A 71 VISAFNPGWN-----N-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGE 143 (227)
T ss_dssp EEECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHH
T ss_pred EEEeCcCCCC-----C-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHH
Confidence 9999986421 1 23788999999999999999999999999999987543322 244566678899999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
.+++.++++. +++++++||+++|||... ... + ..+....+. .++. ++++|++|
T Consensus 144 ~~~~~~~~~~-~~~~~ilrp~~v~g~~~~-----~~~----~-------~~~~~~~~~---------~~~~-~~~i~~~D 196 (227)
T 3dhn_A 144 FYLNFLMKEK-EIDWVFFSPAADMRPGVR-----TGR----Y-------RLGKDDMIV---------DIVG-NSHISVED 196 (227)
T ss_dssp HHHHTGGGCC-SSEEEEEECCSEEESCCC-----CCC----C-------EEESSBCCC---------CTTS-CCEEEHHH
T ss_pred HHHHHHhhcc-CccEEEEeCCcccCCCcc-----ccc----e-------eecCCCccc---------CCCC-CcEEeHHH
Confidence 9998887664 999999999999998421 110 0 011111111 2222 79999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
+|++++.++++ +...+++|+++++++.++.+
T Consensus 197 va~ai~~~l~~---~~~~g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 197 YAAAMIDELEH---PKHHQERFTIGYLEHHHHHH 227 (227)
T ss_dssp HHHHHHHHHHS---CCCCSEEEEEECCSCCC---
T ss_pred HHHHHHHHHhC---ccccCcEEEEEeehhcccCC
Confidence 99999999998 45678999999999988753
No 69
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=100.00 E-value=1.1e-34 Score=266.54 Aligned_cols=252 Identities=19% Similarity=0.183 Sum_probs=196.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
|+|||||||||||++|+++|+++|+ +|++++|+ .|.+++.++++ ++|+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------------~d~~~l~~~~~--~~d~ 49 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------------TKEEELESALL--KADF 49 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------------CCHHHHHHHHH--HCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------------CCHHHHHHHhc--cCCE
Confidence 6899999999999999999999998 77776442 56788888888 5999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
|||+||.... +++...+++|+.++.+++++|++.+++ +||++||..+|+ .+.|+.+|.++
T Consensus 50 Vih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~ 110 (369)
T 3st7_A 50 IVHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQG 110 (369)
T ss_dssp EEECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHH
T ss_pred EEECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHH
Confidence 9999997542 356778899999999999999999887 999999999985 57899999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
|++++.++++. +++++++||+++|||... + ....+.. ++..+..+....+ + ++++.++++|+
T Consensus 111 E~~~~~~~~~~-g~~~~i~R~~~v~G~~~~-----~--~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~i~v 173 (369)
T 3st7_A 111 EQLLREYAEEY-GNTVYIYRWPNLFGKWCK-----P--NYNSVIATFCYKIARNEEIQV---N------DRNVELTLNYV 173 (369)
T ss_dssp HHHHHHHHHHH-CCCEEEEEECEEECTTCC-----T--TSSCHHHHHHHHHHTTCCCCC---S------CTTCEEEEEEH
T ss_pred HHHHHHHHHHh-CCCEEEEECCceeCCCCC-----C--CcchHHHHHHHHHHcCCCeEe---c------CCCeEEEEEEH
Confidence 99999998875 899999999999998421 1 1123444 5666666654322 2 57889999999
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCCCCCchhhccChHHHHHhcCCcc
Q 040584 240 VDLADGHIAALRKLDDPKVG-CEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTEKAERELNWKA 318 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~-~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p 318 (347)
+|+|+++..+++. +... +++||+++++.+|+.|+++.+++.+|.+.++...+. +. . ..-......++|.|
T Consensus 174 ~Dva~~~~~~l~~---~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~-~~-~----~~~~l~~~~l~~~p 244 (369)
T 3st7_A 174 DDIVAEIKRAIEG---TPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKL-DN-L----FEKDLYSTYLSYLP 244 (369)
T ss_dssp HHHHHHHHHHHHT---CCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHHTCCCCT-TS-H----HHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhC---CcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccCCC-CC-H----HHHHHHHHHhcccC
Confidence 9999999999987 2222 699999999999999999999999997644332111 11 1 11123334579999
Q ss_pred cccHHHHHHHHH
Q 040584 319 KYGIDEMCRDQW 330 (347)
Q Consensus 319 ~~~~~~~i~~~~ 330 (347)
..+++++++...
T Consensus 245 ~~~~~~~l~~~~ 256 (369)
T 3st7_A 245 STDFSYPLLMNV 256 (369)
T ss_dssp TTCSCCCCCEEE
T ss_pred Ccceeechhhcc
Confidence 887776654433
No 70
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=100.00 E-value=4.8e-33 Score=253.44 Aligned_cols=281 Identities=15% Similarity=0.160 Sum_probs=204.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+|||||||||||++|++.|++.|++|+++.|+........+.+..+. ..+++++.+|+.|.+++.+++++.++|+|
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~---~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE---DKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH---HTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH---hCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 689999999999999999999999999999998743332223222222 24789999999999999999996669999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
||+|+.. |+.++.+++++|++.+ +++||+ | +||. ..+|..+..|.+.|+.+|..+|
T Consensus 88 i~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e 144 (346)
T 3i6i_A 88 VSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVR 144 (346)
T ss_dssp EECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHH
T ss_pred EECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHH
Confidence 9999862 8889999999999999 999885 4 3553 2456667778889999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
+++++ .+++++++||+.+||..... +..... .......+.++| +++..++|+|++|
T Consensus 145 ~~l~~-----~g~~~tivrpg~~~g~~~~~-----------~~~~~~--~~~~~~~~~~~g------~g~~~~~~i~~~D 200 (346)
T 3i6i_A 145 QLVEE-----SGIPFTYICCNSIASWPYYN-----------NIHPSE--VLPPTDFFQIYG------DGNVKAYFVAGTD 200 (346)
T ss_dssp HHHHH-----TTCCBEEEECCEESSCCCSC-----------C-------CCCCSSCEEEET------TSCCCEEEECHHH
T ss_pred HHHHH-----cCCCEEEEEecccccccCcc-----------cccccc--ccCCCceEEEcc------CCCceEEecCHHH
Confidence 99876 38999999999999963111 111110 112223466667 7889999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccC-CCcccHHHHHHHHHHHhCCCCCcccCCCCC--------CCchh----------
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGT-GKGTSVLEMVAAFEKASGKKIPLVKSGRRP--------GDAEI---------- 302 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------~~~~~---------- 302 (347)
+|+++..++.. +...+++|++++ ++.+|+.|+++.+.+.+|.+.++...+... ..+..
T Consensus 201 va~~~~~~l~~---~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 277 (346)
T 3i6i_A 201 IGKFTMKTVDD---VRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIF 277 (346)
T ss_dssp HHHHHHHHTTC---GGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC---ccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHh
Confidence 99999999987 334568899975 588999999999999999887654432110 00000
Q ss_pred -----hccCh-----HHHHHh-cCCcccccHHHHHHHHHHHHhhCC
Q 040584 303 -----VYAST-----EKAERE-LNWKAKYGIDEMCRDQWNWASKNP 337 (347)
Q Consensus 303 -----~~~d~-----~k~~~~-lg~~p~~~~~~~i~~~~~~~~~~~ 337 (347)
..++. .++.+. -+++|+ +++|.++++++|+..+.
T Consensus 278 ~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~~ 322 (346)
T 3i6i_A 278 IKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEKQ 322 (346)
T ss_dssp TTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC-----
T ss_pred ccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhccc
Confidence 00111 123333 367777 99999999999998763
No 71
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=100.00 E-value=1.5e-33 Score=247.45 Aligned_cols=214 Identities=23% Similarity=0.291 Sum_probs=181.4
Q ss_pred CC-ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 1 MA-KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 1 m~-~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|+ |+|+||||+|+||++++++|+++|++|++++|+..+.. ..++.++.+|++|.+++.++++ ++
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~--~~ 65 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------------GPNEECVQCDLADANAVNAMVA--GC 65 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------------CTTEEEEECCTTCHHHHHHHHT--TC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------------CCCCEEEEcCCCCHHHHHHHHc--CC
Confidence 54 68999999999999999999999999999999876542 3578999999999999999999 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCC-CCCCCCCCCCCCCCCCchhhhHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGW-PKVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~-~~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
|+||||||.. ..+.+...+++|+.++.++++++++.+.++||++||..+||. ....+++|+.+..+.+.|+.||.
T Consensus 66 D~vi~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~ 141 (267)
T 3rft_A 66 DGIVHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKC 141 (267)
T ss_dssp SEEEECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHH
T ss_pred CEEEECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHH
Confidence 9999999973 334567889999999999999999999899999999999974 45567889999999999999999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 238 (347)
++|.+++.+++++ +++++++||+.|||+. + ++...++|++
T Consensus 142 ~~e~~~~~~a~~~-g~~~~~vr~~~v~~~~---------------------------------~------~~~~~~~~~~ 181 (267)
T 3rft_A 142 FGENLARMYFDKF-GQETALVRIGSCTPEP---------------------------------N------NYRMLSTWFS 181 (267)
T ss_dssp HHHHHHHHHHHHH-CCCEEEEEECBCSSSC---------------------------------C------STTHHHHBCC
T ss_pred HHHHHHHHHHHHh-CCeEEEEEeecccCCC---------------------------------C------CCCceeeEEc
Confidence 9999999998876 8999999999999851 0 2345567899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHH
Q 040584 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEM 276 (347)
Q Consensus 239 v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~ 276 (347)
++|+++++..+++. +.....+++++++++.++.++
T Consensus 182 ~~d~a~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~ 216 (267)
T 3rft_A 182 HDDFVSLIEAVFRA---PVLGCPVVWGASANDAGWWDN 216 (267)
T ss_dssp HHHHHHHHHHHHHC---SCCCSCEEEECCCCTTCCBCC
T ss_pred HHHHHHHHHHHHhC---CCCCceEEEEeCCCCCCcccC
Confidence 99999999999987 334456788877776665444
No 72
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-32 Score=242.70 Aligned_cols=258 Identities=15% Similarity=0.214 Sum_probs=188.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
|+|||||||||||++++++|++. |++|+++.|++.+.... ...+++++.+|+.|.+++.++++ ++|+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----------~~~~v~~~~~D~~d~~~l~~~~~--~~d~ 68 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----------WRGKVSVRQLDYFNQESMVEAFK--GMDT 68 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----------GBTTBEEEECCTTCHHHHHHHTT--TCSE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----------hhCCCEEEEcCCCCHHHHHHHHh--CCCE
Confidence 57999999999999999999998 99999999987654211 13578999999999999999998 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
|||+|+.... ...|+.++.+++++|++.+++|||++||... .. ..+. .+...+..+|
T Consensus 69 vi~~a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~------~~~~----~~~~~~~~~e 125 (289)
T 3e48_A 69 VVFIPSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QH------NNPF----HMSPYFGYAS 125 (289)
T ss_dssp EEECCCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---ST------TCCS----TTHHHHHHHH
T ss_pred EEEeCCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CC------CCCC----ccchhHHHHH
Confidence 9999986431 1348999999999999999999999999432 11 1111 1222233455
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
..++. . +++++++||+.+||+ +..++........ ..++ .++..+++++++|
T Consensus 126 ~~~~~----~-g~~~~ilrp~~~~~~---------------~~~~~~~~~~~~~---~~~~------~g~~~~~~i~~~D 176 (289)
T 3e48_A 126 RLLST----S-GIDYTYVRMAMYMDP---------------LKPYLPELMNMHK---LIYP------AGDGRINYITRND 176 (289)
T ss_dssp HHHHH----H-CCEEEEEEECEESTT---------------HHHHHHHHHHHTE---ECCC------CTTCEEEEECHHH
T ss_pred HHHHH----c-CCCEEEEeccccccc---------------cHHHHHHHHHCCC---EecC------CCCceeeeEEHHH
Confidence 54443 2 899999999999986 3334444333221 1122 5788999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCC--------C-CCCch-----------
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGR--------R-PGDAE----------- 301 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------~-~~~~~----------- 301 (347)
+|+++..++.. +...+++||++ ++.+|+.|+++.+.+.+|.+..+...+. . .....
T Consensus 177 va~~~~~~l~~---~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 252 (289)
T 3e48_A 177 IARGVIAIIKN---PDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGAR 252 (289)
T ss_dssp HHHHHHHHHHC---GGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcC---CCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHC
Confidence 99999999987 23337899999 9999999999999999998765433221 0 11100
Q ss_pred -hhccChHHHHHhcCCcccccHHHHHHHH
Q 040584 302 -IVYASTEKAERELNWKAKYGIDEMCRDQ 329 (347)
Q Consensus 302 -~~~~d~~k~~~~lg~~p~~~~~~~i~~~ 329 (347)
....+++.+++.+|++|+ ++++.+++.
T Consensus 253 g~~~~~~~~~~~~~G~~p~-~~~~~~~~~ 280 (289)
T 3e48_A 253 GLLDQESNDFKQLVNDQPQ-TLQSFLQEN 280 (289)
T ss_dssp TTTCCCCSHHHHHHSSCCC-CHHHHHHC-
T ss_pred CCccccCchHHHHhCCCCC-CHHHHHHHH
Confidence 112456677888999999 888776543
No 73
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=100.00 E-value=6.2e-33 Score=236.38 Aligned_cols=209 Identities=15% Similarity=0.181 Sum_probs=170.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC-HHHHHHHHccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD-KAALEVVFAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~ 81 (347)
|+|+||||+||||++++++|+++|++|+++.|+..+... ..+++++.+|++| .+++.++++ ++|+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~--~~d~ 66 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ------------YNNVKAVHFDVDWTPEEMAKQLH--GMDA 66 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC------------CTTEEEEECCTTSCHHHHHTTTT--TCSE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh------------cCCceEEEecccCCHHHHHHHHc--CCCE
Confidence 489999999999999999999999999999998765421 1478999999999 999999998 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
|||+||... ...+++|+.++.+++++|++.++++||++||.++++. .+.+| .+..+.+.|+.+|.++|
T Consensus 67 vi~~ag~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~---~~~~e-~~~~~~~~Y~~sK~~~e 134 (219)
T 3dqp_A 67 IINVSGSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP---EKWIG-AGFDALKDYYIAKHFAD 134 (219)
T ss_dssp EEECCCCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG---GGCCS-HHHHHTHHHHHHHHHHH
T ss_pred EEECCcCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC---Ccccc-cccccccHHHHHHHHHH
Confidence 999999754 2367889999999999999999999999999887753 23344 44456789999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
.+++ +. .+++++++||+.+||+... + .+. .++..+++++++|
T Consensus 135 ~~~~---~~-~~i~~~ilrp~~v~g~~~~----------------------~---~~~---------~~~~~~~~i~~~D 176 (219)
T 3dqp_A 135 LYLT---KE-TNLDYTIIQPGALTEEEAT----------------------G---LID---------INDEVSASNTIGD 176 (219)
T ss_dssp HHHH---HS-CCCEEEEEEECSEECSCCC----------------------S---EEE---------ESSSCCCCEEHHH
T ss_pred HHHH---hc-cCCcEEEEeCceEecCCCC----------------------C---ccc---------cCCCcCCcccHHH
Confidence 9986 23 4899999999999997310 0 111 1245678999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHH
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAA 279 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~ 279 (347)
+|+++..++++ +...+++||+++++ .++.|+++.
T Consensus 177 va~~i~~~l~~---~~~~g~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 177 VADTIKELVMT---DHSIGKVISMHNGK-TAIKEALES 210 (219)
T ss_dssp HHHHHHHHHTC---GGGTTEEEEEEECS-EEHHHHHHT
T ss_pred HHHHHHHHHhC---ccccCcEEEeCCCC-ccHHHHHHH
Confidence 99999999987 33457999998775 999998764
No 74
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=100.00 E-value=3.9e-32 Score=234.09 Aligned_cols=214 Identities=17% Similarity=0.177 Sum_probs=170.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCe-EEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNM-TFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+|+||||||+||++++++|+++|++|++++|+..+...... .++ +++.+|++ +.+.+++. ++|
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~--~~~~~~~~--~~D 86 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----------RGASDIVVANLE--EDFSHAFA--SID 86 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----------TTCSEEEECCTT--SCCGGGGT--TCS
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----------CCCceEEEcccH--HHHHHHHc--CCC
Confidence 5899999999999999999999999999999998766543221 267 89999999 66777787 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+||... .+.+...+++|+.++.+++++|++.++++||++||...+.. +..+ .+.+.|+.+|.++
T Consensus 87 ~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~ 154 (236)
T 3e8x_A 87 AVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLA 154 (236)
T ss_dssp EEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHH
T ss_pred EEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHH
Confidence 9999999753 24567899999999999999999999999999999655421 1122 5667899999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
|.+++ . .+++++++||+.+||+... + .+...+ .+...+++++++
T Consensus 155 e~~~~----~-~gi~~~~lrpg~v~~~~~~----------------------~---~~~~~~------~~~~~~~~i~~~ 198 (236)
T 3e8x_A 155 DDELK----R-SSLDYTIVRPGPLSNEEST----------------------G---KVTVSP------HFSEITRSITRH 198 (236)
T ss_dssp HHHHH----H-SSSEEEEEEECSEECSCCC----------------------S---EEEEES------SCSCCCCCEEHH
T ss_pred HHHHH----H-CCCCEEEEeCCcccCCCCC----------------------C---eEEecc------CCCcccCcEeHH
Confidence 99887 2 3899999999999997310 0 112112 344567899999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHH
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFE 281 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~ 281 (347)
|+|+++..++++ +...+++||++++ ..++.|+++.++
T Consensus 199 Dva~~~~~~~~~---~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 199 DVAKVIAELVDQ---QHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp HHHHHHHHHTTC---GGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred HHHHHHHHHhcC---ccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 999999999987 3356799999887 599999998764
No 75
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.97 E-value=4.5e-31 Score=235.53 Aligned_cols=273 Identities=19% Similarity=0.152 Sum_probs=194.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+|+||||||+||++++++|+++| ++|+++.|++.+... ..+. ..+++++.+|+.|.+++.++++ ++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~------~~~~~~~~~D~~d~~~l~~~~~--~~d 74 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELR------LQGAEVVQGDQDDQVIMELALN--GAY 74 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHH------HTTCEEEECCTTCHHHHHHHHT--TCS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHH------HCCCEEEEecCCCHHHHHHHHh--cCC
Confidence 4799999999999999999999998 999999998765321 1121 1368899999999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFI 160 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (347)
+|||+|+.... ...+.|+.++.+++++|++.++++||++||..+|+... ..+...|+.+|.++
T Consensus 75 ~vi~~a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~---------~~~~~~y~~sK~~~ 137 (299)
T 2wm3_A 75 ATFIVTNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA---------GRLAAAHFDGKGEV 137 (299)
T ss_dssp EEEECCCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT---------TSCCCHHHHHHHHH
T ss_pred EEEEeCCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC---------CcccCchhhHHHHH
Confidence 99999985321 12356888999999999999999999998888875321 12346899999999
Q ss_pred HHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHH
Q 040584 161 EEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVV 240 (347)
Q Consensus 161 e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~ 240 (347)
|.+++.. +++++++||+.+||+.... +.+. ....++...+. ++.++..++++|++
T Consensus 138 e~~~~~~-----gi~~~ilrp~~~~~~~~~~-----------~~~~--~~~~g~~~~~~-------~~~~~~~~~~i~~~ 192 (299)
T 2wm3_A 138 EEYFRDI-----GVPMTSVRLPCYFENLLSH-----------FLPQ--KAPDGKSYLLS-------LPTGDVPMDGMSVS 192 (299)
T ss_dssp HHHHHHH-----TCCEEEEECCEEGGGGGTT-----------TCCE--ECTTSSSEEEC-------CCCTTSCEEEECGG
T ss_pred HHHHHHC-----CCCEEEEeecHHhhhchhh-----------cCCc--ccCCCCEEEEE-------ecCCCCccceecHH
Confidence 9998752 8899999999999963110 0000 00112110111 12467789999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCC-------CC--Cchh---h----c
Q 040584 241 DLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR-------PG--DAEI---V----Y 304 (347)
Q Consensus 241 D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------~~--~~~~---~----~ 304 (347)
|+|+++..++.+.. ...+++||+++ +.+|+.|+++.+.+.+|.+.++...+.. +. .... + .
T Consensus 193 Dva~~~~~~l~~~~--~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 269 (299)
T 2wm3_A 193 DLGPVVLSLLKMPE--KYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRP 269 (299)
T ss_dssp GHHHHHHHHHHSHH--HHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcChh--hhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcC
Confidence 99999999997521 12468999975 6799999999999999987654332211 10 0000 0 0
Q ss_pred cChHHHHHhcCCcccccHHHHHHHHH
Q 040584 305 ASTEKAERELNWKAKYGIDEMCRDQW 330 (347)
Q Consensus 305 ~d~~k~~~~lg~~p~~~~~~~i~~~~ 330 (347)
.......+.+|-+|+ +|++.+++..
T Consensus 270 ~~~~~~~~~~g~~~~-~~~~~~~~~~ 294 (299)
T 2wm3_A 270 DRDIELTLRLNPKAL-TLDQWLEQHK 294 (299)
T ss_dssp CCCHHHHHHHCTTCC-CHHHHHHHHG
T ss_pred CCCHHHHHHhCCCCC-CHHHHHHhCh
Confidence 112234456787776 8888887654
No 76
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=99.97 E-value=3.1e-31 Score=230.49 Aligned_cols=230 Identities=17% Similarity=0.187 Sum_probs=171.6
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|+|+|+||||+||||++++++|+++ |++|+++.|++.+.. .+ ..++.++.+|++|.+++.++++ +
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-------~~----~~~~~~~~~D~~d~~~~~~~~~--~ 69 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KI----GGEADVFIGDITDADSINPAFQ--G 69 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HT----TCCTTEEECCTTSHHHHHHHHT--T
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-------hc----CCCeeEEEecCCCHHHHHHHHc--C
Confidence 4689999999999999999999999 899999998743321 11 2467889999999999999998 6
Q ss_pred CcEEEEccccccCCc-------------cccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 79 FDAVIHFAGLKAVGE-------------SVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 79 ~d~vih~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
+|+|||+||...... ..+.....+++|+.++.++++++++.++++||++||..++.. ..
T Consensus 70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~ 141 (253)
T 1xq6_A 70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DH 141 (253)
T ss_dssp CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TC
T ss_pred CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CC
Confidence 999999999653210 112223467899999999999999999999999999987521 11
Q ss_pred CCCC--CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQA--MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~--~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+..+ .+.|+.+|.++|.+++. .+++++++||+.+||+.... .. +. .+....+ ++
T Consensus 142 ~~~~~~~~~y~~sK~~~e~~~~~-----~~i~~~~vrpg~v~~~~~~~--------~~-~~-------~~~~~~~--~~- 197 (253)
T 1xq6_A 142 PLNKLGNGNILVWKRKAEQYLAD-----SGTPYTIIRAGGLLDKEGGV--------RE-LL-------VGKDDEL--LQ- 197 (253)
T ss_dssp GGGGGGGCCHHHHHHHHHHHHHT-----SSSCEEEEEECEEECSCSSS--------SC-EE-------EESTTGG--GG-
T ss_pred ccccccchhHHHHHHHHHHHHHh-----CCCceEEEecceeecCCcch--------hh-hh-------ccCCcCC--cC-
Confidence 2111 13577799999998864 38999999999999984210 00 00 0111111 11
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC---cccHHHHHHHHHHHhCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK---GTSVLEMVAAFEKASGK 286 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~---~~s~~e~~~~i~~~~g~ 286 (347)
...++++++|+|++++.++++ +...+++||+++++ ++|+.|+++.+++.+|+
T Consensus 198 --------~~~~~~~~~Dva~~~~~~~~~---~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 198 --------TDTKTVPRADVAEVCIQALLF---EEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp --------SSCCEEEHHHHHHHHHHHTTC---GGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred --------CCCcEEcHHHHHHHHHHHHcC---ccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 124689999999999999876 23456899998864 59999999999998885
No 77
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=99.97 E-value=1.5e-30 Score=221.75 Aligned_cols=219 Identities=13% Similarity=0.146 Sum_probs=146.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+|+|||||||||++++++|+++|++|+++.|++.+... + ..+++++.+|++|.++ +++. ++|+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~----~~~~~~~~~D~~d~~~--~~~~--~~d~v 65 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-------T----HKDINILQKDIFDLTL--SDLS--DQNVV 65 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-------H----CSSSEEEECCGGGCCH--HHHT--TCSEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-------c----cCCCeEEeccccChhh--hhhc--CCCEE
Confidence 589999999999999999999999999999998654322 1 1478999999999887 6676 69999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccccc-CCCCCCCCCCCCCCCCCCchhhhHHHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAY-GWPKVVPCTEEFPLQAMNPYGRSKLFIE 161 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~y-g~~~~~~~~e~~~~~~~~~Y~~sK~~~e 161 (347)
||+||... ...+.|+.++.+++++|++.+++|+|++||..+| +.....+..|+.+..+.+.|+.+|..+|
T Consensus 66 i~~ag~~~---------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e 136 (221)
T 3ew7_A 66 VDAYGISP---------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAK 136 (221)
T ss_dssp EECCCSST---------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHH
T ss_pred EECCcCCc---------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHH
Confidence 99999732 1246699999999999999888999999998765 4444445667777778889999999999
Q ss_pred HHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHH
Q 040584 162 EICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVD 241 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D 241 (347)
.+. .+.....+++++++||+.+|||.+. . .. + ..+. ..+...+ .+ .++++++|
T Consensus 137 ~~~-~~~~~~~gi~~~ivrp~~v~g~~~~-----~----~~---~----~~~~-~~~~~~~------~~---~~~i~~~D 189 (221)
T 3ew7_A 137 QLE-HLKSHQAEFSWTYISPSAMFEPGER-----T----GD---Y----QIGK-DHLLFGS------DG---NSFISMED 189 (221)
T ss_dssp HHH-HHHTTTTTSCEEEEECSSCCCCC-----------------------------------------------CCCHHH
T ss_pred HHH-HHHhhccCccEEEEeCcceecCCCc-----c----Cc---e----Eecc-ccceecC------CC---CceEeHHH
Confidence 863 3332124899999999999997310 0 00 0 0111 1122212 12 36899999
Q ss_pred HHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 242 LADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 242 ~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
+|++++.++++ +...+++||+++..+.+.+|
T Consensus 190 va~~~~~~l~~---~~~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 190 YAIAVLDEIER---PNHLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp HHHHHHHHHHS---CSCTTSEEECCC--------
T ss_pred HHHHHHHHHhC---ccccCCEEEECCCCcccccc
Confidence 99999999998 45677999999988777655
No 78
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=99.97 E-value=2.1e-30 Score=221.33 Aligned_cols=217 Identities=13% Similarity=0.044 Sum_probs=159.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+|||||||||||++++++|+++|++|+++.|+..+.... ...+++++.+|++|.++ +++. ++|+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~~~D~~d~~~--~~~~--~~d~v 66 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----------LGATVATLVKEPLVLTE--ADLD--SVDAV 66 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----------TCTTSEEEECCGGGCCH--HHHT--TCSEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----------cCCCceEEecccccccH--hhcc--cCCEE
Confidence 5799999999999999999999999999999975543211 13578999999999887 6776 69999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCC-CC--CCCCCCCCCCCCCchhhhHHH
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWP-KV--VPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~-~~--~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
||+||.... ....++|+.++.+++++|++.+ +|||++||+.++... .. .+.+|.....|.+.|+.+|..
T Consensus 67 i~~ag~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~ 138 (224)
T 3h2s_A 67 VDALSVPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQ 138 (224)
T ss_dssp EECCCCCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHH
T ss_pred EECCccCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHH
Confidence 999997521 1235779999999999999998 899999998665432 22 233444444557899999999
Q ss_pred HHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
+|.+ ..+.++ .+++++++||+.+|||.+. . + +. .+.. .+. .+...++++++
T Consensus 139 ~e~~-~~~~~~-~~i~~~ivrp~~v~g~~~~-----~-~----~~-------~~~~-~~~---------~~~~~~~~i~~ 189 (224)
T 3h2s_A 139 YYEY-QFLQMN-ANVNWIGISPSEAFPSGPA-----T-S----YV-------AGKD-TLL---------VGEDGQSHITT 189 (224)
T ss_dssp HHHH-HHHTTC-TTSCEEEEEECSBCCCCCC-----C-C----EE-------EESS-BCC---------CCTTSCCBCCH
T ss_pred HHHH-HHHHhc-CCCcEEEEcCccccCCCcc-----c-C----ce-------eccc-ccc---------cCCCCCceEeH
Confidence 9954 445444 4899999999999997320 0 0 00 1110 111 23345689999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
+|+|++++.++++ +...+++|++++.+....
T Consensus 190 ~DvA~~~~~~l~~---~~~~g~~~~~~~~~~~~~ 220 (224)
T 3h2s_A 190 GNMALAILDQLEH---PTAIRDRIVVRDADLEHH 220 (224)
T ss_dssp HHHHHHHHHHHHS---CCCTTSEEEEEECC----
T ss_pred HHHHHHHHHHhcC---ccccCCEEEEecCcchhc
Confidence 9999999999998 456679999988765544
No 79
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.97 E-value=1.1e-29 Score=231.32 Aligned_cols=235 Identities=15% Similarity=0.127 Sum_probs=174.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecC-CCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD-LRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~~~d 80 (347)
+|+|+|||||||||++|+++|+++|++|+++.|+..... ...+.. ..+++++.+| ++|.+++.++++ ++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-----~~~v~~v~~D~l~d~~~l~~~~~--~~d 75 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-----IPNVTLFQGPLLNNVPLMDTLFE--GAH 75 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-----STTEEEEESCCTTCHHHHHHHHT--TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-----cCCcEEEECCccCCHHHHHHHHh--cCC
Confidence 478999999999999999999999999999999876542 111211 2368899999 999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEecccc--ccCCCCCCCCCCCCCCCCCCchhhhH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSAT--AYGWPKVVPCTEEFPLQAMNPYGRSK 157 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~--~yg~~~~~~~~e~~~~~~~~~Y~~sK 157 (347)
+|||+++... .+.|..+ .+++++|++.+ +++||++||.. .|+. .+.+.|+.+|
T Consensus 76 ~Vi~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~------------~~~~~y~~sK 131 (352)
T 1xgk_A 76 LAFINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP------------WPAVPMWAPK 131 (352)
T ss_dssp EEEECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS------------CCCCTTTHHH
T ss_pred EEEEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC------------CCCccHHHHH
Confidence 9999987421 1346766 99999999998 99999999985 3421 2346799999
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHH--HcCCCCceEEecccCCCCCCceeee
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQV--AVGRRPALTVFGTDYSTKDGTVVRD 235 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~ 235 (347)
.++|++++. . +++++++||+ +||+..... +.+++... ..+. ..+.+++ ++++.++
T Consensus 132 ~~~E~~~~~----~-gi~~~ivrpg-~~g~~~~~~----------~~~~~~~~~~~~g~-~~~~~~~------~~~~~~~ 188 (352)
T 1xgk_A 132 FTVENYVRQ----L-GLPSTFVYAG-IYNNNFTSL----------PYPLFQMELMPDGT-FEWHAPF------DPDIPLP 188 (352)
T ss_dssp HHHHHHHHT----S-SSCEEEEEEC-EEGGGCBSS----------SCSSCBEEECTTSC-EEEEESS------CTTSCEE
T ss_pred HHHHHHHHH----c-CCCEEEEecc-eecCCchhc----------ccccccccccCCCc-eEEeecc------CCCCcee
Confidence 999999875 2 8899999976 688742110 00111000 1121 1123344 5678899
Q ss_pred eeeH-HHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCC
Q 040584 236 YIHV-VDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSG 294 (347)
Q Consensus 236 ~i~v-~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 294 (347)
++|+ +|+|+++..++.... ....+++||+++ +.+|+.|+++.+++.+|.+.++...|
T Consensus 189 ~i~v~~Dva~ai~~~l~~~~-~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp 246 (352)
T 1xgk_A 189 WLDAEHDVGPALLQIFKDGP-QKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP 246 (352)
T ss_dssp EECHHHHHHHHHHHHHHHCH-HHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred eEecHHHHHHHHHHHHhCCc-hhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECC
Confidence 9999 899999999998710 012468999985 67999999999999999887655544
No 80
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.96 E-value=6.7e-29 Score=222.77 Aligned_cols=241 Identities=17% Similarity=0.205 Sum_probs=173.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh-HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS-EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+|+|+|||||||||+++++.|+++|++|+++.|+.... +...+.+..+. ..+++++.+|+.|.+++.++++ ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~l~~~~~--~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK---QLGAKLIEASLDDHQRLVDALK--QVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH---TTTCEEECCCSSCHHHHHHHHT--TCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH---hCCeEEEeCCCCCHHHHHHHHh--CCC
Confidence 47899999999999999999999999999999986432 11122222221 3478899999999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccccCCCCCCCCCCCCCCCC-CCchhhhHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATAYGWPKVVPCTEEFPLQA-MNPYGRSKL 158 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~-~~~Y~~sK~ 158 (347)
+|||+|+.... ..|+.++.+++++|++.+ ++|||+ | +||.....+ +.+..| ...| .+|.
T Consensus 79 ~vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y-~sK~ 139 (313)
T 1qyd_A 79 VVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITF-IDKR 139 (313)
T ss_dssp EEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHH-HHHH
T ss_pred EEEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchH-HHHH
Confidence 99999986432 127888999999999998 999985 3 455322211 122233 4568 9999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 238 (347)
++|++++. .+++++++||+.++|+..... ..... ........+.+++ +++..++++|
T Consensus 140 ~~e~~~~~-----~g~~~~ilrp~~~~~~~~~~~-----------~~~~~-~~~~~~~~~~~~~------~g~~~~~~i~ 196 (313)
T 1qyd_A 140 KVRRAIEA-----ASIPYTYVSSNMFAGYFAGSL-----------AQLDG-HMMPPRDKVLIYG------DGNVKGIWVD 196 (313)
T ss_dssp HHHHHHHH-----TTCCBCEEECCEEHHHHTTTS-----------SCTTC-CSSCCSSEECCBT------TSCSEEEEEC
T ss_pred HHHHHHHh-----cCCCeEEEEeceecccccccc-----------ccccc-cccCCCCeEEEeC------CCCceEEEEE
Confidence 99998864 288999999998887421100 00000 0000111233444 6788999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEccCC-CcccHHHHHHHHHHHhCCCCCccc
Q 040584 239 VVDLADGHIAALRKLDDPKVGCEVYNLGTG-KGTSVLEMVAAFEKASGKKIPLVK 292 (347)
Q Consensus 239 v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~-~~~s~~e~~~~i~~~~g~~~~~~~ 292 (347)
++|+|+++..++.+ +...+++|+++++ +.+|+.|+++.+.+.+|.+.++..
T Consensus 197 ~~Dva~~~~~~l~~---~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~ 248 (313)
T 1qyd_A 197 EDDVGTYTIKSIDD---PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIY 248 (313)
T ss_dssp HHHHHHHHHHHTTC---GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECC
T ss_pred HHHHHHHHHHHHhC---cccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEE
Confidence 99999999999876 2334677887664 789999999999999998765443
No 81
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.96 E-value=1.7e-28 Score=220.72 Aligned_cols=230 Identities=20% Similarity=0.249 Sum_probs=170.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+++|+||||||+||++++++|+++|++|+++.|+........+.+. ..+++++.+|+.|.+++.++++ ++|
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~------~~~v~~v~~Dl~d~~~l~~a~~--~~d 81 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ------SLGAIIVKGELDEHEKLVELMK--KVD 81 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH------HTTCEEEECCTTCHHHHHHHHT--TCS
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh------cCCCEEEEecCCCHHHHHHHHc--CCC
Confidence 45689999999999999999999999999999998752222222221 1368899999999999999998 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccccCCCCCCCCCCCCCCCC-CCchhhhHH
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATAYGWPKVVPCTEEFPLQA-MNPYGRSKL 158 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~-~~~Y~~sK~ 158 (347)
+|||+|+... +.++.+++++|++.+ +++||+ | +||.. .+|..+..| ...| .+|.
T Consensus 82 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~ 137 (318)
T 2r6j_A 82 VVISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVE----EDRINALPPFEALI-ERKR 137 (318)
T ss_dssp EEEECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSC----TTTCCCCHHHHHHH-HHHH
T ss_pred EEEECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccC----cccccCCCCcchhH-HHHH
Confidence 9999998531 456789999999998 999984 3 35532 122223233 3468 9999
Q ss_pred HHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeee
Q 040584 159 FIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 238 (347)
.+|.+++. .+++++++||+.+++. +.+.+.... -....+.+++ +++..+++++
T Consensus 138 ~~e~~~~~-----~~~~~~~lr~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~------~~~~~~~~i~ 190 (318)
T 2r6j_A 138 MIRRAIEE-----ANIPYTYVSANCFASY---------------FINYLLRPY-DPKDEITVYG------TGEAKFAMNY 190 (318)
T ss_dssp HHHHHHHH-----TTCCBEEEECCEEHHH---------------HHHHHHCTT-CCCSEEEEET------TSCCEEEEEC
T ss_pred HHHHHHHh-----cCCCeEEEEcceehhh---------------hhhhhcccc-CCCCceEEec------CCCceeeEee
Confidence 99998864 2889999999877753 222211110 1122445555 6788999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEccC-CCcccHHHHHHHHHHHhCCCCCccc
Q 040584 239 VVDLADGHIAALRKLDDPKVGCEVYNLGT-GKGTSVLEMVAAFEKASGKKIPLVK 292 (347)
Q Consensus 239 v~D~a~a~~~~~~~~~~~~~~~~~~nv~~-~~~~s~~e~~~~i~~~~g~~~~~~~ 292 (347)
++|+++++..++.+ +...+++|++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 191 ~~Dva~~~~~~l~~---~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~ 242 (318)
T 2r6j_A 191 EQDIGLYTIKVATD---PRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIH 242 (318)
T ss_dssp HHHHHHHHHHHTTC---GGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHhcC---ccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceee
Confidence 99999999999876 233467888765 5789999999999999998866443
No 82
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.96 E-value=2.3e-28 Score=220.10 Aligned_cols=234 Identities=18% Similarity=0.205 Sum_probs=171.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC-chh-HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD-NAS-EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|||+|+||||||+||++++++|+++|++|++++|+. ... ....+.+..+. ..+++++.+|+.|.+++.++++ +
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~---~~~v~~v~~D~~d~~~l~~a~~--~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR---SMGVTIIEGEMEEHEKMVSVLK--Q 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH---HTTCEEEECCTTCHHHHHHHHT--T
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh---cCCcEEEEecCCCHHHHHHHHc--C
Confidence 578999999999999999999999999999999986 211 11111222111 2478899999999999999999 6
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccccCCCCCCCCCCCCCCCC-CCchhhh
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATAYGWPKVVPCTEEFPLQA-MNPYGRS 156 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~-~~~Y~~s 156 (347)
+|+|||+|+... +.++.+++++|++.+ ++|||+ | +||... +|..+..| .+.| .+
T Consensus 78 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~s 133 (321)
T 3c1o_A 78 VDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVL-EK 133 (321)
T ss_dssp CSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHH-HH
T ss_pred CCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHH-HH
Confidence 999999998532 556789999999998 999982 3 354321 22223233 4579 99
Q ss_pred HHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHH--HcCCCCceEEecccCCCCCCceee
Q 040584 157 KLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQV--AVGRRPALTVFGTDYSTKDGTVVR 234 (347)
Q Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~ 234 (347)
|..+|.+++.. +++++++||+.++++ +.+.+... ..-....+.+++ +++..+
T Consensus 134 K~~~e~~~~~~-----~~~~~~lrp~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 187 (321)
T 3c1o_A 134 KRIIRRAIEAA-----ALPYTYVSANCFGAY---------------FVNYLLHPSPHPNRNDDIVIYG------TGETKF 187 (321)
T ss_dssp HHHHHHHHHHH-----TCCBEEEECCEEHHH---------------HHHHHHCCCSSCCTTSCEEEET------TSCCEE
T ss_pred HHHHHHHHHHc-----CCCeEEEEeceeccc---------------cccccccccccccccCceEEec------CCCcce
Confidence 99999988742 789999999888764 22211110 001112345555 678899
Q ss_pred eeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccC-CCcccHHHHHHHHHHHhCCCCCccc
Q 040584 235 DYIHVVDLADGHIAALRKLDDPKVGCEVYNLGT-GKGTSVLEMVAAFEKASGKKIPLVK 292 (347)
Q Consensus 235 ~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~-~~~~s~~e~~~~i~~~~g~~~~~~~ 292 (347)
++++++|+|+++..++.. +...+++|++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 188 ~~i~~~Dva~~~~~~l~~---~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~ 243 (321)
T 3c1o_A 188 VLNYEEDIAKYTIKVACD---PRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVH 243 (321)
T ss_dssp EEECHHHHHHHHHHHHHC---GGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEE
T ss_pred eEeeHHHHHHHHHHHHhC---ccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeee
Confidence 999999999999999986 234568888875 5789999999999999998866543
No 83
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.96 E-value=1.2e-28 Score=217.95 Aligned_cols=248 Identities=17% Similarity=0.097 Sum_probs=176.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+. ...++.++.+|++|.+++.++++..
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-------YPDRAEAISLDVTDGERIDVVAADVLARY 77 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-------CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-------ccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999999987765543332 1357889999999999999888643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHH----HHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTIT----LLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~----l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+++...+++|+.++.+ +++.+++.+.++||++||...+. +..
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~ 146 (281)
T 3m1a_A 78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SFA 146 (281)
T ss_dssp SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCT
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CCC
Confidence 6999999999754322 234456688999999554 45555666778999999988762 445
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.||.++|.+++.++.+. .++++++++||.+.+|...............+......... +.
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------- 214 (281)
T 3m1a_A 147 GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ-----LV------- 214 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH-----HH-------
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH-----HH-------
Confidence 67899999999999999988773 38999999999998864221110000001111111111000 00
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhC
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASG 285 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g 285 (347)
......++.+++|+|++++++++.. ..+..|+++++....+.+.+..+.+.++
T Consensus 215 --~~~~~~~~~~~~dva~a~~~~~~~~----~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 215 --QGSDGSQPGDPAKAAAAIRLALDTE----KTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp --HC-----CBCHHHHHHHHHHHHHSS----SCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred --hhccCCCCCCHHHHHHHHHHHHhCC----CCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 1122345788999999999999872 3347899988877777887777776655
No 84
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.96 E-value=2.5e-30 Score=219.42 Aligned_cols=206 Identities=15% Similarity=0.091 Sum_probs=159.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|+|+|+||||+|+||++++++|+++|+ +|++++|++... ..++.++.+|+.|.+++.+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~--------------~~~~~~~~~D~~~~~~~~~~~---- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------------HPRLDNPVGPLAELLPQLDGS---- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------------CTTEECCBSCHHHHGGGCCSC----
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc--------------CCCceEEeccccCHHHHHHhh----
Confidence 458999999999999999999999998 999999876541 246788889998887766655
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHH
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKL 158 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~ 158 (347)
+|+|||+||.... ....+...+++|+.++.+++++|++.++++||++||..+|+. +.+.|+.+|.
T Consensus 66 ~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~ 130 (215)
T 2a35_A 66 IDTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKG 130 (215)
T ss_dssp CSEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHH
T ss_pred hcEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHH
Confidence 8999999996532 234567789999999999999999999999999999998742 3568999999
Q ss_pred HHHHHHHHHhhhcCCce-EEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 159 FIEEICRDVHRSDSEWK-IILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 159 ~~e~~~~~~~~~~~~~~-~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
++|.+++. .+++ ++++||+.+|||... ..+.. .+. +.. .++ + ++ .++++
T Consensus 131 ~~e~~~~~-----~~~~~~~~vrp~~v~g~~~~----------~~~~~---~~~-~~~--~~~-~------~~--~~~~i 180 (215)
T 2a35_A 131 ELEQALQE-----QGWPQLTIARPSLLFGPREE----------FRLAE---ILA-API--ARI-L------PG--KYHGI 180 (215)
T ss_dssp HHHHHHTT-----SCCSEEEEEECCSEESTTSC----------EEGGG---GTT-CCC--C-----------C--HHHHH
T ss_pred HHHHHHHH-----cCCCeEEEEeCceeeCCCCc----------chHHH---HHH-Hhh--hhc-c------CC--CcCcE
Confidence 99998874 2788 999999999998421 01111 111 111 111 1 22 67899
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHH
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVL 274 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~ 274 (347)
|++|+|+++..++++ + .+++||+++++..++.
T Consensus 181 ~~~Dva~~~~~~~~~---~--~~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 181 EACDLARALWRLALE---E--GKGVRFVESDELRKLG 212 (215)
T ss_dssp HHHHHHHHHHHHHTC---C--CSEEEEEEHHHHHHHH
T ss_pred eHHHHHHHHHHHHhc---C--CCCceEEcHHHHHHhh
Confidence 999999999999987 2 2689999887665543
No 85
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.96 E-value=4e-28 Score=204.29 Aligned_cols=204 Identities=22% Similarity=0.222 Sum_probs=156.3
Q ss_pred CC-ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 1 MA-KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 1 m~-~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|+ |+|+||||+|+||++++++|+++|++|++++|++.+.... ...++.++.+|+.|.+++.++++ ++
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~--~~ 68 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----------GPRPAHVVVGDVLQAADVDKTVA--GQ 68 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----------SCCCSEEEESCTTSHHHHHHHHT--TC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc----------cCCceEEEEecCCCHHHHHHHHc--CC
Confidence 55 8999999999999999999999999999999976543210 13478899999999999999998 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|+|||+||.... .. ..++|+.++.++++++++.++++||++||..+|+.....+ .+...|+.+|.+
T Consensus 69 d~vi~~a~~~~~----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~~~~y~~~K~~ 134 (206)
T 1hdo_A 69 DAVIVLLGTRND----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIR 134 (206)
T ss_dssp SEEEECCCCTTC----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHH
T ss_pred CEEEECccCCCC----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------ccchhHHHHHHH
Confidence 999999996542 11 2358999999999999999999999999999987533211 156789999999
Q ss_pred HHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeH
Q 040584 160 IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHV 239 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v 239 (347)
+|.+++. .+++++++||+.+ ++.+. . + .+. ..+.+ .+. .+++++
T Consensus 135 ~e~~~~~-----~~i~~~~lrp~~~-~~~~~-----~-~---~~~-------------~~~~~------~~~--~~~i~~ 178 (206)
T 1hdo_A 135 MHKVLRE-----SGLKYVAVMPPHI-GDQPL-----T-G---AYT-------------VTLDG------RGP--SRVISK 178 (206)
T ss_dssp HHHHHHH-----TCSEEEEECCSEE-ECCCC-----C-S---CCE-------------EESSS------CSS--CSEEEH
T ss_pred HHHHHHh-----CCCCEEEEeCCcc-cCCCC-----C-c---ceE-------------ecccC------CCC--CCccCH
Confidence 9998853 3899999999997 43210 0 0 000 00000 011 479999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 240 VDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 240 ~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
+|+|+++..++++ +...+++||+++++
T Consensus 179 ~Dva~~~~~~~~~---~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 179 HDLGHFMLRCLTT---DEYDGHSTYPSHQY 205 (206)
T ss_dssp HHHHHHHHHTTSC---STTTTCEEEEECCC
T ss_pred HHHHHHHHHHhcC---ccccccceeeeccc
Confidence 9999999999987 34567999998774
No 86
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.96 E-value=4.9e-28 Score=216.54 Aligned_cols=236 Identities=19% Similarity=0.242 Sum_probs=170.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC-ch-hH-HHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD-NA-SE-IAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
+||+|+||||||+||++++++|+++|++|+++.|+. .. .. ...+.+..+. ..+++++.+|+.|.+++.++++
T Consensus 1 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~d~~~l~~~~~-- 75 (307)
T 2gas_A 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ---SLGVILLEGDINDHETLVKAIK-- 75 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH---HTTCEEEECCTTCHHHHHHHHT--
T ss_pred CCcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH---hCCCEEEEeCCCCHHHHHHHHh--
Confidence 468999999999999999999999999999999986 11 00 1111122211 2368899999999999999998
Q ss_pred CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccccCCCCCCCCCCCCCCCC-CCchhh
Q 040584 78 KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATAYGWPKVVPCTEEFPLQA-MNPYGR 155 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~-~~~Y~~ 155 (347)
++|+|||+|+... +.++.+++++|++.+ ++|||+ | +||... ++..+..| .+.| .
T Consensus 76 ~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~ 131 (307)
T 2gas_A 76 QVDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVF-E 131 (307)
T ss_dssp TCSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHH-H
T ss_pred CCCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHH-H
Confidence 6999999998532 456789999999998 999983 3 355321 22233333 4578 9
Q ss_pred hHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeee
Q 040584 156 SKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235 (347)
Q Consensus 156 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 235 (347)
+|..+|.+++.. +++++++||+.++++.... +..... .......+.++| +++..++
T Consensus 132 sK~~~e~~~~~~-----~i~~~~lrp~~~~~~~~~~-----------~~~~~~--~~~~~~~~~~~~------~~~~~~~ 187 (307)
T 2gas_A 132 EKASIRRVIEAE-----GVPYTYLCCHAFTGYFLRN-----------LAQLDA--TDPPRDKVVILG------DGNVKGA 187 (307)
T ss_dssp HHHHHHHHHHHH-----TCCBEEEECCEETTTTGGG-----------TTCTTC--SSCCSSEEEEET------TSCSEEE
T ss_pred HHHHHHHHHHHc-----CCCeEEEEcceeecccccc-----------cccccc--ccCCCCeEEEec------CCCcceE
Confidence 999999988642 7899999999988752100 000000 000112345555 6788999
Q ss_pred eeeHHHHHHHHHHHHHhcCCCCCCCeeEEccC-CCcccHHHHHHHHHHHhCCCCCccc
Q 040584 236 YIHVVDLADGHIAALRKLDDPKVGCEVYNLGT-GKGTSVLEMVAAFEKASGKKIPLVK 292 (347)
Q Consensus 236 ~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~-~~~~s~~e~~~~i~~~~g~~~~~~~ 292 (347)
+++++|+|+++..++.. +...+++|++.+ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 188 ~i~~~Dva~~~~~~l~~---~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 242 (307)
T 2gas_A 188 YVTEADVGTFTIRAAND---PNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTY 242 (307)
T ss_dssp EECHHHHHHHHHHHHTC---GGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEE
T ss_pred EeeHHHHHHHHHHHHcC---ccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceee
Confidence 99999999999999976 233467788765 4689999999999999998876543
No 87
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.96 E-value=1.9e-28 Score=219.38 Aligned_cols=235 Identities=18% Similarity=0.216 Sum_probs=171.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh--HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS--EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
||+|+|||||||||+++++.|+++|++|+++.|+.... ....+.+..+. ..+++++.+|+.|.+++.++++ ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~d~~~l~~~~~--~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK---ASGANIVHGSIDDHASLVEAVK--NV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH---TTTCEEECCCTTCHHHHHHHHH--TC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH---hCCCEEEEeccCCHHHHHHHHc--CC
Confidence 47899999999999999999999999999999986532 22222222221 3478999999999999999999 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CCeEEEeccccccCCCCCCCCCCCCCCCC-CCchhhhH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CKNLVFSSSATAYGWPKVVPCTEEFPLQA-MNPYGRSK 157 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~-~~~Y~~sK 157 (347)
|+|||+|+... +.++.+++++|++.+ ++|||+ |+ ||.. .+|..+..| ...| .+|
T Consensus 79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK 134 (308)
T 1qyc_A 79 DVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVF-EVK 134 (308)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHH-HHH
T ss_pred CEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHH-HHH
Confidence 99999998531 455678999999998 999984 43 5422 122233334 3568 999
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
..+|.+++.. +++++++||+.++|+..... ...... ......+.++| +++..++++
T Consensus 135 ~~~e~~~~~~-----~~~~~~~r~~~~~~~~~~~~-----------~~~~~~--~~~~~~~~~~~------~~~~~~~~i 190 (308)
T 1qyc_A 135 AKVRRAIEAE-----GIPYTYVSSNCFAGYFLRSL-----------AQAGLT--APPRDKVVILG------DGNARVVFV 190 (308)
T ss_dssp HHHHHHHHHH-----TCCBEEEECCEEHHHHTTTT-----------TCTTCS--SCCSSEEEEET------TSCCEEEEE
T ss_pred HHHHHHHHhc-----CCCeEEEEeceecccccccc-----------cccccc--CCCCCceEEec------CCCceEEEe
Confidence 9999988752 78999999999887521100 000000 00112345555 678899999
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccC-CCcccHHHHHHHHHHHhCCCCCccc
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGT-GKGTSVLEMVAAFEKASGKKIPLVK 292 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~-~~~~s~~e~~~~i~~~~g~~~~~~~ 292 (347)
|++|+++++..++.+ +...+++|++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 191 ~~~Dva~~~~~~l~~---~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~ 243 (308)
T 1qyc_A 191 KEEDIGTFTIKAVDD---PRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAY 243 (308)
T ss_dssp CHHHHHHHHHTTSSC---GGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEE
T ss_pred cHHHHHHHHHHHHhC---ccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEe
Confidence 999999999988875 233468888865 4789999999999999998876543
No 88
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.96 E-value=4.9e-28 Score=213.55 Aligned_cols=245 Identities=15% Similarity=0.135 Sum_probs=179.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+........+.+ . ...++.++.+|++|.+++.++++..
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI----G-SPDVISFVHCDVTKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----C-CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHh----C-CCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999998755433332222 1 1236889999999999999888632
Q ss_pred -CCcEEEEccccccCC------ccccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVG------ESVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 -~~d~vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+||||||..... ...+.+...+++|+.++.++++++... +.++||++||..+|...
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 160 (278)
T 2bgk_A 91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG---------- 160 (278)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----------
T ss_pred CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC----------
Confidence 699999999965321 122345668999999999999887753 56799999999887421
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
..+...|+.+|.+.|.+++.++.+. .+++++++|||.++++..... ...............
T Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~~~---------- 223 (278)
T 2bgk_A 161 EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV-------FGVDSSRVEELAHQA---------- 223 (278)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS-------SSCCHHHHHHHHHHT----------
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh-------cccchhHHHHhhhcc----------
Confidence 1145689999999999999887763 389999999999999742111 000112222222211
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHh
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKAS 284 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~ 284 (347)
+.....+++++|+|+++++++.... ....+++|++.++..+++.|+++.+.+.+
T Consensus 224 -----~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 224 -----ANLKGTLLRAEDVADAVAYLAGDES-KYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp -----CSSCSCCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred -----cccccccCCHHHHHHHHHHHcCccc-ccCCCCEEEECCcccccCCccchhhhhhc
Confidence 1112347899999999999986522 23568999999999999999999876543
No 89
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.95 E-value=9.6e-28 Score=208.94 Aligned_cols=229 Identities=15% Similarity=0.157 Sum_probs=171.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL----GGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999999999866554444444332 347888999999999999887632
Q ss_pred -CCcEEEEccccccCCc---cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE---SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+|||+||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..+
T Consensus 87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~ 155 (255)
T 1fmc_A 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNIN 155 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTT
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CCCC
Confidence 5999999999754322 233456788999999999988775 44677999999998873 3345
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.+|.+.|.+++.++.+. .+++++++|||.++++... ..+.+ +......+.
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~----------~~~~~~~~~~~~~~~------------ 213 (255)
T 1fmc_A 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK----------SVITPEIEQKMLQHT------------ 213 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH----------TTCCHHHHHHHHHTC------------
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhh----------hccChHHHHHHHhcC------------
Confidence 6789999999999999887764 4899999999999986210 00112 223333221
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
....+++++|+|+++.+++.... ....+++|+++++...|+
T Consensus 214 -----~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 214 -----PIRRLGQPQDIANAALFLCSPAA-SWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp -----SSCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSCCCC
T ss_pred -----CcccCCCHHHHHHHHHHHhCCcc-ccCCCcEEEECCceeccC
Confidence 11247799999999999986521 224678999999887764
No 90
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.95 E-value=2.7e-28 Score=212.31 Aligned_cols=228 Identities=15% Similarity=0.022 Sum_probs=164.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--CC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--KF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~ 79 (347)
||+|+||||+||||++++++|+++|++|++++|+..... . .+.+|++|.+++.++++.. ++
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~--~~~~D~~~~~~~~~~~~~~~~~~ 63 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A--DLSTPGGRETAVAAVLDRCGGVL 63 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C--CTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c--cccCCcccHHHHHHHHHHcCCCc
Confidence 478999999999999999999999999999999765431 0 1568999999999888733 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCC-C-------CCCC--
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVP-C-------TEEF-- 145 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~-~-------~e~~-- 145 (347)
|+||||||.... ...+...+++|+.++.++++++... +.++||++||..+|+.....+ . +|+.
T Consensus 64 d~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
T 2dkn_A 64 DGLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAI 140 (255)
T ss_dssp SEEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHH
T ss_pred cEEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhh
Confidence 999999997541 3456789999999999999987654 567999999999986431110 0 0110
Q ss_pred -----CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCc-
Q 040584 146 -----PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPA- 217 (347)
Q Consensus 146 -----~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 217 (347)
+..+.+.|+.+|.++|.+++.++++. .+++++++||+.++||. ....+. ......
T Consensus 141 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~--------------~~~~~~---~~~~~~~ 203 (255)
T 2dkn_A 141 ELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL--------------LQASKA---DPRYGES 203 (255)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH--------------HHHHHH---CTTTHHH
T ss_pred hhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh--------------hhhccc---chhhHHH
Confidence 01355789999999999999887662 48999999999999862 011101 000000
Q ss_pred eEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 218 LTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 218 ~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
...+ .+ ..+++++++|+|++++.++.... ....++.|+++++..++++|
T Consensus 204 ~~~~-------~~-~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 204 TRRF-------VA-PLGRGSEPREVAEAIAFLLGPQA-SFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHSC-------CC-TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTHHHHHCT
T ss_pred HHHH-------HH-HhcCCCCHHHHHHHHHHHhCCCc-ccceeeEEEecCCeEeeeec
Confidence 0000 01 33468999999999999998621 13567899999988777654
No 91
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.95 E-value=5.6e-28 Score=213.50 Aligned_cols=249 Identities=19% Similarity=0.189 Sum_probs=183.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+..... ...++.++.+|++|.+++.++++..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA-NGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC-SSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999987766655555543311 1236888999999999999888643
Q ss_pred -CCcEEEEcccccc-CC----ccccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKA-VG----ESVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||... .. .+.+.+...+++|+.++.++++++... +.++||++||...+. +.
T Consensus 90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 158 (281)
T 3svt_A 90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN-----------TH 158 (281)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------CC
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC-----------CC
Confidence 6899999999632 21 133445678999999999998876543 445999999988763 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+++.++.++ .++++.+++||.+.++..... ..............
T Consensus 159 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~----------- 219 (281)
T 3svt_A 159 RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI--------TESAELSSDYAMCT----------- 219 (281)
T ss_dssp TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--------HTCHHHHHHHHHHC-----------
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--------ccCHHHHHHHHhcC-----------
Confidence 456789999999999999988775 369999999999988620000 00001112222111
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc-HHHHHHHHHHHhCCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS-VLEMVAAFEKASGKKI 288 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s-~~e~~~~i~~~~g~~~ 288 (347)
....+.+++|+|+++.+++.... ....+++|++.+|..++ ..++++.+.+.+|.+.
T Consensus 220 ------p~~r~~~~~dva~~~~~l~s~~~-~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 220 ------PLPRQGEVEDVANMAMFLLSDAA-SFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp ------SSSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred ------CCCCCCCHHHHHHHHHHHhCccc-CCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 11236789999999999987622 24578999999888777 7788888888888654
No 92
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.95 E-value=1.1e-27 Score=206.82 Aligned_cols=206 Identities=14% Similarity=0.141 Sum_probs=154.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
+|+|+||||+|+||++++++|+++|+ +|++++|++....... ..++.++.+|++|.+++.++++ ++
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~--~~ 85 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----------YKNVNQEVVDFEKLDDYASAFQ--GH 85 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----------GGGCEEEECCGGGGGGGGGGGS--SC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----------cCCceEEecCcCCHHHHHHHhc--CC
Confidence 47899999999999999999999999 9999999876432110 1257889999999999999998 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLF 159 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~ 159 (347)
|+||||||..... ..+...+++|+.++.++++++++.++++||++||..+|+. +.+.|+.+|.+
T Consensus 86 d~vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~ 149 (242)
T 2bka_A 86 DVGFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGE 149 (242)
T ss_dssp SEEEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHH
T ss_pred CEEEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHH
Confidence 9999999964321 2346788999999999999999988899999999998752 34689999999
Q ss_pred HHHHHHHHhhhcCCc-eEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeee
Q 040584 160 IEEICRDVHRSDSEW-KIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIH 238 (347)
Q Consensus 160 ~e~~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 238 (347)
+|.+++.+ ++ +++++||+.+|||.. . ......+.....+..+. ......+++
T Consensus 150 ~e~~~~~~-----~~~~~~~vrpg~v~~~~~-----~-----~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 202 (242)
T 2bka_A 150 VEAKVEEL-----KFDRYSVFRPGVLLCDRQ-----E-----SRPGEWLVRKFFGSLPD------------SWASGHSVP 202 (242)
T ss_dssp HHHHHHTT-----CCSEEEEEECCEEECTTG-----G-----GSHHHHHHHHHHCSCCT------------TGGGGTEEE
T ss_pred HHHHHHhc-----CCCCeEEEcCceecCCCC-----C-----CcHHHHHHHHhhcccCc------------cccCCcccC
Confidence 99998753 66 699999999999831 0 11222222222221110 001124899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeeEEcc
Q 040584 239 VVDLADGHIAALRKLDDPKVGCEVYNLG 266 (347)
Q Consensus 239 v~D~a~a~~~~~~~~~~~~~~~~~~nv~ 266 (347)
++|+|++++.++.+ ...++.+++.
T Consensus 203 ~~dva~~~~~~~~~----~~~~~~~~~~ 226 (242)
T 2bka_A 203 VVTVVRAMLNNVVR----PRDKQMELLE 226 (242)
T ss_dssp HHHHHHHHHHHHTS----CCCSSEEEEE
T ss_pred HHHHHHHHHHHHhC----ccccCeeEee
Confidence 99999999999987 2233556553
No 93
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.95 E-value=1.9e-26 Score=199.43 Aligned_cols=224 Identities=17% Similarity=0.123 Sum_probs=164.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 80 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+. ..+++++.+|++|.+++.++++.. ++|
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~id 78 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE--------CPGIEPVCVDLGDWDATEKALGGIGPVD 78 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------ccCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence 37899999999999999999999999999999875443322221 135677899999999999999754 489
Q ss_pred EEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----C-CCeEEEeccccccCCCCCCCCCCCCCCCCCC
Q 040584 81 AVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----G-CKNLVFSSSATAYGWPKVVPCTEEFPLQAMN 151 (347)
Q Consensus 81 ~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~ 151 (347)
+|||+||...... ..+.+...+++|+.++.++++++... + .++||++||...|. +..+..
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~ 147 (244)
T 1cyd_A 79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-----------TFPNLI 147 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBH
T ss_pred EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC-----------CCCCcc
Confidence 9999999654322 23345668899999999998876653 4 57999999998874 233456
Q ss_pred chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 152 PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
.|+.+|.+.|.+++.++.+. .+++++++||+.++++.... . .....++.++..+.
T Consensus 148 ~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~-----~---~~~~~~~~~~~~~~--------------- 204 (244)
T 1cyd_A 148 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK-----V---SADPEFARKLKERH--------------- 204 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH-----H---TCCHHHHHHHHHHS---------------
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc-----c---ccCHHHHHHHHhcC---------------
Confidence 89999999999999888773 37999999999999862100 0 00111223322211
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
..+++++++|+|+++++++.... ....++.+++.+|..
T Consensus 205 --~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 205 --PLRKFAEVEDVVNSILFLLSDRS-ASTSGGGILVDAGYL 242 (244)
T ss_dssp --TTSSCBCHHHHHHHHHHHHSGGG-TTCCSSEEEESTTGG
T ss_pred --CccCCCCHHHHHHHHHHHhCchh-hcccCCEEEECCCcc
Confidence 12468999999999999997622 235678899987754
No 94
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.95 E-value=2e-27 Score=207.45 Aligned_cols=234 Identities=16% Similarity=0.148 Sum_probs=169.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+........+.+ ..++.++.+|++|.+++.++++..
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999998766554433332 346789999999999998887643
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----C-CCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----G-CKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++... + .++||++||...+. +..
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 150 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR-----------GEA 150 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCT
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc-----------CCC
Confidence 6999999999765433 23455668889999999998876543 2 45999999988762 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCC-CceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRR-PALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~ 225 (347)
....|+.||.+.+.+++.++.++ .++++.+++||.+++|.. ..+...+........ .....++
T Consensus 151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--- 216 (259)
T 4e6p_A 151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW-----------DGVDALFARYENRPRGEKKRLVG--- 216 (259)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTH-----------HHHHHHHHHHHTCCTTHHHHHHH---
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchh-----------hhhhhhhhhhccCChHHHHHHHh---
Confidence 56789999999999999988764 379999999999998720 011111111111110 0011111
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+.+.+++|+|+++++++.... ....|++|++.+|..+|
T Consensus 217 ---~~~p~~r~~~~~dva~~v~~L~s~~~-~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 217 ---EAVPFGRMGTAEDLTGMAIFLASAES-DYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp ---HHSTTSSCBCTHHHHHHHHHTTSGGG-TTCCSCEEEESTTSSCC
T ss_pred ---ccCCCCCCcCHHHHHHHHHHHhCCcc-CCCCCCEEEECcChhcC
Confidence 12234568899999999998886522 34568999999887654
No 95
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.95 E-value=2.7e-26 Score=198.78 Aligned_cols=225 Identities=16% Similarity=0.133 Sum_probs=168.1
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC-chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD-NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
|+|+++||||+|+||++++++|+++|++|+++.|.. ...+...+.+... +.++.++.+|++|.+++.+++++.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK----GVDSFAIQANVADADEVKAMIKEVVS 78 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999887754 3333334444332 457889999999999999888643
Q ss_pred ---CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+||||||...... +.+++...+++|+.++.++++++ ++.+.++||++||...+. +
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 147 (246)
T 3osu_A 79 QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV-----------G 147 (246)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------C
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------C
Confidence 6999999999764332 33445668999999999999987 455667999999987652 3
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 223 (347)
..+...|+.||.+.+.+.+.++.++ .++++.+++||.+.++.. ..+.+ .......+.
T Consensus 148 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~-----------~~~~~~~~~~~~~~~--------- 207 (246)
T 3osu_A 148 NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT-----------DALSDELKEQMLTQI--------- 207 (246)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCC-----------SCSCHHHHHHHHTTC---------
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcc-----------cccCHHHHHHHHhcC---------
Confidence 3456789999999999999888753 379999999999998731 11222 333333221
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+.+.+|+|+++.+++.... ....|++|++.+|.
T Consensus 208 --------p~~r~~~~~dva~~v~~l~s~~~-~~itG~~i~vdgG~ 244 (246)
T 3osu_A 208 --------PLARFGQDTDIANTVAFLASDKA-KYITGQTIHVNGGM 244 (246)
T ss_dssp --------TTCSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTS
T ss_pred --------CCCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCc
Confidence 11236788999999999887522 24568999998774
No 96
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.95 E-value=6.6e-27 Score=206.36 Aligned_cols=251 Identities=14% Similarity=0.095 Sum_probs=164.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+.+...+.+.... ..+.++.++.+|++|.+++.++++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG-VSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc-cCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999999997655544443331111 11246788999999999999888632
Q ss_pred -CCcEEEEccccccCCc--------cccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccc-cCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE--------SVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATA-YGWPKVVPCTE 143 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~-yg~~~~~~~~e 143 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... + ++||++||... +.
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~--------- 154 (278)
T 1spx_A 85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH--------- 154 (278)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS---------
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc---------
Confidence 6999999999754322 33445678999999999998877653 5 79999999876 52
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEe
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVF 221 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
+..+...|+.||.+.+.+++.++.+. .++++++++||.++++........... ...+........... +
T Consensus 155 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~----p-- 225 (278)
T 1spx_A 155 --ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEET-SKKFYSTMATMKECV----P-- 225 (278)
T ss_dssp --CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHHHC----T--
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchh-hhhhhHHHHHHHhcC----C--
Confidence 23345689999999999999887663 389999999999998732110000000 000111122211110 0
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCC-CCCeeEEccCCCcccHHHHHHHHHHHh
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPK-VGCEVYNLGTGKGTSVLEMVAAFEKAS 284 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~-~~~~~~nv~~~~~~s~~e~~~~i~~~~ 284 (347)
...+++++|+|+++.+++.... .. ..+++|++.+|..+++.|+++.+.+++
T Consensus 226 -----------~~~~~~~~dvA~~v~~l~s~~~-~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 226 -----------AGVMGQPQDIAEVIAFLADRKT-SSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp -----------TSSCBCHHHHHHHHHHHHCHHH-HTTCCSCEEEESTTGGGC------------
T ss_pred -----------CcCCCCHHHHHHHHHHHcCccc-cCcccCcEEEECCCcccccCcccccHHHHh
Confidence 1137899999999999886521 12 467999999999999999999988754
No 97
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.95 E-value=4.5e-27 Score=209.89 Aligned_cols=246 Identities=13% Similarity=0.049 Sum_probs=178.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+........+.+.... +.++.++.+|++|.+++.++++..
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT---GNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---SSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---CCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999999998765554444443321 347889999999999999887643
Q ss_pred -CCcEEEEccccccCC----ccccCcchhhhhhhhHHHHHHHHHHH-----cCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVG----ESVQKPLPYFDNNLTGTITLLEVMAA-----HGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||..... ...+.+...+++|+.++.++++++.. .+.++||++||...+. +.
T Consensus 103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 171 (302)
T 1w6u_A 103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-----------GS 171 (302)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-----------CC
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc-----------CC
Confidence 579999999965432 22345567899999999999887653 2346999999987763 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.+|.+++.+++.++.+. .+++++++|||.++++... . ....... .........
T Consensus 172 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~---~---~~~~~~~-~~~~~~~~~----------- 233 (302)
T 1w6u_A 172 GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAF---S---RLDPTGT-FEKEMIGRI----------- 233 (302)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------------CCTTSH-HHHHHHTTC-----------
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchh---h---hcccchh-hHHHHHhcC-----------
Confidence 456789999999999999988773 3899999999999986210 0 0000011 111222211
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGK 286 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~ 286 (347)
....+++++|+|+++.+++.... ....+++|++.+|..+++.++++.+.+..|.
T Consensus 234 ------p~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 234 ------PCGRLGTVEELANLAAFLCSDYA-SWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp ------TTSSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred ------CcCCCCCHHHHHHHHHHHcCCcc-cccCCCEEEECCCeeeccCCccccchhhccc
Confidence 11236789999999999886521 2346789999999888888888877766553
No 98
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.94 E-value=4.4e-26 Score=198.92 Aligned_cols=216 Identities=12% Similarity=0.072 Sum_probs=165.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+..... ..++.++.+|++|.+++.+++++.
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-------------DPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-------------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 478999999999999999999999999999999866432 246889999999999999888643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||...+.. .+..
T Consensus 95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------~~~~ 165 (260)
T 3un1_A 95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP---------MVGM 165 (260)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC---------BTTC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC---------CCCC
Confidence 6999999999765432 33445678889999999998876 4556779999999876532 2334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.||.+.+.+++.++.++ .++++.+++||.+++|.. .... ...... .
T Consensus 166 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~----------~~~~---~~~~~~-~------------ 219 (260)
T 3un1_A 166 PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMH----------PAET---HSTLAG-L------------ 219 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTS----------CGGG---HHHHHT-T------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCC----------CHHH---HHHHhc-c------------
Confidence 56789999999999999998886 379999999999998731 0111 111111 1
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+.+++|+|++++++.+. ....|++|++.+|...+
T Consensus 220 ----~p~~r~~~~~dva~av~~L~~~---~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 220 ----HPVGRMGEIRDVVDAVLYLEHA---GFITGEILHVDGGQNAG 258 (260)
T ss_dssp ----STTSSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTGGGC
T ss_pred ----CCCCCCcCHHHHHHHHHHhccc---CCCCCcEEEECCCeecc
Confidence 1122467899999999998443 45678999998886543
No 99
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.94 E-value=4.7e-26 Score=197.67 Aligned_cols=229 Identities=14% Similarity=0.084 Sum_probs=165.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+++||||+|+||++++++|+++|++|++++|+....+...+.+. ...+.++.++.+|++|.+++.+++++.
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW---HAYADKVLRVRADVADEGDVNAAIAATMEQ 77 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHS---TTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---HhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999987655443333321 111346888999999999999888632
Q ss_pred --CCcEEEEccccccCCc-------cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE-------SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+.
T Consensus 78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------- 147 (250)
T 2cfc_A 78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV---------- 147 (250)
T ss_dssp HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------
T ss_pred hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc----------
Confidence 6999999999754322 233456788999999987766543 44678999999988763
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+..+...|+.+|.+.+.+++.++.+. .+++++++|||.+++|..... .. ...+...+....
T Consensus 148 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~--~~~~~~~~~~~~-------- 210 (250)
T 2cfc_A 148 -AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR------LD--QPELRDQVLARI-------- 210 (250)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH------HT--SHHHHHHHHTTC--------
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc------cC--CHHHHHHHHhcC--------
Confidence 23456789999999999999887764 389999999999999731000 00 011222222211
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+.+.+|+|+++.+++.... ....++++++.+|.
T Consensus 211 ---------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 211 ---------PQKEIGTAAQVADAVMFLAGEDA-TYVNGAALVMDGAY 247 (250)
T ss_dssp ---------TTCSCBCHHHHHHHHHHHHSTTC-TTCCSCEEEESTTG
T ss_pred ---------CCCCCcCHHHHHHHHHHHcCchh-hcccCCEEEECCce
Confidence 11236799999999999987621 23568899998774
No 100
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.94 E-value=2.7e-26 Score=198.45 Aligned_cols=224 Identities=15% Similarity=0.101 Sum_probs=163.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~ 81 (347)
++|+||||+|+||++++++|+++|++|++++|+....+...+. . .+.+++.+|++|.+++.++++.. ++|+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---C-----PGIEPVCVDLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S-----TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---c-----CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence 6899999999999999999999999999999875443322221 1 24677899999999999999754 5899
Q ss_pred EEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----C-CCeEEEeccccccCCCCCCCCCCCCCCCCCCc
Q 040584 82 VIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----G-CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNP 152 (347)
Q Consensus 82 vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~ 152 (347)
|||+||...... ..+.+...+++|+.++.++++++... + .++||++||...+. +..+...
T Consensus 80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~ 148 (244)
T 3d3w_A 80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVTNHSV 148 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-----------CCCCCch
Confidence 999999754332 22345678999999999988876643 4 57999999988763 3345678
Q ss_pred hhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCC
Q 040584 153 YGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230 (347)
Q Consensus 153 Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 230 (347)
|+.||.++|.+++.++.+. .+++++++|||.++++...... . .. ..........
T Consensus 149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~--~---~~---~~~~~~~~~~---------------- 204 (244)
T 3d3w_A 149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW--S---DP---HKAKTMLNRI---------------- 204 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHS--C---ST---THHHHHHHTC----------------
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhc--c---Ch---HHHHHHHhhC----------------
Confidence 9999999999999888764 3799999999999986310000 0 00 0112222111
Q ss_pred ceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 231 TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 231 ~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+++++|+|+++++++.... ....+++|++.+|...
T Consensus 205 -~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 205 -PLGKFAEVEHVVNAILFLLSDRS-GMTTGSTLPVEGGFWA 243 (244)
T ss_dssp -TTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred -CCCCCcCHHHHHHHHHHHcCccc-cCCCCCEEEECCCccC
Confidence 12357899999999999997521 2356789999887543
No 101
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.94 E-value=9.8e-26 Score=196.80 Aligned_cols=228 Identities=14% Similarity=0.104 Sum_probs=166.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+|+||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|++|.+++.++++..
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME----GHDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999999866554444444332 347889999999999999887632
Q ss_pred CCcEEEEcccccc-CCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKA-VGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~-~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||... ... ..+.+...+++|+.++.++++++.. .+.++||++||...+.. .+..
T Consensus 90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------~~~~ 160 (260)
T 3awd_A 90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV---------NRPQ 160 (260)
T ss_dssp CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------CSSS
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc---------CCCC
Confidence 6999999999654 221 2233466889999999999888764 35679999999876532 1223
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.+|.+.|.+++.++.+. .+++++++|||.+++|... . .. ....+...+..+.
T Consensus 161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~-----~-~~--~~~~~~~~~~~~~------------ 220 (260)
T 3awd_A 161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR-----F-GM--EKPELYDAWIAGT------------ 220 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH-----H-HH--TCHHHHHHHHHTC------------
T ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh-----c-cc--CChHHHHHHHhcC------------
Confidence 34789999999999999888773 3899999999999997310 0 00 0011223332221
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++++|+|+++..++.... ....+++|++.+|.
T Consensus 221 -----~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 221 -----PMGRVGQPDEVASVVQFLASDAA-SLMTGAIVNVDAGF 257 (260)
T ss_dssp -----TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred -----CcCCCCCHHHHHHHHHHHhCchh-ccCCCcEEEECCce
Confidence 11237899999999999987522 23567899998775
No 102
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.94 E-value=3.3e-26 Score=200.52 Aligned_cols=226 Identities=15% Similarity=0.094 Sum_probs=153.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc-----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----- 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 76 (347)
+|+|+||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++.
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK----GFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 378999999999999999999999999999999766554444444332 34688899999999999888753
Q ss_pred -CCCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 77 -TKFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 77 -~~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
.++|+|||+||...... ..+.+...+++|+.++.++++++ ++.+.++||++||...+. +.
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 158 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------SA 158 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc-----------CC
Confidence 26999999999754322 23345668899999999998887 455678999999988763 23
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 224 (347)
.+...|+.+|.+.+.+++.++.+. .+++++++|||.+++|..... ..+ +......
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~~------------ 216 (266)
T 1xq1_A 159 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV----------YDDEFKKVVIS------------ 216 (266)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh----------cCHHHHHHHHh------------
Confidence 456789999999999999887764 389999999999998731100 000 0011000
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
......+++++|+|+++.+++.... ....+++|++.+|..
T Consensus 217 -----~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 217 -----RKPLGRFGEPEEVSSLVAFLCMPAA-SYITGQTICVDGGLT 256 (266)
T ss_dssp ------------CCGGGGHHHHHHHTSGGG-TTCCSCEEECCCCEE
T ss_pred -----cCCCCCCcCHHHHHHHHHHHcCccc-cCccCcEEEEcCCcc
Confidence 1112247899999999999886521 235679999988754
No 103
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.94 E-value=2.7e-26 Score=199.90 Aligned_cols=229 Identities=17% Similarity=0.138 Sum_probs=172.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA----GGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999876666555555443 457889999999999998887643
Q ss_pred -CCcEEEEccccccCCc---cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE---SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... +.++++..+++|+.++.++++++. +.+.++||++||...+. +..+
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 156 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN-----------TNVR 156 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC-----------CCTT
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC-----------CCCC
Confidence 6999999999765422 334556789999999999988864 44567999999988762 3445
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.||.+.+.+++.++.++ .++++.+++||.+..+.. .....+ ........
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~----------~~~~~~~~~~~~~~~------------- 213 (256)
T 3gaf_A 157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDAL----------ATVLTPEIERAMLKH------------- 213 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH----------HHHCCHHHHHHHHTT-------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchh----------hhccCHHHHHHHHhc-------------
Confidence 6789999999999999888775 379999999999887510 000011 11122211
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
.....+.+++|+|+++++++... .....|+++++.+|...++
T Consensus 214 ----~p~~r~~~~~dva~~~~~L~s~~-~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 214 ----TPLGRLGEAQDIANAALFLCSPA-AAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp ----CTTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSCCC-
T ss_pred ----CCCCCCCCHHHHHHHHHHHcCCc-ccCccCCEEEECCCccccC
Confidence 11234678999999999998752 2346789999998877654
No 104
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.94 E-value=5.7e-26 Score=198.04 Aligned_cols=222 Identities=15% Similarity=0.107 Sum_probs=159.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-------GAAVRFRNADVTNEADATAALAFAKQEFG 80 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-------CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999999887655444332 346788999999999999888643
Q ss_pred CCcEEEEccccccCCc--------cccCcchhhhhhhhHHHHHHHHHHHc----------CCCeEEEeccccccCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE--------SVQKPLPYFDNNLTGTITLLEVMAAH----------GCKNLVFSSSATAYGWPKVV 139 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~yg~~~~~ 139 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~----- 155 (257)
T 3tpc_A 81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD----- 155 (257)
T ss_dssp CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-----
Confidence 6999999999764321 23455678899999999999987753 345899999988763
Q ss_pred CCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCc
Q 040584 140 PCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPA 217 (347)
Q Consensus 140 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (347)
+..+...|+.||.+.+.+.+.++.+. .++++.+++||.+.++... .+.+........
T Consensus 156 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-----------~~~~~~~~~~~~---- 214 (257)
T 3tpc_A 156 ------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA-----------GMPQDVQDALAA---- 214 (257)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------------------------C----
T ss_pred ------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc-----------cCCHHHHHHHHh----
Confidence 33456789999999999998888773 3799999999999986311 011111111110
Q ss_pred eEEecccCCCCCCcee-eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 218 LTVFGTDYSTKDGTVV-RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 218 ~~~~g~~~~~~~~~~~-~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.... ..+.+.+|+|+++.+++.. +...|+++++.+|..++
T Consensus 215 ------------~~p~~~r~~~~~dva~~v~~l~s~---~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 215 ------------SVPFPPRLGRAEEYAALVKHICEN---TMLNGEVIRLDGALRMA 255 (257)
T ss_dssp ------------CSSSSCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCC-
T ss_pred ------------cCCCCCCCCCHHHHHHHHHHHccc---CCcCCcEEEECCCccCC
Confidence 1111 2478899999999999975 45788999998887654
No 105
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.94 E-value=2.1e-25 Score=195.84 Aligned_cols=223 Identities=21% Similarity=0.154 Sum_probs=168.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+ +.++.++.+|++|.+++.++++..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-------GRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-------CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999887765544433 347888999999999999888743
Q ss_pred -CCcEEEEccccccC------CccccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV------GESVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 -~~d~vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+||||||.... ..+.+.+...+++|+.++.++++++ ++.+.++||++||...+. +
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~ 152 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA-----------A 152 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------B
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC-----------C
Confidence 69999999997632 1133445678999999999999987 556677999999988762 3
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
..+...|+.||.+.+.+++.++.+. .++++.+++||.+++|... . .. -...........
T Consensus 153 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~-----~-~~---~~~~~~~~~~~~---------- 213 (271)
T 3tzq_B 153 YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE-----V-GL---PQPIVDIFATHH---------- 213 (271)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC------------CHHHHHHHHTTS----------
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc-----c-cC---CHHHHHHHHhcC----------
Confidence 4456789999999999999988874 3799999999999987311 0 00 111222222211
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+...+|+|+++.+++.... ....|+++++.+|.
T Consensus 214 -------~~~r~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 214 -------LAGRIGEPHEIAELVCFLASDRA-AFITGQVIAADSGL 250 (271)
T ss_dssp -------TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred -------CCCCCcCHHHHHHHHHHHhCccc-CCcCCCEEEECCCc
Confidence 11236789999999999987622 34678999998873
No 106
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.94 E-value=1.2e-25 Score=196.54 Aligned_cols=239 Identities=14% Similarity=0.112 Sum_probs=167.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+..+.+...+.+.... +.++.++.+|++|.+++.++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF---GVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 789999999999999999999999999999998665544444443221 346888999999999998888632
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..+
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 153 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ-----------PLWY 153 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CCCC
Confidence 6999999999754322 233456788999999999888764 34667999999998874 2344
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCC-CCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGED-PRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.||.+.+.+++.++.+. .++++++++||.+++|........ ...................
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 221 (263)
T 3ai3_A 154 EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH------------ 221 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH------------
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC------------
Confidence 5689999999999999888763 389999999999998620000000 0000000000111111100
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+++++|+|+++.+++... .....+++|++.+|...|
T Consensus 222 ----~p~~~~~~~~dvA~~~~~l~s~~-~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 222 ----APIKRFASPEELANFFVFLCSER-ATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp ----CTTCSCBCHHHHHHHHHHHTSTT-CTTCCSCEEEESTTCCCC
T ss_pred ----CCCCCCcCHHHHHHHHHHHcCcc-ccCCCCcEEEECCCcccc
Confidence 01134789999999999888752 223568999998887654
No 107
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.94 E-value=1e-25 Score=195.27 Aligned_cols=227 Identities=13% Similarity=0.058 Sum_probs=170.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.+++++.
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK----GFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999876665555554443 457889999999999999887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 149 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA-----------GNP 149 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCT
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CCC
Confidence 5899999999765432 3345567899999999999887643 4556999999987762 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.+|.+.+.+++.++.++ .++++.+++||.+..+.. ..+.+.........
T Consensus 150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~~~~~~~~------------ 206 (247)
T 3lyl_A 150 GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMT-----------DKLTDEQKSFIATK------------ 206 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT-----------TTSCHHHHHHHHTT------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccc-----------hhccHHHHHHHhhc------------
Confidence 56789999999999999888764 479999999999987621 11222222222211
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
.....+.+++|+|+++.+++.... ....|++|++.+|..+
T Consensus 207 ----~~~~~~~~~~dva~~i~~l~s~~~-~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 207 ----IPSGQIGEPKDIAAAVAFLASEEA-KYITGQTLHVNGGMYM 246 (247)
T ss_dssp ----STTCCCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSSC
T ss_pred ----CCCCCCcCHHHHHHHHHHHhCCCc-CCccCCEEEECCCEec
Confidence 112347899999999999887522 3457899999888654
No 108
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.94 E-value=5.1e-26 Score=200.78 Aligned_cols=237 Identities=14% Similarity=0.085 Sum_probs=164.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc-hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN-ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+.. ......+.+... ...++.++.+|++|.+++.++++..
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL---SSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT---CSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc---cCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999988543 333333333221 2457889999999999999888642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||...+. +.
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 170 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV-----------AS 170 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc-----------CC
Confidence 6999999999765433 33445678999999999998886 445567999999988762 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHH-HHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ-VAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 224 (347)
.....|+.||.+.+.+++.++.++ .++++.+++||.+.+|..... ....... ...........+.
T Consensus 171 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-- 238 (281)
T 3v2h_A 171 PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ----------IPDQARTRGITEEQVINEVML-- 238 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh----------cchhhhhcCCCHHHHHHHHHH--
Confidence 455789999999999999888774 379999999999998631100 0000000 0000000000111
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.+.....+++++|+|+++++++.... ....|+++++.+|.
T Consensus 239 ----~~~p~~r~~~~edvA~~v~~L~s~~a-~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 239 ----KGQPTKKFITVEQVASLALYLAGDDA-AQITGTHVSMDGGW 278 (281)
T ss_dssp -----CCTTCSCBCHHHHHHHHHHHHSSGG-GGCCSCEEEESTTG
T ss_pred ----hcCCCCCccCHHHHHHHHHHHcCCCc-CCCCCcEEEECCCc
Confidence 23344568999999999999887521 23578999998774
No 109
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.94 E-value=1.6e-25 Score=197.83 Aligned_cols=244 Identities=17% Similarity=0.153 Sum_probs=168.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh--------HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS--------EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV 73 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (347)
+|+++||||+|+||++++++|+++|++|++++|+.... ....+.........+.++.++.+|++|.+++.++
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 89 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 37899999999999999999999999999999874320 1111111111111246788999999999999988
Q ss_pred HccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCC
Q 040584 74 FAGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVP 140 (347)
Q Consensus 74 ~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~ 140 (347)
+++. ++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------ 163 (281)
T 3s55_A 90 VAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS------ 163 (281)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS------
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC------
Confidence 8643 6999999999765332 33455678899999999998885 344567999999988762
Q ss_pred CCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCC---CCCCCCCCccHHHHHHHHcCCC
Q 040584 141 CTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKG---EDPRGIPNNLMPFVTQVAVGRR 215 (347)
Q Consensus 141 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 215 (347)
+..+...|+.||.+.+.+.+.++.++ .++++.+++||.+++|...... ....................
T Consensus 164 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 236 (281)
T 3s55_A 164 -----ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS-- 236 (281)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHH--
T ss_pred -----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHh--
Confidence 34456789999999999999998874 3799999999999987321000 00000000000000110000
Q ss_pred CceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 216 PALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 216 ~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.......+++++|+|+++++++.... ....|+++++.+|...+
T Consensus 237 -------------~~~~~~~~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 237 -------------LHLQYAPFLKPEEVTRAVLFLVDEAS-SHITGTVLPIDAGATAR 279 (281)
T ss_dssp -------------HCSSSCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGG
T ss_pred -------------hhccCcCCCCHHHHHHHHHHHcCCcc-cCCCCCEEEECCCcccC
Confidence 01112458899999999999997622 24578999998887654
No 110
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.94 E-value=3.7e-26 Score=197.25 Aligned_cols=216 Identities=19% Similarity=0.156 Sum_probs=162.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+|+||||+|+||++++++|+++|++|++++|+.. . ..+.++.+|++|.+++.+++++.
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~ 64 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------------EDLIYVEGDVTREEDVRRAVARAQEE 64 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------------SSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------------cceEEEeCCCCCHHHHHHHHHHHHhh
Confidence 7899999999999999999999999999999998765 2 24578999999999999888732
Q ss_pred -CCcEEEEccccccCCccc----c----CcchhhhhhhhHHHHHHHHHHHc----C------CCeEEEeccccccCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGESV----Q----KPLPYFDNNLTGTITLLEVMAAH----G------CKNLVFSSSATAYGWPKV 138 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~~~----~----~~~~~~~~nv~~~~~l~~~~~~~----~------~~~iv~~SS~~~yg~~~~ 138 (347)
++|+|||+||........ + .+...+++|+.++.++++++... + .++||++||...+.
T Consensus 65 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~---- 140 (242)
T 1uay_A 65 APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE---- 140 (242)
T ss_dssp SCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH----
T ss_pred CCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc----
Confidence 589999999975433211 1 45678899999999999987753 1 12999999998874
Q ss_pred CCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC
Q 040584 139 VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216 (347)
Q Consensus 139 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
+..+...|+.+|.+.+.+++.++.+. .+++++++|||.++++... . ....+...+....
T Consensus 141 -------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~-------~---~~~~~~~~~~~~~-- 201 (242)
T 1uay_A 141 -------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ-------G---LPEKAKASLAAQV-- 201 (242)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH-------T---SCHHHHHHHHTTC--
T ss_pred -------CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhh-------c---cchhHHHHHHhhC--
Confidence 23456789999999999998887663 3799999999999986210 0 0111222222211
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
++ ...+++++|+|+++++++.. +...++.|++.+|..++
T Consensus 202 ~~--------------~~~~~~~~dva~~~~~l~~~---~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 202 PF--------------PPRLGRPEEYAALVLHILEN---PMLNGEVVRLDGALRMA 240 (242)
T ss_dssp CS--------------SCSCCCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCCC
T ss_pred CC--------------cccCCCHHHHHHHHHHHhcC---CCCCCcEEEEcCCeecC
Confidence 00 02378899999999999986 34678999998886543
No 111
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.94 E-value=9.2e-26 Score=197.48 Aligned_cols=232 Identities=14% Similarity=0.111 Sum_probs=166.6
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+++||||+|+||++++++|+++|++|+++.|+....... +.+.....+.++.++.+|++|.+++.+++++.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMET---MKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHH---HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999987766543322 22222222457889999999999999888743
Q ss_pred --CCcEEEEcccc--ccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGL--KAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 --~~d~vih~a~~--~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||. ..... ..+.+...+++|+.++.++++++ ++.+.++||++||...++. .
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------~ 153 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA---------P 153 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC---------C
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc---------C
Confidence 69999999994 22111 23445678999999999999987 5556779999999865421 1
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+..+...|+.+|.+.+.+++.++.+. .++++++++||.++++.. ....+.......
T Consensus 154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~~~~~~----------- 211 (264)
T 3i4f_A 154 GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMK-----------EATIQEARQLKE----------- 211 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGG-----------SCCHHHHHHC-------------
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccc-----------hhccHHHHHHHh-----------
Confidence 33456789999999999999888773 379999999999998621 112222111111
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.......+.+.+|+|+++.+++.... ....|++|++.+|....
T Consensus 212 -----~~~p~~r~~~~~dva~~v~~l~s~~~-~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 212 -----HNTPIGRSGTGEDIARTISFLCEDDS-DMITGTIIEVTGAVDVI 254 (264)
T ss_dssp -----------CCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESCSCCCC
T ss_pred -----hcCCCCCCcCHHHHHHHHHHHcCccc-CCCCCcEEEEcCceeec
Confidence 01122346789999999999997622 24578999998886544
No 112
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.3e-26 Score=201.22 Aligned_cols=234 Identities=15% Similarity=0.016 Sum_probs=161.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhc---cCCCCeEEEecCCCCHHHHHHHHccC-
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAG---YQGNNMTFHKLDLRDKAALEVVFAGT- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (347)
+++|+||||+|+||+++++.|+++|++|++++|+....+...+.+..... ....++.++.+|++|.+++.++++..
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQ 86 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHH
Confidence 37899999999999999999999999999999876554433322221100 00146788999999999998887642
Q ss_pred ----CC-cEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----C-CCeEEEeccccccCCCCCCCCCC
Q 040584 78 ----KF-DAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----G-CKNLVFSSSATAYGWPKVVPCTE 143 (347)
Q Consensus 78 ----~~-d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~yg~~~~~~~~e 143 (347)
++ |+||||||...... ..+.+...+++|+.++.++++++... + .++||++||...+.
T Consensus 87 ~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 157 (264)
T 2pd6_A 87 ACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV--------- 157 (264)
T ss_dssp HHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH---------
T ss_pred HHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc---------
Confidence 34 99999999754322 33455678999999999999887653 4 46999999986542
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEE
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTV 220 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 220 (347)
+..+...|+.+|.+++.+++.++.+. .+++++++|||.+++|.... +.+ +......+
T Consensus 158 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~~~~------- 217 (264)
T 2pd6_A 158 --GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-----------VPQKVVDKITEM------- 217 (264)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------------CTGGG-------
T ss_pred --CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-----------cCHHHHHHHHHh-------
Confidence 23455789999999999999887763 38999999999999973110 101 11111110
Q ss_pred ecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 221 FGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 221 ~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
.....+++++|+|+++..++.... ....++.+++.+|..++...
T Consensus 218 ----------~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~~~~~ 261 (264)
T 2pd6_A 218 ----------IPMGHLGDPEDVADVVAFLASEDS-GYITGTSVEVTGGLFMAENL 261 (264)
T ss_dssp ----------CTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC------
T ss_pred ----------CCCCCCCCHHHHHHHHHHHcCCcc-cCCCCCEEEECCCceecccc
Confidence 011246789999999999987522 24568999998887665544
No 113
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.94 E-value=5.4e-26 Score=197.03 Aligned_cols=224 Identities=14% Similarity=0.102 Sum_probs=162.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+... .+.++.++.+|++|.+++.+++++.
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK---YGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh---cCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999999999765554444443321 1347888999999999999888632
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHH----HHHcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEV----MAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+|||+||...... ..+.+...+++|+.++.+++++ +++.+.++||++||...+. +..+
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~ 153 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT-----------GNVG 153 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC-----------CCCC
Confidence 6999999999754322 2334567899999999776664 4455678999999976542 2234
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHH-HHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFV-TQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.+|.+.+.+++.++.+. .+++++++|||.++++... .+.... .......
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~~~------------ 210 (248)
T 2pnf_A 154 QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA-----------VLSEEIKQKYKEQI------------ 210 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-----------GSCHHHHHHHHHTC------------
T ss_pred CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh-----------hccHHHHHHHHhcC------------
Confidence 5689999999999999887764 3799999999999986310 111111 1111111
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++++|+|+++.+++.... ....+++|++++|.
T Consensus 211 -----~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 211 -----PLGRFGSPEEVANVVLFLCSELA-SYITGEVIHVNGGM 247 (248)
T ss_dssp -----TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred -----CCCCccCHHHHHHHHHHHhCchh-hcCCCcEEEeCCCc
Confidence 11247899999999999987521 23567899998763
No 114
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.94 E-value=5.1e-26 Score=196.73 Aligned_cols=225 Identities=14% Similarity=0.082 Sum_probs=163.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|+++ .|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY----GGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999985 67655544444444332 346888999999999999888642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+|||+||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +.
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~ 145 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------GN 145 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC-----------CC
Confidence 5999999999765322 2334566889999999999887765 3567999999986642 22
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 224 (347)
.+...|+.+|.+.+.+++.++.+. .+++++++|||.++++... .+.+ ....... ..
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~-~~--------- 204 (244)
T 1edo_A 146 IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA-----------KLGEDMEKKILG-TI--------- 204 (244)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-----------TTCHHHHHHHHT-SC---------
T ss_pred CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhh-----------hcChHHHHHHhh-cC---------
Confidence 345789999999999998887764 4899999999999986210 0111 2222221 10
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++++|+|+++.+++.........+++|++.+|.
T Consensus 205 -------~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 205 -------PLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp -------TTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred -------CCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 11237899999999999985422223467899998774
No 115
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.94 E-value=1.2e-25 Score=194.71 Aligned_cols=223 Identities=13% Similarity=0.078 Sum_probs=154.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|+++ .|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA----GINVVVAKGDVKNPEDVENMVKTAMDA 80 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT----TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999998 56655554444444332 357889999999999999887642
Q ss_pred --CCcEEEEccccccCC----ccccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccc-cCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVG----ESVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATA-YGWPKVVPCTEEFP 146 (347)
Q Consensus 78 --~~d~vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~-yg~~~~~~~~e~~~ 146 (347)
++|+||||||..... ...+.+...+++|+.++.++++++.. .+.++||++||... |+
T Consensus 81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------ 148 (247)
T 2hq1_A 81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG------------ 148 (247)
T ss_dssp HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC------------
Confidence 699999999975432 23456678999999999888877653 46679999999754 42
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 223 (347)
..+...|+.+|.+.+.+++.++.+. .++++++++||.+.++.. ..+.. .......+
T Consensus 149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~~~~~~~~~---------- 207 (247)
T 2hq1_A 149 NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMT-----------DVLPDKVKEMYLNN---------- 207 (247)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----------HTSCHHHHHHHHTT----------
T ss_pred CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccch-----------hhcchHHHHHHHhh----------
Confidence 2345789999999999999887764 378999999998876510 00111 11222221
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.....+++++|+|+++.+++.... ....+++|++++|.
T Consensus 208 -------~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 208 -------IPLKRFGTPEEVANVVGFLASDDS-NYITGQVINIDGGL 245 (247)
T ss_dssp -------STTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred -------CCCCCCCCHHHHHHHHHHHcCccc-ccccCcEEEeCCCc
Confidence 111247899999999998887521 23467899998775
No 116
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.94 E-value=6.6e-26 Score=197.95 Aligned_cols=233 Identities=15% Similarity=0.060 Sum_probs=167.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc-----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----- 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 76 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++.
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK----GFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999866555444444332 34678899999999999888752
Q ss_pred -CCCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 77 -TKFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 77 -~~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
.++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 153 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------AV 153 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------CC
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CC
Confidence 26999999999754322 233456688999999999988874 45567999999987753 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+++.++.+. .++++++++||.+.++..... . . .......+......
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~-~~~~~~~~~~~~~~------------ 216 (260)
T 2ae2_A 154 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT---I-Q-DPEQKENLNKLIDR------------ 216 (260)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH---T-T-SHHHHHHHHHHHHT------------
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhh---c-c-ChhhHHHHHHHHhc------------
Confidence 445789999999999999988775 379999999999887510000 0 0 00000001111111
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+++++|+|+++.+++.... ....++++++.+|...+
T Consensus 217 -----~~~~~~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 217 -----CALRRMGEPKELAAMVAFLCFPAA-SYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp -----STTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGC
T ss_pred -----CCCCCCCCHHHHHHHHHHHcCccc-cCCCCCEEEECCCcccc
Confidence 112247899999999999886521 23568999998876543
No 117
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.94 E-value=2.3e-25 Score=194.12 Aligned_cols=231 Identities=11% Similarity=0.071 Sum_probs=168.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ----FPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----STTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999987665554444432 2457889999999999999887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH-----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA-----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... +.+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 150 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD-----------AG 150 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS-----------CC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc-----------CC
Confidence 6999999999654332 234456789999999999988873 33457999999988762 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhcC---CceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSDS---EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
.....|+.||.+.+.+.+.++.++. ++++.+++||.+.++..... ......+ .......
T Consensus 151 ~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~----~~~~~~~---~~~~~~~----------- 212 (257)
T 3imf_A 151 PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK----LWISEEM---AKRTIQS----------- 212 (257)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-----------CC---SHHHHTT-----------
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh----cccCHHH---HHHHHhc-----------
Confidence 4567899999999999998886642 89999999999998731100 0000001 1111111
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+...+|+|+++++++.... ....|+++++.+|..++
T Consensus 213 ------~p~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 213 ------VPLGRLGTPEEIAGLAYYLCSDEA-AYINGTCMTMDGGQHLH 253 (257)
T ss_dssp ------STTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTSC
T ss_pred ------CCCCCCcCHHHHHHHHHHHcCchh-cCccCCEEEECCCcccC
Confidence 111236789999999999987622 24578999998887554
No 118
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.94 E-value=2.4e-25 Score=193.19 Aligned_cols=222 Identities=14% Similarity=0.055 Sum_probs=161.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 80 (347)
+++|+||||+|+||++++++|+++|++|++++|+....+...+.+ ..++.++.+|++|.+++.+++++. ++|
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 478999999999999999999999999999999765544433332 347888999999999999998865 699
Q ss_pred EEEEccccccCC----ccccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCc
Q 040584 81 AVIHFAGLKAVG----ESVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNP 152 (347)
Q Consensus 81 ~vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~ 152 (347)
+||||||..... ...+.+...+++|+.++.++++++. +.+.++||++||...+. +..+...
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~ 155 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA-----------GNPGQAN 155 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-------------CCSCSHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc-----------CCCCCch
Confidence 999999975432 2345677899999999999988764 34567999999988763 3345678
Q ss_pred hhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCC
Q 040584 153 YGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 153 Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
|+.||.+.+.+++.++.++ .++++.+++||.+.++.. ..+.. .......+
T Consensus 156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~~~~~~~~---------------- 208 (249)
T 3f9i_A 156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT-----------DKLNEKQREAIVQK---------------- 208 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-----------------CCHHHHHHHHHH----------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcc-----------cccCHHHHHHHHhc----------------
Confidence 9999999999999887764 379999999999987621 11111 22222211
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.....+.+++|+|+++.+++.... ....|++|++.+|..
T Consensus 209 -~~~~~~~~~~dva~~~~~l~s~~~-~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 209 -IPLGTYGIPEDVAYAVAFLASNNA-SYITGQTLHVNGGML 247 (249)
T ss_dssp -CTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSS
T ss_pred -CCCCCCcCHHHHHHHHHHHcCCcc-CCccCcEEEECCCEe
Confidence 112347889999999999997632 235789999988754
No 119
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.94 E-value=1.8e-26 Score=201.53 Aligned_cols=230 Identities=16% Similarity=0.106 Sum_probs=167.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++..+.+|++|.+++.++++..
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE----GLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999766554444444332 346888999999999988877632
Q ss_pred -CCcEEEEccccccC-C----ccccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV-G----ESVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||.... . ...+.+...+++|+.++.++++++. +.+.++||++||...|. +.
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 158 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH-----------PF 158 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC-----------CC
Confidence 69999999996431 1 1233456788999999998888764 45667999999998873 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.+|.+.+.+++.++.+. .++++++++||.+.++.... .... .........
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------~~~~--~~~~~~~~~------------- 217 (260)
T 2zat_A 159 PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV------LWMD--KARKEYMKE------------- 217 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH------HHSS--HHHHHHHHH-------------
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh------cccC--hHHHHHHHh-------------
Confidence 456789999999999999887764 37999999999998762100 0000 000011110
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
......+++++|+|+++.+++.... ....+++|++.+|...|
T Consensus 218 ----~~~~~~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 218 ----SLRIRRLGNPEDCAGIVSFLCSEDA-SYITGETVVVGGGTASR 259 (260)
T ss_dssp ----HHTCSSCBCGGGGHHHHHHHTSGGG-TTCCSCEEEESTTCCCC
T ss_pred ----cCCCCCCCCHHHHHHHHHHHcCccc-CCccCCEEEECCCcccc
Confidence 0112347899999999999886521 23468999999887665
No 120
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.94 E-value=4.1e-25 Score=188.15 Aligned_cols=204 Identities=11% Similarity=0.079 Sum_probs=147.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHH-hCCCeEEEEeCCCc-hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLL-LGGYKTVVVDNLDN-ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
||++|+||||+|+||++++++|+ ++|++|+++.|++. ..+... . ...++.++.+|++|.+++.++++ +
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~----~~~~~~~~~~D~~d~~~~~~~~~--~ 73 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I----DHERVTVIEGSFQNPGXLEQAVT--N 73 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H----TSTTEEEEECCTTCHHHHHHHHT--T
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c----CCCceEEEECCCCCHHHHHHHHc--C
Confidence 45669999999999999999999 89999999999755 433221 0 14578999999999999999998 6
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCC-chhhhH
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMN-PYGRSK 157 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~-~Y~~sK 157 (347)
+|+|||+||.. |+. ++++++++++.+++|||++||..+|+..... ..+. ...... .|+.+|
T Consensus 74 ~d~vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~-~~~~~~~~y~~~K 135 (221)
T 3r6d_A 74 AEVVFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKW-TFDNLPISYVQGE 135 (221)
T ss_dssp CSEEEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHH-HHHTSCHHHHHHH
T ss_pred CCEEEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccc-cccccccHHHHHH
Confidence 99999999852 445 8899999999999999999999998632110 0000 001223 799999
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
..+|.+++. .+++++++||+.++++... . . +..... .......++
T Consensus 136 ~~~e~~~~~-----~~i~~~~vrpg~v~~~~~~-------~---------------~---~~~~~~-----~~~~~~~~~ 180 (221)
T 3r6d_A 136 RQARNVLRE-----SNLNYTILRLTWLYNDPEX-------T---------------D---YELIPE-----GAQFNDAQV 180 (221)
T ss_dssp HHHHHHHHH-----SCSEEEEEEECEEECCTTC-------C---------------C---CEEECT-----TSCCCCCEE
T ss_pred HHHHHHHHh-----CCCCEEEEechhhcCCCCC-------c---------------c---eeeccC-----CccCCCcee
Confidence 999998864 3899999999999986210 0 0 000000 001112379
Q ss_pred eHHHHHHHHHHHH--HhcCCCCCCCeeEEccCCC
Q 040584 238 HVVDLADGHIAAL--RKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 238 ~v~D~a~a~~~~~--~~~~~~~~~~~~~nv~~~~ 269 (347)
+.+|+|+++++++ ... ....++.+.++++.
T Consensus 181 ~~~dvA~~~~~l~~~~~~--~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 181 SREAVVKAIFDILHAADE--TPFHRTSIGVGEPG 212 (221)
T ss_dssp EHHHHHHHHHHHHTCSCC--GGGTTEEEEEECTT
T ss_pred eHHHHHHHHHHHHHhcCh--hhhhcceeeecCCC
Confidence 9999999999999 652 22456778776543
No 121
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.93 E-value=1.6e-25 Score=194.72 Aligned_cols=225 Identities=19% Similarity=0.154 Sum_probs=143.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... ..++.++.+|++|.+++.++++..
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD----GGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999877666555555443 457889999999999999888643
Q ss_pred -CCcEEEEcccccc---CC----ccccCcchhhhhhhhHHHHHHHH----HHHcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKA---VG----ESVQKPLPYFDNNLTGTITLLEV----MAAHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 -~~d~vih~a~~~~---~~----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||... .. ...+.+...+++|+.++.+++++ +++.+.++||++||...|.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 153 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL----------- 153 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-----------
Confidence 6999999999732 11 13344567899999997766665 4445667999999998762
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+...|+.||.+.+.+++.++.++ .++++.+++||.++++..... . ...+...+..
T Consensus 154 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~----~~~~~~~~~~----------- 210 (253)
T 3qiv_A 154 ---YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT-----T----PKEMVDDIVK----------- 210 (253)
T ss_dssp ---------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc-----C----cHHHHHHHhc-----------
Confidence 33569999999999999998885 379999999999998631100 0 0001111111
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
+.....+.+++|+|+++.+++.... ....|++|++.+|..+
T Consensus 211 ------~~~~~~~~~~~dva~~~~~l~s~~~-~~~tG~~~~vdgG~~~ 251 (253)
T 3qiv_A 211 ------GLPLSRMGTPDDLVGMCLFLLSDEA-SWITGQIFNVDGGQII 251 (253)
T ss_dssp ---------------CCHHHHHHHHHHSGGG-TTCCSCEEEC------
T ss_pred ------cCCCCCCCCHHHHHHHHHHHcCccc-cCCCCCEEEECCCeec
Confidence 1222346678999999999987522 2457899999888654
No 122
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.93 E-value=1.3e-25 Score=195.80 Aligned_cols=229 Identities=15% Similarity=0.121 Sum_probs=168.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|+++ .|+........+.+... +.++.++.+|++|.+++.++++..
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL----GVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999886 67655554444444332 457889999999999999888643
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~ 148 (258)
T 3oid_A 80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR-----------YL 148 (258)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS-----------BC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC-----------CC
Confidence 6899999999654332 233455689999999999988774 34566999999988762 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+++.++.++ .++++.+++||.+..+..... . .............
T Consensus 149 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-------~-~~~~~~~~~~~~~----------- 209 (258)
T 3oid_A 149 ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF-------P-NREDLLEDARQNT----------- 209 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC-------T-THHHHHHHHHHHC-----------
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc-------c-cCHHHHHHHHhcC-----------
Confidence 556789999999999999998875 379999999999987621100 0 0011222222211
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+.+++|+|+++++++... .....|+++++.+|...
T Consensus 210 ------p~~r~~~~~dva~~v~~L~s~~-~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 210 ------PAGRMVEIKDMVDTVEFLVSSK-ADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp ------TTSSCBCHHHHHHHHHHHTSST-TTTCCSCEEEESTTGGG
T ss_pred ------CCCCCcCHHHHHHHHHHHhCcc-cCCccCCEEEECCCccC
Confidence 1123678999999999988762 23467899999888643
No 123
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.93 E-value=2.5e-25 Score=194.45 Aligned_cols=229 Identities=16% Similarity=0.114 Sum_probs=170.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... ...++.++.+|++|.+++.++++..
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL---GSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---SSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---CCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 379999999999999999999999999999999876665555554432 1257889999999999999887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++... +.++||++||...+. .+..
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~ 156 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYP 156 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCC
Confidence 6999999999765332 33445667899999999998876654 677999999976521 1234
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.||.+.+.+++.++.++ .++++.+++||.++++... ..............
T Consensus 157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~----------~~~~~~~~~~~~~~------------ 214 (262)
T 3pk0_A 157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLL----------ENGEEYIASMARSI------------ 214 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH----------TTCHHHHHHHHTTS------------
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccc----------ccCHHHHHHHHhcC------------
Confidence 56789999999999999988874 3899999999999986210 00112222222211
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+...+|+|+++.+++.... ....|+++++.+|..+
T Consensus 215 -----p~~r~~~p~dva~~v~~L~s~~~-~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 215 -----PAGALGTPEDIGHLAAFLATKEA-GYITGQAIAVDGGQVL 253 (262)
T ss_dssp -----TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTC
T ss_pred -----CCCCCcCHHHHHHHHHHHhCccc-cCCcCCEEEECCCeec
Confidence 11136789999999999987522 3467899999888654
No 124
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.93 E-value=2.6e-25 Score=195.00 Aligned_cols=224 Identities=16% Similarity=0.109 Sum_probs=166.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc-hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN-ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|+++.|... ..+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA----GGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999887443 333333333332 457889999999999999887643
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... +.+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 172 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM-----------GN 172 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH-----------CC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------CC
Confidence 6999999999765432 334556789999999999988764 34567999999987652 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHH-HHHHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFV-TQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~ 224 (347)
.....|+.||.+.+.+.+.++.++ .++++.+++||.+.++. ..... .......
T Consensus 173 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~--------------~~~~~~~~~~~~~---------- 228 (269)
T 4dmm_A 173 PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM--------------TSELAAEKLLEVI---------- 228 (269)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC--------------SCHHHHHHHGGGC----------
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc--------------cccccHHHHHhcC----------
Confidence 445789999999999999888764 37999999999998762 11111 1111111
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+.+.+|+|+++.+++..+......|++|++.+|..+
T Consensus 229 -------p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 229 -------PLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp -------TTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred -------CCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence 1123678999999999999762223467899999888654
No 125
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.93 E-value=2.7e-25 Score=195.71 Aligned_cols=231 Identities=14% Similarity=0.136 Sum_probs=166.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+ +.++.++.+|++|.+++.++++..
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-------GSKAFGVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999998765544433332 457889999999999999888643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 168 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS-----------AIA 168 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc-----------CCC
Confidence 6999999999754432 2334556788999999999887653 3456999999988762 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.||.+.+.+++.++.++ .++++.+++||.+..+........ .............
T Consensus 169 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~-------------- 230 (277)
T 4dqx_A 169 DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE----AKDPAKLRSDFNA-------------- 230 (277)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT----CSCHHHHHHHHHT--------------
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccc----ccchhHHHHHHHh--------------
Confidence 56789999999999999888775 379999999999887510000000 0000001111111
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
......+.+++|+|+++++++.... ....|+++++.+|..++
T Consensus 231 ---~~~~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 231 ---RAVMDRMGTAEEIAEAMLFLASDRS-RFATGSILTVDGGSSIG 272 (277)
T ss_dssp ---TSTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESSSSSSC
T ss_pred ---cCcccCCcCHHHHHHHHHHHhCCcc-CCCcCCEEEECCchhhh
Confidence 1122346789999999999987622 24678999998887554
No 126
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.93 E-value=1.5e-25 Score=195.26 Aligned_cols=234 Identities=15% Similarity=0.141 Sum_probs=164.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA----GGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999766555444444332 346888999999999998887632
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+ .++||++||...+. +
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 145 (256)
T 1geg_A 77 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------G 145 (256)
T ss_dssp TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------C
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-----------C
Confidence 6999999999754322 2334556899999999888776553 34 56999999987652 2
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHc--CC-CCc-eEE
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAV--GR-RPA-LTV 220 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~-~~~ 220 (347)
......|+.||.+.+.+++.++.+. .++++++++||.+.++. .......... +. ... ...
T Consensus 146 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~--------------~~~~~~~~~~~~~~~~~~~~~~ 211 (256)
T 1geg_A 146 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM--------------WAEIDRQVSEAAGKPLGYGTAE 211 (256)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH--------------HHHHHHHHHHHHTCCTTHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch--------------hhhhhhhccccccCChHHHHHH
Confidence 2345689999999999999887764 37999999999998751 0011000000 00 000 000
Q ss_pred ecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 221 FGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 221 ~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
+. .......+.+.+|+|+++.+++.... ....++++++.+|..
T Consensus 212 ~~------~~~p~~r~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 212 FA------KRITLGRLSEPEDVAACVSYLASPDS-DYMTGQSLLIDGGMV 254 (256)
T ss_dssp HH------TTCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESSSSS
T ss_pred HH------hcCCCCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCcc
Confidence 00 00011237899999999999987522 245789999987754
No 127
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.93 E-value=1.4e-25 Score=197.36 Aligned_cols=234 Identities=18% Similarity=0.152 Sum_probs=164.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC-CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN-LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++| +....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL----GAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999988 433333333333332 457888999999999998888632
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEecccccc-CCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAY-GWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~y-g~~~~~~~~e~~~~ 147 (347)
++|+|||+||...... ..+.+...+++|+.++.++++++... + ++||++||...+ . +.
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~-----------~~ 164 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMT-----------GI 164 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCC-----------SC
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccC-----------CC
Confidence 6999999999754322 23344678999999999999988764 4 699999998876 3 12
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCC--CCCCCCCcc-HHHHHHHHcCCCCceEEec
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGE--DPRGIPNNL-MPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~g 222 (347)
.+...|+.+|.++|.+++.++.+. .+++++++|||.++++....... .+....... .........
T Consensus 165 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 234 (274)
T 1ja9_A 165 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN---------- 234 (274)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH----------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh----------
Confidence 345679999999999999887764 38999999999998752100000 000000000 111111111
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
+.....+++++|+|+++.+++.... ....+++|++++|.
T Consensus 235 -------~~~~~~~~~~~dva~~i~~l~~~~~-~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 235 -------MNPLKRIGYPADIGRAVSALCQEES-EWINGQVIKLTGGG 273 (274)
T ss_dssp -------TSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred -------cCCCCCccCHHHHHHHHHHHhCccc-ccccCcEEEecCCc
Confidence 1122358899999999999987521 22467899998763
No 128
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.93 E-value=1.6e-25 Score=187.91 Aligned_cols=189 Identities=12% Similarity=0.091 Sum_probs=148.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~ 81 (347)
|+|+||||+|+||++++++|+ +|++|++++|+.. .+.+|++|.+++.+++++. ++|+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------------~~~~D~~~~~~~~~~~~~~~~~d~ 61 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------------DVTVDITNIDSIKKMYEQVGKVDA 61 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------------SEECCTTCHHHHHHHHHHHCCEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------------ceeeecCCHHHHHHHHHHhCCCCE
Confidence 589999999999999999999 9999999998643 3678999999999988753 4899
Q ss_pred EEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCCCCCchh
Q 040584 82 VIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYG 154 (347)
Q Consensus 82 vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~ 154 (347)
|||+||....... .+.+...+++|+.++.++++++... + ++||++||...+. +..+...|+
T Consensus 62 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~-----------~~~~~~~Y~ 129 (202)
T 3d7l_A 62 IVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMED-----------PIVQGASAA 129 (202)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTS-----------CCTTCHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcC-----------CCCccHHHH
Confidence 9999996543322 2334567789999999999998775 3 6999999987753 334567899
Q ss_pred hhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCcee
Q 040584 155 RSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233 (347)
Q Consensus 155 ~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 233 (347)
.+|.++|.+++.++.+. .+++++++||+.++++. . .... ....
T Consensus 130 ~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~---------------~----~~~~-----------------~~~~ 173 (202)
T 3d7l_A 130 MANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW---------------D----KLEP-----------------FFEG 173 (202)
T ss_dssp HHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH---------------H----HHGG-----------------GSTT
T ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEecCccCCch---------------h----hhhh-----------------hccc
Confidence 99999999999988764 48999999999999861 1 1111 1123
Q ss_pred eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEc
Q 040584 234 RDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265 (347)
Q Consensus 234 ~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv 265 (347)
+++++++|+|++++.++.. ...+++||+
T Consensus 174 ~~~~~~~dva~~~~~~~~~----~~~G~~~~v 201 (202)
T 3d7l_A 174 FLPVPAAKVARAFEKSVFG----AQTGESYQV 201 (202)
T ss_dssp CCCBCHHHHHHHHHHHHHS----CCCSCEEEE
T ss_pred cCCCCHHHHHHHHHHhhhc----cccCceEec
Confidence 4689999999999888843 456688887
No 129
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.93 E-value=2.8e-25 Score=193.28 Aligned_cols=223 Identities=18% Similarity=0.195 Sum_probs=161.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-------GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999998755443322221 236788999999999998887632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHH----HHHHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLE----VMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++..+++ .+++.+.++||++||...+. +..
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 146 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-----------GLA 146 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCC
Confidence 6999999999754322 234456788999999985544 45555677999999988763 234
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.+|.+.+.+++.++.+. .++++++++||.++++. ...........+.
T Consensus 147 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~------------------~~~~~~~~~~~~~------- 201 (254)
T 1hdc_A 147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM------------------TAETGIRQGEGNY------- 201 (254)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH------------------HHHHTCCCSTTSC-------
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc------------------ccccchhHHHHHH-------
Confidence 55789999999999999887764 37999999999998851 1111100000000
Q ss_pred CCCCceeeeee-eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 227 TKDGTVVRDYI-HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 227 ~~~~~~~~~~i-~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.......+. +.+|+|+++++++.... ....++++++.+|..
T Consensus 202 --~~~p~~~~~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 202 --PNTPMGRVGNEPGEIAGAVVKLLSDTS-SYVTGAELAVDGGWT 243 (254)
T ss_dssp --TTSTTSSCB-CHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTT
T ss_pred --hcCCCCCCCCCHHHHHHHHHHHhCchh-cCCCCCEEEECCCcc
Confidence 001112367 89999999999987522 245689999987753
No 130
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.93 E-value=2.8e-25 Score=193.76 Aligned_cols=235 Identities=14% Similarity=0.159 Sum_probs=165.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch--hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (347)
|+|+++||||+|+||++++++|+++|++|++++|+... .....+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA----ADQKAVFVGLDVTDKANFDSAIDEAA 76 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 67899999999999999999999999999999987665 3333333332 1357888999999999998887632
Q ss_pred ----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCC-CeEEEeccccccCCCCCCCCCCC
Q 040584 78 ----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGC-KNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 ----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+. ++||++||...+.
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 146 (258)
T 3a28_C 77 EKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ---------- 146 (258)
T ss_dssp HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS----------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc----------
Confidence 6999999999754332 2344567899999999999887664 355 7999999987752
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHH--cCC--CCce
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA--VGR--RPAL 218 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~ 218 (347)
+..+...|+.||.+.+.+.+.++.++ .++++++++||.+..+. ......... .+. ....
T Consensus 147 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~--------------~~~~~~~~~~~~~~~~~~~~ 211 (258)
T 3a28_C 147 -GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM--------------WEQIDAELSKINGKPIGENF 211 (258)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH--------------HHHHHHHHHHHHCCCTTHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh--------------hhhhhhhhccccCCchHHHH
Confidence 33445789999999999999887764 37999999999987651 000010000 000 0000
Q ss_pred EEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 219 TVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 219 ~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
..+. .......+.+.+|+|+++.+++.... ....++++++.+|..+
T Consensus 212 ~~~~------~~~p~~r~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 212 KEYS------SSIALGRPSVPEDVAGLVSFLASENS-NYVTGQVMLVDGGMLY 257 (258)
T ss_dssp HHHH------TTCTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESSSSCC
T ss_pred HHHH------hcCCCCCccCHHHHHHHHHHHhCccc-CCCCCCEEEECCCEec
Confidence 0000 00011237899999999999987522 2457899999887543
No 131
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.93 E-value=6.9e-25 Score=188.69 Aligned_cols=202 Identities=16% Similarity=0.036 Sum_probs=140.5
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|||+||||||+|+||++++++|+++| ++|+++.|++.+.... ...++.++.+|++|.+++.++++ ++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~--~~ 89 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP----------YPTNSQIIMGDVLNHAALKQAMQ--GQ 89 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS----------CCTTEEEEECCTTCHHHHHHHHT--TC
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc----------ccCCcEEEEecCCCHHHHHHHhc--CC
Confidence 46889999999999999999999999 9999999986653211 13478899999999999999999 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCC--CCCCCCCCCCCchhhhH
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVP--CTEEFPLQAMNPYGRSK 157 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~--~~e~~~~~~~~~Y~~sK 157 (347)
|+|||+|+... ....+.++++++++.++++||++||..+|+...... ..+..+.. +...+
T Consensus 90 D~vv~~a~~~~--------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~----~~~~~ 151 (236)
T 3qvo_A 90 DIVYANLTGED--------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGE----PLKPF 151 (236)
T ss_dssp SEEEEECCSTT--------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CG----GGHHH
T ss_pred CEEEEcCCCCc--------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccc----hHHHH
Confidence 99999998521 113466899999999999999999999997543321 22222222 33334
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeee
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYI 237 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 237 (347)
..+|..++ . .+++++++||+.++++....+ ... .. .......++
T Consensus 152 ~~~~~~l~----~-~gi~~~~vrPg~i~~~~~~~~------------------------~~~-~~------~~~~~~~~i 195 (236)
T 3qvo_A 152 RRAADAIE----A-SGLEYTILRPAWLTDEDIIDY------------------------ELT-SR------NEPFKGTIV 195 (236)
T ss_dssp HHHHHHHH----T-SCSEEEEEEECEEECCSCCCC------------------------EEE-CT------TSCCSCSEE
T ss_pred HHHHHHHH----H-CCCCEEEEeCCcccCCCCcce------------------------EEe-cc------CCCCCCcEE
Confidence 45555543 2 389999999999998631100 000 00 001113589
Q ss_pred eHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 238 HVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 238 ~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
+++|+|+++++++.... ...+++|++++++.
T Consensus 196 ~~~DvA~~i~~ll~~~~--~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 196 SRKSVAALITDIIDKPE--KHIGENIGINQPGT 226 (236)
T ss_dssp EHHHHHHHHHHHHHSTT--TTTTEEEEEECSSC
T ss_pred CHHHHHHHHHHHHcCcc--cccCeeEEecCCCC
Confidence 99999999999998722 25689999988763
No 132
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.93 E-value=5.7e-25 Score=191.45 Aligned_cols=231 Identities=18% Similarity=0.135 Sum_probs=163.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+.. ....+.+... +.++.++.+|++|.+++.++++..
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH----GVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT----SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc----CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999998765 2233333221 346788999999999999888632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++ ++.+.++||++||...+. +..
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 146 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV-----------GST 146 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc-----------CCC
Confidence 5999999999754322 23345678999999877776654 556677999999988763 223
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHH-HHHcCCCC--ceEEe-c
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVT-QVAVGRRP--ALTVF-G 222 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~-g 222 (347)
....|+.+|.+.+.+.+.++.+. .++++++++||.+++|. ...... ....+... ....+ .
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
T 2q2v_A 147 GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL--------------VQKQIDDRAANGGDPLQAQHDLLA 212 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH--------------HHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc--------------hhhhcccccccccchHHHHHHHHh
Confidence 45689999999999999988875 37999999999999861 011110 00000000 00000 0
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.......+++++|+|+++.+++.... ....+++|++.+|..
T Consensus 213 ------~~~p~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 213 ------EKQPSLAFVTPEHLGELVLFLCSEAG-SQVRGAAWNVDGGWL 253 (255)
T ss_dssp ------TTCTTCCCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTGG
T ss_pred ------ccCCCCCCcCHHHHHHHHHHHhCCcc-CCCCCCEEEECCCcc
Confidence 11122358899999999999886522 235689999987753
No 133
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.93 E-value=3.8e-25 Score=193.64 Aligned_cols=223 Identities=18% Similarity=0.204 Sum_probs=164.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+........+.+ +.++.++.+|++|.+++.++++..
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-------GNNCVFAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 378999999999999999999999999999999877655444332 347889999999999999888632
Q ss_pred -CCcEEEEccccccCCc----------cccCcchhhhhhhhHHHHHHHHHHHc----------CCCeEEEeccccccCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----------SVQKPLPYFDNNLTGTITLLEVMAAH----------GCKNLVFSSSATAYGWP 136 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~yg~~ 136 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-- 162 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-- 162 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH--
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC--
Confidence 6999999999754321 22345678899999999999987764 557999999988763
Q ss_pred CCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCC
Q 040584 137 KVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGR 214 (347)
Q Consensus 137 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (347)
+..+...|+.+|.+.+.+++.++.+. .++++++++||.+.++.... .... ........
T Consensus 163 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~---~~~~~~~~- 222 (265)
T 2o23_A 163 ---------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-------LPEK---VCNFLASQ- 222 (265)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------CHHHHT-
T ss_pred ---------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-------cCHH---HHHHHHHc-
Confidence 33456789999999999998887764 37999999999998762110 0000 00011110
Q ss_pred CCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 215 RPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
.+ . ...+++.+|+|+++++++.+ +...++++++.+|..+
T Consensus 223 ---~~---------~---~~~~~~~~dva~~~~~l~~~---~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 223 ---VP---------F---PSRLGDPAEYAHLVQAIIEN---PFLNGEVIRLDGAIRM 261 (265)
T ss_dssp ---CS---------S---SCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCC
T ss_pred ---CC---------C---cCCCCCHHHHHHHHHHHhhc---CccCceEEEECCCEec
Confidence 00 0 02367899999999999875 4567899999887644
No 134
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.93 E-value=2.5e-25 Score=196.24 Aligned_cols=238 Identities=16% Similarity=0.173 Sum_probs=168.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc------------hhHHHHHHHHHhhccCCCCeEEEecCCCCHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN------------ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAA 69 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (347)
+|+++||||+|+||++++++|+++|++|++++|+.. ......+.+... +.++.++.+|++|.++
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRDRES 88 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTCHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCCHHH
Confidence 478999999999999999999999999999998732 222222222222 4588999999999999
Q ss_pred HHHHHccC-----CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCC
Q 040584 70 LEVVFAGT-----KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVV 139 (347)
Q Consensus 70 ~~~~~~~~-----~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~ 139 (347)
+.++++.. ++|+||||||........+.+...+++|+.++.++++++.. .+ .++||++||...+....
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 166 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-- 166 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC--
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc--
Confidence 99888642 69999999998665445566778999999999999887643 23 46999999987753210
Q ss_pred CCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHHHHHcCCCC
Q 040584 140 PCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVTQVAVGRRP 216 (347)
Q Consensus 140 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 216 (347)
.+..+...|+.||.+.+.+++.++.++ .++++.+++||.+.+|.. ..... ..+........
T Consensus 167 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~----------~~~~~~~~~~~~~~~~~- 230 (278)
T 3sx2_A 167 -----SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI----------NNEFTREWLAKMAAATD- 230 (278)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT----------SSHHHHHHHHHHHHHCC-
T ss_pred -----cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc----------hhhhHHHHHhhccchhh-
Confidence 112334679999999999999888775 379999999999998621 11111 12222111110
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....++ .... ..+++++|+|+++++++.... ....|+++++.+|.
T Consensus 231 ~~~~~~------~~~p-~~~~~p~dvA~~v~~l~s~~~-~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 231 TPGAMG------NAMP-VEVLAPEDVANAVAWLVSDQA-RYITGVTLPVDAGF 275 (278)
T ss_dssp --CTTS------CSSS-CSSBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTT
T ss_pred hhhhhh------hhcC-cCcCCHHHHHHHHHHHhCccc-ccccCCEEeECCCc
Confidence 011111 1222 568899999999999887522 34678999998775
No 135
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.93 E-value=2.3e-25 Score=197.54 Aligned_cols=229 Identities=17% Similarity=0.115 Sum_probs=170.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+... ...++.++.+|++|.+++.++++..
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL---GAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS---SSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh---CCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999887776655555432 1247889999999999988887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||...+. .+..
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~~ 187 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGYP 187 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCCC
Confidence 6899999999765432 33455678999999999998886 355667999999986531 1233
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.||.+.+.+++.++.++ .++++.+++||.+++|... .....+........ +
T Consensus 188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~----------~~~~~~~~~~~~~~--p--------- 246 (293)
T 3rih_A 188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV----------DMGEEYISGMARSI--P--------- 246 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH----------HTCHHHHHHHHTTS--T---------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh----------hccHHHHHHHHhcC--C---------
Confidence 55789999999999999888774 3899999999999986200 00111222222211 1
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
...+...+|+|+++.+++... .....|+++++.+|..+
T Consensus 247 ------~~r~~~p~dvA~~v~fL~s~~-a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 247 ------MGMLGSPVDIGHLAAFLATDE-AGYITGQAIVVDGGQVL 284 (293)
T ss_dssp ------TSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTTTC
T ss_pred ------CCCCCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCccC
Confidence 112567899999999998752 23467899999888654
No 136
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.93 E-value=1.5e-25 Score=195.04 Aligned_cols=231 Identities=16% Similarity=0.112 Sum_probs=170.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999765544433332 247889999999999998877532
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMN 151 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~ 151 (347)
++|+||||||...... +.+.+...+++|+.++.++++++... ..++||++||...+. +..+..
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~ 150 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG-----------GHPGMS 150 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS-----------BCTTBH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC-----------CCCCch
Confidence 6999999999765433 33455678999999999999998764 234899999988763 334567
Q ss_pred chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHH-HHHHcCCCCceEEecccCCCC
Q 040584 152 PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFV-TQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 228 (347)
.|+.||.+.+.+.+.++.++ .++++.+++||.+..|.... ........... .......
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~~~~~~~~~~-------------- 211 (255)
T 4eso_A 151 VYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV-----AGITEAERAEFKTLGDNIT-------------- 211 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC-----TTSCHHHHHHHHHHHHHHS--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc-----ccCChhhHHHHHHHHhccC--------------
Confidence 89999999999999988875 37999999999999863111 01111111111 1111110
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
....+.+.+|+|+++++++.. .....|+++++.+|...++.+
T Consensus 212 ---p~~r~~~pedvA~~v~~L~s~--~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 212 ---PMKRNGTADEVARAVLFLAFE--ATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp ---TTSSCBCHHHHHHHHHHHHHT--CTTCCSCEEEESTTTTTTBCC
T ss_pred ---CCCCCcCHHHHHHHHHHHcCc--CcCccCCEEEECCCccccCcC
Confidence 112356899999999998875 335678999999887766543
No 137
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.93 E-value=2.9e-25 Score=193.80 Aligned_cols=219 Identities=16% Similarity=0.175 Sum_probs=161.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+ ..++.++.+|++|.+++.++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-------ADAARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-------GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------hcCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999998765444332222 124778899999999999888632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHH----HHHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEV----MAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.+++++ +++.+.++||++||...+. +..
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 148 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA-----------GTV 148 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC-----------CCC
Confidence 5999999999754322 2334567899999999766554 4455677999999998763 233
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.+|.+.+.+++.++.+. .+++++++|||.++++... .. .. .+. .
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--------~~------------~~--~~~--~---- 200 (260)
T 1nff_A 149 ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--------WV------------PE--DIF--Q---- 200 (260)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--------TS------------CT--TCS--C----
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--------cc------------hh--hHH--h----
Confidence 45689999999999999887763 3899999999999987310 00 00 000 0
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
.....+++++|+|+++.+++.... ....+++|++.+|...
T Consensus 201 ----~~~~~~~~~~dvA~~v~~l~s~~~-~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 201 ----TALGRAAEPVEVSNLVVYLASDES-SYSTGAEFVVDGGTVA 240 (260)
T ss_dssp ----CSSSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred ----CccCCCCCHHHHHHHHHHHhCccc-cCCcCCEEEECCCeec
Confidence 011236789999999999987522 2356799999887643
No 138
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.93 E-value=3.4e-25 Score=191.90 Aligned_cols=217 Identities=14% Similarity=0.089 Sum_probs=161.5
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+++||||+|+||++++++|+++|++|++++|+........+. ..+..++.+|++|.+++.++++..
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--------RPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--------CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------cccCCeEEeeCCCHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999875544332211 235678999999999999888642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++... +.++||++||...+. +..
T Consensus 73 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 141 (247)
T 3dii_A 73 LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ-----------SEP 141 (247)
T ss_dssp HSCCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS-----------CCT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEcchhhcC-----------CCC
Confidence 6999999999765432 23455678999999999999887653 245999999998763 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
....|+.||.+.+.+++.++.++ +.+.+.++.||.+..+.. ..+.. ......
T Consensus 142 ~~~~Y~asKaa~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~-----------~~~~~---~~~~~~------------- 194 (247)
T 3dii_A 142 DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQ-----------QEFTQ---EDCAAI------------- 194 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------------CCH---HHHHTS-------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEEeCccCCcch-----------hhHHH---HHHhcC-------------
Confidence 55689999999999999998875 348999999998876521 01111 111111
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+...+|+|+++.+++.. +...|+.+++.+|..
T Consensus 195 ----p~~r~~~p~dva~~v~~l~~~---~~itG~~i~vdGG~~ 230 (247)
T 3dii_A 195 ----PAGKVGTPKDISNMVLFLCQQ---DFITGETIIVDGGMS 230 (247)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHTC---SSCCSCEEEESTTGG
T ss_pred ----CCCCCcCHHHHHHHHHHHHcC---CCCCCcEEEECCCcc
Confidence 011367899999999999944 456789999987753
No 139
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.93 E-value=5.3e-25 Score=191.72 Aligned_cols=229 Identities=16% Similarity=0.144 Sum_probs=162.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+... ....+.+ . . .++.+|++|.+++.++++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-------~-~-~~~~~D~~~~~~~~~~~~~~~~~~ 75 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-------G-G-AFFQVDLEDERERVRFVEEAAYAL 75 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-------T-C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-------h-C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999999998765 4333322 1 3 67899999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~ 144 (256)
T 2d1y_A 76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF-----------AEQ 144 (256)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------BCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC-----------CCC
Confidence 6899999999764332 2234467889999999999887653 4567999999987652 233
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.||.+.+.+++.++.+. .++++++++||.+.++. ....+....... .....+.
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~--------------~~~~~~~~~~~~-~~~~~~~---- 205 (256)
T 2d1y_A 145 ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA--------------VLEAIALSPDPE-RTRRDWE---- 205 (256)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--------------HHHHHC---------CHHHH----
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch--------------hhhccccccCCH-HHHHHHH----
Confidence 45689999999999999888764 37999999999887641 000100000000 0000000
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
.......+++++|+|+++++++.... ....+++|++.+|...+.
T Consensus 206 --~~~~~~~~~~~~dvA~~~~~l~s~~~-~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 206 --DLHALRRLGKPEEVAEAVLFLASEKA-SFITGAILPVDGGMTASF 249 (256)
T ss_dssp --TTSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGBC
T ss_pred --hcCCCCCCcCHHHHHHHHHHHhCchh-cCCCCCEEEECCCccccc
Confidence 11123458899999999999987622 235678999988876554
No 140
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.93 E-value=6e-26 Score=199.10 Aligned_cols=226 Identities=14% Similarity=0.062 Sum_probs=168.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++..+.+|++|.+++.++++..
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA----GLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999999999999876665555555443 347788999999999999887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 172 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA-----------GNP 172 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------CCC
Confidence 6999999999765432 334556789999999999988765 33456999999987752 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 225 (347)
....|+.||.+.+.+.+.++.++ .++++.+++||.+..+.. ..+.. ....... .
T Consensus 173 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~~~~~~~~-~----------- 229 (270)
T 3ftp_A 173 GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMT-----------KGLPQEQQTALKT-Q----------- 229 (270)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHH-----------HHSCHHHHHHHHT-T-----------
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcch-----------hhcCHHHHHHHHh-c-----------
Confidence 55789999999999999888774 379999999999887510 00111 1111111 1
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
.....+.+.+|+|+++.+++... .....|+++++.+|..+
T Consensus 230 -----~p~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 230 -----IPLGRLGSPEDIAHAVAFLASPQ-AGYITGTTLHVNGGMFM 269 (270)
T ss_dssp -----CTTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSSC
T ss_pred -----CCCCCCCCHHHHHHHHHHHhCCC-cCCccCcEEEECCCccc
Confidence 11224678999999999988642 23467899999888654
No 141
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.93 E-value=1.7e-25 Score=194.95 Aligned_cols=227 Identities=14% Similarity=0.132 Sum_probs=165.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCC-CchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNL-DNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+ ....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD----GGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998 55555444444332 347889999999999999888632
Q ss_pred --CCcEEEEcccc-ccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC--C---CeEEEeccccccCCCCCCCC
Q 040584 78 --KFDAVIHFAGL-KAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG--C---KNLVFSSSATAYGWPKVVPC 141 (347)
Q Consensus 78 --~~d~vih~a~~-~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~---~~iv~~SS~~~yg~~~~~~~ 141 (347)
++|+|||+||. ..... ..+.+...+++|+.++.++++++.. .+ . ++||++||...+..
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------ 156 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG------ 156 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC------
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC------
Confidence 59999999996 33222 2233456889999999998886542 22 2 69999999877631
Q ss_pred CCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceE
Q 040584 142 TEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALT 219 (347)
Q Consensus 142 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (347)
+..+...|+.+|.+.|.+++.++.+. .+++++++|||.++++... . ....+...+..+.
T Consensus 157 ----~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~-------~---~~~~~~~~~~~~~----- 217 (258)
T 3afn_B 157 ----GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHA-------D---KTQDVRDRISNGI----- 217 (258)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGT-------T---CCHHHHHHHHTTC-----
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccc-------c---cCHHHHHHHhccC-----
Confidence 23356789999999999999887664 3799999999999987311 0 0112233333221
Q ss_pred EecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 220 VFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 220 ~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++++|+|+++.+++.........+++|++++|.
T Consensus 218 ------------~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 218 ------------PMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp ------------TTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred ------------CCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 12247899999999999887521103467999998775
No 142
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.93 E-value=9.9e-26 Score=194.99 Aligned_cols=225 Identities=12% Similarity=0.062 Sum_probs=160.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEE-EecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTF-HKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~~~~~~~~~-- 77 (347)
||+|+||||+|+||++++++|+++|++|+++ +|+....+...+.+... +.++.. +.+|++|.+++.+++++.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR----GSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT----TCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988 77655544443433332 345666 899999999998886531
Q ss_pred ---CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHH----HHHHcCCCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLE----VMAAHGCKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+|||+||...... ..+.+...+++|+.++.++++ .+++.+.++||++||...+. +
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~ 145 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL-----------G 145 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------C
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc-----------C
Confidence 6999999999754322 233456788999999665554 45556778999999986542 2
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
..+...|+.+|.+.+.+++.++.+. .+++++++|||.++++... .. ............
T Consensus 146 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~~---~~~~~~~~~~~~---------- 205 (245)
T 2ph3_A 146 NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE-------RL---PQEVKEAYLKQI---------- 205 (245)
T ss_dssp CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------TS---CHHHHHHHHHTC----------
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchh-------hc---CHHHHHHHHhcC----------
Confidence 2345689999999999998887764 3799999999999986210 00 011222222211
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++++|+|+++..++.... ....+++|++.+|.
T Consensus 206 -------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 206 -------PAGRFGRPEEVAEAVAFLVSEKA-GYITGQTLCVDGGL 242 (245)
T ss_dssp -------TTCSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTC
T ss_pred -------CCCCCcCHHHHHHHHHHHhCccc-ccccCCEEEECCCC
Confidence 11247899999999999887521 23467899998764
No 143
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.93 E-value=4.6e-25 Score=194.16 Aligned_cols=231 Identities=17% Similarity=0.076 Sum_probs=166.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-------GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-------CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999998766554433332 357889999999999998887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~ 170 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-----------AVG 170 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CCC
Confidence 6999999999764432 3345667899999999999887654 4556999999987752 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceE-EecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALT-VFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ 225 (347)
+...|+.||.+.+.+++.++.+. .++++.+++||.+++|. ............. ......
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~------------------~~~~~~~~~~~~~~~~~~~~ 232 (277)
T 3gvc_A 171 GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM------------------QQTAMAMFDGALGAGGARSM 232 (277)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH------------------HHHHHTCC------CCHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch------------------HHHhhhcchhhHHHHhhhhh
Confidence 56789999999999999888774 37999999999998761 1111100000000 000000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.......+.+.+|+|+++++++.... ....|+++++.+|...+
T Consensus 233 ---~~~~~~r~~~pedvA~~v~~L~s~~a-~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 233 ---IARLQGRMAAPEEMAGIVVFLLSDDA-SMITGTTQIADGGTIAA 275 (277)
T ss_dssp ---HHHHHSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGS
T ss_pred ---hhccccCCCCHHHHHHHHHHHcCCcc-CCccCcEEEECCcchhc
Confidence 00112246789999999999997522 34678999998886544
No 144
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.93 E-value=7.8e-25 Score=191.20 Aligned_cols=224 Identities=15% Similarity=0.061 Sum_probs=163.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC-CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN-LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
|+|+||||+|+||++++++|+++|++|++++| +....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV----GGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999999998 544443333444332 346788999999999998887632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+ .++||++||...+. +.
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 152 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PW 152 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CC
Confidence 6999999999754322 2334567889999999988777554 34 56999999987652 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH--H-HHHHHHcCCCCceEEec
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM--P-FVTQVAVGRRPALTVFG 222 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~g 222 (347)
.+...|+.+|.+.+.+++.++.+. .+++++++|||.+++|.. .... + ....+...
T Consensus 153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~~~~~~~~~~~--------- 212 (261)
T 1gee_A 153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN-----------AEKFADPEQRADVESM--------- 212 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG-----------HHHHHSHHHHHHHHTT---------
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchh-----------hhcccChhHHHHHHhc---------
Confidence 566789999999999998887664 379999999999998620 0010 1 11111111
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.....+++++|+|+++++++.... ....++++++.++..
T Consensus 213 --------~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 213 --------IPMGYIGEPEEIAAVAAWLASSEA-SYVTGITLFADGGMT 251 (261)
T ss_dssp --------CTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred --------CCCCCCcCHHHHHHHHHHHhCccc-cCCCCcEEEEcCCcc
Confidence 011247899999999999986522 235678999988754
No 145
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.93 E-value=8.4e-25 Score=192.29 Aligned_cols=232 Identities=14% Similarity=0.086 Sum_probs=164.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc-----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----- 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 76 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++.
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK----GLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999866554444444332 34788899999999999888742
Q ss_pred -CCCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 77 -TKFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 77 -~~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
.++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~ 165 (273)
T 1ae1_A 97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-----------AL 165 (273)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-----------CC
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC-----------CC
Confidence 26999999999754332 233456688899999999988764 44567999999998874 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.+|.+.+.+.+.++.+. .++++++++||.+++|...... ..... ............
T Consensus 166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~-~~~~~~~~~~~~----------- 230 (273)
T 1ae1_A 166 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPH-QKEEIDNFIVKT----------- 230 (273)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------CHHHHHHHHHHS-----------
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh---hcccC-cHHHHHHHHhcC-----------
Confidence 455789999999999999887764 3899999999999987311100 00000 011112221110
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+.+.+|+|+++.+++... .....++++++.+|..
T Consensus 231 ------p~~r~~~p~dvA~~v~~l~s~~-~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 231 ------PMGRAGKPQEVSALIAFLCFPA-ASYITGQIIWADGGFT 268 (273)
T ss_dssp ------TTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred ------CCCCCcCHHHHHHHHHHHhCcc-ccCcCCCEEEECCCcc
Confidence 0113678999999999988652 2235789999987754
No 146
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.93 E-value=2.5e-25 Score=196.15 Aligned_cols=235 Identities=14% Similarity=0.063 Sum_probs=167.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA----GHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999876665555554432 457889999999999998887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH------cCCCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA------HGCKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-----------~ 168 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-----------G 168 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-----------C
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-----------C
Confidence 6899999999765433 2234556788999999999987654 4567999999988762 3
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 223 (347)
......|+.||.+.+.+++.++.+. .++++.+++||.+.+|.................+ .......
T Consensus 169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 237 (279)
T 3sju_A 169 VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA----------- 237 (279)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT-----------
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh-----------
Confidence 4456789999999999999988874 3799999999998875100000000000000011 1111111
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
......+.+++|+|+++.+++.... ....|+++++.+|.
T Consensus 238 ------~~p~~r~~~pedvA~~v~~L~s~~a-~~itG~~i~vdGG~ 276 (279)
T 3sju_A 238 ------KIPLGRYSTPEEVAGLVGYLVTDAA-ASITAQALNVCGGL 276 (279)
T ss_dssp ------TCTTSSCBCHHHHHHHHHHHTSSGG-GGCCSCEEEESTTC
T ss_pred ------cCCCCCCCCHHHHHHHHHHHhCccc-cCcCCcEEEECCCc
Confidence 1112346789999999999887521 23678999998775
No 147
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.93 E-value=4.3e-25 Score=191.34 Aligned_cols=221 Identities=13% Similarity=0.044 Sum_probs=165.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+. .....+.+|++|.+++.++++..
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-------DNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-------GGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------ccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 789999999999999999999999999999988665544443332 25678899999999999888643
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... +.+++...+++|+.++.++++++.. .+.++||++||...+. +..+
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~ 151 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM-----------GNAG 151 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CCTT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------CCCC
Confidence 6999999999765432 3345567899999999999887653 4567999999987652 3445
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.||.+.+.+.+.++.++ .++++.+++||.+..+.. ..+.+ .........
T Consensus 152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------~~~~~~~~~~~~~~~------------ 208 (248)
T 3op4_A 152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT-----------KALNDEQRTATLAQV------------ 208 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTT-----------TTSCHHHHHHHHHTC------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchh-----------hhcCHHHHHHHHhcC------------
Confidence 6789999999999999888764 379999999999987621 11111 222222211
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+.+++|+|+++.+++... .....|+++++.+|..
T Consensus 209 -----p~~r~~~p~dva~~v~~L~s~~-~~~itG~~i~vdgG~~ 246 (248)
T 3op4_A 209 -----PAGRLGDPREIASAVAFLASPE-AAYITGETLHVNGGMY 246 (248)
T ss_dssp -----TTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSS
T ss_pred -----CCCCCcCHHHHHHHHHHHcCCc-cCCccCcEEEECCCee
Confidence 1123678999999999988752 2345789999987753
No 148
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.4e-24 Score=188.89 Aligned_cols=232 Identities=16% Similarity=0.098 Sum_probs=165.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (347)
|+|+++||||+|+||++++++|+++| +.|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-------GDRFFYVVGDITEDSVLKQLVNAAV 73 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-------GGGEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-------CCceEEEECCCCCHHHHHHHHHHHH
Confidence 88999999999999999999999985 78888888765544433332 247889999999999999888643
Q ss_pred ----CCcEEEEccccccC-C----ccccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 ----KFDAVIHFAGLKAV-G----ESVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 ----~~d~vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||.... . .+.+++...+++|+.++.++++++ ++.+ ++||++||...+.
T Consensus 74 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~---------- 142 (254)
T 3kzv_A 74 KGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM---------- 142 (254)
T ss_dssp HHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC----------
T ss_pred HhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc----------
Confidence 69999999997432 1 133455678999999999998887 4444 6999999987752
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecc
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 223 (347)
+..+...|+.||.+.+.+.+.++.+..++++.+++||.+..+-......... .....+ ........
T Consensus 143 -~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~---------- 209 (254)
T 3kzv_A 143 -YFSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVG--PSSMSAEQLKMFRGL---------- 209 (254)
T ss_dssp -SSCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCC--TTTSCHHHHHHHHHH----------
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccC--ccccCHHHHHHHHHH----------
Confidence 3445678999999999999999988779999999999998874322211100 000111 22222111
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.....+.+.+|+|+++++++.........|+.+++.+++.
T Consensus 210 -------~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~ 249 (254)
T 3kzv_A 210 -------KENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL 249 (254)
T ss_dssp -------HTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred -------HhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence 0112367899999999999987321236789999877653
No 149
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.93 E-value=1.9e-25 Score=195.42 Aligned_cols=221 Identities=17% Similarity=0.094 Sum_probs=161.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+. + ..++.++.+|++|.+++.++++..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG---L----ENGGFAVEVDVTKRASVDAAMQKAIDALG 85 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---C----TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---H----hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999999875443322211 1 126778999999999999888632
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+ .++||++||...+. +..
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 154 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV-----------GAP 154 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCT
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc-----------CCC
Confidence 5999999999754332 2334567889999999999887654 34 57999999987752 233
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH-----------H-HHHHHHcCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-----------P-FVTQVAVGR 214 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~ 214 (347)
+...|+.+|.+.+.+++.++.+. .+++++++|||.+++|.. .... + ........
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~- 222 (263)
T 3ak4_A 155 LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQ-----------EREIIWEAELRGMTPEAVRAEYVSL- 222 (263)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHH-----------HHHHHHHHHHHTSCHHHHHHHHHHT-
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhh-----------hhhccccccccccCcHHHHHHHHhc-
Confidence 45789999999999999887764 389999999999998610 0000 0 01111110
Q ss_pred CCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 215 RPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.....+++++|+|+++++++.... ....+++|++.+|..
T Consensus 223 ----------------~p~~~~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 223 ----------------TPLGRIEEPEDVADVVVFLASDAA-RFMTGQGINVTGGVR 261 (263)
T ss_dssp ----------------CTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESSSSS
T ss_pred ----------------CCCCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEECcCEe
Confidence 112347899999999999987522 235778999988754
No 150
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.93 E-value=1.4e-24 Score=189.31 Aligned_cols=219 Identities=12% Similarity=0.052 Sum_probs=161.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+.... +... ++.++.+|++|.+++.++++..
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA------GAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH------TCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc------CCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 37899999999999999999999999999999987654322 2222 4788999999999999888642
Q ss_pred -CCcEEEEccccccCCc---cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE---SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +..+
T Consensus 98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~ 166 (260)
T 3gem_A 98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK-----------GSSK 166 (260)
T ss_dssp SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT-----------CCSS
T ss_pred CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC-----------CCCC
Confidence 6999999999754322 2234456899999999999887654 3557999999988762 3445
Q ss_pred CCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
...|+.||.+.+.+++.++.++ +++++.+++||.+..+.. .. ..........
T Consensus 167 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~-----~~-------~~~~~~~~~~--------------- 219 (260)
T 3gem_A 167 HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPK-----DD-------AAYRANALAK--------------- 219 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------------------------------
T ss_pred cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCC-----CC-------HHHHHHHHhc---------------
Confidence 6789999999999999998886 459999999999987521 00 0011111110
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
....-+..++|+|++++++++. +...|++|++.+|..++
T Consensus 220 --~p~~r~~~~edva~~v~~L~~~---~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 220 --SALGIEPGAEVIYQSLRYLLDS---TYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp --CCSCCCCCTHHHHHHHHHHHHC---SSCCSCEEEESTTTTTC
T ss_pred --CCCCCCCCHHHHHHHHHHHhhC---CCCCCCEEEECCCcccC
Confidence 1111245689999999999854 45788999998887654
No 151
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.93 E-value=6.3e-25 Score=192.40 Aligned_cols=227 Identities=15% Similarity=0.112 Sum_probs=166.2
Q ss_pred CceEEEEcCCC-cccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVG-YIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG-~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+| .||++++++|+++|++|++++|+........+.+... ...++.++.+|++|.+++.++++..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL---GLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---CSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---CCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 37899999998 5999999999999999999999877665555554332 2357899999999999999888643
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc-----CCCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH-----GCKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+. +
T Consensus 99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~ 167 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-----------A 167 (266)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-----------C
T ss_pred hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-----------C
Confidence 6899999999755433 23345668999999999998887653 456899999987752 4
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
..+...|+.+|.+.+.+++.++.+. .++++.+++||.+..+..... . .........
T Consensus 168 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~--~~~~~~~~~------------- 225 (266)
T 3o38_A 168 QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT-------S--SSELLDRLA------------- 225 (266)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------------------
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc-------C--cHHHHHHHH-------------
Confidence 4566789999999999999888773 379999999999887521000 0 000011110
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.......+.+.+|+|+++++++.... ....|+++++.+|.
T Consensus 226 ----~~~~~~r~~~~~dva~~i~~l~s~~~-~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 226 ----SDEAFGRAAEPWEVAATIAFLASDYS-SYMTGEVVSVSSQR 265 (266)
T ss_dssp -----CCTTSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESSCC
T ss_pred ----hcCCcCCCCCHHHHHHHHHHHcCccc-cCccCCEEEEcCCc
Confidence 11223347899999999999987622 34678999998774
No 152
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.93 E-value=5.4e-25 Score=194.74 Aligned_cols=224 Identities=12% Similarity=0.066 Sum_probs=162.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||+++++.|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF----GYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc----CCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999888755544444443322 347888999999999999887532
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~ 188 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT-----------GNV 188 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CCT
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------CCC
Confidence 6999999999764322 233456789999999888877654 44667999999987652 223
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 225 (347)
+...|+.+|.+.+.+++.++.+. .++++++++||.+.++... .+.+ .........
T Consensus 189 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~~~----------- 246 (285)
T 2c07_A 189 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-----------KISEQIKKNIISNI----------- 246 (285)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------CCHHHHHHHHTTC-----------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh-----------hcCHHHHHHHHhhC-----------
Confidence 45689999999999998887664 3799999999999886210 1111 222222110
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++++|+|+++++++.... ....+++|++.+|.
T Consensus 247 ------~~~~~~~~~dvA~~~~~l~~~~~-~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 247 ------PAGRMGTPEEVANLACFLSSDKS-GYINGRVFVIDGGL 283 (285)
T ss_dssp ------TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred ------CCCCCCCHHHHHHHHHHHhCCCc-CCCCCCEEEeCCCc
Confidence 01137899999999999987522 23567899998774
No 153
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.93 E-value=8.5e-25 Score=191.30 Aligned_cols=232 Identities=13% Similarity=0.110 Sum_probs=168.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT----GRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999876666555555443 457889999999999998887643
Q ss_pred -CCcEEEEcccccc-CCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKA-VGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~-~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||... ... +.+.+...+++|+.++.++++++.. .+ ++||++||...+. +.
T Consensus 87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~ 154 (264)
T 3ucx_A 87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH-----------SQ 154 (264)
T ss_dssp SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC-----------CC
T ss_pred CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc-----------CC
Confidence 6999999998642 211 2345567899999999999887543 33 6999999988762 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHH--cCCC--CceEEe
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA--VGRR--PALTVF 221 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~ 221 (347)
.....|+.||.+.+.+++.++.++ .++++.+++||.+++|. ...+..... .+.. .....+
T Consensus 155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 220 (264)
T 3ucx_A 155 AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT--------------LKSYFEHQAGKYGTSVEDIYNAA 220 (264)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH--------------HHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc--------------HHHHHHhhhhhcCCCHHHHHHHH
Confidence 456789999999999999888774 47999999999998861 111111000 0000 000000
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
. .......+.+++|+|+++++++.... ....|+++++.+|..
T Consensus 221 ~------~~~p~~r~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 221 A------AGSDLKRLPTEDEVASAILFMASDLA-SGITGQALDVNCGEY 262 (264)
T ss_dssp H------TTSSSSSCCBHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSS
T ss_pred h------ccCCcccCCCHHHHHHHHHHHcCccc-cCCCCCEEEECCCcc
Confidence 0 11223357899999999999987522 346789999988864
No 154
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.93 E-value=2e-24 Score=187.84 Aligned_cols=225 Identities=13% Similarity=0.057 Sum_probs=160.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCe-EEEecCCCCHHHHHHHHcc----C
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNM-TFHKLDLRDKAALEVVFAG----T 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~----~ 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++ .++.+|++|.+++.++++. .
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-------GAAVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 68999999999999999999999999999999765444333332 1245 7889999999999888753 2
Q ss_pred CCcEEEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+|||+||....... .+.+...+++|+.++.++++++ ++.+.++||++||...+... +..+
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~ 155 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQF 155 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSC
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCc
Confidence 69999999997544322 2234568889999987776654 44567899999998876321 2233
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
...|+.+|.+.|.+++.++.+. .+++++++|||.++++..... . ........+....
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~-------~-~~~~~~~~~~~~~------------- 214 (254)
T 2wsb_A 156 ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM-------R-ERPELFETWLDMT------------- 214 (254)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH-------H-TCHHHHHHHHHTS-------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc-------c-cChHHHHHHHhcC-------------
Confidence 4789999999999999887764 379999999999998620000 0 0001122222211
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++++|+|+++.+++.... ....++++++.+|.
T Consensus 215 ----~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 215 ----PMGRCGEPSEIAAAALFLASPAA-SYVTGAILAVDGGY 251 (254)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred ----CCCCCCCHHHHHHHHHHHhCccc-ccccCCEEEECCCE
Confidence 11247899999999999986522 23567899997764
No 155
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.93 E-value=6.2e-25 Score=189.90 Aligned_cols=219 Identities=16% Similarity=0.104 Sum_probs=161.9
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC-------eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY-------KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV 73 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (347)
|+|+|+||||+|+||++++++|+++|+ +|++++|+....+...+.+.. .+.++.++.+|++|.+++.++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~ 76 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA----EGALTDTITADISDMADVRRL 76 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT----TTCEEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc----cCCeeeEEEecCCCHHHHHHH
Confidence 578999999999999999999999999 999999876554443333322 234688899999999999888
Q ss_pred HccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCC
Q 040584 74 FAGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVP 140 (347)
Q Consensus 74 ~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~ 140 (347)
++.. ++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+.
T Consensus 77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------ 150 (244)
T 2bd0_A 77 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK------ 150 (244)
T ss_dssp HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------
T ss_pred HHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC------
Confidence 7632 5999999999754322 2345567889999999999887643 4567999999998873
Q ss_pred CCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCce
Q 040584 141 CTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPAL 218 (347)
Q Consensus 141 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (347)
+..+...|+.+|.+++.+++.++.+. .+++++++|||.+++|..... . ..
T Consensus 151 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~-------------~~--- 202 (244)
T 2bd0_A 151 -----AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-------D-------------DE--- 202 (244)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-------C-------------ST---
T ss_pred -----CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-------c-------------cc---
Confidence 33456789999999999998876653 479999999999998731100 0 00
Q ss_pred EEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 219 TVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 219 ~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
. ...+++++|+|++++.++.... ....++++...+++.+
T Consensus 203 -----------~--~~~~~~~~dva~~~~~l~~~~~-~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 203 -----------M--QALMMMPEDIAAPVVQAYLQPS-RTVVEEIILRPTSGDI 241 (244)
T ss_dssp -----------T--GGGSBCHHHHHHHHHHHHTSCT-TEEEEEEEEEETTCCC
T ss_pred -----------c--cccCCCHHHHHHHHHHHHhCCc-cccchheEEecccccc
Confidence 0 1136789999999999997622 2234566666555544
No 156
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.93 E-value=6.3e-25 Score=191.75 Aligned_cols=237 Identities=13% Similarity=0.081 Sum_probs=163.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch-hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA-SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+... .+...+.+.... +.++.++.+|++|.+++.+++++.
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH---GVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH---TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc---CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999988765 444444443221 246788999999999998887632
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 149 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-----------AS 149 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc-----------CC
Confidence 6999999999754322 234456789999999999888764 34567999999988763 23
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEe-ccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVF-GTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 224 (347)
.+...|+.||.+.+.+++.++.++ .++++++++||.+.+|..... ..................+ .
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-- 217 (260)
T 1x1t_A 150 ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ----------ISALAEKNGVDQETAARELLS-- 217 (260)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------------CHH--
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh----------hhhhccccCCchHHHHHHHhh--
Confidence 455789999999999999888764 379999999999998631100 0000000000000000000 0
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.......+.+.+|+|+++.+++.... ....+++|++.+|.
T Consensus 218 ----~~~p~~~~~~p~dva~~~~~l~s~~~-~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 218 ----EKQPSLQFVTPEQLGGTAVFLASDAA-AQITGTTVSVDGGW 257 (260)
T ss_dssp ----HHCTTCCCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred ----ccCCCCCCcCHHHHHHHHHHHhChhh-cCCCCCEEEECCCc
Confidence 00011347899999999999987522 24578999998774
No 157
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.93 E-value=1.4e-24 Score=188.37 Aligned_cols=225 Identities=18% Similarity=0.159 Sum_probs=154.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+.... ..++..+.+|++|.+++.++++..
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE--------------QYPFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS--------------CCSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh--------------cCCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999876521 113778899999999999888632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+++...+++|+.++.++++++ ++.+.++||++||...+. +..
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~ 141 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-----------PRI 141 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCC
Confidence 6999999999754322 23455678999999999998877 445677999999998762 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHH-HHHcCCCCceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVT-QVAVGRRPALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~ 225 (347)
+...|+.+|.+.+.+++.++.+. .++++++++||.++++....... ... ... ...... ..+.
T Consensus 142 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~---~~~~~~~~~~-~~~~------ 206 (250)
T 2fwm_X 142 GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-----SDD---AEEQRIRGFG-EQFK------ 206 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-----Chh---HHHHHHhhhh-hccc------
Confidence 56789999999999999887764 38999999999999873110000 000 000 000000 0000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.......+.+.+|+|+++.+++.... ....++++++.+|..
T Consensus 207 ---~~~p~~~~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 207 ---LGIPLGKIARPQEIANTILFLASDLA-SHITLQDIVVDGGST 247 (250)
T ss_dssp ------------CHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTT
T ss_pred ---ccCCCCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEECCCcc
Confidence 00112247899999999999987622 245789999987754
No 158
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.93 E-value=5.5e-25 Score=194.06 Aligned_cols=226 Identities=15% Similarity=0.118 Sum_probs=154.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC-chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD-NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+. ...+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL----GARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT----TCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999998643 3333333444332 457899999999999988887643
Q ss_pred -CCcEEEEccccc--cCCc----cccCcchhhhhhhhHHHHHHHHHHHc----C---CCeEEEeccccccCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLK--AVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----G---CKNLVFSSSATAYGWPKVVPCTE 143 (347)
Q Consensus 78 -~~d~vih~a~~~--~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~iv~~SS~~~yg~~~~~~~~e 143 (347)
++|+||||||.. .... +.+.+...+++|+.++.++++++... + .++||++||...+.
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--------- 176 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM--------- 176 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc---------
Confidence 699999999973 2211 34456678999999999888876542 2 45899999987752
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHH-HHHHcCCCCceEE
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFV-TQVAVGRRPALTV 220 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 220 (347)
+......|+.||.+.+.+.+.++.+. .++++.+++||.+..+... .+.... .....+
T Consensus 177 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----------~~~~~~~~~~~~~------- 236 (280)
T 4da9_A 177 --TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTA-----------AVSGKYDGLIESG------- 236 (280)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------------
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchh-----------hcchhHHHHHhhc-------
Confidence 33455789999999999999988774 3799999999999876211 010000 000000
Q ss_pred ecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 221 FGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 221 ~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
......+..++|+|+++.+++... .....|+++++.+|..+
T Consensus 237 ---------~~p~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 237 ---------LVPMRRWGEPEDIGNIVAGLAGGQ-FGFATGSVIQADGGLSI 277 (280)
T ss_dssp --------------CCBCHHHHHHHHHHHHTST-TGGGTTCEEEESTTCC-
T ss_pred ---------CCCcCCcCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCccc
Confidence 112234678999999999998762 22357899999887543
No 159
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.93 E-value=3.8e-25 Score=194.84 Aligned_cols=231 Identities=16% Similarity=0.134 Sum_probs=164.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA----GVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 78999999999999999999999999999999866554444444332 346888999999999988887632
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc------CCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH------GCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+. +.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~ 167 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-----------GV 167 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS-----------CC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc-----------CC
Confidence 5999999999754332 22345678899999999999886543 557999999987652 23
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHc--CC--CCceEEe
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAV--GR--RPALTVF 221 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~ 221 (347)
.+...|+.+|.+.+.+++.++.+. .++++++++||.+.++. .......... +. ......+
T Consensus 168 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T 2rhc_B 168 VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM--------------AASVREHYSDIWEVSTEEAFDRI 233 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH--------------HHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch--------------hhhhhhhcccccccchHHHHHHH
Confidence 445789999999999999888764 37899999999998751 0011000000 00 0000000
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
. .......+++++|+|+++++++.... ....+++|++.+|.
T Consensus 234 ~------~~~p~~r~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 234 T------ARVPIGRYVQPSEVAEMVAYLIGPGA-AAVTAQALNVCGGL 274 (277)
T ss_dssp H------HHSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred H------hcCCCCCCcCHHHHHHHHHHHhCchh-cCCCCcEEEECCCc
Confidence 0 00112347899999999999987522 24578999998774
No 160
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.93 E-value=8.2e-25 Score=194.17 Aligned_cols=230 Identities=15% Similarity=0.080 Sum_probs=167.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 80 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+.+...+.+ ..++.++.+|++|.+++.++++.. ++|
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-------AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-------SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 478999999999999999999999999999999865544332221 357889999999999999999865 689
Q ss_pred EEEEccccccCC--ccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCC-CC-CCCCCCCCCCCCCchhhh
Q 040584 81 AVIHFAGLKAVG--ESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWP-KV-VPCTEEFPLQAMNPYGRS 156 (347)
Q Consensus 81 ~vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~-~~-~~~~e~~~~~~~~~Y~~s 156 (347)
+||||||..... .+.+.++..+++|+.++.++++++.....+|||++||...+... .. ....+..+..+...|+.|
T Consensus 89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 168 (291)
T 3rd5_A 89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQS 168 (291)
T ss_dssp EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHH
T ss_pred EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHH
Confidence 999999975432 24567788999999999999999988766799999998877432 11 122233445566789999
Q ss_pred HHHHHHHHHHHhhhc--CC--ceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCce
Q 040584 157 KLFIEEICRDVHRSD--SE--WKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTV 232 (347)
Q Consensus 157 K~~~e~~~~~~~~~~--~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 232 (347)
|.+.+.+++.++.++ .+ +++.+++||.+..+-... ........... . -.
T Consensus 169 K~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~-----------~~~~~~~~~~~----~------------~~ 221 (291)
T 3rd5_A 169 KLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA-----------SGRKLGDALMS----A------------AT 221 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc-----------cchHHHHHHHH----H------------HH
Confidence 999999999888775 24 899999999998752110 00000000000 0 01
Q ss_pred eeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 233 VRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 233 ~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
.+-..+.+|+|+++++++.. +...|+.|++.+|
T Consensus 222 ~~~~~~~~~~A~~~~~l~~~---~~~~G~~~~vdgG 254 (291)
T 3rd5_A 222 RVVATDADFGARQTLYAASQ---DLPGDSFVGPRFG 254 (291)
T ss_dssp ---CHHHHHHHHHHHHHHHS---CCCTTCEEEETTS
T ss_pred HHHhCCHHHHHHHHHHHHcC---CCCCCceeCCccc
Confidence 11234589999999999987 3567788888654
No 161
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.93 E-value=5.2e-25 Score=192.70 Aligned_cols=233 Identities=14% Similarity=0.086 Sum_probs=166.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+........+.+... .+.++.++.+|++|.+++.++++..
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE---FGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH---HTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh---cCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999999999766554434443322 1357889999999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----C-CCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----G-CKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+|||+||...... ..+.+...+++|+.++.++++++... + .++||++||...+..... ...+.
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~ 166 (265)
T 1h5q_A 91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGS 166 (265)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEE
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccc
Confidence 4999999999754332 23345567899999999998887543 3 369999999877532110 01223
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 224 (347)
.+...|+.+|.+.+.+++.++.+. .+++++++|||.++++... .+.+ .........
T Consensus 167 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~~~---------- 225 (265)
T 1h5q_A 167 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA-----------HMDKKIRDHQASNI---------- 225 (265)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-----------GSCHHHHHHHHHTC----------
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccc-----------ccchhHHHHHHhcC----------
Confidence 346789999999999999887764 3799999999999986310 1111 222222111
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+++++|+|+++.+++.... ....+++|++.+|..
T Consensus 226 -------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 226 -------PLNRFAQPEEMTGQAILLLSDHA-TYMTGGEYFIDGGQL 263 (265)
T ss_dssp -------TTSSCBCGGGGHHHHHHHHSGGG-TTCCSCEEEECTTGG
T ss_pred -------cccCCCCHHHHHHHHHhhccCch-hcCcCcEEEecCCEe
Confidence 11236799999999999987522 235789999988753
No 162
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.93 E-value=6.7e-25 Score=192.32 Aligned_cols=237 Identities=18% Similarity=0.138 Sum_probs=165.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+.... .+.++.++.+|++|.+++.++++..
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA--PDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC--TTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998665554444443321 1346888999999999999887642
Q ss_pred -CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHH----HHHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEV----MAAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||.... .. ..+.++..+++|+.++..++++ +++.+.++||++||...+. +.
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 159 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------GI 159 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------BC
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc-----------CC
Confidence 68999999997543 21 2344567889999998876554 4455677999999987752 23
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 224 (347)
.+...|+.+|.+.+.+.+.++.+. .++++++++||.++++....... .. ...... ........
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~-~~~~~~~~~~~~~~~----------- 225 (267)
T 1iy8_A 160 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK--QL-DPENPRKAAEEFIQV----------- 225 (267)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHH--HH-CTTCHHHHHHHHHTT-----------
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhcccc--cc-ChhhhhhHHHHHhcc-----------
Confidence 445789999999999999887764 37999999999998751000000 00 000000 00011110
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+.+.+|+|+++.+++.... ....++++++.+|...+
T Consensus 226 ------~p~~r~~~~~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 226 ------NPSKRYGEAPEIAAVVAFLLSDDA-SYVNATVVPIDGGQSAA 266 (267)
T ss_dssp ------CTTCSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTTTTB
T ss_pred ------CCCCCCcCHHHHHHHHHHHcCccc-cCCCCCEEEECCCcccC
Confidence 011236799999999999886522 24578999998886543
No 163
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.93 E-value=1.1e-25 Score=198.38 Aligned_cols=233 Identities=15% Similarity=0.089 Sum_probs=169.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+... .+.++.++.+|++|.+++.++++..
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA---TGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH---HSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999876655554444332 2457889999999999998887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 172 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR-----------GQA 172 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH-----------TCT
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------CCC
Confidence 6999999999654322 3345667899999999999988743 3456999999987752 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.||.+.+.+++.++.++ .++++.+++||.+.++... .. ...............
T Consensus 173 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~-~~~~~~~~~~~~~~~------------ 233 (277)
T 4fc7_A 173 LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL------RR-LGGPQASLSTKVTAS------------ 233 (277)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHH------HH-HSCCHHHHHHHHHTS------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhh------hh-ccCCHHHHHHHhccC------------
Confidence 45789999999999999888775 3799999999999875100 00 000011122222111
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
....+...+|+|+++.+++... .....|+++++.+|..+++
T Consensus 234 -----p~~r~~~p~dvA~~v~fL~s~~-~~~itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 234 -----PLQRLGNKTEIAHSVLYLASPL-ASYVTGAVLVADGGAWLTF 274 (277)
T ss_dssp -----TTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTHHHHC
T ss_pred -----CCCCCcCHHHHHHHHHHHcCCc-cCCcCCCEEEECCCcccCC
Confidence 1123678999999999999752 2346789999988865543
No 164
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.93 E-value=5.6e-25 Score=191.02 Aligned_cols=209 Identities=18% Similarity=0.187 Sum_probs=161.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+|+||||+|+||++++++|+++|++|++++|+..... -..+.+|++|.+++.++++..
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~d~~d~~~v~~~~~~~~~~ 84 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------------DHSFTIKDSGEEEIKSVIEKINSK 84 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999876432 245788999999998887643
Q ss_pred --CCcEEEEccccccCC-----ccccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVG-----ESVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||..... ...+.+...+++|+.++.++++++...- -++||++||...+. +..
T Consensus 85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 153 (251)
T 3orf_A 85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------RTS 153 (251)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCT
T ss_pred cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------CCC
Confidence 589999999965322 2234556788999999999999987642 24899999988762 445
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc----CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
+...|+.+|.+.+.+++.++.++ .++++.+++||.+..+ +......
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~------------------~~~~~~~------------ 203 (251)
T 3orf_A 154 GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP------------------TNRKYMS------------ 203 (251)
T ss_dssp TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH------------------HHHHHCT------------
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc------------------chhhhcc------------
Confidence 56789999999999999998883 4899999999988764 2222111
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
......+++++|+|+++++++..+......|+++++.+++..
T Consensus 204 -----~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 204 -----DANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp -----TSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred -----cccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence 112234788999999999999862233467899999776643
No 165
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.93 E-value=8e-25 Score=192.92 Aligned_cols=233 Identities=18% Similarity=0.121 Sum_probs=170.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG----GGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT----TTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999999887665554444432 2457888999999999999887642
Q ss_pred CCcEEEEccccccC-C----ccccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAV-G----ESVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||.... . .+.+.+...+++|+.++.++++++.. .+.++||++||...+. .+..
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~ 154 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT----------AGFA 154 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT----------BCCT
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc----------CCCC
Confidence 69999999996532 1 23345667899999999999887653 3456999999987752 1334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.||.+.+.+++.++.++ .++++.+++||.+.+|..... .............. ..
T Consensus 155 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~-~~----------- 216 (280)
T 3tox_A 155 GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFAN------LPGAAPETRGFVEG-LH----------- 216 (280)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGG------STTCCTHHHHHHHT-TS-----------
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhh------ccccCHHHHHHHhc-cC-----------
Confidence 56789999999999999988875 489999999999998731100 00001112222221 11
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
....+.+++|+|+++++++.... ....|+++++.+|..++.
T Consensus 217 -----p~~r~~~pedvA~~v~~L~s~~a-~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 217 -----ALKRIARPEEIAEAALYLASDGA-SFVTGAALLADGGASVTK 257 (280)
T ss_dssp -----TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGCC
T ss_pred -----ccCCCcCHHHHHHHHHHHhCccc-cCCcCcEEEECCCccccc
Confidence 11236789999999999997622 346789999998876654
No 166
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.93 E-value=3.5e-25 Score=196.16 Aligned_cols=248 Identities=17% Similarity=0.177 Sum_probs=169.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc------------hhHHHHHHHHHhhccCCCCeEEEecCCCCHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN------------ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAA 69 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (347)
+|+++||||+|+||++++++|+++|++|++++|+.. ..+.....+.. .+.++.++.+|++|.++
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK----TGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH----TTSCEEEEECCTTCHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh----cCCceEEEEccCCCHHH
Confidence 378999999999999999999999999999998732 12222222222 24678899999999999
Q ss_pred HHHHHccC-----CCcEEEEccccccCC--ccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCC
Q 040584 70 LEVVFAGT-----KFDAVIHFAGLKAVG--ESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVP 140 (347)
Q Consensus 70 ~~~~~~~~-----~~d~vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~ 140 (347)
+.+++++. ++|+||||||..... .+.+.+...+++|+.++.++++++... +.++||++||...+......+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 165 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP 165 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence 98887643 699999999976533 234456779999999999999998765 345999999988764322222
Q ss_pred CCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCC-CCc
Q 040584 141 CTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGR-RPA 217 (347)
Q Consensus 141 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 217 (347)
..+..+..+...|+.+|.+.+.+++.++.++ .++++.+++||.+..+... -.+......... .+.
T Consensus 166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~------------~~~~~~~~~~~~~~~~ 233 (287)
T 3pxx_A 166 GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN------------SAPMYRQFRPDLEAPS 233 (287)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS------------SHHHHHHHCTTSSSCC
T ss_pred cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc------------ccchhhhhccccccch
Confidence 3333333455789999999999999888775 3799999999999986311 001111110000 000
Q ss_pred e-----EEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 218 L-----TVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 218 ~-----~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
. .... .......+.+++|+|+++++++... .....|+++++.+|..++
T Consensus 234 ~~~~~~~~~~------~~~~~~~~~~p~dva~~v~fL~s~~-a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 234 RADALLAFPA------MQAMPTPYVEASDISNAVCFLASDE-SRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp HHHHHHHGGG------GCSSSCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGGG
T ss_pred hHHHHhhhhh------hcccCCCCCCHHHHHhhHheecchh-hcCCCCceEeECchhhhc
Confidence 0 0000 0111145789999999999998652 234678999998886543
No 167
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.93 E-value=1.2e-24 Score=190.09 Aligned_cols=171 Identities=16% Similarity=0.233 Sum_probs=137.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA----GGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999877666555555443 457788999999999998887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~~ 148 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS-----------VVP 148 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc-----------cCC
Confidence 6999999999765433 334556788999999998877654 34567999999988762 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGA 187 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~ 187 (347)
....|+.||.+.+.+.+.++.+.+++++.++.||.+..+
T Consensus 149 ~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~ 187 (264)
T 3tfo_A 149 TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESE 187 (264)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCc
Confidence 557899999999999999988877899999999988765
No 168
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.93 E-value=6.6e-25 Score=192.89 Aligned_cols=226 Identities=19% Similarity=0.162 Sum_probs=158.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+++|+||||+|+||++++++|+++|++|+++ .|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES----GGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999876 55544444444444332 457889999999999999888643
Q ss_pred --CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHHHHHc-------CCCeEEEeccccccCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEVMAAH-------GCKNLVFSSSATAYGWPKVVPCTE 143 (347)
Q Consensus 78 --~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~iv~~SS~~~yg~~~~~~~~e 143 (347)
++|+||||||.... .. +.+.+...+++|+.++.++++++... +.++||++||...+..
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 173 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG-------- 173 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC--------
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC--------
Confidence 68999999997543 21 33455678999999999998887653 2458999999877521
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEe
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVF 221 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
.......|+.||.+.+.+++.++.++ .++++++++||.+.++.... . ...........
T Consensus 174 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~----~~~~~~~~~~~--------- 233 (272)
T 4e3z_A 174 --SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS-----G----GLPDRAREMAP--------- 233 (272)
T ss_dssp --CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------------------------
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc-----c----CChHHHHHHhh---------
Confidence 11234579999999999998887764 37999999999999863110 0 00001111111
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
......+.+++|+|+++++++.... ....|++|++.+|
T Consensus 234 --------~~~~~~~~~~edvA~~i~~l~s~~~-~~~tG~~i~vdgG 271 (272)
T 4e3z_A 234 --------SVPMQRAGMPEEVADAILYLLSPSA-SYVTGSILNVSGG 271 (272)
T ss_dssp --------CCTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred --------cCCcCCCcCHHHHHHHHHHHhCCcc-ccccCCEEeecCC
Confidence 1112235689999999999987522 2457899999876
No 169
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.93 E-value=9.8e-25 Score=188.94 Aligned_cols=225 Identities=14% Similarity=0.108 Sum_probs=162.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC-CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN-LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|+++.| +....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL----GSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999988 444444333444332 346888999999999999888642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 148 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT-----------GN 148 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC-----------CC
Confidence 6999999999754322 233456789999999877766543 45667999999987652 22
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.....|+.+|.+.+.+.+.++.+. .++++++++||.+.++.... .... .........
T Consensus 149 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~---~~~~~~~~~----------- 207 (246)
T 2uvd_A 149 PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-------LDEN---IKAEMLKLI----------- 207 (246)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-------CCTT---HHHHHHHTC-----------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-------cCHH---HHHHHHhcC-----------
Confidence 345689999999999998887664 37999999999998763110 0111 111111111
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++.+|+|+++.+++... .....++++++.+|.
T Consensus 208 ------p~~~~~~~~dvA~~~~~l~s~~-~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 208 ------PAAQFGEAQDIANAVTFFASDQ-SKYITGQTLNVDGGM 244 (246)
T ss_dssp ------TTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTS
T ss_pred ------CCCCCcCHHHHHHHHHHHcCch-hcCCCCCEEEECcCc
Confidence 0113789999999999998652 123568899998774
No 170
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.93 E-value=5.6e-26 Score=191.46 Aligned_cols=191 Identities=14% Similarity=0.127 Sum_probs=149.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc-CCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG-TKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~ 81 (347)
|+++||||+|+||++++++|+++ +|++++|+....+...+.+ . . .++.+|++|.+++.++++. .++|+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-------~-~-~~~~~D~~~~~~~~~~~~~~~~id~ 69 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-------G-A-RALPADLADELEAKALLEEAGPLDL 69 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-------T-C-EECCCCTTSHHHHHHHHHHHCSEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-------c-C-cEEEeeCCCHHHHHHHHHhcCCCCE
Confidence 68999999999999999999999 9999998755443322221 1 1 7888999999999998872 14999
Q ss_pred EEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhH
Q 040584 82 VIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSK 157 (347)
Q Consensus 82 vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK 157 (347)
|||+||...... ..+.+...+++|+.++.++++++++.+.++||++||..+|. +..+...|+.+|
T Consensus 70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~sK 138 (207)
T 2yut_A 70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV-----------QVPGFAAYAAAK 138 (207)
T ss_dssp EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH-----------SSTTBHHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCcchHHHHH
Confidence 999999754322 33455678999999999999999766677999999998873 345567899999
Q ss_pred HHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeee
Q 040584 158 LFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRD 235 (347)
Q Consensus 158 ~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 235 (347)
.++|.+++.++.+. .+++++++|||.++++. ..+ .+...+.
T Consensus 139 ~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~----------------------~~~---------------~~~~~~~ 181 (207)
T 2yut_A 139 GALEAYLEAARKELLREGVHLVLVRLPAVATGL----------------------WAP---------------LGGPPKG 181 (207)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG----------------------GGG---------------GTSCCTT
T ss_pred HHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC----------------------ccc---------------cCCCCCC
Confidence 99999999887763 48999999999999861 000 1122356
Q ss_pred eeeHHHHHHHHHHHHHh
Q 040584 236 YIHVVDLADGHIAALRK 252 (347)
Q Consensus 236 ~i~v~D~a~a~~~~~~~ 252 (347)
+++++|+|++++.+++.
T Consensus 182 ~~~~~dva~~~~~~~~~ 198 (207)
T 2yut_A 182 ALSPEEAARKVLEGLFR 198 (207)
T ss_dssp CBCHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 89999999999999986
No 171
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.93 E-value=6.8e-26 Score=198.89 Aligned_cols=227 Identities=15% Similarity=0.130 Sum_probs=169.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+++... +.++.++.+|++|.+++.++++..
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV----GHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 378999999999999999999999999999998876666555555443 457889999999999999888642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+++...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~~ 170 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-----------ARA 170 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCT
T ss_pred CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------CCC
Confidence 6999999999764433 3345567899999999999776543 3567999999987652 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH---HHHHHHHcCCCCceEEecc
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM---PFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~ 223 (347)
+...|+.+|.+.+.+++.++.++ .++++.+++||.+..+.. ..+. .+........
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~~~~~~~~~~~~--------- 230 (271)
T 4ibo_A 171 TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN-----------QALIDNPEFDAWVKART--------- 230 (271)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG-----------HHHHHCHHHHHHHHHHS---------
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcch-----------hhcccCHHHHHHHHhcC---------
Confidence 56789999999999999888774 379999999999987620 0010 1111111111
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
....+..++|+|+++++++.... ....|+++++.+|...+
T Consensus 231 --------p~~r~~~pedva~~v~~L~s~~~-~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 231 --------PAKRWGKPQELVGTAVFLSASAS-DYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp --------TTCSCBCGGGGHHHHHHHHSGGG-TTCCSCEEEESTTGGGB
T ss_pred --------CCCCCcCHHHHHHHHHHHhCccc-cCCCCcEEEECCCeecc
Confidence 11236789999999999887522 34678999998886544
No 172
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.93 E-value=2.2e-24 Score=190.30 Aligned_cols=238 Identities=17% Similarity=0.165 Sum_probs=164.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc---------hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN---------ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV 72 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (347)
+|+++||||+|+||++++++|+++|++|++++|... ......+.+.......+.++.++.+|++|.+++.+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 94 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE 94 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 378999999999999999999999999999988421 01111222222222235678899999999999998
Q ss_pred HHccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcC-CCeEEEeccccccCCCCC
Q 040584 73 VFAGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHG-CKNLVFSSSATAYGWPKV 138 (347)
Q Consensus 73 ~~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~iv~~SS~~~yg~~~~ 138 (347)
++++. ++|+||||||...... ..+.++..+++|+.++.++++++. +.+ .++||++||...+.
T Consensus 95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---- 170 (280)
T 3pgx_A 95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK---- 170 (280)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc----
Confidence 87642 6999999999765433 334456688899999999988764 333 46899999988762
Q ss_pred CCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC
Q 040584 139 VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216 (347)
Q Consensus 139 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
+......|+.||.+.+.+++.++.+. .++++.+++||.+.+|... ...+...+..... ...
T Consensus 171 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---------~~~~~~~~~~~~~-~~~ 233 (280)
T 3pgx_A 171 -------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE---------PEAMMEIFARHPS-FVH 233 (280)
T ss_dssp -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC---------HHHHHHHHHHCGG-GGG
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc---------hhhhhhhhhcCch-hhh
Confidence 33456789999999999999888774 3799999999999987210 0001111111000 000
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.+... ..... .+++++|+|+++++++.... ....|+++++.+|.
T Consensus 234 ~~~~~-------~~~~~-r~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 234 SFPPM-------PVQPN-GFMTADEVADVVAWLAGDGS-GTLTGTQIPVDKGA 277 (280)
T ss_dssp GSCCB-------TTBCS-SCBCHHHHHHHHHHHHSGGG-TTCSSCEEEESTTG
T ss_pred hhhhc-------ccCCC-CCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCCc
Confidence 00000 11122 38899999999999987522 34678999997774
No 173
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.93 E-value=5.2e-25 Score=192.37 Aligned_cols=230 Identities=15% Similarity=0.166 Sum_probs=159.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+ ..++.++.+|++|.+++.++++..
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-------GDAALAVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999999999866554443332 357889999999999999888643
Q ss_pred -CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHHHHHc----C----CCeEEEeccccccCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEVMAAH----G----CKNLVFSSSATAYGWPKVVPCTE 143 (347)
Q Consensus 78 -~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~----~~~iv~~SS~~~yg~~~~~~~~e 143 (347)
++|+||||||.... .. ..+.+...+++|+.++.++++++... + ..+||++||...+.
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------- 152 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR--------- 152 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS---------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC---------
Confidence 68999999997542 11 23445668899999999888876432 1 34799999987752
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEe
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVF 221 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
+......|+.+|.+.+.+++.++.++ .++++.+++||.+.++..... ...... .....+
T Consensus 153 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------------~~~~~~---~~~~~~ 213 (261)
T 3n74_A 153 --PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF--------------MGEDSE---EIRKKF 213 (261)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh--------------cccCcH---HHHHHH
Confidence 34455679999999999999888774 379999999999887631100 000000 000000
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
. .......+++++|+|+++.+++... .....|+++++.+|..++-
T Consensus 214 ~------~~~~~~~~~~~~dva~~~~~l~s~~-~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 214 R------DSIPMGRLLKPDDLAEAAAFLCSPQ-ASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp ---------CTTSSCCCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTTTC--
T ss_pred h------hcCCcCCCcCHHHHHHHHHHHcCCc-ccCcCCcEEEecCCcccCC
Confidence 0 1122235789999999999988652 2346789999998876654
No 174
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.93 E-value=5.9e-25 Score=194.94 Aligned_cols=227 Identities=14% Similarity=0.120 Sum_probs=166.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+.......... .....+.++.++.+|++|.+++.+++++.
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQ---YVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH---HHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH---HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999876543222221 11123457889999999999998887643
Q ss_pred -CCcEEEEccccccCCc-----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE-----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... +.+++...+++|+.++.++++++... +.++||++||...+. +...
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 192 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE-----------GNET 192 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH-----------CCTT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC-----------CCCC
Confidence 6999999999753221 34456778999999999999998865 245999999988773 3344
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.||.+.+.+++.++.++ .++++.+++||.+++|.. ...+.. ..... .
T Consensus 193 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~----------~~~~~~~~~~~~--~------------- 247 (291)
T 3ijr_A 193 LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI----------PSSFDEKKVSQF--G------------- 247 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHH----------HHHSCHHHHHHT--T-------------
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcc----------cccCCHHHHHHH--H-------------
Confidence 5789999999999999888774 379999999999998610 000000 11111 1
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.......+.+++|+|+++++++.... ....|+++++.+|..
T Consensus 248 --~~~p~~r~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 248 --SNVPMQRPGQPYELAPAYVYLASSDS-SYVTGQMIHVNGGVI 288 (291)
T ss_dssp --TTSTTSSCBCGGGTHHHHHHHHSGGG-TTCCSCEEEESSSCC
T ss_pred --ccCCCCCCcCHHHHHHHHHHHhCCcc-CCCcCCEEEECCCcc
Confidence 11222347789999999999987622 346789999987754
No 175
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.93 E-value=5.1e-25 Score=192.78 Aligned_cols=221 Identities=13% Similarity=0.073 Sum_probs=158.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|+.|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-------GKDVFVFSANLSDRKSIKQLAEVAEREM 99 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999998765544333222 457889999999999999887632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+++...+++|+.++.++++++ ++.+.++||++||...+. +..
T Consensus 100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~ 168 (266)
T 3grp_A 100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV-----------GNP 168 (266)
T ss_dssp TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC-----------CCC
Confidence 6999999999764322 33456678999999977776654 445667999999987652 333
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 225 (347)
+...|+.||.+.+.+++.++.++ .++++.+++||.+.++.. ..+.+ ....+...
T Consensus 169 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~-----------~~~~~~~~~~~~~~------------ 225 (266)
T 3grp_A 169 GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMT-----------DKLNEKQKEAIMAM------------ 225 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHH-----------HTCCHHHHHHHHTT------------
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchh-----------hccCHHHHHHHHhc------------
Confidence 45789999999999999888774 379999999999987521 00111 22222221
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.....+.+.+|+|+++.+++.... ....|+++++.+|.
T Consensus 226 -----~p~~r~~~~edvA~~v~~L~s~~~-~~itG~~i~vdGG~ 263 (266)
T 3grp_A 226 -----IPMKRMGIGEEIAFATVYLASDEA-AYLTGQTLHINGGM 263 (266)
T ss_dssp -----CTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred -----CCCCCCcCHHHHHHHHHHHhCccc-cCccCCEEEECCCe
Confidence 112236789999999999987522 34678999998775
No 176
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.93 E-value=6.2e-25 Score=191.88 Aligned_cols=232 Identities=15% Similarity=0.123 Sum_probs=165.8
Q ss_pred CceEEEEcCC--CcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGV--GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+++||||+ |+||++++++|+++|++|++++|+.. .....+.+.... ..+.++.+|++|.+++.++++..
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL----GGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc----CCcEEEECCCCCHHHHHHHHHHHHH
Confidence 3789999999 99999999999999999999998764 222333333221 24788999999999998887642
Q ss_pred ---CCcEEEEccccccC--------CccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAV--------GESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 ---~~d~vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||.... ....+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~---------- 152 (261)
T 2wyu_A 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK---------- 152 (261)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS----------
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC----------
Confidence 68999999997532 1233455678999999999999998764 125999999987652
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+..+...|+.||.+.+.+++.++.++ .++++++++||.+++|.... . .........+.... +
T Consensus 153 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~-~~~~~~~~~~~~~~--p----- 216 (261)
T 2wyu_A 153 -VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS-------I-PGFTKMYDRVAQTA--P----- 216 (261)
T ss_dssp -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG-------C-TTHHHHHHHHHHHS--T-----
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh-------c-cccHHHHHHHHhcC--C-----
Confidence 23345689999999999999887764 37999999999999863110 0 01112222222211 0
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
...+.+++|+|+++.+++.... ....+++|++.+|..++..|
T Consensus 217 ----------~~~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 217 ----------LRRNITQEEVGNLGLFLLSPLA-SGITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp ----------TSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGBC--
T ss_pred ----------CCCCCCHHHHHHHHHHHcChhh-cCCCCCEEEECCCccccCCC
Confidence 1125689999999999986522 23568999998887665444
No 177
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.93 E-value=1.5e-24 Score=191.41 Aligned_cols=227 Identities=15% Similarity=0.053 Sum_probs=163.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY----GVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH----CSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 378999999999999999999999999999999877655444444332 347889999999999998887642
Q ss_pred -CCcEEEEccccccC-C-----ccccCcchhhhhhhhHH----HHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV-G-----ESVQKPLPYFDNNLTGT----ITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 -~~d~vih~a~~~~~-~-----~~~~~~~~~~~~nv~~~----~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+|||+||.... . ...+.+...+++|+.++ +.+++.+++.+.++||++||...+.. .+
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~ 180 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NI 180 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CC
Confidence 49999999997543 1 12234456889999995 56666777777789999999876521 01
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
..+...|+.+|.+.|.+++.++.++ .+ ++++++||.+.++... . .............
T Consensus 181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~-------~---~~~~~~~~~~~~~---------- 239 (279)
T 3ctm_A 181 PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD-------F---ASKDMKAKWWQLT---------- 239 (279)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS-------S---CCHHHHHHHHHHS----------
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc-------c---cChHHHHHHHHhC----------
Confidence 3455789999999999999998875 35 9999999999876210 0 0011222221110
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+++++|+|+++.+++.... ....++++++.+|..
T Consensus 240 -------p~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 240 -------PLGREGLTQELVGGYLYLASNAS-TFTTGSDVVIDGGYT 277 (279)
T ss_dssp -------TTCSCBCGGGTHHHHHHHHSGGG-TTCCSCEEEESTTCC
T ss_pred -------CccCCcCHHHHHHHHHHHhCccc-cCccCCEEEECCCee
Confidence 01137899999999999987522 235779999987754
No 178
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.93 E-value=2e-24 Score=190.29 Aligned_cols=225 Identities=16% Similarity=0.133 Sum_probs=164.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC-CCchhHHHHHHHHHhhccCCCCeEEEecCCCCH----HHHHHHHccC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN-LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK----AALEVVFAGT 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~~~ 77 (347)
|+++||||+|+||++++++|+++|++|++++| +....+...+.+... .+.++.++.+|++|. +++.++++..
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA---RAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---STTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh---cCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 68999999999999999999999999999998 655444444444332 134688899999999 8888877632
Q ss_pred -----CCcEEEEccccccCCcc----c-----------cCcchhhhhhhhHHHHHHHHHHHc---CC------CeEEEec
Q 040584 78 -----KFDAVIHFAGLKAVGES----V-----------QKPLPYFDNNLTGTITLLEVMAAH---GC------KNLVFSS 128 (347)
Q Consensus 78 -----~~d~vih~a~~~~~~~~----~-----------~~~~~~~~~nv~~~~~l~~~~~~~---~~------~~iv~~S 128 (347)
++|+||||||....... . +.+...+++|+.++.++++++... +. ++||++|
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is 168 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 168 (276)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence 69999999997543221 1 344568999999999999988763 33 6999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHH
Q 040584 129 SATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPF 206 (347)
Q Consensus 129 S~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~ 206 (347)
|...+. +..+...|+.||.+.+.+++.++.+. .++++++++||.+++| . .. ....
T Consensus 169 S~~~~~-----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--------~~---~~~~ 225 (276)
T 1mxh_A 169 DAMTDL-----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--------AM---PQET 225 (276)
T ss_dssp CGGGGS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--------SS---CHHH
T ss_pred chhhcC-----------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--------cC---CHHH
Confidence 988763 33456789999999999999887764 3799999999999986 1 00 0112
Q ss_pred HHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 207 VTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
........ + -+ +++.+++|+|+++++++.... ....+++|++.+|..
T Consensus 226 ~~~~~~~~--p-----------~~---r~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 226 QEEYRRKV--P-----------LG---QSEASAAQIADAIAFLVSKDA-GYITGTTLKVDGGLI 272 (276)
T ss_dssp HHHHHTTC--T-----------TT---SCCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred HHHHHhcC--C-----------CC---CCCCCHHHHHHHHHHHhCccc-cCccCcEEEECCchh
Confidence 22222211 0 11 126789999999999987522 235678999987753
No 179
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.93 E-value=3.5e-25 Score=194.55 Aligned_cols=228 Identities=15% Similarity=0.111 Sum_probs=165.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc----C
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----T 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 77 (347)
+|+++||||+|+||++++++|+++|++|++++|.. ......+.+.. .+.++.++.+|++|.+++.++.+. .
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIAD----GGGSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHT----TTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999998653 33333333332 245788999999999988877542 1
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... +.+++...+++|+.++.++++++ ++.+.++||++||...+. +..+
T Consensus 106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~~~ 174 (273)
T 3uf0_A 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ-----------GGRN 174 (273)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCSS
T ss_pred CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC-----------CCCC
Confidence 6999999999765433 33445678999999999998876 344667999999988762 3445
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
...|+.||.+.+.+++.++.+. .++++.+++||.+.+|..... ..............
T Consensus 175 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~------------- 233 (273)
T 3uf0_A 175 VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL--------RADDERAAEITARI------------- 233 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--------HTSHHHHHHHHHHS-------------
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc--------ccCHHHHHHHHhcC-------------
Confidence 6789999999999999988774 379999999999988621000 00001111211111
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+..++|+|+++.+++.... ....|+++++.+|...
T Consensus 234 ----p~~r~~~pedva~~v~~L~s~~a-~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 234 ----PAGRWATPEDMVGPAVFLASDAA-SYVHGQVLAVDGGWLA 272 (273)
T ss_dssp ----TTSSCBCGGGGHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred ----CCCCCCCHHHHHHHHHHHhCchh-cCCcCCEEEECcCccC
Confidence 11236789999999999987522 3467899999888654
No 180
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.92 E-value=8e-25 Score=191.08 Aligned_cols=237 Identities=14% Similarity=0.099 Sum_probs=162.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc----CC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----TK 78 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~ 78 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+.... ...++.++.+|++|.+++.++++. ++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV--SGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--TTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 689999999999999999999999999999997665554444443210 022688899999999999888762 24
Q ss_pred CcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCCCC
Q 040584 79 FDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM 150 (347)
Q Consensus 79 ~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~ 150 (347)
+|+||||||...... ..+.+...+++|+.++.++++++ ++.+.++||++||...+. +..+.
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~ 154 (260)
T 2z1n_A 86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR-----------PWQDL 154 (260)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC-----------CCCCC
Confidence 999999999654322 23345678999999997776654 345677999999998863 33445
Q ss_pred CchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCC
Q 040584 151 NPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 151 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
..|+.+|.+.+.+.+.++.++ .++++++++||.+++|........... ...+.... . ...+.
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~---~---~~~~~--------- 218 (260)
T 2z1n_A 155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR-RSGITVEE---A---LKSMA--------- 218 (260)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------------------
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhc-ccCCcHHH---H---HHHHH---------
Confidence 789999999999999887764 379999999999998732100000000 00000000 0 00000
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.......+.+.+|+|+++.+++.... ....++++++.+|.
T Consensus 219 ~~~p~~r~~~~~dva~~v~~l~s~~~-~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 219 SRIPMGRVGKPEELASVVAFLASEKA-SFITGAVIPVDGGA 258 (260)
T ss_dssp -CCTTSSCCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTT
T ss_pred hcCCCCCccCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCc
Confidence 00111236799999999999887522 24578999998774
No 181
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.92 E-value=1.5e-24 Score=190.01 Aligned_cols=224 Identities=13% Similarity=0.069 Sum_probs=165.2
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEe-CCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVD-NLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
|+|+|+||||+|+||++++++|+++|++|+++. |+........+.+... ..++.++.+|++|.+++.++++..
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN----GGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999997755 4433444334444332 457899999999999998887642
Q ss_pred ---CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH-----HcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA-----AHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 ---~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||...... +.+.+...+++|+.++.++++++. +.+.++||++||...+.
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 169 (267)
T 4iiu_A 101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM----------- 169 (267)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH-----------
T ss_pred HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc-----------
Confidence 6999999999765432 334556789999999999988763 44567999999987652
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+..+...|+.+|.+.+.+.+.++.++ .++++.+++||.+..+.. ..............
T Consensus 170 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~~~~~~~~--------- 229 (267)
T 4iiu_A 170 GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMI-----------EMEESALKEAMSMI--------- 229 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC-----------CCCHHHHHHHHHTC---------
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcc-----------cccHHHHHHHHhcC---------
Confidence 33456789999999999998887764 379999999999988621 11222333333221
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
....+..++|+|+++.+++.... ....|+++++.+|
T Consensus 230 --------p~~~~~~~edva~~~~~L~s~~~-~~itG~~i~vdGG 265 (267)
T 4iiu_A 230 --------PMKRMGQAEEVAGLASYLMSDIA-GYVTRQVISINGG 265 (267)
T ss_dssp --------TTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred --------CCCCCcCHHHHHHHHHHHhCCcc-cCccCCEEEeCCC
Confidence 11236789999999999987522 3467899999776
No 182
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.92 E-value=1.4e-24 Score=191.78 Aligned_cols=233 Identities=15% Similarity=0.064 Sum_probs=167.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
++++||||+|+||++++++|+++|++|++++|+....+...+.+.. .+.++.++.+|++|.+++.+++++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG----AGGQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT----TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999987665554444433 2457889999999999998888643
Q ss_pred CCcEEEEccccccC-C----ccccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAV-G----ESVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||.... . ...+.+...+++|+.++.++++++ ++.+.++||++||...+.. .+..
T Consensus 105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~~ 175 (283)
T 3v8b_A 105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTTP 175 (283)
T ss_dssp CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCST
T ss_pred CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCCC
Confidence 69999999997532 1 123445678999999999998887 4556679999999876421 1334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.||.+.+.+++.++.+. .++++.+++||.+..+...... . .... . .. .. .....
T Consensus 176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~-~~~~--~-~~-~~--~~~~~---- 237 (283)
T 3v8b_A 176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTK-------L-RHEE--E-TA-IP--VEWPK---- 237 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTT-------B-CCHH--H-HS-CC--CBCTT----
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccc-------c-ccch--h-hh-hh--hhhhh----
Confidence 56789999999999999998875 3799999999999876321100 0 0000 0 00 00 00000
Q ss_pred CCCCcee--eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 227 TKDGTVV--RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 227 ~~~~~~~--~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
..... ..+...+|+|+++.+++.... ....|+++++.+|.
T Consensus 238 --~~~p~~~~r~~~pedvA~~v~fL~s~~a-~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 238 --GQVPITDGQPGRSEDVAELIRFLVSERA-RHVTGSPVWIDGGQ 279 (283)
T ss_dssp --CSCGGGTTCCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTH
T ss_pred --hcCccccCCCCCHHHHHHHHHHHcCccc-cCCcCCEEEECcCc
Confidence 00111 236789999999999887522 34678999998774
No 183
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.92 E-value=2.2e-24 Score=187.10 Aligned_cols=224 Identities=14% Similarity=0.145 Sum_probs=158.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC-chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD-NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+. ...+. .+... +.++.++.+|++|.+++.++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL----GRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc----CCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999986 43322 22222 347888999999999998886531
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHH----HHHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEV----MAAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.+++++ +++.+.++||++||...+. +.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 148 (249)
T 2ew8_A 80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL-----------KI 148 (249)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------CC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------CC
Confidence 6999999999754332 2334566889999998888777 5555677999999998763 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+.+.++.+. .++++++++||.+.++... . .+......... . +.
T Consensus 149 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~-----~~~~~~~~~~~-~---~~------ 208 (249)
T 2ew8_A 149 EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE-----A-----SALSAMFDVLP-N---ML------ 208 (249)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------------C---TT------
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch-----h-----ccccchhhHHH-H---hh------
Confidence 456789999999999999888764 3799999999999886210 0 00000000000 0 00
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.....+.+.+|+|+++.+++... .....++++++.+|.
T Consensus 209 -----~~~~~~~~p~dva~~~~~l~s~~-~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 209 -----QAIPRLQVPLDLTGAAAFLASDD-ASFITGQTLAVDGGM 246 (249)
T ss_dssp -----SSSCSCCCTHHHHHHHHHHTSGG-GTTCCSCEEEESSSC
T ss_pred -----CccCCCCCHHHHHHHHHHHcCcc-cCCCCCcEEEECCCc
Confidence 01123689999999999988652 224578999998774
No 184
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.92 E-value=3.9e-25 Score=193.51 Aligned_cols=224 Identities=17% Similarity=0.117 Sum_probs=161.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+..... ....+.+|++|.+++.++++..
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~---------------~~~~~~~Dv~~~~~~~~~~~~~~~~~ 92 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA---------------ADLHLPGDLREAAYADGLPGAVAAGL 92 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC---------------CSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------hhhccCcCCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999998765432 2244578999999888777532
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++ ++.+.++||++||...+. +..
T Consensus 93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~ 161 (266)
T 3uxy_A 93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-----------PGP 161 (266)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------CCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCC
Confidence 6999999999765433 33445668889999999999887 455667999999987762 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.||.+.+.+++.++.++ .++++.+++||.+.++........ .. ............
T Consensus 162 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~--~~~~~~~~~~~~-------------- 224 (266)
T 3uxy_A 162 GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAK-RG--FDPDRAVAELGR-------------- 224 (266)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHH-TT--CCHHHHHHHHHT--------------
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhc-cc--ccchHHHHHHHh--------------
Confidence 56789999999999999888775 379999999999987510000000 00 000001111111
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
......+.+++|+|+++++++.... ....|+++++.+|..++
T Consensus 225 ---~~p~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 225 ---TVPLGRIAEPEDIADVVLFLASDAA-RYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp ---TSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTCCCC
T ss_pred ---cCCCCCCcCHHHHHHHHHHHhCchh-cCCcCCEEEECcCEeCC
Confidence 1122347899999999999997622 24578999998887553
No 185
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.92 E-value=1.3e-24 Score=193.20 Aligned_cols=250 Identities=12% Similarity=0.074 Sum_probs=170.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+..... ...++.++.+|++|.+++.++++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 105 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIINTTLAKFG 105 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 7899999999999999999999999999999986655544444433210 0116788999999999998887632
Q ss_pred CCcEEEEccccccCCc------cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE------SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+ ++||++||...+. +.
T Consensus 106 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~-----------~~ 173 (297)
T 1xhl_A 106 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP-----------QA 173 (297)
T ss_dssp CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS-----------SC
T ss_pred CCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc-----------CC
Confidence 6999999999654322 2334567899999999999887654 34 7999999988763 22
Q ss_pred -CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 148 -QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 -~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
.....|+.+|.+.+.+.+.++.+. .++++++++||.+.++..... ....................
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~~~~~------- 241 (297)
T 1xhl_A 174 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM-----GLPETASDKLYSFIGSRKEC------- 241 (297)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT-----TCCHHHHHHHHHHHHHCTTT-------
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc-----ccccccccchHHHHHHHHhc-------
Confidence 345689999999999999887653 389999999999988620000 00000000000010000000
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHH
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKA 283 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~ 283 (347)
.....+...+|+|+++++++.........++++++.+|..+...+.+..+.++
T Consensus 242 ------~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 242 ------IPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV 294 (297)
T ss_dssp ------CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred ------CCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence 01123789999999999998652012467899999888766655544444433
No 186
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.92 E-value=2.9e-24 Score=186.62 Aligned_cols=223 Identities=15% Similarity=0.151 Sum_probs=163.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCC--CCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL--RDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~~~-- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+.... ..++.++.+|+ +|.+++.++++..
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET---GRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc---CCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998776665555554432 24678899999 9999888877642
Q ss_pred ---CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 ---~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||.... .. ..+.+...+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------- 157 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ----------- 157 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS-----------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc-----------
Confidence 69999999997422 11 23345678999999999999887 444567999999987752
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhcC-CceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSDS-EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
+......|+.||.+.+.+.+.++.++. .+++.++.||.+..+ +...... .
T Consensus 158 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~------------------~~~~~~~-~---------- 208 (252)
T 3f1l_A 158 GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA------------------MRASAFP-T---------- 208 (252)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH------------------HHHHHCT-T----------
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc------------------hhhhhCC-c----------
Confidence 334557899999999999999998862 388899998877653 2222111 1
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHH
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVL 274 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~ 274 (347)
.....+...+|+++++++++.... ....|+++++.+|...++.
T Consensus 209 ------~~~~~~~~p~dva~~~~~L~s~~~-~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 209 ------EDPQKLKTPADIMPLYLWLMGDDS-RRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp ------CCGGGSBCTGGGHHHHHHHHSGGG-TTCCSCEEESSCC------
T ss_pred ------cchhccCCHHHHHHHHHHHcCccc-cCCCCCEEEeCCCcCCCCC
Confidence 111235688999999999987622 3467899999988876654
No 187
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.92 E-value=6.7e-25 Score=192.16 Aligned_cols=230 Identities=14% Similarity=0.071 Sum_probs=168.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+.... +.++.++.+|++|.+++.++++..
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF---GTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999999998766665555554321 457899999999999988887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+ .++||++||...+. +.
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 165 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA-----------PL 165 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CC
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc-----------CC
Confidence 6999999999765433 2334566889999999999887653 23 45999999988762 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.....|+.+|.+.+.+.+.++.++ .++++.+++||.+..+..... . ............
T Consensus 166 ~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~-~~~~~~~~~~~~------------ 225 (266)
T 4egf_A 166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV-------W-GDEAKSAPMIAR------------ 225 (266)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH-------T-CSHHHHHHHHTT------------
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh-------c-cChHHHHHHHhc------------
Confidence 456789999999999999888774 379999999999887510000 0 000111111111
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
.....+...+|+|+++++++.... ....|+++++.+|..+
T Consensus 226 -----~p~~r~~~p~dva~~v~~L~s~~~-~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 226 -----IPLGRFAVPHEVSDAVVWLASDAA-SMINGVDIPVDGGYTM 265 (266)
T ss_dssp -----CTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred -----CCCCCCcCHHHHHHHHHHHhCchh-cCccCcEEEECCCccC
Confidence 111236789999999999987522 3467899999887643
No 188
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.92 E-value=1.7e-24 Score=187.86 Aligned_cols=226 Identities=14% Similarity=0.116 Sum_probs=161.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+.. ..++.++.+|++|.+++.++++..
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-----PDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-----cCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 47899999999999999999999999999999876544333322211 147889999999999999887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCC-CeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGC-KNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++.+++. +.+. ++||++||...+. +.
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 149 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-----------GD 149 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------CC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc-----------CC
Confidence 5899999999754322 223446689999998887766543 4455 6999999998763 23
Q ss_pred CCCCchhhhHHHHHHHHHHHhhh----cCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRS----DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
.+...|+.+|.+++.+++.++.+ ..+++++++|||.+++|... ... ...... ....
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~-------~~~---~~~~~~-~~~~--------- 209 (251)
T 1zk4_A 150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD-------DLP---GAEEAM-SQRT--------- 209 (251)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHH-------TST---THHHHH-TSTT---------
T ss_pred CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhh-------hcC---chhhhH-HHhh---------
Confidence 45678999999999999887764 24899999999999986210 000 001111 0000
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
......+++++|+|+++.+++.... ....++.|++.+|..
T Consensus 210 ------~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 210 ------KTPMGHIGEPNDIAYICVYLASNES-KFATGSEFVVDGGYT 249 (251)
T ss_dssp ------TCTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred ------cCCCCCCcCHHHHHHHHHHHcCccc-ccccCcEEEECCCcc
Confidence 1112247899999999999987522 235678999988754
No 189
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.92 E-value=3.6e-24 Score=189.76 Aligned_cols=230 Identities=13% Similarity=0.062 Sum_probs=163.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.+++++.
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA----GINAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999999765554444444332 346888999999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..
T Consensus 110 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~-----------~~~ 178 (291)
T 3cxt_A 110 GIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL-----------GRE 178 (291)
T ss_dssp CCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCT
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECcccccc-----------CCC
Confidence 5999999999754332 234456789999999998877764 34667999999987642 234
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH---HHHHHHcCCCCceEEecc
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP---FVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~ 223 (347)
+...|+.||.+.+.+++.++.++ .++++++++||.+.++......... .... +........
T Consensus 179 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~~~--------- 244 (291)
T 3cxt_A 179 TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQ-----KDGSRHPFDQFIIAKT--------- 244 (291)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----------------CHHHHHHHHHC---------
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCcCcchhhhccch-----hhhhhhhHHhhhhccC---------
Confidence 56789999999999998887764 3799999999999886321100000 0000 110000000
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+.+++|+|+++++++.... ....++++++.+|.
T Consensus 245 --------p~~r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG~ 281 (291)
T 3cxt_A 245 --------PAARWGEAEDLMGPAVFLASDAS-NFVNGHILYVDGGI 281 (291)
T ss_dssp --------TTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred --------CCCCCCCHHHHHHHHHHHhCccc-cCCcCCeEEECCCc
Confidence 01136789999999999987522 23568999998774
No 190
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.92 E-value=7.3e-25 Score=194.64 Aligned_cols=229 Identities=17% Similarity=0.148 Sum_probs=165.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch--hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+... .+...+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE----CGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----TTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH----cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998876332 2222222222 2457889999999999988887632
Q ss_pred ---CCcEEEEccccccC-C----ccccCcchhhhhhhhHHHHHHHHHHHcCC--CeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAV-G----ESVQKPLPYFDNNLTGTITLLEVMAAHGC--KNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 ---~~d~vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||.... . .+.+.+...+++|+.++.++++++...-. ++||++||...+. +.
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~-----------~~ 193 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ-----------PS 193 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS-----------CC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc-----------CC
Confidence 69999999997432 1 13345577899999999999999876532 4999999998874 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.....|+.||.+.+.+++.++.++ .++++.+++||.|.++.....+. .. ..... +.
T Consensus 194 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----~~---~~~~~-----------~~--- 251 (294)
T 3r3s_A 194 PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-----TQ---DKIPQ-----------FG--- 251 (294)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS-----CG---GGSTT-----------TT---
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC-----CH---HHHHH-----------HH---
Confidence 456789999999999999888774 37999999999998752000000 00 00000 00
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
.......+...+|+|+++++++... .....|+++++.+|..+
T Consensus 252 ---~~~p~~r~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 252 ---QQTPMKRAGQPAELAPVYVYLASQE-SSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp ---TTSTTSSCBCGGGGHHHHHHHHSGG-GTTCCSCEEEESTTCCC
T ss_pred ---hcCCCCCCcCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCccC
Confidence 1112234678999999999998752 23467899999888654
No 191
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.92 E-value=1.6e-25 Score=201.58 Aligned_cols=240 Identities=15% Similarity=0.095 Sum_probs=175.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCC----------CchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNL----------DNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV 72 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (347)
|+++||||+|+||++++++|+++|++|++++|+ ........+.+... +.++.++.+|++|.+++.+
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA----GGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT----TCEEEEECCCTTSHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHH
Confidence 689999999999999999999999999999887 34444444444432 4578889999999999988
Q ss_pred HHccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcC----------CCeEEEecccccc
Q 040584 73 VFAGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHG----------CKNLVFSSSATAY 133 (347)
Q Consensus 73 ~~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~----------~~~iv~~SS~~~y 133 (347)
+++.. ++|+||||||...... +.+.+...+++|+.++.++++++...- -++||++||...+
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 183 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence 87643 6999999999765432 334556789999999999988765321 1499999998775
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHH
Q 040584 134 GWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA 211 (347)
Q Consensus 134 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (347)
. +......|+.||.+.+.+++.++.++ .++++.+++|| +..+-.. .. +.....
T Consensus 184 ~-----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~-------~~---~~~~~~--- 238 (322)
T 3qlj_A 184 Q-----------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTE-------TV---FAEMMA--- 238 (322)
T ss_dssp H-----------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSC-------CS---CCC------
T ss_pred c-----------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccch-------hh---hhhhhh---
Confidence 2 33455789999999999999988874 37999999998 6544210 00 000000
Q ss_pred cCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc-----------------cHH
Q 040584 212 VGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT-----------------SVL 274 (347)
Q Consensus 212 ~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~-----------------s~~ 274 (347)
.....+.++.++|+|+++++++.... ....|++|++.+|... ++.
T Consensus 239 -----------------~~~~~~~~~~pedva~~v~~L~s~~~-~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~ 300 (322)
T 3qlj_A 239 -----------------TQDQDFDAMAPENVSPLVVWLGSAEA-RDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPA 300 (322)
T ss_dssp ----------------------CCTTCGGGTHHHHHHHTSGGG-GGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGG
T ss_pred -----------------ccccccCCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCCccccCCCcccccccCccCCCCHH
Confidence 01112235689999999999886522 2357899999887644 779
Q ss_pred HHHHHHHHHhCCCCC
Q 040584 275 EMVAAFEKASGKKIP 289 (347)
Q Consensus 275 e~~~~i~~~~g~~~~ 289 (347)
|+++.+.+.+|.+.+
T Consensus 301 el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 301 ELGPVVADLLGKARP 315 (322)
T ss_dssp GHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhhccCC
Confidence 999999999985543
No 192
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.92 E-value=2.9e-24 Score=188.26 Aligned_cols=243 Identities=14% Similarity=0.118 Sum_probs=170.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~ 81 (347)
|+++||||+|+||++++++|+++|++|++++|+........+++..... ...+..+.+|++|.+++.++++++ ++|+
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP--DAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT--TCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC--CceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 6899999999999999999999999999999987766655555544321 345778899999999999988765 6999
Q ss_pred EEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCch
Q 040584 82 VIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPY 153 (347)
Q Consensus 82 vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y 153 (347)
||||||....... .+.+...+++|+.++.++++++. +.+.++||++||...+. +..+...|
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y 157 (267)
T 3t4x_A 89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM-----------PSQEMAHY 157 (267)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS-----------CCTTCHHH
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc-----------CCCcchHH
Confidence 9999997654332 23445578999999888766544 44567999999988762 44556789
Q ss_pred hhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCC-CCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCC
Q 040584 154 GRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGK-GEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230 (347)
Q Consensus 154 ~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 230 (347)
+.||.+.+.+.+.++.+. .++++.++.||.+..+..... ................+...... ..
T Consensus 158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 224 (267)
T 3t4x_A 158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR-------------PT 224 (267)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC-------------TT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC-------------Cc
Confidence 999999999999998876 368999999998876410000 00000000000001111111000 01
Q ss_pred ceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 231 TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 231 ~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+.+++|+|+++.+++... .....|+++++.+|...+
T Consensus 225 ~~~~r~~~pedvA~~v~fL~s~~-~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 225 SIIQRLIRPEEIAHLVTFLSSPL-SSAINGSALRIDGGLVRS 265 (267)
T ss_dssp CSSCSCBCTHHHHHHHHHHHSGG-GTTCCSCEEEESTTCSCS
T ss_pred ccccCccCHHHHHHHHHHHcCcc-ccCccCCeEEECCCcccc
Confidence 11235789999999999988752 234678999998887654
No 193
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.92 E-value=4.5e-24 Score=187.79 Aligned_cols=227 Identities=13% Similarity=0.088 Sum_probs=168.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+++... +.++.++.+|++|.+++.+++++.
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV----GGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 379999999999999999999999999999999887777666666543 457889999999999999888743
Q ss_pred -CCcEEEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||....... .+.++..+++|+.++.++++++.. .+ .++||++||...+... +.
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~ 178 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IP 178 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CS
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CC
Confidence 69999999997654332 334456778999999999887654 23 2589999998765211 11
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+++.++.++ .++++.+++||.+..+.. ..+...........
T Consensus 179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~-----------~~~~~~~~~~~~~~----------- 236 (276)
T 3r1i_A 179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELV-----------EPLADYHALWEPKI----------- 236 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTT-----------GGGGGGHHHHGGGS-----------
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc-----------ccchHHHHHHHhcC-----------
Confidence 245689999999999999988874 379999999999987621 11111122221111
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+...+|+|+++++++.... ....|+++++.+|..
T Consensus 237 ------p~~r~~~pedvA~~v~fL~s~~~-~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 237 ------PLGRMGRPEELTGLYLYLASAAS-SYMTGSDIVIDGGYT 274 (276)
T ss_dssp ------TTSSCBCGGGSHHHHHHHHSGGG-TTCCSCEEEESTTTT
T ss_pred ------CCCCCcCHHHHHHHHHHHcCccc-cCccCcEEEECcCcc
Confidence 11236789999999999987522 346789999987753
No 194
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.92 E-value=4.1e-24 Score=187.17 Aligned_cols=225 Identities=14% Similarity=0.093 Sum_probs=163.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+... .+.++.++.+|++|.+++.++++..
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK---YGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999866554444443111 1346788999999999998887632
Q ss_pred -CCcEEEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEecccc-ccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSAT-AYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~-~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||....... .+.+...+++|+.++.++++++. +.+.++||++||.. .+ .+.
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~ 166 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------VTM 166 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------CCS
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------cCC
Confidence 69999999997643322 23445688899999999988764 34567999999987 32 123
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH---HHHHHHHcCCCCceEEec
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM---PFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g 222 (347)
.+...|+.+|.+.+.+++.++.+. .++++++++||.+..+.. ..+. ..........
T Consensus 167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~-----------~~~~~~~~~~~~~~~~~-------- 227 (267)
T 1vl8_A 167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT-----------EAVFSDPEKLDYMLKRI-------- 227 (267)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT-----------HHHHTCHHHHHHHHHTC--------
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccc-----------cccccChHHHHHHHhhC--------
Confidence 445789999999999999887764 389999999999887520 0010 1111121111
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++.+|+|+++++++.... ....|+++++.+|.
T Consensus 228 ---------p~~~~~~p~dvA~~v~~l~s~~~-~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 228 ---------PLGRTGVPEDLKGVAVFLASEEA-KYVTGQIIFVDGGW 264 (267)
T ss_dssp ---------TTSSCBCGGGGHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred ---------CCCCCcCHHHHHHHHHHHcCccc-cCCcCCeEEECCCC
Confidence 01136789999999999987522 24578899998774
No 195
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.92 E-value=6.6e-24 Score=181.98 Aligned_cols=216 Identities=14% Similarity=0.103 Sum_probs=161.0
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+|+||||++.||++++++|+++|++|++++|+.+......+ ...++..+.+|++|++++++++++.
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK--------ERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--------TCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hcCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999987544332221 1457888999999999998877542
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|++|||||...... +.++++..+++|+.++..+.+++... +-+++|++||...+. +..
T Consensus 73 ~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~-----------~~~ 141 (247)
T 3ged_A 73 LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ-----------SEP 141 (247)
T ss_dssp HSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS-----------CCT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc-----------CCC
Confidence 6999999999765433 34456778999999999888765532 236999999987652 333
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
....|+.||.+...+.+.++.++ +++++.++-||.+--+.. ..+. ......- ++
T Consensus 142 ~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~-----------~~~~---~~~~~~~--Pl--------- 196 (247)
T 3ged_A 142 DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQ-----------QEFT---QEDCAAI--PA--------- 196 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------------CC---HHHHHTS--TT---------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCc-----------HHHH---HHHHhcC--CC---------
Confidence 45689999999999999998886 579999999998765421 0111 1111110 11
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
+ -+...+|+|+++.+++.. +...|+++.|.+|.
T Consensus 197 --~----R~g~pediA~~v~fL~s~---~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 197 --G----KVGTPKDISNMVLFLCQQ---DFITGETIIVDGGM 229 (247)
T ss_dssp --S----SCBCHHHHHHHHHHHHHC---SSCCSCEEEESTTG
T ss_pred --C----CCcCHHHHHHHHHHHHhC---CCCCCCeEEECcCH
Confidence 1 145789999999999975 46788999998774
No 196
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.92 E-value=1.8e-24 Score=189.94 Aligned_cols=225 Identities=14% Similarity=0.074 Sum_probs=163.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh-HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS-EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+.... +...+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE----KGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999865433 222333332 2457889999999999998888642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 173 (271)
T 4iin_A 105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER-----------GN 173 (271)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CC
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC-----------CC
Confidence 6999999999765432 234456788999999998877754 34567999999987752 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.+|.+.+.+++.++.+. .++++.+++||.+..+... .+....... +.
T Consensus 174 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----------~~~~~~~~~----------~~--- 229 (271)
T 4iin_A 174 MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA-----------NLKDELKAD----------YV--- 229 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------------------------CG---
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh-----------hhcHHHHHH----------HH---
Confidence 456789999999999999888773 4899999999998875210 011000000 00
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.......+.+.+|+|+++.+++.... ....|+++++.+|.
T Consensus 230 ---~~~~~~~~~~p~dvA~~i~~l~s~~~-~~itG~~i~vdGG~ 269 (271)
T 4iin_A 230 ---KNIPLNRLGSAKEVAEAVAFLLSDHS-SYITGETLKVNGGL 269 (271)
T ss_dssp ---GGCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred ---hcCCcCCCcCHHHHHHHHHHHhCCCc-CCCcCCEEEeCCCe
Confidence 01122347899999999999987632 34678999998774
No 197
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.92 E-value=2.8e-24 Score=188.19 Aligned_cols=228 Identities=16% Similarity=0.139 Sum_probs=164.8
Q ss_pred ceEEEEcCC--CcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 3 KNILVIGGV--GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 3 ~~vlItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+++||||+ |+||++++++|+++|++|++++|+. ......+.+.... ....++.+|++|.+++.++++..
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL----GSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT----TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc----CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 579999999 9999999999999999999999876 3333333333321 23478899999999998887632
Q ss_pred --CCcEEEEccccccC----C-----ccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAV----G-----ESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 --~~d~vih~a~~~~~----~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||.... . ...+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~---------- 154 (265)
T 1qsg_A 85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER---------- 154 (265)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc----------
Confidence 58999999997542 1 223455678999999999999998764 124999999987752
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+..+...|+.||.+.+.+++.++.+. .++++++++||.+++|.... . .....+...+.... +
T Consensus 155 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~-~~~~~~~~~~~~~~--p----- 218 (265)
T 1qsg_A 155 -AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-------I-KDFRKMLAHCEAVT--P----- 218 (265)
T ss_dssp -BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG-------S-TTHHHHHHHHHHHS--T-----
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc-------c-cccHHHHHHHHhcC--C-----
Confidence 33445789999999999999888774 37999999999999873110 0 01112222222211 0
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
...+.+++|+|+++++++.... ....+++|++.+|..++
T Consensus 219 ----------~~~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 219 ----------IRRTVTIEDVGNSAAFLCSDLS-AGISGEVVHVDGGFSIA 257 (265)
T ss_dssp ----------TSSCCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTGGGB
T ss_pred ----------CCCCCCHHHHHHHHHHHhCchh-cCccCCEEEECCCcCCC
Confidence 1126789999999999886522 23567899998886554
No 198
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.92 E-value=1.9e-24 Score=188.30 Aligned_cols=227 Identities=14% Similarity=0.067 Sum_probs=166.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEe-CCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVD-NLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++ |+........+.+... ..++.++.+|++|.+++.++++..
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL----GFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----CCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999999887 5555444444444332 457889999999999998887643
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+|||+||...... ..+.+...+++|+.++.++++++ ++.+.++||++||...+. +.
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 157 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQ 157 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG-----------SC
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc-----------CC
Confidence 6899999999765332 23445678999999988887665 445667999999987752 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+++.++.+. .++++.+++||.+..+... .........+....
T Consensus 158 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----------~~~~~~~~~~~~~~----------- 216 (256)
T 3ezl_A 158 FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK----------AIRPDVLEKIVATI----------- 216 (256)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----------TSCHHHHHHHHHHS-----------
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc----------ccCHHHHHHHHhcC-----------
Confidence 456789999999999999888774 3799999999998875200 00111222222211
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+.+.+|+|+++.+++.... ....|++|++.+|..+
T Consensus 217 ------~~~~~~~~~dva~~~~~l~s~~~-~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 217 ------PVRRLGSPDEIGSIVAWLASEES-GFSTGADFSLNGGLHM 255 (256)
T ss_dssp ------TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSCC
T ss_pred ------CCCCCcCHHHHHHHHHHHhCCcc-cCCcCcEEEECCCEeC
Confidence 11236789999999999886522 3467899999887644
No 199
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.92 E-value=7.1e-25 Score=192.34 Aligned_cols=229 Identities=14% Similarity=0.066 Sum_probs=163.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch-hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA-SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|+.|+++++.... .......+.. .+.++.++.+|++|.+++.++++..
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD----AGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT----TTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999998854432 2222222221 2457899999999999998887643
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +.
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 169 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR-----------GA 169 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------CC
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc-----------CC
Confidence 6999999999764432 3344566899999999999887643 4567999999987652 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+++.++.++ .++++.+++||.+..+... .+.. ...... + .
T Consensus 170 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----------~~~~---~~~~~~---~---~--- 226 (269)
T 3gk3_A 170 FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVE-----------AVPQ---DVLEAK---I---L--- 226 (269)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT-----------C----------CC---S---G---
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhh-----------hhch---hHHHHH---h---h---
Confidence 456789999999999998887774 3799999999999876311 0100 000000 0 0
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.......+.+++|+|+++.+++... .....|+++++.+|..+|
T Consensus 227 ---~~~~~~~~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 227 ---PQIPVGRLGRPDEVAALIAFLCSDD-AGFVTGADLAINGGMHMS 269 (269)
T ss_dssp ---GGCTTSSCBCHHHHHHHHHHHTSTT-CTTCCSCEEEESTTSCCC
T ss_pred ---hcCCcCCccCHHHHHHHHHHHhCCC-cCCeeCcEEEECCCEeCc
Confidence 0111234678999999999988762 234678999999887653
No 200
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.92 E-value=2.3e-24 Score=190.20 Aligned_cols=240 Identities=12% Similarity=0.065 Sum_probs=164.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +....++.++.+|++|.+++.++++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS-GVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999999999866554444443321 000116888999999999998887642
Q ss_pred -CCcEEEEccccccCCc--------cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE--------SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+ ++||++||...+...
T Consensus 85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-------- 155 (280)
T 1xkq_A 85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA-------- 155 (280)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC--------
T ss_pred CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC--------
Confidence 5999999999754322 2234567889999999999887664 34 799999998876311
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
..+...|+.+|.+.+.+++.++.+. .++++++++||.+.+|..... ...................
T Consensus 156 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~------ 222 (280)
T 1xkq_A 156 --QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM-----GMPDQASQKFYNFMASHKE------ 222 (280)
T ss_dssp --CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT-----TCCHHHHHHHHHHHHHCTT------
T ss_pred --CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccc-----ccccccccchHHHHHHHHc------
Confidence 1345689999999999999887663 489999999999998621000 0000000000001000000
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
......+.+.+|+|+++++++.........++++++.+|..+
T Consensus 223 -------~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 223 -------CIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 264 (280)
T ss_dssp -------TCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred -------CCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence 001124789999999999988652012456899999887543
No 201
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.92 E-value=1.7e-24 Score=189.34 Aligned_cols=220 Identities=14% Similarity=0.114 Sum_probs=159.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+... ..++.++.+|++|.+++.++++..
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999999987653 236788999999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 141 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI-----------ITK 141 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc-----------CCC
Confidence 5999999999754332 3345567899999999999887764 3457999999998763 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhcC-CceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC-----ceEEec
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSDS-EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP-----ALTVFG 222 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~g 222 (347)
+...|+.||.+.+.+++.++.++. .+++++++||.+.++ +...+.....+... ....+.
T Consensus 142 ~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (264)
T 2dtx_A 142 NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTP---------------LVRKAAELEVGSDPMRIEKKISEWG 206 (264)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSH---------------HHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCc---------------chhhhhhcccccCchhhHHHHHHHH
Confidence 567899999999999999988752 289999999998765 11111000000000 000000
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.......+++++|+|+++++++.... ....++++++.++.
T Consensus 207 ------~~~p~~~~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 207 ------HEHPMQRIGKPQEVASAVAFLASREA-SFITGTCLYVDGGL 246 (264)
T ss_dssp ------HHSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred ------hcCCCCCCcCHHHHHHHHHHHhCchh-cCCCCcEEEECCCc
Confidence 00011247899999999999987522 24578999998774
No 202
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.92 E-value=2.3e-24 Score=187.36 Aligned_cols=226 Identities=15% Similarity=0.146 Sum_probs=160.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+ +.++.++.+|++|.+++.++++..
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-------GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-------CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999998765443333222 347888999999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++..+.+++ ++.+ ++||++||...+. +..
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~ 146 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL-----------PIE 146 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS-----------CCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC-----------CCC
Confidence 5899999999754322 23445678899999888776654 3445 7999999998763 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--C--CceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--S--EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
+...|+.||.+.+.+++.++.+. . +++++++|||.+++|..... .. ... ..........
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~--~~----~~~---~~~~~~~~~~-------- 209 (253)
T 1hxh_A 147 QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS--LP----KGV---SKEMVLHDPK-------- 209 (253)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH--SC----TTC---CHHHHBCBTT--------
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc--cc----hhh---hHHHHhhhhc--------
Confidence 45689999999999999887764 2 79999999999998620000 00 000 0000000000
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
......+.+.+|+|+++.+++.... ....++.+++.+|.
T Consensus 210 -----~~p~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 210 -----LNRAGRAYMPERIAQLVLFLASDES-SVMSGSELHADNSI 248 (253)
T ss_dssp -----TBTTCCEECHHHHHHHHHHHHSGGG-TTCCSCEEEESSSC
T ss_pred -----cCccCCCCCHHHHHHHHHHHcCccc-cCCCCcEEEECCCc
Confidence 0111247899999999999987622 23568999998775
No 203
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.92 E-value=4.3e-24 Score=183.45 Aligned_cols=168 Identities=17% Similarity=0.187 Sum_probs=127.1
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+|+||||+|+||++++++|+++|++|++++|+....+...+.+ .++.++.+|++|.+++.++++..
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL--------EGALPLPGDVREEGDWARAVAAMEEA 75 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--------TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------hhceEEEecCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999998754433222211 26788999999999998887632
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHH----HHHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEV----MAAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+|||+||...... ..+.+...+++|+.++.++++. +++.+.++||++||...+. +.
T Consensus 76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 144 (234)
T 2ehd_A 76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN-----------PF 144 (234)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS-----------CC
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC-----------CC
Confidence 6899999999754322 2334567889999999866554 4455678999999988763 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA 187 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 187 (347)
.+...|+.+|.+.+.+++.++.+. .+++++++|||.+..+
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 186 (234)
T 2ehd_A 145 KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTG 186 (234)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCC
Confidence 456789999999999998877653 3899999999987764
No 204
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=5.7e-24 Score=185.47 Aligned_cols=232 Identities=18% Similarity=0.101 Sum_probs=162.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEe-CCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVD-NLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|+++. |+........+.+... +.++.++.+|++|.+++.+++++.
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL----GRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT----TSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999884 4444444444444332 457889999999999999888643
Q ss_pred --CCcEEEEccccc-cCCc----cccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLK-AVGE----SVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 --~~d~vih~a~~~-~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||.. .... ..+.+...+++|+.++.++++++...- .++||++||...+. .+..
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~ 153 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD----------GGGP 153 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH----------CCST
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc----------CCCC
Confidence 699999999965 2221 233446789999999999999987652 24899999987751 1233
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
....|+.||.+.+.+.+.++.++ +.+++.++.||.+..+..... ..+..... + .
T Consensus 154 ~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~----------~~~~~~~~-------~---~----- 208 (259)
T 3edm_A 154 GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTF----------TKPEVRER-------V---A----- 208 (259)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccc----------cChHHHHH-------H---H-----
Confidence 45689999999999999998885 348999999999887521000 00000000 0 0
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHH
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVL 274 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~ 274 (347)
.......+.+++|+|+++.+++.... ....|++|++.+|...+..
T Consensus 209 -~~~p~~r~~~pedva~~v~~L~s~~~-~~itG~~i~vdGg~~~~~~ 253 (259)
T 3edm_A 209 -GATSLKREGSSEDVAGLVAFLASDDA-AYVTGACYDINGGVLFSEG 253 (259)
T ss_dssp -------CCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESBCSSBC--
T ss_pred -hcCCCCCCcCHHHHHHHHHHHcCccc-cCccCCEEEECCCcCCCCC
Confidence 11223456789999999999987622 3467899999888755443
No 205
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.92 E-value=2e-24 Score=189.37 Aligned_cols=226 Identities=15% Similarity=0.087 Sum_probs=161.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+.... ......+.+|++|.+++.++++..
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD--------------VNVSDHFKIDVTNEEEVKEAVEKTTKKY 79 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C--------------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc--------------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999876543 125678899999999999887643
Q ss_pred -CCcEEEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||....... .+.+...+++|+.++.++++++.. .+.++||++||...|. +..
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 148 (269)
T 3vtz_A 80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA-----------ATK 148 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCT
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------CCC
Confidence 69999999997654332 234456788999999999887553 4567999999998873 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCC-CCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGED-PRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.||.+.+.+++.++.++ +++++.+++||.+.++........ .................
T Consensus 149 ~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 214 (269)
T 3vtz_A 149 NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR-------------- 214 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH--------------
T ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh--------------
Confidence 56789999999999999998875 479999999999987510000000 00000000011111111
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
......+.+++|+|+++.+++.... ....|+++++.+|..
T Consensus 215 ---~~p~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 215 ---QHPMGRIGRPEEVAEVVAFLASDRS-SFITGACLTVDGGLL 254 (269)
T ss_dssp ---HSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred ---cCCCCCCcCHHHHHHHHHHHhCCcc-CCCcCcEEEECCCcc
Confidence 1112346789999999999987622 346789999988753
No 206
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.92 E-value=7.1e-24 Score=187.53 Aligned_cols=225 Identities=14% Similarity=0.039 Sum_probs=162.6
Q ss_pred ceEEEEcCC--CcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 3 KNILVIGGV--GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 3 ~~vlItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+++||||+ |+||+++++.|+++|++|++++|+.. .....+.+.... +.+.++.+|++|.+++.++++..
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF----GSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT----TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc----CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 689999999 99999999999999999999998764 333333333221 23678999999999998887642
Q ss_pred --CCcEEEEccccccC--------CccccCcchhhhhhhhHHHHHHHHHHHcC---CCeEEEeccccccCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAV--------GESVQKPLPYFDNNLTGTITLLEVMAAHG---CKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 --~~d~vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||.... ....+.+...+++|+.++.++++++...- .++||++||...+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~---------- 166 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK---------- 166 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----------
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----------
Confidence 68999999997542 12234456789999999999999987642 36999999987652
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+......|+.||.+.+.+++.++.++ .++++++++||.+++|.... . .........+.... +
T Consensus 167 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~-~~~~~~~~~~~~~~--p----- 230 (285)
T 2p91_A 167 -VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS-------I-TGFHLLMEHTTKVN--P----- 230 (285)
T ss_dssp -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC---------C-TTHHHHHHHHHHHS--T-----
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc-------c-cchHHHHHHHHhcC--C-----
Confidence 33455789999999999999887764 48999999999999873110 0 01112222222211 0
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
...+.+++|+|+++++++.... ....+++|++.++.
T Consensus 231 ----------~~~~~~~~dva~~~~~l~s~~~-~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 231 ----------FGKPITIEDVGDTAVFLCSDWA-RAITGEVVHVDNGY 266 (285)
T ss_dssp ----------TSSCCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTG
T ss_pred ----------CCCCcCHHHHHHHHHHHcCCcc-cCCCCCEEEECCCc
Confidence 0125689999999999886522 23567899998774
No 207
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.92 E-value=5.9e-24 Score=186.04 Aligned_cols=240 Identities=13% Similarity=0.046 Sum_probs=168.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+....+ ..++.++.+|++|.+++.++++..
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP--GARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999987766655555544211 235888999999999998887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 154 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ-----------PEP 154 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-----------CCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-----------CCC
Confidence 6899999999754432 2344567899999999999988754 3456899999987752 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.||.+.+.+.+.++.++ .++++.+++||.+..|..................+.........
T Consensus 155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 223 (265)
T 3lf2_A 155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQ----------- 223 (265)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTT-----------
T ss_pred CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccC-----------
Confidence 56789999999999999888775 37999999999988751000000000000000011111111000
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.....+...+|+|+++++++.... ....|+++++.+|..
T Consensus 224 ----~p~~r~~~pedvA~~v~fL~s~~~-~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 224 ----IPLGRLGKPIEAARAILFLASPLS-AYTTGSHIDVSGGLS 262 (265)
T ss_dssp ----CTTCSCBCHHHHHHHHHHHHSGGG-TTCCSEEEEESSSCC
T ss_pred ----CCcCCCcCHHHHHHHHHHHhCchh-cCcCCCEEEECCCCc
Confidence 011236789999999999987522 346789999987753
No 208
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.92 E-value=1.7e-24 Score=190.47 Aligned_cols=224 Identities=13% Similarity=0.100 Sum_probs=160.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+.. ..++.++.+|++|.+++.++++..
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-----YGDCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-----SSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 37899999999999999999999999999999876554433333321 126788899999999998887632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCC----CeEEEeccccccCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGC----KNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~----~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+. ++||++||...+..
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~--------- 174 (276)
T 2b4q_A 104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA--------- 174 (276)
T ss_dssp SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC---------
Confidence 6999999999754322 233456788999999988877654 3344 79999999887632
Q ss_pred CCCCCCC-chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHc-CCCCceE
Q 040584 145 FPLQAMN-PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAV-GRRPALT 219 (347)
Q Consensus 145 ~~~~~~~-~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~ 219 (347)
..... .|+.||.+.+.+++.++.+. .++++++++||.+..+.. ..+.. ....... ...
T Consensus 175 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~~~~~~~~~~~~---- 237 (276)
T 2b4q_A 175 --MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT-----------RHIANDPQALEADSASI---- 237 (276)
T ss_dssp --CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTT-----------HHHHHCHHHHHHHHHTS----
T ss_pred --CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcch-----------hhcchhHHHHHHhhcCC----
Confidence 22334 89999999999999888764 389999999999887520 00100 1111111 010
Q ss_pred EecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 220 VFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 220 ~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+.+.+|+|+++++++.... ....++++++.+|.
T Consensus 238 ------------p~~r~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 238 ------------PMGRWGRPEEMAALAISLAGTAG-AYMTGNVIPIDGGF 274 (276)
T ss_dssp ------------TTSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred ------------CCCCcCCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCc
Confidence 01236789999999999987622 24578999998774
No 209
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.92 E-value=1.4e-24 Score=190.24 Aligned_cols=233 Identities=20% Similarity=0.150 Sum_probs=161.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+........+.+.... .+.++.++.+|++|.+++.++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF--EPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS--CGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc--CCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999999999987655443333332211 1236788999999999999887642
Q ss_pred CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHH----HHHHcC---CCeEEEeccccccCCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLE----VMAAHG---CKNLVFSSSATAYGWPKVVPCTEEFPLQAM 150 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~----~~~~~~---~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~ 150 (347)
++|+||||||... .+.+...+++|+.++..+.+ .+++.+ .++||++||...+. +....
T Consensus 86 ~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~ 150 (267)
T 2gdz_A 86 RLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PVAQQ 150 (267)
T ss_dssp CCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTTC
T ss_pred CCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC-----------CCCCC
Confidence 5899999999753 34567889999997766554 444432 56999999998763 23345
Q ss_pred CchhhhHHHHHHHHHHHh--hh--cCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCce-EEecccC
Q 040584 151 NPYGRSKLFIEEICRDVH--RS--DSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPAL-TVFGTDY 225 (347)
Q Consensus 151 ~~Y~~sK~~~e~~~~~~~--~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 225 (347)
..|+.||.+.+.+++.++ .+ ..++++++++||.+.++... .+... ... +....+ ....
T Consensus 151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~--~~~-~~~~~~~~~~~--- 213 (267)
T 2gdz_A 151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE-----------SIEKE--ENM-GQYIEYKDHIK--- 213 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH-----------GGGCH--HHH-GGGGGGHHHHH---
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhh-----------ccccc--ccc-chhhhHHHHHH---
Confidence 689999999999998742 22 24899999999998875100 00000 000 000000 0000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
.......+++++|+|+++++++.. ....+++|++.+++..++.|
T Consensus 214 ---~~~~~~~~~~~~dvA~~v~~l~s~---~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 214 ---DMIKYYGILDPPLIANGLITLIED---DALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp ---HHHHHHCCBCHHHHHHHHHHHHHC---TTCSSCEEEEETTTEEEECC
T ss_pred ---HHhccccCCCHHHHHHHHHHHhcC---cCCCCcEEEecCCCcccccC
Confidence 001122468999999999999986 34678999999888777665
No 210
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.92 E-value=1.6e-23 Score=183.81 Aligned_cols=225 Identities=16% Similarity=0.138 Sum_probs=164.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc-hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN-ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|+++.++.. ..+...+.+... +.++.++.+|++|.+++.+++++.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA----GGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999866543 333334444332 457889999999999998887643
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... +.+.+...+++|+.++.++++++... +.++||++||....- .+..+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~ 176 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPG 176 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTT
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCC
Confidence 6999999999764433 33455678999999999999988765 346999999965431 12345
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
...|+.+|.+.+.+.+.++.++ .++++.+++||.+.++.... ..... ....... +
T Consensus 177 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--------~~~~~---~~~~~~~--~---------- 233 (271)
T 3v2g_A 177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA--------DGDHA---EAQRERI--A---------- 233 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS--------SCSSH---HHHHHTC--T----------
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc--------cchhH---HHHHhcC--C----------
Confidence 6789999999999999888775 37999999999999863110 00111 1111111 0
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
...+...+|+|+++.+++... .....|+++++.+|.
T Consensus 234 -----~~r~~~pedvA~~v~fL~s~~-~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 234 -----TGSYGEPQDIAGLVAWLAGPQ-GKFVTGASLTIDGGA 269 (271)
T ss_dssp -----TSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred -----CCCCCCHHHHHHHHHHHhCcc-cCCccCCEEEeCcCc
Confidence 112568999999999988652 234678999998764
No 211
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.92 E-value=2.4e-24 Score=187.13 Aligned_cols=216 Identities=16% Similarity=0.123 Sum_probs=158.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+ .+.++.+|++|.+++.+++++.
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~Dl~d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------------GFLAVKCDITDTEQVEQAYKEIEETH 85 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999998765432 3678899999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~ 154 (253)
T 2nm0_A 86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL-----------GSA 154 (253)
T ss_dssp CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-----------CHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------CCC
Confidence 5899999999754322 4456778999999999999886553 3567999999987642 222
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.+|.+.+.+.+.++.+. .++++++++||.+..+... ..... .........
T Consensus 155 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~-------~~~~~---~~~~~~~~~------------ 212 (253)
T 2nm0_A 155 GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK-------VLTDE---QRANIVSQV------------ 212 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------------CHHHHHTTC------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh-------hcCHH---HHHHHHhcC------------
Confidence 34679999999999999888774 4799999999988765210 00000 011111110
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+++.+|+|+++.+++.... ....++.+++.+|..+
T Consensus 213 -----p~~~~~~p~dvA~~i~~l~s~~~-~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 213 -----PLGRYARPEEIAATVRFLASDDA-SYITGAVIPVDGGLGM 251 (253)
T ss_dssp -----TTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTC
T ss_pred -----CCCCCcCHHHHHHHHHHHhCccc-cCCcCcEEEECCcccc
Confidence 01236899999999999987622 2457899999877543
No 212
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.92 E-value=3.5e-24 Score=189.35 Aligned_cols=237 Identities=19% Similarity=0.125 Sum_probs=164.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch-hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA-SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+... .+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN----GSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh----CCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999987653 22223333332 457888999999999988877532
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+.. ...+
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~ 174 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AVPK 174 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SCSS
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC----------CCCC
Confidence 6999999999764322 23455678999999999999998876 5679999999876521 1113
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCC--CCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGED--PRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
...|+.||.+.+.+++.++.+. .++++++++||.+.++........ +.. ...-......+....
T Consensus 175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------- 242 (283)
T 1g0o_A 175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNG-ENLSNEEVDEYAAVQ----------- 242 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTC-TTCCHHHHHHHHHHH-----------
T ss_pred CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccc-cccCHHHHHHHHhhc-----------
Confidence 5689999999999999887764 379999999999987520000000 000 000001111111100
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
......+.+.+|+|+++.+++.... ....|+++++.+|.
T Consensus 243 ----~~p~~r~~~p~dvA~~v~~l~s~~~-~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 243 ----WSPLRRVGLPIDIARVVCFLASNDG-GWVTGKVIGIDGGA 281 (283)
T ss_dssp ----SCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred ----CCCCCCCcCHHHHHHHHHHHhCccc-cCcCCCEEEeCCCc
Confidence 0011236789999999999997522 24578999998774
No 213
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.92 E-value=6.1e-24 Score=184.52 Aligned_cols=208 Identities=13% Similarity=0.121 Sum_probs=149.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA----GGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 378999999999999999999999999999999888877766666553 457889999999999999888643
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +...
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 151 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR-----------GGSG 151 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC-----------CCTT
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC-----------CCCC
Confidence 6899999999765432 234456789999999999888753 44567999999987752 3445
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceE-EEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKI-ILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~-~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.||.+.+.+.+.++.++ .++++ .++.||.+..+... ...+ ... ..+.
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~-----------~~~~---~~~----~~~~------- 206 (252)
T 3h7a_A 152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR-----------ERRE---QMF----GKDA------- 206 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh-----------ccch---hhh----hhhh-------
Confidence 6789999999999999888775 37888 78999888765210 0000 000 0000
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
...... ++..+|+|+++++++..
T Consensus 207 --~~~~~~-~~~pedvA~~~~~l~s~ 229 (252)
T 3h7a_A 207 --LANPDL-LMPPAAVAGAYWQLYQQ 229 (252)
T ss_dssp ----------CCHHHHHHHHHHHHHC
T ss_pred --hcCCcc-CCCHHHHHHHHHHHHhC
Confidence 111223 78999999999999986
No 214
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.92 E-value=2.2e-23 Score=179.17 Aligned_cols=219 Identities=17% Similarity=0.139 Sum_probs=162.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+.+...+.+... .+.++.++.+|++|.+++.+++++.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE---QGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---cCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999999877665555554422 2457889999999999999888743
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+++...+++|+.++.++++++... +.+++|++||...+. +...
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~ 147 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR-----------LIPY 147 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-----------CCTT
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc-----------cCCC
Confidence 6999999999765433 34455678999999999999887542 234788887766542 2234
Q ss_pred CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
...|+.+|.+.+.+++.+..+..++++++++||.+-.+..... ..
T Consensus 148 ~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~-------------------~~---------------- 192 (235)
T 3l77_A 148 GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK-------------------PG---------------- 192 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC-------------------SC----------------
T ss_pred cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc-------------------CC----------------
Confidence 4689999999999999986666699999999998876521000 00
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
......++..+|+|+++.+++..... ...++++...++++
T Consensus 193 ~~~~~~~~~p~dva~~v~~l~~~~~~-~~~~~~~~~~~~~~ 232 (235)
T 3l77_A 193 KPKEKGYLKPDEIAEAVRCLLKLPKD-VRVEELMLRSVYQR 232 (235)
T ss_dssp CCGGGTCBCHHHHHHHHHHHHTSCTT-CCCCEEEECCTTSC
T ss_pred cccccCCCCHHHHHHHHHHHHcCCCC-CccceEEEeecccC
Confidence 00111367899999999999987332 34567666655553
No 215
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.6e-24 Score=190.21 Aligned_cols=228 Identities=15% Similarity=0.137 Sum_probs=167.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC---eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY---KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (347)
+|+++||||+|+||++++++|+++|+ .|++++|+....+...+.+..... +.++.++.+|++|.+++.++++..
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP--NAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT--TCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999988 999999987766655555544311 346888999999999999998754
Q ss_pred ----CCcEEEEcccccc-CC----ccccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 ----KFDAVIHFAGLKA-VG----ESVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 ----~~d~vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||... .. ...+++...+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~---------- 180 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD---------- 180 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC----------
Confidence 6999999999653 11 133456778999999999998887 445667999999987752
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+......|+.||.+.+.+.+.++.+. .++++.+++||.+..+... ................
T Consensus 181 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~-------~~~~~~~~~~~~~~~~--------- 243 (287)
T 3rku_A 181 -AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL-------VRYRGNEEQAKNVYKD--------- 243 (287)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH-------HHTTTCHHHHHHHHTT---------
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc-------ccccCcHHHHHHhhcc---------
Confidence 34456789999999999999998885 4799999999998875100 0000000111111110
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
..++..+|+|+++++++.... ....++++++.+++.
T Consensus 244 -----------~~p~~pedvA~~v~~l~s~~~-~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 244 -----------TTPLMADDVADLIVYATSRKQ-NTVIADTLIFPTNQA 279 (287)
T ss_dssp -----------SCCEEHHHHHHHHHHHHTSCT-TEEEEEEEEEETTEE
T ss_pred -----------cCCCCHHHHHHHHHHHhCCCC-CeEecceEEeeCCCC
Confidence 113489999999999998622 234678888877764
No 216
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.92 E-value=1.9e-23 Score=186.18 Aligned_cols=214 Identities=20% Similarity=0.198 Sum_probs=155.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+|+||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|++|.+++.++++..
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ----GFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 68999999999999999999999999999999877666555555443 457889999999999999887643
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+.+...+++|+.++.++++++.. .+ .++||++||...+. +..
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 176 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV-----------PNA 176 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-----------CCT
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CCC
Confidence 6999999999764432 3344567899999999999887643 34 46999999988762 344
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHc---CC-CCceEEec
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAV---GR-RPALTVFG 222 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~g 222 (347)
....|+.||.+.+.+++.++.+. .++++++++||.+..+ +..-...... +. ......++
T Consensus 177 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~---------------~~~~~~~~~~~~~~~~~~~~~~~~ 241 (301)
T 3tjr_A 177 GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK---------------LVSNSERIRGADYGMSATPEGAFG 241 (301)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS---------------HHHHHHHHC---------------
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc---------------cccccccccchhhccccChhhhcc
Confidence 56789999999999998887765 3799999999988765 2211111000 00 00111111
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
.......+++++|+|++++.+++.
T Consensus 242 ------~~~~~~~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 242 ------PLPTQDESVSADDVARLTADAILA 265 (301)
T ss_dssp -------------CCCHHHHHHHHHHHHHH
T ss_pred ------ccccccCCCCHHHHHHHHHHHHhc
Confidence 122345689999999999999988
No 217
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.92 E-value=1.1e-23 Score=181.59 Aligned_cols=221 Identities=14% Similarity=0.113 Sum_probs=157.6
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+++||||+|+||++++++|+++|++|++++|+... ..+.+ ++..+.+|++| +++.++++..
T Consensus 1 ~~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---------~~~~~~~D~~~-~~~~~~~~~~~~~ 67 (239)
T 2ekp_A 1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---------GAVPLPTDLEK-DDPKGLVKRALEA 67 (239)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---------TCEEEECCTTT-SCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---------CcEEEecCCch-HHHHHHHHHHHHH
Confidence 78999999999999999999999999999999997654 11211 26788999999 7776665421
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+... +.
T Consensus 68 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~ 138 (239)
T 2ekp_A 68 LGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------GP 138 (239)
T ss_dssp HTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------TT
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC---------CC
Confidence 6999999999754322 234556788999999999888764 4467799999999887421 11
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.+...|+.||.+.+.+.+.++.+. .++++++++||.+.++... ... ........... ..
T Consensus 139 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~~~-~~~~~~~~~~~-~~---------- 199 (239)
T 2ekp_A 139 VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL-------PLR-QNPELYEPITA-RI---------- 199 (239)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-------HHH-TCHHHHHHHHT-TC----------
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh-------ccc-cCHHHHHHHHh-cC----------
Confidence 456789999999999999887764 3799999999999876200 000 00011112211 10
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+.+.+|+|+++.+++.... ....++.+++.+|.
T Consensus 200 ------p~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 200 ------PMGRWARPEEIARVAAVLCGDEA-EYLTGQAVAVDGGF 236 (239)
T ss_dssp ------TTSSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTT
T ss_pred ------CCCCCcCHHHHHHHHHHHcCchh-cCCCCCEEEECCCc
Confidence 11236789999999999886522 23578899997764
No 218
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.92 E-value=2.9e-23 Score=179.84 Aligned_cols=219 Identities=16% Similarity=0.190 Sum_probs=156.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+ ..++.++.+|++|.+++.++++..
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 73 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-------GDNLYIAQLDVRNRAAIEEMLASLPAEWC 73 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHTSCTTTC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------cCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 68999999999999999999999999999998765443333322 246888999999999999998753
Q ss_pred CCcEEEEcccccc-CC----ccccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKA-VG----ESVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||... .. .+.+++...+++|+.++.++++++. +.+.++||++||...+. +..
T Consensus 74 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~ 142 (248)
T 3asu_A 74 NIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYA 142 (248)
T ss_dssp CCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CCT
T ss_pred CCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc-----------CCC
Confidence 6999999999752 11 1234556789999999999888765 44567999999988752 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccC-CCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVG-AHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
....|+.||.+.+.+++.++.+. .++++++++||.+.| +... .. . .+......
T Consensus 143 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~-----------~~---~----~~~~~~~~------ 198 (248)
T 3asu_A 143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN-----------VR---F----KGDDGKAE------ 198 (248)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh-----------hc---c----cCchHHHH------
Confidence 56789999999999999988774 379999999999984 4100 00 0 00000000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
.......++..+|+|+++++++.. .....++.+.+.+.
T Consensus 199 ---~~~~~~~~~~p~dvA~~v~~l~s~--~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 199 ---KTYQNTVALTPEDVSEAVWWVSTL--PAHVNINTLEMMPV 236 (248)
T ss_dssp ---------CCBCHHHHHHHHHHHHHS--CTTCCCCEEEECCT
T ss_pred ---HHHhccCCCCHHHHHHHHHHHhcC--CccceeeEEEEccc
Confidence 000011246899999999999986 22356677776544
No 219
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.92 E-value=2.2e-23 Score=185.59 Aligned_cols=238 Identities=15% Similarity=0.134 Sum_probs=165.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc------------hhHHHHHHHHHhhccCCCCeEEEecCCCCHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN------------ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAA 69 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (347)
+|+++||||+|+||++++++|+++|++|++++|+.. ......+.+.. .+.++.++.+|++|.++
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA----LGRRIIASQVDVRDFDA 103 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH----TTCCEEEEECCTTCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh----cCCceEEEECCCCCHHH
Confidence 378999999999999999999999999999988732 22222223322 24578899999999999
Q ss_pred HHHHHccC-----CCcEEEEccccccCCc-----cccCcchhhhhhhhHHHHHHHHHHHc----C-CCeEEEeccccccC
Q 040584 70 LEVVFAGT-----KFDAVIHFAGLKAVGE-----SVQKPLPYFDNNLTGTITLLEVMAAH----G-CKNLVFSSSATAYG 134 (347)
Q Consensus 70 ~~~~~~~~-----~~d~vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~yg 134 (347)
+.++++.. ++|+||||||...... +.+.+...+++|+.++.++++++... + .++||++||...+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~ 183 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR 183 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 99887632 6999999999754332 33455678999999999998876542 2 56999999988762
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCC---CCCCCCCccHHHHHH
Q 040584 135 WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGE---DPRGIPNNLMPFVTQ 209 (347)
Q Consensus 135 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~ 209 (347)
+......|+.||.+.+.+.+.++.++ .++++.+++||.+..|....... ...............
T Consensus 184 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (299)
T 3t7c_A 184 -----------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQV 252 (299)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred -----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHH
Confidence 34456789999999999999888775 37999999999998863110000 000000000000000
Q ss_pred H-HcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 210 V-AVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 210 ~-~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
. .... ... ..+...+|+|+++++++.... ....|+++++.+|..+
T Consensus 253 ~~~~~~---------------~~p-~r~~~pedvA~~v~fL~s~~a-~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 253 ASRQMH---------------VLP-IPYVEPADISNAILFLVSDDA-RYITGVSLPVDGGALL 298 (299)
T ss_dssp HHHHHS---------------SSS-CSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred Hhhhhc---------------ccC-cCCCCHHHHHHHHHHHhCccc-ccCcCCEEeeCCCccc
Confidence 0 0000 001 246789999999999997522 3467899999887643
No 220
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.92 E-value=5.4e-24 Score=184.25 Aligned_cols=226 Identities=12% Similarity=0.052 Sum_probs=159.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 80 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+.+. +.. -.++.++.+|++|.+++.++++.. ++|
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id 76 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-------LEK--YPGIQTRVLDVTKKKQIDQFANEVERLD 76 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG-------GGG--STTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-------HHh--ccCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 3789999999999999999999999999999987543221 110 126788999999999998877644 699
Q ss_pred EEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC-CCC
Q 040584 81 AVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ-AMN 151 (347)
Q Consensus 81 ~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~-~~~ 151 (347)
+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +.. +..
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~ 145 (246)
T 2ag5_A 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV-----------KGVVNRC 145 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT-----------BCCTTBH
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc-----------CCCCCCc
Confidence 9999999754332 233455688999999999988765 34567999999987652 112 456
Q ss_pred chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 152 PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
.|+.+|.+.+.+++.++.+. .+++++++|||.+++|..... ... ...............
T Consensus 146 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~--~~~~~~~~~~~~~~~--------------- 206 (246)
T 2ag5_A 146 VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQER--IQA--RGNPEEARNDFLKRQ--------------- 206 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHH--HHH--SSSHHHHHHHHHHTC---------------
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhh--hhc--ccCcHHHHHHHHhcC---------------
Confidence 89999999999999887764 389999999999998620000 000 000000111111110
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+++.+|+|+++.+++.... ....++++++.+|.
T Consensus 207 --~~~~~~~~~dvA~~v~~l~s~~~-~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 207 --KTGRFATAEEIAMLCVYLASDES-AYVTGNPVIIDGGW 243 (246)
T ss_dssp --TTSSCEEHHHHHHHHHHHHSGGG-TTCCSCEEEECTTG
T ss_pred --CCCCCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCCc
Confidence 01136899999999999986522 23578999998774
No 221
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.92 E-value=2.7e-24 Score=188.79 Aligned_cols=235 Identities=17% Similarity=0.123 Sum_probs=168.2
Q ss_pred CceEEEEcCC--CcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGV--GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+|+||||+ |+||++++++|+++|++|++++|+....+ ..+.+... .+++.++.+|++|.+++.++++..
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAE----FGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHH----TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HHHHHHHH----cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 4899999999 99999999999999999999998844332 33333322 235788999999999999888643
Q ss_pred ---CCcEEEEccccccC----C-----ccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAV----G-----ESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTE 143 (347)
Q Consensus 78 ---~~d~vih~a~~~~~----~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e 143 (347)
++|+||||||.... . ...+.+...+++|+.++.++++++... ..++||++||...+.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------- 159 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER--------- 159 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS---------
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc---------
Confidence 68999999997543 1 233445678999999999999988764 234899999988762
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEe
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVF 221 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
+......|+.||.+.+.+++.++.++ .++++.+++||.+..+... .. ..............
T Consensus 160 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------~~-~~~~~~~~~~~~~~------- 222 (271)
T 3ek2_A 160 --AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAAS-------GI-KSFGKILDFVESNS------- 222 (271)
T ss_dssp --BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----C-------CC-HHHHHHHHHHHHHS-------
T ss_pred --CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhh-------cc-cchHHHHHHHHhcC-------
Confidence 34456789999999999999888764 4799999999999875210 00 00011222222211
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHH
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVA 278 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~ 278 (347)
....+...+|+|+++++++... .....|+++++.+|...++.++++
T Consensus 223 ----------~~~~~~~pedva~~i~~l~s~~-~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 223 ----------PLKRNVTIEQVGNAGAFLLSDL-ASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp ----------TTSSCCCHHHHHHHHHHHHSGG-GTTCCSEEEEESTTGGGBCCCC--
T ss_pred ----------CcCCCCCHHHHHHHHHHHcCcc-cCCeeeeEEEECCCeeeehhhhhh
Confidence 1123568999999999998752 234678999999998877766543
No 222
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.92 E-value=3.5e-23 Score=183.16 Aligned_cols=243 Identities=14% Similarity=0.140 Sum_probs=166.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch------------hHHHHHHHHHhhccCCCCeEEEecCCCCHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA------------SEIAVAKVKELAGYQGNNMTFHKLDLRDKAA 69 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (347)
+|+++||||+|+||++++++|+++|++|++++|+... .....+.+.......+.++.++.+|++|.++
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 90 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA 90 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence 3789999999999999999999999999999886321 1112222222222235678899999999999
Q ss_pred HHHHHccC-----CCcEEEEccccccCCc-----cccCcchhhhhhhhHHHHHHHHHHHc----C-CCeEEEeccccccC
Q 040584 70 LEVVFAGT-----KFDAVIHFAGLKAVGE-----SVQKPLPYFDNNLTGTITLLEVMAAH----G-CKNLVFSSSATAYG 134 (347)
Q Consensus 70 ~~~~~~~~-----~~d~vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~~yg 134 (347)
+.++++.. ++|+||||||...... +.+.+...+++|+.++.++++++... + .++||++||...+.
T Consensus 91 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (286)
T 3uve_A 91 LKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK 170 (286)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhcc
Confidence 99887632 6999999999754332 33456678999999999998876542 3 45999999988762
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCC---CCCCCCCccHHHHHH
Q 040584 135 WPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGE---DPRGIPNNLMPFVTQ 209 (347)
Q Consensus 135 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~ 209 (347)
+......|+.||.+.+.+.+.++.++ .++++.++.||.+..|.....+. ...............
T Consensus 171 -----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T 3uve_A 171 -----------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAP 239 (286)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred -----------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHH
Confidence 34456789999999999999888774 37999999999998863110000 000000000000011
Q ss_pred HHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 210 VAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 210 ~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
..... .... ..+.+.+|+|+++++++.... ....|+++++.+|..+
T Consensus 240 ~~~~~--------------~~~p-~r~~~p~dvA~~v~fL~s~~a-~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 240 ICQMF--------------HTLP-IPWVEPIDISNAVLFFASDEA-RYITGVTLPIDAGSCL 285 (286)
T ss_dssp HHHTT--------------CSSS-CSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred HHHhh--------------hccC-CCcCCHHHHHHHHHHHcCccc-cCCcCCEEeECCcccc
Confidence 00000 0111 347899999999999997522 3467899999887644
No 223
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.91 E-value=1.3e-24 Score=188.28 Aligned_cols=223 Identities=18% Similarity=0.141 Sum_probs=163.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-------GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-------CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 479999999999999999999999999999998765554433332 357889999999999999888643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHH----HHHcC-CCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEV----MAAHG-CKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... +.+.+...+++|+.++.+++++ +++.+ .++||++||...+. +.
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 147 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-----------GT 147 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-----------TC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc-----------CC
Confidence 6999999999765432 3345567899999999999887 44545 57999999987762 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.....|+.||.+.+.+.+.++.+. .++++.+++||.+..+... .........+.....
T Consensus 148 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-------~~~~~~~~~~~~~~~------------- 207 (247)
T 3rwb_A 148 PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVK-------ASPHNEAFGFVEMLQ------------- 207 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------TSGGGGGHHHHHHHS-------------
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccc-------ccChhHHHHHHhccc-------------
Confidence 456789999999999999888774 3799999999998865210 000001111111000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....+...+|+|+++.+++.... ....|+++++.+|.
T Consensus 208 ------~~~r~~~pedva~~v~~L~s~~~-~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 208 ------AMKGKGQPEHIADVVSFLASDDA-RWITGQTLNVDAGM 244 (247)
T ss_dssp ------SSCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred ------ccCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEECCCc
Confidence 11125679999999999987622 34678999998774
No 224
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.91 E-value=6.9e-24 Score=189.30 Aligned_cols=234 Identities=12% Similarity=0.062 Sum_probs=166.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhc-cCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAG-YQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+........+.+..... ..+.++.++.+|++|.+++.++++..
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 97 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 97 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999986655554444433111 12457889999999999999888642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+ +.
T Consensus 98 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~~ 165 (303)
T 1yxm_A 98 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------GF 165 (303)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------CC
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeeccc------------CC
Confidence 5999999999643322 22345668899999999999987652 34689999998732 22
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEeccc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~ 224 (347)
.....|+.+|.+.+.+.+.++.+. .+++++++|||.++||... . ... ...+ ........
T Consensus 166 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~-~~~-~~~~~~~~~~~~~----------- 227 (303)
T 1yxm_A 166 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV-----E-NYG-SWGQSFFEGSFQK----------- 227 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGG-----T-TSG-GGGGGGGTTGGGG-----------
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhh-----h-hcc-ccchHHHHHHHhc-----------
Confidence 345689999999999999888774 3799999999999997200 0 000 0000 01110000
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
.....+++++|+|+++++++.... ....++.+++.+|...+
T Consensus 228 ------~p~~~~~~~~dvA~~i~~l~~~~~-~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 228 ------IPAKRIGVPEEVSSVVCFLLSPAA-SFITGQSVDVDGGRSLY 268 (303)
T ss_dssp ------STTSSCBCTHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGC
T ss_pred ------CcccCCCCHHHHHHHHHHHhCccc-ccCCCcEEEECCCeecc
Confidence 011237899999999999986522 23568999998886544
No 225
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.91 E-value=1.4e-23 Score=184.85 Aligned_cols=237 Identities=16% Similarity=0.109 Sum_probs=163.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc----------hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN----------ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV 72 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (347)
|+++||||+|+||++++++|+++|++|++++|... ..... +.........+.++.++.+|++|.+++.+
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 90 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDL-SETVRLVEAANRRIVAAVVDTRDFDRLRK 90 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHH-HHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 78999999999999999999999999999988421 11111 11111111234678899999999999998
Q ss_pred HHccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCC
Q 040584 73 VFAGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKV 138 (347)
Q Consensus 73 ~~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~ 138 (347)
++++. ++|+||||||...... +.+.++..+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---- 166 (277)
T 3tsc_A 91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK---- 166 (277)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC----
Confidence 87642 6999999999765432 3345567899999999999887543 33 45999999988762
Q ss_pred CCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC
Q 040584 139 VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216 (347)
Q Consensus 139 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
+......|+.||.+.+.+.+.++.++ .++++.+++||.+..+.. .................
T Consensus 167 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~----------~~~~~~~~~~~~~~~~~ 229 (277)
T 3tsc_A 167 -------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG----------SGDMVTAVGQAMETNPQ 229 (277)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGG----------SHHHHHHHHHHHHTCGG
T ss_pred -------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcc----------cchhhhhhhhcccccHH
Confidence 33445789999999999999888875 379999999999987620 00011111111101100
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
...... ..... .+.+.+|+|+++++++.... ....|+++++.+|.
T Consensus 230 ~~~~~~------~~~p~-r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 230 LSHVLT------PFLPD-WVAEPEDIADTVCWLASDES-RKVTAAQIPVDQGS 274 (277)
T ss_dssp GTTTTC------CSSSC-SCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred HHHHhh------hccCC-CCCCHHHHHHHHHHHhCccc-cCCcCCEEeeCCCc
Confidence 000000 11111 37899999999999997622 34678999998774
No 226
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.91 E-value=1.5e-23 Score=183.23 Aligned_cols=211 Identities=18% Similarity=0.121 Sum_probs=154.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+|+||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|++|.+++.++++..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA----GGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 78999999999999999999999999999999876665555555443 457889999999999999887642
Q ss_pred CCcEEEEcccccc-CC----ccccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKA-VG----ESVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 ~~d~vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||... .. ...+.+...+++|+.++.++++++. +.+.++||++||...+. +..
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 174 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN-----------PVA 174 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC-----------CCT
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC-----------CCC
Confidence 6999999999732 11 2334456789999999999988754 34567999999988752 445
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
+...|+.+|.+.+.+++.++.+. .++++.+++||.+..+. ......
T Consensus 175 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~------------------~~~~~~-------------- 222 (262)
T 3rkr_A 175 DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF------------------GVGLSA-------------- 222 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc------------------cccccc--------------
Confidence 56789999999999999887763 47999999999887641 000000
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEE
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYN 264 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~n 264 (347)
......++..+|+|+++.+++..... ...++++.
T Consensus 223 ---~~~~~~~~~p~dvA~~v~~l~s~~~~-~~~g~~~i 256 (262)
T 3rkr_A 223 ---KKSALGAIEPDDIADVVALLATQADQ-SFISEVLV 256 (262)
T ss_dssp ---------CCCHHHHHHHHHHHHTCCTT-CCEEEEEE
T ss_pred ---ccccccCCCHHHHHHHHHHHhcCccc-cccCcEEe
Confidence 01122367899999999999976322 33445443
No 227
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.91 E-value=7.1e-24 Score=186.97 Aligned_cols=174 Identities=18% Similarity=0.173 Sum_probs=134.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||+++++.|+++|++|++++|+....+...+.+.... ....+.++.+|++|.+++.++++..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG--YPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC--CCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999999999997665554444443321 1235778899999999998887632
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhH----HHHHHHHHHHcCC--CeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTG----TITLLEVMAAHGC--KNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~l~~~~~~~~~--~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+|||+||...... ..+.+...+++|+.+ ++.+++.+++.+. ++||++||...+.. .+.
T Consensus 111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~~ 181 (279)
T 1xg5_A 111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPL 181 (279)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CCC
Confidence 6999999999754332 233456788999999 5566667777665 79999999987632 133
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc----CCceEEEeecccccCC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD----SEWKIILLRYFNPVGA 187 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~lR~~~v~G~ 187 (347)
.+...|+.+|.+.+.+++.++.+. .++++++++||.+.++
T Consensus 182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 225 (279)
T 1xg5_A 182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 225 (279)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence 445689999999999998877653 4799999999998875
No 228
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.91 E-value=1.8e-24 Score=190.25 Aligned_cols=228 Identities=12% Similarity=0.020 Sum_probs=166.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|++|.+++.++++..
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS----GGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT----TCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 378999999999999999999999999999999888777666665543 457889999999999888877632
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+++...+++|+.++.++++++. +.+.++||++||...+. +..+
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~ 177 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSV 177 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCC
Confidence 6999999999754332 334456689999999999988763 44567999999988763 3344
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
...|+.||.+.+.+++.++.++ .++++.+++||.+..+... ..................
T Consensus 178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-------~~~~~~~~~~~~~~~~~~------------ 238 (275)
T 4imr_A 178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNA-------DRRAQDPEGWDEYVRTLN------------ 238 (275)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH-------HHHHHCHHHHHHHHHHHS------------
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccc-------cccccChHHHHHHHhhcC------------
Confidence 5679999999999999888775 3799999999998765100 000000001111111000
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
....+...+|+|+++++++.... ....|+++++.+|
T Consensus 239 ----p~~r~~~pedvA~~v~fL~s~~a-~~itG~~i~vdGG 274 (275)
T 4imr_A 239 ----WMGRAGRPEEMVGAALFLASEAC-SFMTGETIFLTGG 274 (275)
T ss_dssp ----TTCSCBCGGGGHHHHHHHHSGGG-TTCCSCEEEESSC
T ss_pred ----ccCCCcCHHHHHHHHHHHcCccc-CCCCCCEEEeCCC
Confidence 01125678999999999987622 3467899999776
No 229
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.91 E-value=4.2e-24 Score=186.16 Aligned_cols=221 Identities=19% Similarity=0.154 Sum_probs=159.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|..... .+. + ..++.++.+|++|.+++.++++..
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~---~----~~~~~~~~~D~~~~~~v~~~~~~~~~~g 78 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VAD---L----GDRARFAAADVTDEAAVASALDLAETMG 78 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHH---T----CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHh---c----CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence 37899999999999999999999999999999854322 111 1 457889999999999998887632
Q ss_pred CCcEEEEccccccCC--------ccccCcchhhhhhhhHHHHHHHHHHHc------------CCCeEEEeccccccCCCC
Q 040584 78 KFDAVIHFAGLKAVG--------ESVQKPLPYFDNNLTGTITLLEVMAAH------------GCKNLVFSSSATAYGWPK 137 (347)
Q Consensus 78 ~~d~vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~------------~~~~iv~~SS~~~yg~~~ 137 (347)
++|+||||||..... .+.+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 155 (257)
T 3tl3_A 79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD--- 155 (257)
T ss_dssp CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C---
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC---
Confidence 699999999964321 234456778999999999999887653 234899999987752
Q ss_pred CCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCC
Q 040584 138 VVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRR 215 (347)
Q Consensus 138 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (347)
+......|+.||.+.+.+++.++.++ .++++.+++||.+..+.. ..+.+..........
T Consensus 156 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~~~~~~~~~~ 216 (257)
T 3tl3_A 156 --------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLL-----------ASLPEEARASLGKQV 216 (257)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC--------------CHHHHHHHHHTS
T ss_pred --------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhh-----------hhccHHHHHHHHhcC
Confidence 22345689999999999999888774 379999999999987621 111122221111110
Q ss_pred CceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 216 PALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 216 ~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
+ . ...+.+.+|+|+++++++.. +...|+++++.+|..++
T Consensus 217 ---~---------~---~~r~~~p~dva~~v~~l~s~---~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 217 ---P---------H---PSRLGNPDEYGALAVHIIEN---PMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp ---S---------S---SCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTC---
T ss_pred ---C---------C---CCCccCHHHHHHHHHHHhcC---CCCCCCEEEECCCccCC
Confidence 0 0 02367899999999999986 46788999998886544
No 230
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.91 E-value=1.9e-23 Score=183.25 Aligned_cols=223 Identities=15% Similarity=0.189 Sum_probs=156.0
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+++||||+|+||++++++|+++|++|++++|+....+...+.+.. ..++.++.+|++|.+++.++++..
T Consensus 20 ~~k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 20 MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-----KTRVLPLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp -CCEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-----TSCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred cCcEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999976554443333321 136888999999999999998753
Q ss_pred --CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHHHH----HcCCC-eEEEeccccccCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCK-NLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 --~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||.... .. ..+.+...+++|+.++.++++++. +.+.+ +||++||...+.
T Consensus 95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~----------- 163 (272)
T 2nwq_A 95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW----------- 163 (272)
T ss_dssp GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS-----------
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc-----------
Confidence 57999999997532 21 234456789999999888766654 45667 999999988752
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+......|+.+|.+.+.+++.++.+. .++++++++||.+.++.... .. .+......
T Consensus 164 ~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~--------------~~----~~~~~~~~---- 221 (272)
T 2nwq_A 164 PYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV--------------RF----GGDQARYD---- 221 (272)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------------------------
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc--------------cc----ccchHHHH----
Confidence 33445789999999999999998775 37999999999988762100 00 00000000
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
.......++..+|+|+++++++.. .....++.+.+.++
T Consensus 222 -----~~~~~~~~~~pedvA~~v~~l~s~--~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 222 -----KTYAGAHPIQPEDIAETIFWIMNQ--PAHLNINSLEIMPV 259 (272)
T ss_dssp ---------CCCCBCHHHHHHHHHHHHTS--CTTEEEEEEEEEET
T ss_pred -----HhhccCCCCCHHHHHHHHHHHhCC--CccCccceEEEeec
Confidence 000001247899999999999975 22345667776554
No 231
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.91 E-value=3.2e-23 Score=186.29 Aligned_cols=175 Identities=17% Similarity=0.159 Sum_probs=134.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC-chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD-NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
|+++||||+|+||++++++|+++|++|+++.|+. .......+.+.......+.++.++.+|++|.+++.++++..
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999988863 22222233333222222457899999999999999888743
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... +.+++...+++|+.|+.++++++ ++.+.++||++||...++. +..
T Consensus 86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~----------~~~ 155 (324)
T 3u9l_A 86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG----------TPP 155 (324)
T ss_dssp SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CCS
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC----------CCC
Confidence 6999999999764433 23345668899999999999987 5566789999999887631 122
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA 187 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 187 (347)
....|+.||.++|.+++.++.+. .++++++++||.+.++
T Consensus 156 ~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 156 YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 34679999999999999988774 4899999999999865
No 232
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.91 E-value=2.5e-23 Score=179.94 Aligned_cols=219 Identities=17% Similarity=0.143 Sum_probs=159.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+.+...+. .++.++.+|++|.+++.++++..
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA---------VGAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---------TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---------cCCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999875443322211 13678899999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...++ ..
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------~~ 143 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG------------NL 143 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC------------CT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC------------CC
Confidence 5899999999754332 23345668899999999998877643 567999999988442 23
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 225 (347)
....|+.+|.+.+.+.+.++.+. .++++++++||.+..+... .+.+ ......... +
T Consensus 144 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----------~~~~~~~~~~~~~~----p------ 202 (245)
T 1uls_A 144 GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-----------KVPEKVREKAIAAT----P------ 202 (245)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-----------SSCHHHHHHHHHTC----T------
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh-----------hcCHHHHHHHHhhC----C------
Confidence 45689999999999998887764 3799999999999876210 1111 122222111 0
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.+ .+++.+|+|+++++++.... ....++.+++.+|..
T Consensus 203 ---~~----~~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 203 ---LG----RAGKPLEVAYAALFLLSDES-SFITGQVLFVDGGRT 239 (245)
T ss_dssp ---TC----SCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTT
T ss_pred ---CC----CCcCHHHHHHHHHHHhCchh-cCCcCCEEEECCCcc
Confidence 11 26789999999999987522 245789999987754
No 233
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.91 E-value=1.7e-23 Score=183.66 Aligned_cols=206 Identities=17% Similarity=0.169 Sum_probs=147.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+ ..++.++.+|++|.+++.++++..
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-------GDDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999765554433332 347889999999999999888643
Q ss_pred -CCcEEEEccccccC-C----ccccCcchhhhhhhhHHHHHHHHHHH----cC--CCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV-G----ESVQKPLPYFDNNLTGTITLLEVMAA----HG--CKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 -~~d~vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||.... . ...+.+...+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------- 169 (272)
T 4dyv_A 101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS----------- 169 (272)
T ss_dssp SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-----------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-----------
Confidence 69999999997533 1 13344567899999999888886553 23 35999999987752
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+..+...|+.||.+.+.+++.++.+. .++++.+++||.+..+-. .....+.....
T Consensus 170 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~------------------~~~~~~~~~~~----- 226 (272)
T 4dyv_A 170 PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMA------------------QKMKAGVPQAD----- 226 (272)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------------
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhh------------------hhhcccchhhh-----
Confidence 34456789999999999999888774 379999999999887521 00000000000
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKL 253 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~ 253 (347)
.......+++++|+|+++++++..+
T Consensus 227 -----~~~~~~~~~~pedvA~~v~fL~s~~ 251 (272)
T 4dyv_A 227 -----LSIKVEPVMDVAHVASAVVYMASLP 251 (272)
T ss_dssp --------------CHHHHHHHHHHHHHSC
T ss_pred -----hcccccCCCCHHHHHHHHHHHhCCC
Confidence 0112234789999999999999973
No 234
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.91 E-value=3.3e-23 Score=184.14 Aligned_cols=229 Identities=13% Similarity=0.056 Sum_probs=166.9
Q ss_pred CceEEEEcCCC--cccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVG--YIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+++||||+| +||++++++|+++|++|++++|+....+...+..... ..+.++.+|++|.+++.++++..
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 37899999998 9999999999999999999999865433332222222 24678999999999999888643
Q ss_pred ---CCcEEEEccccccC--------CccccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAV--------GESVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 ---~~d~vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||.... ..+.+.+...+++|+.++.++++++...- .++||++||...+.
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~---------- 174 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK---------- 174 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----------
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc----------
Confidence 69999999997542 12334566789999999999999987642 34999999988752
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+......|+.||.+.+.+++.++.++ .++++.+++||.+..+... .. .............. +
T Consensus 175 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~-------~~-~~~~~~~~~~~~~~--p----- 238 (296)
T 3k31_A 175 -VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS-------GI-SDFHYILTWNKYNS--P----- 238 (296)
T ss_dssp -CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC-------SC-HHHHHHHHHHHHHS--T-----
T ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh-------cc-cchHHHHHHHHhcC--C-----
Confidence 34456789999999999999888775 4799999999999886311 00 00111122222111 0
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
...+...+|+|+++++++.... ....|+++++.+|..++
T Consensus 239 ----------~~r~~~pedvA~~v~fL~s~~a-~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 239 ----------LRRNTTLDDVGGAALYLLSDLG-RGTTGETVHVDCGYHVV 277 (296)
T ss_dssp ----------TSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGC
T ss_pred ----------CCCCCCHHHHHHHHHHHcCCcc-CCccCCEEEECCCcccc
Confidence 1125678999999999997522 34678999998886543
No 235
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.91 E-value=2.2e-24 Score=186.75 Aligned_cols=216 Identities=18% Similarity=0.161 Sum_probs=155.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+ .+..+.+|++|.+++.++++..
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK---------------GLFGVEVDVTDSDAVDRAFTAVEEHQ 79 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH---------------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999998765432 2224789999999998887642
Q ss_pred -CCcEEEEccccccCC----ccccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVG----ESVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||..... ...+.+...+++|+.++.++++++.. .+.++||++||...+. +..
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 148 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-----------GIG 148 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc-----------CCC
Confidence 589999999975432 23345567899999999999887653 4567999999986642 223
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.+|.+.+.+++.++.+. .++++++++||.+.++.. ..+........... .
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~~~~~~~~---~-------- 206 (247)
T 1uzm_A 149 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT-----------RALDERIQQGALQF---I-------- 206 (247)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----------HHSCHHHHHHHGGG---C--------
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccch-----------hhcCHHHHHHHHhc---C--------
Confidence 45689999999999999887764 379999999999876510 00001111111100 0
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+++.+|+|+++++++.... ....++++++.+|..+
T Consensus 207 -----p~~~~~~~~dvA~~~~~l~s~~~-~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 207 -----PAKRVGTPAEVAGVVSFLASEDA-SYISGAVIPVDGGMGM 245 (247)
T ss_dssp -----TTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTC
T ss_pred -----CCCCCcCHHHHHHHHHHHcCccc-cCCcCCEEEECCCccc
Confidence 01237899999999999987522 2457899999887543
No 236
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.91 E-value=7.3e-24 Score=182.29 Aligned_cols=208 Identities=14% Similarity=0.163 Sum_probs=156.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc-----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----- 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 76 (347)
+|+++||||+|+||++++++|+++|++|++++|+..... ....++.+|++|.+++.++++.
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 68 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------------DSNILVDGNKNWTEQEQSILEQTASSL 68 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999866432 1346778999999998887762
Q ss_pred --CCCcEEEEccccccCCc-----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 77 --TKFDAVIHFAGLKAVGE-----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 77 --~~~d~vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
.++|+||||||...... ..+.+...+++|+.++.++++++... ..++||++||...+. +.
T Consensus 69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 137 (236)
T 1ooe_A 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PT 137 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CC
T ss_pred CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-----------CC
Confidence 26999999999654221 23445678899999999999988764 235999999988762 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc----CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
.+...|+.+|.+.+.+++.++.+. .++++++++||.+.++ +..... ...
T Consensus 138 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~------------------~~~~~~-~~~-------- 190 (236)
T 1ooe_A 138 PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP------------------MNRKWM-PNA-------- 190 (236)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH------------------HHHHHS-TTC--------
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc------------------chhhcC-CCc--------
Confidence 456789999999999999998875 2599999999998875 111111 110
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
....++..+|+|+++..++.........|+.+++.++.
T Consensus 191 --------~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 191 --------DHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp --------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred --------cccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 11135678999999986664322334568888887664
No 237
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.91 E-value=1.7e-23 Score=183.60 Aligned_cols=237 Identities=19% Similarity=0.141 Sum_probs=165.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch-hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA-SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|++|+++.++... .+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL----GSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999987765433 33334444332 457889999999999999888643
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... +.+++...+++|+.++.++++++...- -++||++||..... .+..+
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~ 163 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FSVPK 163 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CCCTT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CCCCC
Confidence 6999999999765433 344566789999999999999888753 34999999976321 23445
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCC-CCccHHHHHHHHcCCCCceEEecccCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGI-PNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
...|+.||.+.+.+.+.++.++ .++++.+++||.+..+............ ...............
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 231 (270)
T 3is3_A 164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA------------ 231 (270)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH------------
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc------------
Confidence 6789999999999999888874 4799999999999876210000000000 000011111111110
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.....+.+.+|+|+++.+++.... ....|+++++.+|.
T Consensus 232 ----~p~~r~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG~ 269 (270)
T 3is3_A 232 ----SPLHRNGWPQDVANVVGFLVSKEG-EWVNGKVLTLDGGA 269 (270)
T ss_dssp ----STTCSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTC
T ss_pred ----CCCCCCCCHHHHHHHHHHHcCCcc-CCccCcEEEeCCCC
Confidence 111236789999999999986522 34678999998774
No 238
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.91 E-value=2.4e-23 Score=186.79 Aligned_cols=242 Identities=14% Similarity=0.126 Sum_probs=164.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch--------hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA--------SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV 73 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (347)
+|+++||||+|+||+++++.|+++|++|++++|.... .....+.........+.++.++.+|++|.+++.++
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV 125 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 3789999999999999999999999999999876321 11111222111112356788999999999999988
Q ss_pred HccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cC-CCeEEEeccccccCCCCCC
Q 040584 74 FAGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HG-CKNLVFSSSATAYGWPKVV 139 (347)
Q Consensus 74 ~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~~yg~~~~~ 139 (347)
++.. ++|+||||||...... +.+.+...+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 126 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~----- 200 (317)
T 3oec_A 126 VDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR----- 200 (317)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS-----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC-----
Confidence 8643 6999999999765432 3345567889999999999887643 33 45899999988762
Q ss_pred CCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCC---CCCCCCCCccHHHHHHHHcCC
Q 040584 140 PCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKG---EDPRGIPNNLMPFVTQVAVGR 214 (347)
Q Consensus 140 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 214 (347)
+......|+.||.+.+.+++.++.++ .++++.+++||.+.++...... .....................
T Consensus 201 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (317)
T 3oec_A 201 ------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQL 274 (317)
T ss_dssp ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTT
T ss_pred ------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhh
Confidence 33455789999999999999988875 3799999999999875200000 000000000000001110000
Q ss_pred CCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 215 RPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 215 ~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
......+++++|+|+++.+++... .....|+++++.+|..
T Consensus 275 ---------------~~~p~~~~~pedvA~av~fL~s~~-a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 275 ---------------TLLPIPWVEPEDVSNAVAWLASDE-ARYIHGAAIPVDGGQL 314 (317)
T ss_dssp ---------------CSSSSSSBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTGG
T ss_pred ---------------ccCCCCCCCHHHHHHHHHHHcCCc-ccCCCCCEEEECcchh
Confidence 011145789999999999988652 2346789999988754
No 239
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.91 E-value=5.4e-24 Score=186.23 Aligned_cols=206 Identities=17% Similarity=0.210 Sum_probs=151.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+|+++||||+|+||++++++|+++|++|++++|+....+ .. ...++.++.+|++|.+++.++++..
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK-------AL---NLPNTLCAQVDVTDKYTFDTAITRAEKI 84 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH-------TT---CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-------Hh---hcCCceEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999998744322 11 1347788999999999999887642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||...... ..+.+...+++|+.++.++++++ ++.+.++||++||...+. +.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~ 153 (266)
T 3p19_A 85 YGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK-----------TF 153 (266)
T ss_dssp HCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CC
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC-----------CC
Confidence 6999999999765433 23345567899999999977665 455677999999988762 34
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.....|+.||.+.+.+.+.++.++ .++++.+++||.+.++.... ... ...........
T Consensus 154 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------~~~--~~~~~~~~~~~----------- 213 (266)
T 3p19_A 154 PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSH-------TTS--QQIKDGYDAWR----------- 213 (266)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG-------CSC--HHHHHHHHHHH-----------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhc-------ccc--hhhhHHHHhhc-----------
Confidence 456789999999999999888774 37999999999998863110 000 00111111000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
.....+++++|+|+++++++..
T Consensus 214 -----~~~~r~~~pedvA~av~~l~~~ 235 (266)
T 3p19_A 214 -----VDMGGVLAADDVARAVLFAYQQ 235 (266)
T ss_dssp -----HHTTCCBCHHHHHHHHHHHHHS
T ss_pred -----ccccCCCCHHHHHHHHHHHHcC
Confidence 0112367899999999999987
No 240
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.91 E-value=1.1e-24 Score=189.84 Aligned_cols=225 Identities=14% Similarity=0.013 Sum_probs=153.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--CC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--KF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~ 79 (347)
||+|+||||+|+||++++++|+++|++|++++|+...... . +.+|++|.+++.+++++. ++
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------------~-~~~Dl~~~~~v~~~~~~~~~~i 63 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------------D-LSTAEGRKQAIADVLAKCSKGM 63 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------C-TTSHHHHHHHHHHHHTTCTTCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------------c-cccCCCCHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999999987654320 1 568999999999998754 57
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCC-----------
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEE----------- 144 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~----------- 144 (347)
|+||||||.... ...++..+++|+.++.++++++.. .+.++||++||...+......+..+.
T Consensus 64 d~lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 1fjh_A 64 DGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp SEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred CEEEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhh
Confidence 999999997541 234678999999999999888763 45579999999988732111111000
Q ss_pred ------CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC
Q 040584 145 ------FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216 (347)
Q Consensus 145 ------~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
.+..+...|+.||.+.+.+++.++.+. .++++++++||.+.++..... ... .........
T Consensus 141 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~---~~~~~~~~~--- 208 (257)
T 1fjh_A 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG------LQD---PRYGESIAK--- 208 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------------
T ss_pred hhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh------ccc---hhHHHHHHh---
Confidence 122345689999999999998887763 489999999999987621000 000 000000000
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
+ ......+++++|+|+++++++.... ....|+.|++.+|...
T Consensus 209 -~-----------~~~~~~~~~~~dvA~~~~~l~~~~~-~~~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 209 -F-----------VPPMGRRAEPSEMASVIAFLMSPAA-SYVHGAQIVIDGGIDA 250 (257)
T ss_dssp -C-----------CCSTTSCCCTHHHHHHHHHHTSGGG-TTCCSCEEEESTTHHH
T ss_pred -c-----------ccccCCCCCHHHHHHHHHHHhCchh-cCCcCCEEEECCCccc
Confidence 0 0011236899999999999987622 2456889999877543
No 241
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.91 E-value=3e-24 Score=188.41 Aligned_cols=232 Identities=14% Similarity=0.076 Sum_probs=162.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+. -.++.++.+|++|.+++.++++..
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE--------LPGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------hcCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999875544332222 124788999999999999887642
Q ss_pred -CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||.... .. ..+.+...+++|+.++.++++++... +.++||++||...+. +..
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 149 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI-----------GQA 149 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH-----------CCT
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC-----------CCC
Confidence 69999999997532 11 22345678899999999998887531 246999999976541 223
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYS 226 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (347)
....|+.+|.+.+.+++.++.+. .++++++++||.+++|..... ... .......+.......
T Consensus 150 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~---~~~-~~~~~~~~~~~~~~~------------ 213 (270)
T 1yde_A 150 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL---AAL-MPDPRASIREGMLAQ------------ 213 (270)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH---HTT-SSSHHHHHHHHHHTS------------
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhh---hhc-ccchHHHHHHHhhcC------------
Confidence 45689999999999999887663 389999999999998620000 000 000000111111100
Q ss_pred CCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHH
Q 040584 227 TKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLE 275 (347)
Q Consensus 227 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e 275 (347)
....+...+|+|+++.+++.. .....|+++++.+|..+...+
T Consensus 214 -----p~~r~~~p~dva~~v~~L~s~--~~~itG~~i~vdGG~~~~~~~ 255 (270)
T 1yde_A 214 -----PLGRMGQPAEVGAAAVFLASE--ANFCTGIELLVTGGAELGYGC 255 (270)
T ss_dssp -----TTSSCBCHHHHHHHHHHHHHH--CTTCCSCEEEESTTTTSCC--
T ss_pred -----CCCCCcCHHHHHHHHHHHccc--CCCcCCCEEEECCCeecccCc
Confidence 011257899999999999876 234678999998887665443
No 242
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.91 E-value=2.5e-23 Score=183.05 Aligned_cols=226 Identities=15% Similarity=0.118 Sum_probs=163.0
Q ss_pred ceEEEEcCC--CcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 3 KNILVIGGV--GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 3 ~~vlItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+++||||+ |+||++++++|+++|++|++++|+.. .....+.+.... ..+.++.+|++|.+++.++++..
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL----NSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT----TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc----CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 789999999 99999999999999999999999875 333333333321 24678999999999998887642
Q ss_pred --CCcEEEEccccccC--------CccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAV--------GESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 --~~d~vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||.... ..+.+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------- 150 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK----------- 150 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-----------
Confidence 68999999997542 1233455678999999999999998765 125999999987652
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+..+...|+.||.+.+.+++.++.+. .++++++++||.+.++... .. .........+.... ++
T Consensus 151 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------~~-~~~~~~~~~~~~~~--p~----- 215 (275)
T 2pd4_A 151 YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS-------GI-ADFRMILKWNEINA--PL----- 215 (275)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG-------GS-TTHHHHHHHHHHHS--TT-----
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhh-------hc-cccHHHHHHHHhcC--Cc-----
Confidence 23445689999999999999887774 3799999999999886311 00 00111222222111 00
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
..+.+.+|+|+++++++.... ....++.+++.++..
T Consensus 216 ----------~~~~~p~dva~~~~~l~s~~~-~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 216 ----------RKNVSLEEVGNAGMYLLSSLS-SGVSGEVHFVDAGYH 251 (275)
T ss_dssp ----------SSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred ----------CCCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCCcc
Confidence 125679999999999986522 245778999977753
No 243
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.91 E-value=4.1e-23 Score=180.72 Aligned_cols=224 Identities=17% Similarity=0.114 Sum_probs=160.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC-CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN-LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
|+++||||+|+||++++++|+++|++|++..+ .....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA----GGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 68999999999999999999999999998754 433444444444332 457889999999999999887643
Q ss_pred -CCcEEEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQAM 150 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~ 150 (347)
++|+||||||....... .+.++..+++|+.++.++++++... ..++||++||...+. +....
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~ 172 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL-----------LHPSY 172 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH-----------CCTTC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc-----------CCCCc
Confidence 69999999997654332 2334567889999999999887754 234899999987752 33445
Q ss_pred CchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCC
Q 040584 151 NPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 151 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
..|+.||.+.+.+++.++.++ .++++.++.||.+..+.... ..... ........
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------~~~~~---~~~~~~~~--------------- 228 (267)
T 3u5t_A 173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE------GKSDE---VRDRFAKL--------------- 228 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------------CHHHHHTS---------------
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc------cCCHH---HHHHHHhc---------------
Confidence 689999999999999998886 37999999999988752100 00000 11111111
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
.....+...+|+|+++.+++... .....|+++++.+|
T Consensus 229 --~p~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG 265 (267)
T 3u5t_A 229 --APLERLGTPQDIAGAVAFLAGPD-GAWVNGQVLRANGG 265 (267)
T ss_dssp --STTCSCBCHHHHHHHHHHHHSTT-TTTCCSEEEEESSS
T ss_pred --CCCCCCcCHHHHHHHHHHHhCcc-ccCccCCEEEeCCC
Confidence 11123678999999999988752 23467899999776
No 244
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.91 E-value=6.4e-23 Score=181.97 Aligned_cols=229 Identities=14% Similarity=0.080 Sum_probs=164.5
Q ss_pred CceEEEEcCCCc--ccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGY--IGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+++||||+|+ ||++++++|+++|++|++++|+....+. .+.+.... .++.++.+|++|.+++.++++..
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEEL----GAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHH----TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhc----CCceEEECCCCCHHHHHHHHHHHHH
Confidence 378999999988 9999999999999999999987432222 22222221 36788999999999999888642
Q ss_pred ---CCcEEEEccccccC--------CccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAV--------GESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 ---~~d~vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||.... ....+.+...+++|+.++.++++++... ..++||++||...+.
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~---------- 175 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK---------- 175 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS----------
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc----------
Confidence 69999999997541 1233455678999999999999988764 235999999988763
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+......|+.||.+.+.+++.++.++ .++++.+++||.+..+..... ..............
T Consensus 176 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~-------- 238 (293)
T 3grk_A 176 -VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI--------GDFRYILKWNEYNA-------- 238 (293)
T ss_dssp -BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------CCHHHHHHHHHHHS--------
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc--------cchHHHHHHHHhcC--------
Confidence 34456789999999999999888774 379999999999987631100 00111222222111
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
....+...+|+|+++++++.... ....|+++++.+|..++
T Consensus 239 ---------p~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~~~ 278 (293)
T 3grk_A 239 ---------PLRRTVTIDEVGDVGLYFLSDLS-RSVTGEVHHADSGYHVI 278 (293)
T ss_dssp ---------TTSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGB
T ss_pred ---------CCCCCCCHHHHHHHHHHHcCccc-cCCcceEEEECCCcccC
Confidence 01125679999999999987522 34678999998886543
No 245
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.91 E-value=1.9e-23 Score=181.06 Aligned_cols=212 Identities=14% Similarity=0.067 Sum_probs=151.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+|+||||+|+||++++++|+++| ++|++++|+....+.. ..+ ...++.++.+|++|.+++.++++..
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l----~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSI---KDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTC---CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH----Hhc---cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999 9999999987655432 221 2457889999999999998888632
Q ss_pred -----CCcEEEEcccccc-CCc----cccCcchhhhhhhhHHHHHHHHHHHc----------C-----CCeEEEeccccc
Q 040584 78 -----KFDAVIHFAGLKA-VGE----SVQKPLPYFDNNLTGTITLLEVMAAH----------G-----CKNLVFSSSATA 132 (347)
Q Consensus 78 -----~~d~vih~a~~~~-~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-----~~~iv~~SS~~~ 132 (347)
++|+||||||... ... ..+.+...+++|+.++.++++++... + .++||++||...
T Consensus 76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 5999999999764 221 23345668899999999998876542 4 679999999877
Q ss_pred cCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHH
Q 040584 133 YGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQV 210 (347)
Q Consensus 133 yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 210 (347)
+..... +..+..+...|+.+|.+++.+++.++.++ .++++++++||.+.++. ..
T Consensus 156 ~~~~~~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~------------------~~-- 211 (250)
T 1yo6_A 156 SITDNT----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL------------------GG-- 211 (250)
T ss_dssp CSTTCC----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------
T ss_pred ccCCcc----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC------------------CC--
Confidence 632211 11222456789999999999999888775 37999999999887651 00
Q ss_pred HcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccC
Q 040584 211 AVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGT 267 (347)
Q Consensus 211 ~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~ 267 (347)
. ..+++.+|+|++++.++.... ....++.+.+.+
T Consensus 212 ---~-------------------~~~~~~~~~a~~~~~~~~~~~-~~~~G~~~~~~g 245 (250)
T 1yo6_A 212 ---K-------------------NAALTVEQSTAELISSFNKLD-NSHNGRFFMRNL 245 (250)
T ss_dssp -----------------------------HHHHHHHHHHHTTCC-GGGTTCEEETTE
T ss_pred ---C-------------------CCCCCHHHHHHHHHHHHhccc-ccCCCeEEEECC
Confidence 0 024678999999999998622 123556666543
No 246
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.91 E-value=1.1e-23 Score=182.60 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=151.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+..... ...++.++.+|++|.+++.++++..
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK-HVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT-TSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc-ccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999999987766665555544321 1257889999999999998887642
Q ss_pred -CCcEEEEccccccCCc---cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE---SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..+
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 154 (250)
T 3nyw_A 86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-----------GFAD 154 (250)
T ss_dssp CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CC
T ss_pred CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC-----------CCCC
Confidence 6999999999754322 234456789999999999988763 44567999999987652 2334
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
...|+.||.+.+.+.+.++.++ .++++.+++||.+..+ +.... .. ..
T Consensus 155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~------------------~~~~~--~~--~~--------- 203 (250)
T 3nyw_A 155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD------------------MAKKA--GT--PF--------- 203 (250)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH------------------HHHHT--TC--CS---------
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc------------------hhhhc--CC--Cc---------
Confidence 6789999999999999888774 3799999999987754 12211 11 01
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
....+++.+|+|+++.+++..
T Consensus 204 ----~~~~~~~p~dva~~v~~l~s~ 224 (250)
T 3nyw_A 204 ----KDEEMIQPDDLLNTIRCLLNL 224 (250)
T ss_dssp ----CGGGSBCHHHHHHHHHHHHTS
T ss_pred ----ccccCCCHHHHHHHHHHHHcC
Confidence 112368899999999999986
No 247
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.91 E-value=2e-23 Score=182.37 Aligned_cols=224 Identities=20% Similarity=0.174 Sum_probs=163.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+. + ..++.++.+|++|.+++.+++++.
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---L----EAEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---C----CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h----cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999875543332221 1 246788999999999998887642
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEEFPLQAM 150 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~ 150 (347)
++|+||||||...... ..+.++..+++|+.++.++++++...- .++||++||...++ ....
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------~~~~ 146 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG------------AFGL 146 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC------------HHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC------------CCCc
Confidence 5899999999764332 223445688999999999999887642 35999999988762 1234
Q ss_pred CchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCC
Q 040584 151 NPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 151 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
..|+.||.+.+.+.+.++.+. .++++++++||.+.++... .. ............ +
T Consensus 147 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------~~---~~~~~~~~~~~~--p----------- 203 (263)
T 2a4k_A 147 AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA-------GL---PPWAWEQEVGAS--P----------- 203 (263)
T ss_dssp HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT-------TS---CHHHHHHHHHTS--T-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhh-------hc---CHHHHHHHHhcC--C-----------
Confidence 679999999999998887764 3799999999999886311 00 011122222211 0
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
...+.+.+|+|+++++++.... ....++.+++.+|..+.
T Consensus 204 ----~~~~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdgG~~~~ 242 (263)
T 2a4k_A 204 ----LGRAGRPEEVAQAALFLLSEES-AYITGQALYVDGGRSIV 242 (263)
T ss_dssp ----TCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTTC
T ss_pred ----CCCCcCHHHHHHHHHHHhCccc-cCCcCCEEEECCCcccc
Confidence 1136789999999999987522 24578999998876543
No 248
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.91 E-value=7.9e-24 Score=184.85 Aligned_cols=231 Identities=14% Similarity=0.074 Sum_probs=159.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|+++.|.....+...+....+. ..+.++.++.+|++|.+++.++++..
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 90 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE-DQGAKVALYQSDLSNEEEVAKLFDFAEKEFG 90 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHH-TTTCEEEEEECCCCSHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 789999999999999999999999999999876544333222222221 12457889999999999999888642
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMN 151 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~ 151 (347)
++|+||||||...... +.+.+...+++|+.++.++++++... +.++||++||...+. +.....
T Consensus 91 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~-----------~~~~~~ 159 (262)
T 3ksu_A 91 KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA-----------YTGFYS 159 (262)
T ss_dssp SEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH-----------HHCCCC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc-----------CCCCCc
Confidence 6999999999765433 23345668889999999999998764 345899999987763 223456
Q ss_pred chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 152 PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
.|+.||.+.+.+.+.++.++ .++++.++.||.+..+. ..... .......+. .
T Consensus 160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~------------------~~~~~--~~~~~~~~~------~ 213 (262)
T 3ksu_A 160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF------------------FYGQE--TKESTAFHK------S 213 (262)
T ss_dssp C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH------------------HHTCC------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc------------------ccccC--chHHHHHHH------h
Confidence 89999999999999998885 47999999999876541 00000 000000000 1
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccH
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSV 273 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~ 273 (347)
......+...+|+|+++++++.. .....|+.+++.+|.....
T Consensus 214 ~~~~~r~~~pedvA~~v~~L~s~--~~~itG~~i~vdGg~~~~~ 255 (262)
T 3ksu_A 214 QAMGNQLTKIEDIAPIIKFLTTD--GWWINGQTIFANGGYTTRE 255 (262)
T ss_dssp --CCCCSCCGGGTHHHHHHHHTT--TTTCCSCEEEESTTCCCC-
T ss_pred cCcccCCCCHHHHHHHHHHHcCC--CCCccCCEEEECCCccCCC
Confidence 11223467899999999999875 2356789999987764443
No 249
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.91 E-value=1.8e-23 Score=180.82 Aligned_cols=223 Identities=18% Similarity=0.160 Sum_probs=161.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHh-CCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLL-GGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|++ .|+.|++++|..... ...+.++.+|++|.+++.++++..
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 69 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------------AENLKFIKADLTKQQDITNVLDIIKNV 69 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------------CTTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------------cccceEEecCcCCHHHHHHHHHHHHhC
Confidence 57899999999999999999999 789999998876522 236788999999999999888533
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEEFPLQAMN 151 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~ 151 (347)
++|+||||||...... +.+.+...+++|+.++.++++++...- -++||++||...+. +.....
T Consensus 70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~ 138 (244)
T 4e4y_A 70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI-----------AKPNSF 138 (244)
T ss_dssp CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC-----------CCTTBH
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc-----------CCCCCc
Confidence 6999999999754322 334556789999999999999887642 24899999988762 334556
Q ss_pred chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHH--cCCC--CceEEecccC
Q 040584 152 PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVA--VGRR--PALTVFGTDY 225 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~g~~~ 225 (347)
.|+.||.+.+.+.+.++.+. .++++.+++||.+.+|. ......... .+.. .......
T Consensus 139 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~--------------~~~~~~~~~~~~~~~~~~~~~~~~--- 201 (244)
T 4e4y_A 139 AYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL--------------YRNLIQKYANNVGISFDEAQKQEE--- 201 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH--------------HHHHHHHHHHHHTCCHHHHHHHHH---
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh--------------hHHHHHhhhhhcCCCHHHHHHHHh---
Confidence 89999999999999888764 37999999999998751 111111100 0000 0000000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.......+.+++|+|+++++++.... ....|+++++.+|..
T Consensus 202 ---~~~p~~r~~~p~dvA~~v~~l~s~~~-~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 202 ---KEFPLNRIAQPQEIAELVIFLLSDKS-KFMTGGLIPIDGGYT 242 (244)
T ss_dssp ---TTSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred ---hcCCCCCCcCHHHHHHHHHHHhcCcc-ccccCCeEeECCCcc
Confidence 11122347889999999999997522 346789999987753
No 250
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.91 E-value=2.5e-23 Score=183.68 Aligned_cols=223 Identities=16% Similarity=0.158 Sum_probs=164.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----C
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----K 78 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~ 78 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++.++.+|++|.+++.++++.. +
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-------GNRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 68999999999999999999999999999999866554444333 357889999999999999887632 5
Q ss_pred CcEEEEc-cccccCCc---------cccCcchhhhhhhhHHHHHHHHHHHc----------CCCeEEEeccccccCCCCC
Q 040584 79 FDAVIHF-AGLKAVGE---------SVQKPLPYFDNNLTGTITLLEVMAAH----------GCKNLVFSSSATAYGWPKV 138 (347)
Q Consensus 79 ~d~vih~-a~~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~yg~~~~ 138 (347)
+|+|||+ |+...... ..+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---- 179 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE---- 179 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS----
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC----
Confidence 8999999 54432221 12235678899999999998876532 235899999998762
Q ss_pred CCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC
Q 040584 139 VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216 (347)
Q Consensus 139 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
+......|+.||.+.+.+++.++.++ .++++.+++||.+..+... ..............
T Consensus 180 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----------~~~~~~~~~~~~~~-- 240 (281)
T 3ppi_A 180 -------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME----------SVGEEALAKFAANI-- 240 (281)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----------TTCHHHHHHHHHTC--
T ss_pred -------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh----------cccHHHHHHHHhcC--
Confidence 34456789999999999998887775 3799999999998764100 00111222222211
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCccc
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTS 272 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s 272 (347)
+ ....+++.+|+|+++++++.. ....|+++++.+|..++
T Consensus 241 --~------------~~~~~~~pedvA~~v~~l~s~---~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 241 --P------------FPKRLGTPDEFADAAAFLLTN---GYINGEVMRLDGAQRFT 279 (281)
T ss_dssp --C------------SSSSCBCHHHHHHHHHHHHHC---SSCCSCEEEESTTCCCC
T ss_pred --C------------CCCCCCCHHHHHHHHHHHHcC---CCcCCcEEEECCCcccC
Confidence 0 002478999999999999986 45688999999887654
No 251
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.91 E-value=4.8e-23 Score=185.55 Aligned_cols=226 Identities=13% Similarity=0.038 Sum_probs=165.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEe-CCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH-------------
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVD-NLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA------------- 68 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~------------- 68 (347)
|+++||||+|+||++++++|+++|++|++++ |+........+.+... .+.++.++.+|++|.+
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR---RPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---STTCEEEEECCCSSSCBCC-------CCB
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh---cCCeEEEEEeeCCCchhcccccccccccc
Confidence 7899999999999999999999999999998 8765555444444311 2357889999999998
Q ss_pred ----HHHHHHccC-----CCcEEEEccccccCCcc------------------ccCcchhhhhhhhHHHHHHHHHHH---
Q 040584 69 ----ALEVVFAGT-----KFDAVIHFAGLKAVGES------------------VQKPLPYFDNNLTGTITLLEVMAA--- 118 (347)
Q Consensus 69 ----~~~~~~~~~-----~~d~vih~a~~~~~~~~------------------~~~~~~~~~~nv~~~~~l~~~~~~--- 118 (347)
++.++++.. ++|+||||||....... .+.+...+++|+.++.++++++..
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877642 69999999997543221 233456789999999999887653
Q ss_pred -cC------CCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCC
Q 040584 119 -HG------CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHP 189 (347)
Q Consensus 119 -~~------~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~ 189 (347)
.+ .++||++||...+. +......|+.+|.+++.+++.++.++ .++.+++++||.+..+.
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~- 271 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD- 271 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-
T ss_pred hcCCcCCCCCcEEEEECchhhcc-----------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-
Confidence 34 56999999987752 33456789999999999999888774 37999999999998762
Q ss_pred CCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 190 SGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
..+........... + -+ ..+...+|+|+++++++... .....|+++++.+|.
T Consensus 272 -----------~~~~~~~~~~~~~~----p---------~~---~r~~~pedvA~~v~~l~s~~-~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 272 -----------DMPPAVWEGHRSKV----P---------LY---QRDSSAAEVSDVVIFLCSSK-AKYITGTCVKVDGGY 323 (328)
T ss_dssp -----------CSCHHHHHHHHTTC----T---------TT---TSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred -----------cccHHHHHHHHhhC----C---------CC---CCCCCHHHHHHHHHHHhCcc-ccCccCcEEEECCCc
Confidence 01112222222211 0 01 02568999999999998652 234678999998775
Q ss_pred cc
Q 040584 270 GT 271 (347)
Q Consensus 270 ~~ 271 (347)
.+
T Consensus 324 ~~ 325 (328)
T 2qhx_A 324 SL 325 (328)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 252
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.91 E-value=4.4e-23 Score=180.63 Aligned_cols=229 Identities=11% Similarity=0.087 Sum_probs=165.3
Q ss_pred ceEEEEcCCCc--ccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 3 KNILVIGGVGY--IGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 3 ~~vlItGatG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+++||||+|+ ||++++++|+++|++|++++|+....+.. +.+.... ...++.++.+|++|.+++.++++..
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTL--DRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTS--SSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhc--CCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 68999999988 99999999999999999999875443332 2222211 1237889999999999999887643
Q ss_pred --CCcEEEEccccccC----C----ccccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAV----G----ESVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 --~~d~vih~a~~~~~----~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+|||+||.... . ...+.+...+++|+.++.++++++...- -++||++||...+.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------- 153 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL----------- 153 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-----------
Confidence 68999999997541 1 1233455688999999999999987652 34899999988762
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+......|+.||.+.+.+++.++.+. .++++.+++||.+..+..... ..............
T Consensus 154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~--------- 216 (266)
T 3oig_A 154 VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI--------SDFNSILKDIEERA--------- 216 (266)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC--------TTHHHHHHHHHHHS---------
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc--------cchHHHHHHHHhcC---------
Confidence 34456789999999999999888775 379999999999987531110 01112222222211
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+.+.+|+|+++++++.... ....|+++++.+|...
T Consensus 217 --------~~~~~~~p~dva~~v~~l~s~~~-~~~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 217 --------PLRRTTTPEEVGDTAAFLFSDMS-RGITGENLHVDSGFHI 255 (266)
T ss_dssp --------TTSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred --------CCCCCCCHHHHHHHHHHHcCCch-hcCcCCEEEECCCeEE
Confidence 01135789999999999997622 3467899999887543
No 253
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.91 E-value=8.9e-23 Score=178.76 Aligned_cols=229 Identities=14% Similarity=0.022 Sum_probs=166.9
Q ss_pred CceEEEEcCC--CcccHHHHHHHHhCCCeEEEEeCCCchh-HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-
Q 040584 2 AKNILVIGGV--GYIGSHTVLQLLLGGYKTVVVDNLDNAS-EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT- 77 (347)
Q Consensus 2 ~~~vlItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (347)
+|+++||||+ |+||++++++|+++|+.|+++.|+.... ....+.+... .+.++.++.+|++|.+++.++++..
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT---YGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH---HCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh---cCCceeEEecCCCCHHHHHHHHHHHH
Confidence 4789999999 9999999999999999999998876654 3444444332 2457889999999999999887643
Q ss_pred ----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 ----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 ----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||...+...
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 167 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN--------- 167 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------
Confidence 6899999999765432 33445678999999999998876 44556799999998765211
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhcC-CceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSDS-EWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
+..+...|+.||.+.+.+++.++.++. .+.+.++.||.+..+- ...+.+.........
T Consensus 168 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~-----------~~~~~~~~~~~~~~~---------- 226 (267)
T 3gdg_A 168 FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGL-----------SDFVPKETQQLWHSM---------- 226 (267)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSC-----------GGGSCHHHHHHHHTT----------
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccch-----------hhhCCHHHHHHHHhc----------
Confidence 113457899999999999999988863 3788999999887642 111222222222211
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.....+.+.+|+|+++.+++.. ......|+++++.+|..
T Consensus 227 ------~~~~r~~~~~dva~~~~~l~s~-~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 227 ------IPMGRDGLAKELKGAYVYFASD-ASTYTTGADLLIDGGYT 265 (267)
T ss_dssp ------STTSSCEETHHHHHHHHHHHST-TCTTCCSCEEEESTTGG
T ss_pred ------CCCCCCcCHHHHHhHhheeecC-ccccccCCEEEECCcee
Confidence 1122467899999999998875 22346789999987754
No 254
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.90 E-value=8.1e-23 Score=175.96 Aligned_cols=230 Identities=16% Similarity=0.084 Sum_probs=168.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||++.||+++++.|+++|+.|++++|+.+..+...+++... +.++.++.+|++|++++++++++.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~----g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM----GKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 489999999999999999999999999999999877777666666554 457889999999999999887642
Q ss_pred -CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|++|||||.... .+ +.++++..+++|+.++..+.+++. +.+-++||++||...+- +.
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~-----------~~ 151 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR-----------GG 151 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------SS
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC-----------CC
Confidence 79999999996432 22 345667799999999998877644 44567999999987641 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
....+|+.||.+...+.+.++.++ .++++.++-||.+-.|-...... . -........... .++
T Consensus 152 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-----~--~~~~~~~~~~~~-~~~------- 216 (254)
T 4fn4_A 152 FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSK-----P--SELGMRTLTKLM-SLS------- 216 (254)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSS-----C--CHHHHHHHHHHH-TTC-------
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccC-----C--cHHHHHHHHhcC-CCC-------
Confidence 445689999999999999888875 47999999999887652111100 0 011111111110 011
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
+ -+...+|+|+++++++... .....|+++.+.+|.+
T Consensus 217 ----~----R~g~pediA~~v~fLaSd~-a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 217 ----S----RLAEPEDIANVIVFLASDE-ASFVNGDAVVVDGGLT 252 (254)
T ss_dssp ----C----CCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred ----C----CCcCHHHHHHHHHHHhCch-hcCCcCCEEEeCCCcc
Confidence 1 1456899999999998752 2356889999987743
No 255
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.90 E-value=3.4e-23 Score=180.94 Aligned_cols=171 Identities=22% Similarity=0.186 Sum_probs=133.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK----GVEARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 378999999999999999999999999999998765554444444322 346888999999999988877632
Q ss_pred -CCcEEEEccccc-cCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLK-AVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~-~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||.. .... ..+.+...+++|+.++.++++++.. .+.++||++||...+. +.
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 151 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK-----------GP 151 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS-----------CC
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------CC
Confidence 699999999975 2222 2334567889999999999887654 3567999999987763 22
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA 187 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 187 (347)
.....|+.+|.+.+.+.+.++.+. .++++++++||.+..+
T Consensus 152 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 152 PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 345689999999999998887664 3799999999987754
No 256
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.90 E-value=4.2e-23 Score=182.07 Aligned_cols=227 Identities=14% Similarity=0.066 Sum_probs=165.4
Q ss_pred CceEEEEcCCCc--ccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGY--IGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+|+||||+|+ ||+++++.|+++|++|++++|+. .....+.+... ..++.++.+|++|.+++.++++..
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE----FNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG----GCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh----cCCceEEEeecCCHHHHHHHHHHHHH
Confidence 379999999977 99999999999999999999886 22233333322 235789999999999999887643
Q ss_pred ---CCcEEEEccccccCC---------ccccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAVG---------ESVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCT 142 (347)
Q Consensus 78 ---~~d~vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~ 142 (347)
++|+||||||..... ...+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~-------- 171 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK-------- 171 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS--------
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc--------
Confidence 689999999975431 233445668999999999999987753 346999999988762
Q ss_pred CCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEE
Q 040584 143 EEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTV 220 (347)
Q Consensus 143 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
+......|+.||.+.+.+++.++.+. .++++.+++||.+..+..... ..............
T Consensus 172 ---~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~------ 234 (280)
T 3nrc_A 172 ---AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI--------SNFKKMLDYNAMVS------ 234 (280)
T ss_dssp ---CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC--------TTHHHHHHHHHHHS------
T ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC--------cchHHHHHHHHhcC------
Confidence 34456789999999999999887764 379999999999987631100 01112222222211
Q ss_pred ecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 221 FGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 221 ~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
....+...+|+|+++++++.... ....|+++++.+|..+
T Consensus 235 -----------p~~~~~~pedvA~~v~~l~s~~~-~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 235 -----------PLKKNVDIMEVGNTVAFLCSDMA-TGITGEVVHVDAGYHC 273 (280)
T ss_dssp -----------TTCSCCCHHHHHHHHHHTTSGGG-TTCCSCEEEESTTGGG
T ss_pred -----------CCCCCCCHHHHHHHHHHHhCccc-CCcCCcEEEECCCccc
Confidence 01125789999999999887522 3467899999887643
No 257
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.90 E-value=1.1e-23 Score=182.52 Aligned_cols=214 Identities=14% Similarity=0.122 Sum_probs=151.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 80 (347)
+|+|+||||+|+||++++++|+++|++|++++|+... +..+ ..+.++ +|+ .+++.++++.. ++|
T Consensus 19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~-----~~~~~~-~D~--~~~~~~~~~~~~~iD 83 (249)
T 1o5i_A 19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-------LKRS-----GHRYVV-CDL--RKDLDLLFEKVKEVD 83 (249)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHT-----CSEEEE-CCT--TTCHHHHHHHSCCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH-------HHhh-----CCeEEE-eeH--HHHHHHHHHHhcCCC
Confidence 5799999999999999999999999999999987421 1111 246667 999 33455555433 699
Q ss_pred EEEEccccccCCc----cccCcchhhhhhhhHHHHHHH----HHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCc
Q 040584 81 AVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLE----VMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNP 152 (347)
Q Consensus 81 ~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~ 152 (347)
+||||||...... ..+.+...+++|+.++.++.+ .+++.+.++||++||...+. +..+...
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~ 152 (249)
T 1o5i_A 84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIENLYT 152 (249)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC-----------CCCCCch
Confidence 9999999754332 233456788999999876655 45555678999999998874 3344578
Q ss_pred hhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH-HHHH-HHHcCCCCceEEecccCCCC
Q 040584 153 YGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM-PFVT-QVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 153 Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~ 228 (347)
|+.+|.+.+.+.+.++.+. .++++++++||.++++.. ..+. .... ......
T Consensus 153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~~~~~~~~~~~-------------- 207 (249)
T 1o5i_A 153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV-----------KELLSEEKKKQVESQI-------------- 207 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH-----------HHHSCHHHHHHHHTTS--------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcc-----------cccchhhHHHHHHhcC--------------
Confidence 9999999999998887763 389999999999998621 0000 1111 111110
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+++++|+|+++++++.... ....+++|++.+|..
T Consensus 208 ---p~~~~~~~~dvA~~i~~l~s~~~-~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 208 ---PMRRMAKPEEIASVVAFLCSEKA-SYLTGQTIVVDGGLS 245 (249)
T ss_dssp ---TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTCC
T ss_pred ---CCCCCcCHHHHHHHHHHHcCccc-cCCCCCEEEECCCcc
Confidence 11247899999999999887522 235689999987753
No 258
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.90 E-value=1.9e-23 Score=179.00 Aligned_cols=211 Identities=18% Similarity=0.156 Sum_probs=151.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--CC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--KF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~ 79 (347)
||+|+||||+|+||++++++|+++|++|++++|+....+...+.+ ..++.++.+|++|.+++.+++++. ..
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 73 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-------SNNVGYRARDLASHQEVEQLFEQLDSIP 73 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-------SSCCCEEECCTTCHHHHHHHHHSCSSCC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-------hhccCeEeecCCCHHHHHHHHHHHhhcC
Confidence 478999999999999999999999999999999765544332221 357789999999999999999853 24
Q ss_pred cEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcC---CCeEEEeccccccCCCCCCCCCCCCCCCCCCc
Q 040584 80 DAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHG---CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNP 152 (347)
Q Consensus 80 d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~ 152 (347)
|+||||||...... ..+.+...+++|+.++.++++++...- ..+||++||...+. +......
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~ 142 (230)
T 3guy_A 74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ-----------PKAQEST 142 (230)
T ss_dssp SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS-----------CCTTCHH
T ss_pred CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC-----------CCCCCch
Confidence 99999999765433 233456688999999999999876541 23999999988762 3445678
Q ss_pred hhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCC
Q 040584 153 YGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDG 230 (347)
Q Consensus 153 Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 230 (347)
|+.||.+.+.+++.++.++ .++++.+++||.+..+. ..... . .
T Consensus 143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~------------------~~~~~--~---------------~ 187 (230)
T 3guy_A 143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEF------------------WETSG--K---------------S 187 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChH------------------HHhcC--C---------------C
Confidence 9999999999999998886 37999999999887641 11100 0 0
Q ss_pred ceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEc
Q 040584 231 TVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265 (347)
Q Consensus 231 ~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv 265 (347)
.....+++.+|+|+++.+++.+.......++.+..
T Consensus 188 ~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~ 222 (230)
T 3guy_A 188 LDTSSFMSAEDAALMIHGALANIGNGYVSDITVNR 222 (230)
T ss_dssp -----CCCHHHHHHHHHHHCCEETTEEEEEEEEEC
T ss_pred CCcccCCCHHHHHHHHHHHHhCcCCCCccceeecC
Confidence 11234788999999999988753322233444444
No 259
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.90 E-value=8.5e-24 Score=180.28 Aligned_cols=207 Identities=16% Similarity=0.109 Sum_probs=156.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~ 81 (347)
|+++||||+|+||++++++|+++|++|++++|+.. +|++|.+++.++++++ ++|+
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------------~D~~~~~~v~~~~~~~g~id~ 62 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------------LDISDEKSVYHYFETIGAFDH 62 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------------CCTTCHHHHHHHHHHHCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------------cCCCCHHHHHHHHHHhCCCCE
Confidence 68999999999999999999999999999987522 7999999999988753 6999
Q ss_pred EEEcccccc-CC----ccccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCCCCCCCCCCCCCCCCCCchh
Q 040584 82 VIHFAGLKA-VG----ESVQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYG 154 (347)
Q Consensus 82 vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~ 154 (347)
||||||... .. ...+.+...+++|+.++.++++++...- -++||++||...+. +..+...|+
T Consensus 63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~Y~ 131 (223)
T 3uce_A 63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK-----------VVANTYVKA 131 (223)
T ss_dssp EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS-----------CCTTCHHHH
T ss_pred EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc-----------CCCCchHHH
Confidence 999999752 21 2334456688999999999999987642 24899999988763 344567899
Q ss_pred hhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCcee
Q 040584 155 RSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVV 233 (347)
Q Consensus 155 ~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 233 (347)
.+|.+.+.+.+.++.++..+++.+++||.+..|... ........ +........ ..
T Consensus 132 asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~-------~~~~~~~~~~~~~~~~~~-----------------~~ 187 (223)
T 3uce_A 132 AINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYK-------GMNADDRDAMYQRTQSHL-----------------PV 187 (223)
T ss_dssp HHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGT-------TSCHHHHHHHHHHHHHHS-----------------TT
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhh-------hcchhhHHHHHHHHhhcC-----------------CC
Confidence 999999999999998875599999999999876211 00000111 122222111 11
Q ss_pred eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcc
Q 040584 234 RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGT 271 (347)
Q Consensus 234 ~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~ 271 (347)
..+.+++|+|+++++++.. +...|+++++.+|..+
T Consensus 188 ~~~~~~~dvA~~~~~l~~~---~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 188 GKVGEASDIAMAYLFAIQN---SYMTGTVIDVDGGALL 222 (223)
T ss_dssp CSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTGGG
T ss_pred CCccCHHHHHHHHHHHccC---CCCCCcEEEecCCeec
Confidence 2367899999999999975 4567899999888654
No 260
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.90 E-value=4.9e-23 Score=179.11 Aligned_cols=220 Identities=17% Similarity=0.209 Sum_probs=158.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCe-EEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH-HHHHHHHccC--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYK-TVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK-AALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~-- 77 (347)
+|+++||||+|+||++++++|+++|++ |++++|+... ...+.+..... +.++.++.+|++|. +++.++++..
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP--KVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT--TSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC--CceEEEEEEecCCChHHHHHHHHHHHH
Confidence 478999999999999999999999997 8899887643 22233333211 34678899999998 8887776532
Q ss_pred ---CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc----C---CCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH----G---CKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 ---~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|+||||||.. ..+.+...+++|+.++.++++++... + .++||++||...+. +.
T Consensus 81 ~~g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 145 (254)
T 1sby_A 81 QLKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------AI 145 (254)
T ss_dssp HHSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CC
T ss_pred hcCCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc-----------CC
Confidence 699999999974 23566789999999999999987643 1 35899999998863 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.....|+.||.+.+.+++.++.+. .++++++++||.+.++..... ..... ..+........
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~-~~~~~~~~~~~------------ 208 (254)
T 1sby_A 146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF----NSWLD-VEPRVAELLLS------------ 208 (254)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC----CCGGG-SCTTHHHHHTT------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccccc----chhhh-hhHHHHHHHhc------------
Confidence 445689999999999999887763 389999999999987621000 00000 00001111110
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
..+.+++|+|++++.++.. ...+++|++.+|.
T Consensus 209 --------~~~~~~~dvA~~i~~~~~~----~~~G~~~~v~gG~ 240 (254)
T 1sby_A 209 --------HPTQTSEQCGQNFVKAIEA----NKNGAIWKLDLGT 240 (254)
T ss_dssp --------SCCEEHHHHHHHHHHHHHH----CCTTCEEEEETTE
T ss_pred --------CCCCCHHHHHHHHHHHHHc----CCCCCEEEEeCCc
Confidence 1234899999999998875 3567899998773
No 261
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.90 E-value=6.2e-23 Score=181.76 Aligned_cols=225 Identities=14% Similarity=0.074 Sum_probs=163.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC-chhHHHHHHHHHhhccCCCCeEEEecCCCC----HHHHHHHHcc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD-NASEIAVAKVKELAGYQGNNMTFHKLDLRD----KAALEVVFAG 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~~~~~~~~ 76 (347)
+|+++||||+|+||++++++|+++|++|++++|+. .......+.+... .+.++.++.+|++| .+++.++++.
T Consensus 23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE---RSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH---STTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh---cCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 47899999999999999999999999999999987 5554444444311 23578899999999 8888887763
Q ss_pred C-----CCcEEEEccccccCCcc--------------ccCcchhhhhhhhHHHHHHHHHHHc----C------CCeEEEe
Q 040584 77 T-----KFDAVIHFAGLKAVGES--------------VQKPLPYFDNNLTGTITLLEVMAAH----G------CKNLVFS 127 (347)
Q Consensus 77 ~-----~~d~vih~a~~~~~~~~--------------~~~~~~~~~~nv~~~~~l~~~~~~~----~------~~~iv~~ 127 (347)
. ++|+||||||....... .+.+...+++|+.++..+++++... + .++||++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 2 69999999997543221 2234568899999999998887643 2 4599999
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH
Q 040584 128 SSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP 205 (347)
Q Consensus 128 SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~ 205 (347)
||...+. +......|+.||.+.+.+.+.++.++ .++++++++||.+++|. . ....
T Consensus 180 sS~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-----------~~~~ 236 (288)
T 2x9g_A 180 CDAMVDQ-----------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-----------MGEE 236 (288)
T ss_dssp CCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-----------SCHH
T ss_pred ecccccC-----------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-----------cChH
Confidence 9988763 33456789999999999998887764 37999999999999862 0 0111
Q ss_pred HHHHHHcCCCCceEEecccCCCCCCceeeee-eeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 206 FVTQVAVGRRPALTVFGTDYSTKDGTVVRDY-IHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
......... + -+ .+ ...+|+|+++++++... .....|+.+++.+|..
T Consensus 237 ~~~~~~~~~--p-----------~~----r~~~~pedvA~~v~~l~s~~-~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 237 EKDKWRRKV--P-----------LG----RREASAEQIADAVIFLVSGS-AQYITGSIIKVDGGLS 284 (288)
T ss_dssp HHHHHHHTC--T-----------TT----SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred HHHHHHhhC--C-----------CC----CCCCCHHHHHHHHHHHhCcc-ccCccCCEEEECcchh
Confidence 222222211 0 01 13 68999999999998752 2346788999987753
No 262
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.90 E-value=3.3e-23 Score=185.96 Aligned_cols=172 Identities=18% Similarity=0.186 Sum_probs=133.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
++||||||+|+||++++++|+++|++|++++|+..+.+...+.+..... ...+.++.+|++|.+++.++++..
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS--GPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999987776665555544311 236888999999999999888642
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----------CCCeEEEeccccccCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----------GCKNLVFSSSATAYGWPKVVPCTE 143 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~iv~~SS~~~yg~~~~~~~~e 143 (347)
++|+||||||...... +.+.+...+++|+.|+.++++++... +.++||++||...+.
T Consensus 87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--------- 157 (319)
T 3ioy_A 87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--------- 157 (319)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC---------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc---------
Confidence 6899999999754433 23445678999999999998876543 245899999988763
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCC
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA 187 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 187 (347)
+......|+.||.+.+.+.+.++.++ .++++++++||.|.++
T Consensus 158 --~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 201 (319)
T 3ioy_A 158 --AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSY 201 (319)
T ss_dssp --CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccC
Confidence 23345689999998777777665543 3799999999999876
No 263
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.90 E-value=6.3e-23 Score=180.90 Aligned_cols=208 Identities=17% Similarity=0.179 Sum_probs=153.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||+|+||++++++|+++|++|++++|+....+...+.+.... ...+.++.+|++|.+++.++++..
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT---GNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---SSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999999999998776665555554432 234588999999999999887643
Q ss_pred CCcEEEEccccccC-C----ccccCcchhhhhhhhHHHHHHHHHHH----cC--CCeEEEeccccccCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAV-G----ESVQKPLPYFDNNLTGTITLLEVMAA----HG--CKNLVFSSSATAYGWPKVVPCTEEFP 146 (347)
Q Consensus 78 ~~d~vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~iv~~SS~~~yg~~~~~~~~e~~~ 146 (347)
++|+||||||.... . ...+.++..+++|+.++.++++++.. .+ .++||++||...+ .+
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~-----------~~ 179 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ-----------TP 179 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT-----------CC
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC-----------CC
Confidence 68999999997533 1 13345566899999999888776553 32 4599999998775 23
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEeccc
Q 040584 147 LQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTD 224 (347)
Q Consensus 147 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 224 (347)
..+...|+.||.+.+.+++.++.+. .++++.+++||.+..+- ............
T Consensus 180 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~------------------~~~~~~~~~~~~------ 235 (281)
T 4dry_A 180 RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM------------------TARMSTGVLQAN------ 235 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------------------------CEEECTT------
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh------------------hhhhcchhhhhh------
Confidence 4556789999999999999888764 37999999999887651 111111000000
Q ss_pred CCCCCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 225 YSTKDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 225 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
.......++..+|+|+++++++..
T Consensus 236 ----~~~~~~~~~~pedvA~~v~fL~s~ 259 (281)
T 4dry_A 236 ----GEVAAEPTIPIEHIAEAVVYMASL 259 (281)
T ss_dssp ----SCEEECCCBCHHHHHHHHHHHHHS
T ss_pred ----hcccccCCCCHHHHHHHHHHHhCC
Confidence 011223477899999999999987
No 264
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.90 E-value=1.1e-23 Score=184.97 Aligned_cols=199 Identities=15% Similarity=0.094 Sum_probs=151.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||+++++.|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL----GAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc----CCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 478999999999999999999999999999999766555444444432 357889999999999998887632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +..
T Consensus 107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~ 175 (272)
T 1yb1_A 107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SVP 175 (272)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CHH
T ss_pred CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------CCC
Confidence 6999999999754332 223455789999999888777654 45677999999988763 223
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc-----CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD-----SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
+...|+.+|.+++.+++.++.+. .++++++++||.+.++.. .. . .
T Consensus 176 ~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~-----------~~-----------~--~------ 225 (272)
T 1yb1_A 176 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI-----------KN-----------P--S------ 225 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST-----------TC-----------T--H------
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcc-----------cc-----------c--c------
Confidence 45679999999999999887764 389999999999987620 00 0 0
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
.....+++.+|+|++++.++..
T Consensus 226 -------~~~~~~~~~~dva~~i~~~~~~ 247 (272)
T 1yb1_A 226 -------TSLGPTLEPEEVVNRLMHGILT 247 (272)
T ss_dssp -------HHHCCCCCHHHHHHHHHHHHHT
T ss_pred -------ccccCCCCHHHHHHHHHHHHHc
Confidence 0012367899999999999987
No 265
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.90 E-value=4.5e-23 Score=177.88 Aligned_cols=207 Identities=16% Similarity=0.148 Sum_probs=155.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc-----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----- 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 76 (347)
+|+++||||+|+||++++++|+++|++|++++|+..... ....++.+|++|.+++.++++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------------SASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999865432 1346778999999998888763
Q ss_pred --CCCcEEEEccccccCCc-----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 77 --TKFDAVIHFAGLKAVGE-----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 77 --~~~d~vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
.++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+. +.
T Consensus 73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 141 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-----------GT 141 (241)
T ss_dssp TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CC
T ss_pred CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc-----------CC
Confidence 26999999999754221 23345678899999999999988764 225999999988763 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc----CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 223 (347)
.+...|+.+|.+.+.+++.++.+. .++++++++||.+-.+ +...... .
T Consensus 142 ~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~------------------~~~~~~~-~--------- 193 (241)
T 1dhr_A 142 PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP------------------MNRKSMP-E--------- 193 (241)
T ss_dssp TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH------------------HHHHHST-T---------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc------------------cccccCc-c---------
Confidence 455789999999999999998874 3699999999987653 1111111 1
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.....++..+|+|+++.+++... .....|+.+++.+++
T Consensus 194 -------~~~~~~~~~~~vA~~v~~l~~~~-~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 194 -------ADFSSWTPLEFLVETFHDWITGN-KRPNSGSLIQVVTTD 231 (241)
T ss_dssp -------SCGGGSEEHHHHHHHHHHHHTTT-TCCCTTCEEEEEEET
T ss_pred -------hhhccCCCHHHHHHHHHHHhcCC-CcCccceEEEEeCCC
Confidence 01123567899999999988752 223567888887654
No 266
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.90 E-value=1.8e-22 Score=176.72 Aligned_cols=210 Identities=16% Similarity=0.084 Sum_probs=156.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC---CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG---YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (347)
+|+|+||||+|+||++++++|+++| ++|++++|+....+.. +.+... ..++.++.+|++|.+++.++++..
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN----HSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH----CTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc----CCceEEEEecCCChHHHHHHHHHHH
Confidence 5789999999999999999999999 9999999987765432 222221 347889999999999998888632
Q ss_pred ------CCcEEEEcccccc-CC----ccccCcchhhhhhhhHHHHHHHHHHHc----------C-----CCeEEEecccc
Q 040584 78 ------KFDAVIHFAGLKA-VG----ESVQKPLPYFDNNLTGTITLLEVMAAH----------G-----CKNLVFSSSAT 131 (347)
Q Consensus 78 ------~~d~vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-----~~~iv~~SS~~ 131 (347)
++|+||||||... .. ...+.+...+++|+.++.++++++... + .++||++||..
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 4999999999754 21 123445668899999999998887543 2 46899999988
Q ss_pred ccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHH
Q 040584 132 AYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQ 209 (347)
Q Consensus 132 ~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 209 (347)
.+.... +..+...|+.+|.+++.+++.++.+. .+++++++|||.+..+-.
T Consensus 176 ~~~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------------------- 227 (267)
T 1sny_A 176 GSIQGN--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG-------------------- 227 (267)
T ss_dssp GCSTTC--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT--------------------
T ss_pred ccccCC--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC--------------------
Confidence 764211 12355689999999999999887763 389999999998876410
Q ss_pred HHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccC
Q 040584 210 VAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGT 267 (347)
Q Consensus 210 ~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~ 267 (347)
+.. .++..+|+|+.++.++.... ....+..|++.+
T Consensus 228 ---~~~-------------------~~~~~~~~a~~~~~~~~~~~-~~~~G~~~~~~g 262 (267)
T 1sny_A 228 ---GSS-------------------APLDVPTSTGQIVQTISKLG-EKQNGGFVNYDG 262 (267)
T ss_dssp ---CTT-------------------CSBCHHHHHHHHHHHHHHCC-GGGTTCEECTTS
T ss_pred ---CCC-------------------CCCCHHHHHHHHHHHHHhcC-cCCCCcEEccCC
Confidence 000 13568999999999998732 224556665543
No 267
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.90 E-value=5.4e-23 Score=178.86 Aligned_cols=228 Identities=17% Similarity=0.103 Sum_probs=164.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+++||||+|+||++++++|+++|+.|+++ .|+..........+... ..++.++.+|++|.+++.++++..
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN----GGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc----CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999886 55544444444444332 457788999999999888777532
Q ss_pred --------CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCC
Q 040584 78 --------KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTE 143 (347)
Q Consensus 78 --------~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e 143 (347)
++|+||||||...... ..+.++..+++|+.++.++++++... +.++||++||...+.
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~--------- 153 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI--------- 153 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS---------
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc---------
Confidence 3999999999754433 22344567889999999999988764 345899999988763
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEe
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVF 221 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
+......|+.||.+.+.+++.++.+. .++++.+++||.+..+..... .. .+.........
T Consensus 154 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~--~~~~~~~~~~~------- 215 (255)
T 3icc_A 154 --SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL-------LS--DPMMKQYATTI------- 215 (255)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT-------TT--SHHHHHHHHHT-------
T ss_pred --CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh-------cc--cHHHHHhhhcc-------
Confidence 33445789999999999999888774 479999999999987631110 00 01111111111
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.....+.+++|+|+++.+++... .....|+++++.+|..
T Consensus 216 ---------~~~~~~~~~~dva~~~~~l~s~~-~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 216 ---------SAFNRLGEVEDIADTAAFLASPD-SRWVTGQLIDVSGGSC 254 (255)
T ss_dssp ---------STTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESSSTT
T ss_pred ---------CCcCCCCCHHHHHHHHHHHhCcc-cCCccCCEEEecCCee
Confidence 11123678999999999988652 2346789999987753
No 268
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.90 E-value=6.6e-23 Score=177.47 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=158.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCC--CCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL--RDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~~~-- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+.... ..+..++.+|+ +|.+++.++++..
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG---QPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC---CCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998776665555554432 24667777777 8998888877643
Q ss_pred ---CCcEEEEccccccC-Cc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAV-GE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 ---~~d~vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||.... .. ..+.+...+++|+.++.++++++. +.+.++||++||...+.
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------- 159 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK----------- 159 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------
Confidence 69999999997432 11 234556789999999999998874 34456999999987652
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc---CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD---SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
+......|+.+|.+.+.+++.++.+. .++++.++.||.+..+ +.......
T Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~------------------~~~~~~~~--------- 212 (247)
T 3i1j_A 160 GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG------------------MRAQAYPD--------- 212 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH------------------HHHHHSTT---------
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc------------------cchhcccc---------
Confidence 34456789999999999999988875 4789999999876653 22222111
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEc
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv 265 (347)
.....+...+|+|+++++++.... ....|+.+++
T Consensus 213 --------~~~~~~~~p~dva~~~~~l~s~~~-~~itG~~i~~ 246 (247)
T 3i1j_A 213 --------ENPLNNPAPEDIMPVYLYLMGPDS-TGINGQALNA 246 (247)
T ss_dssp --------SCGGGSCCGGGGTHHHHHHHSGGG-TTCCSCEEEC
T ss_pred --------cCccCCCCHHHHHHHHHHHhCchh-ccccCeeecC
Confidence 111234678999999999987522 3456777765
No 269
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.90 E-value=5e-23 Score=181.65 Aligned_cols=232 Identities=14% Similarity=0.103 Sum_probs=161.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+. .+.++.++.+|++|.+++.++++..
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA-------HGGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------TBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH-------cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999999875544332222 1357889999999999988887643
Q ss_pred -CCcEEEEccccccCCcc---------ccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGES---------VQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~~---------~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|+||||||....... .+.+...+++|+.++.++++++... +-+++|++||...+.
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 147 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY---------- 147 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS----------
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc----------
Confidence 68999999997532111 1124567889999999998876542 135999999987752
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccH--HHHHHHHcCCCCceEEe
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM--PFVTQVAVGRRPALTVF 221 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 221 (347)
+......|+.||.+.+.+.+.++.++ +.+++.++.||.+..+-......... ...+. +.........
T Consensus 148 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------- 217 (281)
T 3zv4_A 148 -PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLS--EQSISSVPLADMLKSVL------- 217 (281)
T ss_dssp -SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC----------CCHHHHHHHTC-------
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccc--cccccchhHHHHHHhcC-------
Confidence 33455689999999999999998875 34999999999998763211100000 00000 0111111110
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+...+|+|+++++++.........|+++++.+|..
T Consensus 218 ----------p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 218 ----------PIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp ----------TTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred ----------CCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 112367899999999999973233346889999987753
No 270
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.89 E-value=3.9e-22 Score=176.25 Aligned_cols=216 Identities=16% Similarity=0.103 Sum_probs=157.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch-------hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA-------SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+ .....+.+... +.++.++.+|++|.+++.+++
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA----GGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH----TSEEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHH
Confidence 3789999999999999999999999999999998763 23333444333 457889999999999999887
Q ss_pred ccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCCC
Q 040584 75 AGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVPC 141 (347)
Q Consensus 75 ~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~~ 141 (347)
+.. ++|+||||||...... ..+.+...+++|+.++.++++++... +.++||++||...+..
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------ 158 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP------ 158 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC------
Confidence 643 6999999999765433 23344567889999999999987654 4569999999876421
Q ss_pred CCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceE
Q 040584 142 TEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALT 219 (347)
Q Consensus 142 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (347)
.......|+.||.+.+.+++.++.+. .++++.++.||.+... ++......... .
T Consensus 159 ----~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-----------------~~~~~~~~~~~-~-- 214 (285)
T 3sc4_A 159 ----KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-----------------AAVQNLLGGDE-A-- 214 (285)
T ss_dssp ----GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-----------------HHHHHHHTSCC-C--
T ss_pred ----CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-----------------HHHHhhccccc-c--
Confidence 11344789999999999999988874 3799999999843321 12333332211 1
Q ss_pred EecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEcc
Q 040584 220 VFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLG 266 (347)
Q Consensus 220 ~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~ 266 (347)
...+...+|+|+++++++.... ...++.+.+.
T Consensus 215 -------------~~r~~~pedvA~~~~~l~s~~~--~~tG~~i~~d 246 (285)
T 3sc4_A 215 -------------MARSRKPEVYADAAYVVLNKPS--SYTGNTLLCE 246 (285)
T ss_dssp -------------CTTCBCTHHHHHHHHHHHTSCT--TCCSCEEEHH
T ss_pred -------------ccCCCCHHHHHHHHHHHhCCcc--cccceEEEEc
Confidence 1135678999999999998622 3455666554
No 271
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.89 E-value=8.6e-23 Score=175.37 Aligned_cols=197 Identities=17% Similarity=0.128 Sum_probs=147.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+ +.++.++.+|++|.+++.++++..
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-------GNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999999999866554444333 125888999999999998887643
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... ..+.+...+++|+.++.++++++... .-.+||++||...+. +...
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~ 144 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV-----------GKAN 144 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS-----------SCSS
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC-----------CCCC
Confidence 6899999999754322 34456678999999999998887542 123999999987652 3334
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
...|+.||.+.+.+.+.++.+. .++++.+++||.+-.+. . .....
T Consensus 145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~---------------~---~~~~~--------------- 191 (235)
T 3l6e_A 145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF---------------W---DNTDH--------------- 191 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc---------------h---hccCC---------------
Confidence 5689999999999999998875 37899999999887651 0 00000
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
.....++..+|+|+++++++..
T Consensus 192 ---~~~~~~~~pedvA~~v~~l~~~ 213 (235)
T 3l6e_A 192 ---VDPSGFMTPEDAAAYMLDALEA 213 (235)
T ss_dssp --------CBCHHHHHHHHHHHTCC
T ss_pred ---CCCcCCCCHHHHHHHHHHHHhC
Confidence 0011367899999999999875
No 272
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.89 E-value=9.5e-23 Score=179.16 Aligned_cols=217 Identities=17% Similarity=0.038 Sum_probs=158.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHh-CCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLL-GGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|++ +|++|++++|+........+.+... +.++.++.+|++|.+++.++++..
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999 9999999999766555444444332 347889999999999999888643
Q ss_pred --CCcEEEEccccccCCcc----ccCcchhhhhhhhHHHHHHHHHHHcC--CCeEEEeccccccCC-CC----------C
Q 040584 78 --KFDAVIHFAGLKAVGES----VQKPLPYFDNNLTGTITLLEVMAAHG--CKNLVFSSSATAYGW-PK----------V 138 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~~yg~-~~----------~ 138 (347)
++|+||||||....... .+.+...+++|+.++.++++++...- .++||++||...+.. .. .
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 159 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccc
Confidence 69999999997543221 23456789999999999999988752 249999999877632 00 0
Q ss_pred CCCCCCC-------------------CCCCCCchhhhHHHHHHHHHHHhhhc------CCceEEEeecccccCCCCCCCC
Q 040584 139 VPCTEEF-------------------PLQAMNPYGRSKLFIEEICRDVHRSD------SEWKIILLRYFNPVGAHPSGKG 193 (347)
Q Consensus 139 ~~~~e~~-------------------~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~~lR~~~v~G~~~~~~~ 193 (347)
.+++|++ +..|...|+.||.+++.+++.++.++ .++++++++||.+.++..
T Consensus 160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~---- 235 (276)
T 1wma_A 160 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA---- 235 (276)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT----
T ss_pred cccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC----
Confidence 1122211 12244889999999999998887764 389999999999887510
Q ss_pred CCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCC-CCCCCeeEE
Q 040584 194 EDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDD-PKVGCEVYN 264 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~~~~~~~~n 264 (347)
. . ..+++.+|+|+++++++..... ....|+.|+
T Consensus 236 -------~-----------~--------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 236 -------G-----------P--------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp -------C-----------T--------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred -------C-----------c--------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence 0 0 0146899999999999975321 234556554
No 273
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.89 E-value=3.2e-22 Score=177.39 Aligned_cols=226 Identities=14% Similarity=0.055 Sum_probs=163.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEe-CCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH-------------
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVD-NLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA------------- 68 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~------------- 68 (347)
|+++||||+|+||++++++|+++|++|++++ |+........+.+... .+.++.++.+|++|.+
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR---RPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---STTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh---cCCeeEEEEeecCCccccccccccccccc
Confidence 7899999999999999999999999999999 8765554444444311 2357889999999998
Q ss_pred ----HHHHHHccC-----CCcEEEEccccccCCcc------------------ccCcchhhhhhhhHHHHHHHHHHH---
Q 040584 69 ----ALEVVFAGT-----KFDAVIHFAGLKAVGES------------------VQKPLPYFDNNLTGTITLLEVMAA--- 118 (347)
Q Consensus 69 ----~~~~~~~~~-----~~d~vih~a~~~~~~~~------------------~~~~~~~~~~nv~~~~~l~~~~~~--- 118 (347)
++.++++.. ++|+||||||....... .+.+...+++|+.++.++++++..
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 888877643 69999999997543221 233456889999999999887653
Q ss_pred -cC------CCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCC
Q 040584 119 -HG------CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHP 189 (347)
Q Consensus 119 -~~------~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~ 189 (347)
.+ .++||++||...+. +......|+.||.+.+.+.+.++.+. .++.+++++||.+..+.
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~- 234 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD- 234 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-
T ss_pred hcCCCCCCCCcEEEEEechhhcC-----------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-
Confidence 34 46999999988763 33456789999999999999887774 37999999999887641
Q ss_pred CCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 190 SGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
. .. ........... + -+. .+...+|+|+++++++.... ....++++++.+|.
T Consensus 235 ~--------~~---~~~~~~~~~~~----p---------~~~---r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 235 D--------MP---PAVWEGHRSKV----P---------LYQ---RDSSAAEVSDVVIFLCSSKA-KYITGTCVKVDGGY 286 (291)
T ss_dssp G--------SC---HHHHHHHHTTC----T---------TTT---SCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred c--------CC---HHHHHHHHhhC----C---------CCC---CCCCHHHHHHHHHHHhCCcc-cCccCcEEEECCCc
Confidence 0 00 11222222111 0 010 25689999999999987522 34678899998775
Q ss_pred cc
Q 040584 270 GT 271 (347)
Q Consensus 270 ~~ 271 (347)
.+
T Consensus 287 ~~ 288 (291)
T 1e7w_A 287 SL 288 (291)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 274
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.89 E-value=2.6e-22 Score=173.70 Aligned_cols=170 Identities=16% Similarity=0.202 Sum_probs=135.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||+|+||++++++|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++..
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA----GAKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999866555444444332 347888999999999998887632
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+++...+++|+.++.++++++.. .+ ++||++||...+. +..
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~ 150 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV-----------NVR 150 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC-----------CCT
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC-----------CCC
Confidence 6999999999754332 2234566889999999999887653 35 7999999987752 334
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA 187 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 187 (347)
....|+.+|.+.+.+.+.++.+. .++++++++||.+..+
T Consensus 151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 191 (247)
T 2jah_A 151 NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTE 191 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSS
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCc
Confidence 45689999999999998887764 3899999999999876
No 275
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.89 E-value=2e-22 Score=171.67 Aligned_cols=221 Identities=15% Similarity=0.123 Sum_probs=163.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-CCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-KFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 80 (347)
+|+++||||++.||++++++|+++|++|++++|+.+..+. ....++..+.+|++|+++++++++++ ++|
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 80 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA----------PRHPRIRREELDITDSQRLQRLFEALPRLD 80 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS----------CCCTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh----------hhcCCeEEEEecCCCHHHHHHHHHhcCCCC
Confidence 4899999999999999999999999999999998765431 12457889999999999999998876 699
Q ss_pred EEEEccccccCCc--cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhh
Q 040584 81 AVIHFAGLKAVGE--SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGR 155 (347)
Q Consensus 81 ~vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~ 155 (347)
++|||||...... +.++++..+++|+.++..+.+++... +-++||++||...+ .+......|+.
T Consensus 81 iLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~-----------~~~~~~~~Y~a 149 (242)
T 4b79_A 81 VLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST-----------FGSADRPAYSA 149 (242)
T ss_dssp EEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT-----------SCCSSCHHHHH
T ss_pred EEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc-----------CCCCCCHHHHH
Confidence 9999999754322 34466779999999999888765432 23699999998764 23344568999
Q ss_pred hHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCcee
Q 040584 156 SKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVV 233 (347)
Q Consensus 156 sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 233 (347)
||.+...+.+.++.++ .++++.++-||.+--|-.... . .-......+.... ++ +
T Consensus 150 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~-------~-~~~~~~~~~~~~~--Pl-----------g--- 205 (242)
T 4b79_A 150 SKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGL-------K-ADVEATRRIMQRT--PL-----------A--- 205 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC------------C-CCHHHHHHHHHTC--TT-----------C---
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc-------c-CCHHHHHHHHhcC--CC-----------C---
Confidence 9999999999888875 479999999998876521111 0 0112233333221 11 1
Q ss_pred eeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 234 RDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 234 ~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
-+...+|+|+++.+++... .....|+++.+.+|.
T Consensus 206 -R~g~peeiA~~v~fLaSd~-a~~iTG~~l~VDGG~ 239 (242)
T 4b79_A 206 -RWGEAPEVASAAAFLCGPG-ASFVTGAVLAVDGGY 239 (242)
T ss_dssp -SCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTG
T ss_pred -CCcCHHHHHHHHHHHhCch-hcCccCceEEECccH
Confidence 2457899999999998652 235688999997763
No 276
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.89 E-value=1.6e-22 Score=175.75 Aligned_cols=231 Identities=12% Similarity=0.046 Sum_probs=153.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH-ccC-CC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF-AGT-KF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~-~~ 79 (347)
||+++||||+|+||++++++|+++|++|++++|+....+...+ +... +.++..+ |..+.+.+.+.+ +.+ ++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~----~~~~~~~--d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET----YPQLKPM--SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH----CTTSEEC--CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc----CCcEEEE--CHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999987765544333 3322 2234333 555444332222 111 69
Q ss_pred cEEEEccccc-cCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCCC
Q 040584 80 DAVIHFAGLK-AVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM 150 (347)
Q Consensus 80 d~vih~a~~~-~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~ 150 (347)
|+||||||.. .... ..+.+...+++|+.++.++++++. +.+.++||++||...+. +....
T Consensus 74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~ 142 (254)
T 1zmt_A 74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG-----------PWKEL 142 (254)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS-----------CCTTC
T ss_pred CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc-----------CCCCc
Confidence 9999999976 3222 233456789999999999988764 44567999999987752 33455
Q ss_pred CchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCC
Q 040584 151 NPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 151 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
..|+.||.+.+.+++.++.+. .++++++++||.++||....+...+ ................
T Consensus 143 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~--~~~~~~~~~~~~~~~~-------------- 206 (254)
T 1zmt_A 143 STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTE--PWKTNPEHVAHVKKVT-------------- 206 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHH--HHTTCHHHHHHHHHHS--------------
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCc--ccccChHHHHHHhccC--------------
Confidence 789999999999999887774 3799999999999987421110000 0000001111111100
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
....+.+.+|+|+++.+++... .....++++++.+|..
T Consensus 207 ---p~~~~~~p~dvA~~v~~l~s~~-~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 207 ---ALQRLGTQKELGELVAFLASGS-CDYLTGQVFWLAGGFP 244 (254)
T ss_dssp ---SSSSCBCHHHHHHHHHHHHTTS-CGGGTTCEEEESTTCC
T ss_pred ---CCCCCcCHHHHHHHHHHHhCcc-cCCccCCEEEECCCch
Confidence 0112678999999999988752 2235688999987753
No 277
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.88 E-value=2.5e-22 Score=174.57 Aligned_cols=228 Identities=14% Similarity=0.127 Sum_probs=163.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||++.||+++++.|+++|++|++.+|+.+..+...+++ +.+...+.+|++|.+++++++++.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999999866555444333 357788999999999999887643
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMN 151 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~ 151 (347)
++|++|||||.....+ +.++++..+++|+.++..+++++... +-++||++||...+ .+.....
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~-----------~~~~~~~ 171 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS-----------TGTPAFS 171 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG-----------SCCTTCH
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc-----------cCCCCch
Confidence 6999999999755433 34456779999999999999987653 23489999998765 2334456
Q ss_pred chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 152 PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
.|+.||.+...+.+.++.++ .++++.++-||.+-.|.-... ....+..--.+...+...- ++
T Consensus 172 ~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~~~~--Pl----------- 235 (273)
T 4fgs_A 172 VYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL---AGKDPVQQQGLLNALAAQV--PM----------- 235 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC------------CHHHHHHHHHHHHHHS--TT-----------
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHh---hccCchhhHHHHHHHHhcC--CC-----------
Confidence 89999999999999998886 368999999998876521000 0000000001122222111 11
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
+ -+...+|+|+++++++... .....|+++.+.+|.
T Consensus 236 g----R~g~peeiA~~v~FLaSd~-a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 236 G----RVGRAEEVAAAALFLASDD-SSFVTGAELFVDGGS 270 (273)
T ss_dssp S----SCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred C----CCcCHHHHHHHHHHHhCch-hcCccCCeEeECcCh
Confidence 1 1457899999999999652 235688999997774
No 278
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.88 E-value=2.1e-21 Score=169.21 Aligned_cols=228 Identities=12% Similarity=0.065 Sum_probs=159.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHh---CCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLL---GGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (347)
+|+++||||+|+||++++++|++ +|++|++++|+....+...+.+.... .+.++.++.+|++|.+++.++++..
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ--PDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC--TTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC--CCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999 89999999998766555544443321 1346788999999999988877532
Q ss_pred ------CCc--EEEEccccccC--C-----ccccCcchhhhhhhhHHHHHHHHHHHc------CCCeEEEeccccccCCC
Q 040584 78 ------KFD--AVIHFAGLKAV--G-----ESVQKPLPYFDNNLTGTITLLEVMAAH------GCKNLVFSSSATAYGWP 136 (347)
Q Consensus 78 ------~~d--~vih~a~~~~~--~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~iv~~SS~~~yg~~ 136 (347)
++| +||||||.... . ...+.+...+++|+.++.++++++... +.++||++||...+.
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-- 161 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-- 161 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC--
Confidence 468 99999997532 1 123455678999999999999988753 235799999988762
Q ss_pred CCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC
Q 040584 137 KVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216 (347)
Q Consensus 137 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
+..+...|+.||.+.+.+.+.++.+..++++.++.||.+-.+ +...+... .....
T Consensus 162 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~---------------~~~~~~~~-~~~~~ 216 (259)
T 1oaa_A 162 ---------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND---------------MQQLARET-SKDPE 216 (259)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH---------------HHHHHHHH-CSCHH
T ss_pred ---------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc---------------hHHHHhhc-cCChh
Confidence 344567899999999999999998876789999999876543 11110000 00000
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEcc
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLG 266 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~ 266 (347)
....+. .......+...+|+|+++++++.. .....|+.+++.
T Consensus 217 ~~~~~~------~~~p~~~~~~p~dvA~~v~~l~~~--~~~itG~~i~vd 258 (259)
T 1oaa_A 217 LRSKLQ------KLKSDGALVDCGTSAQKLLGLLQK--DTFQSGAHVDFY 258 (259)
T ss_dssp HHHHHH------HHHHTTCSBCHHHHHHHHHHHHHH--CCSCTTEEEETT
T ss_pred HHHHHH------HhhhcCCcCCHHHHHHHHHHHHhh--ccccCCcEEecc
Confidence 000000 000012367899999999999975 234566777663
No 279
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.88 E-value=1.3e-22 Score=174.79 Aligned_cols=225 Identities=16% Similarity=0.117 Sum_probs=165.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+++||||++.||+++++.|+++|++|++.+|+.+..++..+++... +.++..+.+|++|++++++++++.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK----GYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 489999999999999999999999999999999877666666665543 457888999999999998877542
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----H-cCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----A-HGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~-~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|++|||||.....+ +.++++..+++|+.++..+.+++. + .+-++||++||...+. +.
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~-----------~~ 153 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-----------AR 153 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------BC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC-----------CC
Confidence 6999999999765443 345667789999999998877643 2 2446999999987652 33
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH--HHHHHHHcCCCCceEEecc
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM--PFVTQVAVGRRPALTVFGT 223 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~ 223 (347)
.....|+.||.+...+.+.++.++ .++++.++-||.+..|-. ..+. +...+...... ++
T Consensus 154 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~-----------~~~~~~~~~~~~~~~~~-Pl----- 216 (255)
T 4g81_D 154 PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN-----------TALIEDKQFDSWVKSST-PS----- 216 (255)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG-----------HHHHTCHHHHHHHHHHS-TT-----
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh-----------hcccCCHHHHHHHHhCC-CC-----
Confidence 445689999999999999888875 379999999998875410 0000 11111111110 11
Q ss_pred cCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 224 DYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 224 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
+ -+...+|+|+++.+++... .....|+++.+.+|.
T Consensus 217 ------~----R~g~pediA~~v~fL~S~~-a~~iTG~~i~VDGG~ 251 (255)
T 4g81_D 217 ------Q----RWGRPEELIGTAIFLSSKA-SDYINGQIIYVDGGW 251 (255)
T ss_dssp ------C----SCBCGGGGHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred ------C----CCcCHHHHHHHHHHHhCch-hCCCcCCEEEECCCe
Confidence 1 1456889999999988652 235688999997763
No 280
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.88 E-value=7.2e-22 Score=174.72 Aligned_cols=202 Identities=15% Similarity=0.098 Sum_probs=150.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+|+|+||||+|+||+++++.|+++|++|++++|+....+...+.+.... ..++.++.+|++|.+++.++++..
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG---AASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC---CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998766555444443321 236788999999999988887632
Q ss_pred -CCcEEEEc-cccccCCc---cccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHF-AGLKAVGE---SVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 -~~d~vih~-a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+|||| ||...... ..+.+...+++|+.++.++++++... +.++||++||...+. +..+
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 173 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV-----------AYPM 173 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS-----------CCTT
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc-----------CCCC
Confidence 69999999 56543211 22344568899999999998876542 246999999988763 3345
Q ss_pred CCchhhhHHHHHHHHHHHhhhc----CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
...|+.||.+.+.+++.++.+. .++.+++++||.+..+ +......+
T Consensus 174 ~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~------------------~~~~~~~~------------ 223 (286)
T 1xu9_A 174 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE------------------TAMKAVSG------------ 223 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH------------------HHHHHSCG------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh------------------hHHHhccc------------
Confidence 6789999999999998877653 4899999999987754 11111111
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHh
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
.....+++.+|+|++++.++..
T Consensus 224 -----~~~~~~~~~~~vA~~i~~~~~~ 245 (286)
T 1xu9_A 224 -----IVHMQAAPKEECALEIIKGGAL 245 (286)
T ss_dssp -----GGGGGCBCHHHHHHHHHHHHHT
T ss_pred -----cccCCCCCHHHHHHHHHHHHhc
Confidence 1112367899999999999886
No 281
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.88 E-value=2.7e-21 Score=175.06 Aligned_cols=215 Identities=12% Similarity=0.105 Sum_probs=157.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh-------HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS-------EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
+|+++||||+|+||++++++|+++|++|++++|+..+. ....+.+... +.++.++.+|++|.+++.+++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~----g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV----GGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHH
Confidence 37899999999999999999999999999999987642 2233333332 457888999999999999888
Q ss_pred ccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCC
Q 040584 75 AGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPC 141 (347)
Q Consensus 75 ~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~ 141 (347)
+.. ++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+..
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~------ 194 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP------ 194 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC------
Confidence 743 6999999999765332 2334567899999999999998753 35579999999876531
Q ss_pred CCCCCCCCCCchhhhHHHHHHHHHHHhhhc-CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEE
Q 040584 142 TEEFPLQAMNPYGRSKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTV 220 (347)
Q Consensus 142 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
.+......|+.||.+++.+++.++.++ .++.+.++.||.+... ++... ..+.
T Consensus 195 ---~~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T-----------------~~~~~-~~~~------ 247 (346)
T 3kvo_A 195 ---VWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT-----------------AAMDM-LGGP------ 247 (346)
T ss_dssp ---GGTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC-----------------HHHHH-HCC-------
T ss_pred ---CCCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc-----------------HHHHh-hccc------
Confidence 113456789999999999999998875 4789999999864432 12222 1111
Q ss_pred ecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEcc
Q 040584 221 FGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLG 266 (347)
Q Consensus 221 ~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~ 266 (347)
.....+...+|+|+++++++.. . ....|+.+ +.
T Consensus 248 ----------~~~~r~~~pedvA~~v~~L~s~-~-~~itG~~i-vd 280 (346)
T 3kvo_A 248 ----------GIESQCRKVDIIADAAYSIFQK-P-KSFTGNFV-ID 280 (346)
T ss_dssp -----------CGGGCBCTHHHHHHHHHHHTS-C-TTCCSCEE-EH
T ss_pred ----------cccccCCCHHHHHHHHHHHHhc-C-CCCCceEE-EC
Confidence 1112356789999999999976 2 23455655 54
No 282
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.88 E-value=2.2e-21 Score=167.83 Aligned_cols=231 Identities=17% Similarity=0.117 Sum_probs=163.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||++.||++++++|+++|+.|++++|+.+.... .+.+.+. ..++.++.+|++|.+++++++++.
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~~----~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQR----QPRATYLPVELQDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHHH----CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHhc----CCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 799999999999999999999999999999998775432 3333333 457889999999999988877542
Q ss_pred CCcEEEEccccccCC---ccccCcchhhhhhhhHHHHHHHHHHHc---CCCeEEEeccccccCCCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVG---ESVQKPLPYFDNNLTGTITLLEVMAAH---GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMN 151 (347)
Q Consensus 78 ~~d~vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~ 151 (347)
++|++|||||..... .+.+.+...+++|+.++..+.+++... +-++||++||...+. +.....
T Consensus 83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-----------~~~~~~ 151 (258)
T 4gkb_A 83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT-----------GQGNTS 151 (258)
T ss_dssp CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH-----------CCSSCH
T ss_pred CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc-----------CCCCch
Confidence 699999999975432 234456678899999999887765432 236999999987652 334456
Q ss_pred chhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 152 PYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
.|+.||.+.+.+.+.++.++ .++++.++-||.+--|-.......... -......+.... ++
T Consensus 152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~----~~~~~~~~~~~~--pl----------- 214 (258)
T 4gkb_A 152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFED----PEAKLAEIAAKV--PL----------- 214 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---------------CHHHHHHTTC--TT-----------
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccC----hHHHHHHHHhcC--CC-----------
Confidence 89999999999999888775 479999999999876521111000000 000112222111 00
Q ss_pred CceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 230 GTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
+ +-+...+|+|+++++++... .....|+++.+.+|.+
T Consensus 215 g---~R~g~peeiA~~v~fLaS~~-a~~iTG~~i~VDGG~T 251 (258)
T 4gkb_A 215 G---RRFTTPDEIADTAVFLLSPR-ASHTTGEWLFVDGGYT 251 (258)
T ss_dssp T---TSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTTT
T ss_pred C---CCCcCHHHHHHHHHHHhCch-hcCccCCeEEECCCcc
Confidence 1 12557899999999998652 2357889999987753
No 283
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.87 E-value=3.4e-21 Score=169.29 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=153.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch-------hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA-------SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
+|+++||||+|+||++++++|+++|++|++++|+... .....+.+... +.++.++.+|++|.+++.+++
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA----GGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH----TSEEEEEECCTTCHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc----CCeEEEEeCCCCCHHHHHHHH
Confidence 4789999999999999999999999999999998764 22223333332 457889999999999998887
Q ss_pred ccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHH----cCCCeEEEeccccccCCCCCCCC
Q 040584 75 AGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAA----HGCKNLVFSSSATAYGWPKVVPC 141 (347)
Q Consensus 75 ~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~~yg~~~~~~~ 141 (347)
+.. ++|+||||||...... ..+.+...+++|+.++.++++++.. .+.++||++||...+...
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 156 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA----- 156 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH-----
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----
Confidence 643 6999999999764432 2234566888999999999888654 345699999998765210
Q ss_pred CCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceE
Q 040584 142 TEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALT 219 (347)
Q Consensus 142 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (347)
+......|+.||.+.+.+.+.++.++ .++++.++.||.+.... +. ....+
T Consensus 157 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~--------------~~----~~~~~------ 208 (274)
T 3e03_A 157 ----WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD--------------AI----NMLPG------ 208 (274)
T ss_dssp ----HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------------C------
T ss_pred ----CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc--------------hh----hhccc------
Confidence 02345679999999999999888775 37999999998544220 11 11110
Q ss_pred EecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeE
Q 040584 220 VFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVY 263 (347)
Q Consensus 220 ~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~ 263 (347)
.....+...+|+|+++.+++... .....|+.+
T Consensus 209 -----------~~~~~~~~pedvA~~v~~l~s~~-~~~itG~~i 240 (274)
T 3e03_A 209 -----------VDAAACRRPEIMADAAHAVLTRE-AAGFHGQFL 240 (274)
T ss_dssp -----------CCGGGSBCTHHHHHHHHHHHTSC-CTTCCSCEE
T ss_pred -----------ccccccCCHHHHHHHHHHHhCcc-ccccCCeEE
Confidence 01112568999999999998762 223455666
No 284
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.87 E-value=2.3e-22 Score=173.84 Aligned_cols=207 Identities=14% Similarity=0.103 Sum_probs=134.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHH---HHHccC-
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALE---VVFAGT- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~~~- 77 (347)
+|+++||||+|+||++++++|++ |+.|++++|+........ + ..++.++.+|+++..... +.++..
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA----E-----IEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH----T-----STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH----h-----hcCCcceecccchHHHHHHHHHHHHhcC
Confidence 47899999999999999999988 999999998754433221 1 236788999998775422 222222
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
++|+||||||...... +.+.+...+++|+.++.++++++. +.+ ++||++||...+. +...
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~-----------~~~~ 142 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG-----------PHPG 142 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc-----------CCCC
Confidence 6999999999765432 233456788999999888877654 333 6999999988763 3345
Q ss_pred CCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
...|+.||.+.+.+++.++.+. .++++.+++||.+.++.. ........
T Consensus 143 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~------------------~~~~~~~~------------ 192 (245)
T 3e9n_A 143 NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPML------------------QGLMDSQG------------ 192 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchh------------------hhhhhhhh------------
Confidence 6789999999999999888764 379999999999887620 01000000
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEc
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNL 265 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv 265 (347)
.......+++++|+|+++++++.. ...+.++|+
T Consensus 193 -~~~~~~~~~~p~dvA~~i~~l~~~----~~~~~~~~i 225 (245)
T 3e9n_A 193 -TNFRPEIYIEPKEIANAIRFVIDA----GETTQITNV 225 (245)
T ss_dssp ----CCGGGSCHHHHHHHHHHHHTS----CTTEEEEEE
T ss_pred -cccccccCCCHHHHHHHHHHHHcC----CCccceeee
Confidence 001112478899999999999986 235577776
No 285
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.87 E-value=1.3e-21 Score=166.93 Aligned_cols=221 Identities=17% Similarity=0.148 Sum_probs=162.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+++||||++.||+++++.|+++|++|++.+|+.. +...+.+.+. +.++..+.+|++|+++++++++..++|+
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~----g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD----GGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT----TCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh----CCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 479999999999999999999999999999998754 2334444443 4578899999999999888887668999
Q ss_pred EEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcC-CCeEEEeccccccCCCCCCCCCCCCCCCCCCc
Q 040584 82 VIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHG-CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNP 152 (347)
Q Consensus 82 vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~ 152 (347)
+|||||.....+ +.++++..+++|+.+++.+.+++. +.+ -++||++||...+- +......
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~-----------g~~~~~~ 151 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ-----------GGIRVPS 151 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCSSCHH
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC-----------CCCCChH
Confidence 999999765443 344567799999999999888643 333 46999999987642 3334568
Q ss_pred hhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH--H-HHHHHHcCCCCceEEecccCCC
Q 040584 153 YGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM--P-FVTQVAVGRRPALTVFGTDYST 227 (347)
Q Consensus 153 Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~g~~~~~ 227 (347)
|+.||.+...+.+.++.++ .++++.++-||.+--|- ...+. + ....+.. +. ++
T Consensus 152 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~-----------~~~~~~~~~~~~~~~~-~~-Pl--------- 209 (247)
T 4hp8_A 152 YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNN-----------TEALRADAARNKAILE-RI-PA--------- 209 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG-----------GHHHHTSHHHHHHHHT-TC-TT---------
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc-----------hhhcccCHHHHHHHHh-CC-CC---------
Confidence 9999999999999888875 47999999999876541 00010 0 1111221 11 11
Q ss_pred CCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 228 KDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 228 ~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
+ -+-..+|+|.++++++... .....|+++.|.+|
T Consensus 210 --g----R~g~peeiA~~v~fLaSd~-a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 210 --G----RWGHSEDIAGAAVFLSSAA-ADYVHGAILNVDGG 243 (247)
T ss_dssp --S----SCBCTHHHHHHHHHHTSGG-GTTCCSCEEEESTT
T ss_pred --C----CCcCHHHHHHHHHHHhCch-hcCCcCCeEEECcc
Confidence 1 2456899999999988652 23568899998776
No 286
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.86 E-value=3.3e-21 Score=168.97 Aligned_cols=231 Identities=14% Similarity=0.046 Sum_probs=156.7
Q ss_pred ceEEEEcC--CCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 3 KNILVIGG--VGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 3 ~~vlItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
|+++|||| +|+||++++++|+++|++|++++|+.... .+.+.+. .+.++.++.+|++|.+++.++++..
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 68999999 99999999999999999999999876432 1111111 1346788999999999999888642
Q ss_pred -----CCcEEEEccccccC-----Cc----cccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCC
Q 040584 78 -----KFDAVIHFAGLKAV-----GE----SVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPC 141 (347)
Q Consensus 78 -----~~d~vih~a~~~~~-----~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~ 141 (347)
++|+||||||.... .. ..+.+...+++|+.++.++++++... .-++||++||...+
T Consensus 82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-------- 153 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-------- 153 (269)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS--------
T ss_pred hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc--------
Confidence 59999999997541 11 23345568899999999999998754 12589999997653
Q ss_pred CCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHH----HHHHHHcCCC
Q 040584 142 TEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMP----FVTQVAVGRR 215 (347)
Q Consensus 142 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 215 (347)
+......|+.||.+.+.+.+.++.++ .++++.+++||.+..+...... .......... .........
T Consensus 154 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~- 226 (269)
T 2h7i_A 154 ----AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIV--GGALGEEAGAQIQLLEEGWDQRA- 226 (269)
T ss_dssp ----CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHH--TTTTCHHHHHHHHHHHHHHHHHC-
T ss_pred ----ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccc--cccchhhHHHHHHHHHHhhhccC-
Confidence 22345789999999999999887774 4899999999987653100000 0000000000 001111100
Q ss_pred CceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 216 PALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 216 ~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
+ -+ +.+...+|+|+++.+++... .....|+++++.+|..
T Consensus 227 ---p---------~~---rr~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~~ 265 (269)
T 2h7i_A 227 ---P---------IG---WNMKDATPVAKTVCALLSDW-LPATTGDIIYADGGAH 265 (269)
T ss_dssp ---T---------TC---CCTTCCHHHHHHHHHHHSSS-CTTCCSEEEEESTTGG
T ss_pred ---C---------cc---cCCCCHHHHHHHHHHHhCch-hccCcceEEEecCCee
Confidence 0 01 12557899999999998752 2346789999977743
No 287
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.86 E-value=1.3e-20 Score=163.65 Aligned_cols=228 Identities=13% Similarity=0.088 Sum_probs=163.2
Q ss_pred CceEEEEcCCC--cccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVG--YIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+++||||+| .||.++++.|+++|++|++.+|+....+...+.+.+. .+.++.++.+|++|.+++.++++..
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL---NQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG---TCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 38999999887 8999999999999999999999877766655555543 2357889999999999988877542
Q ss_pred ---CCcEEEEccccccCCc----cc----cCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCC
Q 040584 78 ---KFDAVIHFAGLKAVGE----SV----QKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEE 144 (347)
Q Consensus 78 ---~~d~vih~a~~~~~~~----~~----~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~ 144 (347)
++|++|||||...... .. +.+...+++|+.++..+..++... +-++||++||....
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~----------- 151 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----------- 151 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT-----------
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc-----------
Confidence 6999999999653221 11 223345678888888888777654 23589999998764
Q ss_pred CCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEec
Q 040584 145 FPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFG 222 (347)
Q Consensus 145 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 222 (347)
.+......|+.||.+.+.+.+.++.++ .++++.++.||.+-.|..... ...-.....+.... ++
T Consensus 152 ~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~--------~~~~~~~~~~~~~~--Pl---- 217 (256)
T 4fs3_A 152 FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV--------GGFNTILKEIKERA--PL---- 217 (256)
T ss_dssp SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC--------TTHHHHHHHHHHHS--TT----
T ss_pred cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc--------cCCHHHHHHHHhcC--CC----
Confidence 244456789999999999999888775 379999999998765421110 01112333332211 11
Q ss_pred ccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 223 TDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 223 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
+ -+...+|+|+++.+++... .....|+++.+.+|-
T Consensus 218 -------~----R~g~peevA~~v~fL~Sd~-a~~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 218 -------K----RNVDQVEVGKTAAYLLSDL-SSGVTGENIHVDSGF 252 (256)
T ss_dssp -------S----SCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred -------C----CCcCHHHHHHHHHHHhCch-hcCccCCEEEECcCH
Confidence 1 1456899999999998652 234678999997774
No 288
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.86 E-value=3.2e-21 Score=172.42 Aligned_cols=183 Identities=20% Similarity=0.145 Sum_probs=137.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH-HHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK-AALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~--- 77 (347)
+|+|+||||+|+||++++++|+++|++|++++|+..+.....+.+... ...++.++.+|++|. +++.++++..
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS---NHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999877665555555432 235789999999998 7777766532
Q ss_pred --CCcEEEEccccccCC----------------------------------ccccCcchhhhhhhhHHHHHHHHHHH---
Q 040584 78 --KFDAVIHFAGLKAVG----------------------------------ESVQKPLPYFDNNLTGTITLLEVMAA--- 118 (347)
Q Consensus 78 --~~d~vih~a~~~~~~----------------------------------~~~~~~~~~~~~nv~~~~~l~~~~~~--- 118 (347)
++|+||||||..... ...+.++..+++|+.++.++++++..
T Consensus 89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~ 168 (311)
T 3o26_A 89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ 168 (311)
T ss_dssp HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence 699999999975321 12233455789999999999887653
Q ss_pred -cCCCeEEEeccccccCCCCC--------------------------------CCCCCCCCCCCCCchhhhHHHHHHHHH
Q 040584 119 -HGCKNLVFSSSATAYGWPKV--------------------------------VPCTEEFPLQAMNPYGRSKLFIEEICR 165 (347)
Q Consensus 119 -~~~~~iv~~SS~~~yg~~~~--------------------------------~~~~e~~~~~~~~~Y~~sK~~~e~~~~ 165 (347)
.+.++||++||...+..... ....+.....+...|+.||.+.+.+++
T Consensus 169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~ 248 (311)
T 3o26_A 169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248 (311)
T ss_dssp TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence 34569999999876522100 001111122345679999999999999
Q ss_pred HHhhhcCCceEEEeecccccCC
Q 040584 166 DVHRSDSEWKIILLRYFNPVGA 187 (347)
Q Consensus 166 ~~~~~~~~~~~~~lR~~~v~G~ 187 (347)
.+++++.++.+.++.||.|..+
T Consensus 249 ~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 249 VLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp HHHHHCTTSEEEEECCCSBCSG
T ss_pred HHHhhcCCceEEEecCCceecC
Confidence 9999987899999999988764
No 289
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.86 E-value=9.4e-21 Score=165.20 Aligned_cols=170 Identities=16% Similarity=0.099 Sum_probs=131.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc-----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG----- 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 76 (347)
+|+++||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|++|.+++.++++.
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL----GGQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999999866555444444432 34678899999999988887653
Q ss_pred -CCCcEEEEccc--cc-----cCC----ccccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCC
Q 040584 77 -TKFDAVIHFAG--LK-----AVG----ESVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVP 140 (347)
Q Consensus 77 -~~~d~vih~a~--~~-----~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~ 140 (347)
.++|+|||||| .. ... ...+.+...+++|+.++.++.+++. +.+.++||++||...+.
T Consensus 81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------ 154 (260)
T 2qq5_A 81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ------ 154 (260)
T ss_dssp TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS------
T ss_pred CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC------
Confidence 15899999994 32 111 1223455688889999987776654 44567999999988752
Q ss_pred CCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCC
Q 040584 141 CTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA 187 (347)
Q Consensus 141 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 187 (347)
..+...|+.||.+.+.+.+.++.+. .++++++++||.+..+
T Consensus 155 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 197 (260)
T 2qq5_A 155 ------YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTE 197 (260)
T ss_dssp ------CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTT
T ss_pred ------CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccH
Confidence 1234689999999999999887663 3899999999998876
No 290
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.85 E-value=6.1e-21 Score=171.75 Aligned_cols=175 Identities=18% Similarity=0.199 Sum_probs=133.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhh--ccCCCCeEEEecCCCCHHHHHHHHccC--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELA--GYQGNNMTFHKLDLRDKAALEVVFAGT-- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 77 (347)
+|+|+||||+|+||++++++|+++|++|+++.|+........+.+.... ...+.++.++.+|++|.+++.++++..
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 4789999999999999999999999998887765544332222222221 111347889999999999999998753
Q ss_pred -CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 78 -~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
++|+||||||...... ..+.+...+++|+.++.++++++ ++.+.++||++||...+. +..
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~-----------~~~ 150 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------GLP 150 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------CCT
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc-----------CCC
Confidence 5999999999754322 23345678999999999998885 445677999999987752 223
Q ss_pred CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA 187 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~ 187 (347)
....|+.||.+++.+++.++.+. .++++++++||.|..+
T Consensus 151 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~ 191 (327)
T 1jtv_A 151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (327)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccCh
Confidence 45689999999999999888763 3899999999998875
No 291
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.85 E-value=2.1e-20 Score=161.38 Aligned_cols=222 Identities=11% Similarity=0.026 Sum_probs=147.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEE-e--CCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH-HHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVV-D--NLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV-VFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~ 77 (347)
+|+++||||+|+||++++++|+++|++|+++ + |+....+...+.+ .+.+.. |..+.+.+.+ +.+.+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--------~~~~~~--~~~~v~~~~~~~~~~~ 70 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--------PGTIAL--AEQKPERLVDATLQHG 70 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--------TTEEEC--CCCCGGGHHHHHGGGS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--------CCCccc--CHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999998 5 7654443322221 122222 5444443333 33322
Q ss_pred -CCcEEEEccccccC---Cc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAV---GE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEF 145 (347)
Q Consensus 78 -~~d~vih~a~~~~~---~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~ 145 (347)
++|+||||||.... .. ..+.+...+++|+.++.++++++. +.+.++||++||...+.
T Consensus 71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------- 139 (244)
T 1zmo_A 71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK----------- 139 (244)
T ss_dssp SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------
T ss_pred CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC-----------
Confidence 69999999997543 22 233456689999999999888765 44567999999988763
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccH--HHHHHHHcCCCCceEEe
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLM--PFVTQVAVGRRPALTVF 221 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 221 (347)
+......|+.||.+.+.+.+.++.+. .++++++++||.+-.+... . ...+. ........... +
T Consensus 140 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------~-~~~~~~~~~~~~~~~~~~-p---- 206 (244)
T 1zmo_A 140 PLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYF-------P-TSDWENNPELRERVDRDV-P---- 206 (244)
T ss_dssp CCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTB-------C-HHHHHHCHHHHHHHHHHC-T----
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc-------c-cccccchHHHHHHHhcCC-C----
Confidence 33455789999999999999887764 3799999999988765100 0 00000 11111111000 0
Q ss_pred cccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 222 GTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 222 g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
...+...+|+|+++.+++... .....++.+.+.+|.
T Consensus 207 -----------~~r~~~pe~vA~~v~~l~s~~-~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 207 -----------LGRLGRPDEMGALITFLASRR-AAPIVGQFFAFTGGY 242 (244)
T ss_dssp -----------TCSCBCHHHHHHHHHHHHTTT-TGGGTTCEEEESTTC
T ss_pred -----------CCCCcCHHHHHHHHHHHcCcc-ccCccCCEEEeCCCC
Confidence 012568999999999998752 223567889887664
No 292
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.85 E-value=1.3e-20 Score=176.33 Aligned_cols=222 Identities=15% Similarity=0.026 Sum_probs=158.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC----
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT---- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (347)
+++++||||+|+||.++++.|+++|++|++++|+... +...+..... ++.++.+|++|.+++.++++..
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~------~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV------GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH------TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999886432 2222222222 4578999999999988887642
Q ss_pred --CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc----CCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 --KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH----GCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 --~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
.+|+||||||...... +.+.+...+++|+.++.++.+++... +..+||++||...+. +.
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~-----------g~ 354 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA-----------GN 354 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH-----------CC
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC-----------CC
Confidence 3999999999765432 33445678999999999999998875 566999999987652 23
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDY 225 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 225 (347)
.....|+.+|...+.+++.++.+. .+++++++.||.+..+-.. .+...........
T Consensus 355 ~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----------~~~~~~~~~~~~~----------- 412 (454)
T 3u0b_A 355 RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTE-----------AIPLATREVGRRL----------- 412 (454)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---------------------CHHHHHS-----------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhh-----------hcchhhHHHHHhh-----------
Confidence 345789999999999998887664 4899999999998875210 0000000100000
Q ss_pred CCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 226 STKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 226 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.....+...+|+++++.+++... .....++++++.++.
T Consensus 413 -----~~l~r~g~pedvA~~v~fL~s~~-a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 413 -----NSLFQGGQPVDVAELIAYFASPA-SNAVTGNTIRVCGQA 450 (454)
T ss_dssp -----BTTSSCBCHHHHHHHHHHHHCGG-GTTCCSCEEEESSSB
T ss_pred -----ccccCCCCHHHHHHHHHHHhCCc-cCCCCCcEEEECCcc
Confidence 01112457899999999988752 235678999997764
No 293
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.84 E-value=9.1e-21 Score=169.90 Aligned_cols=271 Identities=16% Similarity=0.117 Sum_probs=172.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC---------CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN---------LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV 72 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (347)
+|+++||||+|+||+++++.|+++|++|++.++ +..+.+...+.+... .. ...+|+.|.+++.+
T Consensus 9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~----~~---~~~~D~~~~~~~~~ 81 (319)
T 1gz6_A 9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----GG---KAVANYDSVEAGEK 81 (319)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----TC---EEEEECCCGGGHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh----CC---eEEEeCCCHHHHHH
Confidence 378999999999999999999999999998754 333333333444332 11 23479999887766
Q ss_pred HHcc----C-CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccc-cCCCCC
Q 040584 73 VFAG----T-KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATA-YGWPKV 138 (347)
Q Consensus 73 ~~~~----~-~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~-yg~~~~ 138 (347)
+++. + ++|+||||||...... +.+.++..+++|+.++.++++++ ++.+.++||++||... ++
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~---- 157 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG---- 157 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC----
Confidence 6542 2 6999999999754322 33455678999999999888876 3445679999999754 43
Q ss_pred CCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCC
Q 040584 139 VPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRP 216 (347)
Q Consensus 139 ~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
..+...|+.||.+.+.+.+.++.+. .++++++++||.+ .+. .....
T Consensus 158 --------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~-----------~~~~~------------ 205 (319)
T 1gz6_A 158 --------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRM-----------TETVM------------ 205 (319)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STT-----------TGGGS------------
T ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccc-----------ccccC------------
Confidence 2245689999999999999988774 3799999999875 320 00000
Q ss_pred ceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCcccHHHHHHHHHHHhCCCCCcccCCCC
Q 040584 217 ALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRR 296 (347)
Q Consensus 217 ~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 296 (347)
+.....++..+|+|+++++++.. .....++.|++.++...... +.+..|. .....+ .
T Consensus 206 -------------~~~~~~~~~p~dvA~~~~~l~s~--~~~~tG~~~~v~GG~~~~~~-----~~~~~~~--~~~~~~-~ 262 (319)
T 1gz6_A 206 -------------PEDLVEALKPEYVAPLVLWLCHE--SCEENGGLFEVGAGWIGKLR-----WERTLGA--IVRKRN-Q 262 (319)
T ss_dssp -------------CHHHHHHSCGGGTHHHHHHHTST--TCCCCSCEEEEETTEEEEEE-----EEECCCE--ECCBTT-B
T ss_pred -------------ChhhhccCCHHHHHHHHHHHhCc--hhhcCCCEEEECCCeEEEEe-----eeeccce--eccCCC-C
Confidence 00111245788999999988865 12356789998777432210 0000010 000000 0
Q ss_pred CCCchhhccChHHHHHhcCCcccccHHHHHHHHHHHHhhCCC
Q 040584 297 PGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPY 338 (347)
Q Consensus 297 ~~~~~~~~~d~~k~~~~lg~~p~~~~~~~i~~~~~~~~~~~~ 338 (347)
....+...---+...+..|+....++.+.+++.++++.+.+.
T Consensus 263 ~~~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (319)
T 1gz6_A 263 PMTPEAVRDNWVKICDFSNASKPKSIQESTGGIIEVLHKIDS 304 (319)
T ss_dssp CCCHHHHHHTHHHHTCCTTCBCCCCHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHhhccccccCCCchHHHHHHHHHHHhhccc
Confidence 011111100111233445777667999999999887766543
No 294
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.84 E-value=4.1e-20 Score=174.57 Aligned_cols=203 Identities=16% Similarity=0.170 Sum_probs=149.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCe-EEEEeCCCchh---HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYK-TVVVDNLDNAS---EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
+++++||||+|+||.++++.|+++|+. |++++|+.... ....+.+... +.++.++.+|++|.+++.++++..
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~----g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL----GARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc----CCEEEEEEeCCCCHHHHHHHHHHH
Confidence 478999999999999999999999995 88898876432 2233333332 457889999999999999999853
Q ss_pred ----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCC
Q 040584 78 ----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQA 149 (347)
Q Consensus 78 ----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~ 149 (347)
.+|+|||+||...... +.+.....+++|+.++.++.++++..+.++||++||...+- +...
T Consensus 302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~-----------g~~g 370 (486)
T 2fr1_A 302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF-----------GAPG 370 (486)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------CCTT
T ss_pred HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcC-----------CCCC
Confidence 4699999999765322 23345568888999999999999888888999999976541 1223
Q ss_pred CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKD 229 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (347)
...|+.+|..++.+..++... ++++++++||.+.+++ +. ...... .+
T Consensus 371 ~~~Yaaaka~l~~la~~~~~~--gi~v~~i~pG~~~~~g--------------m~---~~~~~~---~~----------- 417 (486)
T 2fr1_A 371 LGGYAPGNAYLDGLAQQRRSD--GLPATAVAWGTWAGSG--------------MA---EGPVAD---RF----------- 417 (486)
T ss_dssp CTTTHHHHHHHHHHHHHHHHT--TCCCEEEEECCBC--------------------------------C-----------
T ss_pred CHHHHHHHHHHHHHHHHHHhc--CCeEEEEECCeeCCCc--------------cc---chhHHH---HH-----------
Confidence 468999999999988876543 8999999999988641 00 000000 00
Q ss_pred CceeeeeeeHHHHHHHHHHHHHh
Q 040584 230 GTVVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 230 ~~~~~~~i~v~D~a~a~~~~~~~ 252 (347)
......+++.+|+++++..++..
T Consensus 418 ~~~g~~~i~~e~~a~~l~~~l~~ 440 (486)
T 2fr1_A 418 RRHGVIEMPPETACRALQNALDR 440 (486)
T ss_dssp TTTTEECBCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCCHHHHHHHHHHHHhC
Confidence 01123578999999999999986
No 295
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.83 E-value=1.1e-19 Score=157.56 Aligned_cols=221 Identities=15% Similarity=0.124 Sum_probs=153.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC-----
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT----- 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----- 77 (347)
|+++||||++.||++++++|+++|++|++.+|+.... ..+...+.+|++|.+++.++++..
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------------LPEELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999999999875432 123457889999999988877542
Q ss_pred CCcEEEEccccccCC------ccccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVG------ESVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 78 ~~d~vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
++|++|||||..... .+.+++...+++|+.++..+.+++. +.+-++||++||...+- +.
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~-----------~~ 146 (261)
T 4h15_A 78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL-----------PL 146 (261)
T ss_dssp SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CC
T ss_pred CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc-----------CC
Confidence 699999999964321 1334566789999999998877644 44567999999987641 22
Q ss_pred C-CCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCc-------
Q 040584 148 Q-AMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPA------- 217 (347)
Q Consensus 148 ~-~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 217 (347)
. ....|+.||.+.+.+.+.++.++ .++++.++.||.+--|. ...+...........
T Consensus 147 ~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~--------------~~~~~~~~~~~~~~~~~~~~~~ 212 (261)
T 4h15_A 147 PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA--------------SVRLAERLAKQAGTDLEGGKKI 212 (261)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH--------------HHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc--------------hhhhhHHHHHhhccchhhHHHH
Confidence 2 34679999999999999888875 47999999998876431 111111110000000
Q ss_pred eEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 218 LTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 218 ~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
+...- ......-+...+|+|+++.+++... .....|+++++.+|-
T Consensus 213 ~~~~~------~~~PlgR~g~peevA~~v~fLaS~~-a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 213 IMDGL------GGIPLGRPAKPEEVANLIAFLASDR-AASITGAEYTIDGGT 257 (261)
T ss_dssp HHHHT------TCCTTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTC
T ss_pred HHHHh------cCCCCCCCcCHHHHHHHHHHHhCch-hcCccCcEEEECCcC
Confidence 00000 0001112567899999999988652 235688999997774
No 296
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.81 E-value=1.1e-18 Score=165.44 Aligned_cols=202 Identities=16% Similarity=0.205 Sum_probs=148.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchh---HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNAS---EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
+++|+||||+|+||.++++.|+++|+ .|++++|+.... ....+++.. .+.++.++.+|++|.+++.++++..
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~----~g~~v~~~~~Dvtd~~~v~~~~~~~ 334 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG----HGCEVVHAACDVAERDALAALVTAY 334 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT----TTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh----cCCEEEEEEeCCCCHHHHHHHHhcC
Confidence 47899999999999999999999999 588888876432 223333332 2457889999999999999999854
Q ss_pred CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHc-CCCeEEEeccccc-cCCCCCCCCCCCCCCCCCC
Q 040584 78 KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAH-GCKNLVFSSSATA-YGWPKVVPCTEEFPLQAMN 151 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~~-yg~~~~~~~~e~~~~~~~~ 151 (347)
.+|+|||+||...... ..+.....+++|+.++.++.+++... +.++||++||... +| .....
T Consensus 335 ~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g------------~~g~~ 402 (511)
T 2z5l_A 335 PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWG------------NAGQG 402 (511)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTC------------CTTBH
T ss_pred CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCC------------CCCCH
Confidence 6999999999765432 22334567889999999999998776 6789999999754 33 23346
Q ss_pred chhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCc
Q 040584 152 PYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGT 231 (347)
Q Consensus 152 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 231 (347)
.|+.+|..++.+++.+.. .++++++++||.+-+. ++..... ...+..
T Consensus 403 ~YaaaKa~ld~la~~~~~--~gi~v~sv~pG~~~~t----------gm~~~~~--~~~~~~------------------- 449 (511)
T 2z5l_A 403 AYAAANAALDALAERRRA--AGLPATSVAWGLWGGG----------GMAAGAG--EESLSR------------------- 449 (511)
T ss_dssp HHHHHHHHHHHHHHHHHT--TTCCCEEEEECCBCST----------TCCCCHH--HHHHHH-------------------
T ss_pred HHHHHHHHHHHHHHHHHH--cCCcEEEEECCcccCC----------ccccccc--HHHHHh-------------------
Confidence 899999999999987654 3899999999877321 1111111 111110
Q ss_pred eeeeeeeHHHHHHHHHHHHHh
Q 040584 232 VVRDYIHVVDLADGHIAALRK 252 (347)
Q Consensus 232 ~~~~~i~v~D~a~a~~~~~~~ 252 (347)
....+++.+|+++++..++..
T Consensus 450 ~g~~~l~~e~~a~~l~~al~~ 470 (511)
T 2z5l_A 450 RGLRAMDPDAAVDALLGAMGR 470 (511)
T ss_dssp HTBCCBCHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhC
Confidence 012368899999999999987
No 297
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.80 E-value=1.4e-20 Score=169.33 Aligned_cols=172 Identities=12% Similarity=0.078 Sum_probs=124.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-------eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-------KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
.|||+||||+||||++++..|+++|+ +|+++++.+.... .......+. ...+.++ .|+.+.+++.+++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~-~~g~~~dl~---~~~~~~~-~di~~~~~~~~a~ 78 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKA-LEGVVMELE---DCAFPLL-AGLEATDDPKVAF 78 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHH-HHHHHHHHH---TTTCTTE-EEEEEESCHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhh-ccchhhhhh---ccccccc-CCeEeccChHHHh
Confidence 37899999999999999999999996 8999987542111 111111111 1111222 5776666677888
Q ss_pred ccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CC-eEEEeccccc-cCCCCCCCCC-CCC-CCCC
Q 040584 75 AGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CK-NLVFSSSATA-YGWPKVVPCT-EEF-PLQA 149 (347)
Q Consensus 75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~iv~~SS~~~-yg~~~~~~~~-e~~-~~~~ 149 (347)
+ ++|+|||+||..... ...+.++++.|+.++.++++++++.+ .+ +++++|+... .. +.. |.. +.+|
T Consensus 79 ~--~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p 149 (327)
T 1y7t_A 79 K--DADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNP 149 (327)
T ss_dssp T--TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCG
T ss_pred C--CCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCCh
Confidence 7 699999999976432 34567789999999999999999985 54 7888777431 10 011 112 3456
Q ss_pred CCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCC
Q 040584 150 MNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 188 (347)
Q Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~ 188 (347)
.+.|+.+|...|++...+++.+ +++.+++|+++|||||
T Consensus 150 ~~~yg~tkl~~er~~~~~a~~~-g~~~~~vr~~~V~G~h 187 (327)
T 1y7t_A 150 RNFTAMTRLDHNRAKAQLAKKT-GTGVDRIRRMTVWGNH 187 (327)
T ss_dssp GGEEECCHHHHHHHHHHHHHHH-TCCGGGEECCEEEBCS
T ss_pred hheeccchHHHHHHHHHHHHHh-CcChhheeeeEEEcCC
Confidence 6789999999999999888776 8999999999999986
No 298
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.79 E-value=1.5e-18 Score=163.36 Aligned_cols=170 Identities=20% Similarity=0.222 Sum_probs=134.8
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCch---hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNA---SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
|+++++||||+|+||.++++.|+++|+ .|++++|+... .....+.+... +.++.++.+|++|.+++.++++.
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~----g~~v~~~~~Dvtd~~~v~~~~~~ 313 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL----GVRVTIAACDAADREALAALLAE 313 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHT
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc----CCeEEEEEccCCCHHHHHHHHHH
Confidence 568999999999999999999999998 77888886433 23333334332 45788999999999999999875
Q ss_pred C----CCcEEEEccccc-cCCc----cccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCC
Q 040584 77 T----KFDAVIHFAGLK-AVGE----SVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPL 147 (347)
Q Consensus 77 ~----~~d~vih~a~~~-~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~ 147 (347)
. ++|+|||+||.. .... +.+.....+++|+.++.++.+++.....++||++||...+- +.
T Consensus 314 i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~-----------g~ 382 (496)
T 3mje_A 314 LPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW-----------GS 382 (496)
T ss_dssp CCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------TC
T ss_pred HHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC-----------CC
Confidence 3 589999999976 3222 23345668899999999999999988888999999976641 22
Q ss_pred CCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCC
Q 040584 148 QAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGA 187 (347)
Q Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~ 187 (347)
.....|+.+|...+.+.+++... +++++++.||.+.++
T Consensus 383 ~g~~~YaAaKa~ldala~~~~~~--Gi~v~sV~pG~w~~~ 420 (496)
T 3mje_A 383 GGQPGYAAANAYLDALAEHRRSL--GLTASSVAWGTWGEV 420 (496)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHT--TCCCEEEEECEESSS
T ss_pred CCcHHHHHHHHHHHHHHHHHHhc--CCeEEEEECCcccCC
Confidence 34568999999999999876543 999999999988764
No 299
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.79 E-value=6.7e-19 Score=156.46 Aligned_cols=231 Identities=9% Similarity=0.030 Sum_probs=146.4
Q ss_pred CceEEEEcCC--CcccHHHHHHHHhCCCeEEEEeCCCchhH----HHHHHHHHhhccCCCC----eEEEecC--------
Q 040584 2 AKNILVIGGV--GYIGSHTVLQLLLGGYKTVVVDNLDNASE----IAVAKVKELAGYQGNN----MTFHKLD-------- 63 (347)
Q Consensus 2 ~~~vlItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~D-------- 63 (347)
+|+++||||+ |+||++++++|+++|++|++++|++.... ...+.+.......... ...+.+|
T Consensus 8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 87 (297)
T 1d7o_A 8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPED 87 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhh
Confidence 3789999999 99999999999999999999876421100 0000011110000000 2333333
Q ss_pred CCC------------HHHHHHHHccC-----CCcEEEEcccccc--CC----ccccCcchhhhhhhhHHHHHHHHHHHc-
Q 040584 64 LRD------------KAALEVVFAGT-----KFDAVIHFAGLKA--VG----ESVQKPLPYFDNNLTGTITLLEVMAAH- 119 (347)
Q Consensus 64 l~d------------~~~~~~~~~~~-----~~d~vih~a~~~~--~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~- 119 (347)
+.+ .+++.++++.. ++|+||||||... .. .+.+.+...+++|+.++.++++++...
T Consensus 88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 167 (297)
T 1d7o_A 88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM 167 (297)
T ss_dssp SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 321 33444444321 6999999998532 11 133455678999999999999998764
Q ss_pred -CCCeEEEeccccccCCCCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhhhc---CCceEEEeecccccCCCCCCCCC
Q 040584 120 -GCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSD---SEWKIILLRYFNPVGAHPSGKGE 194 (347)
Q Consensus 120 -~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~ 194 (347)
..++||++||...+. +.... ..|+.||.+.+.+.+.++.++ .++++++++||.+.+|...
T Consensus 168 ~~~g~iv~isS~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~---- 232 (297)
T 1d7o_A 168 NPGGASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK---- 232 (297)
T ss_dssp EEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS----
T ss_pred ccCceEEEEecccccc-----------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhh----
Confidence 125899999987652 22223 479999999999999888763 3899999999999987311
Q ss_pred CCCCCCCccHH-HHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCCc
Q 040584 195 DPRGIPNNLMP-FVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGKG 270 (347)
Q Consensus 195 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~~ 270 (347)
.. ...+ +........ ++ ..+...+|+|+++++++... .....++.+++.+|..
T Consensus 233 -~~----~~~~~~~~~~~~~~--p~---------------~r~~~pedvA~~v~~l~s~~-~~~itG~~i~vdgG~~ 286 (297)
T 1d7o_A 233 -AI----GFIDTMIEYSYNNA--PI---------------QKTLTADEVGNAAAFLVSPL-ASAITGATIYVDNGLN 286 (297)
T ss_dssp -CC----SHHHHHHHHHHHHS--SS---------------CCCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTGG
T ss_pred -hc----cccHHHHHHhhccC--CC---------------CCCCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCce
Confidence 00 0112 222222111 11 12468999999999888652 2245778999987743
No 300
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.76 E-value=1.6e-18 Score=168.20 Aligned_cols=210 Identities=15% Similarity=0.095 Sum_probs=143.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeC---------CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDN---------LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV 72 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (347)
+|+++||||+|+||++++++|+++|++|++++| +....+...+.+... ... ..+|++|.+++.+
T Consensus 19 gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~----~~~---~~~D~~d~~~~~~ 91 (613)
T 3oml_A 19 GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA----GGE---AVADYNSVIDGAK 91 (613)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT----TCC---EEECCCCGGGHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh----CCe---EEEEeCCHHHHHH
Confidence 478999999999999999999999999999877 444444444444432 112 3479999988888
Q ss_pred HHccC-----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHH----HHcCCCeEEEeccccccCCCCCC
Q 040584 73 VFAGT-----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVM----AAHGCKNLVFSSSATAYGWPKVV 139 (347)
Q Consensus 73 ~~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~~yg~~~~~ 139 (347)
+++.. ++|+||||||...... +.+.+...+++|+.++.++++++ ++.+.++||++||...+-
T Consensus 92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~----- 166 (613)
T 3oml_A 92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY----- 166 (613)
T ss_dssp HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH-----
T ss_pred HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC-----
Confidence 87643 6999999999764432 34456678999999999998887 444567999999976541
Q ss_pred CCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCc
Q 040584 140 PCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPA 217 (347)
Q Consensus 140 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (347)
+......|+.||.+.+.+.+.++.+. .++.+.++.|+.+- + ...+..
T Consensus 167 ------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~----------------------~~~~~~-- 215 (613)
T 3oml_A 167 ------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-R----------------------MTEGIL-- 215 (613)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CCCC--
T ss_pred ------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-h----------------------hhhhcc--
Confidence 23345689999999999999888775 37899999987421 1 000000
Q ss_pred eEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC
Q 040584 218 LTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG 268 (347)
Q Consensus 218 ~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~ 268 (347)
.......+..+|+|+++.+++... ....|+++++.+|
T Consensus 216 ------------~~~~~~~~~pedvA~~v~~L~s~~--~~~tG~~i~vdGG 252 (613)
T 3oml_A 216 ------------PDILFNELKPKLIAPVVAYLCHES--CEDNGSYIESAAG 252 (613)
T ss_dssp ------------CHHHHTTCCGGGTHHHHHHTTSTT--CCCCSCEEEEETT
T ss_pred ------------chhhhhcCCHHHHHHHHHHhcCCC--cCCCceEEEECCC
Confidence 011122347889999999888762 3457788887655
No 301
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.75 E-value=9.4e-18 Score=159.66 Aligned_cols=166 Identities=17% Similarity=0.160 Sum_probs=129.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCe-EEEE-eCCCc-------------hhHHHHHHHHHhhccCCCCeEEEecCCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYK-TVVV-DNLDN-------------ASEIAVAKVKELAGYQGNNMTFHKLDLRD 66 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~-v~~~-~r~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 66 (347)
+++++||||+|.||.++++.|+++|+. |+++ +|+.. ......+.+... +.++.++.+|++|
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL----GATATVVTCDLTD 326 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH----TCEEEEEECCTTS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc----CCEEEEEECCCCC
Confidence 478999999999999999999999998 5566 77742 233344444443 4578899999999
Q ss_pred HHHHHHHHccC----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcC-----CCeEEEecccccc
Q 040584 67 KAALEVVFAGT----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHG-----CKNLVFSSSATAY 133 (347)
Q Consensus 67 ~~~~~~~~~~~----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~iv~~SS~~~y 133 (347)
.+++.++++.. .+|+|||+||...... +.+.....+++|+.++.++.+++.... .++||++||...+
T Consensus 327 ~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~ 406 (525)
T 3qp9_A 327 AEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI 406 (525)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence 99999998753 5899999999765432 233456688999999999999988765 6799999998765
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccc
Q 040584 134 GWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184 (347)
Q Consensus 134 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v 184 (347)
- +......|+.+|..++.+..++.. .+++++++.||.+
T Consensus 407 ~-----------g~~g~~~YaaaKa~l~~lA~~~~~--~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 407 W-----------GGAGQGAYAAGTAFLDALAGQHRA--DGPTVTSVAWSPW 444 (525)
T ss_dssp T-----------CCTTCHHHHHHHHHHHHHHTSCCS--SCCEEEEEEECCB
T ss_pred C-----------CCCCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEECCcc
Confidence 2 233456899999999998765543 3899999999987
No 302
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=99.73 E-value=1.5e-17 Score=148.96 Aligned_cols=235 Identities=14% Similarity=0.074 Sum_probs=144.3
Q ss_pred ceEEEEcC--CCcccHHHHHHHHhCCCeEEEEeCCCch-------hHHHHHHHHHhhc-cCCCCeEEEecCC--------
Q 040584 3 KNILVIGG--VGYIGSHTVLQLLLGGYKTVVVDNLDNA-------SEIAVAKVKELAG-YQGNNMTFHKLDL-------- 64 (347)
Q Consensus 3 ~~vlItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~Dl-------- 64 (347)
|+++|||| +|+||++++++|+++|++|++++|++.. .....+.+..+.. ........+.+|+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV 89 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence 68999999 8999999999999999999998875310 0000011111100 0000124444443
Q ss_pred ----C--------CHHHHHHHHccC-----CCcEEEEcccccc--CC----ccccCcchhhhhhhhHHHHHHHHHHHc--
Q 040584 65 ----R--------DKAALEVVFAGT-----KFDAVIHFAGLKA--VG----ESVQKPLPYFDNNLTGTITLLEVMAAH-- 119 (347)
Q Consensus 65 ----~--------d~~~~~~~~~~~-----~~d~vih~a~~~~--~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-- 119 (347)
+ |.+++.++++.. ++|+||||||... .. ...+.+...+++|+.++.++++++...
T Consensus 90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 169 (315)
T 2o2s_A 90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMN 169 (315)
T ss_dssp CHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEE
T ss_pred hhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 2 133455544321 6999999999642 11 123445678999999999999988653
Q ss_pred CCCeEEEeccccccCCCCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhhhc---CCceEEEeecccccCCCCCCCCCC
Q 040584 120 GCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSD---SEWKIILLRYFNPVGAHPSGKGED 195 (347)
Q Consensus 120 ~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~ 195 (347)
.-++||++||...+. +.... ..|+.||.+.+.+.+.++.++ .++++.+++||.+..+-.......
T Consensus 170 ~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~ 238 (315)
T 2o2s_A 170 EGGSAVTLSYLAAER-----------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKS 238 (315)
T ss_dssp EEEEEEEEEEGGGTS-----------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCS
T ss_pred cCCEEEEEecccccc-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccc
Confidence 125899999987652 22223 479999999999999887763 489999999998865410000000
Q ss_pred CCCCCCccHHHH-HHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 196 PRGIPNNLMPFV-TQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 196 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
. ...+.... ....... + ...+...+|+|+++++++... .....|+.+.+.+|.
T Consensus 239 --~-~~~~~~~~~~~~~~~~--p---------------~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 239 --G-EKSFIDYAIDYSYNNA--P---------------LRRDLHSDDVGGAALFLLSPL-ARAVSGVTLYVDNGL 292 (315)
T ss_dssp --S-SSCHHHHHHHHHHHHS--S---------------SCCCCCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTG
T ss_pred --c-cchhHHHHHHHHhccC--C---------------CCCCCCHHHHHHHHHHHhCch-hccCcCCEEEECCCe
Confidence 0 00011111 1111100 0 012467899999999988752 234678899887774
No 303
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=99.73 E-value=1.2e-17 Score=149.95 Aligned_cols=236 Identities=14% Similarity=0.053 Sum_probs=128.3
Q ss_pred ceEEEEcC--CCcccHHHHHHHHhCCCeEEEEeCCC-----------chhHH-----------HHHHHHHhhccCCCCeE
Q 040584 3 KNILVIGG--VGYIGSHTVLQLLLGGYKTVVVDNLD-----------NASEI-----------AVAKVKELAGYQGNNMT 58 (347)
Q Consensus 3 ~~vlItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~-----------~~~~~-----------~~~~~~~~~~~~~~~~~ 58 (347)
|+++|||| +|+||+++++.|+++|++|++++|++ .+... ..+++..... ......
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 88 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV-DLVFDK 88 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC---------------------------------CCSE
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc-cccccc
Confidence 68999999 89999999999999999999987642 11110 0111110000 000124
Q ss_pred EEecCC--CC------------------HHHHHHHHccC-----CCcEEEEcccccc--CCc----cccCcchhhhhhhh
Q 040584 59 FHKLDL--RD------------------KAALEVVFAGT-----KFDAVIHFAGLKA--VGE----SVQKPLPYFDNNLT 107 (347)
Q Consensus 59 ~~~~Dl--~d------------------~~~~~~~~~~~-----~~d~vih~a~~~~--~~~----~~~~~~~~~~~nv~ 107 (347)
.+.+|+ .+ .+++.++++.. ++|+||||||... ... ..+.+...+++|+.
T Consensus 89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~ 168 (319)
T 2ptg_A 89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY 168 (319)
T ss_dssp EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence 444442 22 22445444321 6999999999642 111 23445678899999
Q ss_pred HHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhhhc---CCceEEEeec
Q 040584 108 GTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQAM-NPYGRSKLFIEEICRDVHRSD---SEWKIILLRY 181 (347)
Q Consensus 108 ~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~lR~ 181 (347)
++.++++++... .-++||++||...+. +.... ..|+.||.+.+.+.+.++.++ .++++.+++|
T Consensus 169 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P 237 (319)
T 2ptg_A 169 SFVSLLQHFLPLMKEGGSALALSYIASEK-----------VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA 237 (319)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCceEEEEecccccc-----------ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence 999999988764 125999999987642 22223 479999999999999887763 3899999999
Q ss_pred ccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCe
Q 040584 182 FNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCE 261 (347)
Q Consensus 182 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~ 261 (347)
|.+..+......... .. .+...... .+. .......+...+|+|+++++++... .....|+
T Consensus 238 G~v~T~~~~~~~~~~---~~---~~~~~~~~----~~~---------~~~p~~r~~~peevA~~v~~L~s~~-~~~itG~ 297 (319)
T 2ptg_A 238 GPLKSRAASAIGKAG---DK---TFIDLAID----YSE---------ANAPLQKELESDDVGRAALFLLSPL-ARAVTGA 297 (319)
T ss_dssp CCCC--------------------------------------------------CCCHHHHHHHHHHHTSGG-GTTCCSC
T ss_pred CCccChhhhhccccc---ch---hhHHHHHH----HHh---------ccCCCCCCCCHHHHHHHHHHHhCcc-cCCccCC
Confidence 998765211000000 00 00000000 000 0001123568999999999988752 2346789
Q ss_pred eEEccCCCc
Q 040584 262 VYNLGTGKG 270 (347)
Q Consensus 262 ~~nv~~~~~ 270 (347)
++.+.+|..
T Consensus 298 ~i~vdGG~~ 306 (319)
T 2ptg_A 298 TLYVDNGLH 306 (319)
T ss_dssp EEEESTTCT
T ss_pred EEEECCCce
Confidence 999987754
No 304
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=99.71 E-value=3.9e-17 Score=147.12 Aligned_cols=175 Identities=11% Similarity=-0.033 Sum_probs=122.5
Q ss_pred CceEEEEcCCC--cccHHHHHHHHhCCCeEEEEeCCCchh--HHHHHHHH---Hhh---ccCCCCeEEEecCCCCH--H-
Q 040584 2 AKNILVIGGVG--YIGSHTVLQLLLGGYKTVVVDNLDNAS--EIAVAKVK---ELA---GYQGNNMTFHKLDLRDK--A- 68 (347)
Q Consensus 2 ~~~vlItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~~~~~~---~~~---~~~~~~~~~~~~Dl~d~--~- 68 (347)
+|+++||||++ .||.+++++|+++|++|++..|++... ....+... ... ......+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 57899999875 999999999999999999877653110 00000000 000 11122367788888876 5
Q ss_pred -----------------HHHHHHccC-----CCcEEEEcccccc--CCc----cccCcchhhhhhhhHHHHHHHHHHHc-
Q 040584 69 -----------------ALEVVFAGT-----KFDAVIHFAGLKA--VGE----SVQKPLPYFDNNLTGTITLLEVMAAH- 119 (347)
Q Consensus 69 -----------------~~~~~~~~~-----~~d~vih~a~~~~--~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~- 119 (347)
++.++++.. ++|+||||||... ... ..+.+...+++|+.++..+++++...
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 666655432 6999999999632 111 23445678999999999999987654
Q ss_pred -CCCeEEEeccccccCCCCCCCCCCCCCCCCCC-chhhhHHHHHHHHHHHhhhc---CCceEEEeecccccCC
Q 040584 120 -GCKNLVFSSSATAYGWPKVVPCTEEFPLQAMN-PYGRSKLFIEEICRDVHRSD---SEWKIILLRYFNPVGA 187 (347)
Q Consensus 120 -~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~-~Y~~sK~~~e~~~~~~~~~~---~~~~~~~lR~~~v~G~ 187 (347)
.-++||++||...+. +..... .|+.||.+.+.+.+.++.+. .++.+.++.||.+-.+
T Consensus 162 ~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 162 KPQSSIISLTYHASQK-----------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred hhCCeEEEEeCccccC-----------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 115899999987652 233343 89999999999998887764 2899999999988654
No 305
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.66 E-value=9.6e-16 Score=148.25 Aligned_cols=212 Identities=19% Similarity=0.153 Sum_probs=143.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCC-CCHHHHH-HHHccC-C
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL-RDKAALE-VVFAGT-K 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~-~~~~~~-~ 78 (347)
+|+++||||++.||+++++.|+++|++|++.+|.. .+...+++... +.++..+.+|+ .+.+.+. ++.+.+ +
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~----g~~~~~~~~Dv~~~~~~~~~~~~~~~G~ 395 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA----GGEAWPDQHDVAKDSEAIIKNVIDKYGT 395 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT----TCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc----CCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999987632 23334444332 23566677888 5544332 222222 6
Q ss_pred CcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCCCCCCCCCCCCC
Q 040584 79 FDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAM 150 (347)
Q Consensus 79 ~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~ 150 (347)
+|++|||||...... +.+.+...+++|+.++.++.+++. +.+-++||++||...+- +....
T Consensus 396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~-----------~~~~~ 464 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY-----------GNFGQ 464 (604)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------CCTTB
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc-----------CCCCC
Confidence 999999999754322 334566789999999998877654 33456999999976531 22234
Q ss_pred CchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCceEEecccCCCC
Q 040584 151 NPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPALTVFGTDYSTK 228 (347)
Q Consensus 151 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 228 (347)
..|+.||.+...+.+.++.+. .++++.++.||. -.+ +.. .... . .
T Consensus 465 ~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~---------------m~~---~~~~-~--~----------- 511 (604)
T 2et6_A 465 ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA---------------MTL---SIMR-E--Q----------- 511 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC---------------C-------------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc---------------ccc---ccCc-h--h-----------
Confidence 679999999999999888774 378999999872 111 100 0000 0 0
Q ss_pred CCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCCC
Q 040584 229 DGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTGK 269 (347)
Q Consensus 229 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~~ 269 (347)
.......+|+|+++.+++... .. ..++++.+.+|.
T Consensus 512 ----~~~~~~pe~vA~~v~~L~s~~-~~-itG~~~~vdGG~ 546 (604)
T 2et6_A 512 ----DKNLYHADQVAPLLVYLGTDD-VP-VTGETFEIGGGW 546 (604)
T ss_dssp -----CCSSCGGGTHHHHHHTTSTT-CC-CCSCEEEEETTE
T ss_pred ----hccCCCHHHHHHHHHHHhCCc-cC-CCCcEEEECCCe
Confidence 012346889999999887652 23 678899887763
No 306
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.64 E-value=4.9e-15 Score=143.30 Aligned_cols=227 Identities=13% Similarity=0.122 Sum_probs=150.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC---------chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD---------NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV 72 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (347)
+|+++||||++.||+++++.|+++|+.|++.+|.. ...+...+++... +.... +|+.|.++.++
T Consensus 8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~----g~~~~---~d~~d~~~~~~ 80 (604)
T 2et6_A 8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN----GGVAV---ADYNNVLDGDK 80 (604)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT----TCEEE---EECCCTTCHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc----CCeEE---EEcCCHHHHHH
Confidence 37899999999999999999999999999987754 3333334444332 12222 45555443333
Q ss_pred HH----ccC-CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHH----HcCCCeEEEeccccccCCCCCC
Q 040584 73 VF----AGT-KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMA----AHGCKNLVFSSSATAYGWPKVV 139 (347)
Q Consensus 73 ~~----~~~-~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~~yg~~~~~ 139 (347)
++ +.+ ++|++|||||...... +.++++..+++|+.++..+.+++. +.+-++||++||...+-
T Consensus 81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~----- 155 (604)
T 2et6_A 81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY----- 155 (604)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC-----
Confidence 32 222 6999999999754322 334567799999999998877654 34556999999976531
Q ss_pred CCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEEEeecccccCCCCCCCCCCCCCCCCccHHHHHHHHcCCCCc
Q 040584 140 PCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKGEDPRGIPNNLMPFVTQVAVGRRPA 217 (347)
Q Consensus 140 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (347)
+......|+.||.+...+.+.++.+. .++++.++.|+ +-. ++.... ..
T Consensus 156 ------~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T------------------~m~~~~---~~-- 205 (604)
T 2et6_A 156 ------GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS------------------RMTESI---MP-- 205 (604)
T ss_dssp ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC------------------HHHHTT---SC--
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC------------------cccccc---CC--
Confidence 22234579999999999999888774 37899998885 111 111100 00
Q ss_pred eEEecccCCCCCCceeeeeeeHHHHHHHHHHHHHhcCCCCCCCeeEEccCC------------------CcccHHHHHHH
Q 040584 218 LTVFGTDYSTKDGTVVRDYIHVVDLADGHIAALRKLDDPKVGCEVYNLGTG------------------KGTSVLEMVAA 279 (347)
Q Consensus 218 ~~~~g~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~nv~~~------------------~~~s~~e~~~~ 279 (347)
.........+|++.++.+++... ....++++.+.+| ..++..++.+.
T Consensus 206 -------------~~~~~~~~pe~vA~~v~~L~s~~--~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 270 (604)
T 2et6_A 206 -------------PPMLEKLGPEKVAPLVLYLSSAE--NELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKR 270 (604)
T ss_dssp -------------HHHHTTCSHHHHHHHHHHHTSSS--CCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHH
T ss_pred -------------hhhhccCCHHHHHHHHHHHhCCc--ccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHH
Confidence 00011246899999999888762 3456788887654 34677888887
Q ss_pred HHHHhC
Q 040584 280 FEKASG 285 (347)
Q Consensus 280 i~~~~g 285 (347)
+.++..
T Consensus 271 ~~~~~~ 276 (604)
T 2et6_A 271 FSEILD 276 (604)
T ss_dssp HHHHTC
T ss_pred HHHhhc
Confidence 776654
No 307
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=99.63 E-value=3e-15 Score=135.20 Aligned_cols=173 Identities=12% Similarity=-0.035 Sum_probs=123.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHh-CCCeEEEEeCCCchhH------------HHHHHHHHhhccCCCCeEEEecCCCCHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLL-GGYKTVVVDNLDNASE------------IAVAKVKELAGYQGNNMTFHKLDLRDKA 68 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 68 (347)
.|+++||||++.||.++++.|++ .|+.|++++|...... ...+.+.. .+..+..+.+|++|.+
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~----~G~~a~~i~~Dvtd~~ 122 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ----KGLYAKSINGDAFSDE 122 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTTSHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh----cCCceEEEECCCCCHH
Confidence 47899999999999999999999 9999999887655422 11122222 2446788999999999
Q ss_pred HHHHHHccC-----CCcEEEEcccccc-------------CC-------------------------ccccCcchhhhhh
Q 040584 69 ALEVVFAGT-----KFDAVIHFAGLKA-------------VG-------------------------ESVQKPLPYFDNN 105 (347)
Q Consensus 69 ~~~~~~~~~-----~~d~vih~a~~~~-------------~~-------------------------~~~~~~~~~~~~n 105 (347)
++.++++.. ++|++|||||... .. .+.+.+...+++|
T Consensus 123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn 202 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence 988877532 6999999999641 11 1223345567778
Q ss_pred hhHHH-HHHHHHHHcC----CCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--C-CceEE
Q 040584 106 LTGTI-TLLEVMAAHG----CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--S-EWKII 177 (347)
Q Consensus 106 v~~~~-~l~~~~~~~~----~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~-~~~~~ 177 (347)
..++. .+++++.... -.++|++||....-. .|......|+.||.+.+.+.+.++.++ . ++++.
T Consensus 203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~---------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVN 273 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT---------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDAR 273 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG---------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEE
T ss_pred chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc---------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEE
Confidence 77766 5666554322 248999999765310 122223789999999999999998886 4 78999
Q ss_pred EeecccccCC
Q 040584 178 LLRYFNPVGA 187 (347)
Q Consensus 178 ~lR~~~v~G~ 187 (347)
++-||.+--+
T Consensus 274 aVaPG~i~T~ 283 (405)
T 3zu3_A 274 VSVLKAVVSQ 283 (405)
T ss_dssp EEECCCCCCH
T ss_pred EEEeCCCcCc
Confidence 9999887654
No 308
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.63 E-value=7.9e-15 Score=153.56 Aligned_cols=172 Identities=19% Similarity=0.172 Sum_probs=129.1
Q ss_pred CceEEEEcCCCc-ccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc---
Q 040584 2 AKNILVIGGVGY-IGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG--- 76 (347)
Q Consensus 2 ~~~vlItGatG~-iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 76 (347)
+|+++||||+|+ ||.++++.|+++|+.|+++ .|+........+.+....+..+.++.++.+|++|.+++.++++.
T Consensus 675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~ 754 (1887)
T 2uv8_A 675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD 754 (1887)
T ss_dssp TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 378999999998 9999999999999999988 46555554444444332222245688899999999999887752
Q ss_pred ------C--CCcEEEEccccccCC-cc------ccCcchhhhhhhhHHHHHHHHHHHcC------CCeEEEeccccccCC
Q 040584 77 ------T--KFDAVIHFAGLKAVG-ES------VQKPLPYFDNNLTGTITLLEVMAAHG------CKNLVFSSSATAYGW 135 (347)
Q Consensus 77 ------~--~~d~vih~a~~~~~~-~~------~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~iv~~SS~~~yg~ 135 (347)
+ ++|+||||||..... .. .+.+...+++|+.++..++++++... .++||++||...+.
T Consensus 755 ~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~- 833 (1887)
T 2uv8_A 755 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF- 833 (1887)
T ss_dssp CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCS-
T ss_pred hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhcc-
Confidence 2 499999999976443 22 23346789999999999999875432 25899999976541
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHH-HHHHhhhcC-CceEEEeecccccC
Q 040584 136 PKVVPCTEEFPLQAMNPYGRSKLFIEEI-CRDVHRSDS-EWKIILLRYFNPVG 186 (347)
Q Consensus 136 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~-~~~~~~lR~~~v~G 186 (347)
+ ....|+.||.+.+.+ .+.++.+.. .+.++++.||.+-+
T Consensus 834 ----------g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 834 ----------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp ----------S--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred ----------C--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 1 345799999999998 666666542 38999999999874
No 309
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.60 E-value=1.6e-14 Score=150.89 Aligned_cols=171 Identities=18% Similarity=0.144 Sum_probs=125.2
Q ss_pred CceEEEEcCCCc-ccHHHHHHHHhCCCeEEEEe-CCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc---
Q 040584 2 AKNILVIGGVGY-IGSHTVLQLLLGGYKTVVVD-NLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG--- 76 (347)
Q Consensus 2 ~~~vlItGatG~-iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 76 (347)
+++++||||+|. ||.++++.|+++|++|++++ |+........+.+.......+.++.++.+|++|.+++.++++.
T Consensus 652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~ 731 (1878)
T 2uv9_A 652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYD 731 (1878)
T ss_dssp TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 378999999999 99999999999999999885 5444443333444222222245688899999999999888752
Q ss_pred ----C--CCcEEEEccccccCC-cc------ccCcchhhhhhhhHHHHHHHHHHHc------CCCeEEEeccccccCCCC
Q 040584 77 ----T--KFDAVIHFAGLKAVG-ES------VQKPLPYFDNNLTGTITLLEVMAAH------GCKNLVFSSSATAYGWPK 137 (347)
Q Consensus 77 ----~--~~d~vih~a~~~~~~-~~------~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~iv~~SS~~~yg~~~ 137 (347)
+ ++|+||||||..... .. .+.+...+++|+.++..++++++.. +.++||++||...+.
T Consensus 732 ~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~--- 808 (1878)
T 2uv9_A 732 TKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF--- 808 (1878)
T ss_dssp SSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS---
T ss_pred hhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc---
Confidence 3 489999999976443 22 2344678999999999888774322 225899999976531
Q ss_pred CCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhh-c-CCceEEEeeccccc
Q 040584 138 VVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRS-D-SEWKIILLRYFNPV 185 (347)
Q Consensus 138 ~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~-~~~~~~~lR~~~v~ 185 (347)
+ ....|+.+|.+.+.+++.+..+ . ..++++++.||.+-
T Consensus 809 --------g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 809 --------G--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp --------S--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred --------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 1 2468999999999998765443 2 23899999999876
No 310
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.8e-15 Score=153.60 Aligned_cols=172 Identities=19% Similarity=0.170 Sum_probs=123.9
Q ss_pred CceEEEEcCCCc-ccHHHHHHHHhCCCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc---
Q 040584 2 AKNILVIGGVGY-IGSHTVLQLLLGGYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG--- 76 (347)
Q Consensus 2 ~~~vlItGatG~-iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 76 (347)
+|+++||||+|+ ||+++++.|+++|++|+++ .|+........+.+....+..+.++.++.+|++|.+++.++++.
T Consensus 476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e 555 (1688)
T 2pff_A 476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD 555 (1688)
T ss_dssp SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHS
T ss_pred CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 378999999998 9999999999999999988 56555444333333221111234678899999999998887752
Q ss_pred ------C--CCcEEEEccccccCC-cc------ccCcchhhhhhhhHHHHHHHHHHHc------CCCeEEEeccccccCC
Q 040584 77 ------T--KFDAVIHFAGLKAVG-ES------VQKPLPYFDNNLTGTITLLEVMAAH------GCKNLVFSSSATAYGW 135 (347)
Q Consensus 77 ------~--~~d~vih~a~~~~~~-~~------~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~iv~~SS~~~yg~ 135 (347)
+ ++|+||||||..... .. .+.+...+++|+.++..++++++.. +.++||++||...+.
T Consensus 556 ~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~- 634 (1688)
T 2pff_A 556 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF- 634 (1688)
T ss_dssp CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTS-
T ss_pred hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhcc-
Confidence 2 499999999975443 21 2334678999999999999887432 124899999976531
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHH-HHHHhhhc-CCceEEEeecccccC
Q 040584 136 PKVVPCTEEFPLQAMNPYGRSKLFIEEI-CRDVHRSD-SEWKIILLRYFNPVG 186 (347)
Q Consensus 136 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~-~~~~~~~lR~~~v~G 186 (347)
+ ....|+.||.+.+.+ .+.++.+. ..++++++.||.+-|
T Consensus 635 ----------G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 635 ----------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp ----------S--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred ----------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 1 346899999999998 44444443 237888888888764
No 311
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.58 E-value=1.1e-14 Score=145.14 Aligned_cols=167 Identities=23% Similarity=0.323 Sum_probs=129.4
Q ss_pred CceEEEEcCCCcccHHHHHHHH-hCCC-eEEEEeCCCch---hHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLL-LGGY-KTVVVDNLDNA---SEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~-~~g~-~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
+++++||||+|.||+.+++.|+ ++|+ .|++++|+... .....+++... +.++.++.+|++|.+++.+++++
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~----G~~v~~~~~Dvsd~~~v~~~~~~ 605 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY----GAEVSLQACDVADRETLAKVLAS 605 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHT
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc----CCcEEEEEeecCCHHHHHHHHHH
Confidence 5789999999999999999999 7898 48888888433 33334444332 45788999999999999999875
Q ss_pred C----CCcEEEEccccccCCc----cccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCC
Q 040584 77 T----KFDAVIHFAGLKAVGE----SVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQ 148 (347)
Q Consensus 77 ~----~~d~vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~ 148 (347)
. .+|+||||||...... +.+.+...+++|+.|+.++.+++.. .. +||++||...+- +..
T Consensus 606 ~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~-----------g~~ 672 (795)
T 3slk_A 606 IPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVL-----------GSG 672 (795)
T ss_dssp SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHH-----------TCS
T ss_pred HHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcC-----------CCC
Confidence 3 5899999999765432 3345667889999999999998732 34 899999987641 233
Q ss_pred CCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCC
Q 040584 149 AMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGA 187 (347)
Q Consensus 149 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~ 187 (347)
....|+.+|...+.+.+++... |++++++-||.+-.+
T Consensus 673 g~~~YaAaka~~~alA~~~~~~--Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 673 GQGNYAAANSFLDALAQQRQSR--GLPTRSLAWGPWAEH 709 (795)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECCCSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHc--CCeEEEEECCeECcc
Confidence 4568999999888888877654 999999999876643
No 312
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=99.58 E-value=8.3e-15 Score=133.50 Aligned_cols=173 Identities=16% Similarity=0.022 Sum_probs=121.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHh-CCCeEEEEeCCCchhHH------------HHHHHHHhhccCCCCeEEEecCCCCHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLL-GGYKTVVVDNLDNASEI------------AVAKVKELAGYQGNNMTFHKLDLRDKA 68 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 68 (347)
.|++|||||++.||.++++.|++ .|+.|++++|....... ..+.+.. .+.++..+.+|++|.+
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~----~G~~a~~i~~Dvtd~~ 136 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA----AGLYSKSINGDAFSDA 136 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----TTCCEEEEESCTTSHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh----cCCcEEEEEecCCCHH
Confidence 57899999999999999999999 99999999887654321 1122222 2456788999999999
Q ss_pred HHHHHHcc----C--CCcEEEEccccc-------------cCCc-------------------------cccCcchhhhh
Q 040584 69 ALEVVFAG----T--KFDAVIHFAGLK-------------AVGE-------------------------SVQKPLPYFDN 104 (347)
Q Consensus 69 ~~~~~~~~----~--~~d~vih~a~~~-------------~~~~-------------------------~~~~~~~~~~~ 104 (347)
+++++++. + ++|+||||||.. ...+ +.+.+...+++
T Consensus 137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V 216 (422)
T 3s8m_A 137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV 216 (422)
T ss_dssp HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence 88876642 2 699999999862 1111 12223345555
Q ss_pred hhhHHH-HHHHHHHHcC----CCeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhc--CCceEE
Q 040584 105 NLTGTI-TLLEVMAAHG----CKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSD--SEWKII 177 (347)
Q Consensus 105 nv~~~~-~l~~~~~~~~----~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ 177 (347)
|..+.. .+++++.... -.+||++||....-. .|......|+.||.+.+.+.+.++.+. .++++.
T Consensus 217 n~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~---------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVN 287 (422)
T 3s8m_A 217 MGGQDWELWIDALEGAGVLADGARSVAFSYIGTEIT---------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGAN 287 (422)
T ss_dssp HSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG---------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred hchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc---------CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEE
Confidence 665554 5666654432 248999999765310 011122679999999999999888775 479999
Q ss_pred EeecccccCC
Q 040584 178 LLRYFNPVGA 187 (347)
Q Consensus 178 ~lR~~~v~G~ 187 (347)
++.||.+--+
T Consensus 288 aVaPG~i~T~ 297 (422)
T 3s8m_A 288 VAVLKSVVTQ 297 (422)
T ss_dssp EEEECCCCCT
T ss_pred EEEcCCCcCh
Confidence 9999987765
No 313
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=99.55 E-value=2.5e-14 Score=131.40 Aligned_cols=175 Identities=13% Similarity=-0.003 Sum_probs=120.0
Q ss_pred CceEEEEcCCCcccHH--HHHHHHhCCCeEEEEeCCCchhHH--------HHHHHHHhhccCCCCeEEEecCCCCHHHHH
Q 040584 2 AKNILVIGGVGYIGSH--TVLQLLLGGYKTVVVDNLDNASEI--------AVAKVKELAGYQGNNMTFHKLDLRDKAALE 71 (347)
Q Consensus 2 ~~~vlItGatG~iG~~--l~~~L~~~g~~v~~~~r~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (347)
+|+++||||++.||.+ +++.|++.|+.|++++|....... ..+.+.+.....+.++..+.+|++|.++++
T Consensus 60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~ 139 (418)
T 4eue_A 60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD 139 (418)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence 4789999999999999 999999999999999886554210 011122121122457888999999999888
Q ss_pred HHHccC-----CCcEEEEcccccc-------------CCc-------------------------cccCcchhhhhhhhH
Q 040584 72 VVFAGT-----KFDAVIHFAGLKA-------------VGE-------------------------SVQKPLPYFDNNLTG 108 (347)
Q Consensus 72 ~~~~~~-----~~d~vih~a~~~~-------------~~~-------------------------~~~~~~~~~~~nv~~ 108 (347)
++++.. ++|++|||||... ..+ ..+.+...+++|..+
T Consensus 140 ~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~ 219 (418)
T 4eue_A 140 KVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE 219 (418)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence 877532 6999999999641 001 112223355555555
Q ss_pred HH-HHHHHHHHcC----CCeEEEeccccccCCCCCCCCCCCCCCCCC--CchhhhHHHHHHHHHHHhhhcC---CceEEE
Q 040584 109 TI-TLLEVMAAHG----CKNLVFSSSATAYGWPKVVPCTEEFPLQAM--NPYGRSKLFIEEICRDVHRSDS---EWKIIL 178 (347)
Q Consensus 109 ~~-~l~~~~~~~~----~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~ 178 (347)
.. .++.++.... -.++|++||....- +.... ..|+.||.+.+.+.+.++.+.. ++++.+
T Consensus 220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~-----------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~ 288 (418)
T 4eue_A 220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPR-----------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFV 288 (418)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEECCCCGG-----------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHHHhhhcCCcEEEEEeCchhcC-----------CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence 44 4555554432 24899999976431 22233 7899999999999998887752 689999
Q ss_pred eecccccCC
Q 040584 179 LRYFNPVGA 187 (347)
Q Consensus 179 lR~~~v~G~ 187 (347)
+-||.+--+
T Consensus 289 V~PG~v~T~ 297 (418)
T 4eue_A 289 SVNKALVTK 297 (418)
T ss_dssp EECCCCCCH
T ss_pred EECCcCcCh
Confidence 999887654
No 314
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.39 E-value=2.3e-12 Score=141.56 Aligned_cols=169 Identities=16% Similarity=0.154 Sum_probs=121.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCe-EEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC---
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYK-TVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT--- 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (347)
+++++||||+|.||..+++.|+++|+. |++++|+..+.+...+.+..+.. .+.++..+.+|++|.+++.++++..
T Consensus 1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR-QGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH-TTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh-CCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 478999999999999999999999997 77788876654333222332211 2446788899999999988877532
Q ss_pred -CCcEEEEccccccCC----ccccCcchhhhhhhhHHHHHHHHHHHc--CCCeEEEeccccccCCCCCCCCCCCCCCCCC
Q 040584 78 -KFDAVIHFAGLKAVG----ESVQKPLPYFDNNLTGTITLLEVMAAH--GCKNLVFSSSATAYGWPKVVPCTEEFPLQAM 150 (347)
Q Consensus 78 -~~d~vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~ 150 (347)
.+|+|||+||..... .+.+.+...+++|+.|+.++.+++... ..++||++||....- +....
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~-----------g~~g~ 2031 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR-----------GNAGQ 2031 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT-----------TCTTC
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC-----------CCCCc
Confidence 699999999975422 245567789999999999998887654 346999999976541 22334
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCceEEEeecccc
Q 040584 151 NPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNP 184 (347)
Q Consensus 151 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v 184 (347)
..|+.+|...+.+.+....+ |++...+-.+.+
T Consensus 2032 ~~Y~aaKaal~~l~~~rr~~--Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2032 ANYGFANSAMERICEKRRHD--GLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--TSCCCEEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHC--CCcEEEEEccCc
Confidence 67999999999999866554 888888777654
No 315
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=99.36 E-value=3.2e-12 Score=96.77 Aligned_cols=96 Identities=27% Similarity=0.303 Sum_probs=76.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|+|+|+|+|+ |++|+.+++.|.+.| ++|++++|++.+.+... ..++..+.+|+.+.+.+.++++ ++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~--~~ 70 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----------RMGVATKQVDAKDEAGLAKALG--GF 70 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----------TTTCEEEECCTTCHHHHHHHTT--TC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----------hCCCcEEEecCCCHHHHHHHHc--CC
Confidence 5789999999 999999999999999 99999998755433221 2367788999999999999988 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEe
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFS 127 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~ 127 (347)
|+|||+++.. ....+++++.+.+++++...
T Consensus 71 d~vi~~~~~~------------------~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 71 DAVISAAPFF------------------LTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp SEEEECSCGG------------------GHHHHHHHHHHTTCEEECCC
T ss_pred CEEEECCCch------------------hhHHHHHHHHHhCCCEEEec
Confidence 9999998532 13478888998888555433
No 316
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.24 E-value=2.1e-10 Score=126.26 Aligned_cols=173 Identities=11% Similarity=0.033 Sum_probs=117.5
Q ss_pred CceEEEEcCCCc-ccHHHHHHHHhCCCeEEEEeCCCchh-HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc---
Q 040584 2 AKNILVIGGVGY-IGSHTVLQLLLGGYKTVVVDNLDNAS-EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG--- 76 (347)
Q Consensus 2 ~~~vlItGatG~-iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 76 (347)
+|+++||||++. ||.++++.|++.|+.|++++|+.... ....+.+.......+.++..+.+|++|.+++.++++.
T Consensus 2136 gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~ 2215 (3089)
T 3zen_D 2136 DEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGT 2215 (3089)
T ss_dssp CCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTS
T ss_pred CCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence 578999999999 99999999999999999999877651 1112222222222344677889999999998887542
Q ss_pred ------CCCcEEEEcccc----ccCC-----ccccCcchh----hhhhhhHHHHHHHHHHH----cCCC---eEEEeccc
Q 040584 77 ------TKFDAVIHFAGL----KAVG-----ESVQKPLPY----FDNNLTGTITLLEVMAA----HGCK---NLVFSSSA 130 (347)
Q Consensus 77 ------~~~d~vih~a~~----~~~~-----~~~~~~~~~----~~~nv~~~~~l~~~~~~----~~~~---~iv~~SS~ 130 (347)
-++|++|||||. .... ...+++... +++|+.++..++.++.. .+.. .+|..+|.
T Consensus 2216 ~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss 2295 (3089)
T 3zen_D 2216 EQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSP 2295 (3089)
T ss_dssp CCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECS
T ss_pred hhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCc
Confidence 158999999997 2111 122233333 78899998888776553 2221 22222221
Q ss_pred cccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhh--c-CCceEEEeecccccC
Q 040584 131 TAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRS--D-SEWKIILLRYFNPVG 186 (347)
Q Consensus 131 ~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~-~~~~~~~lR~~~v~G 186 (347)
. .+ .......|+.||.+.+.+.+.++.+ . .++.++.+.||.+-+
T Consensus 2296 ~-~g-----------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~t 2342 (3089)
T 3zen_D 2296 N-RG-----------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKG 2342 (3089)
T ss_dssp S-TT-----------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEEC
T ss_pred c-cc-----------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCC
Confidence 1 11 1112347999999999999999988 3 467888888887764
No 317
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=99.20 E-value=1.5e-11 Score=110.13 Aligned_cols=168 Identities=11% Similarity=0.048 Sum_probs=110.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-------eEEEEeCC----CchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-------KTVVVDNL----DNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALE 71 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (347)
|||+||||+||+|++++..|+.+|+ +|.++++. ..+.+.....+.+. .. .. ..|+....++.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~---~~-~~---~~~i~~~~~~~ 78 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC---AF-PL---LAGMTAHADPM 78 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT---TC-TT---EEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh---cc-cc---cCcEEEecCcH
Confidence 6999999999999999999999885 78888776 22222212222221 00 11 13444445677
Q ss_pred HHHccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-CC-eEEEecccc-c--cCCCCCCCCCCCC-
Q 040584 72 VVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-CK-NLVFSSSAT-A--YGWPKVVPCTEEF- 145 (347)
Q Consensus 72 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~iv~~SS~~-~--yg~~~~~~~~e~~- 145 (347)
++++ ++|+|||+||.... ......+++..|+..++++++++.+.. .. +||++|.-. + |-.. +..
T Consensus 79 ~al~--~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~------~~~~ 148 (329)
T 1b8p_A 79 TAFK--DADVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAM------KSAP 148 (329)
T ss_dssp HHTT--TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH------HTCT
T ss_pred HHhC--CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHH------HHcC
Confidence 8888 69999999996542 223445678899999999999999884 55 899988722 1 0000 001
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeecccccCCC
Q 040584 146 PLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH 188 (347)
Q Consensus 146 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~ 188 (347)
..++...++.++....++...+++.. +++...++..+|+|-|
T Consensus 149 ~~p~~~v~g~t~Ld~~r~~~~la~~l-gv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 149 SLPAKNFTAMLRLDHNRALSQIAAKT-GKPVSSIEKLFVWGNH 190 (329)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHH-TCCGGGEESCEEEBCS
T ss_pred CCCHHHEEEeecHHHHHHHHHHHHHh-CcCHHHceEEEEEecc
Confidence 12233458888777777777777665 6666666666678854
No 318
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=99.13 E-value=5.6e-10 Score=99.76 Aligned_cols=117 Identities=17% Similarity=0.146 Sum_probs=83.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
+|||+|+||+||+|..++..|+++| ++|+++++.+. ......+.+. .....+ .+ +.+.+++.++++ ++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~----~~~~~v-~~-~~~t~d~~~al~--ga 77 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHM----DTGAVV-RG-FLGQQQLEAALT--GM 77 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTS----CSSCEE-EE-EESHHHHHHHHT--TC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcc----cccceE-EE-EeCCCCHHHHcC--CC
Confidence 5799999999999999999999998 89999987654 1111112211 011111 11 234567888888 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSA 130 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~ 130 (347)
|+|||+||..... .....+++..|+.+++++++++.+.+.+.+|+++|.
T Consensus 78 DvVi~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 78 DLIIVPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp SEEEECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred CEEEEcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 9999999965421 223456789999999999999999887777777763
No 319
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=99.08 E-value=5.1e-10 Score=99.49 Aligned_cols=172 Identities=13% Similarity=0.063 Sum_probs=100.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeC--CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDN--LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|||+||||+||+|++++..|+.+|. ++.++++ ...+.+.....+.+.....+..+.+...+ +++.++++ +
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~--g 74 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIID--E 74 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGT--T
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhC--C
Confidence 5899999999999999999999885 5777776 32222221222222211111223332221 12455677 6
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCCCCCCCCCCCCCCCCCCchhh-hH
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGR-SK 157 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~-sK 157 (347)
+|+|||+||.... ......++++.|+.+++++++++++.+ +++|+++|.=+--... ........++...+|. +.
T Consensus 75 aD~Vi~~Ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~--~~~k~~~~p~~rviG~gt~ 149 (313)
T 1hye_A 75 SDVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTY--KALVDSKFERNQVFGLGTH 149 (313)
T ss_dssp CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHH--HHHHHHCCCTTSEEECTTH
T ss_pred CCEEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHH--HHHHhhCcChhcEEEeCcc
Confidence 9999999996542 122345678999999999999999988 8777777743210000 0000012344455666 55
Q ss_pred HHHHHHHHHHhhhcCCceEEEeecccccCC
Q 040584 158 LFIEEICRDVHRSDSEWKIILLRYFNPVGA 187 (347)
Q Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~ 187 (347)
....++...+++.. +++...++. .++|-
T Consensus 150 LD~~r~~~~la~~l-gv~~~~v~~-~v~G~ 177 (313)
T 1hye_A 150 LDSLRFKVAIAKFF-GVHIDEVRT-RIIGE 177 (313)
T ss_dssp HHHHHHHHHHHHHH-TCCGGGEEC-CEEEC
T ss_pred HHHHHHHHHHHHHh-CcCHHHeEE-EEeec
Confidence 54555555555543 444333443 55653
No 320
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.99 E-value=3.1e-09 Score=93.99 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=78.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeC--CCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDN--LDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|||+||||+|++|++++..|+.+|+ ++.++++ ...+.+.....+.+... ....+.+.. + + .++++ +
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~-~--~----~~a~~--~ 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQ-G--G----YEDTA--G 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEE-C--C----GGGGT--T
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEe-C--C----HHHhC--C
Confidence 6899999999999999999999886 6777776 33222221222222211 122333333 2 2 33466 6
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccc
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSA 130 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~ 130 (347)
+|+|||+||..... .....+++..|+.+++++++++++.+...+|+++|.
T Consensus 71 aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 71 SDVVVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred CCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 99999999965321 223346789999999999999999877777777764
No 321
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=98.95 E-value=8.7e-10 Score=96.97 Aligned_cols=81 Identities=16% Similarity=0.185 Sum_probs=66.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++++||||+|++|+++++.|++.|++|++++|+..+.+...+.+... .++.++.+|++|.+++.++++ .+|+
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~--~~Dv 191 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-----FKVNVTAAETADDASRAEAVK--GAHF 191 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----HTCCCEEEECCSHHHHHHHTT--TCSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEecCCCHHHHHHHHH--hCCE
Confidence 478999999999999999999999999999999866655554444321 135667889999999999998 5899
Q ss_pred EEEccccc
Q 040584 82 VIHFAGLK 89 (347)
Q Consensus 82 vih~a~~~ 89 (347)
|||+|+..
T Consensus 192 lVn~ag~g 199 (287)
T 1lu9_A 192 VFTAGAIG 199 (287)
T ss_dssp EEECCCTT
T ss_pred EEECCCcc
Confidence 99999853
No 322
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.89 E-value=1.1e-08 Score=94.29 Aligned_cols=102 Identities=14% Similarity=0.176 Sum_probs=77.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC---CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG---YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|++|+|+|| |++|+.+++.|++.| .+|++.+|+..+.+...+.+.... +.++..+.+|+.|.+++.+++++.+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~---~~~~~~~~~D~~d~~~l~~~l~~~~ 76 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG---YGEIDITTVDADSIEELVALINEVK 76 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT---CCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc---CCceEEEEecCCCHHHHHHHHHhhC
Confidence 478999998 999999999999998 389999998777665555544321 2367889999999999999998545
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEE
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVF 126 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~ 126 (347)
+|+|||++++.. ...++++|.+.++ +++-
T Consensus 77 ~DvVin~ag~~~------------------~~~v~~a~l~~g~-~vvD 105 (405)
T 4ina_A 77 PQIVLNIALPYQ------------------DLTIMEACLRTGV-PYLD 105 (405)
T ss_dssp CSEEEECSCGGG------------------HHHHHHHHHHHTC-CEEE
T ss_pred CCEEEECCCccc------------------ChHHHHHHHHhCC-CEEE
Confidence 899999997531 1256777877776 4443
No 323
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.84 E-value=2.8e-08 Score=77.45 Aligned_cols=99 Identities=19% Similarity=0.161 Sum_probs=70.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
|++|+|+|+ |.+|+.+++.|.++|++|+++++++...+... . .+..++.+|.++++.+.++--. ++|+
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~------~~~~~~~gd~~~~~~l~~~~~~-~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----D------EGFDAVIADPTDESFYRSLDLE-GVSA 73 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H------TTCEEEECCTTCHHHHHHSCCT-TCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----H------CCCcEEECCCCCHHHHHhCCcc-cCCE
Confidence 468999996 99999999999999999999998755433222 1 2567889999999988876322 6899
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
||.+.+. .+.|+ .++..+++.+..++|...+
T Consensus 74 vi~~~~~-------------~~~n~----~~~~~a~~~~~~~iia~~~ 104 (141)
T 3llv_A 74 VLITGSD-------------DEFNL----KILKALRSVSDVYAIVRVS 104 (141)
T ss_dssp EEECCSC-------------HHHHH----HHHHHHHHHCCCCEEEEES
T ss_pred EEEecCC-------------HHHHH----HHHHHHHHhCCceEEEEEc
Confidence 9988651 12233 4555666666556655443
No 324
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=98.83 E-value=5.1e-08 Score=87.36 Aligned_cols=170 Identities=17% Similarity=0.097 Sum_probs=107.2
Q ss_pred ceEEEEcCCCcccHHHHHHHH-hCCCeEEEEeCCCchhH------------HHHHHHHHhhccCCCCeEEEecCCCCHHH
Q 040584 3 KNILVIGGVGYIGSHTVLQLL-LGGYKTVVVDNLDNASE------------IAVAKVKELAGYQGNNMTFHKLDLRDKAA 69 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~-~~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (347)
|++|||||+..+|.+.+..|+ +.|..|+++.+.....+ ...+.+.+. +.+...+.+|+++.+.
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~----G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE----GLYSVTIDGDAFSDEI 126 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH----TCCEEEEESCTTSHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc----CCCceeEeCCCCCHHH
Confidence 789999999999999999998 67999998887654321 112223332 5578899999999999
Q ss_pred HHHHHccC-----CCcEEEEccccccCCc--------cc-----c--------Ccch---------hhhhhhhHHH----
Q 040584 70 LEVVFAGT-----KFDAVIHFAGLKAVGE--------SV-----Q--------KPLP---------YFDNNLTGTI---- 110 (347)
Q Consensus 70 ~~~~~~~~-----~~d~vih~a~~~~~~~--------~~-----~--------~~~~---------~~~~nv~~~~---- 110 (347)
++++++.. ++|+|||++|...... +. + .... .-+.++.++.
T Consensus 127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg 206 (401)
T 4ggo_A 127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG 206 (401)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence 88887643 7999999999653110 00 0 0000 0001122222
Q ss_pred -----HHHHHHHHcCC----CeEEEeccccccCCCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhhhcCCceEEEeec
Q 040584 111 -----TLLEVMAAHGC----KNLVFSSSATAYGWPKVVPCTEEFPLQAMNPYGRSKLFIEEICRDVHRSDSEWKIILLRY 181 (347)
Q Consensus 111 -----~l~~~~~~~~~----~~iv~~SS~~~yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~ 181 (347)
.++.+....++ .++|..|+.+.-- ..|.-....+|.+|..+|..++.++.+..+..+.+.-+
T Consensus 207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse~---------t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~ 277 (401)
T 4ggo_A 207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPEA---------TQALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVN 277 (401)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG---------GHHHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred hhHHHHHHHHHHhhhcccCCceEEEEeccCcce---------eecCCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence 23444444332 3777777644210 00111224689999999999999998886666666555
Q ss_pred cccc
Q 040584 182 FNPV 185 (347)
Q Consensus 182 ~~v~ 185 (347)
+.+-
T Consensus 278 ~a~v 281 (401)
T 4ggo_A 278 KGLV 281 (401)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 5443
No 325
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.83 E-value=9.5e-09 Score=80.18 Aligned_cols=101 Identities=17% Similarity=0.159 Sum_probs=71.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d 80 (347)
+++|+|+|+ |.+|+.+++.|.+.|++|++++|++...+ .+. ......+.+|..+.+.+.++ +. ++|
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~----~~~------~~~~~~~~~d~~~~~~l~~~~~~--~~d 72 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN----AYA------SYATHAVIANATEENELLSLGIR--NFE 72 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH----TTT------TTCSEEEECCTTCHHHHHTTTGG--GCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHH------HhCCEEEEeCCCCHHHHHhcCCC--CCC
Confidence 357999997 99999999999999999999988643321 111 12346678999998877765 55 599
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
+||++++.. .+.|. .++..+++.+.+++|..++..
T Consensus 73 ~vi~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~~~ 107 (144)
T 2hmt_A 73 YVIVAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQNY 107 (144)
T ss_dssp EEEECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECCSH
T ss_pred EEEECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeCCH
Confidence 999998631 11232 456677777777777666543
No 326
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.73 E-value=1.3e-07 Score=73.28 Aligned_cols=97 Identities=18% Similarity=0.137 Sum_probs=68.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~ 81 (347)
|+|+|+|+ |++|+.+++.|.+.|++|++++|++...+. +... .++..+.+|..+.+.+.+. ++ ++|+
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~----~~~~-----~~~~~~~~d~~~~~~l~~~~~~--~~d~ 72 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK----ASAE-----IDALVINGDCTKIKTLEDAGIE--DADM 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHH-----CSSEEEESCTTSHHHHHHTTTT--TCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHHh-----cCcEEEEcCCCCHHHHHHcCcc--cCCE
Confidence 78999996 999999999999999999999886543322 2111 1456778899888877655 44 6899
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEec
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSS 128 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~S 128 (347)
||++.+.. ..|. .+.+.++..+.+++|..+
T Consensus 73 vi~~~~~~-------------~~~~----~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 73 YIAVTGKE-------------EVNL----MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp EEECCSCH-------------HHHH----HHHHHHHHTTCCCEEEEC
T ss_pred EEEeeCCc-------------hHHH----HHHHHHHHcCCCEEEEEe
Confidence 99996421 1222 455667777766777544
No 327
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.66 E-value=1e-07 Score=86.65 Aligned_cols=93 Identities=20% Similarity=0.179 Sum_probs=72.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|||+|+|| |++|+.+++.|.+ .++|.+.+++....+. + ...+..+..|+.|.+++.++++ ++|+
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~----~-------~~~~~~~~~d~~d~~~l~~~~~--~~Dv 80 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK----V-------KEFATPLKVDASNFDKLVEVMK--EFEL 80 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH----H-------TTTSEEEECCTTCHHHHHHHHT--TCSE
T ss_pred ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH----H-------hccCCcEEEecCCHHHHHHHHh--CCCE
Confidence 478999998 9999999998865 5899998887544332 1 2356778899999999999998 5899
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEec
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSS 128 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~S 128 (347)
||+++++.. -..++++|.+.|+ ++|=+|
T Consensus 81 Vi~~~p~~~------------------~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 81 VIGALPGFL------------------GFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp EEECCCGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred EEEecCCcc------------------cchHHHHHHhcCc-ceEeee
Confidence 999986431 1257889998887 777655
No 328
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.66 E-value=3.3e-08 Score=92.12 Aligned_cols=106 Identities=22% Similarity=0.202 Sum_probs=74.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++|+|+| +|++|+++++.|++.|++|++++|+..+..... .. -.++..+.+|+.|.+++.++++ ++|+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la----~~----~~~~~~~~~Dv~d~~~l~~~l~--~~Dv 71 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLS----AG----VQHSTPISLDVNDDAALDAEVA--KHDL 71 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTT----TT----CTTEEEEECCTTCHHHHHHHHT--TSSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHH----Hh----cCCceEEEeecCCHHHHHHHHc--CCcE
Confidence 47899998 899999999999999999999998754332211 10 1246678899999999999998 6999
Q ss_pred EEEccccccCCccccCcchhhh--hh-------hhHHHHHHHHHHHcCC
Q 040584 82 VIHFAGLKAVGESVQKPLPYFD--NN-------LTGTITLLEVMAAHGC 121 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~--~n-------v~~~~~l~~~~~~~~~ 121 (347)
|||+++...... .....++ .| ...+..++++|++.|+
T Consensus 72 VIn~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv 117 (450)
T 1ff9_A 72 VISLIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI 117 (450)
T ss_dssp EEECCC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC
T ss_pred EEECCccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC
Confidence 999998643211 0011111 11 2356788999999887
No 329
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.53 E-value=2.3e-06 Score=67.46 Aligned_cols=76 Identities=21% Similarity=0.331 Sum_probs=58.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCc-hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDN-ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~ 79 (347)
.++|+|+|+ |.+|+.+++.|.+.|++|+++++++. ..+...+.. ..++..+.+|.+|.+.+.++ ++ ++
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-------~~~~~~i~gd~~~~~~l~~a~i~--~a 72 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-------GDNADVIPGDSNDSSVLKKAGID--RC 72 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-------CTTCEEEESCTTSHHHHHHHTTT--TC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-------cCCCeEEEcCCCCHHHHHHcChh--hC
Confidence 368999995 99999999999999999999998642 221111111 23678899999999998887 66 68
Q ss_pred cEEEEccc
Q 040584 80 DAVIHFAG 87 (347)
Q Consensus 80 d~vih~a~ 87 (347)
|.||-+.+
T Consensus 73 d~vi~~~~ 80 (153)
T 1id1_A 73 RAILALSD 80 (153)
T ss_dssp SEEEECSS
T ss_pred CEEEEecC
Confidence 99998864
No 330
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.53 E-value=4e-07 Score=80.71 Aligned_cols=115 Identities=19% Similarity=0.129 Sum_probs=78.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||.|+||+|++|..++..|++.| .+|.++++.+ .+.....+.+.. ....+.... ..++++++++ ++|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~--~~~~l~~~~----~t~d~~~a~~--~aD 70 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE--TRATVKGYL----GPEQLPDCLK--GCD 70 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS--SSCEEEEEE----SGGGHHHHHT--TCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC--cCceEEEec----CCCCHHHHhC--CCC
Confidence 589999999999999999999988 7999999876 222222222210 011111111 1245677787 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+||++||..... .....+.+..|+..++.+++.+.+.... ++|++|.
T Consensus 71 vVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 71 VVVIPAGVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp EEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EEEECCCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 999999975421 2233567788999999999998887543 7777654
No 331
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=98.50 E-value=1.3e-07 Score=84.34 Aligned_cols=116 Identities=14% Similarity=0.105 Sum_probs=77.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--e-----EEEEeCCCc--hhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--K-----TVVVDNLDN--ASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV 73 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~-----v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (347)
+||+||||+|++|++++..|+..|. + +.++++... ..+-..-.+.+.. .+-...+. ......+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~---~~~~~~~~----~~~~~~~~ 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA---LPLLKDVI----ATDKEEIA 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC---CTTEEEEE----EESCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhh---hcccCCEE----EcCCcHHH
Confidence 6899999999999999999998875 5 888877532 2222222222210 11111111 12234556
Q ss_pred HccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC--eEEEecc
Q 040584 74 FAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK--NLVFSSS 129 (347)
Q Consensus 74 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~iv~~SS 129 (347)
++ ++|+|||+||.... ......+.++.|+..++.+++++++.+.+ +++.+|.
T Consensus 77 ~~--daDvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 77 FK--DLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp TT--TCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred hC--CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 66 69999999986532 22355678899999999999999998754 5777775
No 332
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.45 E-value=8.6e-07 Score=82.77 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=74.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+++|+|+|+ |++|+.+++.|++. |++|++++|+..+.....+. .++..+.+|+.|.+++.++++ ++|
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---------~~~~~~~~D~~d~~~l~~~l~--~~D 90 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---------SGSKAISLDVTDDSALDKVLA--DND 90 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---------GTCEEEECCTTCHHHHHHHHH--TSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---------cCCcEEEEecCCHHHHHHHHc--CCC
Confidence 478999997 99999999999998 78999999875544322211 145677899999999999988 699
Q ss_pred EEEEccccccCCccc----cCcchhhhhhh--hHHHHHHHHHHHcCC
Q 040584 81 AVIHFAGLKAVGESV----QKPLPYFDNNL--TGTITLLEVMAAHGC 121 (347)
Q Consensus 81 ~vih~a~~~~~~~~~----~~~~~~~~~nv--~~~~~l~~~~~~~~~ 121 (347)
+|||+++........ ..-..++..+. ..+..+++.+++.|+
T Consensus 91 vVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv 137 (467)
T 2axq_A 91 VVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI 137 (467)
T ss_dssp EEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred EEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence 999999864211000 00011122221 234677788888776
No 333
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=98.42 E-value=3.7e-07 Score=76.40 Aligned_cols=77 Identities=19% Similarity=0.353 Sum_probs=54.9
Q ss_pred CceEEEEcC----------------CCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCC
Q 040584 2 AKNILVIGG----------------VGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLR 65 (347)
Q Consensus 2 ~~~vlItGa----------------tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (347)
+|+|+|||| +|.+|.+++++|+++|++|+++.|+...... ...++..+ |+.
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-----------~~~~~~~~--~v~ 69 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-----------PHPNLSIR--EIT 69 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-----------CCTTEEEE--ECC
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----------CCCCeEEE--EHh
Confidence 689999999 9999999999999999999999986532110 01244444 455
Q ss_pred CHHHHHHHHcc-C-CCcEEEEccccccC
Q 040584 66 DKAALEVVFAG-T-KFDAVIHFAGLKAV 91 (347)
Q Consensus 66 d~~~~~~~~~~-~-~~d~vih~a~~~~~ 91 (347)
..+++...+.. + ++|++||+||...+
T Consensus 70 s~~em~~~v~~~~~~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 70 NTKDLLIEMQERVQDYQVLIHSMAVSDY 97 (232)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCccccc
Confidence 55555444321 1 59999999997654
No 334
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.41 E-value=1.7e-06 Score=68.42 Aligned_cols=100 Identities=20% Similarity=0.130 Sum_probs=69.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d 80 (347)
+++|+|+|+ |.+|+.+++.|.+.|++|++++|++...+.... ..+...+.+|..+.+.+.++ +. ++|
T Consensus 19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---------~~g~~~~~~d~~~~~~l~~~~~~--~ad 86 (155)
T 2g1u_A 19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---------EFSGFTVVGDAAEFETLKECGME--KAD 86 (155)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---------TCCSEEEESCTTSHHHHHTTTGG--GCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---------cCCCcEEEecCCCHHHHHHcCcc--cCC
Confidence 478999995 999999999999999999999987665432110 12456777898888777665 55 589
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHH-cCCCeEEEeccc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAA-HGCKNLVFSSSA 130 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~iv~~SS~ 130 (347)
+||.+.+.. ..| ..++..++. .+..++|...+.
T Consensus 87 ~Vi~~~~~~-------------~~~----~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 87 MVFAFTNDD-------------STN----FFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp EEEECSSCH-------------HHH----HHHHHHHHHTSCCSEEEEECSS
T ss_pred EEEEEeCCc-------------HHH----HHHHHHHHHHCCCCeEEEEECC
Confidence 999997521 111 245556666 555566655543
No 335
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=98.41 E-value=6e-07 Score=74.98 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=55.2
Q ss_pred CceEEEEcC----------------CCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCC
Q 040584 2 AKNILVIGG----------------VGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLR 65 (347)
Q Consensus 2 ~~~vlItGa----------------tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (347)
+|+|+|||| +|.+|.+++++|+++|++|+++.++..... ..++. ..|+.
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~-------------~~g~~--~~dv~ 72 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-------------PPFVK--RVDVM 72 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-------------CTTEE--EEECC
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc-------------CCCCe--EEccC
Confidence 589999999 799999999999999999999877542110 11333 46788
Q ss_pred CHHHHHHHHcc-C-CCcEEEEccccccC
Q 040584 66 DKAALEVVFAG-T-KFDAVIHFAGLKAV 91 (347)
Q Consensus 66 d~~~~~~~~~~-~-~~d~vih~a~~~~~ 91 (347)
+.+++.+.+.+ + ++|++||+||...+
T Consensus 73 ~~~~~~~~v~~~~~~~Dili~~Aav~d~ 100 (226)
T 1u7z_A 73 TALEMEAAVNASVQQQNIFIGCAAVADY 100 (226)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred cHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence 87766554421 1 59999999997543
No 336
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.29 E-value=5.8e-06 Score=69.26 Aligned_cols=73 Identities=21% Similarity=0.207 Sum_probs=58.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~ 81 (347)
|+|+|+|+ |.+|+++++.|.++|++|+++++++...+...+. .+...+.+|.++.+.+.++ ++ ++|+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---------~~~~~i~gd~~~~~~l~~a~i~--~ad~ 68 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---------LKATIIHGDGSHKEILRDAEVS--KNDV 68 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---------SSSEEEESCTTSHHHHHHHTCC--TTCE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---------cCCeEEEcCCCCHHHHHhcCcc--cCCE
Confidence 58999995 9999999999999999999999875544322211 2567899999999998887 44 6899
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
||-+.+
T Consensus 69 vi~~~~ 74 (218)
T 3l4b_C 69 VVILTP 74 (218)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 997753
No 337
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.29 E-value=3.8e-06 Score=68.31 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=57.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH--HccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV--FAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~~ 78 (347)
+++|+|+| .|.+|..+++.|.+. |++|+++++++.+... +.. .++..+.+|..+.+.+.++ ++ +
T Consensus 39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~----~~~------~g~~~~~gd~~~~~~l~~~~~~~--~ 105 (183)
T 3c85_A 39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQ----HRS------EGRNVISGDATDPDFWERILDTG--H 105 (183)
T ss_dssp TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH----HHH------TTCCEEECCTTCHHHHHTBCSCC--C
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHH----HHH------CCCCEEEcCCCCHHHHHhccCCC--C
Confidence 46899999 699999999999999 9999999987654332 221 2566788999998887776 55 6
Q ss_pred CcEEEEccc
Q 040584 79 FDAVIHFAG 87 (347)
Q Consensus 79 ~d~vih~a~ 87 (347)
+|+||.+.+
T Consensus 106 ad~vi~~~~ 114 (183)
T 3c85_A 106 VKLVLLAMP 114 (183)
T ss_dssp CCEEEECCS
T ss_pred CCEEEEeCC
Confidence 899998864
No 338
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.27 E-value=2.7e-06 Score=66.01 Aligned_cols=74 Identities=15% Similarity=0.164 Sum_probs=59.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKF 79 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~ 79 (347)
|+++|+|+| .|.+|+.+++.|.+.|++|+++++++...+... . .++..+.+|.++.+.+.++ ++ ++
T Consensus 6 ~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~------~g~~~i~gd~~~~~~l~~a~i~--~a 72 (140)
T 3fwz_A 6 ICNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELR----E------RGVRAVLGNAANEEIMQLAHLE--CA 72 (140)
T ss_dssp CCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H------TTCEEEESCTTSHHHHHHTTGG--GC
T ss_pred CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H------cCCCEEECCCCCHHHHHhcCcc--cC
Confidence 567899999 599999999999999999999998765443222 1 2677899999999988876 34 58
Q ss_pred cEEEEccc
Q 040584 80 DAVIHFAG 87 (347)
Q Consensus 80 d~vih~a~ 87 (347)
|+||-+.+
T Consensus 73 d~vi~~~~ 80 (140)
T 3fwz_A 73 KWLILTIP 80 (140)
T ss_dssp SEEEECCS
T ss_pred CEEEEECC
Confidence 99998864
No 339
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.17 E-value=8.3e-06 Score=72.81 Aligned_cols=116 Identities=12% Similarity=0.176 Sum_probs=76.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
++||.|+|++|++|+.++..|+.+| .+|.+++....+.+.....+.+.. ....++.+ ..++.++++ ++
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~~i~~-------t~d~~~al~--dA 77 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGLNLTF-------TSDIKEALT--DA 77 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTCCCEE-------ESCHHHHHT--TE
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCCceEE-------cCCHHHHhC--CC
Confidence 5799999999999999999999998 589999886554443232333321 11112221 223556677 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC--eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK--NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~iv~~SS 129 (347)
|+||.+||.... ......+.+..|+...+.+++.+.+.... .++.+|.
T Consensus 78 DvVvitaG~p~k--pG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 78 KYIVSSGGAPRK--EGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127 (343)
T ss_dssp EEEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred CEEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence 999999996432 12334567888999999999999887543 2556654
No 340
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.17 E-value=1.1e-05 Score=71.19 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=72.6
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEe-cCCCCHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK-LDLRDKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~ 78 (347)
|+|||.|+|| |.+|..++..|+..|+ +|.+++++..+.+.....+.+..........+.. .| + +.++ +
T Consensus 1 M~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~--~ 70 (309)
T 1ur5_A 1 MRKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTA--N 70 (309)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGT--T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHC--C
Confidence 7899999998 9999999999999997 9888888776554333333221100011222222 22 2 3455 6
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
+|+||.++|..... .....+....|+.....+++.+.+.....+|.+.|
T Consensus 71 aD~Vi~a~g~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 71 SDVIVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred CCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 99999999865321 11223456778888888999888876444554444
No 341
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.10 E-value=2.4e-05 Score=69.39 Aligned_cols=116 Identities=17% Similarity=0.206 Sum_probs=78.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
.+||.|+|+ |.+|+.++..|+..|+ +|.++++...+.+.....+.+..+.....+.....| . +.++ ++
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~--~a 74 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCK--DA 74 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGT--TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhC--CC
Confidence 369999995 9999999999999987 899998865554433333433222111234443333 2 3455 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||.+||.... ......+.+..|+.....+++.+.+.... .++.+|.
T Consensus 75 DvVvi~ag~p~k--pG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 75 DIVCICAGANQK--PGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CEEEEecccCCC--CCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 999999996432 12334567888999999999999887533 5666654
No 342
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.08 E-value=1.2e-05 Score=72.69 Aligned_cols=93 Identities=19% Similarity=0.170 Sum_probs=68.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++|+|.|+ |++|+.+++.|++. ++|.+.+|+.++.+... .....+..|+.|.+++.++++ ++|+
T Consensus 16 ~~~v~IiGa-G~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la-----------~~~~~~~~d~~~~~~l~~ll~--~~Dv 80 (365)
T 2z2v_A 16 HMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNENLEKVK-----------EFATPLKVDASNFDKLVEVMK--EFEL 80 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHHHHHHT-----------TTSEEEECCTTCHHHHHHHHT--TCSC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHcC-CeEEEEECCHHHHHHHH-----------hhCCeEEEecCCHHHHHHHHh--CCCE
Confidence 368999995 99999999999998 99999999765543321 134456789999999999998 5999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEec
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSS 128 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~S 128 (347)
||++..... + ..++++|.+.|. +++-+|
T Consensus 81 VIn~~P~~~--------------~----~~v~~a~l~~G~-~~vD~s 108 (365)
T 2z2v_A 81 VIGALPGFL--------------G----FKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp EEECCCHHH--------------H----HHHHHHHHHTTC-CEEECC
T ss_pred EEECCChhh--------------h----HHHHHHHHHhCC-eEEEcc
Confidence 999854211 1 135677777765 555544
No 343
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=98.03 E-value=2.1e-05 Score=66.52 Aligned_cols=96 Identities=10% Similarity=0.086 Sum_probs=68.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d 80 (347)
.++|+|+|+ |.+|+.+++.|.+.|+ |+++++++...+. +. .++.++.+|.+|.+.+.++ ++ ++|
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~----~~-------~~~~~i~gd~~~~~~l~~a~i~--~ad 73 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKV----LR-------SGANFVHGDPTRVSDLEKANVR--GAR 73 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH----HH-------TTCEEEESCTTCHHHHHHTTCT--TCS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH----Hh-------cCCeEEEcCCCCHHHHHhcCcc--hhc
Confidence 478999996 9999999999999999 9999876554322 11 2578899999999998877 55 689
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
.||-+.+.. ..|+ .++..+++.+.+ ++|.-.+
T Consensus 74 ~vi~~~~~d-------------~~n~----~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 74 AVIVDLESD-------------SETI----HCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp EEEECCSCH-------------HHHH----HHHHHHHHHCSSSEEEEECS
T ss_pred EEEEcCCCc-------------HHHH----HHHHHHHHHCCCCeEEEEEC
Confidence 999875310 2233 455666776654 6654433
No 344
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.95 E-value=1e-05 Score=66.54 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=50.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHH---HHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALE---VVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|++++|++.+.+. +.++ +... ..|..+.+..+ +.....+
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~----~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRL------GVEY-VGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTT------CCSE-EEETTCSTHHHHHHHHTTTCC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHc------CCCE-EeeCCcHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999999886443322 2221 1111 23555543333 3332226
Q ss_pred CcEEEEccc
Q 040584 79 FDAVIHFAG 87 (347)
Q Consensus 79 ~d~vih~a~ 87 (347)
+|+||+++|
T Consensus 108 ~D~vi~~~g 116 (198)
T 1pqw_A 108 VDVVLNSLA 116 (198)
T ss_dssp EEEEEECCC
T ss_pred CeEEEECCc
Confidence 999999986
No 345
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.91 E-value=1e-05 Score=67.37 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=50.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
|+|+|+||+|++|+.+++.|++.|++|++++|++.+.+...+.+.... . ..|+. .+++.++++ ++|+|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~------~~~~~-~~~~~~~~~--~~D~V 68 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA---G------DASIT-GMKNEDAAE--ACDIA 68 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH---S------SCCEE-EEEHHHHHH--HCSEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccc---c------cCCCC-hhhHHHHHh--cCCEE
Confidence 589999999999999999999999999999987655443332221110 0 01121 123555666 48999
Q ss_pred EEccc
Q 040584 83 IHFAG 87 (347)
Q Consensus 83 ih~a~ 87 (347)
|++..
T Consensus 69 i~~~~ 73 (212)
T 1jay_A 69 VLTIP 73 (212)
T ss_dssp EECSC
T ss_pred EEeCC
Confidence 99974
No 346
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.89 E-value=5.7e-05 Score=66.88 Aligned_cols=115 Identities=14% Similarity=0.245 Sum_probs=67.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
++||.|+|+ |.+|+.++..|+..|. ++.++++...+.+.....+.+.... ...+.....| . +.++ ++
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-~~~~~i~~~~---~----~a~~--~a 77 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPF-TSPKKIYSAE---Y----SDAK--DA 77 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGG-SCCCEEEECC---G----GGGT--TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhh-cCCcEEEECc---H----HHhc--CC
Confidence 379999996 9999999999999887 8999988655544333333332211 1233433332 2 3455 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||++||.... ......+.++.|+.-.+.+.+.+.+.... .++.+|.
T Consensus 78 DiVvi~ag~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 78 DLVVITAGAPQK--PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp SEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CEEEECCCCCCC--CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 999999996432 12334567888999999999999887533 5666554
No 347
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.89 E-value=0.00019 Score=63.99 Aligned_cols=117 Identities=17% Similarity=0.154 Sum_probs=74.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhcc--CCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGY--QGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|||.|+|| |.+|..++..|+..|+ +|.+++++....+.....+.+.... ...++.. . .++.++++ ++
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t------~d~~ea~~--~a 79 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E------YSYEAALT--GA 79 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E------CSHHHHHT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e------CCHHHHhC--CC
Confidence 68999997 9999999999999998 9999999877655433322221110 0112221 1 23455676 69
Q ss_pred cEEEEccccccCCcccc---CcchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQ---KPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~---~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
|+||-++|.+.....+. ...+....|+...+.+++.+.+....-++.+.|
T Consensus 80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 132 (331)
T 1pzg_A 80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 132 (331)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 99999998643211100 234556678888888888888774333333333
No 348
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.86 E-value=0.00013 Score=62.20 Aligned_cols=106 Identities=20% Similarity=0.179 Sum_probs=71.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCC-------------------chhHHHHHHHHHhhccCCCCeEEEec
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLD-------------------NASEIAVAKVKELAGYQGNNMTFHKL 62 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (347)
++|+|+| .|.+|+.+++.|.+.|. +++++++.. .+.+...+.+..+.+ .-.+..+..
T Consensus 32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np--~~~v~~~~~ 108 (249)
T 1jw9_B 32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP--HIAITPVNA 108 (249)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT--TSEEEEECS
T ss_pred CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC--CcEEEEEec
Confidence 6899999 68899999999999997 788888876 455555555555422 123455555
Q ss_pred CCCCHHHHHHHHccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccc
Q 040584 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATA 132 (347)
Q Consensus 63 Dl~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~ 132 (347)
++. .+.+.+++. ++|+||.+.. |...-..+.++|++.++ .+|+.+....
T Consensus 109 ~~~-~~~~~~~~~--~~DvVi~~~d-----------------~~~~~~~l~~~~~~~~~-p~i~~~~~g~ 157 (249)
T 1jw9_B 109 LLD-DAELAALIA--EHDLVLDCTD-----------------NVAVRNQLNAGCFAAKV-PLVSGAAIRM 157 (249)
T ss_dssp CCC-HHHHHHHHH--TSSEEEECCS-----------------SHHHHHHHHHHHHHHTC-CEEEEEEEBT
T ss_pred cCC-HhHHHHHHh--CCCEEEEeCC-----------------CHHHHHHHHHHHHHcCC-CEEEeeeccc
Confidence 565 355677777 5899999863 11222356677777775 5666655443
No 349
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.82 E-value=8.4e-05 Score=65.47 Aligned_cols=80 Identities=18% Similarity=0.254 Sum_probs=58.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCC---CchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNL---DNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
+++++|+|+ |.+|+.++..|.+.|. +|+++.|+ ..+.+.+.+.+.... .......++.+.+++.+.+.
T Consensus 154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-----~~~~~~~~~~~~~~l~~~l~-- 225 (315)
T 3tnl_A 154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-----DCKAQLFDIEDHEQLRKEIA-- 225 (315)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-----SCEEEEEETTCHHHHHHHHH--
T ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-----CCceEEeccchHHHHHhhhc--
Confidence 478999996 8999999999999998 89999998 444444444443321 23334456677777888887
Q ss_pred CCcEEEEccccc
Q 040584 78 KFDAVIHFAGLK 89 (347)
Q Consensus 78 ~~d~vih~a~~~ 89 (347)
.+|+||++....
T Consensus 226 ~aDiIINaTp~G 237 (315)
T 3tnl_A 226 ESVIFTNATGVG 237 (315)
T ss_dssp TCSEEEECSSTT
T ss_pred CCCEEEECccCC
Confidence 589999998654
No 350
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.81 E-value=0.00019 Score=63.57 Aligned_cols=117 Identities=16% Similarity=0.141 Sum_probs=77.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
++||.|+| +|.+|..++..|+..|. +|.++++.+.+.+.....+.+..............+ |. ++++ ++|
T Consensus 5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~--~aD 75 (321)
T 3p7m_A 5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLE--NSD 75 (321)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGT--TCS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHC--CCC
Confidence 37999999 59999999999999988 999999887765433333332211001122222111 22 3566 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+||.+||.... ......+.+..|+...+.+++.+.+.... .++.+|.
T Consensus 76 vVIi~ag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 76 VVIVTAGVPRK--PGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp EEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEEcCCcCCC--CCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 99999986432 12234567788999999999998887533 6666653
No 351
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.81 E-value=8.6e-05 Score=68.19 Aligned_cols=73 Identities=26% Similarity=0.273 Sum_probs=58.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d 80 (347)
+++|+|+| .|.+|+.+++.|.+.|++|+++++++...... .. .++..+.+|.++.+.+.++ ++ ++|
T Consensus 4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~----~~------~g~~vi~GDat~~~~L~~agi~--~A~ 70 (413)
T 3l9w_A 4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETL----RK------FGMKVFYGDATRMDLLESAGAA--KAE 70 (413)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH----HH------TTCCCEESCTTCHHHHHHTTTT--TCS
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH----Hh------CCCeEEEcCCCCHHHHHhcCCC--ccC
Confidence 36899999 59999999999999999999999876544332 22 2567899999999998887 55 689
Q ss_pred EEEEccc
Q 040584 81 AVIHFAG 87 (347)
Q Consensus 81 ~vih~a~ 87 (347)
+||-+.+
T Consensus 71 ~viv~~~ 77 (413)
T 3l9w_A 71 VLINAID 77 (413)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9998864
No 352
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.79 E-value=0.00015 Score=63.39 Aligned_cols=116 Identities=13% Similarity=0.109 Sum_probs=76.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||.|+|+ |.+|..++..|++.|+ +|.++++.+...+...-.+.+..........+... .| .++++ ++|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~--~aD 71 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLK--GSE 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhC--CCC
Confidence 68999998 9999999999999998 99999987655432222222221111112222222 12 34566 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+||.+||.... ......+.+..|+...+.+.+.+.+.... .++.+|.
T Consensus 72 iVViaag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 99999986532 12234567888999999999998887533 6666664
No 353
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.79 E-value=1.7e-05 Score=68.69 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=28.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHh-CCCeEEE-EeCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLL-GGYKTVV-VDNLD 36 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~-~g~~v~~-~~r~~ 36 (347)
|+|.|+|++|.+|+.+++.+++ .|+++.+ +++++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 6899999999999999999875 5888874 45443
No 354
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.75 E-value=0.00021 Score=63.03 Aligned_cols=116 Identities=16% Similarity=0.130 Sum_probs=75.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||.|+|+ |.+|+.++..|++.|. +|.+++++..+.+.....+.+..............| + .+.++ ++|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~--~aD 71 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTE--DSD 71 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhC--CCC
Confidence 68999996 9999999999999886 899999887765433333332211001122333222 1 23455 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+||.+||.... ......+.++.|+...+.+.+.+.+.... .++.+|.
T Consensus 72 vVii~ag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 72 VCIITAGLPRS--PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EEEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EEEECCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 99999996532 12344677888999999999998887533 5666654
No 355
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.75 E-value=0.0003 Score=62.37 Aligned_cols=116 Identities=16% Similarity=0.196 Sum_probs=78.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
.+||.|+|+ |.+|..++..|+.+|. ++.++++...+.+...-.+.+.... ......+.. .|.+ .++ ++
T Consensus 19 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~-~~~~~i~~~--~d~~----~~~--~a 88 (331)
T 4aj2_A 19 QNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF-LKTPKIVSS--KDYS----VTA--NS 88 (331)
T ss_dssp SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG-CSCCEEEEC--SSGG----GGT--TE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhc-cCCCeEEEc--CCHH----HhC--CC
Confidence 379999997 9999999999999987 8999988755444433334432111 111222222 1332 355 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||.+||.... ......+.++.|+.-.+.+.+.+.+.... .++.+|.
T Consensus 89 DiVvi~aG~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 89 KLVIITAGARQQ--EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp EEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CEEEEccCCCCC--CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999997532 22345678899999999999998887533 6666664
No 356
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.74 E-value=0.00021 Score=63.04 Aligned_cols=116 Identities=22% Similarity=0.194 Sum_probs=74.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCC--chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLD--NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
++|.|+|+ |.+|..++..|+..|+ +|+++++++ ...+.....+.+..............+ |. +.++ ++
T Consensus 9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~----~a~~--~a 79 (315)
T 3tl2_A 9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY----ADTA--DS 79 (315)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG----GGGT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH----HHhC--CC
Confidence 58999996 9999999999999999 999999873 232222222221111001111222111 22 3455 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||.+||..... .....+.++.|+...+.+.+.+.+.... .++.+|.
T Consensus 80 DvVIiaag~p~kp--g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 80 DVVVITAGIARKP--GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 9999999965321 2334667888999999999998887533 6666664
No 357
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.73 E-value=4.3e-05 Score=69.31 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=56.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
.++|+|+|+ |.+|+.+++.|...|++|++++|++.+.+...+. . +.. +.+|..+.+++.+++. ++|+
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~---~----g~~---~~~~~~~~~~l~~~~~--~~Dv 232 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV---F----GGR---VITLTATEANIKKSVQ--HADL 232 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---T----TTS---EEEEECCHHHHHHHHH--HCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---c----Cce---EEEecCCHHHHHHHHh--CCCE
Confidence 378999998 9999999999999999999999876544322211 1 111 3456677888888887 5999
Q ss_pred EEEccccc
Q 040584 82 VIHFAGLK 89 (347)
Q Consensus 82 vih~a~~~ 89 (347)
||++++..
T Consensus 233 Vi~~~g~~ 240 (369)
T 2eez_A 233 LIGAVLVP 240 (369)
T ss_dssp EEECCC--
T ss_pred EEECCCCC
Confidence 99999853
No 358
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=97.72 E-value=7.8e-05 Score=66.59 Aligned_cols=76 Identities=17% Similarity=0.234 Sum_probs=52.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|++++|++.+.+.. .++ +.. . ..|..+.+ .+.+.....+
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~----~~~----g~~--~-~~d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA----RKL----GCH--H-TINYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHH----TCS--E-EEETTTSCHHHHHHHHHTTCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHc----CCC--E-EEECCCHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999999999875443322 222 111 1 23554433 3333433336
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 215 ~d~vi~~~g~ 224 (333)
T 1wly_A 215 VDVVYDSIGK 224 (333)
T ss_dssp EEEEEECSCT
T ss_pred CeEEEECCcH
Confidence 9999999974
No 359
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.71 E-value=0.00041 Score=61.43 Aligned_cols=116 Identities=17% Similarity=0.123 Sum_probs=76.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEE-ecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH-KLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~ 79 (347)
++||.|+|| |.+|..++..|+..|+ +|.++++...+.+.....+.+..........+. ..| . ++++ ++
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----~a~~--~a 76 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----AAIE--GA 76 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----GGGT--TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----HHHC--CC
Confidence 369999997 9999999999999998 999999988765433333332211001122222 122 2 3566 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||.+||.... ......+.+..|+...+.+++.+.+.... .++.+|.
T Consensus 77 DiVIiaag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 77 DVVIVTAGVPRK--PGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CEEEEccCcCCC--CCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 999999986432 12234567788999999999998887533 6666664
No 360
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=97.69 E-value=0.00011 Score=65.94 Aligned_cols=75 Identities=16% Similarity=0.239 Sum_probs=51.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|+++++++.+.+.. .++ + ... ..|..+.+ .+.++....+
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~----~~~----g--a~~-~~d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA----KAL----G--ADE-TVNYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHH----T--CSE-EEETTSTTHHHHHHHHTTTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hhc----C--CCE-EEcCCcccHHHHHHHHhCCCC
Confidence 46899999999999999999999999999998875544332 222 1 111 13555432 3333333236
Q ss_pred CcEEEEccc
Q 040584 79 FDAVIHFAG 87 (347)
Q Consensus 79 ~d~vih~a~ 87 (347)
+|+||+++|
T Consensus 236 ~d~vi~~~g 244 (343)
T 2eih_A 236 ADKVVDHTG 244 (343)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999998
No 361
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.68 E-value=6.7e-05 Score=66.82 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=51.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHH---HHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAA---LEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|++++|++.+.+.. .++ +.. . ..|..+.+. +.+.....+
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~----~~~----g~~--~-~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA----LKA----GAW--Q-VINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HHH----TCS--E-EEETTTSCHHHHHHHHTTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHc----CCC--E-EEECCCccHHHHHHHHhCCCC
Confidence 46899999999999999999999999999998875443322 222 111 1 235544333 333332336
Q ss_pred CcEEEEccc
Q 040584 79 FDAVIHFAG 87 (347)
Q Consensus 79 ~d~vih~a~ 87 (347)
+|+||+++|
T Consensus 210 ~D~vi~~~g 218 (327)
T 1qor_A 210 VRVVYDSVG 218 (327)
T ss_dssp EEEEEECSC
T ss_pred ceEEEECCc
Confidence 999999998
No 362
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.68 E-value=0.00061 Score=60.24 Aligned_cols=115 Identities=13% Similarity=0.130 Sum_probs=77.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEE-ecCCCCHHHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFH-KLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~ 78 (347)
.+||.|+|+ |.+|..++..|+..|. +|.++++...+.+.....+.+.... ....... ..|..+ ++ +
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~-~~~~~i~~t~d~~~-------~~--d 89 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLF-LHTAKIVSGKDYSV-------SA--G 89 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGG-SCCSEEEEESSSCS-------CS--S
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhc-ccCCeEEEcCCHHH-------hC--C
Confidence 378999998 9999999999999986 8999988665544433333332111 1112222 234322 44 6
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+|+||-+||.... ......+.+..|+.-.+.+++.+.+.... .++.+|.
T Consensus 90 aDiVIitaG~p~k--pG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 90 SKLVVITAGARQQ--EGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp CSEEEECCSCCCC--SSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 9999999997542 22344567888999999999988887533 5666664
No 363
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.67 E-value=5.6e-05 Score=67.97 Aligned_cols=75 Identities=17% Similarity=0.239 Sum_probs=52.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHH----HHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAAL----EVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~----~~~~~~~ 77 (347)
+++|+|+||+|.+|..+++.+...|++|+++.|++.+.+.. .++ +... ..|..+.+++ .++...
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~~~------g~~~-~~d~~~~~~~~~~~~~~~~~- 237 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----RSI------GGEV-FIDFTKEKDIVGAVLKATDG- 237 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----HHT------TCCE-EEETTTCSCHHHHHHHHHTS-
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----HHc------CCce-EEecCccHhHHHHHHHHhCC-
Confidence 46899999999999999999999999999999876654322 222 1121 2365533333 333334
Q ss_pred CCcEEEEcccc
Q 040584 78 KFDAVIHFAGL 88 (347)
Q Consensus 78 ~~d~vih~a~~ 88 (347)
++|+||+++|.
T Consensus 238 ~~D~vi~~~g~ 248 (347)
T 2hcy_A 238 GAHGVINVSVS 248 (347)
T ss_dssp CEEEEEECSSC
T ss_pred CCCEEEECCCc
Confidence 69999999873
No 364
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.66 E-value=0.00045 Score=61.14 Aligned_cols=114 Identities=17% Similarity=0.197 Sum_probs=73.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+||.|+|| |.+|..++..|+.+| .+|.+++....+.+.....+.+.....+..+.+.. | + .++++ ++|
T Consensus 7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~--~aD 76 (317)
T 3d0o_A 7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCH--DAD 76 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhC--CCC
Confidence 59999998 999999999999988 48999987654443322222222111112333332 2 2 33455 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEec
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSS 128 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~S 128 (347)
+||.+++..... .....+....|+.....+.+.+.+.... .+|.+|
T Consensus 77 vVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 77 LVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 999999865321 2233456677888888899888887543 555543
No 365
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.65 E-value=0.00043 Score=60.30 Aligned_cols=116 Identities=13% Similarity=0.117 Sum_probs=76.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||.|+|| |.+|+.++..|+.++ -++.+++......+-..-.+.+-............. .|++ .++ +.|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~--~aD 71 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLK--GSE 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGT--TCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH----HhC--CCC
Confidence 78999995 999999999998876 478898876544433333333322111122223322 1232 355 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+||-.||.... ......+.++.|..-.+.+.+.+.++... .++.+|.
T Consensus 72 vVvitAG~prk--pGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEEECCCCCCC--SSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEEecCCCCC--CCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 99999997542 22345678899999999999999887644 4555554
No 366
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.62 E-value=0.00085 Score=59.62 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=72.9
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhcc--CCCCeEEEecCCCCHHHHHHHHccC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGY--QGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
|+++|.|+|| |.+|..++..|+..|+ +|++.+++....+.....+.+.... ...++.. ..| + ++++
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~al~-- 81 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN------Y-EYLQ-- 81 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC------H-HHHC--
Confidence 4579999997 9999999999999998 9999999877655432222221110 0112222 122 2 3455
Q ss_pred CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 78 KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
++|+||-+++.+.. +. ....+....|+...+.+++.+.+.... .+|.+|.
T Consensus 82 ~aD~VI~avg~p~k-~g-~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 82 NSDVVIITAGVPRK-PN-MTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp TCSEEEECCSCCCC-TT-CCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCEEEEcCCCCCC-CC-CchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 69999999985431 11 122345566888888888887776433 4454543
No 367
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.62 E-value=0.00017 Score=64.31 Aligned_cols=75 Identities=20% Similarity=0.288 Sum_probs=50.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHc---cCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFA---GTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~~ 78 (347)
+++|+|+||+|.||..+++.+...|++|+++++++.+.+. +.++ +.. ...|..+.+++.+.+. ..+
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~----~~~~------g~~-~~~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQI------GFD-AAFNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHT------TCS-EEEETTSCSCHHHHHHHHCTTC
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHhc------CCc-EEEecCCHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999886544332 2222 111 1236555222332222 126
Q ss_pred CcEEEEccc
Q 040584 79 FDAVIHFAG 87 (347)
Q Consensus 79 ~d~vih~a~ 87 (347)
+|+||+++|
T Consensus 215 ~d~vi~~~g 223 (333)
T 1v3u_A 215 YDCYFDNVG 223 (333)
T ss_dssp EEEEEESSC
T ss_pred CeEEEECCC
Confidence 999999997
No 368
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.62 E-value=0.00047 Score=60.99 Aligned_cols=114 Identities=14% Similarity=0.219 Sum_probs=72.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+||.|+|| |.+|..++..|+..+. ++.++++...+.+.....+.+... ....+.+.. | + .++++ ++|
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~v~~-~--~----~~a~~--~aD 74 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-FTAPKKIYS-G--E----YSDCK--DAD 74 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-GSCCCEEEE-C--C----GGGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH-hcCCeEEEE-C--C----HHHhC--CCC
Confidence 68999998 9999999999999876 899998865554433333333221 112333332 2 2 23455 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+||..++..... .....+.+..|+.....+++.+.+.... .+|.+|.
T Consensus 75 vVii~ag~~~~~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 75 LVVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp EEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 999999865321 1223456778999999999998887533 6666543
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=97.60 E-value=0.00014 Score=65.62 Aligned_cols=76 Identities=14% Similarity=0.274 Sum_probs=52.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|++++|++.+.+.. .++ +.. ...|..+.+ .+.+.....+
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~----g~~---~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA----EKL----GAA---AGFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHH----TCS---EEEETTTSCHHHHHHHHTTTSC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHc----CCc---EEEecCChHHHHHHHHHhcCCC
Confidence 36899999999999999999999999999999875544332 222 111 123444433 3333333236
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 232 ~d~vi~~~G~ 241 (354)
T 2j8z_A 232 VNLILDCIGG 241 (354)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCc
Confidence 9999999984
No 370
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.59 E-value=2.3e-05 Score=70.24 Aligned_cols=100 Identities=16% Similarity=0.132 Sum_probs=58.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC------CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG------YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFA 75 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 75 (347)
|++|+|.||||++|+.|++.|++++ .+++.+.+.++..+......+.+.+. ..+.+ .|+ +.+ .+.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~--~~~~~--~~~-~~~----~~~ 79 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL--AHRVV--EPT-EAA----VLG 79 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGG--TTCBC--EEC-CHH----HHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccc--ceeee--ccC-CHH----Hhc
Confidence 4699999999999999999999987 36776653322111000000000000 01111 122 222 244
Q ss_pred cCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccc
Q 040584 76 GTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATA 132 (347)
Q Consensus 76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~ 132 (347)
++|+||.+.+... +..+++.+ +.|+ ++|-+|+..-
T Consensus 80 --~~DvVf~alg~~~------------------s~~~~~~~-~~G~-~vIDlSa~~R 114 (352)
T 2nqt_A 80 --GHDAVFLALPHGH------------------SAVLAQQL-SPET-LIIDCGADFR 114 (352)
T ss_dssp --TCSEEEECCTTSC------------------CHHHHHHS-CTTS-EEEECSSTTT
T ss_pred --CCCEEEECCCCcc------------------hHHHHHHH-hCCC-EEEEECCCcc
Confidence 5999999987432 22466777 6675 7888998753
No 371
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.58 E-value=0.00074 Score=59.69 Aligned_cols=115 Identities=18% Similarity=0.278 Sum_probs=72.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
++||.|+|+ |.+|..++..|+..|. +|++++++....+.....+.+........+.+.. | +. +.++ ++
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al~--~a 75 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDCR--DA 75 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGTT--TC
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHhC--CC
Confidence 369999998 9999999999988774 8999998754333322233322111111333332 2 22 3455 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEec
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSS 128 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~S 128 (347)
|+||.+++...... ....+.+..|......+++.+.+.... .++.+|
T Consensus 76 DvViia~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t 123 (316)
T 1ldn_A 76 DLVVICAGANQKPG--ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp SEEEECCSCCCCTT--TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred CEEEEcCCCCCCCC--CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence 99999998754322 223455677888888888888876433 455444
No 372
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=97.58 E-value=0.00015 Score=65.18 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=51.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|++++|++.+.+. ..++ +... ..|..+.+ .+.+.....+
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~------ga~~-~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----VLQN------GAHE-VFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHT------TCSE-EEETTSTTHHHHHHHHHCTTC
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH----HHHc------CCCE-EEeCCCchHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999887554432 2222 1111 23554433 3333333336
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 240 ~D~vi~~~G~ 249 (351)
T 1yb5_A 240 IDIIIEMLAN 249 (351)
T ss_dssp EEEEEESCHH
T ss_pred cEEEEECCCh
Confidence 9999999973
No 373
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.57 E-value=0.00033 Score=61.97 Aligned_cols=112 Identities=13% Similarity=0.157 Sum_probs=69.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+||.|+|+ |.+|..++..|+..|. +|.+++....+.+.....+.+... ....+.+. . .+ .++++ ++|
T Consensus 8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~-~--~~----~~a~~--~aD 76 (318)
T 1y6j_A 8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP-FMGQMSLY-A--GD----YSDVK--DCD 76 (318)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC-CTTCEEEC-----C----GGGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH-hcCCeEEE-E--CC----HHHhC--CCC
Confidence 68999997 9999999999999987 999999876655432333322110 11122222 1 12 23465 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEe
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFS 127 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~ 127 (347)
+||.+++.... ......+....|+.....+++.+.+.... .+|.+
T Consensus 77 vVii~~g~p~k--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 77 VIVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp EEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred EEEEcCCCCCC--CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 99999986431 11223456778999999999998886543 45544
No 374
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.56 E-value=0.0011 Score=59.16 Aligned_cols=116 Identities=16% Similarity=0.067 Sum_probs=73.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-------eEEEEeCCCchh--HHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-------KTVVVDNLDNAS--EIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV 73 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (347)
.||.|+||+|.||+.|+..|.+... ++.+++..+... +-..-.+.+.. .......+..+ | ..++
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~--~~~~~~~~~~~--~---~~~a 97 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA--FPLLDKVVVTA--D---PRVA 97 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT--CTTEEEEEEES--C---HHHH
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC--ccCCCcEEEcC--C---hHHH
Confidence 3899999999999999999988642 677777644321 11111222211 11111222221 2 3456
Q ss_pred HccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcC-C-CeEEEecc
Q 040584 74 FAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHG-C-KNLVFSSS 129 (347)
Q Consensus 74 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~-~~iv~~SS 129 (347)
++ ++|+||-.||...- ......+.++.|+.-.+.+.+.+.+.. . ..++.+|.
T Consensus 98 ~~--~advVvi~aG~prk--pGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 98 FD--GVAIAIMCGAFPRK--AGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp TT--TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred hC--CCCEEEECCCCCCC--CCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence 77 69999999997542 223456788999999999999988753 2 25666664
No 375
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.55 E-value=0.00098 Score=59.03 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=72.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEe-cCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK-LDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~ 79 (347)
++||.|+|| |.+|..++..|+..|+ +|.+++++..+.+.....+.+..........+.. .| + ++++ ++
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~--~a 73 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLA--GA 73 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGT--TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhC--CC
Confidence 379999997 9999999999999998 9889998876655433333221110011122221 22 2 3455 69
Q ss_pred cEEEEccccccCCccc---cCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESV---QKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||.+++.+...... ....+....|+...+.+++.+.+.... .+|.+|.
T Consensus 74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 127 (322)
T 1t2d_A 74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN 127 (322)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9999999854311100 002345666877888888887776433 4555543
No 376
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.54 E-value=0.00054 Score=60.79 Aligned_cols=115 Identities=14% Similarity=0.204 Sum_probs=74.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
++||.|+|| |.+|..++..|+..+. ++.++++...+.+.....+.+... ....+.+.. | + .++++ ++
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~~-~--~----~~a~~--~a 77 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP-FTSPKKIYS-A--E----YSDAK--DA 77 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEE-C--C----GGGGG--GC
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH-hcCCeEEEE-C--C----HHHhC--CC
Confidence 479999998 9999999999998875 889998865544433333332211 112333332 2 2 23355 59
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCC-CeEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGC-KNLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~iv~~SS 129 (347)
|+||..++..... .....+.+..|+.....+++.+.+... ..+|.+|.
T Consensus 78 DvVii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 78 DLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9999999864321 223345677788889999998888753 36666643
No 377
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.54 E-value=0.00061 Score=59.95 Aligned_cols=115 Identities=15% Similarity=0.112 Sum_probs=74.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC-C--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG-G--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~-g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|||.|+||+|.+|..++..|.++ + .++.+++... ..+-..-.+.+. ......... .. +...+.++ ++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~----~~~~~v~~~-~~--~~~~~~~~--~a 70 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI----PTAVKIKGF-SG--EDATPALE--GA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS----CSSEEEEEE-CS--SCCHHHHT--TC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC----CCCceEEEe-cC--CCcHHHhC--CC
Confidence 68999999999999999999875 5 5788888765 322212222221 112222111 00 11234555 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||.+||.... ......+.++.|+...+.+.+.+.+.... .++.+|.
T Consensus 71 Divii~ag~~rk--pG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN 119 (312)
T 3hhp_A 71 DVVLISAGVARK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (312)
T ss_dssp SEEEECCSCSCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 999999996432 22345678889999999999998887533 6666664
No 378
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.51 E-value=0.00014 Score=64.97 Aligned_cols=94 Identities=19% Similarity=0.242 Sum_probs=55.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC---eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY---KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
+|+|+|.||+|.+|+.+++.|++++| +++++......... +. + .+......|+ +.+ .+. +
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~----~~-~-----~g~~i~~~~~-~~~----~~~--~ 68 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR----MG-F-----AESSLRVGDV-DSF----DFS--S 68 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE----EE-E-----TTEEEECEEG-GGC----CGG--G
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc----cc-c-----CCcceEEecC-CHH----Hhc--C
Confidence 47899999999999999999997654 45555422111000 00 0 0111111121 111 134 5
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
+|+||.+.+.. ....++..+.+.|+ ++|.+|+..
T Consensus 69 ~DvV~~a~g~~------------------~s~~~a~~~~~aG~-kvId~Sa~~ 102 (340)
T 2hjs_A 69 VGLAFFAAAAE------------------VSRAHAERARAAGC-SVIDLSGAL 102 (340)
T ss_dssp CSEEEECSCHH------------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred CCEEEEcCCcH------------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence 99999998632 13356677777787 577788764
No 379
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.48 E-value=0.00015 Score=65.41 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=50.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGTK 78 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~ 78 (347)
++|+|+||+|.+|..+++.+...|+ +|+++++++.+.+...+. + +.. ...|..+.+ .+.+.... +
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~------g~~-~~~d~~~~~~~~~~~~~~~~-~ 230 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---L------GFD-AAINYKKDNVAEQLRESCPA-G 230 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---S------CCS-EEEETTTSCHHHHHHHHCTT-C
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---c------CCc-eEEecCchHHHHHHHHhcCC-C
Confidence 7899999999999999999999999 999998865443322211 2 111 123554432 23333333 6
Q ss_pred CcEEEEccc
Q 040584 79 FDAVIHFAG 87 (347)
Q Consensus 79 ~d~vih~a~ 87 (347)
+|+||+++|
T Consensus 231 ~d~vi~~~G 239 (357)
T 2zb4_A 231 VDVYFDNVG 239 (357)
T ss_dssp EEEEEESCC
T ss_pred CCEEEECCC
Confidence 999999997
No 380
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=97.46 E-value=0.00031 Score=63.10 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=51.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~~ 79 (347)
++|+|+||+|.+|...++.+...|.+|+++++++.+.+... ++ +.. .. .|..+.+ .+.++....++
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~----Ga~-~~--~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DI----GAA-HV--LNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HH----TCS-EE--EETTSTTHHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hc----CCC-EE--EECCcHHHHHHHHHHhcCCCC
Confidence 68999999999999999999999999999998776654332 22 111 12 2333322 33333322369
Q ss_pred cEEEEcccc
Q 040584 80 DAVIHFAGL 88 (347)
Q Consensus 80 d~vih~a~~ 88 (347)
|+||+++|.
T Consensus 235 D~vid~~g~ 243 (349)
T 3pi7_A 235 RIFLDAVTG 243 (349)
T ss_dssp CEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999874
No 381
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.46 E-value=9.5e-05 Score=64.00 Aligned_cols=74 Identities=22% Similarity=0.273 Sum_probs=50.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++++|+|+ |.+|+.+++.|++.|++|++++|+.++.+...+.+... . .+. ..|+ +++.+ . ++|+
T Consensus 119 ~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~----~-~~~--~~~~---~~~~~--~--~~Di 183 (271)
T 1nyt_A 119 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----G-SIQ--ALSM---DELEG--H--EFDL 183 (271)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----S-SEE--ECCS---GGGTT--C--CCSE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc----C-Cee--EecH---HHhcc--C--CCCE
Confidence 478999997 78999999999999999999998766554443332211 1 221 2333 22222 2 6999
Q ss_pred EEEcccccc
Q 040584 82 VIHFAGLKA 90 (347)
Q Consensus 82 vih~a~~~~ 90 (347)
||++++...
T Consensus 184 vVn~t~~~~ 192 (271)
T 1nyt_A 184 IINATSSGI 192 (271)
T ss_dssp EEECCSCGG
T ss_pred EEECCCCCC
Confidence 999998654
No 382
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.46 E-value=0.00018 Score=64.22 Aligned_cols=76 Identities=18% Similarity=0.265 Sum_probs=51.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|+++++++.+.+... .++ +... ..|..+.+ .+.+... .+
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~---~~~------g~~~-~~~~~~~~~~~~~~~~~~-~~ 218 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV---EEL------GFDG-AIDYKNEDLAAGLKRECP-KG 218 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HTT------CCSE-EEETTTSCHHHHHHHHCT-TC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHc------CCCE-EEECCCHHHHHHHHHhcC-CC
Confidence 468999999999999999999999999999988765443321 122 1111 13444433 2223222 26
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 219 ~d~vi~~~g~ 228 (336)
T 4b7c_A 219 IDVFFDNVGG 228 (336)
T ss_dssp EEEEEESSCH
T ss_pred ceEEEECCCc
Confidence 9999999973
No 383
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.46 E-value=0.0007 Score=59.53 Aligned_cols=113 Identities=19% Similarity=0.250 Sum_probs=66.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||.|+|| |.+|..++..|+..|+ +|++++++..+.+.....+.+... ......+... +. +.++ ++|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~---~~----~a~~--~aD 69 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP-VSHGTRVWHG---GH----SELA--DAQ 69 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC-TTSCCEEEEE---CG----GGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh-hcCCeEEEEC---CH----HHhC--CCC
Confidence 58999997 9999999999999999 999999875433322222211100 0112222221 22 3455 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEec
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSS 128 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~S 128 (347)
+||.+++..... .....+.+..|+...+.+++.+.+.... .+|.+|
T Consensus 70 vVIi~~~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 70 VVILTAGANQKP--GESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp EEEECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred EEEEcCCCCCCC--CCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 999999854321 1223456677888889999888876433 455444
No 384
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.44 E-value=0.00024 Score=63.34 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=51.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH---HHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK---AALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|...++.+...|++|+++++++.+.+. +.++ +.. .. .|..+. +.+.+.....+
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~----ga~-~~--~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI----AKEY----GAE-YL--INASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHT----TCS-EE--EETTTSCHHHHHHHHTTTSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHc----CCc-EE--EeCCCchHHHHHHHHhCCCC
Confidence 3689999999999999999999999999999886554432 2222 111 12 233332 23344443346
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 218 ~D~vid~~g~ 227 (334)
T 3qwb_A 218 VDASFDSVGK 227 (334)
T ss_dssp EEEEEECCGG
T ss_pred ceEEEECCCh
Confidence 9999999984
No 385
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.43 E-value=0.00024 Score=63.12 Aligned_cols=76 Identities=21% Similarity=0.144 Sum_probs=51.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH---HHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK---AALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|+++.+++.+.+.. .++ +.. .. .|..+. +.+.+.....+
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~----Ga~-~~--~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA----KAL----GAW-ET--IDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HHH----TCS-EE--EETTTSCHHHHHHHHTTTCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHc----CCC-EE--EeCCCccHHHHHHHHhCCCC
Confidence 46899999999999999999999999999998865544332 222 111 12 233332 23334443346
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 210 ~Dvvid~~g~ 219 (325)
T 3jyn_A 210 CPVVYDGVGQ 219 (325)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCh
Confidence 9999999874
No 386
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.43 E-value=0.0013 Score=57.91 Aligned_cols=116 Identities=16% Similarity=0.160 Sum_probs=71.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|.|+| +|.+|..++..|++.| ++|++++|+..+.+.....+.+........+.....| . +.++ ++|
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~--~aD 71 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALA--DAD 71 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGT--TCS
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhC--CCC
Confidence 7899999 8999999999999999 8999999876555443333322111111123332223 2 2355 589
Q ss_pred EEEEccccccCC--ccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEec
Q 040584 81 AVIHFAGLKAVG--ESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSS 128 (347)
Q Consensus 81 ~vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~S 128 (347)
+||-+++..... .......+....|+.....+++.+.+.... .+|.+|
T Consensus 72 vViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t 122 (309)
T 1hyh_A 72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 999998864310 001122345667888888888888775433 444433
No 387
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.42 E-value=0.00023 Score=66.14 Aligned_cols=40 Identities=28% Similarity=0.389 Sum_probs=34.9
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHH
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEI 41 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 41 (347)
|+|+|.|+| .|++|..++..|++.|++|++++|++.+.+.
T Consensus 1 M~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~ 40 (450)
T 3gg2_A 1 MSLDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQ 40 (450)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHH
Confidence 779999999 7999999999999999999999988665443
No 388
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.42 E-value=0.00011 Score=66.10 Aligned_cols=95 Identities=16% Similarity=0.222 Sum_probs=55.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCe---EEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYK---TVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
|+++|.|.||||++|..|++.|.++++. +..+........... + .+....+...| .+ .+.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-----~---~~~~~~~~~~~---~~----~~~-- 63 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-----F---KDQDITIEETT---ET----AFE-- 63 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-----E---TTEEEEEEECC---TT----TTT--
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-----e---cCCCceEeeCC---HH----Hhc--
Confidence 8899999999999999999999987663 344432222110000 0 00111222222 11 133
Q ss_pred CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 78 KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
++|+||.+++... +..++..+.+.|+ ++|=.|+..
T Consensus 64 ~~Dvvf~a~~~~~------------------s~~~a~~~~~~G~-~vIDlSa~~ 98 (366)
T 3pwk_A 64 GVDIALFSAGSST------------------SAKYAPYAVKAGV-VVVDNTSYF 98 (366)
T ss_dssp TCSEEEECSCHHH------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCCEEEECCChHh------------------HHHHHHHHHHCCC-EEEEcCCcc
Confidence 6999999986321 3345566666777 788888864
No 389
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.41 E-value=0.00037 Score=60.51 Aligned_cols=78 Identities=21% Similarity=0.305 Sum_probs=56.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+++++|+|+ |.+|+.++..|.+.|. +|+++.|+.++.+.+.+.+..... .+.....++. ++.+.+. ++|
T Consensus 127 ~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~----~~~i~~~~~~---~l~~~l~--~~D 196 (283)
T 3jyo_A 127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG----REAVVGVDAR---GIEDVIA--AAD 196 (283)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT----SCCEEEECST---THHHHHH--HSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC----CceEEEcCHH---HHHHHHh--cCC
Confidence 478999997 8999999999999998 799999987777666666554321 2233333433 3455666 489
Q ss_pred EEEEccccc
Q 040584 81 AVIHFAGLK 89 (347)
Q Consensus 81 ~vih~a~~~ 89 (347)
+||++....
T Consensus 197 iVInaTp~G 205 (283)
T 3jyo_A 197 GVVNATPMG 205 (283)
T ss_dssp EEEECSSTT
T ss_pred EEEECCCCC
Confidence 999998654
No 390
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=97.41 E-value=0.00015 Score=57.26 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=52.7
Q ss_pred CCcccHHHHHHHHhCCCeEEEEeCCCchhH---HHHHHHHHhhccCCCCeEEEecCCCCH--HHHHHHHcc----CCCcE
Q 040584 11 VGYIGSHTVLQLLLGGYKTVVVDNLDNASE---IAVAKVKELAGYQGNNMTFHKLDLRDK--AALEVVFAG----TKFDA 81 (347)
Q Consensus 11 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~----~~~d~ 81 (347)
+|+++...++.|.+.|++|++..|+..... ...+.+... +.+...+.+|++++ +++.++++. .+-|+
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~----G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dV 100 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA----GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDV 100 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT----TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCE
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc----CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCE
Confidence 568999999999999999998877654321 112223222 34566778999998 887776542 33499
Q ss_pred EEEccccc
Q 040584 82 VIHFAGLK 89 (347)
Q Consensus 82 vih~a~~~ 89 (347)
+|||||..
T Consensus 101 LVnnAgg~ 108 (157)
T 3gxh_A 101 LVHCLANY 108 (157)
T ss_dssp EEECSBSH
T ss_pred EEECCCCC
Confidence 99999853
No 391
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.40 E-value=0.00039 Score=62.23 Aligned_cols=76 Identities=18% Similarity=0.170 Sum_probs=52.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH---HHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK---AALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|+++++++.+.+...+ + +... . .|..+. +.+.+.....+
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l----ga~~-~--~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----L----GAAY-V--IDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H----TCSE-E--EETTTSCHHHHHHHHTTTSC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----C----CCcE-E--EeCCcccHHHHHHHHhCCCC
Confidence 3689999999999999999999999999999988776544322 2 1111 2 233332 23333333337
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 214 ~Dvvid~~g~ 223 (340)
T 3gms_A 214 ADAAIDSIGG 223 (340)
T ss_dssp EEEEEESSCH
T ss_pred CcEEEECCCC
Confidence 9999999984
No 392
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.40 E-value=0.00035 Score=62.41 Aligned_cols=69 Identities=14% Similarity=0.092 Sum_probs=56.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHH-HccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVV-FAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~ 81 (347)
++++|+|+ |.+|+.+++.|.++|+ |++++++++..+ .. + .++..+.+|.+|++.++++ ++ ++|.
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~------~~~~~i~gd~~~~~~L~~a~i~--~a~~ 180 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R------SGANFVHGDPTRVSDLEKANVR--GARA 180 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H------TTCEEEESCTTSHHHHHHTCST--TEEE
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h------CCcEEEEeCCCCHHHHHhcChh--hccE
Confidence 48999995 9999999999999999 999987665443 21 1 3678999999999999887 55 6899
Q ss_pred EEEcc
Q 040584 82 VIHFA 86 (347)
Q Consensus 82 vih~a 86 (347)
||-+.
T Consensus 181 vi~~~ 185 (336)
T 1lnq_A 181 VIVDL 185 (336)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 98875
No 393
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.39 E-value=0.0019 Score=55.06 Aligned_cols=109 Identities=23% Similarity=0.287 Sum_probs=68.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCC-------------------chhHHHHHHHHHhhccCCCCeEEEe
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLD-------------------NASEIAVAKVKELAGYQGNNMTFHK 61 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (347)
..+|+|.|+ |.+|+++++.|...|. +++++++.. .+.+...+.+..+.+ .-++..+.
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--~~~v~~~~ 104 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP--DIQLTALQ 104 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT--TSEEEEEC
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC--CCEEEEEe
Confidence 368999995 6699999999999997 566664432 344444555554422 12344444
Q ss_pred cCCCCHHHHHHHHccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccC
Q 040584 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYG 134 (347)
Q Consensus 62 ~Dl~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg 134 (347)
.++. .+.+.++++ ++|+||.+.. |...-..+.++|.+.++ .+|+.+....+|
T Consensus 105 ~~~~-~~~~~~~~~--~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~~-p~i~~~~~g~~G 156 (251)
T 1zud_1 105 QRLT-GEALKDAVA--RADVVLDCTD-----------------NMATRQEINAACVALNT-PLITASAVGFGG 156 (251)
T ss_dssp SCCC-HHHHHHHHH--HCSEEEECCS-----------------SHHHHHHHHHHHHHTTC-CEEEEEEEBTEE
T ss_pred ccCC-HHHHHHHHh--cCCEEEECCC-----------------CHHHHHHHHHHHHHhCC-CEEEEeccccce
Confidence 4443 456777777 5899999853 12222345667777765 577776654443
No 394
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.39 E-value=0.00063 Score=59.80 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=55.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCC---CchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNL---DNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
+++++|+|+ |..|+.++..|.+.|. +|+++.|+ ..+.+.+.+.+.... .......++.+.+.+.+.+.
T Consensus 148 gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-----~~~v~~~~~~~l~~~~~~l~-- 219 (312)
T 3t4e_A 148 GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-----DCVVTVTDLADQHAFTEALA-- 219 (312)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-----SCEEEEEETTCHHHHHHHHH--
T ss_pred CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-----CcceEEechHhhhhhHhhcc--
Confidence 478999996 8999999999999998 89999998 444444444443321 22233345555444455566
Q ss_pred CCcEEEEccccc
Q 040584 78 KFDAVIHFAGLK 89 (347)
Q Consensus 78 ~~d~vih~a~~~ 89 (347)
.+|+||++....
T Consensus 220 ~~DiIINaTp~G 231 (312)
T 3t4e_A 220 SADILTNGTKVG 231 (312)
T ss_dssp HCSEEEECSSTT
T ss_pred CceEEEECCcCC
Confidence 489999997654
No 395
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.38 E-value=0.00021 Score=66.59 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=58.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
.|+|+|.| .|-+|++|++.|.++||+|+++++++.....+.+. -.+..+.+|-++++.++++=-+ .+|.
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~---------~~~~~i~Gd~~~~~~L~~Agi~-~ad~ 71 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK---------YDLRVVNGHASHPDVLHEAGAQ-DADM 71 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH---------SSCEEEESCTTCHHHHHHHTTT-TCSE
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---------cCcEEEEEcCCCHHHHHhcCCC-cCCE
Confidence 48999999 69999999999999999999999875554333222 1567899999999999988433 6898
Q ss_pred EEEc
Q 040584 82 VIHF 85 (347)
Q Consensus 82 vih~ 85 (347)
+|-+
T Consensus 72 ~ia~ 75 (461)
T 4g65_A 72 LVAV 75 (461)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8755
No 396
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.38 E-value=0.00041 Score=62.39 Aligned_cols=75 Identities=19% Similarity=0.321 Sum_probs=51.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH---HHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK---AALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|+++++++.+.+.. .++ +.. .. .|..+. +.+.++. ..+
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~l----Ga~-~~--~~~~~~~~~~~~~~~~-~~g 235 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC----ERL----GAK-RG--INYRSEDFAAVIKAET-GQG 235 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHH----TCS-EE--EETTTSCHHHHHHHHH-SSC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----Hhc----CCC-EE--EeCCchHHHHHHHHHh-CCC
Confidence 36899999999999999999999999999999876554432 222 111 12 233332 2333333 337
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 236 ~Dvvid~~g~ 245 (353)
T 4dup_A 236 VDIILDMIGA 245 (353)
T ss_dssp EEEEEESCCG
T ss_pred ceEEEECCCH
Confidence 9999999974
No 397
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.37 E-value=0.00054 Score=61.36 Aligned_cols=77 Identities=25% Similarity=0.312 Sum_probs=51.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH-HHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK-AALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~d 80 (347)
+++|+|+||+|.+|..+++.+...|++|+++.+++.+.+... ++ +.. ..+..+ .+. +.+.++....++|
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~----ga~-~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK----SV----GAD-IVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HH----TCS-EEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hc----CCc-EEecCc-hhHHHHHHHHhCCCCce
Confidence 368999999999999999999999999999998776654322 22 111 222223 222 2333333333699
Q ss_pred EEEEcccc
Q 040584 81 AVIHFAGL 88 (347)
Q Consensus 81 ~vih~a~~ 88 (347)
+||+++|.
T Consensus 230 vvid~~g~ 237 (342)
T 4eye_A 230 MVVDPIGG 237 (342)
T ss_dssp EEEESCC-
T ss_pred EEEECCch
Confidence 99999974
No 398
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=97.35 E-value=0.00036 Score=62.55 Aligned_cols=76 Identities=14% Similarity=0.192 Sum_probs=50.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH----HHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK----AALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~~~ 77 (347)
+++|+|+||+|.+|..+++.+...|++|+++++++.+.+...+ ++ +... ..|..+. +.+.++.. .
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~------g~~~-~~d~~~~~~~~~~~~~~~~-~ 224 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KF------GFDD-AFNYKEESDLTAALKRCFP-N 224 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TS------CCSE-EEETTSCSCSHHHHHHHCT-T
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hc------CCce-EEecCCHHHHHHHHHHHhC-C
Confidence 4689999999999999999999999999999886544332211 11 1111 1244432 22333322 2
Q ss_pred CCcEEEEcccc
Q 040584 78 KFDAVIHFAGL 88 (347)
Q Consensus 78 ~~d~vih~a~~ 88 (347)
++|+||+++|.
T Consensus 225 ~~d~vi~~~g~ 235 (345)
T 2j3h_A 225 GIDIYFENVGG 235 (345)
T ss_dssp CEEEEEESSCH
T ss_pred CCcEEEECCCH
Confidence 69999999873
No 399
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.34 E-value=0.00027 Score=63.56 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=58.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
++|+|.||+|.+|+.+++.|.+.. .+++++.+..+......+....+. ..+ ..|+.-.+ .+.+. ++|+
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~----~~v---~~dl~~~~--~~~~~--~vDv 85 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLR----AQK---LPTLVSVK--DADFS--TVDA 85 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGT----TSC---CCCCBCGG--GCCGG--GCSE
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhc----Ccc---cccceecc--hhHhc--CCCE
Confidence 589999999999999999999875 488777654333221111111111 111 12332222 23344 5999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
||.+++... +...+..+ +.|+ ++|-.|+..
T Consensus 86 Vf~atp~~~------------------s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 86 VFCCLPHGT------------------TQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp EEECCCTTT------------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred EEEcCCchh------------------HHHHHHHH-hCCC-EEEECCccc
Confidence 999986432 22455556 6666 688888754
No 400
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.33 E-value=0.0019 Score=56.85 Aligned_cols=115 Identities=19% Similarity=0.140 Sum_probs=71.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||.|+|+ |.+|..++..|++. |++|++++++..+.+.....+.+..........+... .|. .. ++ ++|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~--~aD 71 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TA--NSD 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HC--CCC
Confidence 58999997 99999999999985 7999999998776553322222110000111122111 122 22 45 589
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEec
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSS 128 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~S 128 (347)
+||-+++.... ......+.+..|+.....+++.+.+.... .+|.++
T Consensus 72 vViiav~~p~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 72 IVIITAGLPRK--PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp EEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred EEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 99999975321 11123456667888888888888776433 555554
No 401
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=97.33 E-value=0.0029 Score=54.93 Aligned_cols=106 Identities=17% Similarity=0.221 Sum_probs=69.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCC------------------chhHHHHHHHHHhhccCCCCeEEEecC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLD------------------NASEIAVAKVKELAGYQGNNMTFHKLD 63 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (347)
.+|+|.| .|.+|+.+++.|...|. ++++++... .+.+...+.+..+.+ .-+++.+..+
T Consensus 37 ~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP--~v~v~~~~~~ 113 (292)
T 3h8v_A 37 FAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP--DVLFEVHNYN 113 (292)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT--TSEEEEECCC
T ss_pred CeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC--CcEEEEeccc
Confidence 5899999 78899999999999985 566666544 344445555555532 2345556667
Q ss_pred CCCHHHHHHHHcc---------CCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 64 LRDKAALEVVFAG---------TKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 64 l~d~~~~~~~~~~---------~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
+.+.+.+..+++. .++|+||.+.. |...-..+-++|.+.++ .+|+.+.
T Consensus 114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-----------------n~~~R~~in~~c~~~~~-Pli~~gv 170 (292)
T 3h8v_A 114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-----------------NFEARMTINTACNELGQ-TWMESGV 170 (292)
T ss_dssp TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-----------------SHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred CCcHHHHHHHhhhhcccccccCCCCCEEEECCc-----------------chhhhhHHHHHHHHhCC-CEEEeee
Confidence 7766666666520 16899998852 33333456677888776 5666554
No 402
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.33 E-value=7.7e-05 Score=57.92 Aligned_cols=71 Identities=17% Similarity=0.259 Sum_probs=50.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
.++|+|+|+ |.+|+.+++.|.+.|++|++.+|+..+.+...+.+ +..... . +++.+++. ++|+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~---------~~~~~~--~---~~~~~~~~--~~Di 83 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY---------EYEYVL--I---NDIDSLIK--NNDV 83 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH---------TCEEEE--C---SCHHHHHH--TCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh---------CCceEe--e---cCHHHHhc--CCCE
Confidence 479999995 99999999999999999889998766554433322 122221 2 23455666 5899
Q ss_pred EEEccccc
Q 040584 82 VIHFAGLK 89 (347)
Q Consensus 82 vih~a~~~ 89 (347)
||.+.+..
T Consensus 84 vi~at~~~ 91 (144)
T 3oj0_A 84 IITATSSK 91 (144)
T ss_dssp EEECSCCS
T ss_pred EEEeCCCC
Confidence 99998643
No 403
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.30 E-value=0.002 Score=57.02 Aligned_cols=114 Identities=14% Similarity=0.054 Sum_probs=69.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhc--cCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAG--YQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|+|.|+|+ |.+|..++..|++.|+ +|++++++....+.....+..... ....++.. ..| + +.++ ++
T Consensus 5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~a~~--~a 73 (317)
T 2ewd_A 5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDD------Y-ADIS--GS 73 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCC------H-HHhC--CC
Confidence 68999997 9999999999999998 999999987655442211111100 00112221 122 2 3455 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||-+++..... .....+....|....+.+++.+.+.... .+|.+|.
T Consensus 74 DiVi~avg~p~~~--g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 74 DVVIITASIPGRP--KDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp SEEEECCCCSSCC--SSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred CEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 9999999864321 1122334455777777788777765323 4555554
No 404
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.30 E-value=0.00024 Score=63.62 Aligned_cols=98 Identities=16% Similarity=0.072 Sum_probs=58.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|++|.|.||+|.+|+.+++.|++.. .+++++.+..+.... +....+... +. ....+.+.+ + +. ++|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~----~~~~~~~~~-g~--~~~~~~~~~---~-~~--~vD 70 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEP----VHFVHPNLR-GR--TNLKFVPPE---K-LE--PAD 70 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSB----GGGTCGGGT-TT--CCCBCBCGG---G-CC--CCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCch----hHHhCchhc-Cc--ccccccchh---H-hc--CCC
Confidence 3689999999999999999999875 488777654332211 111000000 00 001122322 2 34 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
+||.+++... ...++..+.+.|+ ++|-.|+..
T Consensus 71 vV~~a~g~~~------------------s~~~a~~~~~aG~-~VId~Sa~~ 102 (345)
T 2ozp_A 71 ILVLALPHGV------------------FAREFDRYSALAP-VLVDLSADF 102 (345)
T ss_dssp EEEECCCTTH------------------HHHTHHHHHTTCS-EEEECSSTT
T ss_pred EEEEcCCcHH------------------HHHHHHHHHHCCC-EEEEcCccc
Confidence 9999986421 2345566666776 688888864
No 405
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.29 E-value=0.00056 Score=60.80 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=59.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCC---chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLD---NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
|++|+|.||||++|+.|++.|.+. ++++..+.+++ ...+...+..+.+.+. ....+... .+.+ ++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~--~~~~v~~~--~~~~---~~~~-- 74 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGI--VELPLQPM--SDIS---EFSP-- 74 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTT--CCCBEEEE--SSGG---GTCT--
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCc--cceeEecc--CCHH---HHhc--
Confidence 378999999999999999999984 67887664433 2222222222222110 01222221 0122 2223
Q ss_pred CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 78 KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
++|+||.|.+.. .+..++..+.+.|+ ++|-.|+..
T Consensus 75 ~~Dvvf~a~p~~------------------~s~~~~~~~~~~g~-~vIDlSa~f 109 (337)
T 3dr3_A 75 GVDVVFLATAHE------------------VSHDLAPQFLEAGC-VVFDLSGAF 109 (337)
T ss_dssp TCSEEEECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCCEEEECCChH------------------HHHHHHHHHHHCCC-EEEEcCCcc
Confidence 699999887532 12345666667777 788888864
No 406
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=97.25 E-value=0.00061 Score=61.12 Aligned_cols=75 Identities=25% Similarity=0.319 Sum_probs=51.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHc-c
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFA-G 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~-~ 76 (347)
+++|+|+||+|.+|..+++.+... |++|+++++++.+.+.. .++ +... . .|..+.+ .+.++.. .
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~----~~~----g~~~-~--~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA----KRA----GADY-V--INASMQDPLAEIRRITESK 239 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH----HHH----TCSE-E--EETTTSCHHHHHHHHTTTS
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHh----CCCE-E--ecCCCccHHHHHHHHhcCC
Confidence 368999999999999999999998 99999998875544322 222 1111 1 2444333 2444443 3
Q ss_pred CCCcEEEEcccc
Q 040584 77 TKFDAVIHFAGL 88 (347)
Q Consensus 77 ~~~d~vih~a~~ 88 (347)
++|+||+++|.
T Consensus 240 -~~d~vi~~~g~ 250 (347)
T 1jvb_A 240 -GVDAVIDLNNS 250 (347)
T ss_dssp -CEEEEEESCCC
T ss_pred -CceEEEECCCC
Confidence 69999999984
No 407
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.23 E-value=0.0026 Score=56.02 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=74.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC--CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG--YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|||.|+|| |.+|..++..|+..+ .++.++++...+.+.....+.+... ....+.+.. + +. ++++ ++|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~-~~~~~~v~~-~--~~----~a~~--~aD 69 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP-FAHPVWVWA-G--SY----GDLE--GAR 69 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG-GSCCCEEEE-C--CG----GGGT--TEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh-hcCCeEEEE-C--CH----HHhC--CCC
Confidence 68999997 999999999999987 6899998875544433333332211 112333332 2 22 3355 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+||..++..... .....+....|+.....+++.+.+.... .+|.+|.
T Consensus 70 ~Vii~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 70 AVVLAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp EEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 999999865321 1223456777888899999988887533 5666543
No 408
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.21 E-value=0.0036 Score=55.29 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=69.1
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
++|+|.|+|+ |.+|..++..|++.|+ +|++++|+....+.....+.+-.. .......... .+. +.++ +
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~--~~~----~~~~--~ 75 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS-FYPTVSIDGS--DDP----EICR--D 75 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG-GSTTCEEEEE--SCG----GGGT--T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh-hcCCeEEEeC--CCH----HHhC--C
Confidence 3579999997 9999999999999999 999999875433211111111111 0112222222 122 2344 5
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
+|+||-+++..... .....+....|+.....+++.+++.....+|...+
T Consensus 76 aD~Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~ 124 (319)
T 1lld_A 76 ADMVVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 124 (319)
T ss_dssp CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 89999999754321 12234566678887778888777654333443333
No 409
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.20 E-value=0.011 Score=49.97 Aligned_cols=157 Identities=13% Similarity=0.134 Sum_probs=88.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH---ccCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF---AGTK 78 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~~ 78 (347)
|+|.|.|++|.+|+.+++.+.+. ++++.++.......+.... .... +..|.+.++...+.+ .+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----------~~~D-vvIDfT~p~a~~~~~~~a~~~g 69 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----------GNTE-VVIDFTHPDVVMGNLEFLIDNG 69 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----------TTCC-EEEECSCTTTHHHHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----------cCCc-EEEEccChHHHHHHHHHHHHcC
Confidence 58999999999999999999875 8999865543332222111 0122 345666655444332 2336
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc-CCCeEEEeccccccCC-------------CCCCCCCC-
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH-GCKNLVFSSSATAYGW-------------PKVVPCTE- 143 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~~yg~-------------~~~~~~~e- 143 (347)
+++|+=..|... +-...+.++|++. ++ .+++.++.+. |. -++--+.|
T Consensus 70 ~~~VigTTG~~~----------------e~~~~l~~aa~~~~~~-~vv~a~N~si-Gv~ll~~l~~~aa~~~~dieIiE~ 131 (245)
T 1p9l_A 70 IHAVVGTTGFTA----------------ERFQQVESWLVAKPNT-SVLIAPNFAI-GAVLSMHFAKQAARFFDSAEVIEL 131 (245)
T ss_dssp CEEEECCCCCCH----------------HHHHHHHHHHHTSTTC-EEEECSCCCH-HHHHHHHHHHHHGGGCSEEEEEEE
T ss_pred CCEEEcCCCCCH----------------HHHHHHHHHHHhCCCC-CEEEECCccH-HHHHHHHHHHHHHhhcCCEEEEEC
Confidence 788776655321 1112345555544 44 5666555432 10 00000112
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHHhh----------------h--cCCceEEEeecccccCCC
Q 040584 144 EFPLQAMNPYGRSKLFIEEICRDVHR----------------S--DSEWKIILLRYFNPVGAH 188 (347)
Q Consensus 144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~----------------~--~~~~~~~~lR~~~v~G~~ 188 (347)
+...+.-.|.|.++..+|.+...... . ..++.+..+|.|.+.|-|
T Consensus 132 HH~~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h 194 (245)
T 1p9l_A 132 HHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQ 194 (245)
T ss_dssp ECTTCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEE
T ss_pred cccCCCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEE
Confidence 22333344678888888887643210 0 026788999999999864
No 410
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.19 E-value=0.0028 Score=56.01 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=70.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|.|+|+ |.+|..++..|++.|+ +|++++++....+.....+.+... ......+.. .|. +.++ ++|
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~---~d~----~~~~--~aD 69 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FTRRANIYA---GDY----ADLK--GSD 69 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GSCCCEEEE---CCG----GGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hcCCcEEEe---CCH----HHhC--CCC
Confidence 58999997 9999999999999999 999999876554433322222111 011122222 232 2345 699
Q ss_pred EEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEec
Q 040584 81 AVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSS 128 (347)
Q Consensus 81 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~S 128 (347)
+||-+++..... .....+....|+.....+++.+.+.... .+|.+|
T Consensus 70 vViiav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t 116 (319)
T 1a5z_A 70 VVIVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp EEEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 999999854321 1122345666888888888888776433 455544
No 411
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.18 E-value=0.00049 Score=60.28 Aligned_cols=75 Identities=21% Similarity=0.222 Sum_probs=52.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+++|+|+|+ |.+|+.++..|++.|+ +|+++.|+..+.+.+.+.+. .... +..+.+++.+.+. ++|
T Consensus 141 ~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~-------~~~~----~~~~~~~~~~~~~--~aD 206 (297)
T 2egg_A 141 GKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGD-------ERRS----AYFSLAEAETRLA--EYD 206 (297)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSC-------SSSC----CEECHHHHHHTGG--GCS
T ss_pred CCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhh-------hccC----ceeeHHHHHhhhc--cCC
Confidence 478999996 7899999999999998 89999987655544333221 1000 1123355666676 589
Q ss_pred EEEEcccccc
Q 040584 81 AVIHFAGLKA 90 (347)
Q Consensus 81 ~vih~a~~~~ 90 (347)
+||++.+...
T Consensus 207 ivIn~t~~~~ 216 (297)
T 2egg_A 207 IIINTTSVGM 216 (297)
T ss_dssp EEEECSCTTC
T ss_pred EEEECCCCCC
Confidence 9999998654
No 412
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.18 E-value=0.00042 Score=62.57 Aligned_cols=74 Identities=16% Similarity=0.233 Sum_probs=53.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
++|+|+|+ |.+|+.+++.|...|.+|++++|++.+.+...+.. . ..+..+ ..+.+++.+.+. ++|+|
T Consensus 168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~----~---~~~~~~---~~~~~~~~~~~~--~~DvV 234 (361)
T 1pjc_A 168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF----G---SRVELL---YSNSAEIETAVA--EADLL 234 (361)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----G---GGSEEE---ECCHHHHHHHHH--TCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh----C---ceeEee---eCCHHHHHHHHc--CCCEE
Confidence 68999998 99999999999999999999999866554433221 1 112121 134556777776 58999
Q ss_pred EEccccc
Q 040584 83 IHFAGLK 89 (347)
Q Consensus 83 ih~a~~~ 89 (347)
|++++..
T Consensus 235 I~~~~~~ 241 (361)
T 1pjc_A 235 IGAVLVP 241 (361)
T ss_dssp EECCCCT
T ss_pred EECCCcC
Confidence 9998753
No 413
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.18 E-value=0.00087 Score=57.69 Aligned_cols=97 Identities=21% Similarity=0.252 Sum_probs=56.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CCeEEE-EeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GYKTVV-VDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
|++|.|+||+|.+|+.+++.+.+. ++++.+ ++|+..... -..+..+.+ ... ++.-.+++.+++. ++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~--G~d~gel~g-----~~~---gv~v~~dl~~ll~--~~ 74 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQL--GQDAGAFLG-----KQT---GVALTDDIERVCA--EA 74 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTT--TSBTTTTTT-----CCC---SCBCBCCHHHHHH--HC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccc--cccHHHHhC-----CCC---CceecCCHHHHhc--CC
Confidence 479999999999999999999875 678876 455533210 000000000 000 1111234556666 48
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSA 130 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~ 130 (347)
|+||+++.+ ..+...++.|.+.|+ ++| ++|+
T Consensus 75 DVVIDfT~p------------------~a~~~~~~~al~~G~-~vV-igTT 105 (272)
T 4f3y_A 75 DYLIDFTLP------------------EGTLVHLDAALRHDV-KLV-IGTT 105 (272)
T ss_dssp SEEEECSCH------------------HHHHHHHHHHHHHTC-EEE-ECCC
T ss_pred CEEEEcCCH------------------HHHHHHHHHHHHcCC-CEE-EECC
Confidence 999999632 123356677777776 555 4443
No 414
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.14 E-value=0.00044 Score=57.58 Aligned_cols=65 Identities=14% Similarity=0.119 Sum_probs=46.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|.|+| +|.+|+.+++.|.+.|++|++++|+..+.+. +. ..++... ++.++++ ++|+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~----~~------~~g~~~~--------~~~~~~~--~~Dv 86 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR----LF------PSAAQVT--------FQEEAVS--SPEV 86 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH----HS------BTTSEEE--------EHHHHTT--SCSE
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HH------HcCCcee--------cHHHHHh--CCCE
Confidence 47899999 8999999999999999999999887543321 11 1133321 2445666 5899
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
||.+..
T Consensus 87 Vi~av~ 92 (215)
T 2vns_A 87 IFVAVF 92 (215)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 998875
No 415
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.14 E-value=0.00048 Score=61.94 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=29.1
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDN 34 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r 34 (347)
|+++|.|.||+|++|+.+++.|++.. .+|.++.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~ 41 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAA 41 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 55799999999999999999998764 68877764
No 416
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.14 E-value=0.0008 Score=60.36 Aligned_cols=75 Identities=19% Similarity=0.352 Sum_probs=49.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH---HHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA---ALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~ 77 (347)
+.+|+|+|+ |.+|..+++.+...|+ +|+++++++.+.+. +.++ +...+ .|..+.+ .+.++....
T Consensus 168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~----~~~~------Ga~~~-~~~~~~~~~~~v~~~~~g~ 235 (348)
T 2d8a_A 168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL----AKKV------GADYV-INPFEEDVVKEVMDITDGN 235 (348)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH----HHHH------TCSEE-ECTTTSCHHHHHHHHTTTS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHh------CCCEE-ECCCCcCHHHHHHHHcCCC
Confidence 468999999 9999999999999999 99999887544332 2222 11211 2443322 233333323
Q ss_pred CCcEEEEcccc
Q 040584 78 KFDAVIHFAGL 88 (347)
Q Consensus 78 ~~d~vih~a~~ 88 (347)
++|+||+++|.
T Consensus 236 g~D~vid~~g~ 246 (348)
T 2d8a_A 236 GVDVFLEFSGA 246 (348)
T ss_dssp CEEEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999873
No 417
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.14 E-value=0.0014 Score=59.03 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=61.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC--H-HHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD--K-AALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~-~~~~~~~~~~~ 78 (347)
+++|+|+||+|.+|..+++.+...|++|+++.+++.+.+. +.++ +...+ .|..+ . +.+.+.. ..+
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~----~~~~------Ga~~~-~~~~~~~~~~~~~~~~-~~g 231 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF----LKSL------GCDRP-INYKTEPVGTVLKQEY-PEG 231 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHT------TCSEE-EETTTSCHHHHHHHHC-TTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH----HHHc------CCcEE-EecCChhHHHHHHHhc-CCC
Confidence 3689999999999999999999999999999886544332 2222 11111 23332 2 1222222 226
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
+|+||+++|.. .....++.++.. +++|.+++..
T Consensus 232 ~D~vid~~g~~------------------~~~~~~~~l~~~--G~iv~~g~~~ 264 (362)
T 2c0c_A 232 VDVVYESVGGA------------------MFDLAVDALATK--GRLIVIGFIS 264 (362)
T ss_dssp EEEEEECSCTH------------------HHHHHHHHEEEE--EEEEECCCGG
T ss_pred CCEEEECCCHH------------------HHHHHHHHHhcC--CEEEEEeCCC
Confidence 99999998731 112334444433 3899888754
No 418
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=97.12 E-value=0.00086 Score=62.36 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=33.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS 39 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 39 (347)
+++|+|+||+|.+|...++.+...|.+|+++.+++.+.
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~ 258 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 36899999999999999999999999999988755443
No 419
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.12 E-value=0.0034 Score=55.15 Aligned_cols=114 Identities=17% Similarity=0.208 Sum_probs=74.8
Q ss_pred eEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEe-cCCCCHHHHHHHHccCCCcE
Q 040584 4 NILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHK-LDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 4 ~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||.|+|| |.+|..++..|+..|. +|.++++...+.+.....+.+..........+.. .| . ++++ ++|+
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a~~--~aD~ 70 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---Y----EDMR--GSDI 70 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---G----GGGT--TCSE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---H----HHhC--CCCE
Confidence 6899998 9999999999998887 7999998876655433333322110111222322 23 2 3465 6999
Q ss_pred EEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 82 VIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 82 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
||-.++..... .....+....|+.....+++.+.+.... .+|.+|.
T Consensus 71 Vi~~ag~~~k~--G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 71 VLVTAGIGRKP--GMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp EEECCSCCCCS--SCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 99999865421 2233456777888899999988876433 6666654
No 420
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.11 E-value=0.00045 Score=60.86 Aligned_cols=39 Identities=28% Similarity=0.406 Sum_probs=32.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhH
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASE 40 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 40 (347)
|||+|.|+| .|.+|+.++..|.+.|++|++++|++...+
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~ 40 (316)
T 2ew2_A 2 NAMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIE 40 (316)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence 468999999 599999999999999999999988755443
No 421
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.10 E-value=0.00013 Score=63.72 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=50.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++++|+|++ .+|+.+++.|++.| +|++++|+..+.+...+.+..... ... .+.+|+.+. .+.+. ++|+
T Consensus 128 ~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~---~~~-~~~~d~~~~---~~~~~--~~Di 196 (287)
T 1nvt_A 128 DKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN---KKF-GEEVKFSGL---DVDLD--GVDI 196 (287)
T ss_dssp SCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT---CCH-HHHEEEECT---TCCCT--TCCE
T ss_pred CCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc---ccc-ceeEEEeeH---HHhhC--CCCE
Confidence 4789999975 99999999999999 999999876655554444432110 000 011222221 22233 5999
Q ss_pred EEEcccccc
Q 040584 82 VIHFAGLKA 90 (347)
Q Consensus 82 vih~a~~~~ 90 (347)
||++++...
T Consensus 197 lVn~ag~~~ 205 (287)
T 1nvt_A 197 IINATPIGM 205 (287)
T ss_dssp EEECSCTTC
T ss_pred EEECCCCCC
Confidence 999998654
No 422
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.08 E-value=0.0022 Score=55.20 Aligned_cols=72 Identities=17% Similarity=0.279 Sum_probs=49.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+++++|+|+ |.+|+.++..|.+.|. +|+++.|+.++.+.+.+.+.. ..+..+. +.+ +.. . ++|
T Consensus 120 ~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~------~~~~~~~--~~~---l~~--~--~~D 183 (272)
T 3pwz_A 120 NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH------SRLRISR--YEA---LEG--Q--SFD 183 (272)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC------TTEEEEC--SGG---GTT--C--CCS
T ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc------CCeeEee--HHH---hcc--c--CCC
Confidence 478999996 8899999999999996 899999987666555444321 1233332 222 111 2 689
Q ss_pred EEEEccccc
Q 040584 81 AVIHFAGLK 89 (347)
Q Consensus 81 ~vih~a~~~ 89 (347)
+||++....
T Consensus 184 ivInaTp~g 192 (272)
T 3pwz_A 184 IVVNATSAS 192 (272)
T ss_dssp EEEECSSGG
T ss_pred EEEECCCCC
Confidence 999997654
No 423
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=97.06 E-value=0.0015 Score=58.42 Aligned_cols=74 Identities=24% Similarity=0.296 Sum_probs=49.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH-HHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK-AALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~d 80 (347)
+.+|||+||+|.+|..+++.+...|++|+++ +++.+.+ .+.++ +...+. +-.+. +.+.+.....++|
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~----~~~~l------Ga~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE----YVRDL------GATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH----HHHHH------TSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH----HHHHc------CCCEec-cCCCHHHHHHHHhcCCCce
Confidence 3689999999999999999999999999988 5444332 22333 223322 22222 2333444434799
Q ss_pred EEEEccc
Q 040584 81 AVIHFAG 87 (347)
Q Consensus 81 ~vih~a~ 87 (347)
+||+++|
T Consensus 219 ~vid~~g 225 (343)
T 3gaz_A 219 LVYDTLG 225 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999987
No 424
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.05 E-value=0.00055 Score=60.59 Aligned_cols=35 Identities=20% Similarity=0.035 Sum_probs=32.9
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCC-CeEEEEeCCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVDNLD 36 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~r~~ 36 (347)
|+|+|.|+| .|.+|..+++.|++.| ++|++.+|++
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 678999999 8999999999999999 9999999876
No 425
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.02 E-value=0.00057 Score=59.51 Aligned_cols=39 Identities=10% Similarity=0.203 Sum_probs=34.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS 39 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 39 (347)
|||+|.|+|+||.+|+.+++.|.+.|++|++.+|++...
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~ 48 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGR 48 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 467999999889999999999999999999998865443
No 426
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.01 E-value=0.0013 Score=58.63 Aligned_cols=73 Identities=22% Similarity=0.196 Sum_probs=49.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH---HHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK---AALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~ 78 (347)
+++|+|+|| |.+|..+++.+...|++|+++++++.+.+. +.++ +... ..|..+. +.+.++. . +
T Consensus 165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~l------Ga~~-~~d~~~~~~~~~~~~~~-~-~ 230 (339)
T 1rjw_A 165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL----AKEL------GADL-VVNPLKEDAAKFMKEKV-G-G 230 (339)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH----HHHT------TCSE-EECTTTSCHHHHHHHHH-S-S
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHC------CCCE-EecCCCccHHHHHHHHh-C-C
Confidence 368999999 779999999999999999999887554432 2222 1221 2355432 2333333 2 7
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 231 ~d~vid~~g~ 240 (339)
T 1rjw_A 231 VHAAVVTAVS 240 (339)
T ss_dssp EEEEEESSCC
T ss_pred CCEEEECCCC
Confidence 9999999873
No 427
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=97.00 E-value=0.0015 Score=57.20 Aligned_cols=36 Identities=25% Similarity=0.503 Sum_probs=30.5
Q ss_pred Cce-EEEE-cCC-----------------CcccHHHHHHHHhCCCeEEEEeCCCc
Q 040584 2 AKN-ILVI-GGV-----------------GYIGSHTVLQLLLGGYKTVVVDNLDN 37 (347)
Q Consensus 2 ~~~-vlIt-Gat-----------------G~iG~~l~~~L~~~g~~v~~~~r~~~ 37 (347)
+++ |||| |+| |-.|.+++++++++|++|+.+.+...
T Consensus 36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 355 8998 666 99999999999999999999887543
No 428
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.00 E-value=0.00074 Score=58.72 Aligned_cols=42 Identities=26% Similarity=0.443 Sum_probs=35.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAK 45 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~ 45 (347)
++|.|+| .|.+|+.+++.|++.|++|++.+|++...+...+.
T Consensus 5 ~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 6899998 69999999999999999999999887765554443
No 429
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.98 E-value=0.003 Score=58.28 Aligned_cols=95 Identities=9% Similarity=0.229 Sum_probs=62.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CC---eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCC--CCHHH-HHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GY---KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL--RDKAA-LEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~-~~~~~ 74 (347)
+++|+|+| .|.+|+.+++.|+++ ++ +|++++......+. .+.. ++.+...++ .|.++ +.+++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~-~~~~---------g~~~~~~~Vdadnv~~~l~aLl 81 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDV-AQQY---------GVSFKLQQITPQNYLEVIGSTL 81 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCH-HHHH---------TCEEEECCCCTTTHHHHTGGGC
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhH-Hhhc---------CCceeEEeccchhHHHHHHHHh
Confidence 46899999 999999999999997 45 68888765443321 1111 345555555 44433 55677
Q ss_pred ccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccc
Q 040584 75 AGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSA 130 (347)
Q Consensus 75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~ 130 (347)
++ .|+|||++-... ...++++|.+.|+ ++ ++++
T Consensus 82 ~~--~DvVIN~s~~~~------------------~l~Im~acleaGv-~Y--lDTa 114 (480)
T 2ph5_A 82 EE--NDFLIDVSIGIS------------------SLALIILCNQKGA-LY--INAA 114 (480)
T ss_dssp CT--TCEEEECCSSSC------------------HHHHHHHHHHHTC-EE--EESS
T ss_pred cC--CCEEEECCcccc------------------CHHHHHHHHHcCC-CE--EECC
Confidence 74 499998763221 3368999999986 44 4544
No 430
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.97 E-value=0.00098 Score=58.47 Aligned_cols=73 Identities=12% Similarity=0.169 Sum_probs=51.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+.+|+|+||+|.+|..+++.+...|++|+++.+++.+.+... ++ +... ..|..+.+++.+.+. ++|+
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~------ga~~-~~~~~~~~~~~~~~~--~~d~ 192 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----AL------GAEE-AATYAEVPERAKAWG--GLDL 192 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HT------TCSE-EEEGGGHHHHHHHTT--SEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hc------CCCE-EEECCcchhHHHHhc--CceE
Confidence 468999999999999999999999999999998766654332 22 1121 134444133444444 7999
Q ss_pred EEEcccc
Q 040584 82 VIHFAGL 88 (347)
Q Consensus 82 vih~a~~ 88 (347)
||+ +|.
T Consensus 193 vid-~g~ 198 (302)
T 1iz0_A 193 VLE-VRG 198 (302)
T ss_dssp EEE-CSC
T ss_pred EEE-CCH
Confidence 999 873
No 431
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.96 E-value=0.0025 Score=57.00 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=50.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC--HHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD--KAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (347)
+.+|+|+||+|.+|...++.+...|++|+++.+++.+.+. +.++ +...+ .|..+ .+.+.++ ...++
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~~l------Ga~~v-i~~~~~~~~~~~~~-~~~g~ 218 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEW----TKKM------GADIV-LNHKESLLNQFKTQ-GIELV 218 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHH----HHHH------TCSEE-ECTTSCHHHHHHHH-TCCCE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhc------CCcEE-EECCccHHHHHHHh-CCCCc
Confidence 3689999999999999999999999999999876554332 2232 11111 12222 2233333 33369
Q ss_pred cEEEEcccc
Q 040584 80 DAVIHFAGL 88 (347)
Q Consensus 80 d~vih~a~~ 88 (347)
|+||+++|.
T Consensus 219 Dvv~d~~g~ 227 (346)
T 3fbg_A 219 DYVFCTFNT 227 (346)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCc
Confidence 999999874
No 432
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.96 E-value=0.0052 Score=55.06 Aligned_cols=77 Identities=23% Similarity=0.275 Sum_probs=49.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecC--CCCHHHHHHHHc---c
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD--LRDKAALEVVFA---G 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~d~~~~~~~~~---~ 76 (347)
+.+|+|+|+ |.+|...++.+...|++|+++++++.+.+. +.++ +.. ..+..+ -...+.+.+... .
T Consensus 169 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~~l----Ga~-~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 169 GTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV----AKNC----GAD-VTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHT----TCS-EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH----HHHh----CCC-EEEcCcccccHHHHHHHHhccccC
Confidence 368999996 999999999999999999888876554432 2222 111 122111 122344555443 2
Q ss_pred CCCcEEEEcccc
Q 040584 77 TKFDAVIHFAGL 88 (347)
Q Consensus 77 ~~~d~vih~a~~ 88 (347)
.++|+||+++|.
T Consensus 239 ~g~D~vid~~g~ 250 (352)
T 1e3j_A 239 DLPNVTIDCSGN 250 (352)
T ss_dssp SCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 369999999873
No 433
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.93 E-value=0.0016 Score=56.96 Aligned_cols=36 Identities=28% Similarity=0.493 Sum_probs=32.9
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD 36 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 36 (347)
|+++|.|+||.|.+|..++..|.+.|++|++++|++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 567899999999999999999999999999998764
No 434
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.92 E-value=0.00071 Score=59.22 Aligned_cols=67 Identities=22% Similarity=0.304 Sum_probs=46.2
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
|+|+|.|+| .|.+|+.+++.|.+.|++|++.+|++.+.+... .. ++.. ..+ +.++++ ++|
T Consensus 4 M~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~----~~------g~~~----~~~---~~~~~~--~~D 63 (299)
T 1vpd_A 4 MTMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI----AA------GAET----AST---AKAIAE--QCD 63 (299)
T ss_dssp --CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HT------TCEE----CSS---HHHHHH--HCS
T ss_pred ccceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH----HC------CCee----cCC---HHHHHh--CCC
Confidence 678999999 799999999999999999999988755433222 11 2221 122 344555 489
Q ss_pred EEEEccc
Q 040584 81 AVIHFAG 87 (347)
Q Consensus 81 ~vih~a~ 87 (347)
+||.+..
T Consensus 64 ~vi~~v~ 70 (299)
T 1vpd_A 64 VIITMLP 70 (299)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9999864
No 435
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.89 E-value=0.012 Score=49.66 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=28.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEE-EeCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLD 36 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~-~~r~~ 36 (347)
|++|.|+|+ |.+|+.+++.+.+.++++.+ ++|..
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~ 37 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP 37 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence 589999999 99999999999998777765 55544
No 436
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.88 E-value=0.00071 Score=57.54 Aligned_cols=67 Identities=22% Similarity=0.179 Sum_probs=48.7
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC----eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY----KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
|+|+|.|+| .|.+|+.+++.|++.|+ +|++.+|++.+.+...+.+ ++.. ..+ ..++++
T Consensus 1 M~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---------g~~~----~~~---~~e~~~- 62 (247)
T 3gt0_A 1 MDKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---------GLTT----TTD---NNEVAK- 62 (247)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---------CCEE----CSC---HHHHHH-
T ss_pred CCCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---------CCEE----eCC---hHHHHH-
Confidence 789999999 99999999999999998 9999998766544332221 2221 122 344555
Q ss_pred CCCcEEEEcc
Q 040584 77 TKFDAVIHFA 86 (347)
Q Consensus 77 ~~~d~vih~a 86 (347)
++|+||-+.
T Consensus 63 -~aDvVilav 71 (247)
T 3gt0_A 63 -NADILILSI 71 (247)
T ss_dssp -HCSEEEECS
T ss_pred -hCCEEEEEe
Confidence 489999986
No 437
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.87 E-value=0.00054 Score=61.03 Aligned_cols=94 Identities=12% Similarity=0.207 Sum_probs=57.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC---CeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG---YKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (347)
|++|.|.||+|.+|+.+++.|++++ .+++++....+.... +. + .+..+.+...| ++ .+. +
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~----~~-~---~~~~i~~~~~~---~~----~~~--~ 65 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT----YR-F---NGKTVRVQNVE---EF----DWS--Q 65 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE----EE-E---TTEEEEEEEGG---GC----CGG--G
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc----ee-e---cCceeEEecCC---hH----Hhc--C
Confidence 5899999999999999999999873 567766532211000 00 0 01122222122 11 233 5
Q ss_pred CcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccc
Q 040584 79 FDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSAT 131 (347)
Q Consensus 79 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (347)
+|+||-|.+... +...+..+.+.|+ ++|-.|+..
T Consensus 66 vDvVf~a~g~~~------------------s~~~a~~~~~~G~-~vId~s~~~ 99 (336)
T 2r00_A 66 VHIALFSAGGEL------------------SAKWAPIAAEAGV-VVIDNTSHF 99 (336)
T ss_dssp CSEEEECSCHHH------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCEEEECCCchH------------------HHHHHHHHHHcCC-EEEEcCCcc
Confidence 899999976421 3356666777777 788888874
No 438
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.87 E-value=0.015 Score=52.22 Aligned_cols=119 Identities=15% Similarity=0.013 Sum_probs=71.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-----eEEEEeCCCchhHH-HHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-----KTVVVDNLDNASEI-AVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-----~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
+||.|+||+|.+|.+++..|+..+. ++.+.+...+.... .....-.+.....+-...+.. .+ ...+.++
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~~--~~y~~~~- 107 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--GI--DPYEVFE- 107 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--ES--CHHHHTT-
T ss_pred CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--ec--CCHHHhC-
Confidence 6899999999999999999998763 26554433333221 111122222111111111111 11 1245566
Q ss_pred CCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHc-C-CCeEEEecc
Q 040584 77 TKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAH-G-CKNLVFSSS 129 (347)
Q Consensus 77 ~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~iv~~SS 129 (347)
++|+||-.||.... ......+.++.|+.-.+.+.+.+.+. + -..++.+|.
T Consensus 108 -daDvVVitag~prk--pG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 108 -DVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp -TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred -CCCEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 69999999996432 22345678899999999999988875 3 236776665
No 439
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=96.87 E-value=0.011 Score=51.59 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=66.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHH-------HHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAK-------VKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
|++|-++| .|-.|..+++.|++.||+|++.+|++++.+.+.+. ..+. -...+++..-+.|.+.+++++
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~----~~~~dvv~~~l~~~~~v~~V~ 77 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDA----VQGADVVISMLPASQHVEGLY 77 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHH----HTTCSEEEECCSCHHHHHHHH
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHH----HhcCCceeecCCchHHHHHHH
Confidence 57899999 99999999999999999999999987665543221 0011 123445555667777777666
Q ss_pred ccC--------CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEE
Q 040584 75 AGT--------KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLV 125 (347)
Q Consensus 75 ~~~--------~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv 125 (347)
... .=++||.+... ....++.+.+.+++.|+ ++|
T Consensus 78 ~~~~g~~~~~~~g~iiId~sT~----------------~p~~~~~~a~~~~~~G~-~~l 119 (300)
T 3obb_A 78 LDDDGLLAHIAPGTLVLECSTI----------------APTSARKIHAAARERGL-AML 119 (300)
T ss_dssp HSSSSSTTSCCC-CEEEECSCC----------------CHHHHHHHHHHHHTTTC-EEE
T ss_pred hchhhhhhcCCCCCEEEECCCC----------------CHHHHHHHHHHHHHcCC-EEE
Confidence 421 11345555422 23345677778877776 555
No 440
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.86 E-value=0.002 Score=58.19 Aligned_cols=74 Identities=22% Similarity=0.232 Sum_probs=53.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+.+|+|+|+ |.+|..+++.+...|++|+++++++.+.+...+ ++ +... ..|..+.+.+.++.. ++|+
T Consensus 188 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~l------Ga~~-v~~~~~~~~~~~~~~--~~D~ 254 (366)
T 1yqd_A 188 GKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NF------GADS-FLVSRDQEQMQAAAG--TLDG 254 (366)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TS------CCSE-EEETTCHHHHHHTTT--CEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hc------CCce-EEeccCHHHHHHhhC--CCCE
Confidence 368999996 999999999999999999999987665443221 11 1221 235566666666554 6999
Q ss_pred EEEcccc
Q 040584 82 VIHFAGL 88 (347)
Q Consensus 82 vih~a~~ 88 (347)
||+++|.
T Consensus 255 vid~~g~ 261 (366)
T 1yqd_A 255 IIDTVSA 261 (366)
T ss_dssp EEECCSS
T ss_pred EEECCCc
Confidence 9999974
No 441
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.85 E-value=0.0012 Score=59.93 Aligned_cols=75 Identities=17% Similarity=0.070 Sum_probs=53.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++|+|+|+ |.+|+.+++.|...|++|++++|++.+.+... +.. +..+. .+..+..++.+++. ++|+
T Consensus 168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~----~~~---g~~~~---~~~~~~~~l~~~l~--~aDv 234 (377)
T 2vhw_A 168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLD----AEF---CGRIH---TRYSSAYELEGAVK--RADL 234 (377)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HHT---TTSSE---EEECCHHHHHHHHH--HCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH----Hhc---CCeeE---eccCCHHHHHHHHc--CCCE
Confidence 478999997 99999999999999999999998765443222 211 11211 22345667777777 5899
Q ss_pred EEEccccc
Q 040584 82 VIHFAGLK 89 (347)
Q Consensus 82 vih~a~~~ 89 (347)
||.+++..
T Consensus 235 Vi~~~~~p 242 (377)
T 2vhw_A 235 VIGAVLVP 242 (377)
T ss_dssp EEECCCCT
T ss_pred EEECCCcC
Confidence 99998753
No 442
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.84 E-value=0.0054 Score=55.19 Aligned_cols=78 Identities=22% Similarity=0.278 Sum_probs=51.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCe-EEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH----cc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYK-TVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF----AG 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~ 76 (347)
+.+|||+|+ |.+|...++.+...|.+ |+++++++.+.+.. .++ . ..+..+..|-.+.+++.+.+ ..
T Consensus 180 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~l-~---~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 180 GDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA----KEI-C---PEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH----HHH-C---TTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHh-c---hhcccccccccchHHHHHHHHHHhCC
Confidence 368999998 99999999999999997 88888765554332 222 1 12333334434444444333 23
Q ss_pred CCCcEEEEcccc
Q 040584 77 TKFDAVIHFAGL 88 (347)
Q Consensus 77 ~~~d~vih~a~~ 88 (347)
.++|+||.++|.
T Consensus 251 ~g~Dvvid~~g~ 262 (363)
T 3m6i_A 251 IEPAVALECTGV 262 (363)
T ss_dssp CCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 379999999873
No 443
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.84 E-value=0.00068 Score=56.60 Aligned_cols=41 Identities=15% Similarity=0.172 Sum_probs=35.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEE-EeCCCchhHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVV-VDNLDNASEIAV 43 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~-~~r~~~~~~~~~ 43 (347)
||+|.|+| +|.+|..+++.|.+.|++|++ .+|++.+.+...
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~ 64 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVT 64 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHH
Confidence 57999999 999999999999999999998 788776655443
No 444
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.83 E-value=0.00049 Score=59.48 Aligned_cols=74 Identities=16% Similarity=0.304 Sum_probs=49.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++++|+|+ |.+|+.++..|++.|++|++..|+.++.+...+.+... . .+.. .|+ +++. + .++|+
T Consensus 119 ~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~----~-~~~~--~~~---~~~~---~-~~~Di 183 (272)
T 1p77_A 119 NQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY----G-NIQA--VSM---DSIP---L-QTYDL 183 (272)
T ss_dssp TCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG----S-CEEE--EEG---GGCC---C-SCCSE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc----C-CeEE--eeH---HHhc---c-CCCCE
Confidence 478999997 78999999999999999999999876655554443221 1 2222 222 1111 1 15899
Q ss_pred EEEcccccc
Q 040584 82 VIHFAGLKA 90 (347)
Q Consensus 82 vih~a~~~~ 90 (347)
||++++...
T Consensus 184 vIn~t~~~~ 192 (272)
T 1p77_A 184 VINATSAGL 192 (272)
T ss_dssp EEECCCC--
T ss_pred EEECCCCCC
Confidence 999998643
No 445
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.82 E-value=0.0022 Score=59.41 Aligned_cols=37 Identities=24% Similarity=0.359 Sum_probs=32.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASE 40 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 40 (347)
|+|.|+| +|.+|..++..|++.|++|++++|++.+.+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~ 37 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKID 37 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 5899999 899999999999999999999998765544
No 446
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.81 E-value=0.0032 Score=57.00 Aligned_cols=75 Identities=21% Similarity=0.296 Sum_probs=48.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+.+|+|+||+|.+|..+++.+...|.+|+++.+ +.+.+ .+.++ +... ..|..+.+..+++.+..++|+
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~----~~~~l------Ga~~-v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE----LVRKL------GADD-VIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH----HHHHT------TCSE-EEETTSSCHHHHHHTSCCBSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH----HHHHc------CCCE-EEECCchHHHHHHhhcCCCCE
Confidence 368999999999999999999999999988874 33322 22222 1111 124333332233333236999
Q ss_pred EEEcccc
Q 040584 82 VIHFAGL 88 (347)
Q Consensus 82 vih~a~~ 88 (347)
||+++|.
T Consensus 252 vid~~g~ 258 (375)
T 2vn8_A 252 ILDNVGG 258 (375)
T ss_dssp EEESSCT
T ss_pred EEECCCC
Confidence 9999874
No 447
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.79 E-value=0.0024 Score=57.64 Aligned_cols=71 Identities=21% Similarity=0.329 Sum_probs=49.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCC---chhHHHHHHHHHhhccCCCCeEEEecCCCC--HHHHHHHHcc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLD---NASEIAVAKVKELAGYQGNNMTFHKLDLRD--KAALEVVFAG 76 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~ 76 (347)
+++|+|+|| |.+|..+++.+...|++|+++++++ .+.+ .+.++ +...+ | .+ .+.+.+ ..
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~~~~------ga~~v--~-~~~~~~~~~~-~~- 244 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT----VIEET------KTNYY--N-SSNGYDKLKD-SV- 244 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH----HHHHH------TCEEE--E-CTTCSHHHHH-HH-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH----HHHHh------CCcee--c-hHHHHHHHHH-hC-
Confidence 478999999 9999999999999999999999876 4432 22222 23333 4 33 223333 22
Q ss_pred CCCcEEEEcccc
Q 040584 77 TKFDAVIHFAGL 88 (347)
Q Consensus 77 ~~~d~vih~a~~ 88 (347)
.++|+||+++|.
T Consensus 245 ~~~d~vid~~g~ 256 (366)
T 2cdc_A 245 GKFDVIIDATGA 256 (366)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 269999999974
No 448
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.74 E-value=0.009 Score=53.52 Aligned_cols=105 Identities=15% Similarity=0.179 Sum_probs=67.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCC-------------------chhHHHHHHHHHhhccCCCCeEEEe
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLD-------------------NASEIAVAKVKELAGYQGNNMTFHK 61 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (347)
..+|+|.| .|.+|+.+++.|+..|. +++++++.. .+.+...+.+..+.+ .-+++.+.
T Consensus 118 ~~~VlvvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--~v~v~~~~ 194 (353)
T 3h5n_A 118 NAKVVILG-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS--EISVSEIA 194 (353)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT--TSEEEEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC--CCeEEEee
Confidence 36899999 58899999999999996 667776542 233444555555432 23455666
Q ss_pred cCCCCHHHHHHHHccCCCcEEEEccccccCCccccCcchhhhhhhh-HHHHHHHHHHHcCCCeEEEeccc
Q 040584 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLT-GTITLLEVMAAHGCKNLVFSSSA 130 (347)
Q Consensus 62 ~Dl~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~-~~~~l~~~~~~~~~~~iv~~SS~ 130 (347)
.++.+...+.. ++ ++|+||.+.. |.. .-..+-++|.+.++ .+|+.+..
T Consensus 195 ~~i~~~~~~~~-~~--~~DlVvd~~D-----------------n~~~~r~~ln~~c~~~~~-p~i~~~~~ 243 (353)
T 3h5n_A 195 LNINDYTDLHK-VP--EADIWVVSAD-----------------HPFNLINWVNKYCVRANQ-PYINAGYV 243 (353)
T ss_dssp CCCCSGGGGGG-SC--CCSEEEECCC-----------------CSTTHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred cccCchhhhhH-hc--cCCEEEEecC-----------------ChHHHHHHHHHHHHHhCC-CEEEEEEe
Confidence 77766554555 65 6899999852 111 12245567888876 57766543
No 449
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.71 E-value=0.002 Score=57.17 Aligned_cols=74 Identities=20% Similarity=0.203 Sum_probs=47.5
Q ss_pred eEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHH-HHHHHHccCCCcEE
Q 040584 4 NILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKA-ALEVVFAGTKFDAV 82 (347)
Q Consensus 4 ~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~d~v 82 (347)
+|+|+||+|.+|..+++.+...|++|+++.+++.+.+.. .++ +...+ .|..+.+ ...+.+...++|+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~----~~l------Ga~~~-i~~~~~~~~~~~~~~~~~~d~v 220 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVL------GAKEV-LAREDVMAERIRPLDKQRWAAA 220 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHT------TCSEE-EECC---------CCSCCEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHc------CCcEE-EecCCcHHHHHHHhcCCcccEE
Confidence 799999999999999999999999999999886655433 222 11111 2333321 11112222269999
Q ss_pred EEcccc
Q 040584 83 IHFAGL 88 (347)
Q Consensus 83 ih~a~~ 88 (347)
|+++|.
T Consensus 221 id~~g~ 226 (328)
T 1xa0_A 221 VDPVGG 226 (328)
T ss_dssp EECSTT
T ss_pred EECCcH
Confidence 999873
No 450
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.71 E-value=0.02 Score=50.58 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=63.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCC-------------------chhHHHHHHHHHhhccCCCCeEE--
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLD-------------------NASEIAVAKVKELAGYQGNNMTF-- 59 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~-- 59 (347)
..+|+|.| .|.+|+++++.|+..|. +++++++.. .+.+...+.+..+. +.+.+
T Consensus 34 ~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in----P~v~v~~ 108 (340)
T 3rui_A 34 NTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF----PLMDATG 108 (340)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC----TTCEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC----CCCEEEE
Confidence 36899999 78899999999999996 556665532 33444455555552 34444
Q ss_pred EecCCC--------------CHHHHHHHHccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEE
Q 040584 60 HKLDLR--------------DKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLV 125 (347)
Q Consensus 60 ~~~Dl~--------------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv 125 (347)
+..++. +.+.+.++++ ++|+||.+..- ...-..+-++|.+.+. .+|
T Consensus 109 ~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~--~~DlVvd~tDn-----------------~~tR~lin~~c~~~~~-plI 168 (340)
T 3rui_A 109 VKLSIPMIGHKLVNEEAQHKDFDRLRALIK--EHDIIFLLVDS-----------------RESRWLPSLLSNIENK-TVI 168 (340)
T ss_dssp ECCCCCCTTSCCSCHHHHHHHHHHHHHHHH--HCSEEEECCSS-----------------TGGGHHHHHHHHHTTC-EEE
T ss_pred EeccccccCcccchhhhhcCCHHHHHhhhc--cCCEEEecCCC-----------------HHHHHHHHHHHHHcCC-cEE
Confidence 433331 2345667777 58999999631 1111245567777765 565
Q ss_pred Ee
Q 040584 126 FS 127 (347)
Q Consensus 126 ~~ 127 (347)
..
T Consensus 169 ~a 170 (340)
T 3rui_A 169 NA 170 (340)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 451
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=96.69 E-value=0.001 Score=63.13 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=45.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHH-HHccCCCcE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEV-VFAGTKFDA 81 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~~~d~ 81 (347)
++++|||| |.+|++++..|++.|++|+++.|+..+.+...+.+ +..+ +. +.| +.+ ... .+|+
T Consensus 365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-------~~~~--~~--~~d---l~~~~~~--~~Di 427 (523)
T 2o7s_A 365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-------GGKA--LS--LTD---LDNYHPE--DGMV 427 (523)
T ss_dssp -CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-------TC-C--EE--TTT---TTTC--C--CSEE
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCce--ee--HHH---hhhcccc--CceE
Confidence 57999998 79999999999999999999998765554433322 1111 11 112 111 111 4899
Q ss_pred EEEccccc
Q 040584 82 VIHFAGLK 89 (347)
Q Consensus 82 vih~a~~~ 89 (347)
|||++|..
T Consensus 428 lVN~agvg 435 (523)
T 2o7s_A 428 LANTTSMG 435 (523)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99999864
No 452
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.69 E-value=0.0046 Score=47.39 Aligned_cols=85 Identities=14% Similarity=0.241 Sum_probs=55.1
Q ss_pred ceEEEEcCC---CcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 3 KNILVIGGV---GYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGat---G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
++|.|.|+| |.+|..+++.|++.||+|+.++++.... .+... ..++.++.+ .+
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i---------------~G~~~-------~~s~~el~~--~v 70 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---------------EGLKC-------YRSVRELPK--DV 70 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---------------TTEEC-------BSSGGGSCT--TC
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE---------------CCeee-------cCCHHHhCC--CC
Confidence 689999997 8999999999999999988876543211 02221 122223333 58
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
|+++-+... .....+++.|.+.+++.++..++
T Consensus 71 Dlvii~vp~------------------~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 71 DVIVFVVPP------------------KVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp CEEEECSCH------------------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred CEEEEEeCH------------------HHHHHHHHHHHHcCCCEEEEcCc
Confidence 999888632 11334566676778877665553
No 453
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.69 E-value=0.0089 Score=53.37 Aligned_cols=109 Identities=17% Similarity=0.282 Sum_probs=69.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCC-------------------CchhHHHHHHHHHhhccCCCCeEEEe
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNL-------------------DNASEIAVAKVKELAGYQGNNMTFHK 61 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (347)
..+|+|.| .|.+|+.+++.|...|. .+++++.. ..+.+...+.+.++.+ .-.+..+.
T Consensus 36 ~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp--~v~v~~~~ 112 (346)
T 1y8q_A 36 ASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNP--MVDVKVDT 112 (346)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCT--TSEEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCC--CeEEEEEe
Confidence 36899999 68899999999999997 66676421 1234444555555422 22344555
Q ss_pred cCCCCHHHHHHHHccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccCC
Q 040584 62 LDLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYGW 135 (347)
Q Consensus 62 ~Dl~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg~ 135 (347)
.++.+ ....++. ++|+||.+.. |...-..+-++|++.++ .+|..++.+.+|.
T Consensus 113 ~~~~~--~~~~~~~--~~dvVv~~~d-----------------~~~~r~~ln~~~~~~~i-p~i~~~~~G~~G~ 164 (346)
T 1y8q_A 113 EDIEK--KPESFFT--QFDAVCLTCC-----------------SRDVIVKVDQICHKNSI-KFFTGDVFGYHGY 164 (346)
T ss_dssp SCGGG--CCHHHHT--TCSEEEEESC-----------------CHHHHHHHHHHHHHTTC-EEEEEEEEBTEEE
T ss_pred cccCc--chHHHhc--CCCEEEEcCC-----------------CHHHHHHHHHHHHHcCC-CEEEEeecccEEE
Confidence 55433 2345666 5899998742 23333456778888775 7888877776653
No 454
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.68 E-value=0.0055 Score=55.21 Aligned_cols=74 Identities=20% Similarity=0.208 Sum_probs=47.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHh-CCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC--HHHHHHHHccCCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLL-GGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD--KAALEVVFAGTKF 79 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (347)
.+|+|+||+|.+|...++.+.. .|.+|+++++++.+.+. +.++ +...+ .|..+ .+.+.++ ...++
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~----~~~l------Gad~v-i~~~~~~~~~v~~~-~~~g~ 240 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW----VKSL------GAHHV-IDHSKPLAAEVAAL-GLGAP 240 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH----HHHT------TCSEE-ECTTSCHHHHHHTT-CSCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH----HHHc------CCCEE-EeCCCCHHHHHHHh-cCCCc
Confidence 5799999999999999988876 68999999876554432 2232 12222 23322 1122222 22369
Q ss_pred cEEEEcccc
Q 040584 80 DAVIHFAGL 88 (347)
Q Consensus 80 d~vih~a~~ 88 (347)
|+||.++|.
T Consensus 241 Dvvid~~g~ 249 (363)
T 4dvj_A 241 AFVFSTTHT 249 (363)
T ss_dssp EEEEECSCH
T ss_pred eEEEECCCc
Confidence 999999874
No 455
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.68 E-value=0.0019 Score=56.67 Aligned_cols=65 Identities=28% Similarity=0.320 Sum_probs=47.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+|.|+| .|.+|..+++.|++.||+|++.+|++.+.+...+ . ++.. ..+..++++ .+|+
T Consensus 3 m~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~------g~~~-------~~~~~~~~~--~aDv 62 (302)
T 2h78_A 3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----A------GASA-------ARSARDAVQ--GADV 62 (302)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH----T------TCEE-------CSSHHHHHT--TCSE
T ss_pred CCEEEEEe-ecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----C------CCeE-------cCCHHHHHh--CCCe
Confidence 57899998 7999999999999999999999887655433221 1 2221 123455666 5899
Q ss_pred EEEcc
Q 040584 82 VIHFA 86 (347)
Q Consensus 82 vih~a 86 (347)
||-+.
T Consensus 63 vi~~v 67 (302)
T 2h78_A 63 VISML 67 (302)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 99886
No 456
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.65 E-value=0.003 Score=55.21 Aligned_cols=39 Identities=31% Similarity=0.527 Sum_probs=30.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhH
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASE 40 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 40 (347)
|.+||.++| .|..|..+++.|++.||+|++.+|++.+.+
T Consensus 4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~ 42 (297)
T 4gbj_A 4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAE 42 (297)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------C
T ss_pred CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 778999999 899999999999999999999998876654
No 457
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.63 E-value=0.0051 Score=57.24 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=32.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchh
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNAS 39 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 39 (347)
+.+|+|+||+|.+|...++.+...|.+|+++.+++.+.
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~ 266 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 36899999999999999999999999999988755443
No 458
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.63 E-value=0.027 Score=52.40 Aligned_cols=121 Identities=17% Similarity=0.122 Sum_probs=71.2
Q ss_pred CceEEEEcCCC-cccHHHHHHHHhC----CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHcc
Q 040584 2 AKNILVIGGVG-YIGSHTVLQLLLG----GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAG 76 (347)
Q Consensus 2 ~~~vlItGatG-~iG~~l~~~L~~~----g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (347)
+|||.|+||.+ ..|.+++..|++. |++|.+.++.....+..................+... .++.++++
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~t-----tD~~eal~- 76 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVII- 76 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHHT-
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEE-----CCHHHHhC-
Confidence 47999999765 4688889999864 8999999998766554433333322111112222221 23456677
Q ss_pred CCCcEEEEccccccC-------------Cccc--cC---------cchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 77 TKFDAVIHFAGLKAV-------------GESV--QK---------PLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 77 ~~~d~vih~a~~~~~-------------~~~~--~~---------~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
++|+||..++.... +... ++ -.....-|+.....+++.+++....-++...|
T Consensus 77 -dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~T 152 (480)
T 1obb_A 77 -DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA 152 (480)
T ss_dssp -TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred -CCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 69999999974211 1100 00 01123347778888888888876443443333
No 459
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=96.61 E-value=0.0047 Score=55.37 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC-CeEEEEe
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG-YKTVVVD 33 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~ 33 (347)
++|.|.||||++|..|++.|.+.. .++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~ 39 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEE
Confidence 589999999999999999887754 4666554
No 460
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=96.61 E-value=0.0047 Score=55.37 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCC-CeEEEEe
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGG-YKTVVVD 33 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~ 33 (347)
++|.|.||||++|..|++.|.+.. .++..+.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~ 39 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLA 39 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEE
Confidence 589999999999999999887754 4666554
No 461
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.61 E-value=0.0015 Score=58.58 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=27.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCC-CeEEEEe
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGG-YKTVVVD 33 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g-~~v~~~~ 33 (347)
+++|.|.||+|++|+.+++.|++.. .++.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 4689999999999999999998764 5777775
No 462
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.60 E-value=0.0018 Score=56.29 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=48.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+|.|+| .|.+|+.+++.|++.||+|++.+|++.+.+...+. ++.. ..++.++++ ++|+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----------g~~~-------~~~~~~~~~--~adv 60 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL----------GARQ-------ASSPAEVCA--ACDI 60 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH----------TCEE-------CSCHHHHHH--HCSE
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----------CCee-------cCCHHHHHH--cCCE
Confidence 36899998 89999999999999999999999987766543322 2221 123445555 4799
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
||-+..
T Consensus 61 vi~~v~ 66 (287)
T 3pdu_A 61 TIAMLA 66 (287)
T ss_dssp EEECCS
T ss_pred EEEEcC
Confidence 988863
No 463
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.58 E-value=0.0051 Score=57.19 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=70.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhC-----CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLG-----GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~-----g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
+||.|+||.+..|..++..|+++ +.+|.+.++...+.+........+.........+... .++.++++
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t-----~D~~eal~-- 101 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT-- 101 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS--
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE-----CCHHHHHc--
Confidence 48999998776688899889888 6789999998766544332222221111122233221 23556777
Q ss_pred CCcEEEEccccccCCccccCc------------------chhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 78 KFDAVIHFAGLKAVGESVQKP------------------LPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~~~~~------------------~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
++|+||..++.........+. .....-|+.....+++.+++.... .+|.+|.
T Consensus 102 ~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TN 172 (472)
T 1u8x_X 102 DVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN 172 (472)
T ss_dssp SCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 699999999864321100000 111333667777888888887544 4554443
No 464
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.57 E-value=0.0095 Score=54.67 Aligned_cols=38 Identities=18% Similarity=0.350 Sum_probs=32.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEI 41 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 41 (347)
+|+|.|+| +|++|..++..|++ |++|+++++++.+.+.
T Consensus 36 ~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~ 73 (432)
T 3pid_A 36 FMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDM 73 (432)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhH
Confidence 36999999 79999999999988 9999999988665544
No 465
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.56 E-value=0.0064 Score=56.26 Aligned_cols=121 Identities=17% Similarity=0.069 Sum_probs=72.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-----CCeEEEEeCCC--chhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-----GYKTVVVDNLD--NASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVF 74 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-----g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (347)
++||.|+||.+..|..|+..|+++ +.+|.+.++.. .+.+........+.........+... .++.+++
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t-----~D~~eal 81 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLT-----LDRRRAL 81 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEe-----CCHHHHh
Confidence 368999998777799999999984 67899999877 55444322222221111223333321 2355677
Q ss_pred ccCCCcEEEEccccccCCccccC---cc---------------hhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 75 AGTKFDAVIHFAGLKAVGESVQK---PL---------------PYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 75 ~~~~~d~vih~a~~~~~~~~~~~---~~---------------~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
+ ++|+||..++.........+ +. ....-|+.....+++.+++.... .+|.+|.
T Consensus 82 ~--gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tN 153 (450)
T 1s6y_A 82 D--GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTN 153 (450)
T ss_dssp T--TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred C--CCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7 69999999986432110000 00 11334667777888888887544 4555544
No 466
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.56 E-value=0.0018 Score=56.93 Aligned_cols=66 Identities=18% Similarity=0.228 Sum_probs=47.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|.|+| .|.+|..+++.|++.|++|++.+|++.+.+...+. ++.. ..++.++++ .+|+
T Consensus 9 ~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~----------g~~~-------~~~~~e~~~--~aDv 68 (306)
T 3l6d_A 9 EFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA----------GAHL-------CESVKAALS--ASPA 68 (306)
T ss_dssp SCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH----------TCEE-------CSSHHHHHH--HSSE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC----------CCee-------cCCHHHHHh--cCCE
Confidence 46899998 89999999999999999999998876654433221 2211 123455666 4899
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
||-+..
T Consensus 69 Vi~~vp 74 (306)
T 3l6d_A 69 TIFVLL 74 (306)
T ss_dssp EEECCS
T ss_pred EEEEeC
Confidence 998864
No 467
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=96.54 E-value=0.0079 Score=55.51 Aligned_cols=73 Identities=27% Similarity=0.301 Sum_probs=55.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|+|+|+ |.+|..+++.+.+.|++|++++..+..... . . --..+..|..|.+.+.++++..++|.
T Consensus 19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~--~----~------ad~~~~~~~~d~~~l~~~~~~~~~d~ 85 (433)
T 2dwc_A 19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAM--Q----V------AHRSYVGNMMDKDFLWSVVEREKPDA 85 (433)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHH--H----H------SSEEEESCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh--h----h------cceEEECCCCCHHHHHHHHHHcCCCE
Confidence 579999996 789999999999999999998866543211 1 1 11356678889988888886557999
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
|+....
T Consensus 86 V~~~~e 91 (433)
T 2dwc_A 86 IIPEIE 91 (433)
T ss_dssp EEECSS
T ss_pred EEECcc
Confidence 987643
No 468
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.53 E-value=0.0013 Score=57.79 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=34.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEI 41 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 41 (347)
+|+|.|+| .|.+|+.+++.|++.||+|++.+|++.+.+.
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~ 45 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACAN 45 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHH
Confidence 47899998 8999999999999999999999987655443
No 469
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.53 E-value=0.0023 Score=55.99 Aligned_cols=40 Identities=18% Similarity=0.056 Sum_probs=35.5
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIA 42 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 42 (347)
+|+|.|+| .|.+|..+++.|++.||+|++.+|++.+.+..
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~ 54 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPL 54 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHH
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 46899999 89999999999999999999999988776543
No 470
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.52 E-value=0.0077 Score=55.39 Aligned_cols=68 Identities=22% Similarity=0.211 Sum_probs=52.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++|+|+| .|.+|+.+++.+.+.|++|++++..+...... + .-..+..|..|.+.+.++++ ++|+
T Consensus 35 ~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~---------ad~~~~~~~~d~~~l~~~a~--~~D~ 99 (419)
T 4e4t_A 35 GAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPASPAGA---V---------ADRHLRAAYDDEAALAELAG--LCEA 99 (419)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTCHHHH---H---------SSEEECCCTTCHHHHHHHHH--HCSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcCchhh---h---------CCEEEECCcCCHHHHHHHHh--cCCE
Confidence 36899999 68999999999999999999997654432211 1 11356688999999999997 6999
Q ss_pred EEE
Q 040584 82 VIH 84 (347)
Q Consensus 82 vih 84 (347)
|+.
T Consensus 100 V~~ 102 (419)
T 4e4t_A 100 VST 102 (419)
T ss_dssp EEE
T ss_pred EEE
Confidence 983
No 471
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.52 E-value=0.0035 Score=55.49 Aligned_cols=66 Identities=20% Similarity=0.229 Sum_probs=47.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|.|+| .|.+|..+++.|++.|++|++.+|++.+.+...+ .++.. ..++.++++ .+|+
T Consensus 31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~----------~g~~~-------~~~~~e~~~--~aDv 90 (320)
T 4dll_A 31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA----------LGATI-------HEQARAAAR--DADI 90 (320)
T ss_dssp CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----------TTCEE-------ESSHHHHHT--TCSE
T ss_pred CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----------CCCEe-------eCCHHHHHh--cCCE
Confidence 46999998 7999999999999999999999987655433221 12222 123556666 5899
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
||-+..
T Consensus 91 Vi~~vp 96 (320)
T 4dll_A 91 VVSMLE 96 (320)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 998863
No 472
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.51 E-value=0.0038 Score=54.92 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=47.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
||+|.|+| .|.+|..+++.|++.||+|++.+|++.+.+...+. ++.. ..++.++++ .+|+
T Consensus 21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~----------g~~~-------~~~~~~~~~--~aDv 80 (310)
T 3doj_A 21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH----------GASV-------CESPAEVIK--KCKY 80 (310)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----------TCEE-------CSSHHHHHH--HCSE
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC----------CCeE-------cCCHHHHHH--hCCE
Confidence 47899998 89999999999999999999999987765543321 2221 123445555 4798
Q ss_pred EEEcc
Q 040584 82 VIHFA 86 (347)
Q Consensus 82 vih~a 86 (347)
||-+.
T Consensus 81 vi~~v 85 (310)
T 3doj_A 81 TIAML 85 (310)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 88876
No 473
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.51 E-value=0.0039 Score=57.03 Aligned_cols=70 Identities=19% Similarity=0.215 Sum_probs=49.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+++|+|+|+ |.+|+.+++.|...|. +|++++|+..+.....+.+ +... .+ .+++.+++. ++|
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---------g~~~--~~---~~~l~~~l~--~aD 229 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---------GGEA--VR---FDELVDHLA--RSD 229 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---------TCEE--CC---GGGHHHHHH--TCS
T ss_pred CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---------CCce--ec---HHhHHHHhc--CCC
Confidence 478999996 9999999999999998 8999988765543322222 1222 12 234666666 589
Q ss_pred EEEEcccc
Q 040584 81 AVIHFAGL 88 (347)
Q Consensus 81 ~vih~a~~ 88 (347)
+||.+.+.
T Consensus 230 vVi~at~~ 237 (404)
T 1gpj_A 230 VVVSATAA 237 (404)
T ss_dssp EEEECCSS
T ss_pred EEEEccCC
Confidence 99999764
No 474
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.48 E-value=0.013 Score=52.72 Aligned_cols=95 Identities=17% Similarity=0.215 Sum_probs=53.3
Q ss_pred CceEEEEcCCCcccHHHHHH-HHhCCC---eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQ-LLLGGY---KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~-L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (347)
|++|.|.||+|++|+.|++. |.++++ +++.+...+ .... +..+. +..+ ...|..+.+. +.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~----v~~~~---g~~i--~~~~~~~~~~----~~-- 64 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQA----APSFG---GTTG--TLQDAFDLEA----LK-- 64 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSB----CCGGG---TCCC--BCEETTCHHH----HH--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCC----ccccC---CCce--EEEecCChHH----hc--
Confidence 37899999999999999994 554554 445554322 1110 00000 1112 2223334443 34
Q ss_pred CCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEeccc
Q 040584 78 KFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSSA 130 (347)
Q Consensus 78 ~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~ 130 (347)
++|+||.+.+.. .+..++..+.+.|++ .+|=.||.
T Consensus 65 ~~DvVf~a~g~~------------------~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 65 ALDIIVTCQGGD------------------YTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp TCSEEEECSCHH------------------HHHHHHHHHHHTTCCCEEEECSST
T ss_pred CCCEEEECCCch------------------hHHHHHHHHHHCCCCEEEEcCChh
Confidence 599999998632 233566777777874 44444443
No 475
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.48 E-value=0.0078 Score=52.04 Aligned_cols=72 Identities=18% Similarity=0.200 Sum_probs=50.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+++++|+|+ |.+|+.++..|.+.|+ +|+++.|+..+.+.+.+.+... ..+..... .+ + .. ++|
T Consensus 126 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~-----~~~~~~~~--~~---l---~~--~aD 189 (281)
T 3o8q_A 126 GATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY-----GEVKAQAF--EQ---L---KQ--SYD 189 (281)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG-----SCEEEEEG--GG---C---CS--CEE
T ss_pred CCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc-----CCeeEeeH--HH---h---cC--CCC
Confidence 478999996 7899999999999996 9999999877666555554322 12333322 11 1 12 589
Q ss_pred EEEEccccc
Q 040584 81 AVIHFAGLK 89 (347)
Q Consensus 81 ~vih~a~~~ 89 (347)
+||++....
T Consensus 190 iIInaTp~g 198 (281)
T 3o8q_A 190 VIINSTSAS 198 (281)
T ss_dssp EEEECSCCC
T ss_pred EEEEcCcCC
Confidence 999997654
No 476
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.47 E-value=0.011 Score=50.54 Aligned_cols=67 Identities=16% Similarity=0.222 Sum_probs=49.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++++|+|+ |..|+.++..|.+.|.+|+++.|+.++.+.+. .+ ++... ++.+. . .+|+
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~---------~~~~~--~~~~l-------~--~~Di 175 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL---------GCDCF--MEPPK-------S--AFDL 175 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH---------TCEEE--SSCCS-------S--CCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC---------CCeEe--cHHHh-------c--cCCE
Confidence 478999995 99999999999999999999999988776544 32 12332 22221 1 4899
Q ss_pred EEEcccccc
Q 040584 82 VIHFAGLKA 90 (347)
Q Consensus 82 vih~a~~~~ 90 (347)
||++.....
T Consensus 176 VInaTp~Gm 184 (269)
T 3phh_A 176 IINATSASL 184 (269)
T ss_dssp EEECCTTCC
T ss_pred EEEcccCCC
Confidence 999976543
No 477
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.47 E-value=0.0061 Score=55.22 Aligned_cols=68 Identities=25% Similarity=0.294 Sum_probs=52.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+++|+|+| .|.+|+.+++.+.+.|++|++++..+..... .. --..+..|..|.+.+.++++ .+|+
T Consensus 12 ~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~------~~------ad~~~~~~~~d~~~l~~~~~--~~dv 76 (377)
T 3orq_A 12 GATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCR------YV------AHEFIQAKYDDEKALNQLGQ--KCDV 76 (377)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTG------GG------SSEEEECCTTCHHHHHHHHH--HCSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhh------hh------CCEEEECCCCCHHHHHHHHH--hCCc
Confidence 46899999 7889999999999999999999875543210 00 12456789999999999988 4888
Q ss_pred EEE
Q 040584 82 VIH 84 (347)
Q Consensus 82 vih 84 (347)
|..
T Consensus 77 i~~ 79 (377)
T 3orq_A 77 ITY 79 (377)
T ss_dssp EEE
T ss_pred cee
Confidence 744
No 478
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.47 E-value=0.015 Score=51.51 Aligned_cols=33 Identities=27% Similarity=0.267 Sum_probs=27.3
Q ss_pred CC-ceEEEEcCCCcccHHHHHHHHhC-CCeEEEEeC
Q 040584 1 MA-KNILVIGGVGYIGSHTVLQLLLG-GYKTVVVDN 34 (347)
Q Consensus 1 m~-~~vlItGatG~iG~~l~~~L~~~-g~~v~~~~r 34 (347)
|| ++|.|.|+ |.||+.+++.|.++ +.+|.++..
T Consensus 1 mm~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d 35 (337)
T 3e5r_O 1 MGKIKIGINGF-GRIGRLVARVALQSEDVELVAVND 35 (337)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred CCceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEEC
Confidence 55 69999999 99999999999986 578877753
No 479
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.46 E-value=0.0084 Score=53.98 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=50.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC-HHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD-KAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d 80 (347)
+.+|+|+| +|.+|...++.+...|++|+++++++.+.+. +.++ +.. ..+.-+-.+ .+.+.++....++|
T Consensus 190 g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~~l----Ga~-~vi~~~~~~~~~~v~~~~~g~g~D 259 (363)
T 3uog_A 190 GDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR----AFAL----GAD-HGINRLEEDWVERVYALTGDRGAD 259 (363)
T ss_dssp TCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHH----TCS-EEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH----HHHc----CCC-EEEcCCcccHHHHHHHHhCCCCce
Confidence 36899999 8999999999999999999999887554433 2222 111 122211112 22344444444799
Q ss_pred EEEEccc
Q 040584 81 AVIHFAG 87 (347)
Q Consensus 81 ~vih~a~ 87 (347)
+||+++|
T Consensus 260 ~vid~~g 266 (363)
T 3uog_A 260 HILEIAG 266 (363)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 9999998
No 480
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.46 E-value=0.003 Score=54.94 Aligned_cols=66 Identities=17% Similarity=0.176 Sum_probs=48.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|.|+| .|.+|+.+++.|++.||+|++.+|++.+.+...+. ++.. ..++.++++ ++|+
T Consensus 1 s~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----------g~~~-------~~~~~~~~~--~aDv 60 (287)
T 3pef_A 1 SQKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL----------GAER-------AATPCEVVE--SCPV 60 (287)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----------TCEE-------CSSHHHHHH--HCSE
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----------CCee-------cCCHHHHHh--cCCE
Confidence 37899999 79999999999999999999999987766543321 2221 123455666 4799
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
||-+..
T Consensus 61 vi~~vp 66 (287)
T 3pef_A 61 TFAMLA 66 (287)
T ss_dssp EEECCS
T ss_pred EEEEcC
Confidence 998853
No 481
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.44 E-value=0.0086 Score=51.74 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=56.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC-CCeEEEE-eCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG-GYKTVVV-DNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
+++|.|.|++|.+|+.+++.+.+. +.++.++ +|+.+... -..+..+.+... .++.-.+++.+++. ++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~--G~d~gel~G~~~-------~gv~v~~dl~~ll~--~a 89 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFV--DKDASILIGSDF-------LGVRITDDPESAFS--NT 89 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTT--TSBGGGGTTCSC-------CSCBCBSCHHHHTT--SC
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccc--ccchHHhhccCc-------CCceeeCCHHHHhc--CC
Confidence 368999999999999999999865 7887765 55432110 000001111001 11111234566666 59
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 129 (347)
|+||.++.+ ..+...++.|.+.|+ ++| ++|
T Consensus 90 DVvIDFT~p------------------~a~~~~~~~~l~~Gv-~vV-iGT 119 (288)
T 3ijp_A 90 EGILDFSQP------------------QASVLYANYAAQKSL-IHI-IGT 119 (288)
T ss_dssp SEEEECSCH------------------HHHHHHHHHHHHHTC-EEE-ECC
T ss_pred CEEEEcCCH------------------HHHHHHHHHHHHcCC-CEE-EEC
Confidence 999998632 123356677778876 555 444
No 482
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.43 E-value=0.011 Score=53.53 Aligned_cols=74 Identities=23% Similarity=0.234 Sum_probs=49.0
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC----H-HHHHHHHc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD----K-AALEVVFA 75 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~-~~~~~~~~ 75 (347)
+.+|||+|+ |.+|...++.+...|. +|+++++++.+.+.. .++ +...+ .|..+ . +.+.++..
T Consensus 193 g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~l------Ga~~v-i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 193 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVF------GATDF-VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHT------TCCEE-ECGGGCSSCHHHHHHHHHT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHh------CCceE-EeccccchhHHHHHHHHhC
Confidence 368999995 9999999999999998 799998876655432 222 22211 23322 1 23333333
Q ss_pred cCCCcEEEEcccc
Q 040584 76 GTKFDAVIHFAGL 88 (347)
Q Consensus 76 ~~~~d~vih~a~~ 88 (347)
. ++|+||+++|.
T Consensus 261 ~-g~D~vid~~g~ 272 (374)
T 1cdo_A 261 G-GVDFSLECVGN 272 (374)
T ss_dssp S-CBSEEEECSCC
T ss_pred C-CCCEEEECCCC
Confidence 3 79999999874
No 483
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.43 E-value=0.025 Score=51.94 Aligned_cols=38 Identities=26% Similarity=0.394 Sum_probs=33.3
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhH
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASE 40 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 40 (347)
|.+|.|+| .|++|..++-.|++.||+|++++.++.+.+
T Consensus 21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~ 58 (444)
T 3vtf_A 21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVE 58 (444)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence 46899998 999999999999999999999988765543
No 484
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.43 E-value=0.0011 Score=57.37 Aligned_cols=69 Identities=16% Similarity=0.082 Sum_probs=49.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCc
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFD 80 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (347)
+++++|+|+ |..|+.++..|.+.|+ +|+++.|+.++.+.+. .++..+ ..+++.+++. ++|
T Consensus 117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la-----------~~~~~~-----~~~~~~~~~~--~aD 177 (277)
T 3don_A 117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS-----------LNINKI-----NLSHAESHLD--EFD 177 (277)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC-----------SCCEEE-----CHHHHHHTGG--GCS
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-----------Hhcccc-----cHhhHHHHhc--CCC
Confidence 368999995 8999999999999998 8999999876543211 122221 2455666666 489
Q ss_pred EEEEccccc
Q 040584 81 AVIHFAGLK 89 (347)
Q Consensus 81 ~vih~a~~~ 89 (347)
+||++....
T Consensus 178 iVInaTp~G 186 (277)
T 3don_A 178 IIINTTPAG 186 (277)
T ss_dssp EEEECCC--
T ss_pred EEEECccCC
Confidence 999997643
No 485
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.41 E-value=0.02 Score=53.23 Aligned_cols=103 Identities=18% Similarity=0.234 Sum_probs=73.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcEE
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDAV 82 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (347)
++|+|.| .|-+|.+|++.|. ++++|.++.+...+...+.+.+ ++...+.+|-+|.+-+.+.=-. .+|++
T Consensus 236 ~~v~I~G-gG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l--------~~~~Vi~GD~td~~~L~ee~i~-~~D~~ 304 (461)
T 4g65_A 236 RRIMIVG-GGNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEEL--------ENTIVFCGDAADQELLTEENID-QVDVF 304 (461)
T ss_dssp CEEEEEC-CSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHC--------TTSEEEESCTTCHHHHHHTTGG-GCSEE
T ss_pred cEEEEEc-chHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHC--------CCceEEeccccchhhHhhcCch-hhcEE
Confidence 5789998 8899999999975 5699999987766665555443 3667899999999988876322 58999
Q ss_pred EEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEecccccc
Q 040584 83 IHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAY 133 (347)
Q Consensus 83 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~y 133 (347)
|-+.+- -+.|+. ....|++.|+++.|-.-.-..|
T Consensus 305 ia~T~~-------------De~Ni~----~~llAk~~gv~kvIa~vn~~~~ 338 (461)
T 4g65_A 305 IALTNE-------------DETNIM----SAMLAKRMGAKKVMVLIQRGAY 338 (461)
T ss_dssp EECCSC-------------HHHHHH----HHHHHHHTTCSEEEEECSCHHH
T ss_pred EEcccC-------------cHHHHH----HHHHHHHcCCccccccccccch
Confidence 887431 133553 3445678899888766554444
No 486
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.40 E-value=0.0039 Score=53.22 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=47.1
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|.|+| +|.+|+.+++.|.+.|++|.+.+|++.+.+...+.+ ++.. ..+ +.++++ .+|+
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---------g~~~----~~~---~~~~~~--~~D~ 63 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL---------ALPY----AMS---HQDLID--QVDL 63 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH---------TCCB----CSS---HHHHHH--TCSE
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc---------CCEe----eCC---HHHHHh--cCCE
Confidence 57999999 899999999999999999999988755443322211 1111 122 445555 5899
Q ss_pred EEEccc
Q 040584 82 VIHFAG 87 (347)
Q Consensus 82 vih~a~ 87 (347)
||-+..
T Consensus 64 Vi~~v~ 69 (259)
T 2ahr_A 64 VILGIK 69 (259)
T ss_dssp EEECSC
T ss_pred EEEEeC
Confidence 999974
No 487
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.39 E-value=0.02 Score=50.35 Aligned_cols=38 Identities=26% Similarity=0.446 Sum_probs=33.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchh
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNAS 39 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~ 39 (347)
|.|+|.|+| .|.+|..+++.|.+.|+ +|++.+|++...
T Consensus 32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~ 71 (314)
T 3ggo_A 32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI 71 (314)
T ss_dssp SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHH
Confidence 347999999 89999999999999999 999998876544
No 488
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.39 E-value=0.0077 Score=54.37 Aligned_cols=73 Identities=18% Similarity=0.219 Sum_probs=50.9
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+.+|||+|+ |.+|...++.+...|++|+++.+++.+.+... ++ +... ..|..+.+.+.++.. ++|+
T Consensus 195 g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~----~l------Ga~~-vi~~~~~~~~~~~~~--g~Dv 260 (369)
T 1uuf_A 195 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK----AL------GADE-VVNSRNADEMAAHLK--SFDF 260 (369)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HH------TCSE-EEETTCHHHHHTTTT--CEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hc------CCcE-EeccccHHHHHHhhc--CCCE
Confidence 368999997 88999999999999999999998766654332 22 1111 134455544444333 7999
Q ss_pred EEEcccc
Q 040584 82 VIHFAGL 88 (347)
Q Consensus 82 vih~a~~ 88 (347)
||.++|.
T Consensus 261 vid~~g~ 267 (369)
T 1uuf_A 261 ILNTVAA 267 (369)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 9999874
No 489
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.38 E-value=0.0086 Score=46.20 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=27.9
Q ss_pred ceEEEEcCC---CcccHHHHHHHHhCCCeEEEEe
Q 040584 3 KNILVIGGV---GYIGSHTVLQLLLGGYKTVVVD 33 (347)
Q Consensus 3 ~~vlItGat---G~iG~~l~~~L~~~g~~v~~~~ 33 (347)
++|.|.|++ |.+|..+++.|++.||+|+.+.
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn 56 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVN 56 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC
Confidence 689999998 8999999999999999977664
No 490
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.34 E-value=0.0073 Score=54.12 Aligned_cols=37 Identities=24% Similarity=0.225 Sum_probs=32.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhH
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASE 40 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 40 (347)
|+|.|+| .|.+|+.++..|.+.|++|++++|++...+
T Consensus 5 mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~ 41 (359)
T 1bg6_A 5 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIK 41 (359)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 6899999 599999999999999999999988755443
No 491
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.33 E-value=0.0028 Score=53.74 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=32.8
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCch
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNA 38 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~ 38 (347)
+|+|.|+| .|.+|+.+++.|++.|++|++.+|++.+
T Consensus 19 ~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 19 GMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 58999998 9999999999999999999999987554
No 492
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=96.32 E-value=0.0081 Score=54.54 Aligned_cols=72 Identities=19% Similarity=0.312 Sum_probs=53.7
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCCcE
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKFDA 81 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (347)
+|+|+|+|+ |.+|..+++.+.+.|++|++++..+..... .. .-..+..|..|.+.+.++++..++|.
T Consensus 11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~------~~------~d~~~~~~~~d~~~l~~~~~~~~~d~ 77 (391)
T 1kjq_A 11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM------HV------AHRSHVINMLDGDALRRVVELEKPHY 77 (391)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG------GG------SSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh------hh------ccceEECCCCCHHHHHHHHHHcCCCE
Confidence 589999985 789999999999999999998865443210 00 11345678888888888886557999
Q ss_pred EEEcc
Q 040584 82 VIHFA 86 (347)
Q Consensus 82 vih~a 86 (347)
|+...
T Consensus 78 v~~~~ 82 (391)
T 1kjq_A 78 IVPEI 82 (391)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 98753
No 493
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=96.31 E-value=0.0048 Score=57.25 Aligned_cols=76 Identities=20% Similarity=0.074 Sum_probs=52.3
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEec-------CCCCHHHHHHH
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKL-------DLRDKAALEVV 73 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 73 (347)
||++|||+|+ |.+|..+++.+.+.|++|+++............ + .. ..+.. |..|.+.+.++
T Consensus 1 m~k~ilI~g~-g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~----~----ad--~~~~~~p~~~~~~~~d~~~l~~~ 69 (449)
T 2w70_A 1 MLDKIVIANR-GEIALRILRACKELGIKTVAVHSSADRDLKHVL----L----AD--ETVCIGPAPSVKSYLNIPAIISA 69 (449)
T ss_dssp CCSEEEECCC-HHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHH----H----SS--EEEEEECSSGGGTTTCHHHHHHH
T ss_pred CCceEEEeCC-cHHHHHHHHHHHHcCCeEEEEeccccccCchhh----h----CC--EEEEcCCCCccccccCHHHHHHH
Confidence 8899999995 799999999999999999988643222111111 1 11 12222 66788888888
Q ss_pred HccCCCcEEEEccc
Q 040584 74 FAGTKFDAVIHFAG 87 (347)
Q Consensus 74 ~~~~~~d~vih~a~ 87 (347)
+++.++|.|+-..+
T Consensus 70 ~~~~~~d~v~~~~g 83 (449)
T 2w70_A 70 AEITGAVAIHPGYG 83 (449)
T ss_dssp HHHHTCCEEECCSS
T ss_pred HHHcCCCEEEECCC
Confidence 86657999886533
No 494
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.30 E-value=0.01 Score=54.25 Aligned_cols=75 Identities=23% Similarity=0.345 Sum_probs=49.6
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCH---HHHHHHHccC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDK---AALEVVFAGT 77 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~ 77 (347)
+.+|+|+|+ |.+|...++.+...|+ +|+++++++.+.+. +.++ +...+ .|..+. +.+.++....
T Consensus 214 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----~~~l------Ga~~v-i~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 214 GDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL----AKEL------GADHV-IDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH----HHHH------TCSEE-ECTTTSCHHHHHHHHTTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHc------CCCEE-EcCCCCCHHHHHHHHhCCC
Confidence 368999998 9999999999999999 89988876554432 2222 12211 233222 2344444434
Q ss_pred CCcEEEEcccc
Q 040584 78 KFDAVIHFAGL 88 (347)
Q Consensus 78 ~~d~vih~a~~ 88 (347)
++|+||.++|.
T Consensus 282 g~D~vid~~g~ 292 (404)
T 3ip1_A 282 GAKLFLEATGV 292 (404)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 495
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.28 E-value=0.015 Score=52.64 Aligned_cols=74 Identities=24% Similarity=0.250 Sum_probs=52.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecC----------------CCC
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLD----------------LRD 66 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~d 66 (347)
.+|+|+|+ |-+|...++.|...|.+|+++++++.+.+... .+ +..++..+ +++
T Consensus 191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~----~~------G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA----SL------GAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH----HT------TCEECCCCC-----------------C
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH----Hc------CCceeecccccccccccccchhhhcch
Confidence 58999995 99999999999999999999999877654332 22 22222221 222
Q ss_pred ------HHHHHHHHccCCCcEEEEccccc
Q 040584 67 ------KAALEVVFAGTKFDAVIHFAGLK 89 (347)
Q Consensus 67 ------~~~~~~~~~~~~~d~vih~a~~~ 89 (347)
...+.++++ ++|+||.++...
T Consensus 260 ~~~~~~~~~l~e~l~--~aDVVI~tvlip 286 (405)
T 4dio_A 260 EYQVKQAALVAEHIA--KQDIVITTALIP 286 (405)
T ss_dssp HHHHHHHHHHHHHHH--TCSEEEECCCCS
T ss_pred hhhhhhHhHHHHHhc--CCCEEEECCcCC
Confidence 246777887 699999987643
No 496
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=96.27 E-value=0.023 Score=54.60 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=66.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCC-eEEEEeCCC-------------------chhHHHHHHHHHhhccCCCCeEEEec
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGY-KTVVVDNLD-------------------NASEIAVAKVKELAGYQGNNMTFHKL 62 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (347)
.+|+|.| .|.+|+.+++.|+..|. ++++++... .+.....+.+..+.+ .-.+..+..
T Consensus 18 s~VlVVG-aGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP--~v~V~a~~~ 94 (640)
T 1y8q_B 18 GRVLVVG-AGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYP--KANIVAYHD 94 (640)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCT--TCEEEEEES
T ss_pred CeEEEEC-cCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCC--CCeEEEEec
Confidence 5899999 58899999999999996 666766432 112223333333321 234555666
Q ss_pred CCCCHHHHHHHHccCCCcEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCCeEEEeccccccC
Q 040584 63 DLRDKAALEVVFAGTKFDAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCKNLVFSSSATAYG 134 (347)
Q Consensus 63 Dl~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~~yg 134 (347)
++.+......++. ++|+||.+.. |+..-..+-++|...++ .+|..++.+.+|
T Consensus 95 ~i~~~~~~~~~~~--~~DlVvda~D-----------------n~~aR~~ln~~c~~~~i-PlI~~g~~G~~G 146 (640)
T 1y8q_B 95 SIMNPDYNVEFFR--QFILVMNALD-----------------NRAARNHVNRMCLAADV-PLIESGTAGYLG 146 (640)
T ss_dssp CTTSTTSCHHHHT--TCSEEEECCS-----------------CHHHHHHHHHHHHHHTC-CEEEEEEETTEE
T ss_pred ccchhhhhHhhhc--CCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEEEecccc
Confidence 6654322235566 5899998842 33333456667777776 577776655433
No 497
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.26 E-value=0.021 Score=49.94 Aligned_cols=110 Identities=21% Similarity=0.226 Sum_probs=69.4
Q ss_pred CceEEEEcCCCcccHHHHHHHHhCCC--eEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHccCCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLGGY--KTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRDKAALEVVFAGTKF 79 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (347)
++||.|+|| |.+|..++..|+.+|+ +|.+++.... .......+.+.. .+++.. ..| + +.++ ++
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~---~~~i~~-t~d------~-~~l~--~a 78 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFN---LPNVEI-SKD------L-SASA--HS 78 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHT---CTTEEE-ESC------G-GGGT--TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhc---CCCeEE-eCC------H-HHHC--CC
Confidence 378999995 9999999999999998 9999998764 221111222221 224443 233 2 3355 69
Q ss_pred cEEEEccccccCCccccCcchhhhhhhhHHHHHHHHHHHcCCC-eEEEecc
Q 040584 80 DAVIHFAGLKAVGESVQKPLPYFDNNLTGTITLLEVMAAHGCK-NLVFSSS 129 (347)
Q Consensus 80 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS 129 (347)
|+||-.+|...+ .....+....|+...+.+++.+.+.... .++.+|.
T Consensus 79 D~Vi~aag~~~p---G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 79 KVVIFTVNSLGS---SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp SEEEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred CEEEEcCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 999999987432 2233456677888888888888876433 4555554
No 498
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.26 E-value=0.02 Score=50.77 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=27.4
Q ss_pred CCceEEEEcCCCcccHHHHHHHHhCC---CeEEEEe
Q 040584 1 MAKNILVIGGVGYIGSHTVLQLLLGG---YKTVVVD 33 (347)
Q Consensus 1 m~~~vlItGatG~iG~~l~~~L~~~g---~~v~~~~ 33 (347)
|+.+|.|.|+ |.||+.+++.|.+++ .+|.++.
T Consensus 1 M~ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 1 MTIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred CceEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 7789999999 999999999998872 6777665
No 499
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.26 E-value=0.0048 Score=55.10 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=49.2
Q ss_pred CceEEEEcCCCcccHHHHHHHHhC--CCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCCCC-HHHHHHHHccCC
Q 040584 2 AKNILVIGGVGYIGSHTVLQLLLG--GYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDLRD-KAALEVVFAGTK 78 (347)
Q Consensus 2 ~~~vlItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~ 78 (347)
+.+|+|+|+ |.+|...++.+... |++|+++++++.+.+. +.++ +...+ .|..+ .+...++-...+
T Consensus 171 g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~----~~~l------Ga~~v-i~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 171 EPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF----ALEL------GADYV-SEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH----HHHH------TCSEE-ECHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH----HHHh------CCCEE-eccccchHHHHHhhcCCC
Confidence 468999999 99999999999888 9999999876554432 2222 11111 23333 232333333336
Q ss_pred CcEEEEcccc
Q 040584 79 FDAVIHFAGL 88 (347)
Q Consensus 79 ~d~vih~a~~ 88 (347)
+|+||+++|.
T Consensus 239 ~D~vid~~g~ 248 (344)
T 2h6e_A 239 ASIAIDLVGT 248 (344)
T ss_dssp EEEEEESSCC
T ss_pred ccEEEECCCC
Confidence 9999999873
No 500
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.25 E-value=0.0076 Score=54.18 Aligned_cols=73 Identities=27% Similarity=0.299 Sum_probs=51.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHhCCCeEEEEeCCCchhHHHHHHHHHhhccCCCCeEEEecCC------------------
Q 040584 3 KNILVIGGVGYIGSHTVLQLLLGGYKTVVVDNLDNASEIAVAKVKELAGYQGNNMTFHKLDL------------------ 64 (347)
Q Consensus 3 ~~vlItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------ 64 (347)
.+|+|+|+ |-+|...++.|...|.+|++++|++.+.+...+ + +..++..|.
T Consensus 185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----l------Ga~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----V------GAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----T------TCEECCCC-------------CHHHHH
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c------CCeEEeccccccccccchhhhhHHHHh
Confidence 58999995 999999999999999999999998766543322 2 223322211
Q ss_pred CCHHHHHHHHccCCCcEEEEcccc
Q 040584 65 RDKAALEVVFAGTKFDAVIHFAGL 88 (347)
Q Consensus 65 ~d~~~~~~~~~~~~~d~vih~a~~ 88 (347)
.+.+.+.+++. ++|+||.++..
T Consensus 254 ~~~~~l~e~l~--~aDIVI~tv~i 275 (381)
T 3p2y_A 254 QQQQALEDAIT--KFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHT--TCSEEEECCCC
T ss_pred hhHHHHHHHHh--cCCEEEECCCC
Confidence 12346677777 69999998754
Done!