Query 040586
Match_columns 82
No_of_seqs 118 out of 1765
Neff 11.6
Searched_HMMs 46136
Date Fri Mar 29 09:49:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040586.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040586hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 99.9 3.2E-23 7E-28 115.8 5.1 78 1-81 173-251 (361)
2 KOG0600 Cdc2-related protein k 99.9 2.5E-22 5.5E-27 114.0 5.9 76 2-82 218-293 (560)
3 KOG0192 Tyrosine kinase specif 99.9 3.8E-22 8.2E-27 111.5 6.1 75 1-81 141-217 (362)
4 KOG0591 NIMA (never in mitosis 99.9 1.2E-22 2.7E-27 109.4 3.8 76 3-81 125-201 (375)
5 KOG0594 Protein kinase PCTAIRE 99.9 5.1E-22 1.1E-26 108.4 4.7 74 3-82 121-194 (323)
6 KOG0598 Ribosomal protein S6 k 99.9 4.7E-22 1E-26 109.2 4.5 72 4-81 127-198 (357)
7 KOG0575 Polo-like serine/threo 99.9 1E-21 2.2E-26 113.0 5.8 73 3-81 119-191 (592)
8 KOG0581 Mitogen-activated prot 99.9 4.7E-22 1E-26 109.3 4.1 73 3-82 179-251 (364)
9 KOG0595 Serine/threonine-prote 99.8 7.6E-22 1.6E-26 109.7 3.9 72 3-81 110-187 (429)
10 KOG0599 Phosphorylase kinase g 99.8 1.2E-21 2.6E-26 105.6 4.2 72 3-81 124-195 (411)
11 KOG0616 cAMP-dependent protein 99.8 2.4E-21 5.3E-26 104.7 5.3 71 3-82 145-215 (355)
12 KOG0198 MEKK and related serin 99.8 7.5E-21 1.6E-25 104.3 6.7 76 3-81 118-194 (313)
13 KOG0659 Cdk activating kinase 99.8 2.9E-21 6.2E-26 103.1 4.8 73 4-82 103-175 (318)
14 KOG0615 Serine/threonine prote 99.8 2.4E-21 5.2E-26 108.2 4.3 70 6-82 280-352 (475)
15 KOG0593 Predicted protein kina 99.8 2.2E-21 4.7E-26 105.4 3.8 73 4-82 103-175 (396)
16 KOG0661 MAPK related serine/th 99.8 3.7E-21 8E-26 108.8 4.6 72 3-81 111-182 (538)
17 KOG0583 Serine/threonine prote 99.8 7.8E-21 1.7E-25 106.6 5.6 73 3-82 121-195 (370)
18 KOG0193 Serine/threonine prote 99.8 3.4E-21 7.4E-26 111.4 3.8 76 2-81 488-563 (678)
19 KOG0592 3-phosphoinositide-dep 99.8 1.3E-20 2.9E-25 107.9 5.0 75 4-81 176-260 (604)
20 KOG0663 Protein kinase PITSLRE 99.8 1.3E-20 2.8E-25 103.4 4.6 74 3-82 178-251 (419)
21 KOG0578 p21-activated serine/t 99.8 4.3E-20 9.3E-25 105.8 6.4 73 3-81 370-442 (550)
22 KOG0986 G protein-coupled rece 99.8 4.1E-20 8.9E-25 104.6 5.8 72 3-81 288-359 (591)
23 KOG0197 Tyrosine kinases [Sign 99.8 1.6E-20 3.5E-25 106.6 4.1 75 2-81 303-377 (468)
24 KOG0582 Ste20-like serine/thre 99.8 7.8E-20 1.7E-24 103.0 5.3 73 6-81 130-203 (516)
25 KOG0694 Serine/threonine prote 99.8 9.3E-20 2E-24 106.4 5.6 72 4-81 470-541 (694)
26 KOG0666 Cyclin C-dependent kin 99.8 1E-19 2.2E-24 99.5 3.9 76 4-82 134-213 (438)
27 KOG0585 Ca2+/calmodulin-depend 99.8 2.3E-19 4.9E-24 101.9 5.2 77 2-81 210-288 (576)
28 KOG0658 Glycogen synthase kina 99.8 3.3E-19 7.1E-24 98.1 4.7 69 7-82 130-199 (364)
29 KOG3653 Transforming growth fa 99.8 5.5E-19 1.2E-23 100.1 5.2 81 1-82 306-392 (534)
30 cd07868 STKc_CDK8 Catalytic do 99.8 8E-19 1.7E-23 96.5 5.8 75 4-81 110-188 (317)
31 KOG0611 Predicted serine/threo 99.8 4.4E-19 9.5E-24 100.1 4.5 73 3-82 154-226 (668)
32 KOG0660 Mitogen-activated prot 99.8 4.2E-19 9.1E-24 97.6 4.0 73 5-81 128-200 (359)
33 KOG0589 Serine/threonine prote 99.8 2.1E-19 4.6E-24 101.5 2.5 74 3-82 107-180 (426)
34 cd05621 STKc_ROCK2 Catalytic d 99.8 1.3E-18 2.9E-23 97.7 5.3 74 3-81 143-216 (370)
35 cd07859 STKc_TDY_MAPK_plant Ca 99.8 9.6E-19 2.1E-23 96.7 4.2 77 2-81 103-179 (338)
36 KOG0588 Serine/threonine prote 99.8 1.4E-18 3E-23 101.8 5.0 73 3-82 113-185 (786)
37 cd05571 STKc_PKB Catalytic dom 99.8 1.6E-18 3.5E-23 95.7 5.1 73 3-81 96-168 (323)
38 KOG0201 Serine/threonine prote 99.8 1.3E-18 2.9E-23 97.7 4.5 69 7-81 116-184 (467)
39 cd05614 STKc_MSK2_N N-terminal 99.8 1.5E-18 3.2E-23 96.1 4.6 74 3-81 106-179 (332)
40 KOG0033 Ca2+/calmodulin-depend 99.8 2.4E-18 5.2E-23 91.8 5.1 70 5-81 113-185 (355)
41 cd05594 STKc_PKB_alpha Catalyt 99.8 3.6E-18 7.8E-23 94.4 6.0 73 3-81 96-169 (325)
42 KOG0584 Serine/threonine prote 99.8 1E-18 2.2E-23 101.3 3.9 72 3-80 144-216 (632)
43 PHA03212 serine/threonine kina 99.7 2.4E-18 5.2E-23 97.3 5.2 75 2-81 182-256 (391)
44 cd07867 STKc_CDC2L6 Catalytic 99.7 2.9E-18 6.3E-23 94.2 5.4 76 3-81 109-188 (317)
45 cd05593 STKc_PKB_gamma Catalyt 99.7 2.9E-18 6.2E-23 95.0 5.1 73 3-81 96-168 (328)
46 cd05586 STKc_Sck1_like Catalyt 99.7 3E-18 6.4E-23 94.9 5.0 73 3-81 97-169 (330)
47 cd05102 PTKc_VEGFR3 Catalytic 99.7 4.7E-18 1E-22 94.2 5.8 75 3-81 175-249 (338)
48 cd05631 STKc_GRK4 Catalytic do 99.7 4.8E-18 1E-22 92.5 5.7 72 3-81 103-174 (285)
49 cd05622 STKc_ROCK1 Catalytic d 99.7 4.6E-18 1E-22 95.6 5.8 74 3-81 143-216 (371)
50 KOG0577 Serine/threonine prote 99.7 7.7E-19 1.7E-23 102.5 2.6 66 6-81 130-195 (948)
51 cd05587 STKc_cPKC Catalytic do 99.7 3.7E-18 7.9E-23 94.3 5.1 73 3-81 102-174 (324)
52 cd05616 STKc_cPKC_beta Catalyt 99.7 3.2E-18 7E-23 94.5 4.9 73 3-81 102-174 (323)
53 cd05595 STKc_PKB_beta Catalyti 99.7 4.6E-18 9.9E-23 94.0 5.4 74 2-81 95-168 (323)
54 PHA03210 serine/threonine kina 99.7 5.7E-18 1.2E-22 98.2 5.9 74 3-81 268-341 (501)
55 cd07862 STKc_CDK6 Catalytic do 99.7 3.6E-18 7.8E-23 92.9 4.8 72 3-81 111-182 (290)
56 cd05592 STKc_nPKC_theta_delta 99.7 5.5E-18 1.2E-22 93.5 5.3 73 3-81 97-169 (316)
57 cd05596 STKc_ROCK Catalytic do 99.7 6.4E-18 1.4E-22 94.9 5.5 74 3-81 143-216 (370)
58 cd05585 STKc_YPK1_like Catalyt 99.7 5E-18 1.1E-22 93.4 5.0 73 3-81 94-166 (312)
59 cd07871 STKc_PCTAIRE3 Catalyti 99.7 4.9E-18 1.1E-22 92.5 4.6 73 3-81 104-176 (288)
60 cd05602 STKc_SGK1 Catalytic do 99.7 5.4E-18 1.2E-22 93.7 4.8 73 3-81 97-169 (325)
61 PHA03211 serine/threonine kina 99.7 6.6E-18 1.4E-22 97.2 5.2 76 2-81 260-335 (461)
62 cd05604 STKc_SGK3 Catalytic do 99.7 6.7E-18 1.5E-22 93.3 4.9 73 3-81 97-169 (325)
63 cd05591 STKc_nPKC_epsilon Cata 99.7 6.5E-18 1.4E-22 93.2 4.7 73 3-81 97-169 (321)
64 cd05603 STKc_SGK2 Catalytic do 99.7 8.1E-18 1.8E-22 92.8 5.0 73 3-81 97-169 (321)
65 PHA02882 putative serine/threo 99.7 1.2E-17 2.5E-22 91.4 5.5 76 3-81 127-206 (294)
66 cd07869 STKc_PFTAIRE1 Catalyti 99.7 1E-17 2.3E-22 91.7 5.3 73 3-81 104-176 (303)
67 cd05590 STKc_nPKC_eta Catalyti 99.7 8.8E-18 1.9E-22 92.8 5.1 73 3-81 97-169 (320)
68 cd05575 STKc_SGK Catalytic dom 99.7 9.2E-18 2E-22 92.7 5.1 73 3-81 97-169 (323)
69 KOG0597 Serine-threonine prote 99.7 5.2E-18 1.1E-22 98.5 4.2 73 3-81 101-173 (808)
70 KOG1035 eIF-2alpha kinase GCN2 99.7 9.6E-18 2.1E-22 102.9 5.5 76 3-81 698-788 (1351)
71 cd05620 STKc_nPKC_delta Cataly 99.7 7.9E-18 1.7E-22 92.8 4.8 73 3-81 97-169 (316)
72 cd05615 STKc_cPKC_alpha Cataly 99.7 6.7E-18 1.4E-22 93.4 4.5 74 2-81 101-174 (323)
73 cd05628 STKc_NDR1 Catalytic do 99.7 9.6E-18 2.1E-22 93.9 5.1 50 3-55 102-151 (363)
74 PTZ00283 serine/threonine prot 99.7 1.1E-17 2.5E-22 96.9 5.5 75 3-81 144-218 (496)
75 cd05618 STKc_aPKC_iota Catalyt 99.7 1E-17 2.2E-22 92.9 5.1 73 3-81 97-169 (329)
76 cd05617 STKc_aPKC_zeta Catalyt 99.7 8E-18 1.7E-22 93.2 4.7 73 3-81 97-169 (327)
77 cd05584 STKc_p70S6K Catalytic 99.7 1.7E-17 3.6E-22 91.8 5.9 73 3-81 101-173 (323)
78 cd05589 STKc_PKN Catalytic dom 99.7 9.6E-18 2.1E-22 92.7 4.9 74 2-81 101-174 (324)
79 cd07874 STKc_JNK3 Catalytic do 99.7 7.5E-18 1.6E-22 94.0 4.5 72 3-81 120-191 (355)
80 KOG0664 Nemo-like MAPK-related 99.7 1.3E-18 2.9E-23 94.2 1.5 71 7-82 161-231 (449)
81 PHA03209 serine/threonine kina 99.7 1.1E-17 2.5E-22 93.5 5.2 73 2-81 157-229 (357)
82 PTZ00036 glycogen synthase kin 99.7 8.4E-18 1.8E-22 96.3 4.7 72 3-81 171-243 (440)
83 KOG0669 Cyclin T-dependent kin 99.7 4.9E-18 1.1E-22 91.0 3.4 76 4-82 126-202 (376)
84 cd05624 STKc_MRCK_beta Catalyt 99.7 1.7E-17 3.8E-22 92.0 5.6 74 3-81 103-176 (331)
85 cd05619 STKc_nPKC_theta Cataly 99.7 1.3E-17 2.8E-22 92.0 5.0 74 2-81 96-169 (316)
86 PTZ00426 cAMP-dependent protei 99.7 9.3E-18 2E-22 93.5 4.5 70 3-81 132-201 (340)
87 cd05601 STKc_CRIK Catalytic do 99.7 1.7E-17 3.8E-22 91.8 5.4 74 3-81 103-176 (330)
88 cd07878 STKc_p38beta_MAPK11 Ca 99.7 2.5E-17 5.4E-22 91.5 6.0 70 3-81 119-188 (343)
89 cd07875 STKc_JNK1 Catalytic do 99.7 1.1E-17 2.3E-22 93.7 4.5 72 3-81 127-198 (364)
90 PLN00034 mitogen-activated pro 99.7 2.3E-17 5E-22 92.1 5.8 72 3-80 169-240 (353)
91 cd05597 STKc_DMPK_like Catalyt 99.7 2E-17 4.4E-22 91.7 5.5 74 3-81 103-176 (331)
92 PHA03207 serine/threonine kina 99.7 1.1E-17 2.4E-22 94.5 4.5 76 2-81 185-260 (392)
93 cd05608 STKc_GRK1 Catalytic do 99.7 1.5E-17 3.3E-22 90.3 4.8 73 3-81 98-170 (280)
94 PTZ00263 protein kinase A cata 99.7 1.4E-17 3.1E-22 92.3 4.7 70 3-81 119-188 (329)
95 KOG0614 cGMP-dependent protein 99.7 9.7E-18 2.1E-22 96.5 4.1 70 5-81 523-592 (732)
96 cd07876 STKc_JNK2 Catalytic do 99.7 2.1E-17 4.6E-22 92.4 5.3 72 3-81 124-195 (359)
97 PTZ00267 NIMA-related protein 99.7 3.6E-17 7.9E-22 94.5 6.4 75 3-81 170-244 (478)
98 cd07853 STKc_NLK Catalytic dom 99.7 2.4E-17 5.3E-22 92.5 5.4 74 3-81 104-177 (372)
99 cd05623 STKc_MRCK_alpha Cataly 99.7 2.4E-17 5.2E-22 91.4 5.3 74 3-81 103-176 (332)
100 cd05588 STKc_aPKC Catalytic do 99.7 2E-17 4.2E-22 91.7 4.9 73 3-81 97-169 (329)
101 KOG0579 Ste20-like serine/thre 99.7 1.5E-17 3.3E-22 98.1 4.3 73 3-81 131-203 (1187)
102 KOG0983 Mitogen-activated prot 99.7 4.5E-17 9.8E-22 88.1 5.6 69 7-81 196-264 (391)
103 cd05612 STKc_PRKX_like Catalyt 99.7 2.4E-17 5.1E-22 90.0 4.5 70 3-81 102-171 (291)
104 KOG4721 Serine/threonine prote 99.7 3.6E-18 7.9E-23 99.4 1.4 72 3-81 213-284 (904)
105 cd07863 STKc_CDK4 Catalytic do 99.7 3.6E-17 7.9E-22 88.8 5.2 72 3-81 109-180 (288)
106 cd05096 PTKc_DDR1 Catalytic do 99.7 2.8E-17 6.2E-22 90.0 4.8 75 3-81 139-213 (304)
107 cd05600 STKc_Sid2p_Dbf2p Catal 99.7 2.7E-17 5.8E-22 91.2 4.6 70 3-81 102-171 (333)
108 PTZ00284 protein kinase; Provi 99.7 3E-17 6.4E-22 94.5 4.9 70 3-81 232-318 (467)
109 cd07848 STKc_CDKL5 Catalytic d 99.7 4E-17 8.7E-22 88.7 5.1 74 3-81 101-174 (287)
110 PLN03225 Serine/threonine-prot 99.7 4E-17 8.7E-22 95.9 5.4 71 5-80 258-329 (566)
111 KOG0984 Mitogen-activated prot 99.7 2E-17 4.4E-22 86.4 3.5 70 6-81 152-221 (282)
112 cd05625 STKc_LATS1 Catalytic d 99.7 4.4E-17 9.5E-22 91.8 5.0 47 4-53 103-149 (382)
113 cd05599 STKc_NDR_like Catalyti 99.7 4.5E-17 9.8E-22 91.1 5.1 50 3-55 102-151 (364)
114 cd05582 STKc_RSK_N N-terminal 99.7 3E-17 6.4E-22 90.5 4.3 73 3-81 99-171 (318)
115 KOG2052 Activin A type IB rece 99.7 9.9E-17 2.2E-21 90.7 6.2 79 3-81 309-393 (513)
116 cd05573 STKc_ROCK_NDR_like Cat 99.7 4.2E-17 9E-22 90.7 4.8 76 3-81 102-203 (350)
117 cd05607 STKc_GRK7 Catalytic do 99.7 9.5E-17 2.1E-21 87.1 6.0 72 3-81 96-167 (277)
118 cd05106 PTKc_CSF-1R Catalytic 99.7 8E-17 1.7E-21 90.7 5.9 76 2-81 212-287 (374)
119 cd05627 STKc_NDR2 Catalytic do 99.7 4.9E-17 1.1E-21 91.0 5.0 50 3-55 102-151 (360)
120 KOG0662 Cyclin-dependent kinas 99.7 3E-17 6.6E-22 84.5 3.7 73 4-82 103-175 (292)
121 cd05570 STKc_PKC Catalytic dom 99.7 4.2E-17 9.2E-22 90.0 4.4 74 2-81 96-169 (318)
122 cd05629 STKc_NDR_like_fungal C 99.7 5.7E-17 1.2E-21 91.2 5.0 49 3-54 102-150 (377)
123 cd05626 STKc_LATS2 Catalytic d 99.7 6.3E-17 1.4E-21 91.2 4.9 49 3-54 102-150 (381)
124 cd05054 PTKc_VEGFR Catalytic d 99.7 9.5E-17 2.1E-21 89.3 5.6 76 2-81 173-248 (337)
125 cd05598 STKc_LATS Catalytic do 99.7 6.2E-17 1.3E-21 91.0 4.7 47 4-53 103-149 (376)
126 PLN00181 protein SPA1-RELATED; 99.7 8.6E-17 1.9E-21 97.3 5.4 77 2-81 80-188 (793)
127 cd07872 STKc_PCTAIRE2 Catalyti 99.7 8.2E-17 1.8E-21 88.4 4.8 73 3-81 105-177 (309)
128 KOG0612 Rho-associated, coiled 99.7 7.4E-17 1.6E-21 98.7 4.4 73 4-81 177-249 (1317)
129 KOG0667 Dual-specificity tyros 99.7 1.4E-16 3.1E-21 92.6 5.4 71 3-82 290-362 (586)
130 KOG0696 Serine/threonine prote 99.7 2E-16 4.2E-21 89.8 5.6 73 3-81 451-523 (683)
131 KOG4236 Serine/threonine prote 99.7 7.8E-17 1.7E-21 93.5 4.1 69 6-81 668-739 (888)
132 cd05042 PTKc_Aatyk Catalytic d 99.7 1.1E-16 2.3E-21 86.4 4.4 74 3-80 101-174 (269)
133 KOG0032 Ca2+/calmodulin-depend 99.7 1.8E-16 3.9E-21 89.5 5.3 72 3-81 136-211 (382)
134 cd05108 PTKc_EGFR Catalytic do 99.7 1.8E-16 4E-21 87.3 5.2 75 3-81 110-184 (316)
135 cd05632 STKc_GRK5 Catalytic do 99.7 2.4E-16 5.3E-21 85.8 5.5 73 2-81 102-174 (285)
136 KOG0690 Serine/threonine prote 99.7 1.2E-16 2.7E-21 88.3 4.4 70 6-81 272-341 (516)
137 KOG1027 Serine/threonine prote 99.7 1.5E-16 3.2E-21 95.0 5.0 75 4-81 608-687 (903)
138 cd05111 PTK_HER3 Pseudokinase 99.7 3.4E-16 7.3E-21 85.0 6.0 76 2-81 109-184 (279)
139 cd05104 PTKc_Kit Catalytic dom 99.7 2.8E-16 6.1E-21 88.5 5.9 76 2-81 214-289 (375)
140 cd05079 PTKc_Jak1_rpt2 Catalyt 99.7 2.6E-16 5.7E-21 85.5 5.5 77 2-81 109-185 (284)
141 cd05605 STKc_GRK4_like Catalyt 99.7 2.4E-16 5.3E-21 85.8 5.3 72 3-81 103-174 (285)
142 KOG0580 Serine/threonine prote 99.7 1.2E-16 2.7E-21 84.6 3.8 70 4-81 126-195 (281)
143 KOG0605 NDR and related serine 99.7 1.4E-16 3E-21 91.4 4.0 47 4-53 243-289 (550)
144 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.6 3.5E-16 7.6E-21 84.9 5.3 77 2-81 107-183 (283)
145 cd05101 PTKc_FGFR2 Catalytic d 99.6 4.8E-16 1E-20 85.2 5.9 75 3-81 138-212 (304)
146 KOG0586 Serine/threonine prote 99.6 1.8E-16 3.9E-21 91.9 4.3 72 4-82 157-228 (596)
147 PRK13184 pknD serine/threonine 99.6 3.1E-16 6.8E-21 95.5 5.5 76 3-81 114-204 (932)
148 cd07849 STKc_ERK1_2_like Catal 99.6 3.2E-16 6.9E-21 87.0 5.1 75 3-80 107-181 (336)
149 cd05109 PTKc_HER2 Catalytic do 99.6 5E-16 1.1E-20 84.2 5.7 76 2-81 109-184 (279)
150 KOG0604 MAP kinase-activated p 99.6 2.6E-16 5.6E-21 85.9 4.5 72 3-81 162-236 (400)
151 KOG4645 MAPKKK (MAP kinase kin 99.6 2.1E-16 4.6E-21 97.8 4.6 73 7-82 1339-1412(1509)
152 cd05115 PTKc_Zap-70 Catalytic 99.6 4.7E-16 1E-20 83.6 5.4 77 2-81 95-171 (257)
153 cd06625 STKc_MEKK3_like Cataly 99.6 9.5E-16 2.1E-20 82.3 6.4 76 3-81 105-180 (263)
154 cd07861 STKc_CDK1_euk Catalyti 99.6 5.3E-16 1.1E-20 84.1 5.4 73 3-81 102-174 (285)
155 cd07839 STKc_CDK5 Catalytic do 99.6 3.2E-16 7E-21 85.0 4.6 73 3-81 100-172 (284)
156 cd05630 STKc_GRK6 Catalytic do 99.6 6.2E-16 1.3E-20 84.3 5.6 72 3-81 103-174 (285)
157 cd08223 STKc_Nek4 Catalytic do 99.6 9.9E-16 2.1E-20 82.0 6.2 74 2-81 102-175 (257)
158 cd06643 STKc_SLK Catalytic dom 99.6 8.5E-16 1.8E-20 83.4 6.0 73 2-80 103-175 (282)
159 cd05116 PTKc_Syk Catalytic dom 99.6 7.3E-16 1.6E-20 82.7 5.7 77 2-81 95-171 (257)
160 cd05048 PTKc_Ror Catalytic Dom 99.6 7.9E-16 1.7E-20 83.5 5.8 75 3-81 125-199 (283)
161 cd05091 PTKc_Ror2 Catalytic do 99.6 3.1E-16 6.7E-21 85.1 4.2 75 3-81 125-199 (283)
162 cd05062 PTKc_IGF-1R Catalytic 99.6 4.1E-16 8.8E-21 84.5 4.5 75 3-81 120-194 (277)
163 KOG0194 Protein tyrosine kinas 99.6 1.5E-16 3.3E-21 91.2 2.9 74 2-81 262-335 (474)
164 cd05094 PTKc_TrkC Catalytic do 99.6 8.7E-16 1.9E-20 83.8 5.6 76 2-81 123-198 (291)
165 KOG1026 Nerve growth factor re 99.6 2.2E-16 4.8E-21 94.0 3.5 76 2-81 603-678 (774)
166 cd05040 PTKc_Ack_like Catalyti 99.6 6.5E-16 1.4E-20 82.8 5.0 77 2-81 97-173 (257)
167 cd06651 STKc_MEKK3 Catalytic d 99.6 6.9E-16 1.5E-20 83.2 5.1 76 3-81 107-182 (266)
168 cd07842 STKc_CDK8_like Catalyt 99.6 6.1E-16 1.3E-20 84.9 5.0 75 3-80 109-187 (316)
169 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.6 7E-16 1.5E-20 83.7 5.1 77 2-81 108-184 (284)
170 cd05606 STKc_beta_ARK Catalyti 99.6 6.3E-16 1.4E-20 83.9 4.8 72 2-81 97-168 (278)
171 cd05077 PTK_Jak1_rpt1 Pseudoki 99.6 1.2E-15 2.6E-20 82.3 5.6 70 2-81 105-181 (262)
172 cd05633 STKc_GRK3 Catalytic do 99.6 5.3E-16 1.2E-20 84.3 4.2 71 2-80 97-167 (279)
173 cd06652 STKc_MEKK2 Catalytic d 99.6 9.2E-16 2E-20 82.6 5.1 76 3-81 107-182 (265)
174 cd05105 PTKc_PDGFR_alpha Catal 99.6 1.2E-15 2.7E-20 86.7 5.8 75 3-81 238-312 (400)
175 cd05082 PTKc_Csk Catalytic dom 99.6 1E-15 2.2E-20 82.1 5.2 71 2-81 102-172 (256)
176 KOG1095 Protein tyrosine kinas 99.6 1.8E-16 3.9E-21 96.8 2.5 76 2-81 802-877 (1025)
177 cd05052 PTKc_Abl Catalytic dom 99.6 1.4E-15 3.1E-20 81.9 5.5 74 3-81 105-178 (263)
178 KOG0587 Traf2- and Nck-interac 99.6 2.6E-15 5.6E-20 90.3 6.9 70 6-81 127-196 (953)
179 cd05072 PTKc_Lyn Catalytic dom 99.6 1.3E-15 2.9E-20 81.8 5.3 75 2-81 103-177 (261)
180 cd05103 PTKc_VEGFR2 Catalytic 99.6 1.7E-15 3.8E-20 84.4 5.9 75 2-80 179-253 (343)
181 cd07870 STKc_PFTAIRE2 Catalyti 99.6 1.6E-15 3.5E-20 82.6 5.7 73 3-81 104-176 (291)
182 cd06637 STKc_TNIK Catalytic do 99.6 6.7E-16 1.5E-20 83.3 4.2 73 3-81 112-184 (272)
183 KOG0596 Dual specificity; seri 99.6 9.7E-16 2.1E-20 88.8 4.9 74 3-81 461-534 (677)
184 cd07834 STKc_MAPK Catalytic do 99.6 1.9E-15 4.1E-20 83.6 5.9 76 3-81 104-179 (330)
185 cd06649 PKc_MEK2 Catalytic dom 99.6 2E-15 4.3E-20 83.8 6.0 71 3-81 104-175 (331)
186 cd05058 PTKc_Met_Ron Catalytic 99.6 1.5E-15 3.2E-20 81.6 5.3 76 3-81 99-175 (262)
187 cd05093 PTKc_TrkB Catalytic do 99.6 1.6E-15 3.4E-20 82.6 5.5 75 3-81 121-195 (288)
188 cd06658 STKc_PAK5 Catalytic do 99.6 7.4E-16 1.6E-20 84.2 4.2 74 2-81 118-191 (292)
189 cd05068 PTKc_Frk_like Catalyti 99.6 3.6E-15 7.7E-20 80.2 6.8 75 2-81 103-177 (261)
190 cd05053 PTKc_FGFR Catalytic do 99.6 1.4E-15 3E-20 82.9 5.2 75 3-81 133-207 (293)
191 KOG0574 STE20-like serine/thre 99.6 6.3E-17 1.4E-21 88.8 -0.0 70 6-81 133-202 (502)
192 cd07857 STKc_MPK1 Catalytic do 99.6 1E-15 2.2E-20 84.9 4.7 75 3-80 106-181 (332)
193 cd05060 PTKc_Syk_like Catalyti 99.6 2E-15 4.4E-20 81.0 5.7 77 2-81 95-171 (257)
194 cd07843 STKc_CDC2L1 Catalytic 99.6 1.5E-15 3.2E-20 82.8 5.2 74 2-81 106-179 (293)
195 cd08529 STKc_FA2-like Catalyti 99.6 1.9E-15 4E-20 80.9 5.4 73 3-81 102-174 (256)
196 cd07841 STKc_CDK7 Catalytic do 99.6 2E-15 4.4E-20 82.4 5.7 73 2-80 102-174 (298)
197 cd05037 PTK_Jak_rpt1 Pseudokin 99.6 2E-15 4.3E-20 80.9 5.5 70 2-81 101-177 (259)
198 cd06653 STKc_MEKK3_like_1 Cata 99.6 1.2E-15 2.6E-20 82.1 4.7 76 3-81 107-182 (264)
199 cd00192 PTKc Catalytic domain 99.6 1.9E-15 4.1E-20 80.8 5.4 76 2-81 105-180 (262)
200 cd05071 PTKc_Src Catalytic dom 99.6 2.2E-15 4.7E-20 81.2 5.6 74 2-80 102-175 (262)
201 cd06619 PKc_MKK5 Catalytic dom 99.6 2.6E-15 5.6E-20 81.5 5.9 71 3-81 96-166 (279)
202 cd06645 STKc_MAP4K3 Catalytic 99.6 1.9E-15 4E-20 81.4 5.3 72 3-80 107-178 (267)
203 PRK09188 serine/threonine prot 99.6 2.4E-15 5.2E-20 84.6 5.9 74 5-81 114-193 (365)
204 cd05090 PTKc_Ror1 Catalytic do 99.6 1.7E-15 3.8E-20 82.2 5.2 75 3-81 125-199 (283)
205 cd05099 PTKc_FGFR4 Catalytic d 99.6 1.7E-15 3.6E-20 83.5 5.2 75 3-81 135-209 (314)
206 cd06644 STKc_STK10_LOK Catalyt 99.6 4E-15 8.7E-20 81.2 6.6 73 2-80 110-182 (292)
207 cd05051 PTKc_DDR Catalytic dom 99.6 1.6E-15 3.4E-20 82.7 5.0 75 3-81 131-205 (296)
208 cd05032 PTKc_InsR_like Catalyt 99.6 1.5E-15 3.2E-20 82.1 4.8 75 3-81 120-194 (277)
209 cd05086 PTKc_Aatyk2 Catalytic 99.6 3.2E-15 7E-20 80.8 6.1 73 4-80 101-173 (268)
210 cd05069 PTKc_Yes Catalytic dom 99.6 2.7E-15 5.8E-20 80.7 5.7 75 2-81 102-176 (260)
211 cd05064 PTKc_EphR_A10 Catalyti 99.6 1.5E-15 3.2E-20 82.0 4.7 75 2-81 107-181 (266)
212 cd07850 STKc_JNK Catalytic dom 99.6 1.8E-15 3.9E-20 84.5 5.2 72 3-81 119-190 (353)
213 cd05075 PTKc_Axl Catalytic dom 99.6 1.9E-15 4.2E-20 81.5 5.1 75 3-81 113-187 (272)
214 cd05059 PTKc_Tec_like Catalyti 99.6 1.7E-15 3.6E-20 81.3 4.9 75 2-81 100-174 (256)
215 cd07837 STKc_CdkB_plant Cataly 99.6 2.4E-15 5.2E-20 82.0 5.4 74 2-81 110-184 (295)
216 cd07873 STKc_PCTAIRE1 Catalyti 99.6 1.3E-15 2.8E-20 83.4 4.4 72 3-80 105-176 (301)
217 cd05100 PTKc_FGFR3 Catalytic d 99.6 2.7E-15 5.8E-20 83.3 5.7 76 2-81 134-209 (334)
218 cd05070 PTKc_Fyn_Yrk Catalytic 99.6 2.5E-15 5.4E-20 80.7 5.3 74 2-80 102-175 (260)
219 cd05114 PTKc_Tec_Rlk Catalytic 99.6 2.8E-15 6E-20 80.4 5.5 75 2-81 100-174 (256)
220 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.6 3.1E-15 6.8E-20 80.7 5.6 75 3-81 101-175 (269)
221 cd05098 PTKc_FGFR1 Catalytic d 99.6 1.6E-15 3.6E-20 83.2 4.6 76 2-81 140-215 (307)
222 PF00069 Pkinase: Protein kina 99.6 2.6E-15 5.5E-20 80.4 5.2 74 2-81 98-171 (260)
223 cd05110 PTKc_HER4 Catalytic do 99.6 2.6E-15 5.7E-20 82.3 5.3 75 3-81 110-184 (303)
224 cd05113 PTKc_Btk_Bmx Catalytic 99.6 3.3E-15 7.1E-20 80.3 5.5 75 2-81 100-174 (256)
225 cd06659 STKc_PAK6 Catalytic do 99.6 1.2E-15 2.6E-20 83.6 3.9 73 3-81 118-190 (297)
226 cd07847 STKc_CDKL1_4 Catalytic 99.6 2.7E-15 5.8E-20 81.4 5.2 74 2-81 100-173 (286)
227 cd07845 STKc_CDK10 Catalytic d 99.6 2.6E-15 5.6E-20 82.5 5.1 74 2-81 108-181 (309)
228 cd07865 STKc_CDK9 Catalytic do 99.6 2.4E-15 5.2E-20 82.3 5.0 76 2-80 119-195 (310)
229 cd07852 STKc_MAPK15 Catalytic 99.6 3.5E-15 7.5E-20 82.9 5.6 76 2-80 107-184 (337)
230 cd05097 PTKc_DDR_like Catalyti 99.6 3.4E-15 7.3E-20 81.6 5.5 75 3-81 130-204 (295)
231 cd08229 STKc_Nek7 Catalytic do 99.6 2.1E-15 4.5E-20 81.2 4.6 73 3-81 107-179 (267)
232 cd08228 STKc_Nek6 Catalytic do 99.6 2.2E-15 4.8E-20 81.1 4.6 73 3-81 107-179 (267)
233 PHA02988 hypothetical protein; 99.6 1.6E-15 3.5E-20 82.7 4.2 71 2-81 122-193 (283)
234 cd07832 STKc_CCRK Catalytic do 99.6 3.8E-15 8.3E-20 80.8 5.6 75 2-81 99-173 (286)
235 cd05089 PTKc_Tie1 Catalytic do 99.6 2.7E-15 5.9E-20 82.1 5.0 72 3-81 120-191 (297)
236 cd05035 PTKc_Axl_like Catalyti 99.6 4.9E-15 1.1E-19 79.9 5.9 75 3-81 114-188 (273)
237 cd05049 PTKc_Trk Catalytic dom 99.6 5.2E-15 1.1E-19 80.1 6.0 75 3-81 123-197 (280)
238 PLN03224 probable serine/threo 99.6 3.8E-15 8.3E-20 86.6 5.8 74 3-81 310-383 (507)
239 cd06617 PKc_MKK3_6 Catalytic d 99.6 2.9E-15 6.2E-20 81.2 5.0 72 3-81 104-176 (283)
240 cd05063 PTKc_EphR_A2 Catalytic 99.6 3.9E-15 8.5E-20 80.2 5.4 77 2-81 107-183 (268)
241 cd05085 PTKc_Fer Catalytic dom 99.6 4.9E-15 1.1E-19 79.1 5.7 75 2-81 93-167 (250)
242 cd08219 STKc_Nek3 Catalytic do 99.6 4.8E-15 1E-19 79.4 5.7 73 3-81 101-173 (255)
243 KOG0608 Warts/lats-like serine 99.6 1.8E-15 3.9E-20 89.4 4.3 48 4-54 731-778 (1034)
244 cd06655 STKc_PAK2 Catalytic do 99.6 3.1E-15 6.7E-20 81.9 5.0 74 2-81 115-188 (296)
245 cd06650 PKc_MEK1 Catalytic dom 99.6 3.1E-15 6.7E-20 83.2 5.0 71 3-81 104-175 (333)
246 cd06638 STKc_myosinIIIA Cataly 99.6 4.9E-15 1.1E-19 80.5 5.7 71 4-80 126-196 (286)
247 cd05066 PTKc_EphR_A Catalytic 99.6 3.7E-15 7.9E-20 80.4 5.1 77 2-81 106-182 (267)
248 cd07860 STKc_CDK2_3 Catalytic 99.6 3.8E-15 8.3E-20 80.8 5.2 73 3-81 101-173 (284)
249 cd05092 PTKc_TrkA Catalytic do 99.6 4.8E-15 1E-19 80.5 5.6 76 2-81 122-197 (280)
250 KOG0665 Jun-N-terminal kinase 99.6 4.2E-15 9.1E-20 81.5 5.3 71 4-81 120-190 (369)
251 cd06654 STKc_PAK1 Catalytic do 99.6 1.7E-15 3.7E-20 82.9 3.9 74 2-81 116-189 (296)
252 cd05061 PTKc_InsR Catalytic do 99.6 3.9E-15 8.4E-20 81.1 5.0 75 3-81 120-194 (288)
253 cd07844 STKc_PCTAIRE_like Cata 99.6 3.4E-15 7.3E-20 81.3 4.8 73 3-81 104-176 (291)
254 cd06646 STKc_MAP4K5 Catalytic 99.6 4.3E-15 9.4E-20 80.0 5.1 72 3-80 107-178 (267)
255 cd05613 STKc_MSK1_N N-terminal 99.6 5.9E-15 1.3E-19 80.4 5.6 74 3-81 106-179 (290)
256 KOG0200 Fibroblast/platelet-de 99.6 3.9E-15 8.4E-20 88.3 5.2 77 2-81 418-494 (609)
257 KOG4279 Serine/threonine prote 99.6 2.7E-15 5.9E-20 89.5 4.5 70 6-81 679-749 (1226)
258 cd07877 STKc_p38alpha_MAPK14 C 99.6 4E-15 8.6E-20 83.0 5.0 69 3-80 121-189 (345)
259 cd05073 PTKc_Hck Catalytic dom 99.6 7.4E-15 1.6E-19 79.0 5.9 75 2-81 102-176 (260)
260 KOG1989 ARK protein kinase fam 99.6 2E-15 4.4E-20 90.0 4.0 79 2-81 144-228 (738)
261 cd06639 STKc_myosinIIIB Cataly 99.6 4.9E-15 1.1E-19 80.7 5.2 72 3-80 129-200 (291)
262 cd07846 STKc_CDKL2_3 Catalytic 99.6 4.8E-15 1E-19 80.5 5.1 74 2-81 100-173 (286)
263 cd07831 STKc_MOK Catalytic dom 99.6 4.8E-15 1E-19 80.3 5.0 71 2-80 100-170 (282)
264 cd05107 PTKc_PDGFR_beta Cataly 99.6 7.1E-15 1.5E-19 83.6 5.8 75 3-81 240-314 (401)
265 cd07833 STKc_CDKL Catalytic do 99.6 7.1E-15 1.5E-19 79.8 5.5 74 3-81 101-174 (288)
266 cd05057 PTKc_EGFR_like Catalyt 99.6 8.3E-15 1.8E-19 79.4 5.7 75 2-80 109-183 (279)
267 cd05045 PTKc_RET Catalytic dom 99.6 4.2E-15 9.1E-20 81.0 4.6 74 3-80 128-201 (290)
268 cd07855 STKc_ERK5 Catalytic do 99.6 4.8E-15 1E-19 82.3 4.9 75 3-80 108-183 (334)
269 PHA03390 pk1 serine/threonine- 99.6 8.5E-15 1.8E-19 79.2 5.7 70 2-81 109-179 (267)
270 cd07840 STKc_CDK9_like Catalyt 99.6 8.5E-15 1.9E-19 79.3 5.7 75 2-81 100-174 (287)
271 cd05088 PTKc_Tie2 Catalytic do 99.6 2.8E-15 6E-20 82.3 3.8 72 3-81 125-196 (303)
272 cd05055 PTKc_PDGFR Catalytic d 99.6 6.5E-15 1.4E-19 80.9 5.2 76 2-81 141-216 (302)
273 cd05033 PTKc_EphR Catalytic do 99.6 6.9E-15 1.5E-19 79.3 5.2 76 2-81 106-181 (266)
274 cd07830 STKc_MAK_like Catalyti 99.6 1.3E-14 2.8E-19 78.7 6.2 72 2-80 99-170 (283)
275 cd08224 STKc_Nek6_Nek7 Catalyt 99.6 1.1E-14 2.3E-19 78.4 5.9 73 3-81 107-179 (267)
276 cd07866 STKc_BUR1 Catalytic do 99.6 5.1E-15 1.1E-19 81.1 4.7 76 3-81 116-199 (311)
277 cd05056 PTKc_FAK Catalytic dom 99.6 1.3E-14 2.9E-19 78.3 6.2 75 2-81 107-181 (270)
278 cd05047 PTKc_Tie Catalytic dom 99.6 5.4E-15 1.2E-19 79.9 4.7 72 3-81 113-184 (270)
279 KOG0695 Serine/threonine prote 99.6 9E-15 1.9E-19 81.5 5.6 73 4-82 353-425 (593)
280 cd07835 STKc_CDK1_like Catalyt 99.6 7.7E-15 1.7E-19 79.6 5.3 74 2-81 99-172 (283)
281 cd06613 STKc_MAP4K3_like Catal 99.6 9.1E-15 2E-19 78.4 5.5 73 3-81 102-174 (262)
282 cd05580 STKc_PKA Catalytic dom 99.6 8.8E-15 1.9E-19 79.8 5.5 70 3-81 102-171 (290)
283 cd06626 STKc_MEKK4 Catalytic d 99.6 9.6E-15 2.1E-19 78.4 5.6 76 3-81 100-176 (264)
284 cd06656 STKc_PAK3 Catalytic do 99.6 4.6E-15 9.9E-20 81.3 4.3 73 3-81 116-188 (297)
285 cd08221 STKc_Nek9 Catalytic do 99.6 1.1E-14 2.4E-19 78.0 5.7 73 3-81 102-174 (256)
286 PF07714 Pkinase_Tyr: Protein 99.6 4.6E-15 9.9E-20 80.0 4.1 76 2-81 103-178 (259)
287 cd05067 PTKc_Lck_Blk Catalytic 99.6 1.2E-14 2.6E-19 78.1 5.7 75 2-81 102-176 (260)
288 cd05084 PTKc_Fes Catalytic dom 99.6 1.1E-14 2.3E-19 77.9 5.4 76 2-81 94-169 (252)
289 cd06636 STKc_MAP4K4_6 Catalyti 99.6 6.2E-15 1.3E-19 80.0 4.5 72 4-81 123-194 (282)
290 cd06608 STKc_myosinIII_like Ca 99.6 6.4E-15 1.4E-19 79.4 4.5 72 3-80 114-185 (275)
291 cd07838 STKc_CDK4_6_like Catal 99.6 1.2E-14 2.6E-19 78.8 5.7 73 2-81 107-179 (287)
292 cd05046 PTK_CCK4 Pseudokinase 99.6 8.2E-15 1.8E-19 79.2 5.0 75 2-81 117-191 (275)
293 PLN00009 cyclin-dependent kina 99.6 1.1E-14 2.3E-19 79.5 5.4 72 4-81 104-176 (294)
294 cd06607 STKc_TAO Catalytic dom 99.6 2.2E-14 4.7E-19 78.9 6.6 69 2-80 115-183 (307)
295 cd07864 STKc_CDK12 Catalytic d 99.6 7.5E-15 1.6E-19 80.3 4.8 74 2-80 116-189 (302)
296 cd07879 STKc_p38delta_MAPK13 C 99.6 5.4E-15 1.2E-19 82.4 4.3 70 3-81 118-187 (342)
297 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.6 1E-14 2.2E-19 78.4 5.2 70 2-81 100-177 (258)
298 cd05038 PTKc_Jak_rpt2 Catalyti 99.6 1.2E-14 2.7E-19 78.7 5.5 77 2-81 109-185 (284)
299 KOG4257 Focal adhesion tyrosin 99.6 3.4E-15 7.3E-20 88.1 3.4 74 3-81 492-565 (974)
300 cd06642 STKc_STK25-YSK1 Cataly 99.6 1.1E-14 2.3E-19 79.0 5.2 73 3-81 102-174 (277)
301 smart00219 TyrKc Tyrosine kina 99.6 1.6E-14 3.4E-19 77.2 5.8 74 2-80 103-176 (258)
302 cd05148 PTKc_Srm_Brk Catalytic 99.6 9.5E-15 2.1E-19 78.4 4.9 73 2-80 104-176 (261)
303 cd06648 STKc_PAK_II Catalytic 99.6 9.1E-15 2E-19 79.7 4.8 73 3-81 116-188 (285)
304 cd05083 PTKc_Chk Catalytic dom 99.6 1.4E-14 3E-19 77.6 5.4 70 3-81 101-170 (254)
305 cd06917 STKc_NAK1_like Catalyt 99.6 8.8E-15 1.9E-19 79.2 4.7 74 2-81 101-174 (277)
306 KOG0196 Tyrosine kinase, EPH ( 99.6 3.9E-15 8.5E-20 89.1 3.5 75 2-81 731-807 (996)
307 cd06609 STKc_MST3_like Catalyt 99.5 1.1E-14 2.3E-19 78.8 4.9 74 2-81 98-171 (274)
308 cd07836 STKc_Pho85 Catalytic d 99.5 7.5E-15 1.6E-19 79.6 4.4 73 2-80 100-172 (284)
309 cd06612 STKc_MST1_2 Catalytic 99.5 1E-14 2.2E-19 78.0 4.7 74 2-81 99-172 (256)
310 cd06616 PKc_MKK4 Catalytic dom 99.5 8.3E-15 1.8E-19 79.7 4.4 73 3-81 108-180 (288)
311 cd05043 PTK_Ryk Pseudokinase d 99.5 1.1E-14 2.4E-19 78.9 4.9 76 2-81 117-192 (280)
312 cd07880 STKc_p38gamma_MAPK12 C 99.5 8.5E-15 1.8E-19 81.7 4.5 71 2-81 118-188 (343)
313 cd05610 STKc_MASTL Catalytic d 99.5 1.4E-14 3E-19 86.7 5.6 71 3-79 105-175 (669)
314 cd05036 PTKc_ALK_LTK Catalytic 99.5 1.2E-14 2.5E-19 78.9 4.8 76 2-81 116-194 (277)
315 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.5 1.8E-14 3.8E-19 78.2 5.5 70 2-81 117-193 (274)
316 cd06618 PKc_MKK7 Catalytic dom 99.5 1.2E-14 2.7E-19 79.4 4.9 72 3-81 115-187 (296)
317 cd07858 STKc_TEY_MAPK_plant Ca 99.5 1.2E-14 2.5E-19 80.9 4.8 72 3-80 109-180 (337)
318 cd05576 STKc_RPK118_like Catal 99.5 1.6E-14 3.4E-19 77.0 5.0 70 3-81 86-155 (237)
319 cd05044 PTKc_c-ros Catalytic d 99.5 1.7E-14 3.7E-19 77.7 5.3 76 2-81 106-186 (269)
320 cd05118 STKc_CMGC Catalytic do 99.5 2.3E-14 5E-19 77.6 5.7 74 2-81 98-171 (283)
321 cd07829 STKc_CDK_like Catalyti 99.5 1.8E-14 3.9E-19 78.0 5.3 74 2-81 98-171 (282)
322 cd06622 PKc_MAPKK_PBS2_like Ca 99.5 2E-14 4.4E-19 78.1 5.5 71 3-81 103-174 (286)
323 cd05034 PTKc_Src_like Catalyti 99.5 1E-14 2.2E-19 78.3 4.3 75 2-81 103-177 (261)
324 PTZ00266 NIMA-related protein 99.5 1E-14 2.2E-19 89.7 4.5 74 3-80 119-213 (1021)
325 cd06611 STKc_SLK_like Catalyti 99.5 1.2E-14 2.6E-19 78.8 4.2 73 2-80 103-175 (280)
326 cd06628 STKc_MAPKKK_Byr2_like 99.5 1.8E-14 3.8E-19 77.6 4.8 76 3-81 107-185 (267)
327 cd06615 PKc_MEK Catalytic doma 99.5 2.8E-14 6E-19 78.5 5.6 71 3-81 100-171 (308)
328 cd05112 PTKc_Itk Catalytic dom 99.5 2.8E-14 6.1E-19 76.4 5.5 75 2-81 100-174 (256)
329 cd05095 PTKc_DDR2 Catalytic do 99.5 2.2E-14 4.7E-19 78.5 5.1 74 3-80 131-204 (296)
330 cd06635 STKc_TAO1 Catalytic do 99.5 2.6E-14 5.6E-19 78.9 5.4 69 2-80 125-193 (317)
331 cd06624 STKc_ASK Catalytic dom 99.5 3.6E-14 7.9E-19 76.5 5.9 72 3-80 109-181 (268)
332 cd05074 PTKc_Tyro3 Catalytic d 99.5 2.5E-14 5.4E-19 77.2 5.1 74 3-80 114-187 (273)
333 cd07854 STKc_MAPK4_6 Catalytic 99.5 1.6E-14 3.5E-19 80.5 4.5 75 3-80 115-190 (342)
334 cd05039 PTKc_Csk_like Catalyti 99.5 2.6E-14 5.5E-19 76.6 5.1 71 2-81 102-172 (256)
335 cd08218 STKc_Nek1 Catalytic do 99.5 1.9E-14 4E-19 77.1 4.5 73 3-81 102-174 (256)
336 cd08217 STKc_Nek2 Catalytic do 99.5 3.5E-14 7.6E-19 76.1 5.5 77 2-81 105-183 (265)
337 cd05065 PTKc_EphR_B Catalytic 99.5 3E-14 6.5E-19 76.9 5.3 77 2-81 106-184 (269)
338 cd05611 STKc_Rim15_like Cataly 99.5 2.7E-14 5.8E-19 76.7 5.1 69 3-81 98-166 (260)
339 cd05572 STKc_cGK_PKG Catalytic 99.5 2.9E-14 6.3E-19 76.7 5.2 72 3-81 94-165 (262)
340 cd06657 STKc_PAK4 Catalytic do 99.5 1.9E-14 4.1E-19 78.8 4.5 74 2-81 116-189 (292)
341 cd05583 STKc_MSK_N N-terminal 99.5 2.4E-14 5.3E-19 77.9 4.7 74 3-81 106-179 (288)
342 cd08216 PK_STRAD Pseudokinase 99.5 5.8E-14 1.3E-18 77.2 6.2 76 3-81 102-181 (314)
343 cd05574 STKc_phototropin_like 99.5 2.9E-14 6.3E-19 78.5 5.0 50 3-55 104-153 (316)
344 cd06640 STKc_MST4 Catalytic do 99.5 4.2E-14 9.2E-19 76.7 5.5 73 3-81 102-174 (277)
345 cd06647 STKc_PAK_I Catalytic d 99.5 3.5E-14 7.7E-19 77.7 5.1 73 3-81 116-188 (293)
346 cd05050 PTKc_Musk Catalytic do 99.5 3.1E-14 6.7E-19 77.5 4.8 75 3-81 131-205 (288)
347 cd06627 STKc_Cdc7_like Catalyt 99.5 3.8E-14 8.3E-19 75.6 5.1 74 2-81 99-172 (254)
348 KOG4717 Serine/threonine prote 99.5 3E-14 6.6E-19 82.9 4.8 72 4-82 120-192 (864)
349 cd06610 STKc_OSR1_SPAK Catalyt 99.5 3.1E-14 6.7E-19 76.5 4.4 76 3-81 103-179 (267)
350 cd06633 STKc_TAO3 Catalytic do 99.5 6.4E-14 1.4E-18 77.3 5.7 69 2-80 121-189 (313)
351 cd05041 PTKc_Fes_like Catalyti 99.5 6.7E-14 1.5E-18 74.8 5.6 75 3-81 94-168 (251)
352 PTZ00024 cyclin-dependent prot 99.5 6.4E-14 1.4E-18 77.8 5.7 76 3-81 120-206 (335)
353 cd06631 STKc_YSK4 Catalytic do 99.5 3.8E-14 8.2E-19 76.3 4.6 76 3-81 103-181 (265)
354 cd05579 STKc_MAST_like Catalyt 99.5 4.3E-14 9.2E-19 75.8 4.7 76 3-81 94-174 (265)
355 cd06641 STKc_MST3 Catalytic do 99.5 6E-14 1.3E-18 76.1 5.3 74 2-81 101-174 (277)
356 KOG1152 Signal transduction se 99.5 3.3E-14 7.1E-19 83.2 4.4 70 5-82 673-742 (772)
357 KOG0603 Ribosomal protein S6 k 99.5 5.5E-14 1.2E-18 82.2 5.3 70 3-81 416-486 (612)
358 cd08215 STKc_Nek Catalytic dom 99.5 5.2E-14 1.1E-18 75.1 4.9 73 3-81 104-176 (258)
359 cd05122 PKc_STE Catalytic doma 99.5 5.4E-14 1.2E-18 74.7 4.9 73 2-81 98-170 (253)
360 cd08227 PK_STRAD_alpha Pseudok 99.5 5.6E-14 1.2E-18 77.9 5.1 76 3-81 102-181 (327)
361 cd05577 STKc_GRK Catalytic dom 99.5 3.7E-14 8.1E-19 76.9 4.2 72 3-81 96-167 (277)
362 cd07851 STKc_p38 Catalytic dom 99.5 3.1E-14 6.6E-19 79.4 4.0 70 2-80 118-187 (343)
363 KOG1094 Discoidin domain recep 99.5 2.5E-14 5.4E-19 83.8 3.6 74 3-80 638-711 (807)
364 cd08528 STKc_Nek10 Catalytic d 99.5 1.1E-13 2.3E-18 74.7 5.9 72 3-81 114-186 (269)
365 KOG1151 Tousled-like protein k 99.5 1.4E-13 3E-18 79.1 6.5 77 3-80 569-652 (775)
366 KOG1006 Mitogen-activated prot 99.5 5.8E-15 1.3E-19 79.7 0.9 65 11-81 176-240 (361)
367 cd06623 PKc_MAPKK_plant_like C 99.5 6.8E-14 1.5E-18 75.1 5.1 73 3-81 100-173 (264)
368 cd06632 STKc_MEKK1_plant Catal 99.5 5.4E-14 1.2E-18 75.2 4.6 71 3-80 103-173 (258)
369 cd06629 STKc_MAPKKK_Bck1_like 99.5 1.1E-13 2.4E-18 74.8 5.8 75 3-81 109-183 (272)
370 KOG0610 Putative serine/threon 99.5 2E-13 4.3E-18 77.0 6.7 47 4-53 181-227 (459)
371 cd08220 STKc_Nek8 Catalytic do 99.5 9.7E-14 2.1E-18 74.3 5.3 72 3-81 102-174 (256)
372 cd06634 STKc_TAO2 Catalytic do 99.5 6.2E-14 1.4E-18 77.2 4.6 68 3-80 116-183 (308)
373 KOG4250 TANK binding protein k 99.5 7.4E-14 1.6E-18 82.6 5.1 72 3-81 121-196 (732)
374 cd06614 STKc_PAK Catalytic dom 99.5 9.1E-14 2E-18 75.6 4.8 74 2-81 116-189 (286)
375 cd05581 STKc_PDK1 Catalytic do 99.5 9.5E-14 2.1E-18 75.0 4.9 77 2-81 102-195 (280)
376 cd05609 STKc_MAST Catalytic do 99.5 1.4E-13 3E-18 75.6 5.5 76 3-81 102-189 (305)
377 cd06630 STKc_MEKK1 Catalytic d 99.5 9.3E-14 2E-18 74.8 4.7 76 3-81 104-181 (268)
378 cd05578 STKc_Yank1 Catalytic d 99.5 9.4E-14 2E-18 74.5 4.7 72 3-81 101-172 (258)
379 cd05123 STKc_AGC Catalytic dom 99.5 2.5E-13 5.4E-18 72.5 6.2 74 2-81 93-166 (250)
380 KOG0671 LAMMER dual specificit 99.5 2.7E-13 5.8E-18 75.8 6.3 72 2-82 192-283 (415)
381 cd07856 STKc_Sty1_Hog1 Catalyt 99.5 1.7E-13 3.8E-18 76.1 5.4 69 4-81 110-178 (328)
382 cd06605 PKc_MAPKK Catalytic do 99.5 5.3E-14 1.2E-18 75.6 3.2 71 3-81 101-172 (265)
383 cd08530 STKc_CNK2-like Catalyt 99.5 1.7E-13 3.7E-18 73.2 4.8 71 3-81 104-174 (256)
384 KOG4278 Protein tyrosine kinas 99.4 6.4E-14 1.4E-18 83.1 2.8 72 4-80 367-438 (1157)
385 cd06621 PKc_MAPKK_Pek1_like Ca 99.4 2.5E-13 5.5E-18 74.0 4.9 71 3-81 106-176 (287)
386 cd08222 STKc_Nek11 Catalytic d 99.4 3.2E-13 6.8E-18 72.6 4.9 71 3-80 107-177 (260)
387 cd06606 STKc_MAPKKK Catalytic 99.4 3.1E-13 6.8E-18 72.1 4.9 76 2-81 101-176 (260)
388 cd08225 STKc_Nek5 Catalytic do 99.4 1.8E-13 3.9E-18 73.3 3.8 74 2-81 101-175 (257)
389 KOG2345 Serine/threonine prote 99.4 3.1E-13 6.7E-18 72.4 4.4 78 3-81 128-211 (302)
390 PLN00113 leucine-rich repeat r 99.4 5.3E-13 1.2E-17 82.3 6.1 73 1-81 779-851 (968)
391 cd06620 PKc_MAPKK_Byr1_like Ca 99.4 2.2E-13 4.7E-18 74.1 3.8 72 3-81 104-175 (284)
392 smart00750 KIND kinase non-cat 99.4 7.8E-13 1.7E-17 67.6 5.2 61 2-81 17-77 (176)
393 cd08226 PK_STRAD_beta Pseudoki 99.4 6.4E-13 1.4E-17 73.7 5.1 76 3-81 102-181 (328)
394 KOG0607 MAP kinase-interacting 99.4 1.4E-12 2.9E-17 72.4 4.9 75 3-80 177-258 (463)
395 KOG0670 U4/U6-associated splic 99.4 1.6E-12 3.5E-17 75.8 5.2 72 3-82 537-609 (752)
396 KOG0199 ACK and related non-re 99.4 7.3E-13 1.6E-17 79.3 3.6 76 3-81 213-288 (1039)
397 KOG1345 Serine/threonine kinas 99.4 1.1E-12 2.4E-17 71.3 3.9 47 6-55 125-173 (378)
398 KOG0668 Casein kinase II, alph 99.3 1.7E-12 3.7E-17 69.3 4.3 70 5-81 135-205 (338)
399 KOG0590 Checkpoint kinase and 99.3 3.9E-12 8.4E-17 75.6 6.2 75 4-81 422-497 (601)
400 cd05145 RIO1_like RIO kinase f 99.3 5.8E-12 1.3E-16 65.6 5.4 51 3-57 118-169 (190)
401 KOG1165 Casein kinase (serine/ 99.3 6.3E-12 1.4E-16 70.0 5.6 73 2-77 124-205 (449)
402 smart00220 S_TKc Serine/Threon 99.3 3.4E-12 7.4E-17 67.4 4.5 72 2-80 87-158 (244)
403 KOG0576 Mitogen-activated prot 99.3 1.2E-12 2.6E-17 77.7 2.9 68 6-79 116-183 (829)
404 KOG1025 Epidermal growth facto 99.3 2.6E-12 5.5E-17 78.0 3.2 76 2-81 798-873 (1177)
405 cd05147 RIO1_euk RIO kinase fa 99.3 8.7E-12 1.9E-16 65.0 4.7 49 3-55 118-167 (190)
406 cd00180 PKc Catalytic domain o 99.3 2.1E-11 4.5E-16 63.0 5.4 74 2-81 92-166 (215)
407 COG0515 SPS1 Serine/threonine 99.2 2.1E-11 4.6E-16 66.2 5.2 76 3-81 102-181 (384)
408 smart00221 STYKc Protein kinas 99.2 3.4E-11 7.4E-16 63.2 5.1 73 3-80 99-171 (225)
409 KOG1024 Receptor-like protein 99.2 1.5E-11 3.3E-16 69.8 3.9 74 3-81 397-471 (563)
410 KOG1164 Casein kinase (serine/ 99.2 3.3E-11 7.3E-16 67.1 4.8 74 2-78 122-207 (322)
411 KOG1163 Casein kinase (serine/ 99.2 5.4E-11 1.2E-15 64.1 5.0 72 2-76 111-189 (341)
412 PRK12274 serine/threonine prot 99.2 9.1E-11 2E-15 62.0 5.0 49 5-56 94-143 (218)
413 smart00090 RIO RIO-like kinase 99.1 1.9E-10 4.2E-15 61.8 5.2 50 4-57 150-200 (237)
414 KOG1167 Serine/threonine prote 99.1 1.1E-10 2.4E-15 66.1 4.2 48 3-53 133-181 (418)
415 cd05144 RIO2_C RIO kinase fami 99.1 4.5E-10 9.8E-15 58.8 5.1 50 4-56 127-176 (198)
416 PRK01723 3-deoxy-D-manno-octul 99.0 7.9E-10 1.7E-14 59.5 4.2 47 7-56 147-193 (239)
417 cd05119 RIO RIO kinase family, 99.0 1.6E-09 3.4E-14 56.1 4.9 50 3-56 115-165 (187)
418 KOG1033 eIF-2alpha kinase PEK/ 99.0 9.6E-11 2.1E-15 67.9 0.2 73 3-81 360-435 (516)
419 PF14531 Kinase-like: Kinase-l 98.9 2.2E-09 4.9E-14 59.1 3.9 68 4-80 147-214 (288)
420 PRK14879 serine/threonine prot 98.9 4.4E-09 9.5E-14 55.3 4.9 47 4-54 97-143 (211)
421 PRK09605 bifunctional UGMP fam 98.9 2.5E-09 5.4E-14 63.2 4.1 48 4-55 430-477 (535)
422 KOG0606 Microtubule-associated 98.9 9.8E-10 2.1E-14 68.4 2.3 68 11-81 152-231 (1205)
423 KOG4158 BRPK/PTEN-induced prot 98.9 9.3E-09 2E-13 59.1 5.6 75 4-81 343-424 (598)
424 TIGR03724 arch_bud32 Kae1-asso 98.9 7.2E-09 1.6E-13 54.1 4.7 45 6-54 94-138 (199)
425 KOG0603 Ribosomal protein S6 k 98.8 7.8E-10 1.7E-14 65.4 -0.0 65 7-81 102-166 (612)
426 PRK10345 hypothetical protein; 98.7 2.4E-08 5.2E-13 53.0 4.4 45 6-53 108-158 (210)
427 KOG1240 Protein kinase contain 98.7 1.3E-08 2.9E-13 64.1 3.5 45 5-52 123-167 (1431)
428 PRK10359 lipopolysaccharide co 98.7 4E-08 8.7E-13 52.8 3.9 45 7-55 140-184 (232)
429 cd05120 APH_ChoK_like Aminogly 98.7 1.1E-07 2.4E-12 47.1 5.3 51 3-53 87-137 (155)
430 KOG1166 Mitotic checkpoint ser 98.6 7.1E-08 1.5E-12 60.3 4.7 50 3-55 795-851 (974)
431 KOG1023 Natriuretic peptide re 98.5 2E-07 4.4E-12 54.7 3.3 74 5-81 51-124 (484)
432 KOG0590 Checkpoint kinase and 98.4 1.1E-07 2.4E-12 57.2 1.5 76 4-81 125-202 (601)
433 KOG1290 Serine/threonine prote 98.4 3.6E-07 7.8E-12 53.6 3.4 37 3-41 188-224 (590)
434 cd05146 RIO3_euk RIO kinase fa 98.3 2E-06 4.3E-11 45.4 5.0 47 5-55 127-174 (197)
435 KOG1266 Protein kinase [Signal 98.3 1.3E-06 2.8E-11 49.5 4.2 47 3-50 177-223 (458)
436 COG3642 Mn2+-dependent serine/ 98.3 2.1E-06 4.5E-11 45.0 4.6 45 6-54 96-140 (204)
437 cd05151 ChoK Choline Kinase (C 98.3 2.4E-06 5.1E-11 43.5 4.9 44 6-53 87-135 (170)
438 TIGR01982 UbiB 2-polyprenylphe 98.2 7.2E-06 1.6E-10 48.0 5.8 48 6-56 260-308 (437)
439 PF06293 Kdo: Lipopolysacchari 98.2 7.1E-06 1.5E-10 43.5 4.6 49 4-55 120-171 (206)
440 PRK15123 lipopolysaccharide co 98.1 7E-06 1.5E-10 45.3 4.5 47 4-53 140-193 (268)
441 KOG3087 Serine/threonine prote 98.1 1.2E-05 2.5E-10 42.5 4.5 47 5-54 116-165 (229)
442 COG4248 Uncharacterized protei 97.9 5.7E-05 1.2E-09 44.6 5.7 74 1-81 116-189 (637)
443 PF01163 RIO1: RIO1 family; I 97.9 0.00014 3.1E-09 38.2 6.5 47 5-55 109-156 (188)
444 KOG0601 Cyclin-dependent kinas 97.7 2.2E-05 4.8E-10 46.8 1.6 66 13-81 233-301 (524)
445 PF12260 PIP49_C: Protein-kina 97.7 0.00022 4.8E-09 37.5 5.1 52 1-52 58-109 (188)
446 PRK09902 hypothetical protein; 97.6 0.00019 4.1E-09 38.5 4.2 47 4-53 130-178 (216)
447 KOG0195 Integrin-linked kinase 97.6 0.00012 2.6E-09 41.0 3.3 71 2-81 289-359 (448)
448 KOG2137 Protein kinase [Signal 97.6 0.00012 2.7E-09 44.8 3.5 71 9-81 106-182 (700)
449 PRK04750 ubiB putative ubiquin 97.3 0.0008 1.7E-08 40.7 4.5 34 23-56 278-315 (537)
450 PF06176 WaaY: Lipopolysacchar 97.2 0.0011 2.4E-08 35.9 4.3 41 8-52 141-181 (229)
451 KOG1243 Protein kinase [Genera 96.8 0.0034 7.3E-08 38.9 4.4 45 8-54 110-154 (690)
452 COG0478 RIO-like serine/threon 96.8 0.0043 9.2E-08 34.9 4.2 39 9-50 209-247 (304)
453 COG5072 ALK1 Serine/threonine 96.3 0.017 3.6E-07 34.2 4.8 51 1-54 320-370 (488)
454 KOG0601 Cyclin-dependent kinas 96.2 0.0027 5.9E-08 38.3 1.3 47 4-53 368-415 (524)
455 cd05154 ACAD10_11_like Acyl-Co 96.1 0.0093 2E-07 31.5 2.9 30 23-52 173-204 (223)
456 cd05155 APH_ChoK_like_1 Unchar 96.0 0.012 2.5E-07 31.9 3.1 31 23-53 163-193 (235)
457 PRK05231 homoserine kinase; Pr 95.6 0.013 2.9E-07 33.0 2.4 31 23-53 186-216 (319)
458 PF01636 APH: Phosphotransfera 95.3 0.017 3.8E-07 30.6 2.1 31 23-53 165-196 (239)
459 cd05150 APH Aminoglycoside 3'- 95.2 0.024 5.3E-07 30.7 2.6 31 23-53 162-192 (244)
460 COG3173 Predicted aminoglycosi 95.2 0.032 6.9E-07 32.0 3.1 31 23-53 197-227 (321)
461 COG1718 RIO1 Serine/threonine 95.2 0.074 1.6E-06 29.7 4.3 46 5-53 169-214 (268)
462 KOG3741 Poly(A) ribonuclease s 95.0 0.14 3E-06 31.8 5.2 50 3-55 394-443 (655)
463 PF07387 Seadorna_VP7: Seadorn 94.9 0.083 1.8E-06 29.4 4.0 37 13-50 152-188 (308)
464 TIGR00938 thrB_alt homoserine 94.9 0.031 6.6E-07 31.5 2.5 30 23-52 186-215 (307)
465 cd05610 STKc_MASTL Catalytic d 94.9 0.017 3.7E-07 36.0 1.5 46 35-81 508-553 (669)
466 cd05153 HomoserineK_II Homoser 94.8 0.029 6.3E-07 31.3 2.3 31 23-53 174-204 (296)
467 cd05157 ETNK_euk Ethanolamine 94.7 0.12 2.6E-06 27.8 4.4 31 23-53 169-200 (235)
468 TIGR02172 Fb_sc_TIGR02172 Fibr 94.6 0.056 1.2E-06 29.3 3.0 30 23-53 152-181 (226)
469 KOG1290 Serine/threonine prote 94.6 0.017 3.8E-07 35.0 1.1 35 41-81 390-424 (590)
470 cd05156 ChoK_euk Choline Kinas 94.5 0.29 6.4E-06 27.5 5.7 31 23-53 178-212 (302)
471 cd05152 MPH2' Macrolide 2'-Pho 94.4 0.061 1.3E-06 30.1 2.8 31 23-53 184-215 (276)
472 TIGR02721 ycfN_thiK thiamine k 94.0 0.074 1.6E-06 29.1 2.7 28 24-52 146-173 (256)
473 COG2334 Putative homoserine ki 93.8 0.29 6.2E-06 28.4 4.7 27 26-52 199-226 (331)
474 KOG2268 Serine/threonine prote 93.7 0.21 4.6E-06 29.5 4.1 35 13-50 213-247 (465)
475 KOG0606 Microtubule-associated 93.6 0.1 2.2E-06 34.7 3.0 40 8-50 910-949 (1205)
476 PRK10271 thiK thiamine kinase; 93.4 0.11 2.4E-06 27.6 2.6 29 24-53 77-105 (188)
477 TIGR02906 spore_CotS spore coa 93.2 0.13 2.7E-06 28.9 2.8 29 23-52 186-214 (313)
478 TIGR02904 spore_ysxE spore coa 93.0 0.29 6.3E-06 27.7 4.0 31 23-53 195-225 (309)
479 PRK06149 hypothetical protein; 92.2 0.5 1.1E-05 31.2 4.7 30 23-52 207-241 (972)
480 PRK06148 hypothetical protein; 92.0 0.84 1.8E-05 30.5 5.4 31 23-53 202-235 (1013)
481 COG0510 ycfN Thiamine kinase a 91.7 0.92 2E-05 25.5 4.8 29 24-52 153-181 (269)
482 PRK09550 mtnK methylthioribose 91.1 1 2.2E-05 27.0 4.8 29 23-52 222-250 (401)
483 PF01633 Choline_kinase: Choli 91.0 0.21 4.5E-06 26.6 1.9 30 24-53 143-173 (211)
484 smart00587 CHK ZnF_C4 abd HLH 90.8 0.33 7.1E-06 25.8 2.5 31 23-53 119-154 (196)
485 PLN02236 choline kinase 90.1 0.46 1E-05 27.6 2.8 31 23-53 199-230 (344)
486 COG0661 AarF Predicted unusual 89.4 0.61 1.3E-05 28.8 3.1 34 23-56 283-316 (517)
487 PRK11768 serine/threonine prot 87.7 2.4 5.3E-05 24.4 4.6 29 23-53 195-223 (325)
488 PHA03111 Ser/Thr kinase; Provi 87.4 4.5 9.7E-05 24.3 5.4 34 7-40 284-318 (444)
489 TIGR01767 MTRK 5-methylthiorib 85.2 3.7 8E-05 24.5 4.5 29 23-52 191-219 (370)
490 PLN02876 acyl-CoA dehydrogenas 85.2 1.3 2.8E-05 28.9 2.9 30 24-53 225-256 (822)
491 PLN02421 phosphotransferase, a 84.7 1.5 3.2E-05 25.3 2.8 30 24-53 182-212 (330)
492 COG3178 Predicted phosphotrans 84.4 5.2 0.00011 23.5 4.7 28 23-50 199-230 (351)
493 PRK12396 5-methylribose kinase 84.1 4.3 9.3E-05 24.6 4.5 29 23-52 226-254 (409)
494 PLN02756 S-methyl-5-thioribose 81.5 7.7 0.00017 23.7 4.8 27 23-50 229-255 (418)
495 PF13095 FTA2: Kinetochore Sim 79.7 5.3 0.00011 21.9 3.6 37 7-51 169-205 (207)
496 KOG1235 Predicted unusual prot 77.8 11 0.00023 23.9 4.8 33 23-55 319-355 (538)
497 PF02958 EcKinase: Ecdysteroid 77.5 1.7 3.7E-05 24.4 1.5 30 23-52 214-248 (294)
498 PF05445 Pox_ser-thr_kin: Poxv 76.6 4.4 9.6E-05 24.4 2.9 17 23-39 297-313 (434)
499 PF10140 YukC: WXG100 protein 72.8 3.9 8.4E-05 24.3 2.1 47 3-54 60-106 (359)
500 PF10707 YrbL-PhoP_reg: PhoP r 71.8 12 0.00027 20.2 3.7 24 15-41 131-154 (199)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=3.2e-23 Score=115.84 Aligned_cols=78 Identities=40% Similarity=0.650 Sum_probs=65.4
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCcc-ccccCccCcce
Q 040586 1 MKHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKL-IGTLGFIAPEC 79 (82)
Q Consensus 1 ~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pe~ 79 (82)
|.+|++++.++|.||.|||..+..+++|+|+++.||++|.+...|++|||++...+..... .... .||.+|++||+
T Consensus 173 W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~---~~~~~~gt~gY~~PEy 249 (361)
T KOG1187|consen 173 WETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTS---VSTTVMGTFGYLAPEY 249 (361)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccc---eeeecCCCCccCChhh
Confidence 8999999999999999999887888999999999999999999999999999554431111 1122 78999999998
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 250 ~~ 251 (361)
T KOG1187|consen 250 AS 251 (361)
T ss_pred hc
Confidence 74
No 2
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=2.5e-22 Score=114.03 Aligned_cols=76 Identities=22% Similarity=0.295 Sum_probs=64.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.-.++.|++.||.||| .++++|||+|..|+|++.++.+|++|||+++++....... ....+.|.||+|||++.
T Consensus 218 ~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~--~T~rVvTLWYRpPELLL 292 (560)
T KOG0600|consen 218 PQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP--YTSRVVTLWYRPPELLL 292 (560)
T ss_pred HHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcc--cccceEEeeccChHHhc
Confidence 356778999999999999 9999999999999999999999999999998876544332 22557799999999986
Q ss_pred C
Q 040586 82 T 82 (82)
Q Consensus 82 ~ 82 (82)
+
T Consensus 293 G 293 (560)
T KOG0600|consen 293 G 293 (560)
T ss_pred C
Confidence 4
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.87 E-value=3.8e-22 Score=111.46 Aligned_cols=75 Identities=33% Similarity=0.573 Sum_probs=63.3
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCC-eEeecCCCCCEEEccCC-ceEEeecceeeecCCCCccccCCCccccccCccCcc
Q 040586 1 MKHRLKVAMEIANAVAYLHVRFSRP-IVFRDIKPSTLLFQERN-VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 1 ~~~~~~~~~~i~~~l~~lh~~~~~~-~~h~~l~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 78 (82)
|+.++.++.+|+.||.||| .++ +||+|+|+.|++++.+. .+||+|||+++....... ......||+.|||||
T Consensus 141 ~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~---~~~~~~GT~~wMAPE 214 (362)
T KOG0192|consen 141 LKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT---SMTSVAGTYRWMAPE 214 (362)
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccc---cccCCCCCccccChh
Confidence 3568899999999999999 777 99999999999999997 999999999977654331 112368899999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
+++
T Consensus 215 v~~ 217 (362)
T KOG0192|consen 215 VLR 217 (362)
T ss_pred hhc
Confidence 986
No 4
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.2e-22 Score=109.35 Aligned_cols=76 Identities=22% Similarity=0.408 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHHHHhhcCC-CCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRF-SRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~-~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+++..|++.|+..+|+.- ...++|||+||.||+++.++.+|+.|||+++.+.+...-. ...+|||+||+||.+.
T Consensus 125 ~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA---~S~VGTPyYMSPE~i~ 201 (375)
T KOG0591|consen 125 TVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFA---HSLVGTPYYMSPERIH 201 (375)
T ss_pred HHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHH---HhhcCCCcccCHHHHh
Confidence 56788999999999999421 1249999999999999999999999999998876554432 2679999999999875
No 5
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.86 E-value=5.1e-22 Score=108.40 Aligned_cols=74 Identities=26% Similarity=0.362 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
....++.|++.|+.||| +++++|||+||.|+++++.+.+|++|||+++.+..+... ....++|.||+|||++.+
T Consensus 121 ~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~---yt~evvTlWYRaPEvLlG 194 (323)
T KOG0594|consen 121 LIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT---YTPEVVTLWYRAPEVLLG 194 (323)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc---ccccEEEeeccCHHHhcC
Confidence 35678899999999999 999999999999999999999999999999866543322 235688999999998753
No 6
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.86 E-value=4.7e-22 Score=109.15 Aligned_cols=72 Identities=31% Similarity=0.496 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..-++.+|+.||.||| +++++|||+||+||+++..+.+++.|||++...-.... ....++||+.|||||++.
T Consensus 127 arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~---~t~tfcGT~eYmAPEil~ 198 (357)
T KOG0598|consen 127 ARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD---ATRTFCGTPEYMAPEILL 198 (357)
T ss_pred HHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC---ccccccCCccccChHHHh
Confidence 4457899999999999 99999999999999999999999999999964332221 122579999999999875
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1e-21 Score=113.04 Aligned_cols=73 Identities=27% Similarity=0.421 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..++.||+.|+.||| +.+++|||++..|++++++..+|++|||+|..+....... .+.+|||.|.|||++.
T Consensus 119 Eary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk---~TlCGTPNYIAPEVl~ 191 (592)
T KOG0575|consen 119 EARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK---KTLCGTPNYIAPEVLN 191 (592)
T ss_pred HHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCccccc---ceecCCCcccChhHhc
Confidence 56778999999999999 9999999999999999999999999999997766443332 2679999999999874
No 8
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.86 E-value=4.7e-22 Score=109.26 Aligned_cols=73 Identities=32% Similarity=0.527 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
.+-.++.+++.||.|||. ...+||||+||+|+++...+.+|++|||++..+... ....++||..|||||-+.+
T Consensus 179 ~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----~a~tfvGT~~YMsPERi~g 251 (364)
T KOG0581|consen 179 VLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----IANTFVGTSAYMSPERISG 251 (364)
T ss_pred HHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-----hcccccccccccChhhhcC
Confidence 345678999999999993 278999999999999999999999999999776544 1226799999999998764
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.85 E-value=7.6e-22 Score=109.71 Aligned_cols=72 Identities=26% Similarity=0.480 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC------CceEEeecceeeecCCCCccccCCCccccccCccC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER------NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIA 76 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (82)
....++.|++.|+++|| +++++|||+||.|++++.. -.+|++|||+++......... +.+|++.|||
T Consensus 110 t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~----tlcGSplYMA 182 (429)
T KOG0595|consen 110 TARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAE----TLCGSPLYMA 182 (429)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHH----HhhCCccccC
Confidence 35678899999999999 9999999999999999865 457999999998877544332 6799999999
Q ss_pred cceec
Q 040586 77 PECMT 81 (82)
Q Consensus 77 pe~~~ 81 (82)
||++.
T Consensus 183 PEV~~ 187 (429)
T KOG0595|consen 183 PEVIM 187 (429)
T ss_pred HHHHH
Confidence 99874
No 10
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.2e-21 Score=105.58 Aligned_cols=72 Identities=31% Similarity=0.592 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|+..|+.|+| +++++|+|++++||+++++.+++++|||.+..+..+...- ..+|||+|+|||.+.
T Consensus 124 ~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLr----elCGTPgYLAPEtik 195 (411)
T KOG0599|consen 124 ETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLR----ELCGTPGYLAPETIK 195 (411)
T ss_pred HHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceeeccCCchhHH----HhcCCCcccChhhee
Confidence 45678999999999999 9999999999999999999999999999998766554332 568999999999885
No 11
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.85 E-value=2.4e-21 Score=104.66 Aligned_cols=71 Identities=34% Similarity=0.533 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
....++.||+.|++|+| ++.+++||++|+|++++.++.+|+.|||.+..+.... ...+|||-|+|||.+.+
T Consensus 145 ~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT------~TlCGTPeYLAPEii~s 215 (355)
T KOG0616|consen 145 HARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT------WTLCGTPEYLAPEIIQS 215 (355)
T ss_pred hHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCcE------EEecCCccccChHHhhc
Confidence 35668999999999999 9999999999999999999999999999997665332 26689999999998763
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.84 E-value=7.5e-21 Score=104.33 Aligned_cols=76 Identities=28% Similarity=0.457 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-CCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....+..|++.|+.|+| +++++|+|++++|++++. ++.+|++|||++.................||+.|||||++.
T Consensus 118 ~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~ 194 (313)
T KOG0198|consen 118 LVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIR 194 (313)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhc
Confidence 46778999999999999 999999999999999999 79999999999876554222222333678999999999876
No 13
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.84 E-value=2.9e-21 Score=103.13 Aligned_cols=73 Identities=23% Similarity=0.282 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
.-.|+.+++.|+.||| .+.++|||+||.|+++++++.+|++|||+++.+........ ..+.|.||+|||++.+
T Consensus 103 iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~---~~V~TRWYRAPELLfG 175 (318)
T KOG0659|consen 103 IKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT---HQVVTRWYRAPELLFG 175 (318)
T ss_pred HHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc---cceeeeeccChHHhcc
Confidence 4567889999999999 99999999999999999999999999999998876554432 2267999999998864
No 14
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=2.4e-21 Score=108.16 Aligned_cols=70 Identities=33% Similarity=0.557 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC---CceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER---NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
-++.|++.|+.||| +++++|||+||+||++..+ ..+|+.|||+++..+.. +...+++||+.|.|||++.+
T Consensus 280 ~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~----sfm~TlCGTpsYvAPEVl~~ 352 (475)
T KOG0615|consen 280 LLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG----SFMKTLCGTPSYVAPEVLAS 352 (475)
T ss_pred HHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhccccc----eehhhhcCCccccChhheec
Confidence 36789999999999 9999999999999999876 78899999999776522 22347899999999999863
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.84 E-value=2.2e-21 Score=105.40 Aligned_cols=73 Identities=22% Similarity=0.397 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
...++.|++.|+.|+| ++++||||++|+||+++.++.+|++|||+|+.+..+.... ...+.|.||+|||++.+
T Consensus 103 vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y---TDYVATRWYRaPELLvG 175 (396)
T KOG0593|consen 103 VKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY---TDYVATRWYRAPELLVG 175 (396)
T ss_pred HHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh---hhhhhhhhccChhhhcc
Confidence 5678899999999999 9999999999999999999999999999998776433322 24577999999998853
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=3.7e-21 Score=108.84 Aligned_cols=72 Identities=21% Similarity=0.376 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+..+|+.||+.||.|+| ++++.|||+||+|+++..+..+|++|||+|+...+..... ..+.|.||+|||++.
T Consensus 111 ~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT----eYVSTRWYRAPEvLL 182 (538)
T KOG0661|consen 111 DIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT----EYVSTRWYRAPEVLL 182 (538)
T ss_pred HHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccCCCcc----hhhhcccccchHHhh
Confidence 56789999999999999 9999999999999999999999999999998877655432 568899999999874
No 17
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=7.8e-21 Score=106.63 Aligned_cols=73 Identities=33% Similarity=0.509 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceeeecC-CCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSISIP-EGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.|+++|+.||| .++++|||+|++|++++.+ +.+|+.|||++.... .... ....+|++.|+|||++
T Consensus 121 ~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~----l~t~cGsp~Y~aPEvl 193 (370)
T KOG0583|consen 121 EARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGL----LKTFCGSPAYAAPEVL 193 (370)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCc----ccCCCCCcccCCHHHh
Confidence 45678899999999999 9999999999999999999 999999999997653 2222 2366899999999998
Q ss_pred cC
Q 040586 81 TT 82 (82)
Q Consensus 81 ~~ 82 (82)
.+
T Consensus 194 ~~ 195 (370)
T KOG0583|consen 194 SG 195 (370)
T ss_pred CC
Confidence 63
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.83 E-value=3.4e-21 Score=111.36 Aligned_cols=76 Identities=24% Similarity=0.451 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.++++.|++.||.||| +++|||+|+++.||++.+++.+++.|||++...... ..........|...|||||+++
T Consensus 488 ~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w-~g~~q~~qp~gsilwmAPEvIR 563 (678)
T KOG0193|consen 488 NTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW-SGEQQLEQPHGSLLWMAPEVIR 563 (678)
T ss_pred HHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeee-ccccccCCCccchhhhcHHHHh
Confidence 467899999999999999 999999999999999999999999999998643322 2222233557888999999875
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.82 E-value=1.3e-20 Score=107.89 Aligned_cols=75 Identities=27% Similarity=0.494 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc------c----cCCCccccccC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH------V----NDTDKLIGTLG 73 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~------~----~~~~~~~~~~~ 73 (82)
...++.||+.+++|+| ++++||||+||+|||++.++.+++.|||.+..+...... . .+...++||..
T Consensus 176 aR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAe 252 (604)
T KOG0592|consen 176 ARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAE 252 (604)
T ss_pred HHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeec
Confidence 3467899999999999 999999999999999999999999999999877542222 1 11246899999
Q ss_pred ccCcceec
Q 040586 74 FIAPECMT 81 (82)
Q Consensus 74 ~~~pe~~~ 81 (82)
|.+||+|.
T Consensus 253 YVSPElL~ 260 (604)
T KOG0592|consen 253 YVSPELLN 260 (604)
T ss_pred ccCHHHhc
Confidence 99999985
No 20
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.82 E-value=1.3e-20 Score=103.36 Aligned_cols=74 Identities=23% Similarity=0.331 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+...++.|++.|+.|+| .+-++|||++++|+++...+.+|++|||+|+.+.++... ....+.|.||+|||++.+
T Consensus 178 evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~---~T~lVVTLWYRaPELLLG 251 (419)
T KOG0663|consen 178 EVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP---YTPLVVTLWYRAPELLLG 251 (419)
T ss_pred HHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCccc---CcceEEEeeecCHHHhcC
Confidence 34557799999999999 999999999999999999999999999999988776433 225678999999998753
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=4.3e-20 Score=105.81 Aligned_cols=73 Identities=29% Similarity=0.522 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.+++.||.||| .++++|+|++.+||+++.++.+|+.|||++..+..... .....+|||+|||||++.
T Consensus 370 qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---KR~TmVGTPYWMAPEVvt 442 (550)
T KOG0578|consen 370 QIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---KRSTMVGTPYWMAPEVVT 442 (550)
T ss_pred HHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC---ccccccCCCCccchhhhh
Confidence 34567899999999999 99999999999999999999999999998866554332 233679999999999864
No 22
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.82 E-value=4.1e-20 Score=104.64 Aligned_cols=72 Identities=33% Similarity=0.627 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.+|+.||.++| ..++++||++|+||++|+.+.++++|+|+|..+....... ..+||.+|||||++.
T Consensus 288 ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~----~rvGT~GYMAPEvl~ 359 (591)
T KOG0986|consen 288 RARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIR----GRVGTVGYMAPEVLQ 359 (591)
T ss_pred HHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCCCccc----cccCcccccCHHHHc
Confidence 45678999999999999 9999999999999999999999999999998877665543 348999999999875
No 23
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.81 E-value=1.6e-20 Score=106.57 Aligned_cols=75 Identities=27% Similarity=0.465 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++++++.||++||.||+ ++++||||+.+.|||++.+..+||+|||+++...+..+.......+ +..|.|||.+.
T Consensus 303 ~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf--PIkWtAPEa~~ 377 (468)
T KOG0197|consen 303 PQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF--PIKWTAPEALN 377 (468)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC--CceecCHHHHh
Confidence 478999999999999999 9999999999999999999999999999999555555544433232 67899999874
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=7.8e-20 Score=103.04 Aligned_cols=73 Identities=26% Similarity=0.471 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcccc-CCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVN-DTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~ 81 (82)
-+..+++.||.|+| .++.||||+|+.||+++.++.+|++|||+............ +...++|+++|||||++.
T Consensus 130 ~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~ 203 (516)
T KOG0582|consen 130 TILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLM 203 (516)
T ss_pred HHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhh
Confidence 45689999999999 99999999999999999999999999998766554433322 225779999999999854
No 25
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=9.3e-20 Score=106.39 Aligned_cols=72 Identities=28% Similarity=0.429 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..-|+++++.||+||| +++||+||+|.+|+++|..+.+|++|||+++..- ......++++|||-|||||++.
T Consensus 470 arfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m---~~g~~TsTfCGTpey~aPEil~ 541 (694)
T KOG0694|consen 470 ARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM---GQGDRTSTFCGTPEFLAPEVLT 541 (694)
T ss_pred HHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccC---CCCCccccccCChhhcChhhhc
Confidence 4557899999999999 9999999999999999999999999999986432 2233455889999999999875
No 26
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.79 E-value=1e-19 Score=99.50 Aligned_cols=76 Identities=22% Similarity=0.347 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC----CceEEeecceeeecCCCCccccCCCccccccCccCcce
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER----NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 79 (82)
+..++.|++.|+.||| ++=++|||++|.||++..+ +.+|++|+|+++.+..+..........+.|+||+|||+
T Consensus 134 vKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPEL 210 (438)
T KOG0666|consen 134 VKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPEL 210 (438)
T ss_pred HHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHH
Confidence 5578899999999999 8889999999999999766 89999999999988765444333446788999999998
Q ss_pred ecC
Q 040586 80 MTT 82 (82)
Q Consensus 80 ~~~ 82 (82)
+.+
T Consensus 211 LLG 213 (438)
T KOG0666|consen 211 LLG 213 (438)
T ss_pred hcc
Confidence 753
No 27
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.79 E-value=2.3e-19 Score=101.94 Aligned_cols=77 Identities=32% Similarity=0.553 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccc--cCCCccccccCccCcce
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHV--NDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe~ 79 (82)
.+...++..+..||.||| .+++||||+||.|+|++..+.+|++|||++..+..+.... ......+|||-|+|||+
T Consensus 210 ~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~ 286 (576)
T KOG0585|consen 210 QQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPEL 286 (576)
T ss_pred HHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHh
Confidence 357788999999999999 9999999999999999999999999999998764332111 11224689999999998
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 287 c~ 288 (576)
T KOG0585|consen 287 CS 288 (576)
T ss_pred hc
Confidence 75
No 28
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.3e-19 Score=98.13 Aligned_cols=69 Identities=30% Similarity=0.488 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+..|+..|+.||| ..++.|||+||.|++++.+ +.+|++|||.|+.+....... ....+.+|+|||++.+
T Consensus 130 Yt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni----SYicSRyYRaPELifg 199 (364)
T KOG0658|consen 130 YTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI----SYICSRYYRAPELIFG 199 (364)
T ss_pred HHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce----eEEEeccccCHHHHcC
Confidence 5789999999999 8999999999999999976 789999999998776554432 4566899999999864
No 29
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.77 E-value=5.5e-19 Score=100.15 Aligned_cols=81 Identities=23% Similarity=0.432 Sum_probs=67.2
Q ss_pred ChhHHHHHHHHHHHHHHhhcCC------CCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCc
Q 040586 1 MKHRLKVAMEIANAVAYLHVRF------SRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGF 74 (82)
Q Consensus 1 ~~~~~~~~~~i~~~l~~lh~~~------~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (82)
|....+++..++.||.|||.+. +.+|.|||+++.|+++..+..+-++|||++..+.......... ..+||.+|
T Consensus 306 w~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~-~qVGT~RY 384 (534)
T KOG3653|consen 306 WNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTH-GQVGTRRY 384 (534)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchh-hhhhhhhh
Confidence 5677889999999999999543 3479999999999999999999999999998877555443333 36899999
Q ss_pred cCcceecC
Q 040586 75 IAPECMTT 82 (82)
Q Consensus 75 ~~pe~~~~ 82 (82)
||||++.+
T Consensus 385 MAPEvLEg 392 (534)
T KOG3653|consen 385 MAPEVLEG 392 (534)
T ss_pred cCHHHHhh
Confidence 99998853
No 30
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.77 E-value=8e-19 Score=96.49 Aligned_cols=75 Identities=24% Similarity=0.396 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEE----ccCCceEEeecceeeecCCCCccccCCCccccccCccCcce
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLF----QERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 79 (82)
...++.|++.|+.|+| +++++|+|++|+|+++ +..+.+|+.|||++.................||+.|+|||.
T Consensus 110 ~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~ 186 (317)
T cd07868 110 VKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL 186 (317)
T ss_pred HHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHH
Confidence 5678899999999999 8999999999999999 45568999999999765543322222234578999999997
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 187 ~~ 188 (317)
T cd07868 187 LL 188 (317)
T ss_pred Hc
Confidence 64
No 31
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.77 E-value=4.4e-19 Score=100.07 Aligned_cols=73 Identities=25% Similarity=0.361 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+...++.||.+++.||| +++++|+|++.+||+++.++++|++|||++..+....... .++|++-|.+||++.+
T Consensus 154 EaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLq----TFCGSPLYASPEIvNG 226 (668)
T KOG0611|consen 154 EARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQ----TFCGSPLYASPEIVNG 226 (668)
T ss_pred HHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccccHHH----HhcCCcccCCccccCC
Confidence 45788999999999999 9999999999999999999999999999987665544333 6789999999998764
No 32
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=4.2e-19 Score=97.57 Aligned_cols=73 Identities=23% Similarity=0.335 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.-++.|++.|++|+| +.+++|||++|.|++++.+...|++|||+++..... .........+.|.||+|||++.
T Consensus 128 q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~~~~~mTeYVaTRWYRAPElll 200 (359)
T KOG0660|consen 128 QYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-FEDGFMTEYVATRWYRAPELLL 200 (359)
T ss_pred HHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeecccc-CcccchhcceeeeeecCHHHHh
Confidence 345789999999999 889999999999999999999999999999876543 2222223557799999999864
No 33
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.76 E-value=2.1e-19 Score=101.47 Aligned_cols=74 Identities=23% Similarity=0.419 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+...|+.|++.|+.|+| .+.++|||+++.|+++.++..+++.|||+++........ ....+||++||+||++.+
T Consensus 107 ~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~---a~tvvGTp~YmcPEil~d 180 (426)
T KOG0589|consen 107 RILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL---ASTVVGTPYYMCPEILSD 180 (426)
T ss_pred HHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh---hheecCCCcccCHHHhCC
Confidence 46788999999999999 999999999999999999999999999999887655422 226799999999998753
No 34
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.76 E-value=1.3e-18 Score=97.69 Aligned_cols=74 Identities=24% Similarity=0.430 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +++++|+|++|+||+++.++.+|++|||++.......... .....||+.|+|||.+.
T Consensus 143 ~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~gt~~Y~aPE~~~ 216 (370)
T cd05621 143 WAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR--CDTAVGTPDYISPEVLK 216 (370)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccCCcee--cccCCCCcccCCHHHHh
Confidence 45667899999999999 8999999999999999999999999999987654322111 12457899999999763
No 35
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.76 E-value=9.6e-19 Score=96.74 Aligned_cols=77 Identities=19% Similarity=0.278 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.|++.|+.|+| +++++|+|++|.|++++.++.++++|||++.................|++.|+|||++.
T Consensus 103 ~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 179 (338)
T cd07859 103 EHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 179 (338)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHh
Confidence 345678899999999999 89999999999999999999999999999865432221111112457899999999753
No 36
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.4e-18 Score=101.76 Aligned_cols=73 Identities=27% Similarity=0.396 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+..+++.||+.|+.||| ..++.|||++++|++++....+|++|||+|.....+.... +.+|+|-|.|||++++
T Consensus 113 eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLe----TSCGSPHYA~PEIV~G 185 (786)
T KOG0588|consen 113 EAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLE----TSCGSPHYAAPEIVSG 185 (786)
T ss_pred HHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCcccc----ccCCCcccCCchhhcC
Confidence 57789999999999999 8999999999999999999999999999997665555443 4589999999999874
No 37
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.76 E-value=1.6e-18 Score=95.73 Aligned_cols=73 Identities=26% Similarity=0.424 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +.+++|+|++++||+++.++.+++.|||++........ ......|++.|+|||.+.
T Consensus 96 ~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~ 168 (323)
T cd05571 96 RARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKTFCGTPEYLAPEVLE 168 (323)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC---cccceecCccccChhhhc
Confidence 45667899999999999 89999999999999999999999999998864322111 112457899999999864
No 38
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=1.3e-18 Score=97.71 Aligned_cols=69 Identities=28% Similarity=0.482 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++.+++.|+.|+| ..+.+|+|+++.|+++...+.+|+.|||++.......... ..++||++|||||++.
T Consensus 116 ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr---~tfvGTPfwMAPEVI~ 184 (467)
T KOG0201|consen 116 ILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR---KTFVGTPFWMAPEVIK 184 (467)
T ss_pred ehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhcc---ccccccccccchhhhc
Confidence 3578899999999 8999999999999999999999999999997766554432 3789999999999986
No 39
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.75 E-value=1.5e-18 Score=96.09 Aligned_cols=74 Identities=27% Similarity=0.360 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +.+++|+|+++.||+++.++.+++.|||++.......... .....|++.|+|||.+.
T Consensus 106 ~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~ 179 (332)
T cd05614 106 EVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKER--TYSFCGTIEYMAPEIIR 179 (332)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCc--cccccCCccccCHHHhc
Confidence 45667889999999999 8999999999999999999999999999986543222111 11346899999999864
No 40
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.75 E-value=2.4e-18 Score=91.79 Aligned_cols=70 Identities=33% Similarity=0.612 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc---CCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE---RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
-.++.|++.++.||| .++++|||++|+|+++.+ ...+|+++||++..+..+.... .++|||.||+||+++
T Consensus 113 SH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~----G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 113 SHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWH----GFAGTPGYLSPEVLK 185 (355)
T ss_pred HHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccc----cccCCCcccCHHHhh
Confidence 356799999999999 999999999999999964 4578999999998877333222 568999999999874
No 41
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.75 E-value=3.6e-18 Score=94.40 Aligned_cols=73 Identities=26% Similarity=0.445 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| + .+++|+|++|.||+++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 96 ~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (325)
T cd05594 96 RARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKTFCGTPEYLAPEVLE 169 (325)
T ss_pred HHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc---cccccCCcccCCHHHHc
Confidence 46678899999999999 7 68999999999999999999999999988643222111 11346899999999764
No 42
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.75 E-value=1e-18 Score=101.33 Aligned_cols=72 Identities=24% Similarity=0.419 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEc-cCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQ-ERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
....|+.||+.||.|||+. ..++||||++++||++. ..+.+|++|+|+|........ ...+|||-|||||+.
T Consensus 144 aik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a-----ksvIGTPEFMAPEmY 216 (632)
T KOG0584|consen 144 AIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA-----KSVIGTPEFMAPEMY 216 (632)
T ss_pred HHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcccc-----ceeccCccccChHHH
Confidence 4568999999999999976 77999999999999996 567999999999966543332 256899999999975
No 43
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.75 E-value=2.4e-18 Score=97.33 Aligned_cols=75 Identities=23% Similarity=0.310 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.||.|+| +++++|+|++|+|++++..+.+++.|||++........ .......||+.|+|||++.
T Consensus 182 ~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~ 256 (391)
T PHA03212 182 CDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA--NKYYGWAGTIATNAPELLA 256 (391)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc--cccccccCccCCCChhhhc
Confidence 356788899999999999 89999999999999999999999999999854322111 1112457899999999864
No 44
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.75 E-value=2.9e-18 Score=94.16 Aligned_cols=76 Identities=24% Similarity=0.385 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEE----ccCCceEEeecceeeecCCCCccccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLF----QERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 78 (82)
.+..++.|++.||.|+| +.+++|+|++|+|+++ +.++.++++|||++.................+++.|+|||
T Consensus 109 ~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE 185 (317)
T cd07867 109 MVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 185 (317)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcH
Confidence 35678899999999999 8999999999999999 4567899999999976554332222223457889999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 186 ~~~ 188 (317)
T cd07867 186 LLL 188 (317)
T ss_pred Hhc
Confidence 764
No 45
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.75 E-value=2.9e-18 Score=95.00 Aligned_cols=73 Identities=27% Similarity=0.433 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +++++|+|++|+||+++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 96 ~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 168 (328)
T cd05593 96 RTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT---MKTFCGTPEYLAPEVLE 168 (328)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc---cccccCCcCccChhhhc
Confidence 56678899999999999 999999999999999999999999999987543221111 12446899999999864
No 46
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.74 E-value=3e-18 Score=94.86 Aligned_cols=73 Identities=26% Similarity=0.426 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|+++.||+++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (330)
T cd05586 97 RAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT---TNTFCGTTEYLAPEVLL 169 (330)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC---ccCccCCccccCHHHHc
Confidence 45667899999999999 899999999999999999999999999988543222111 12456899999999763
No 47
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.74 E-value=4.7e-18 Score=94.24 Aligned_cols=75 Identities=24% Similarity=0.403 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.|+.|+| +++++|+|++|.|++++.++.++++|||++.......... ......+++.|+|||.+.
T Consensus 175 ~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 249 (338)
T cd05102 175 DLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV-RKGSARLPLKWMAPESIF 249 (338)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchh-cccCCCCCccccCcHHhh
Confidence 56778999999999999 8999999999999999999999999999986543222111 111334567899999764
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.74 E-value=4.8e-18 Score=92.45 Aligned_cols=72 Identities=31% Similarity=0.632 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.|+.|+| +.+++|+|++|.|++++.++.+++.|||++......... ....|++.|+|||.+.
T Consensus 103 ~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~----~~~~g~~~y~aPE~~~ 174 (285)
T cd05631 103 RAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV----RGRVGTVGYMAPEVIN 174 (285)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee----cCCCCCCCccCHhhhc
Confidence 56678899999999999 899999999999999999999999999998664332211 1346899999999874
No 49
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.74 E-value=4.6e-18 Score=95.56 Aligned_cols=74 Identities=23% Similarity=0.407 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|++|+|++++.++.++++|||++.......... .....||+.|+|||++.
T Consensus 143 ~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~--~~~~~gt~~y~aPE~l~ 216 (371)
T cd05622 143 WARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR--CDTAVGTPDYISPEVLK 216 (371)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc--ccCcccCccccCHHHHh
Confidence 34567889999999999 9999999999999999999999999999987654322111 12457899999999864
No 50
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=7.7e-19 Score=102.54 Aligned_cols=66 Identities=27% Similarity=0.504 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.+.+.|+.||| +.+.||||+++.||+++..+.+|++|||.+..... ...++|||+|||||+|.
T Consensus 130 Ai~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------AnsFvGTPywMAPEVIL 195 (948)
T KOG0577|consen 130 AITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-------ANSFVGTPYWMAPEVIL 195 (948)
T ss_pred HHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc-------hhcccCCccccchhHhe
Confidence 35678889999999 99999999999999999999999999998744322 22679999999999874
No 51
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.74 E-value=3.7e-18 Score=94.34 Aligned_cols=73 Identities=30% Similarity=0.476 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +++++|+|++|+|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 102 ~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 174 (324)
T cd05587 102 HAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT---TRTFCGTPDYIAPEIIA 174 (324)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc---eeeecCCccccChhhhc
Confidence 46678899999999999 899999999999999999999999999987543221111 12446899999999864
No 52
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.74 E-value=3.2e-18 Score=94.53 Aligned_cols=73 Identities=29% Similarity=0.449 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..++.|++.|+.|+| +.+++|+|++|+|++++.++.++++|||++......... .....|++.|+|||.+.
T Consensus 102 ~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 174 (323)
T cd05616 102 HAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT---TKTFCGTPDYIAPEIIA 174 (323)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc---cccCCCChhhcCHHHhc
Confidence 56778999999999999 899999999999999999999999999988653322111 12456899999999864
No 53
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.74 E-value=4.6e-18 Score=94.00 Aligned_cols=74 Identities=28% Similarity=0.456 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.|+.|+| +++++|+|+++.||+++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 95 ~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 168 (323)
T cd05595 95 ERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGTPEYLAPEVLE 168 (323)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc---cccccCCcCcCCccccc
Confidence 356678899999999999 899999999999999999999999999987543221111 12346899999999874
No 54
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.74 E-value=5.7e-18 Score=98.23 Aligned_cols=74 Identities=18% Similarity=0.361 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| .++++|+|++|.||+++.++.+++.|||++..+....... .....|+..|+|||.+.
T Consensus 268 ~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~--~~~~~gt~~y~aPE~~~ 341 (501)
T PHA03210 268 QTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAF--DYGWVGTVATNSPEILA 341 (501)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccc--cccccCCcCCCCchhhc
Confidence 34568899999999999 8999999999999999999999999999987654332211 11347899999999864
No 55
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.74 E-value=3.6e-18 Score=92.87 Aligned_cols=72 Identities=22% Similarity=0.380 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +++++|+|++|+|++++.++.+++.|||++........ .....|++.|+|||.+.
T Consensus 111 ~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~ 182 (290)
T cd07862 111 TIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA----LTSVVVTLWYRAPEVLL 182 (290)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcc----cccccccccccChHHHh
Confidence 56778999999999999 89999999999999999999999999999876543311 12446789999999763
No 56
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.74 E-value=5.5e-18 Score=93.46 Aligned_cols=73 Identities=26% Similarity=0.457 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| .++++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (316)
T cd05592 97 RARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK---ASTFCGTPDYIAPEILK 169 (316)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCc---cccccCCccccCHHHHc
Confidence 45667899999999999 899999999999999999999999999998654322211 12457899999999764
No 57
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.73 E-value=6.4e-18 Score=94.95 Aligned_cols=74 Identities=23% Similarity=0.408 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.||.|+| +++++|+|++|+|++++.++.++++|||++.......... .....|++.|+|||.+.
T Consensus 143 ~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~ 216 (370)
T cd05596 143 WARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR--CDTAVGTPDYISPEVLK 216 (370)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc--CCCCCCCcCeECHHHhc
Confidence 34567889999999999 8999999999999999999999999999986554322111 12457899999999763
No 58
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.73 E-value=5e-18 Score=93.43 Aligned_cols=73 Identities=22% Similarity=0.390 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|++|.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 94 ~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 166 (312)
T cd05585 94 RARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK---TNTFCGTPEYLAPELLL 166 (312)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc---cccccCCcccCCHHHHc
Confidence 45678899999999999 899999999999999999999999999988643222111 12457899999999764
No 59
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.73 E-value=4.9e-18 Score=92.52 Aligned_cols=73 Identities=22% Similarity=0.388 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +++++|+|++|+|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 104 ~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 176 (288)
T cd07871 104 NVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT---YSNEVVTLWYRPPDVLL 176 (288)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc---ccCceecccccChHHhc
Confidence 45677899999999999 899999999999999999999999999998654332211 11346789999999763
No 60
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.73 E-value=5.4e-18 Score=93.70 Aligned_cols=73 Identities=33% Similarity=0.506 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (325)
T cd05602 97 RARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT---TSTFCGTPEYLAPEVLH 169 (325)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC---cccccCCccccCHHHHc
Confidence 34557899999999999 899999999999999999999999999988643221111 12456899999999764
No 61
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.73 E-value=6.6e-18 Score=97.20 Aligned_cols=76 Identities=22% Similarity=0.282 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.||.|+| .++++|+|+++.||+++.++.+++.|||++.......... ......||+.|+|||++.
T Consensus 260 ~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~~~GT~~Y~APE~~~ 335 (461)
T PHA03211 260 AQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP-FHYGIAGTVDTNAPEVLA 335 (461)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc-cccccCCCcCCcCHHHHc
Confidence 467889999999999999 8999999999999999999999999999987653221111 111346899999999864
No 62
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.73 E-value=6.7e-18 Score=93.34 Aligned_cols=73 Identities=32% Similarity=0.487 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++........ ......|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~---~~~~~~gt~~y~aPE~~~ 169 (325)
T cd05604 97 RARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD---TTTTFCGTPEYLAPEVIR 169 (325)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC---CcccccCChhhCCHHHHc
Confidence 45678899999999999 89999999999999999999999999998754322111 112446899999999864
No 63
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.73 E-value=6.5e-18 Score=93.25 Aligned_cols=73 Identities=25% Similarity=0.402 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|++|+|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (321)
T cd05591 97 RSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT---TTTFCGTPDYIAPEILQ 169 (321)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc---ccccccCccccCHHHHc
Confidence 45668899999999999 899999999999999999999999999988653322211 11446899999999764
No 64
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.73 E-value=8.1e-18 Score=92.85 Aligned_cols=73 Identities=30% Similarity=0.513 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| ..+++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (321)
T cd05603 97 RARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET---TSTFCGTPEYLAPEVLR 169 (321)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCc---cccccCCcccCCHHHhc
Confidence 34567899999999999 899999999999999999999999999987543222111 12446899999999864
No 65
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.73 E-value=1.2e-17 Score=91.37 Aligned_cols=76 Identities=17% Similarity=0.309 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc----ccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH----VNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~pe 78 (82)
....++.|++.|+.|+| +++++|+|++|+|++++.++.++++|||++..+...... ........||+.|+|||
T Consensus 127 ~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape 203 (294)
T PHA02882 127 LIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLD 203 (294)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHH
Confidence 34678899999999999 899999999999999999999999999998765432111 11112346899999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
...
T Consensus 204 ~~~ 206 (294)
T PHA02882 204 AHN 206 (294)
T ss_pred HhC
Confidence 754
No 66
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.72 E-value=1e-17 Score=91.72 Aligned_cols=73 Identities=21% Similarity=0.373 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +++++|+|++|+|++++.++.++++|||++......... .....+++.|+|||.+.
T Consensus 104 ~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 176 (303)
T cd07869 104 NVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT---YSNEVVTLWYRPPDVLL 176 (303)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc---CCCCcccCCCCChHHHc
Confidence 45678899999999999 899999999999999999999999999988654322211 11346789999999763
No 67
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.72 E-value=8.8e-18 Score=92.78 Aligned_cols=73 Identities=27% Similarity=0.434 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|++|.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (320)
T cd05590 97 RARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT---TSTFCGTPDYIAPEILQ 169 (320)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc---ccccccCccccCHHHHc
Confidence 45667899999999999 999999999999999999999999999987643221111 12446899999999764
No 68
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.72 E-value=9.2e-18 Score=92.73 Aligned_cols=73 Identities=32% Similarity=0.505 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.||.|+| +++++|+|+++.||+++.++.+++.|||++........ ......|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~ 169 (323)
T cd05575 97 RARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK---TTSTFCGTPEYLAPEVLR 169 (323)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC---ccccccCChhhcChhhhc
Confidence 35567899999999999 89999999999999999999999999998754322111 112446899999999764
No 69
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.72 E-value=5.2e-18 Score=98.55 Aligned_cols=73 Identities=26% Similarity=0.521 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.++++|+.|+| +.+++|+|++|.||+++.++.+|++|||+++.......-.. ...|||.|||||++.
T Consensus 101 ~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt---sikGtPlYmAPElv~ 173 (808)
T KOG0597|consen 101 QVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT---SIKGTPLYMAPELVE 173 (808)
T ss_pred HHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCceeee---eccCcccccCHHHHc
Confidence 56778899999999999 99999999999999999999999999999976554332222 457899999999865
No 70
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=9.6e-18 Score=102.91 Aligned_cols=76 Identities=26% Similarity=0.542 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecC------C---------CCccccCCCc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIP------E---------GKTHVNDTDK 67 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~------~---------~~~~~~~~~~ 67 (82)
..++++.+|+.||.|+| ..++||||+||.||++++++.+|+.|||++.... . ..........
T Consensus 698 ~~wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts 774 (1351)
T KOG1035|consen 698 EAWRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTS 774 (1351)
T ss_pred HHHHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccc
Confidence 45778899999999999 9999999999999999999999999999997621 0 0000112235
Q ss_pred cccccCccCcceec
Q 040586 68 LIGTLGFIAPECMT 81 (82)
Q Consensus 68 ~~~~~~~~~pe~~~ 81 (82)
.+||.-|+|||++.
T Consensus 775 ~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 775 QVGTALYVAPELLS 788 (1351)
T ss_pred ccceeeeecHHHhc
Confidence 58999999999875
No 71
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.72 E-value=7.9e-18 Score=92.84 Aligned_cols=73 Identities=26% Similarity=0.450 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +++++|+|++|+|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (316)
T cd05620 97 RATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR---ASTFCGTPDYIAPEILQ 169 (316)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc---eeccCCCcCccCHHHHc
Confidence 45677899999999999 999999999999999999999999999987543211111 12456899999999864
No 72
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.72 E-value=6.7e-18 Score=93.35 Aligned_cols=74 Identities=26% Similarity=0.424 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 101 ~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 174 (323)
T cd05615 101 PQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT---TRTFCGTPDYIAPEIIA 174 (323)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc---ccCccCCccccCHHHHc
Confidence 356778999999999999 899999999999999999999999999988643222111 12446899999999764
No 73
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.72 E-value=9.6e-18 Score=93.93 Aligned_cols=50 Identities=24% Similarity=0.396 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
+...++.|++.||.|+| +++++|+|++++|++++.++.+++.|||++...
T Consensus 102 ~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~ 151 (363)
T cd05628 102 ETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL 151 (363)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence 45678899999999999 999999999999999999999999999998643
No 74
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=1.1e-17 Score=96.93 Aligned_cols=75 Identities=23% Similarity=0.298 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.+|.|+| +++++|+|++|+||+++.++.+++.|||++.......... ......|++.|+|||.+.
T Consensus 144 ~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~-~~~~~~Gt~~Y~aPE~~~ 218 (496)
T PTZ00283 144 EAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDD-VGRTFCGTPYYVAPEIWR 218 (496)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccccc-ccccccCCcceeCHHHhC
Confidence 35567899999999999 8999999999999999999999999999987654322111 122457899999999864
No 75
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.72 E-value=1e-17 Score=92.87 Aligned_cols=73 Identities=29% Similarity=0.456 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|++|.|++++.++.++++|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (329)
T cd05618 97 HARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTFCGTPNYIAPEILR 169 (329)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc---cccccCCccccCHHHHc
Confidence 45678899999999999 899999999999999999999999999988543221111 12457899999999864
No 76
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.72 E-value=8e-18 Score=93.18 Aligned_cols=73 Identities=29% Similarity=0.438 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..++.|++.|+.|+| +++++|+|++|+|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (327)
T cd05617 97 HARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT---TSTFCGTPNYIAPEILR 169 (327)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc---eecccCCcccCCHHHHC
Confidence 46678899999999999 899999999999999999999999999988643221111 11456899999999864
No 77
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.72 E-value=1.7e-17 Score=91.77 Aligned_cols=73 Identities=27% Similarity=0.451 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 101 ~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 173 (323)
T cd05584 101 TACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV---THTFCGTIEYMAPEILM 173 (323)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc---ccccCCCccccChhhcc
Confidence 34567889999999999 899999999999999999999999999988643322211 11346899999999864
No 78
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.72 E-value=9.6e-18 Score=92.68 Aligned_cols=74 Identities=28% Similarity=0.406 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++........ ......|++.|+|||.+.
T Consensus 101 ~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~ 174 (324)
T cd05589 101 PRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD---RTSTFCGTPEFLAPEVLT 174 (324)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC---cccccccCccccCHhHhc
Confidence 356778999999999999 89999999999999999999999999998754322111 112457899999999764
No 79
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.72 E-value=7.5e-18 Score=94.00 Aligned_cols=72 Identities=21% Similarity=0.310 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.||.|+| +.+++|+|++|+|++++.++.++++|||++......... ....|++.|+|||.+.
T Consensus 120 ~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~t~~y~aPE~~~ 191 (355)
T cd07874 120 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM----TPYVVTRYYRAPEVIL 191 (355)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcccc----CCccccCCccCHHHHc
Confidence 35567899999999999 899999999999999999999999999998654332211 1346789999999764
No 80
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=1.3e-18 Score=94.20 Aligned_cols=71 Identities=25% Similarity=0.395 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+..||+.|++|+| +.+++|||++|.|.++.++...|++|||+++......... ....+.|-+|+|||++.+
T Consensus 161 FlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h--MTqEVVTQYYRAPEiLMG 231 (449)
T KOG0664|consen 161 FVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN--MTHEVVTQYYRAPELLMG 231 (449)
T ss_pred hHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchhhhhh--hHHHHHHHHhccHHHhhc
Confidence 5689999999999 8899999999999999999999999999997654333222 124467899999999864
No 81
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.72 E-value=1.1e-17 Score=93.53 Aligned_cols=73 Identities=21% Similarity=0.317 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.||.|+| .++++|+|+++.|++++..+.+++.|||++........ .....|++.|+|||.+.
T Consensus 157 ~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----~~~~~gt~~y~aPE~~~ 229 (357)
T PHA03209 157 DQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA----FLGLAGTVETNAPEVLA 229 (357)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCcc----cccccccccccCCeecC
Confidence 456788999999999999 89999999999999999999999999998854322111 11346889999999874
No 82
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.72 E-value=8.4e-18 Score=96.28 Aligned_cols=72 Identities=28% Similarity=0.418 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-ceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.||.||| +.+++|+|++|+|++++.+. .+|++|||++......... ....|++.|+|||++.
T Consensus 171 ~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~----~~~~~t~~y~aPE~~~ 243 (440)
T PTZ00036 171 LVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRS----VSYICSRFYRAPELML 243 (440)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCc----ccCCCCcCccCHHHhc
Confidence 35567889999999999 89999999999999998665 6999999998755432211 1346789999999763
No 83
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=4.9e-18 Score=91.02 Aligned_cols=76 Identities=21% Similarity=0.337 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecC-CCCccccCCCccccccCccCcceecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIP-EGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
...++.++++|+.|+| ...++|||++++|++++.++.++++|||+++.+. +......++...+.|.||++||++.+
T Consensus 126 Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG 202 (376)
T KOG0669|consen 126 IKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLG 202 (376)
T ss_pred HHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhc
Confidence 4567889999999999 9999999999999999999999999999997654 34444455666788999999998753
No 84
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.72 E-value=1.7e-17 Score=91.96 Aligned_cols=74 Identities=23% Similarity=0.366 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.+|.|+| +++++|+|+++.|++++.++.+++.|||++........... ....|++.|+|||.+.
T Consensus 103 ~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~ 176 (331)
T cd05624 103 MARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS--SVAVGTPDYISPEILQ 176 (331)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee--ccccCCcccCCHHHHh
Confidence 35567899999999999 99999999999999999999999999999866543322111 1346899999999763
No 85
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.72 E-value=1.3e-17 Score=92.05 Aligned_cols=74 Identities=30% Similarity=0.435 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 96 ~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~ 169 (316)
T cd05619 96 PRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK---TCTFCGTPDYIAPEILL 169 (316)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc---eeeecCCccccCHHHHc
Confidence 355678899999999999 899999999999999999999999999988643222111 11446899999999764
No 86
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.72 E-value=9.3e-18 Score=93.46 Aligned_cols=70 Identities=31% Similarity=0.457 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| +++++|+|++|.|++++.++.++++|||++....... ....|++.|+|||.+.
T Consensus 132 ~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~------~~~~gt~~y~aPE~~~ 201 (340)
T PTZ00426 132 VGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT------YTLCGTPEYIAPEILL 201 (340)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc------ceecCChhhcCHHHHh
Confidence 45678899999999999 8999999999999999999999999999986543221 1457899999999864
No 87
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.72 E-value=1.7e-17 Score=91.78 Aligned_cols=74 Identities=27% Similarity=0.376 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.+|.|+| +.+++|+|+++.||+++.++.+++.|||++.......... .....|++.|+|||.+.
T Consensus 103 ~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~ 176 (330)
T cd05601 103 MAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN--SKLPVGTPDYIAPEVLT 176 (330)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee--eecccCCccccCHHHhc
Confidence 34567889999999999 8999999999999999999999999999987654332221 11346789999999864
No 88
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.72 E-value=2.5e-17 Score=91.55 Aligned_cols=70 Identities=24% Similarity=0.413 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +.+++|+|++|.|++++.++.+++.|||++....... ....|++.|+|||.+.
T Consensus 119 ~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~t~~y~aPE~~~ 188 (343)
T cd07878 119 HVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEM------TGYVATRWYRAPEIML 188 (343)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceecCCCc------CCccccccccCchHhc
Confidence 45678899999999999 8999999999999999999999999999986543221 1346789999999763
No 89
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.71 E-value=1.1e-17 Score=93.67 Aligned_cols=72 Identities=21% Similarity=0.310 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +++++|+|++|.||+++.++.+++.|||++......... ....+++.|+|||.+.
T Consensus 127 ~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~----~~~~~t~~y~aPE~~~ 198 (364)
T cd07875 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM----TPYVVTRYYRAPEVIL 198 (364)
T ss_pred HHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcc----cCCcccCCcCCHHHHh
Confidence 45678899999999999 899999999999999999999999999998654332211 1346789999999864
No 90
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.71 E-value=2.3e-17 Score=92.07 Aligned_cols=72 Identities=36% Similarity=0.581 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.||.|+| +++++|+|+++.||+++.++.+++.|||++......... .....|+..|+|||.+
T Consensus 169 ~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~---~~~~~gt~~y~aPE~~ 240 (353)
T PLN00034 169 FLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP---CNSSVGTIAYMSPERI 240 (353)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc---ccccccCccccCcccc
Confidence 34678899999999999 899999999999999999999999999998765432211 1134789999999986
No 91
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.71 E-value=2e-17 Score=91.72 Aligned_cols=74 Identities=23% Similarity=0.368 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++........... ....|++.|+|||.+.
T Consensus 103 ~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~gt~~y~aPE~~~ 176 (331)
T cd05597 103 MARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS--NVAVGTPDYISPEILQ 176 (331)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc--cceeccccccCHHHHh
Confidence 45667899999999999 99999999999999999999999999999865543222111 1346899999999864
No 92
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.71 E-value=1.1e-17 Score=94.53 Aligned_cols=76 Identities=24% Similarity=0.395 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.||.|+| .++++|+|+++.|++++..+.+++.|||++........... .....||+.|+|||++.
T Consensus 185 ~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~ 260 (392)
T PHA03207 185 EQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ-CYGWSGTLETNSPELLA 260 (392)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccc-ccccccccCccCHhHhc
Confidence 467788999999999999 89999999999999999999999999999865543322111 12457899999999864
No 93
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.71 E-value=1.5e-17 Score=90.30 Aligned_cols=73 Identities=26% Similarity=0.563 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 98 ~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~ 170 (280)
T cd05608 98 RACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK---TKGYAGTPGFMAPELLQ 170 (280)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc---ccccCCCcCccCHHHhc
Confidence 45678899999999999 899999999999999999999999999998665433221 11346789999999864
No 94
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.71 E-value=1.4e-17 Score=92.26 Aligned_cols=70 Identities=31% Similarity=0.570 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++........ ...|++.|+|||.+.
T Consensus 119 ~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~ 188 (329)
T PTZ00263 119 VAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF------TLCGTPEYLAPEVIQ 188 (329)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc------eecCChhhcCHHHHc
Confidence 34567889999999999 89999999999999999999999999999876533221 346889999999864
No 95
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=9.7e-18 Score=96.49 Aligned_cols=70 Identities=30% Similarity=0.555 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..++.-++.|..||| .+++|+||++|+|++++.++++|+.|||+++........+ +++|||-|.|||++.
T Consensus 523 rF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTw----TFcGTpEYVAPEIIL 592 (732)
T KOG0614|consen 523 RFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTW----TFCGTPEYVAPEIIL 592 (732)
T ss_pred hhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCCcee----eecCCcccccchhhh
Confidence 345566789999999 9999999999999999999999999999998877666555 679999999999874
No 96
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.71 E-value=2.1e-17 Score=92.37 Aligned_cols=72 Identities=21% Similarity=0.306 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.||.|+| .++++|+|++|+||+++.++.+++.|||++........ .....|++.|+|||.+.
T Consensus 124 ~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~t~~y~aPE~~~ 195 (359)
T cd07876 124 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM----MTPYVVTRYYRAPEVIL 195 (359)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc----CCCCcccCCCCCchhcc
Confidence 35567899999999999 89999999999999999999999999999864332211 11346789999999864
No 97
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.71 E-value=3.6e-17 Score=94.46 Aligned_cols=75 Identities=21% Similarity=0.323 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +.+++|+|++|.||+++.++.+++.|||++......... .......||+.|+|||.+.
T Consensus 170 ~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~ 244 (478)
T PTZ00267 170 EVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-DVASSFCGTPYYLAPELWE 244 (478)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-ccccccCCCccccCHhHhC
Confidence 34567889999999999 899999999999999999999999999998765432211 1122456899999999764
No 98
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.71 E-value=2.4e-17 Score=92.52 Aligned_cols=74 Identities=28% Similarity=0.390 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.||.|+| +.+++|+|++++|++++.++.+++.|||++.......... .....+++.|+|||.+.
T Consensus 104 ~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~--~~~~~~~~~y~aPE~~~ 177 (372)
T cd07853 104 HVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKH--MTQEVVTQYYRAPEILM 177 (372)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccCcccc--CCCCCcCCCcCCHHHHc
Confidence 45678899999999999 8999999999999999999999999999987544322211 11335788999999764
No 99
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.71 E-value=2.4e-17 Score=91.42 Aligned_cols=74 Identities=24% Similarity=0.371 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++.......... .....|++.|+|||++.
T Consensus 103 ~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~ 176 (332)
T cd05623 103 MARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ--SSVAVGTPDYISPEILQ 176 (332)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcce--ecccccCccccCHHHHh
Confidence 45667899999999999 8999999999999999999999999999886543222111 11346899999999763
No 100
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.71 E-value=2e-17 Score=91.70 Aligned_cols=73 Identities=27% Similarity=0.443 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..++.|++.|+.|+| +++++|+|++++|++++.++.++++|||++........ ......|++.|+|||.+.
T Consensus 97 ~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~ 169 (329)
T cd05588 97 HARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD---TTSTFCGTPNYIAPEILR 169 (329)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC---ccccccCCccccCHHHHc
Confidence 56678899999999999 99999999999999999999999999998754221111 112457899999999864
No 101
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=1.5e-17 Score=98.14 Aligned_cols=73 Identities=27% Similarity=0.468 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+..-++.|++.+|.||| ++++||||+++.||++..++.++++|||++....... .....+.|||+|||||+..
T Consensus 131 QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~---qkRDsFIGTPYWMAPEVvm 203 (1187)
T KOG0579|consen 131 QIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR---QKRDSFIGTPYWMAPEVVM 203 (1187)
T ss_pred HHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHH---hhhccccCCcccccchhee
Confidence 34446789999999999 9999999999999999999999999999874322111 1123679999999999864
No 102
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.70 E-value=4.5e-17 Score=88.10 Aligned_cols=69 Identities=30% Similarity=0.595 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...+.+||.||-. +++++|||++|+||+++..+.+|++|||.+....++.... ...|.+.|||||-+.
T Consensus 196 ~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht----rsAGC~~YMaPERid 264 (391)
T KOG0983|consen 196 MTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT----RSAGCAAYMAPERID 264 (391)
T ss_pred hHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccc----cccCCccccCccccC
Confidence 34567789999875 7799999999999999999999999999998776554433 347889999999763
No 103
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.70 E-value=2.4e-17 Score=90.01 Aligned_cols=70 Identities=34% Similarity=0.572 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +++++|+|++|.|++++.++.+++.|||++....... ....|++.|+|||.+.
T Consensus 102 ~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~ 171 (291)
T cd05612 102 TGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT------WTLCGTPEYLAPEVIQ 171 (291)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc------ccccCChhhcCHHHHc
Confidence 45678899999999999 8999999999999999999999999999886543211 1346889999999764
No 104
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.70 E-value=3.6e-18 Score=99.45 Aligned_cols=72 Identities=28% Similarity=0.476 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..++|..+|+.|+.||| .+.+||||+|+.||++..+-.+|++|||.++......+ .. .+.||..|||||+|+
T Consensus 213 llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST-kM---SFaGTVaWMAPEvIr 284 (904)
T KOG4721|consen 213 LLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST-KM---SFAGTVAWMAPEVIR 284 (904)
T ss_pred HHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhh-hh---hhhhhHhhhCHHHhh
Confidence 46788999999999999 99999999999999999999999999998865443311 11 568999999999986
No 105
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.70 E-value=3.6e-17 Score=88.82 Aligned_cols=72 Identities=22% Similarity=0.346 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +.+++|+|++|.|++++.++.+++.|||++........ .....++..|+|||.+.
T Consensus 109 ~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~ 180 (288)
T cd07863 109 TIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA----LTPVVVTLWYRAPEVLL 180 (288)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccccccCccc----CCCccccccccCchHhh
Confidence 56778899999999999 89999999999999999999999999998865432221 11346788999999764
No 106
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.70 E-value=2.8e-17 Score=90.00 Aligned_cols=75 Identities=27% Similarity=0.371 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.|+.|+| +.+++|+|++|.|++++.++.++++|||++.......... ......++..|+|||.+.
T Consensus 139 ~~~~i~~~i~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 213 (304)
T cd05096 139 SLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR-IQGRAVLPIRWMAWECIL 213 (304)
T ss_pred HHHHHHHHHHHHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeE-ecCcCCCCccccCHHHHh
Confidence 46788999999999999 8999999999999999999999999999986543322211 111334577899999753
No 107
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.70 E-value=2.7e-17 Score=91.18 Aligned_cols=70 Identities=27% Similarity=0.452 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++..... ......|++.|+|||.+.
T Consensus 102 ~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~ 171 (333)
T cd05600 102 HARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------YANSVVGSPDYMAPEVLR 171 (333)
T ss_pred HHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc------ccCCcccCccccChhHhc
Confidence 45667899999999999 89999999999999999999999999998865432 112457899999999864
No 108
>PTZ00284 protein kinase; Provisional
Probab=99.70 E-value=3e-17 Score=94.51 Aligned_cols=70 Identities=16% Similarity=0.379 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCC----------------ceEEeecceeeecCCCCccccCC
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERN----------------VAKFFNFSVSISIPEGKTHVNDT 65 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~----------------~~~l~~~~~~~~~~~~~~~~~~~ 65 (82)
++..++.|++.||.|+| . .+++|+|++|+||+++..+ .+|+.|||.+...... .
T Consensus 232 ~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~------~ 302 (467)
T PTZ00284 232 HLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS------R 302 (467)
T ss_pred HHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccc------c
Confidence 45678899999999999 7 5999999999999998654 4899999976432211 1
Q ss_pred CccccccCccCcceec
Q 040586 66 DKLIGTLGFIAPECMT 81 (82)
Q Consensus 66 ~~~~~~~~~~~pe~~~ 81 (82)
....||+.|+|||++.
T Consensus 303 ~~~~gt~~Y~APE~~~ 318 (467)
T PTZ00284 303 TAIVSTRHYRSPEVVL 318 (467)
T ss_pred ccccCCccccCcHHhh
Confidence 2457899999999874
No 109
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.70 E-value=4e-17 Score=88.68 Aligned_cols=74 Identities=26% Similarity=0.459 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| ..+++|+|+++.|++++.++.+++.|||++......... ......|++.|+|||.+.
T Consensus 101 ~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~ 174 (287)
T cd07848 101 KVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA--NYTEYVATRWYRSPELLL 174 (287)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc--cccccccccccCCcHHHc
Confidence 45678899999999999 899999999999999999999999999998665332211 111346789999999764
No 110
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.70 E-value=4e-17 Score=95.86 Aligned_cols=71 Identities=25% Similarity=0.406 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-CCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
..++.|++.+|.|+| +++++|+|++|+||+++. ++.+|++|||++.......... .....+++.|+|||.+
T Consensus 258 ~~i~~qll~aL~yLH---~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~--~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 258 QTIMRQILFALDGLH---STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYI--PKEFLLDPRYAAPEQY 329 (566)
T ss_pred HHHHHHHHHHHHHHH---HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccC--CcccccCCCccChHHh
Confidence 457899999999999 899999999999999985 5789999999996543322211 1245778999999954
No 111
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.69 E-value=2e-17 Score=86.39 Aligned_cols=70 Identities=26% Similarity=0.484 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++..+..|+.|||+ +..+||||++|.|++++..+.+|++|||.+..+.++.... .-.|...|||||.+.
T Consensus 152 kIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt----~daGCkpYmaPEri~ 221 (282)
T KOG0984|consen 152 KIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT----MDAGCKPYMAPERIN 221 (282)
T ss_pred HhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH----HhcCCCccCChhhcC
Confidence 467888999999995 5689999999999999999999999999987665443322 236778999999764
No 112
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.69 E-value=4.4e-17 Score=91.76 Aligned_cols=47 Identities=26% Similarity=0.388 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++.|++.|+.|+| +.+++|+|++|+|++++.++.++++|||++.
T Consensus 103 ~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 103 ARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred HHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence 4567889999999999 8999999999999999999999999999864
No 113
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.69 E-value=4.5e-17 Score=91.11 Aligned_cols=50 Identities=24% Similarity=0.367 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
+...++.|++.||.|+| +.+++|+|++++||+++.++.+++.|||++...
T Consensus 102 ~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 151 (364)
T cd05599 102 ETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL 151 (364)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceec
Confidence 45678899999999999 899999999999999999999999999988654
No 114
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.69 E-value=3e-17 Score=90.53 Aligned_cols=73 Identities=29% Similarity=0.452 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 99 ~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~ 171 (318)
T cd05582 99 DVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK---AYSFCGTVEYMAPEVVN 171 (318)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc---eecccCChhhcCHHHHc
Confidence 46778899999999999 899999999999999999999999999988654332111 11346889999999764
No 115
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=9.9e-17 Score=90.72 Aligned_cols=79 Identities=24% Similarity=0.376 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHHHHhh-----cCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCC-CccccCCCccccccCccC
Q 040586 3 HRLKVAMEIANAVAYLH-----VRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEG-KTHVNDTDKLIGTLGFIA 76 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh-----~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 76 (82)
..++++..+++||.+|| +.++..+-|||+|+.||++.+++.+-++|+|++-...+. ..........+||.+|||
T Consensus 309 ~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMA 388 (513)
T KOG2052|consen 309 GMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMA 388 (513)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccC
Confidence 46788999999999999 445778999999999999999999999999999765543 222233346799999999
Q ss_pred cceec
Q 040586 77 PECMT 81 (82)
Q Consensus 77 pe~~~ 81 (82)
||++.
T Consensus 389 PEvLd 393 (513)
T KOG2052|consen 389 PEVLD 393 (513)
T ss_pred hHHhh
Confidence 99874
No 116
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.69 E-value=4.2e-17 Score=90.72 Aligned_cols=76 Identities=24% Similarity=0.386 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCC-----------------------
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGK----------------------- 59 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~----------------------- 59 (82)
....++.|++.||.|+| ..+++|+|++++||+++.++.+++.|||++.......
T Consensus 102 ~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (350)
T cd05573 102 TARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRR 178 (350)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccccc
Confidence 45667899999999999 8999999999999999999999999999886544322
Q ss_pred ---ccccCCCccccccCccCcceec
Q 040586 60 ---THVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 60 ---~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..........|++.|+|||.+.
T Consensus 179 ~~~~~~~~~~~~~gt~~y~aPE~~~ 203 (350)
T cd05573 179 DHKQRRVRANSTVGTPDYIAPEVLR 203 (350)
T ss_pred ccccccccccccccCccccCHHHHc
Confidence 0001122446899999999764
No 117
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.69 E-value=9.5e-17 Score=87.09 Aligned_cols=72 Identities=28% Similarity=0.580 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.|++.|+.|+| +.+++|+|++|.|++++.++.+++.|||++.......... ...|+..|+|||.+.
T Consensus 96 ~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~----~~~~~~~y~aPE~~~ 167 (277)
T cd05607 96 RVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTIT----QRAGTNGYMAPEILK 167 (277)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceee----ccCCCCCccCHHHHc
Confidence 45678899999999999 8999999999999999999999999999987654332211 336788999999764
No 118
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.69 E-value=8e-17 Score=90.69 Aligned_cols=76 Identities=21% Similarity=0.382 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.|+.|+| +++++|+|+++.|++++.+..++++|||++.......... ......++..|+|||.+.
T Consensus 212 ~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 287 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV-VKGNARLPVKWMAPESIF 287 (374)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee-eccCCCCccceeCHHHhc
Confidence 356788999999999999 8999999999999999999999999999986554322111 111223456799999763
No 119
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.69 E-value=4.9e-17 Score=90.97 Aligned_cols=50 Identities=24% Similarity=0.385 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
....++.|++.++.|+| +++++|+|++|+|++++.++.+++.|||++...
T Consensus 102 ~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 102 ATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence 45667899999999999 999999999999999999999999999987643
No 120
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.69 E-value=3e-17 Score=84.54 Aligned_cols=73 Identities=18% Similarity=0.321 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
...++.|++.|+.++| +..++|||++|.|.++..++..|++|||+++.++.+..+.. ..+.|.||++|.++.+
T Consensus 103 ~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvrcys---aevvtlwyrppdvlfg 175 (292)
T KOG0662|consen 103 VRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS---AEVVTLWYRPPDVLFG 175 (292)
T ss_pred HHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee---ceeeeeeccCcceeee
Confidence 4567899999999999 99999999999999999999999999999998877654432 4467999999998753
No 121
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.68 E-value=4.2e-17 Score=89.99 Aligned_cols=74 Identities=28% Similarity=0.435 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 96 ~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~ 169 (318)
T cd05570 96 PRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT---TSTFCGTPDYIAPEILS 169 (318)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc---ccceecCccccCHHHhc
Confidence 356678899999999999 999999999999999999999999999987543221111 11346889999999864
No 122
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.68 E-value=5.7e-17 Score=91.16 Aligned_cols=49 Identities=24% Similarity=0.325 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
....++.|++.||.|+| +.+++|+|++|+|++++.++.+++.|||++..
T Consensus 102 ~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~ 150 (377)
T cd05629 102 VTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTG 150 (377)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccc
Confidence 34567899999999999 99999999999999999999999999998853
No 123
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.68 E-value=6.3e-17 Score=91.18 Aligned_cols=49 Identities=22% Similarity=0.330 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
....++.|++.||.|+| ..+++|+|++|+|++++.++.+++.|||++..
T Consensus 102 ~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 102 LARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 34567889999999999 89999999999999999999999999998753
No 124
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.68 E-value=9.5e-17 Score=89.32 Aligned_cols=76 Identities=24% Similarity=0.420 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.|+| +++++|+|++|.|++++.++.+++.|||++........... .....++..|+|||.+.
T Consensus 173 ~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 248 (337)
T cd05054 173 EDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPESIF 248 (337)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhh-ccCCCCCccccCcHHhc
Confidence 457788999999999999 89999999999999999999999999999876533222111 11334567899999753
No 125
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.68 E-value=6.2e-17 Score=90.97 Aligned_cols=47 Identities=23% Similarity=0.386 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++.|++.||.|+| +++++|+|++++|++++.++.+++.|||++.
T Consensus 103 ~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 103 ARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred HHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 4567889999999999 8999999999999999999999999999874
No 126
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.68 E-value=8.6e-17 Score=97.27 Aligned_cols=77 Identities=17% Similarity=0.099 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-------------------CceEEeecceeeecCCCCc--
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-------------------NVAKFFNFSVSISIPEGKT-- 60 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-------------------~~~~l~~~~~~~~~~~~~~-- 60 (82)
.+.+.++.|++.||.|+| .++++|+|+||+||+++.. ..+|+.|||+++.......
T Consensus 80 ~~~~~i~~qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~ 156 (793)
T PLN00181 80 FECFHVFRQIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERR 156 (793)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccc
Confidence 356788999999999999 9999999999999999653 3455666666543211000
Q ss_pred -----------cccCCCccccccCccCcceec
Q 040586 61 -----------HVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 61 -----------~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.........||++|||||++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 188 (793)
T PLN00181 157 IEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN 188 (793)
T ss_pred hhhhhccccCCCcccccccCCCcceEChhhhc
Confidence 000011235789999999874
No 127
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.68 E-value=8.2e-17 Score=88.42 Aligned_cols=73 Identities=25% Similarity=0.396 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +++++|+|++|.|++++.++.+++.|||++.......... ....+++.|+|||.+.
T Consensus 105 ~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~ 177 (309)
T cd07872 105 NVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY---SNEVVTLWYRPPDVLL 177 (309)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc---ccccccccccCCHHHh
Confidence 45667889999999999 8999999999999999999999999999986543322111 1335688999999763
No 128
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.67 E-value=7.4e-17 Score=98.75 Aligned_cols=73 Identities=29% Similarity=0.414 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+..|+.+++.|+.-+| ..+.||||++|+|++++..|.+|++|||.+-.......-. ....+|||-|++||++.
T Consensus 177 ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~--s~~aVGTPDYISPEvLq 249 (1317)
T KOG0612|consen 177 ARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR--SSVAVGTPDYISPEVLQ 249 (1317)
T ss_pred HHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE--eccccCCCCccCHHHHH
Confidence 4557889999999999 9999999999999999999999999999775554332222 22679999999999885
No 129
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.67 E-value=1.4e-16 Score=92.64 Aligned_cols=71 Identities=27% Similarity=0.364 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc--CCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE--RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.+|.+|| ..++||+|+||+||++.. ...+||.|||.++....... ..+-+.+|+|||+|
T Consensus 290 ~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy------tYiQSRfYRAPEVI 360 (586)
T KOG0667|consen 290 LVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY------TYIQSRFYRAPEVI 360 (586)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccccCCcce------eeeeccccccchhh
Confidence 45678899999999999 999999999999999964 34789999999876654433 23447899999998
Q ss_pred cC
Q 040586 81 TT 82 (82)
Q Consensus 81 ~~ 82 (82)
.+
T Consensus 361 LG 362 (586)
T KOG0667|consen 361 LG 362 (586)
T ss_pred cc
Confidence 54
No 130
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.67 E-value=2e-16 Score=89.77 Aligned_cols=73 Identities=27% Similarity=0.395 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.+|+.||-+|| ++++|.||++.+|++++..+.+|+.|||++..--.. ......++|||.|+|||++.
T Consensus 451 ~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~---~~TTkTFCGTPdYiAPEIi~ 523 (683)
T KOG0696|consen 451 VAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD---GVTTKTFCGTPDYIAPEIIA 523 (683)
T ss_pred hhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccccC---CcceeeecCCCcccccceEE
Confidence 45678999999999999 999999999999999999999999999998532111 11233779999999999874
No 131
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.67 E-value=7.8e-17 Score=93.51 Aligned_cols=69 Identities=29% Similarity=0.494 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC---ceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN---VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..||+.++.||| -++++|+|+||+|+++.+.. .+|++|||.+++.++..-. +..+||+-|+|||+++
T Consensus 668 FlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR----rsVVGTPAYLaPEVLr 739 (888)
T KOG4236|consen 668 FLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR----RSVVGTPAYLAPEVLR 739 (888)
T ss_pred HHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh----hhhcCCccccCHHHHh
Confidence 35689999999999 99999999999999997654 5799999999887654322 2679999999999875
No 132
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.66 E-value=1.1e-16 Score=86.38 Aligned_cols=74 Identities=16% Similarity=0.241 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
..+.++.|++.|+.|+| +++++|+|++|.|++++.++.+++.|||++........... .....+++.|+|||.+
T Consensus 101 ~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~ 174 (269)
T cd05042 101 VLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT-KDCHAVPLRWLAPELV 174 (269)
T ss_pred HHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec-cCCCCCcccccCHHHH
Confidence 45678899999999999 89999999999999999999999999998754332211111 1133456779999975
No 133
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.66 E-value=1.8e-16 Score=89.51 Aligned_cols=72 Identities=32% Similarity=0.576 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC----CceEEeecceeeecCCCCccccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER----NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 78 (82)
+...++.|++.++.|+| ..+++|+|++|+|+++... ..+++.|||++........ ....+||+.|+|||
T Consensus 136 da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~----~~~~~Gtp~y~APE 208 (382)
T KOG0032|consen 136 DAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGER----LHTIVGTPEYVAPE 208 (382)
T ss_pred HHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCce----EeeecCCccccCch
Confidence 45678899999999999 8999999999999999754 3699999999987765222 22568999999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 209 vl~ 211 (382)
T KOG0032|consen 209 VLG 211 (382)
T ss_pred hhc
Confidence 875
No 134
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.66 E-value=1.8e-16 Score=87.31 Aligned_cols=75 Identities=19% Similarity=0.305 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.|++.||.|+| +.+++|+|+++.|++++.+..++++|||++............ ....++..|++||.+.
T Consensus 110 ~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~-~~~~~~~~y~apE~~~ 184 (316)
T cd05108 110 YLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHA-EGGKVPIKWMALESIL 184 (316)
T ss_pred HHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCCCcceec-cCCccceeecChHHhc
Confidence 45778899999999999 899999999999999999999999999999765433222111 1123356799999764
No 135
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.66 E-value=2.4e-16 Score=85.79 Aligned_cols=73 Identities=30% Similarity=0.606 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.|++.++.|+| +.+++|+|+++.|++++.+..+++.|||++........ .....|+..|+|||.+.
T Consensus 102 ~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~----~~~~~g~~~~~aPE~~~ 174 (285)
T cd05632 102 ERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES----IRGRVGTVGYMAPEVLN 174 (285)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc----ccCCCCCcCccChHHhc
Confidence 356778899999999999 89999999999999999999999999998865432211 11346789999999864
No 136
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=1.2e-16 Score=88.31 Aligned_cols=70 Identities=33% Similarity=0.503 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+-.+|++++.||| +++++.||++.+|.+++.++.+|+.|||+++..- ......+.++|||-|+|||++.
T Consensus 272 FYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I---~~g~t~kTFCGTPEYLAPEVle 341 (516)
T KOG0690|consen 272 FYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI---KYGDTTKTFCGTPEYLAPEVLE 341 (516)
T ss_pred hhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc---cccceeccccCChhhcCchhhc
Confidence 45688999999999 8999999999999999999999999999985321 2223344789999999999875
No 137
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.66 E-value=1.5e-16 Score=95.03 Aligned_cols=75 Identities=35% Similarity=0.469 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-----CceEEeecceeeecCCCCccccCCCccccccCccCcc
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-----NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 78 (82)
.+....|+++|+.+|| +.+++|||++|.||+++.. ..++++|||+++.+........+.....||.+|+|||
T Consensus 608 ~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE 684 (903)
T KOG1027|consen 608 PISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPE 684 (903)
T ss_pred HHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHH
Confidence 3567899999999999 8999999999999999862 4678999999998877666666566778999999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
++.
T Consensus 685 ~L~ 687 (903)
T KOG1027|consen 685 QLR 687 (903)
T ss_pred HHh
Confidence 875
No 138
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.66 E-value=3.4e-16 Score=84.98 Aligned_cols=76 Identities=16% Similarity=0.291 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+.++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++.......... ......++..|++||.+.
T Consensus 109 ~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~ 184 (279)
T cd05111 109 QRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY-FYSEHKTPIKWMALESIL 184 (279)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc-ccCCCCCcccccCHHHhc
Confidence 356788999999999999 8899999999999999999999999999987654322111 111334567899999763
No 139
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.66 E-value=2.8e-16 Score=88.49 Aligned_cols=76 Identities=18% Similarity=0.379 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+.++.|++.|+.|+| +++++|+|++|.|++++.+..++++|||++........... .....++..|+|||.+.
T Consensus 214 ~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 289 (375)
T cd05104 214 EDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV-KGNARLPVKWMAPESIF 289 (375)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc-cCCCCCCcceeChhHhc
Confidence 356788999999999999 89999999999999999999999999999876543221111 11223456799999764
No 140
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.66 E-value=2.6e-16 Score=85.50 Aligned_cols=77 Identities=30% Similarity=0.475 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +++++|+|++|.|++++.++.+++.|||++.................++..|+|||.+.
T Consensus 109 ~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~ 185 (284)
T cd05079 109 KQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLI 185 (284)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhc
Confidence 456788999999999999 99999999999999999999999999998876543322111112345667899999753
No 141
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.66 E-value=2.4e-16 Score=85.80 Aligned_cols=72 Identities=32% Similarity=0.619 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++......... ....|++.|+|||.+.
T Consensus 103 ~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~ 174 (285)
T cd05605 103 RAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI----RGRVGTVGYMAPEVVK 174 (285)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc----ccccCCCCccCcHHhc
Confidence 46678899999999999 899999999999999999999999999988654322211 1346789999999864
No 142
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=1.2e-16 Score=84.60 Aligned_cols=70 Identities=33% Similarity=0.563 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+..|++.|+.|+| .+++||||++|+|++++..+..|++|||.+...+ .+.....+||.-|.+||...
T Consensus 126 ~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----~~kR~tlcgt~dyl~pEmv~ 195 (281)
T KOG0580|consen 126 AATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----SNKRKTLCGTLDYLPPEMVE 195 (281)
T ss_pred hhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----CCCceeeecccccCCHhhcC
Confidence 3467899999999999 9999999999999999999999999999875433 12233779999999999765
No 143
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.65 E-value=1.4e-16 Score=91.45 Aligned_cols=47 Identities=28% Similarity=0.379 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++.+++.|+.-+| +.++||||+||+|+|+|..+.+|++|||++.
T Consensus 243 arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 243 ARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLST 289 (550)
T ss_pred HHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccc
Confidence 4567899999999999 9999999999999999999999999999985
No 144
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.65 E-value=3.5e-16 Score=84.92 Aligned_cols=77 Identities=25% Similarity=0.432 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +++++|+|++|.|++++.+..+++.|||++.................++..|++||.+.
T Consensus 107 ~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~ 183 (283)
T cd05080 107 AQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLK 183 (283)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhc
Confidence 467788999999999999 89999999999999999999999999999865543222111111223456799999764
No 145
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.65 E-value=4.8e-16 Score=85.21 Aligned_cols=75 Identities=21% Similarity=0.335 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++........... .....+++.|+|||.+.
T Consensus 138 ~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 212 (304)
T cd05101 138 DLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKK-TTNGRLPVKWMAPEALF 212 (304)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeecccccceEEEcCCCcEEECCCccceeccccccccc-ccCCCCCceeeCchhhc
Confidence 46778899999999999 89999999999999999999999999999876543222211 11223457799999763
No 146
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.65 E-value=1.8e-16 Score=91.93 Aligned_cols=72 Identities=29% Similarity=0.386 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
...+..|+.++++||| ++.++|+|++.+|++++.+.++|++|||++.++....... ..+|++.|.|||+..+
T Consensus 157 ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lq----t~cgsppyAaPEl~~g 228 (596)
T KOG0586|consen 157 ARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQ----TFCGSPPYAAPELFNG 228 (596)
T ss_pred hhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeeccccccc----ccCCCCCccChHhhcC
Confidence 4456789999999999 9999999999999999999999999999998876444333 5689999999998753
No 147
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.65 E-value=3.1e-16 Score=95.52 Aligned_cols=76 Identities=22% Similarity=0.423 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCc---------------cccCCCc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKT---------------HVNDTDK 67 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~---------------~~~~~~~ 67 (82)
+.+.++.|++.|+.|+| +++++|+|++|+||+++.++.+++.|||++........ .......
T Consensus 114 ~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~ 190 (932)
T PRK13184 114 AFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGK 190 (932)
T ss_pred HHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCC
Confidence 45678899999999999 89999999999999999999999999999876521100 0011123
Q ss_pred cccccCccCcceec
Q 040586 68 LIGTLGFIAPECMT 81 (82)
Q Consensus 68 ~~~~~~~~~pe~~~ 81 (82)
..||+.|+|||.+.
T Consensus 191 ~vGT~~YmAPE~l~ 204 (932)
T PRK13184 191 IVGTPDYMAPERLL 204 (932)
T ss_pred CCCCCCCCCHHHhc
Confidence 46899999999764
No 148
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.65 E-value=3.2e-16 Score=86.99 Aligned_cols=75 Identities=27% Similarity=0.396 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.|+.++| +.+++|+|+++.|++++.++.+++.|||++.................|++.|+|||.+
T Consensus 107 ~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 181 (336)
T cd07849 107 HIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM 181 (336)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHh
Confidence 45667899999999999 8999999999999999999999999999987654322221111234678899999975
No 149
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.65 E-value=5e-16 Score=84.20 Aligned_cols=76 Identities=21% Similarity=0.325 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.|+.|+| +++++|+|++|+|++++.++.+++.|||++........... .....+++.|++||.+.
T Consensus 109 ~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~ 184 (279)
T cd05109 109 QDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH-ADGGKVPIKWMALESIL 184 (279)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecccccceee-cCCCccchhhCCHHHhc
Confidence 356788999999999999 89999999999999999999999999999876543222111 11123456799999763
No 150
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.65 E-value=2.6e-16 Score=85.93 Aligned_cols=72 Identities=29% Similarity=0.399 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEc---cCCceEEeecceeeecCCCCccccCCCccccccCccCcce
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQ---ERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 79 (82)
++-.++.||..++.||| +.++-|||++++|++.. .+..+|+.|||+++.-....... ..+-|++|.|||+
T Consensus 162 ea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~----TPc~TPyYvaPev 234 (400)
T KOG0604|consen 162 EASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM----TPCFTPYYVAPEV 234 (400)
T ss_pred HHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccccccCCCcccc----CCcccccccCHHH
Confidence 45678899999999999 99999999999999996 45678999999997644322221 4466999999997
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 235 lg 236 (400)
T KOG0604|consen 235 LG 236 (400)
T ss_pred hC
Confidence 63
No 151
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.65 E-value=2.1e-16 Score=97.79 Aligned_cols=73 Identities=30% Similarity=0.552 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCC-ccccCCCccccccCccCcceecC
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGK-THVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+..|++.|+.||| ..+++|||+++.||+++.++.+|..|||.+....... .-........||+-|||||.+.+
T Consensus 1339 yt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~ 1412 (1509)
T KOG4645|consen 1339 YTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITG 1412 (1509)
T ss_pred HHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcc
Confidence 4588999999999 9999999999999999999999999999987654332 22223336689999999999863
No 152
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.64 E-value=4.7e-16 Score=83.60 Aligned_cols=77 Identities=19% Similarity=0.381 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +++++|+|+++.|++++.+..+++.|||++.................++..|+|||.+.
T Consensus 95 ~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 171 (257)
T cd05115 95 SNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECIN 171 (257)
T ss_pred HHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHc
Confidence 356788999999999999 89999999999999999999999999998865443322111111112356799999753
No 153
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.64 E-value=9.5e-16 Score=82.30 Aligned_cols=76 Identities=28% Similarity=0.352 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.................++..|+|||.+.
T Consensus 105 ~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 180 (263)
T cd06625 105 VTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS 180 (263)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceec
Confidence 35677899999999999 99999999999999999999999999999865433221111112345678999999875
No 154
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.64 E-value=5.3e-16 Score=84.15 Aligned_cols=73 Identities=25% Similarity=0.372 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.||.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 102 ~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 174 (285)
T cd07861 102 LVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV---YTHEVVTLWYRAPEVLL 174 (285)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc---ccCCcccccccChHHhc
Confidence 45678999999999999 899999999999999999999999999998654332211 11335678999999753
No 155
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.64 E-value=3.2e-16 Score=85.00 Aligned_cols=73 Identities=19% Similarity=0.320 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| ..+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 100 ~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 172 (284)
T cd07839 100 IVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC---YSAEVVTLWYRPPDVLF 172 (284)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC---cCCCccccCCcChHHHh
Confidence 56788999999999999 899999999999999999999999999988654332211 11335678999999763
No 156
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.64 E-value=6.2e-16 Score=84.27 Aligned_cols=72 Identities=31% Similarity=0.630 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++......... ....|++.|+|||.+.
T Consensus 103 ~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~----~~~~g~~~y~aPE~~~ 174 (285)
T cd05630 103 RAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI----KGRVGTVGYMAPEVVK 174 (285)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccc----cCCCCCccccChHHHc
Confidence 46678899999999999 899999999999999999999999999988654322211 1346789999999864
No 157
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.64 E-value=9.9e-16 Score=82.01 Aligned_cols=74 Identities=24% Similarity=0.444 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.+++.++.++| +++++|+|++++|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 102 ~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 175 (257)
T cd08223 102 NQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM---ASTLIGTPYYMSPELFS 175 (257)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCCc---cccccCCcCccChhHhc
Confidence 356788999999999999 899999999999999999999999999998765432221 12346788999999764
No 158
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.64 E-value=8.5e-16 Score=83.40 Aligned_cols=73 Identities=30% Similarity=0.446 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
..+..++.|++.++.|+| +.+++|+|+++.|++++.++.++++|||++......... .....+++.|+|||.+
T Consensus 103 ~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~ 175 (282)
T cd06643 103 PQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR---RDSFIGTPYWMAPEVV 175 (282)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccccc---cccccccccccCHhhc
Confidence 356778899999999999 899999999999999999999999999988654322211 1134678899999986
No 159
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.64 E-value=7.3e-16 Score=82.72 Aligned_cols=77 Identities=21% Similarity=0.365 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+.++.|++.++.++| +++++|+|++|.|++++.+..+++.|||++.................++..|+|||.+.
T Consensus 95 ~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 171 (257)
T cd05116 95 KNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMN 171 (257)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhc
Confidence 356788999999999999 89999999999999999999999999999866543322111111223356899999753
No 160
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.64 E-value=7.9e-16 Score=83.45 Aligned_cols=75 Identities=25% Similarity=0.345 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.++.|+| ..+++|+|++|+|++++.++.+++.|||++.......... ......+++.|+|||.+.
T Consensus 125 ~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 199 (283)
T cd05048 125 DFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYR-VQSKSLLPVRWMPPEAIL 199 (283)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCCcEEECCCcceeecccccccc-ccCCCcccccccCHHHhc
Confidence 45678999999999999 8999999999999999999999999999986543222111 111334578899999763
No 161
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.64 E-value=3.1e-16 Score=85.09 Aligned_cols=75 Identities=13% Similarity=0.251 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.|++.|+.|+| +.+++|+|++|.|++++.+..+++.|||++.......... ......+++.|+|||.+.
T Consensus 125 ~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 199 (283)
T cd05091 125 DFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK-LMGNSLLPIRWMSPEAIM 199 (283)
T ss_pred HHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCceEecccccccccccchhee-eccCccCCccccCHHHHh
Confidence 35678899999999999 8999999999999999999999999999876543222111 111334567899999763
No 162
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.63 E-value=4.1e-16 Score=84.47 Aligned_cols=75 Identities=24% Similarity=0.354 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.++.|+| +.+++|+|++|.|++++.++.+++.|||++........... .....+++.|+|||.+.
T Consensus 120 ~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 194 (277)
T cd05062 120 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLK 194 (277)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeec-CCCCccCHhhcChhHhh
Confidence 45678899999999999 88999999999999999999999999998865433222111 11234467899999764
No 163
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.63 E-value=1.5e-16 Score=91.24 Aligned_cols=74 Identities=23% Similarity=0.374 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.+++.||.||| ++++||||+.+.|+|++.+..+|++|||++..-..-..... ...-+..|+|||.+.
T Consensus 262 ~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~---~~klPirWLAPEtl~ 335 (474)
T KOG0194|consen 262 LEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF---LKKLPIRWLAPETLN 335 (474)
T ss_pred HHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccc---cccCcceecChhhhc
Confidence 468899999999999999 99999999999999999999999999999754321111110 112367899999875
No 164
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.63 E-value=8.7e-16 Score=83.76 Aligned_cols=76 Identities=21% Similarity=0.316 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +++++|+|++|.|++++.++.+++.|||++......... .......++..|+|||.+.
T Consensus 123 ~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~ 198 (291)
T cd05094 123 SQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIM 198 (291)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEECCCCcccccCCCcee-ecCCCCCcceeecChHHhc
Confidence 356788999999999999 999999999999999999999999999988654332211 1111335577899999764
No 165
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=2.2e-16 Score=94.02 Aligned_cols=76 Identities=25% Similarity=0.342 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|||.||.||- .+.++|||+.+.|+++..+..+|++|||+++..-+..+..-.. ...-+++|||||.|.
T Consensus 603 ~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~-~t~lPIRWMppEsIl 678 (774)
T KOG1026|consen 603 SQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRG-NTLLPIRWMPPESIL 678 (774)
T ss_pred HHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccC-CceeeeecCCHHHhh
Confidence 367899999999999999 8999999999999999999999999999998766655543322 223478999999874
No 166
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.63 E-value=6.5e-16 Score=82.76 Aligned_cols=77 Identities=23% Similarity=0.429 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.|++.++.++| +++++|+|+++.|++++.++.+++.|||++.................++..|++||.+.
T Consensus 97 ~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~ 173 (257)
T cd05040 97 STLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLR 173 (257)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhc
Confidence 356778899999999999 89999999999999999999999999999876543222111111334577899999753
No 167
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.63 E-value=6.9e-16 Score=83.17 Aligned_cols=76 Identities=26% Similarity=0.336 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.................++..|+|||.+.
T Consensus 107 ~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 182 (266)
T cd06651 107 VTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182 (266)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhC
Confidence 45678899999999999 89999999999999999999999999998865432211111112345788999999764
No 168
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.63 E-value=6.1e-16 Score=84.90 Aligned_cols=75 Identities=28% Similarity=0.406 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc----CCceEEeecceeeecCCCCccccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE----RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 78 (82)
....++.|++.++.|+| +.+++|+|+++.|++++. .+.+++.|||++.................+++.|+|||
T Consensus 109 ~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 185 (316)
T cd07842 109 MVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPE 185 (316)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHH
Confidence 35578899999999999 899999999999999999 89999999998876543322111122346788999999
Q ss_pred ee
Q 040586 79 CM 80 (82)
Q Consensus 79 ~~ 80 (82)
.+
T Consensus 186 ~~ 187 (316)
T cd07842 186 LL 187 (316)
T ss_pred HH
Confidence 65
No 169
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.63 E-value=7e-16 Score=83.73 Aligned_cols=77 Identities=25% Similarity=0.373 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.|+| .++++|+|+++.|++++.++.+++.|||++.................++..|+|||.+.
T Consensus 108 ~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 184 (284)
T cd05081 108 RKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLT 184 (284)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhc
Confidence 456778899999999999 89999999999999999999999999999876543222111111122345689999764
No 170
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.63 E-value=6.3e-16 Score=83.93 Aligned_cols=72 Identities=26% Similarity=0.500 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++........ ....|+..|+|||.+.
T Consensus 97 ~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~ 168 (278)
T cd05606 97 AEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-----HASVGTHGYMAPEVLQ 168 (278)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-----cCcCCCcCCcCcHHhc
Confidence 456788999999999999 89999999999999999999999999998864432211 1346789999999864
No 171
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.62 E-value=1.2e-15 Score=82.28 Aligned_cols=70 Identities=23% Similarity=0.515 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCc-------eEEeecceeeecCCCCccccCCCccccccCc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNV-------AKFFNFSVSISIPEGKTHVNDTDKLIGTLGF 74 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (82)
..++.++.|++.|+.|+| +++++|+|++|.|++++..+. +++.|||++....... ...++..|
T Consensus 105 ~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~-------~~~~~~~y 174 (262)
T cd05077 105 PWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ-------ECVERIPW 174 (262)
T ss_pred HHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc-------cccccccc
Confidence 356788999999999999 899999999999999986553 7899999875432211 23567889
Q ss_pred cCcceec
Q 040586 75 IAPECMT 81 (82)
Q Consensus 75 ~~pe~~~ 81 (82)
+|||.+.
T Consensus 175 ~aPE~~~ 181 (262)
T cd05077 175 IAPECVE 181 (262)
T ss_pred cChhhhc
Confidence 9999763
No 172
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.62 E-value=5.3e-16 Score=84.30 Aligned_cols=71 Identities=28% Similarity=0.525 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.|+.|+| +.+++|+|++++|++++.++.+++.|||++........ ....|++.|+|||.+
T Consensus 97 ~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~ 167 (279)
T cd05633 97 KEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL 167 (279)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-----cCcCCCcCccCHHHh
Confidence 356778899999999999 89999999999999999999999999998865432221 133678999999975
No 173
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.62 E-value=9.2e-16 Score=82.60 Aligned_cols=76 Identities=28% Similarity=0.338 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.................++..|+|||.+.
T Consensus 107 ~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 182 (265)
T cd06652 107 VTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS 182 (265)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhc
Confidence 45678899999999999 89999999999999999999999999998865432211111122345788999999764
No 174
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.62 E-value=1.2e-15 Score=86.66 Aligned_cols=75 Identities=20% Similarity=0.386 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.|+.|+| ..+++|+|+++.|++++.+..+++.|||++.......... ......+++.|+|||.+.
T Consensus 238 ~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 312 (400)
T cd05105 238 DLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYV-SKGSTFLPVKWMAPESIF 312 (400)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccccc-ccCCcCCCcceEChhhhc
Confidence 46778999999999999 8999999999999999999999999999987654322111 111334677899999764
No 175
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.62 E-value=1e-15 Score=82.09 Aligned_cols=71 Identities=25% Similarity=0.420 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..++.++.|++.++.++| +++++|+|++|.|++++.++.+++.|||++........ ...++..|+|||.+.
T Consensus 102 ~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~y~aPE~~~ 172 (256)
T cd05082 102 DCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD------TGKLPVKWTAPEALR 172 (256)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCC------CCccceeecCHHHHc
Confidence 356788999999999999 89999999999999999999999999998865432221 223356799999753
No 176
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1.8e-16 Score=96.78 Aligned_cols=76 Identities=24% Similarity=0.439 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++++++.+||.|+.||+ ++.++|||+.+.|++++....+|++|||+++......+..... ...-+.+|||||.+.
T Consensus 802 ~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~-~a~lPvkWm~PEsl~ 877 (1025)
T KOG1095|consen 802 RDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHG-EAMLPVKWMPPESLK 877 (1025)
T ss_pred HHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccC-ccccceecCCHHHHh
Confidence 578899999999999999 9999999999999999999999999999998443333332221 223367899999875
No 177
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.62 E-value=1.4e-15 Score=81.85 Aligned_cols=74 Identities=22% Similarity=0.340 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.|++.++.++| +++++|+|++|.|++++.++.+++.|||++........... ....++..|+|||.+.
T Consensus 105 ~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~ 178 (263)
T cd05052 105 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH--AGAKFPIKWTAPESLA 178 (263)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc--CCCCCccccCCHHHhc
Confidence 45678899999999999 89999999999999999999999999999866543222111 1223356799999753
No 178
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.62 E-value=2.6e-15 Score=90.26 Aligned_cols=70 Identities=30% Similarity=0.486 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
-++.+++.|+.+|| .+.++|+|++-.||++..++.+|+.|||++..+...... ..+.+||++|||||++.
T Consensus 127 YI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~gr---RnT~iGtP~WMAPEVia 196 (953)
T KOG0587|consen 127 YILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGR---RNTFIGTPYWMAPEVIA 196 (953)
T ss_pred HHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeeccccc---ccCcCCCcccccceeee
Confidence 35688899999999 999999999999999999999999999998776554433 22678999999999875
No 179
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.62 E-value=1.3e-15 Score=81.77 Aligned_cols=75 Identities=19% Similarity=0.390 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.++.|+| +.+++|+|++|.|++++.++.+++.|||++........... ....++..|+|||.+.
T Consensus 103 ~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~ 177 (261)
T cd05072 103 PKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR--EGAKFPIKWTAPEAIN 177 (261)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc--CCCccceecCCHHHhc
Confidence 346778899999999999 89999999999999999999999999999876543222111 1223467899999753
No 180
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.62 E-value=1.7e-15 Score=84.39 Aligned_cols=75 Identities=24% Similarity=0.419 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+++.++.|++.|+.|+| +++++|+|++|.|++++.++.+++.|||++.......... ......+++.|+|||.+
T Consensus 179 ~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~ 253 (343)
T cd05103 179 EDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETI 253 (343)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchh-hcCCCCCCcceECcHHh
Confidence 356778999999999999 8999999999999999999999999999886543221111 11122345679999975
No 181
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.62 E-value=1.6e-15 Score=82.61 Aligned_cols=73 Identities=21% Similarity=0.337 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 104 ~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 176 (291)
T cd07870 104 NVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT---YSSEVVTLWYRPPDVLL 176 (291)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC---CCCccccccccCCceee
Confidence 45667899999999999 889999999999999999999999999988643322111 11335688999999763
No 182
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.62 E-value=6.7e-16 Score=83.27 Aligned_cols=73 Identities=27% Similarity=0.447 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 112 ~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~ 184 (272)
T cd06637 112 WIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIA 184 (272)
T ss_pred HHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceeccccccc---CCcccccccccCHhHhc
Confidence 45668899999999999 889999999999999999999999999998654322211 12446788999999763
No 183
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=9.7e-16 Score=88.80 Aligned_cols=74 Identities=24% Similarity=0.423 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..++.|++.++.++| ..+++|.|++|.|+++-+ +.+|+.|||.+..........-.. ..+||+.||+||.+.
T Consensus 461 ~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kd-sQvGT~NYMsPEAl~ 534 (677)
T KOG0596|consen 461 FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKD-SQVGTVNYMSPEALT 534 (677)
T ss_pred HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCccccceeec-cccCcccccCHHHHh
Confidence 35678899999999999 999999999999999876 568999999998877655543322 558999999999875
No 184
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.61 E-value=1.9e-15 Score=83.59 Aligned_cols=76 Identities=24% Similarity=0.360 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+.................++..|+|||.+.
T Consensus 104 ~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 179 (330)
T cd07834 104 HIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLL 179 (330)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeee
Confidence 45678899999999999 89999999999999999999999999999876554331111122346788999999864
No 185
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.61 E-value=2e-15 Score=83.80 Aligned_cols=71 Identities=30% Similarity=0.555 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCC-CeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSR-PIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| .. +++|+|+++.|++++.++.+++.|||++....... .....|++.|+|||.+.
T Consensus 104 ~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~g~~~y~aPE~~~ 175 (331)
T cd06649 104 ILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQ 175 (331)
T ss_pred HHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc-----cccCCCCcCcCCHhHhc
Confidence 34677899999999999 64 69999999999999999999999999886543221 11346889999999864
No 186
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.61 E-value=1.5e-15 Score=81.61 Aligned_cols=76 Identities=18% Similarity=0.319 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc-ccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH-VNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.|++.|+.|+| ..+++|+|+++.|++++.++.+++.|||++......... ........++..|+|||.+.
T Consensus 99 ~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 175 (262)
T cd05058 99 DLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQ 175 (262)
T ss_pred HHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhc
Confidence 45678889999999999 899999999999999999999999999988654332111 11111234567899999753
No 187
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.61 E-value=1.6e-15 Score=82.65 Aligned_cols=75 Identities=23% Similarity=0.332 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.++.|+| +++++|+|++|.|++++.++.+++.|||.+......... .......++..|+|||.+.
T Consensus 121 ~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~ 195 (288)
T cd05093 121 QMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIM 195 (288)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEeccCCccccccCCcee-ecCCCCCccccccCHHHhc
Confidence 56778999999999999 899999999999999999999999999988654322111 1111234567899999764
No 188
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.61 E-value=7.4e-16 Score=84.24 Aligned_cols=74 Identities=24% Similarity=0.504 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||++......... .....|+..|+|||.+.
T Consensus 118 ~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 191 (292)
T cd06658 118 EQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKSLVGTPYWMAPEVIS 191 (292)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc---CceeecCccccCHHHHc
Confidence 356788999999999999 899999999999999999999999999987544322111 12346788999999753
No 189
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.61 E-value=3.6e-15 Score=80.18 Aligned_cols=75 Identities=23% Similarity=0.385 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.+++.++.++| +++++|+|+++.|++++.++.+++.|||++............ ....+..|+|||.+.
T Consensus 103 ~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~y~aPE~~~ 177 (261)
T cd05068 103 PQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE--GAKFPIKWTAPEAAL 177 (261)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC--CCcCceeccCccccc
Confidence 456788999999999999 899999999999999999999999999998766532221110 112245799999754
No 190
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.61 E-value=1.4e-15 Score=82.90 Aligned_cols=75 Identities=21% Similarity=0.322 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.|++.++.|+| .++++|+|+++.|++++.++.+++.|||++........... .....++..|+|||.+.
T Consensus 133 ~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 207 (293)
T cd05053 133 DLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRK-TTNGRLPVKWMAPEALF 207 (293)
T ss_pred HHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcCCCeEEeCccccccccccccceec-cCCCCCCccccCHHHhc
Confidence 45778999999999999 89999999999999999999999999998875543222111 11223456799999753
No 191
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.61 E-value=6.3e-17 Score=88.79 Aligned_cols=70 Identities=29% Similarity=0.484 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++...+.|++||| ...-||||+++.||++...+..|++|||++..+.+.....+ ...||++|||||++.
T Consensus 133 ~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN---TVIGTPFWMAPEVI~ 202 (502)
T KOG0574|consen 133 AVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN---TVIGTPFWMAPEVIE 202 (502)
T ss_pred HHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC---ccccCcccccHHHHH
Confidence 34567789999999 88899999999999999999999999999987765544322 678999999999864
No 192
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.61 E-value=1e-15 Score=84.91 Aligned_cols=75 Identities=25% Similarity=0.385 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccc-cCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHV-NDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.|+.|+| ..+++|+|++|.|++++.++.+++.|||++.......... .......|+..|+|||.+
T Consensus 106 ~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 181 (332)
T cd07857 106 HFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIM 181 (332)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHH
Confidence 46678899999999999 8999999999999999999999999999987654322111 111234678899999965
No 193
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.61 E-value=2e-15 Score=80.98 Aligned_cols=77 Identities=29% Similarity=0.433 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+..++.|++.++.++| ..+++|+|++++|++++.++.+++.|||.+.................++..|+|||.+.
T Consensus 95 ~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 171 (257)
T cd05060 95 SDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECIN 171 (257)
T ss_pred HHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhc
Confidence 456788999999999999 89999999999999999999999999999876543322211111122346799999753
No 194
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.61 E-value=1.5e-15 Score=82.83 Aligned_cols=74 Identities=27% Similarity=0.376 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 106 ~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~aPE~~~ 179 (293)
T cd07843 106 SEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP---YTQLVVTLWYRAPELLL 179 (293)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccc---cccccccccccCchhhc
Confidence 356788999999999999 899999999999999999999999999988765543211 11335678899999763
No 195
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.61 E-value=1.9e-15 Score=80.86 Aligned_cols=73 Identities=23% Similarity=0.401 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.+++.++.|+| +.+++|+|+++.|++++.++.+++.|||++.......... ....|++.|+|||.+.
T Consensus 102 ~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~ 174 (256)
T cd08529 102 QVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA---NTIVGTPYYLSPELCE 174 (256)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchh---hccccCccccCHHHhc
Confidence 45678899999999999 8999999999999999999999999999887654432221 1346788999999764
No 196
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.61 E-value=2e-15 Score=82.41 Aligned_cols=73 Identities=26% Similarity=0.370 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
..++.++.|++.+|.|+| +++++|+|+++.|++++.++.+++.|||++.......... ....+++.|+|||.+
T Consensus 102 ~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~ 174 (298)
T cd07841 102 ADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM---THQVVTRWYRAPELL 174 (298)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc---cccccceeeeCHHHH
Confidence 356788999999999999 8999999999999999999999999999987654432211 123457789999975
No 197
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.61 E-value=2e-15 Score=80.88 Aligned_cols=70 Identities=23% Similarity=0.466 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-------ceEEeecceeeecCCCCccccCCCccccccCc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-------VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGF 74 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (82)
..++.++.|++.|+.|+| +++++|+|++|.|++++..+ .+++.|||++....... ...++..|
T Consensus 101 ~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~y 170 (259)
T cd05037 101 HWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE-------ERVERIPW 170 (259)
T ss_pred HHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCccccccccc-------ccccCCCc
Confidence 356778899999999999 89999999999999999877 78999999886543211 23456779
Q ss_pred cCcceec
Q 040586 75 IAPECMT 81 (82)
Q Consensus 75 ~~pe~~~ 81 (82)
+|||.+.
T Consensus 171 ~aPE~~~ 177 (259)
T cd05037 171 IAPECIR 177 (259)
T ss_pred cChhhhc
Confidence 9999864
No 198
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.61 E-value=1.2e-15 Score=82.13 Aligned_cols=76 Identities=28% Similarity=0.350 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.................++..|+|||.+.
T Consensus 107 ~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 182 (264)
T cd06653 107 VTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVIS 182 (264)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhc
Confidence 45678899999999999 89999999999999999999999999998865432111111112345788999999764
No 199
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.61 E-value=1.9e-15 Score=80.79 Aligned_cols=76 Identities=26% Similarity=0.373 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.++| +++++|+|+++.|++++.++.+++.|||.+......... .......+++.|+|||.+.
T Consensus 105 ~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~ 180 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYY-RKKTGGKLPIRWMAPESLK 180 (262)
T ss_pred HHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccccccc-ccccCCCcCccccCHHHhc
Confidence 356788999999999999 899999999999999999999999999988665433211 1112345678899999764
No 200
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.61 E-value=2.2e-15 Score=81.18 Aligned_cols=74 Identities=23% Similarity=0.358 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+++.++.|++.++.++| +.+++|+|++|.|++++.++.+++.|||.+........... ....++..|++||.+
T Consensus 102 ~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~--~~~~~~~~y~~PE~~ 175 (262)
T cd05071 102 PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR--QGAKFPIKWTAPEAA 175 (262)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccccc--cCCcccceecCHhHh
Confidence 456788899999999999 89999999999999999999999999998865543322111 123456779999975
No 201
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.61 E-value=2.6e-15 Score=81.50 Aligned_cols=71 Identities=30% Similarity=0.539 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++....... .....++..|+|||.+.
T Consensus 96 ~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~ 166 (279)
T cd06619 96 VLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-----AKTYVGTNAYMAPERIS 166 (279)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-----ccCCCCChhhcCceeec
Confidence 34568899999999999 9999999999999999999999999999886543221 11346788999999864
No 202
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.61 E-value=1.9e-15 Score=81.43 Aligned_cols=72 Identities=31% Similarity=0.446 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||++......... .....|+..|+|||.+
T Consensus 107 ~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~ 178 (267)
T cd06645 107 QIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK---RKSFIGTPYWMAPEVA 178 (267)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc---cccccCcccccChhhh
Confidence 45678899999999999 899999999999999999999999999998655432211 1234678999999975
No 203
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.61 E-value=2.4e-15 Score=84.57 Aligned_cols=74 Identities=20% Similarity=0.242 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecC-CCCCEEEccCCceEEeecceeeecCCCCcccc-----CCCccccccCccCcc
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDI-KPSTLLFQERNVAKFFNFSVSISIPEGKTHVN-----DTDKLIGTLGFIAPE 78 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l-~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pe 78 (82)
..++.+++.++.++| +.+++|+|+ +|.|++++.++.+++.|||++..+........ ......+++.|++||
T Consensus 114 ~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe 190 (365)
T PRK09188 114 PAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPD 190 (365)
T ss_pred HHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcc
Confidence 467889999999999 899999999 99999999888999999999987654322111 112456788899999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 191 ~~~ 193 (365)
T PRK09188 191 ALT 193 (365)
T ss_pred cCC
Confidence 864
No 204
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.61 E-value=1.7e-15 Score=82.22 Aligned_cols=75 Identities=23% Similarity=0.332 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.++.|+| .++++|+|++|.|++++.+..+++.|||++........... .....++..|+|||.+.
T Consensus 125 ~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 199 (283)
T cd05090 125 DFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRV-QPKSLLPIRWMPPEAIM 199 (283)
T ss_pred HHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCCcEEeccccccccccCCcceec-ccCCCccceecChHHhc
Confidence 45678899999999999 89999999999999999999999999999866543222111 11234467799999763
No 205
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.61 E-value=1.7e-15 Score=83.48 Aligned_cols=75 Identities=24% Similarity=0.367 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||++........... .....++..|+|||.+.
T Consensus 135 ~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 209 (314)
T cd05099 135 DLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK-TSNGRLPVKWMAPEALF 209 (314)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEccccccccccccccccc-cccCCCCccccCHHHHc
Confidence 45678899999999999 89999999999999999999999999999865543222111 11123346799999753
No 206
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.61 E-value=4e-15 Score=81.15 Aligned_cols=73 Identities=29% Similarity=0.428 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+
T Consensus 110 ~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~ 182 (292)
T cd06644 110 PQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR---RDSFIGTPYWMAPEVV 182 (292)
T ss_pred HHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc---cceecCCccccCceee
Confidence 356778899999999999 899999999999999999999999999987543222111 1134578899999987
No 207
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.61 E-value=1.6e-15 Score=82.70 Aligned_cols=75 Identities=21% Similarity=0.234 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.|++.|+.|+| +.+++|+|++|.|++++.+..++++|||++........... .....+++.|+|||.+.
T Consensus 131 ~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 205 (296)
T cd05051 131 TLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRV-QGRAPLPIRWMAWESVL 205 (296)
T ss_pred HHHHHHHHHHHHHHHHH---HcCccccccchhceeecCCCceEEccccceeecccCcceee-cCcCCCCceecCHHHhh
Confidence 46778899999999999 89999999999999999999999999999865443322111 11334567899999753
No 208
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.61 E-value=1.5e-15 Score=82.12 Aligned_cols=75 Identities=25% Similarity=0.366 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.|++.|+.|+| +.+++|+|++|.|++++.++.+++.|||++.......... ......++..|+|||.+.
T Consensus 120 ~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 194 (277)
T cd05032 120 KFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMAPESLK 194 (277)
T ss_pred HHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECCcccchhhccCcccc-cCCCCCccccccCHHHHh
Confidence 56778899999999999 8999999999999999999999999999886544322211 111334577899999753
No 209
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.60 E-value=3.2e-15 Score=80.75 Aligned_cols=73 Identities=19% Similarity=0.242 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++......... .......++..|+|||++
T Consensus 101 ~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~ 173 (268)
T cd05086 101 LQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI-ETEDDKCVPLRWLAPELV 173 (268)
T ss_pred HHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhh-hcccCCcCcccccCchhc
Confidence 4567889999999999 899999999999999999999999999987432211110 111134567889999976
No 210
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.60 E-value=2.7e-15 Score=80.66 Aligned_cols=75 Identities=20% Similarity=0.357 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+..++.|++.++.|+| +.+++|+|+++.|+++++++.+++.|||.+........... ....++..|++||.+.
T Consensus 102 ~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~y~~Pe~~~ 176 (260)
T cd05069 102 PQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR--QGAKFPIKWTAPEAAL 176 (260)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc--CCCccchhhCCHHHhc
Confidence 356778899999999999 89999999999999999999999999999866543221111 1223467799999753
No 211
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.60 E-value=1.5e-15 Score=81.98 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.|+.|+| +++++|+|++|.|++++.+..+++.|||............ .....++..|+|||.+.
T Consensus 107 ~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~ 181 (266)
T cd05064 107 GQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYT--TMSGKSPVLWAAPEAIQ 181 (266)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhc--ccCCCCceeecCHHHHh
Confidence 467889999999999999 8999999999999999999999999999765432221111 11223457899999753
No 212
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.60 E-value=1.8e-15 Score=84.52 Aligned_cols=72 Identities=21% Similarity=0.313 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| ..+++|+|+++.|++++.++.+++.|||++........ .....++..|+|||.+.
T Consensus 119 ~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~ 190 (353)
T cd07850 119 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM----MTPYVVTRYYRAPEVIL 190 (353)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC----CCCCcccccccCHHHHh
Confidence 45567899999999999 89999999999999999999999999999876543222 11335688999999764
No 213
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.60 E-value=1.9e-15 Score=81.51 Aligned_cols=75 Identities=21% Similarity=0.288 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.|++.|+.|+| .++++|+|++|+|++++.++.+++.|||++........... .....+++.|++||.+.
T Consensus 113 ~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~ 187 (272)
T cd05075 113 MLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQ-GRIAKMPVKWIAIESLA 187 (272)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccCcccceec-CCcccCCcccCCHHHcc
Confidence 46778899999999999 89999999999999999999999999999876543322111 11223466799998753
No 214
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.60 E-value=1.7e-15 Score=81.32 Aligned_cols=75 Identities=20% Similarity=0.338 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+.++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++........... ....++..|+|||.+.
T Consensus 100 ~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~y~~Pe~~~ 174 (256)
T cd05059 100 EWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS--QGTKFPVKWAPPEVFD 174 (256)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccccccc--CCCCCCccccCHHHhc
Confidence 356788999999999999 89999999999999999999999999998865543222111 1122345799999764
No 215
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.60 E-value=2.4e-15 Score=81.98 Aligned_cols=74 Identities=23% Similarity=0.323 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-CCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.++.|+| +++++|+|+++.|++++. ++.+++.|||.+......... .....+++.|+|||.+
T Consensus 110 ~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~aPE~~ 183 (295)
T cd07837 110 KTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS---YTHEIVTLWYRAPEVL 183 (295)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccc---cCCcccccCCCChHHh
Confidence 356778999999999999 899999999999999998 889999999988654332111 1123457889999975
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 184 ~ 184 (295)
T cd07837 184 L 184 (295)
T ss_pred h
Confidence 3
No 216
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.60 E-value=1.3e-15 Score=83.42 Aligned_cols=72 Identities=22% Similarity=0.389 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++.......... ....+++.|+|||.+
T Consensus 105 ~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~y~~PE~~ 176 (301)
T cd07873 105 NVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY---SNEVVTLWYRPPDIL 176 (301)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc---cccceeecccCcHHH
Confidence 45667899999999999 9999999999999999999999999999886543222111 133567899999975
No 217
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.60 E-value=2.7e-15 Score=83.28 Aligned_cols=76 Identities=24% Similarity=0.349 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.|+.|+| .++++|+|+++.|++++.++.+++.|||++........... .....++..|+|||.+.
T Consensus 134 ~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 209 (334)
T cd05100 134 KDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKK-TTNGRLPVKWMAPEALF 209 (334)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcccceeccccccccc-ccCCCcCceEcCHHHhc
Confidence 345678899999999999 89999999999999999999999999998865543221111 11223356799999763
No 218
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.60 E-value=2.5e-15 Score=80.74 Aligned_cols=74 Identities=19% Similarity=0.347 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.++..++.+++.++.|+| +.+++|+|+++.|++++.+..+++.|||.+........... ....++..|+|||.+
T Consensus 102 ~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~y~aPE~~ 175 (260)
T cd05070 102 PNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR--QGAKFPIKWTAPEAA 175 (260)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc--cCCCCCccccChHHH
Confidence 356788999999999999 88999999999999999999999999999876543221111 122345679999975
No 219
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.60 E-value=2.8e-15 Score=80.40 Aligned_cols=75 Identities=15% Similarity=0.294 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+.++.+++.++.|+| +++++|+|+++.|++++.++.+++.|||.+........... ....++..|+|||.+.
T Consensus 100 ~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~ 174 (256)
T cd05114 100 DMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS--SGAKFPVKWSPPEVFN 174 (256)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceecc--CCCCCchhhCChhhcc
Confidence 356788899999999999 89999999999999999999999999998865432221111 1223456799999764
No 220
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.60 E-value=3.1e-15 Score=80.74 Aligned_cols=75 Identities=24% Similarity=0.274 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..++.|++.++.|+| +.+++|+|+++.|++++.+..+++.|||++.......... ......++..|+|||++.
T Consensus 101 ~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 175 (269)
T cd05087 101 TLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV-TPDQLWVPLRWIAPELVD 175 (269)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee-cCCCcCCcccccCHhHhc
Confidence 34567899999999999 8999999999999999999999999999885433222111 111335677899999763
No 221
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.60 E-value=1.6e-15 Score=83.24 Aligned_cols=76 Identities=25% Similarity=0.356 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+........... .....+++.|+|||.+.
T Consensus 140 ~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 215 (307)
T cd05098 140 KDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK-TTNGRLPVKWMAPEALF 215 (307)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEcCCCcEEECCCcccccccccchhhc-cccCCCccceeChHHhc
Confidence 356788999999999999 89999999999999999999999999998865432211111 01122346799999753
No 222
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.60 E-value=2.6e-15 Score=80.42 Aligned_cols=74 Identities=38% Similarity=0.689 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.++| +.+++|+|++|+|++++.++.+++.|||.+......... .....++..|+|||.+.
T Consensus 98 ~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 171 (260)
T PF00069_consen 98 EEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN---FNPFVGTPEYMAPEVLQ 171 (260)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE---BSSSSSSGGGSCHHHHT
T ss_pred cccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence 356788999999999999 889999999999999999999999999988654211111 11446788999999864
No 223
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.60 E-value=2.6e-15 Score=82.35 Aligned_cols=75 Identities=24% Similarity=0.398 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++.++.|++.|+.|+| +++++|+|+++.|++++.++.+++.|||++........... .....++..|++||.+.
T Consensus 110 ~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~ 184 (303)
T cd05110 110 LLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN-ADGGKMPIKWMALECIH 184 (303)
T ss_pred HHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCcccccc-cCCCccccccCCHHHhc
Confidence 56788899999999999 89999999999999999999999999999875543222111 11223467899999753
No 224
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.59 E-value=3.3e-15 Score=80.27 Aligned_cols=75 Identities=17% Similarity=0.328 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+.......... .....++..|++||.+.
T Consensus 100 ~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~ 174 (256)
T cd05113 100 SQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS--SVGSKFPVRWSPPEVLL 174 (256)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceee--cCCCccChhhCCHHHHh
Confidence 457889999999999999 8999999999999999999999999999886554322111 11223456799999763
No 225
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.59 E-value=1.2e-15 Score=83.56 Aligned_cols=73 Identities=27% Similarity=0.488 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++......... .....++..|+|||.+.
T Consensus 118 ~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 190 (297)
T cd06659 118 QIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK---RKSLVGTPYWMAPEVIS 190 (297)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc---ccceecCccccCHHHHc
Confidence 56778899999999999 899999999999999999999999999987543322211 11346788999999764
No 226
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.59 E-value=2.7e-15 Score=81.37 Aligned_cols=74 Identities=20% Similarity=0.342 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||++......... .....++..|++||.+.
T Consensus 100 ~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~aPE~~~ 173 (286)
T cd07847 100 HLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD---YTDYVATRWYRAPELLV 173 (286)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCccc---ccCcccccccCCHHHHh
Confidence 457788999999999999 899999999999999999999999999998765433211 11335678899999753
No 227
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.59 E-value=2.6e-15 Score=82.49 Aligned_cols=74 Identities=23% Similarity=0.358 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.|+| +.+++|+|+++.|++++..+.+++.|||.+.......... ....+++.|+|||.+.
T Consensus 108 ~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~ 181 (309)
T cd07845 108 SQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM---TPKVVTLWYRAPELLL 181 (309)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC---CcccccccccChhhhc
Confidence 356778999999999999 8999999999999999999999999999987654332111 1224577899999763
No 228
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.59 E-value=2.4e-15 Score=82.33 Aligned_cols=76 Identities=24% Similarity=0.381 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccc-cCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHV-NDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++.......... .......++..|+|||.+
T Consensus 119 ~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 195 (310)
T cd07865 119 SEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELL 195 (310)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHh
Confidence 356778899999999999 8899999999999999999999999999886554322111 111234567889999975
No 229
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.59 E-value=3.5e-15 Score=82.88 Aligned_cols=76 Identities=25% Similarity=0.432 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc--ccCCCccccccCccCcce
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH--VNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe~ 79 (82)
.++..++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++......... ........|+..|+|||.
T Consensus 107 ~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 183 (337)
T cd07852 107 VHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEI 183 (337)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCcee
Confidence 345678899999999999 899999999999999999999999999988765432211 011123467889999997
Q ss_pred e
Q 040586 80 M 80 (82)
Q Consensus 80 ~ 80 (82)
+
T Consensus 184 ~ 184 (337)
T cd07852 184 L 184 (337)
T ss_pred e
Confidence 6
No 230
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.59 E-value=3.4e-15 Score=81.60 Aligned_cols=75 Identities=23% Similarity=0.296 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.+++.|+.|+| +.+++|+|++|.|++++.+..+++.|||++.......... ......++..|+|||.+.
T Consensus 130 ~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 204 (295)
T cd05097 130 NLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYR-IQGRAVLPIRWMAWESIL 204 (295)
T ss_pred HHHHHHHHHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecccccccccccCccee-ccCcCcCceeecChhhhc
Confidence 45678899999999999 8999999999999999999999999999886543322111 111234467899999753
No 231
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.59 E-value=2.1e-15 Score=81.19 Aligned_cols=73 Identities=25% Similarity=0.432 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+.......... ....++..|+|||.+.
T Consensus 107 ~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~ape~~~ 179 (267)
T cd08229 107 TVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA---HSLVGTPYYMSPERIH 179 (267)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCccc---ccccCCcCccCHHHhc
Confidence 45678899999999999 9999999999999999999999999999876554332211 1335788999999763
No 232
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.59 E-value=2.2e-15 Score=81.10 Aligned_cols=73 Identities=26% Similarity=0.439 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| .++++|+|+++.|++++.++.+++.|||++.......... ....+++.|+|||.+.
T Consensus 107 ~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~---~~~~~~~~~~aPE~~~ 179 (267)
T cd08228 107 TVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA---HSLVGTPYYMSPERIH 179 (267)
T ss_pred HHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHH---hcCCCCccccChhhhc
Confidence 45678899999999999 8999999999999999999999999999886654332211 1335778899999763
No 233
>PHA02988 hypothetical protein; Provisional
Probab=99.59 E-value=1.6e-15 Score=82.65 Aligned_cols=71 Identities=11% Similarity=0.209 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+.+.++.+++.|+.++| + .+++|+|+++.|++++.++.+|+.|||++........ ...|+..|+|||.+
T Consensus 122 ~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~y~aPE~~ 192 (283)
T PHA02988 122 KTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF------KNVNFMVYFSYKML 192 (283)
T ss_pred hHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc------cccCcccccCHHHh
Confidence 456788999999999999 6 3788999999999999999999999998865432221 33678899999986
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 193 ~ 193 (283)
T PHA02988 193 N 193 (283)
T ss_pred h
Confidence 4
No 234
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.59 E-value=3.8e-15 Score=80.77 Aligned_cols=75 Identities=25% Similarity=0.370 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+........ .......++..|+|||.+.
T Consensus 99 ~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~ 173 (286)
T cd07832 99 AQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--RLYSHQVATRWYRAPELLY 173 (286)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--CccccccCcccccCceeee
Confidence 356778899999999999 89999999999999999999999999998865543321 1112346788999999763
No 235
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.59 E-value=2.7e-15 Score=82.07 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.|+.++| +.+++|+|++|.|++++.+..+++.|||++........ . .....+..|++||.+.
T Consensus 120 ~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~--~~~~~~~~y~aPE~~~ 191 (297)
T cd05089 120 QLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVK--K--TMGRLPVRWMAIESLN 191 (297)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeEEECCcCCCccccceec--c--CCCCcCccccCchhhc
Confidence 56788999999999999 89999999999999999999999999998753221111 0 0112245699999753
No 236
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.59 E-value=4.9e-15 Score=79.87 Aligned_cols=75 Identities=23% Similarity=0.299 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.|+.|+| +.+++|+|++|+|++++.+..+++.|||++........... .....++..|++||.+.
T Consensus 114 ~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~ 188 (273)
T cd05035 114 TLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQ-GRIAKMPVKWIAIESLA 188 (273)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCccceeeccccccccc-cccccCCccccCHhhcc
Confidence 45678899999999999 89999999999999999999999999999876543322111 11223356799999753
No 237
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.59 E-value=5.2e-15 Score=80.13 Aligned_cols=75 Identities=23% Similarity=0.319 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.++| +++++|+|+++.|++++.++.+++.|||++........... .....+++.|+|||.+.
T Consensus 123 ~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 197 (280)
T cd05049 123 QLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRV-GGHTMLPIRWMPPESIM 197 (280)
T ss_pred HHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeEEECCcccceecccCcceec-CCCCcccceecChhhhc
Confidence 45678899999999999 89999999999999999999999999998865432221111 11234567899999764
No 238
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.59 E-value=3.8e-15 Score=86.63 Aligned_cols=74 Identities=23% Similarity=0.275 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| +.+++|+|+++.|++++.+..+++.|||++.......... .....+++.|++||.+.
T Consensus 310 ~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~--~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 310 VIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN--PLYGMLDPRYSPPEELV 383 (507)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC--ccccCCCcceeChhhhc
Confidence 45677899999999999 8899999999999999999999999999986543222111 11223478999999763
No 239
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.59 E-value=2.9e-15 Score=81.21 Aligned_cols=72 Identities=29% Similarity=0.495 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCC-CeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSR-PIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| ++ +++|+|+++.|++++.++.+++.|||++........ .....++..|+|||.+.
T Consensus 104 ~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~ 176 (283)
T cd06617 104 ILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA----KTIDAGCKPYMAPERIN 176 (283)
T ss_pred HHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc----cccccCCccccChhhcC
Confidence 45688999999999999 76 899999999999999999999999998865432211 11235678899999763
No 240
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.59 E-value=3.9e-15 Score=80.23 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.+++.++.|+| +.+++|+|+++.|++++.+..+++.|||++..................++.|++||.+.
T Consensus 107 ~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~ 183 (268)
T cd05063 107 YQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIA 183 (268)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhh
Confidence 356788999999999999 89999999999999999999999999998865543221111111112245799999753
No 241
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.59 E-value=4.9e-15 Score=79.11 Aligned_cols=75 Identities=28% Similarity=0.396 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.+++.++.|+| +++++|+|+++.|++++.++.+++.|||++........... ....++..|+|||.+.
T Consensus 93 ~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~ 167 (250)
T cd05085 93 KQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS--GLKQIPIKWTAPEALN 167 (250)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccC--CCCCCcccccCHHHhc
Confidence 356778899999999999 89999999999999999999999999998865433222111 1223356799999764
No 242
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.59 E-value=4.8e-15 Score=79.39 Aligned_cols=73 Identities=18% Similarity=0.311 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+.......... ....|++.|+|||.+.
T Consensus 101 ~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~aPE~~~ 173 (255)
T cd08219 101 TILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA---CTYVGTPYYVPPEIWE 173 (255)
T ss_pred HHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc---ccccCCccccCHHHHc
Confidence 45678899999999999 9999999999999999999999999999886554322211 1346788899999753
No 243
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=1.8e-15 Score=89.39 Aligned_cols=48 Identities=23% Similarity=0.380 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
...++.++..++++.| +.++||||++++|||+|.++.+|+.|||++..
T Consensus 731 ARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 731 ARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred HHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeecccccc
Confidence 4456789999999999 99999999999999999999999999998753
No 244
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.59 E-value=3.1e-15 Score=81.94 Aligned_cols=74 Identities=26% Similarity=0.456 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.+++.++.++| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 115 ~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 188 (296)
T cd06655 115 AQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVT 188 (296)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc---CCCcCCCccccCcchhc
Confidence 467788899999999999 899999999999999999999999999987654322211 11346788999999764
No 245
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.59 E-value=3.1e-15 Score=83.15 Aligned_cols=71 Identities=28% Similarity=0.549 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCC-CeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSR-PIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~-~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.+++.++.|+| .. +++|+|+++.|++++.++.+++.|||++........ ....|+..|+|||.+.
T Consensus 104 ~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~ 175 (333)
T cd06650 104 ILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSPERLQ 175 (333)
T ss_pred HHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc-----ccCCCCccccCHHHhc
Confidence 34577889999999999 64 699999999999999999999999998854432211 1346789999999864
No 246
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.59 E-value=4.9e-15 Score=80.46 Aligned_cols=71 Identities=23% Similarity=0.359 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++.......... ....|++.|+|||.+
T Consensus 126 ~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~ 196 (286)
T cd06638 126 IAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR---NTSVGTPFWMAPEVI 196 (286)
T ss_pred HHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCcc---ccccCCCcccChhhh
Confidence 4567899999999999 8999999999999999999999999999986654322211 134678999999976
No 247
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.59 E-value=3.7e-15 Score=80.41 Aligned_cols=77 Identities=21% Similarity=0.272 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.++.++| +.+++|+|+++.|++++.+..+++.|||++.................++..|++||.+.
T Consensus 106 ~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~ 182 (267)
T cd05066 106 IQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 182 (267)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhc
Confidence 356788899999999999 89999999999999999999999999998876543222111111122345799999764
No 248
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.58 E-value=3.8e-15 Score=80.81 Aligned_cols=73 Identities=22% Similarity=0.340 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| ..+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+.
T Consensus 101 ~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 173 (284)
T cd07860 101 LIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILL 173 (284)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc---cccccccccccCCeEEe
Confidence 46778899999999999 899999999999999999999999999987654322211 11234678899999764
No 249
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.58 E-value=4.8e-15 Score=80.51 Aligned_cols=76 Identities=24% Similarity=0.299 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +.+++|+|++|.|++++.++.+++.|||++.......... ......+++.|+|||.+.
T Consensus 122 ~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~ 197 (280)
T cd05092 122 GQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR-VGGRTMLPIRWMPPESIL 197 (280)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceee-cCCCccccccccCHHHhc
Confidence 356778899999999999 9999999999999999999999999999886543322111 111223467899999754
No 250
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.58 E-value=4.2e-15 Score=81.51 Aligned_cols=71 Identities=21% Similarity=0.297 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.-.+..|.+.|++++| +.+++|||++|+|+++......|+.|||++...... ......+.+.+|.|||.+.
T Consensus 120 is~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~----~~mtpyVvtRyyrapevil 190 (369)
T KOG0665|consen 120 ISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD----FMMTPYVVTRYYRAPEVIL 190 (369)
T ss_pred HHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCcc----cccCchhheeeccCchhee
Confidence 3456789999999999 999999999999999999999999999999765433 1223567789999999875
No 251
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.58 E-value=1.7e-15 Score=82.89 Aligned_cols=74 Identities=27% Similarity=0.463 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||.+......... .....+++.|+|||.+.
T Consensus 116 ~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 189 (296)
T cd06654 116 GQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVT 189 (296)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc---cCcccCCccccCHHHHc
Confidence 356778899999999999 899999999999999999999999999987543322111 11346788999999763
No 252
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.58 E-value=3.9e-15 Score=81.14 Aligned_cols=75 Identities=24% Similarity=0.367 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.|++.++.|+| +++++|+|++|.|++++.++.++++|||++........... .....++..|++||.+.
T Consensus 120 ~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~~pE~~~ 194 (288)
T cd05061 120 EMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMAPESLK 194 (288)
T ss_pred HHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccc-cCCCcccccccCHHHhc
Confidence 45678899999999999 99999999999999999999999999998865433222111 11224467799999764
No 253
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.58 E-value=3.4e-15 Score=81.32 Aligned_cols=73 Identities=23% Similarity=0.397 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++.......... ....++..|+|||.+.
T Consensus 104 ~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~aPE~~~ 176 (291)
T cd07844 104 NVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY---SNEVVTLWYRPPDVLL 176 (291)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc---cccccccccCCcHHhh
Confidence 45667889999999999 8999999999999999999999999999875433221111 1224578899999753
No 254
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.58 E-value=4.3e-15 Score=80.02 Aligned_cols=72 Identities=31% Similarity=0.455 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|+|||.+
T Consensus 107 ~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~~PE~~ 178 (267)
T cd06646 107 QIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK---RKSFIGTPYWMAPEVA 178 (267)
T ss_pred HHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccccc---cCccccCccccCHhHc
Confidence 45677899999999999 899999999999999999999999999998765432211 1134678899999976
No 255
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.58 E-value=5.9e-15 Score=80.38 Aligned_cols=74 Identities=24% Similarity=0.378 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.......... .....|+..|++||.+.
T Consensus 106 ~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~ 179 (290)
T cd05613 106 EVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVER--AYSFCGTIEYMAPDIVR 179 (290)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccc--cccccCCcccCChhhcc
Confidence 34556679999999999 8999999999999999999999999999886654322211 11345788999999763
No 256
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.58 E-value=3.9e-15 Score=88.26 Aligned_cols=77 Identities=26% Similarity=0.359 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++++++.||+.|+.||. ..+++|||+.+.|+++..+..+|++|||+++................-+..|||||.+.
T Consensus 418 ~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~ 494 (609)
T KOG0200|consen 418 KDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF 494 (609)
T ss_pred HHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc
Confidence 467899999999999999 88999999999999999999999999999986554444332111111256799999875
No 257
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=2.7e-15 Score=89.54 Aligned_cols=70 Identities=31% Similarity=0.478 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEc-cCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQ-ERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..||+.|+.||| .+.++|||+|-+|+++. -.+.+|++|||.++.+.--... ...+.||.-|||||+|.
T Consensus 679 fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~---TETFTGTLQYMAPEvID 749 (1226)
T KOG4279|consen 679 FYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEVID 749 (1226)
T ss_pred HHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCcc---ccccccchhhhChHhhc
Confidence 45789999999999 99999999999999996 4788999999988765432222 22678999999999874
No 258
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.58 E-value=4e-15 Score=83.02 Aligned_cols=69 Identities=29% Similarity=0.447 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+..++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++....... ....++..|+|||.+
T Consensus 121 ~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~ 189 (345)
T cd07877 121 HVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIM 189 (345)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecccccccccccc------cccccCCCccCHHHH
Confidence 46678899999999999 8999999999999999999999999999875432211 134668889999975
No 259
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.58 E-value=7.4e-15 Score=78.97 Aligned_cols=75 Identities=19% Similarity=0.385 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.++| ..+++|+|+++.|++++..+.+++.|||.+........... ....++..|++||.+.
T Consensus 102 ~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~y~~PE~~~ 176 (260)
T cd05073 102 PKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR--EGAKFPIKWTAPEAIN 176 (260)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc--cCCcccccccCHhHhc
Confidence 356778899999999999 88999999999999999999999999998866543222111 1223456799999763
No 260
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.58 E-value=2e-15 Score=89.96 Aligned_cols=79 Identities=23% Similarity=0.333 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcccc------CCCccccccCcc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVN------DTDKLIGTLGFI 75 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 75 (82)
++.+.|+.+++.||.++|.. +.++||||||.+|+|++.++..||+|||-+........... .......|+-|+
T Consensus 144 ~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YR 222 (738)
T KOG1989|consen 144 DEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYR 222 (738)
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCcccc
Confidence 36789999999999999954 56799999999999999999999999998754322111110 111223588999
Q ss_pred Ccceec
Q 040586 76 APECMT 81 (82)
Q Consensus 76 ~pe~~~ 81 (82)
+||.|.
T Consensus 223 sPEMID 228 (738)
T KOG1989|consen 223 SPEMID 228 (738)
T ss_pred ChHHHh
Confidence 999763
No 261
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.58 E-value=4.9e-15 Score=80.74 Aligned_cols=72 Identities=22% Similarity=0.353 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.++.++.|++.++.++| ..+++|+|+++.|++++.++.+++.|||++.......... ....|+..|+|||.+
T Consensus 129 ~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~ 200 (291)
T cd06639 129 MISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR---NTSVGTPFWMAPEVI 200 (291)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccc---cCccCCccccChhhh
Confidence 45678899999999999 8999999999999999999999999999876543222111 133578889999975
No 262
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.58 E-value=4.8e-15 Score=80.46 Aligned_cols=74 Identities=24% Similarity=0.419 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++.......... ....++..|+|||.+.
T Consensus 100 ~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~ 173 (286)
T cd07846 100 SRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY---TDYVATRWYRAPELLV 173 (286)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc---CcccceeeccCcHHhc
Confidence 456788999999999999 8899999999999999999999999999986654332211 1345688899999753
No 263
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.57 E-value=4.8e-15 Score=80.25 Aligned_cols=71 Identities=25% Similarity=0.442 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.|+.++| ..+++|+|+++.|++++. +.+++.|||++.......... ...++..|+|||.+
T Consensus 100 ~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~----~~~~~~~y~aPE~~ 170 (282)
T cd07831 100 KRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT----EYISTRWYRAPECL 170 (282)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC----CCCCCcccCChhHh
Confidence 456788999999999999 899999999999999999 999999999886554322211 23568899999965
No 264
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.57 E-value=7.1e-15 Score=83.64 Aligned_cols=75 Identities=21% Similarity=0.387 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.|+.|+| .++++|+|+++.|++++....+++.|||++........... .....++..|++||.+.
T Consensus 240 ~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 314 (401)
T cd05107 240 DLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYIS-KGSTFLPLKWMAPESIF 314 (401)
T ss_pred HHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccccc-CCCcCCCCceeChHHhc
Confidence 46778899999999999 89999999999999999999999999999875432211111 11335678899999764
No 265
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.57 E-value=7.1e-15 Score=79.80 Aligned_cols=74 Identities=27% Similarity=0.419 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.+++.++.|+| ..+++|+|+++.|++++.++.++++|||++.......... .....++..|+|||.+.
T Consensus 101 ~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~ 174 (288)
T cd07833 101 AVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP--LTDYVATRWYRAPELLV 174 (288)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc--ccCcccccCCcCCchhc
Confidence 45677899999999999 8999999999999999999999999999886654332211 11346688899999764
No 266
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.57 E-value=8.3e-15 Score=79.44 Aligned_cols=75 Identities=17% Similarity=0.310 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
...+.++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||.+............ ....++..|++||.+
T Consensus 109 ~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~-~~~~~~~~y~~PE~~ 183 (279)
T cd05057 109 QYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHA-EGGKVPIKWMALESI 183 (279)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceec-CCCcccccccCHHHh
Confidence 356788999999999999 899999999999999999999999999998765432221111 011235679999965
No 267
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.57 E-value=4.2e-15 Score=81.02 Aligned_cols=74 Identities=23% Similarity=0.319 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+.+.++.|++.++.|+| +.+++|+|++|.|++++.++.+++.|||++........... .....++..|++||.+
T Consensus 128 ~~~~i~~~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~apE~~ 201 (290)
T cd05045 128 DLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVK-RSKGRIPVKWMAIESL 201 (290)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhc-ccCCCCCccccCHHHH
Confidence 45788899999999999 89999999999999999999999999998865432221111 1122446689999965
No 268
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.57 E-value=4.8e-15 Score=82.29 Aligned_cols=75 Identities=24% Similarity=0.388 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcccc-CCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVN-DTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.|+.|+| ..+++|+|+++.|++++.++.++++|||++........... ......++..|+|||.+
T Consensus 108 ~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~ 183 (334)
T cd07855 108 HIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL 183 (334)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHh
Confidence 46778899999999999 89999999999999999999999999999876543222111 11234678899999975
No 269
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.57 E-value=8.5e-15 Score=79.21 Aligned_cols=70 Identities=21% Similarity=0.352 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-ceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.|+.++| +.+++|+|+++.|++++.++ .+++.|||.+....... ...++..|+|||.+
T Consensus 109 ~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 178 (267)
T PHA03390 109 AEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS-------CYDGTLDYFSPEKI 178 (267)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc-------cCCCCCcccChhhh
Confidence 456788999999999999 88999999999999999888 89999999876543221 23568899999976
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 179 ~ 179 (267)
T PHA03390 179 K 179 (267)
T ss_pred c
Confidence 4
No 270
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.57 E-value=8.5e-15 Score=79.34 Aligned_cols=75 Identities=24% Similarity=0.332 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.|+.++| ..+++|+|+++.|++++.++.++++|||.+.......... .....++..|+|||.+.
T Consensus 100 ~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~ 174 (287)
T cd07840 100 SQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD--YTNRVITLWYRPPELLL 174 (287)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc--ccccccccccCCceeeE
Confidence 356788999999999999 8899999999999999999999999999887654432111 11235578899999653
No 271
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.57 E-value=2.8e-15 Score=82.31 Aligned_cols=72 Identities=22% Similarity=0.305 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.|+.|+| +++++|+|++|+|++++.++.+++.|||++........ .....++..|+|||.+.
T Consensus 125 ~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~ 196 (303)
T cd05088 125 QLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLN 196 (303)
T ss_pred HHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcEEeCccccCcccchhhh----cccCCCcccccCHHHHh
Confidence 46778999999999999 89999999999999999999999999998753211110 00122356799999653
No 272
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.57 E-value=6.5e-15 Score=80.87 Aligned_cols=76 Identities=20% Similarity=0.374 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.+++.++.|+| +++++|+|+++.|++++.+..+++.|||++........... .....++..|+|||.+.
T Consensus 141 ~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 216 (302)
T cd05055 141 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVV-KGNARLPVKWMAPESIF 216 (302)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceee-cCCCCcccccCCHhhhc
Confidence 456778899999999999 89999999999999999999999999999865443221111 11234567899999753
No 273
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.57 E-value=6.9e-15 Score=79.25 Aligned_cols=76 Identities=20% Similarity=0.295 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++............ ....+++.|++||.+.
T Consensus 106 ~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~ 181 (266)
T cd05033 106 GQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTT-KGGKIPIRWTAPEAIA 181 (266)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceec-cCCCCCccccChhhhc
Confidence 456788999999999999 899999999999999999999999999998765421111110 0123456799999764
No 274
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.57 E-value=1.3e-14 Score=78.68 Aligned_cols=72 Identities=24% Similarity=0.358 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+++.++.|++.++.|+| +++++|+|+++.|++++.++.++++|||.+......... ....++..|+|||.+
T Consensus 99 ~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~aPE~~ 170 (283)
T cd07830 99 SVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY----TDYVSTRWYRAPEIL 170 (283)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc----CCCCCcccccCceee
Confidence 456788999999999999 899999999999999999999999999988654432221 133567889999976
No 275
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.57 E-value=1.1e-14 Score=78.36 Aligned_cols=73 Identities=25% Similarity=0.425 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.+++.++.++| +.+++|+|+++.|++++.++.+++.|||.+.......... ....+++.|+|||.+.
T Consensus 107 ~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~y~apE~~~ 179 (267)
T cd08224 107 TIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA---HSLVGTPYYMSPERIH 179 (267)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCccc---ceecCCccccCHHHhc
Confidence 56778899999999999 8999999999999999999999999999886554322211 1345788899999753
No 276
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.57 E-value=5.1e-15 Score=81.09 Aligned_cols=76 Identities=20% Similarity=0.346 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccc--------cCCCccccccCc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHV--------NDTDKLIGTLGF 74 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 74 (82)
+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++.......... .......+++.|
T Consensus 116 ~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 192 (311)
T cd07866 116 QIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWY 192 (311)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCc
Confidence 56678899999999999 8999999999999999999999999999886543222111 111233567889
Q ss_pred cCcceec
Q 040586 75 IAPECMT 81 (82)
Q Consensus 75 ~~pe~~~ 81 (82)
+|||.+.
T Consensus 193 ~aPE~~~ 199 (311)
T cd07866 193 RPPELLL 199 (311)
T ss_pred CChHHhh
Confidence 9999753
No 277
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.57 E-value=1.3e-14 Score=78.29 Aligned_cols=75 Identities=23% Similarity=0.344 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.+++.++.|+| +.+++|+|+++.|++++.++.+++.|||++............ ...++..|+|||.+.
T Consensus 107 ~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~--~~~~~~~y~aPE~~~ 181 (270)
T cd05056 107 ASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKAS--KGKLPIKWMAPESIN 181 (270)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccccceecC--CCCccccccChhhhc
Confidence 356778899999999999 899999999999999999999999999988655433221111 223356799999753
No 278
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.57 E-value=5.4e-15 Score=79.90 Aligned_cols=72 Identities=22% Similarity=0.310 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.|+.|+| +.+++|+|++|.|++++.+..+++.|||++....... .. .....+..|+|||.+.
T Consensus 113 ~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~---~~-~~~~~~~~y~apE~~~ 184 (270)
T cd05047 113 QLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KK-TMGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCccccchhh---hc-cCCCCccccCChHHHc
Confidence 56788899999999999 8999999999999999999999999999874321110 00 0112356799999753
No 279
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=9e-15 Score=81.53 Aligned_cols=73 Identities=26% Similarity=0.403 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
+..+..+|..++.|+| ..++|.+|++.+|++++..+.+|+.|+|+.+.-..+ ....+.++|||.|.|||++++
T Consensus 353 arfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~~---gd~tstfcgtpnyiapeilrg 425 (593)
T KOG0695|consen 353 ARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP---GDTTSTFCGTPNYIAPEILRG 425 (593)
T ss_pred hhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCCC---CcccccccCCCcccchhhhcc
Confidence 4456788999999999 999999999999999999999999999988542211 122347899999999999874
No 280
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.57 E-value=7.7e-15 Score=79.61 Aligned_cols=74 Identities=23% Similarity=0.344 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||.+......... .....++..|+|||.+.
T Consensus 99 ~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~ 172 (283)
T cd07835 99 PLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILL 172 (283)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc---cCccccccCCCCCceee
Confidence 356788999999999999 899999999999999999999999999988544322111 11235578899999763
No 281
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.57 E-value=9.1e-15 Score=78.42 Aligned_cols=73 Identities=30% Similarity=0.438 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+......... .....++..|++||.+.
T Consensus 102 ~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~~Pe~~~ 174 (262)
T cd06613 102 QIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK---RKSFIGTPYWMAPEVAA 174 (262)
T ss_pred HHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhhc---cccccCCccccCchhhc
Confidence 45678899999999999 899999999999999999999999999987654322111 11346788899999764
No 282
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.57 E-value=8.8e-15 Score=79.81 Aligned_cols=70 Identities=33% Similarity=0.490 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++...... .....+++.|++||.+.
T Consensus 102 ~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~ 171 (290)
T cd05580 102 VARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------TYTLCGTPEYLAPEIIL 171 (290)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------CCCCCCCccccChhhhc
Confidence 45667899999999999 899999999999999999999999999988654433 11346788999999764
No 283
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.56 E-value=9.6e-15 Score=78.41 Aligned_cols=76 Identities=30% Similarity=0.564 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccC-CCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVND-TDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~ 81 (82)
....++.+++.++.++| +.+++|+|+++.|++++.++.+++.|||.+............ .....++..|++||.+.
T Consensus 100 ~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~ 176 (264)
T cd06626 100 VIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVIT 176 (264)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhcc
Confidence 45678899999999999 899999999999999999999999999988665433222111 11345678899999864
No 284
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.56 E-value=4.6e-15 Score=81.26 Aligned_cols=73 Identities=27% Similarity=0.464 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.......... ....+++.|++||.+.
T Consensus 116 ~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~ 188 (297)
T cd06656 116 QIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVT 188 (297)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc---CcccCCccccCHHHHc
Confidence 56778899999999999 8899999999999999999999999999886543322211 1345788999999763
No 285
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.56 E-value=1.1e-14 Score=78.01 Aligned_cols=73 Identities=25% Similarity=0.423 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+......... .....+++.|+|||.+.
T Consensus 102 ~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~---~~~~~~~~~y~ape~~~ 174 (256)
T cd08221 102 MVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM---AETVVGTPYYMSPELCQ 174 (256)
T ss_pred HHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccccc---ccccCCCccccCHhhcC
Confidence 56778899999999999 889999999999999999999999999988765433321 12446788999999764
No 286
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.56 E-value=4.6e-15 Score=79.96 Aligned_cols=76 Identities=32% Similarity=0.549 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.|+.||| +++++|+++++.|++++.+..+|+++||+............ .........|+|||.+.
T Consensus 103 ~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~ 178 (259)
T PF07714_consen 103 QQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN-DSSQQLPLRYLAPEVLK 178 (259)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE-STTSESGGGGS-HHHHH
T ss_pred cccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 467889999999999999 88999999999999999999999999999876632222111 11234567899999763
No 287
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.56 E-value=1.2e-14 Score=78.12 Aligned_cols=75 Identities=19% Similarity=0.389 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++........... ....++..|++||.+.
T Consensus 102 ~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~y~~pe~~~ 176 (260)
T cd05067 102 NKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR--EGAKFPIKWTAPEAIN 176 (260)
T ss_pred HHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc--cCCcccccccCHHHhc
Confidence 356778899999999999 89999999999999999999999999998866542222111 1223467899999753
No 288
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.56 E-value=1.1e-14 Score=77.93 Aligned_cols=76 Identities=24% Similarity=0.348 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||++........... ......+..|+|||.+.
T Consensus 94 ~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 169 (252)
T cd05084 94 KELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST-GGMKQIPVKWTAPEALN 169 (252)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCccccccccccc-CCCCCCceeecCchhhc
Confidence 356778899999999999 89999999999999999999999999998864332211110 01112245699999764
No 289
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.56 E-value=6.2e-15 Score=79.99 Aligned_cols=72 Identities=29% Similarity=0.467 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....|++.|+|||.+.
T Consensus 123 ~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~l~ 194 (282)
T cd06636 123 IAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIA 194 (282)
T ss_pred HHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccC---CCcccccccccCHhhcC
Confidence 4567889999999999 899999999999999999999999999987654322111 12346788999999763
No 290
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.56 E-value=6.4e-15 Score=79.36 Aligned_cols=72 Identities=28% Similarity=0.463 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+..++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+......... .....++..|+|||.+
T Consensus 114 ~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~ 185 (275)
T cd06608 114 WIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR---RNTFIGTPYWMAPEVI 185 (275)
T ss_pred HHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccceecccchhh---hcCccccccccCHhHh
Confidence 45668899999999999 899999999999999999999999999988654332211 1134678899999975
No 291
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.56 E-value=1.2e-14 Score=78.80 Aligned_cols=73 Identities=25% Similarity=0.375 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+.+.++.|++.|+.++| +.+++|+|+++.|++++.++.+++.|||.+......... ....++..|++||.+.
T Consensus 107 ~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~PE~~~ 179 (287)
T cd07838 107 ETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL----TSVVVTLWYRAPEVLL 179 (287)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceeccCCccc----ccccccccccChHHhc
Confidence 356778999999999999 899999999999999999999999999988665433211 1234678899999764
No 292
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.56 E-value=8.2e-15 Score=79.22 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.|+| +.+++|+|++|.|++++..+.+++.+|+++......... ......++..|++||.+.
T Consensus 117 ~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~ 191 (275)
T cd05046 117 KQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY--KLRNALIPLRWLAPEAVQ 191 (275)
T ss_pred HHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcccccccccCccccc--ccCCceeEEeecChhhhc
Confidence 456778899999999999 899999999999999999999999999987543322211 111335567799999753
No 293
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.56 E-value=1.1e-14 Score=79.50 Aligned_cols=72 Identities=26% Similarity=0.376 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-CCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...++.|++.|+.|+| +++++|+|+++.|++++. +..+++.|||++......... .....+++.|++||.+.
T Consensus 104 ~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~~PE~~~ 176 (294)
T PLN00009 104 IKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT---FTHEVVTLWYRAPEILL 176 (294)
T ss_pred HHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc---cccCceeecccCHHHHh
Confidence 4567889999999999 899999999999999985 557899999988654332111 11335678999999753
No 294
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.56 E-value=2.2e-14 Score=78.85 Aligned_cols=69 Identities=26% Similarity=0.452 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.++..++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++....... ...+++.|+|||.+
T Consensus 115 ~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 183 (307)
T cd06607 115 VEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN-------SFVGTPYWMAPEVI 183 (307)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC-------CccCCccccCceee
Confidence 356678899999999999 8999999999999999999999999999875443221 33567889999976
No 295
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.56 E-value=7.5e-15 Score=80.27 Aligned_cols=74 Identities=20% Similarity=0.336 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+++.++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||.+.......... .....++..|++||.+
T Consensus 116 ~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~y~~PE~~ 189 (302)
T cd07864 116 DHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRP--YTNKVITLWYRPPELL 189 (302)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccc--cccceeccCccChHHh
Confidence 456788999999999999 8999999999999999999999999999886654322111 1122456789999965
No 296
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.56 E-value=5.4e-15 Score=82.37 Aligned_cols=70 Identities=23% Similarity=0.358 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++...... .....++..|+|||.+.
T Consensus 118 ~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~ 187 (342)
T cd07879 118 KVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE------MTGYVVTRWYRAPEVIL 187 (342)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC------CCCceeeecccChhhhc
Confidence 45667899999999999 899999999999999999999999999987543221 11345678899999763
No 297
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.56 E-value=1e-14 Score=78.42 Aligned_cols=70 Identities=20% Similarity=0.426 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCc--------eEEeecceeeecCCCCccccCCCccccccC
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNV--------AKFFNFSVSISIPEGKTHVNDTDKLIGTLG 73 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (82)
..++.++.|++.++.|+| +++++|+|+++.|++++.+.. +++.|||++...... ....+++.
T Consensus 100 ~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~-------~~~~~~~~ 169 (258)
T cd05078 100 SWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK-------EILLERIP 169 (258)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc-------hhccccCC
Confidence 346678899999999999 999999999999999987654 588888876433211 12356788
Q ss_pred ccCcceec
Q 040586 74 FIAPECMT 81 (82)
Q Consensus 74 ~~~pe~~~ 81 (82)
|+|||.+.
T Consensus 170 y~aPE~~~ 177 (258)
T cd05078 170 WVPPECIE 177 (258)
T ss_pred ccCchhcc
Confidence 99999764
No 298
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.56 E-value=1.2e-14 Score=78.68 Aligned_cols=77 Identities=23% Similarity=0.424 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.++.++| +++++|+|+++.|++++.++.+++.|||.+.................++..|++||.+.
T Consensus 109 ~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~ 185 (284)
T cd05038 109 KRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR 185 (284)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHc
Confidence 456788999999999999 89999999999999999999999999998876542221111111223355688998653
No 299
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.55 E-value=3.4e-15 Score=88.10 Aligned_cols=74 Identities=23% Similarity=0.349 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++-++.|++.++.||| +.+.+|||+...|+++++...+|++|||+++............. .-++.|||||.+.
T Consensus 492 tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~--kLPIKWmaPESIN 565 (974)
T KOG4257|consen 492 TLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRG--KLPIKWMAPESIN 565 (974)
T ss_pred HHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcccc--ccceeecCccccc
Confidence 45678999999999999 89999999999999999999999999999988776665544322 2268899999874
No 300
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.55 E-value=1.1e-14 Score=78.97 Aligned_cols=73 Identities=27% Similarity=0.472 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.+++.++.|+| .++++|+|++++|++++.++.+++.|||++......... .....++..|++||.+.
T Consensus 102 ~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 174 (277)
T cd06642 102 YIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---RNTFVGTPFWMAPEVIK 174 (277)
T ss_pred HHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcchh---hhcccCcccccCHHHhC
Confidence 45677899999999999 899999999999999999999999999988654432211 11345788899999764
No 301
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.55 E-value=1.6e-14 Score=77.23 Aligned_cols=74 Identities=24% Similarity=0.366 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.++..++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++............ ...+++.|++||.+
T Consensus 103 ~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~y~~Pe~~ 176 (258)
T smart00219 103 SDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK--GGKLPIRWMAPESL 176 (258)
T ss_pred HHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccccccccc--cCCCcccccChHHh
Confidence 356788999999999999 899999999999999999999999999998765543222111 12356789999975
No 302
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.55 E-value=9.5e-15 Score=78.43 Aligned_cols=73 Identities=23% Similarity=0.324 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+........... ...++..|++||.+
T Consensus 104 ~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~---~~~~~~~~~~PE~~ 176 (261)
T cd05148 104 ASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS---DKKIPYKWTAPEAA 176 (261)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccccc---CCCCceEecCHHHH
Confidence 456778899999999999 89999999999999999999999999998865543222111 22345679999965
No 303
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.55 E-value=9.1e-15 Score=79.68 Aligned_cols=73 Identities=23% Similarity=0.500 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+......... .....|++.|++||.+.
T Consensus 116 ~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~aPE~~~ 188 (285)
T cd06648 116 QIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR---RKSLVGTPYWMAPEVIS 188 (285)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc---cccccCCccccCHHHhc
Confidence 45678999999999999 899999999999999999999999999987543322111 11345788999999764
No 304
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.55 E-value=1.4e-14 Score=77.63 Aligned_cols=70 Identities=26% Similarity=0.442 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+........ ....+..|+|||.+.
T Consensus 101 ~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~y~~pe~~~ 170 (254)
T cd05083 101 QLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD------NSKLPVKWTAPEALK 170 (254)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCC------CCCCCceecCHHHhc
Confidence 45778899999999999 89999999999999999999999999998865332211 122356799999753
No 305
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.55 E-value=8.8e-15 Score=79.18 Aligned_cols=74 Identities=26% Similarity=0.447 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+.++.+++.++.++| ..+++|+|+++.|++++..+.+++.|||.+.......... ....|+..|+|||.+.
T Consensus 101 ~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~ 174 (277)
T cd06917 101 KYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR---STFVGTPYWMAPEVIT 174 (277)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc---ccccCCcceeCHHHhc
Confidence 346778899999999999 8999999999999999999999999999887655433211 1346788999999753
No 306
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.55 E-value=3.9e-15 Score=89.07 Aligned_cols=75 Identities=23% Similarity=0.352 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCcccc--ccCccCcce
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIG--TLGFIAPEC 79 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pe~ 79 (82)
-|++.++.+|+.|++||- +.+.+|||+.+.|||++.+..+|++|||+++.+.+..... +....| +.+|+|||.
T Consensus 731 iQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~--ytt~GGKIPiRWTAPEA 805 (996)
T KOG0196|consen 731 IQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA--YTTLGGKIPIRWTAPEA 805 (996)
T ss_pred ehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc--ccccCCccceeecChhH
Confidence 478899999999999999 9999999999999999999999999999998765433111 112222 578999998
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
|.
T Consensus 806 Ia 807 (996)
T KOG0196|consen 806 IA 807 (996)
T ss_pred hh
Confidence 63
No 307
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.55 E-value=1.1e-14 Score=78.82 Aligned_cols=74 Identities=26% Similarity=0.408 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|++||.+.
T Consensus 98 ~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~~PE~~~ 171 (274)
T cd06609 98 TYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK---RNTFVGTPFWMAPEVIK 171 (274)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccccc---cccccCCccccChhhhc
Confidence 356778899999999999 899999999999999999999999999998765543221 11346788899999764
No 308
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.55 E-value=7.5e-15 Score=79.62 Aligned_cols=73 Identities=21% Similarity=0.377 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||++......... .....+++.|++||.+
T Consensus 100 ~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~~PE~~ 172 (284)
T cd07836 100 NTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT---FSNEVVTLWYRAPDVL 172 (284)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc---cccccccccccChHHh
Confidence 356778999999999999 889999999999999999999999999988654322111 1133567889999975
No 309
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.55 E-value=1e-14 Score=78.03 Aligned_cols=74 Identities=28% Similarity=0.475 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....++..|++||.+.
T Consensus 99 ~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~~PE~~~ 172 (256)
T cd06612 99 EEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK---RNTVIGTPFWMAPEVIQ 172 (256)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCccc---cccccCCccccCHHHHh
Confidence 356778899999999999 889999999999999999999999999988655433211 11345678899999764
No 310
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.55 E-value=8.3e-15 Score=79.70 Aligned_cols=73 Identities=26% Similarity=0.432 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.+++.++.|+|+ ..+++|+|+++.|++++.++.+++.|||++.......... ...|++.|+|||.+.
T Consensus 108 ~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~y~aPE~~~ 180 (288)
T cd06616 108 ILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKT----RDAGCRPYMAPERID 180 (288)
T ss_pred HHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccc----cccCccCccCHHHhc
Confidence 456788999999999993 2489999999999999999999999999886543322211 235688899999764
No 311
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.55 E-value=1.1e-14 Score=78.92 Aligned_cols=76 Identities=21% Similarity=0.315 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.|+.|+| +.+++|+|+++.|++++.+..+++.|||+++.......... .....++..|+|||.+.
T Consensus 117 ~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~-~~~~~~~~~y~apE~~~ 192 (280)
T cd05043 117 QQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCL-GDNENRPVKWMALESLV 192 (280)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEe-CCCCCcchhccCHHHHh
Confidence 356778899999999999 89999999999999999999999999999865433221111 11224466799999753
No 312
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.55 E-value=8.5e-15 Score=81.66 Aligned_cols=71 Identities=21% Similarity=0.355 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++....... ....+++.|++||.+.
T Consensus 118 ~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~ 188 (343)
T cd07880 118 DRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM------TGYVVTRWYRAPEVIL 188 (343)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccccccccCc------cccccCCcccCHHHHh
Confidence 356678899999999999 8999999999999999999999999999886433211 1335678899999753
No 313
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.55 E-value=1.4e-14 Score=86.72 Aligned_cols=71 Identities=25% Similarity=0.412 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcce
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 79 (82)
..+.++.|++.||.|+| .++++|+|++|+||+++.++.+++.|||+++......... ....+++.|++||.
T Consensus 105 ~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~---~~~~~t~~~~~pe~ 175 (669)
T cd05610 105 MAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNM---MDILTTPSMAKPKN 175 (669)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCcccc---cccccCccccCccc
Confidence 45778899999999999 8899999999999999999999999999987654332221 13466788888874
No 314
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.54 E-value=1.2e-14 Score=78.86 Aligned_cols=76 Identities=22% Similarity=0.349 Sum_probs=56.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC---ceEEeecceeeecCCCCccccCCCccccccCccCcc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN---VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 78 (82)
.+.+.++.|++.++.|+| +++++|+|++++|++++.++ .+++.|||++........... ......+..|+|||
T Consensus 116 ~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE 191 (277)
T cd05036 116 KDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRK-GGRAMLPIKWMPPE 191 (277)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEeccCccccccCCccceec-CCCCCccHhhCCHH
Confidence 356778999999999999 88999999999999998654 589999998865532221111 11223356799999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 192 ~~~ 194 (277)
T cd05036 192 AFL 194 (277)
T ss_pred HHh
Confidence 753
No 315
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.54 E-value=1.8e-14 Score=78.21 Aligned_cols=70 Identities=23% Similarity=0.454 Sum_probs=54.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-------ceEEeecceeeecCCCCccccCCCccccccCc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-------VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGF 74 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (82)
..++.++.|++.|+.|+| .++++|+|+++.|++++..+ .+++.|||++....... ...++..|
T Consensus 117 ~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~-------~~~~~~~~ 186 (274)
T cd05076 117 AWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE-------ERVERIPW 186 (274)
T ss_pred HHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccccc-------ccccCCcc
Confidence 456788999999999999 89999999999999997543 36899999764332111 22457789
Q ss_pred cCcceec
Q 040586 75 IAPECMT 81 (82)
Q Consensus 75 ~~pe~~~ 81 (82)
+|||.+.
T Consensus 187 ~aPe~~~ 193 (274)
T cd05076 187 IAPECVP 193 (274)
T ss_pred cCchhhc
Confidence 9999763
No 316
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.54 E-value=1.2e-14 Score=79.41 Aligned_cols=72 Identities=26% Similarity=0.500 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..++.|++.++.|+| . ++++|+|+++.|++++.++.+++.|||++.......... ...++..|+|||.+.
T Consensus 115 ~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~----~~~~~~~y~aPE~~~ 187 (296)
T cd06618 115 ILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT----RSAGCAAYMAPERID 187 (296)
T ss_pred HHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCccc----CCCCCccccCHhhcC
Confidence 45678999999999999 6 589999999999999999999999999886543322111 224677899999764
No 317
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.54 E-value=1.2e-14 Score=80.89 Aligned_cols=72 Identities=25% Similarity=0.407 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||++......... .....++..|+|||.+
T Consensus 109 ~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~ 180 (337)
T cd07858 109 HCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF---MTEYVVTRWYRAPELL 180 (337)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc---ccccccccCccChHHH
Confidence 45678899999999999 899999999999999999999999999988655432211 1134568899999975
No 318
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.54 E-value=1.6e-14 Score=77.02 Aligned_cols=70 Identities=24% Similarity=0.275 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| +++++|+|++|.|++++.++.+++.|||.+........ ...++..|++||.+.
T Consensus 86 ~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~------~~~~~~~y~aPE~~~ 155 (237)
T cd05576 86 CVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD------GEAVENMYCAPEVGG 155 (237)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccc------cCCcCccccCCcccC
Confidence 45678899999999999 89999999999999999999999999997654432211 223466799999763
No 319
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.54 E-value=1.7e-14 Score=77.73 Aligned_cols=76 Identities=21% Similarity=0.377 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-----ceEEeecceeeecCCCCccccCCCccccccCccC
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-----VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIA 76 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (82)
.+++.++.|++.++.|+| +.+++|+|+++.|++++.+. .+++.|||++........... .....++..|+|
T Consensus 106 ~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~a 181 (269)
T cd05044 106 KELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRK-EGEGLLPVRWMA 181 (269)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccccc-CcccCCCccccC
Confidence 456778899999999999 88999999999999999877 899999998865433222111 112244678999
Q ss_pred cceec
Q 040586 77 PECMT 81 (82)
Q Consensus 77 pe~~~ 81 (82)
||.+.
T Consensus 182 PE~~~ 186 (269)
T cd05044 182 PESLL 186 (269)
T ss_pred HHHHc
Confidence 99764
No 320
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.54 E-value=2.3e-14 Score=77.58 Aligned_cols=74 Identities=24% Similarity=0.335 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.|++.++.++| ..+++|+|+++.|++++.++.+++.|||.+......... .....++..|++||.+.
T Consensus 98 ~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~ 171 (283)
T cd05118 98 SLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP---YTHYVVTRWYRAPELLL 171 (283)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc---ccCccCcccccCcHHHh
Confidence 356778999999999999 899999999999999999999999999988766543311 11335678899999753
No 321
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.54 E-value=1.8e-14 Score=77.96 Aligned_cols=74 Identities=24% Similarity=0.367 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.+++.++.++| +.+++|+|+++.|++++.++.+++.|||.+......... .....++..|+|||.+.
T Consensus 98 ~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~aPE~~~ 171 (282)
T cd07829 98 NLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT---YTHEVVTLWYRAPEILL 171 (282)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc---cCccccCcCcCChHHhc
Confidence 356788999999999999 899999999999999999999999999988665432211 11234567899999753
No 322
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.54 E-value=2e-14 Score=78.12 Aligned_cols=71 Identities=23% Similarity=0.455 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.+++.++.|+| . .+++|+|+++.|++++.++.+++.|||.+........ ....+++.|++||.+.
T Consensus 103 ~~~~~~~~i~~~l~~LH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~ 174 (286)
T cd06622 103 VLRRITYAVVKGLKFLK---EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA-----KTNIGCQSYMAPERIK 174 (286)
T ss_pred HHHHHHHHHHHHHHHHH---hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc-----ccCCCccCccCcchhc
Confidence 56778899999999999 5 4899999999999999999999999998865432211 1335678899999763
No 323
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.54 E-value=1e-14 Score=78.30 Aligned_cols=75 Identities=25% Similarity=0.394 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.+++.++.|+| +++++|+|+++.|++++.++.+++.|||.+............ ...++..|+|||.+.
T Consensus 103 ~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~--~~~~~~~y~~PE~~~ 177 (261)
T cd05034 103 PQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE--GAKFPIKWTAPEAAN 177 (261)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh--ccCCCccccCHHHhc
Confidence 356778899999999999 899999999999999999999999999988665432211111 122356799999764
No 324
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.54 E-value=1e-14 Score=89.67 Aligned_cols=74 Identities=23% Similarity=0.397 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHHhhcCC----CCCeEeecCCCCCEEEccC-----------------CceEEeecceeeecCCCCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRF----SRPIVFRDIKPSTLLFQER-----------------NVAKFFNFSVSISIPEGKTH 61 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~----~~~~~h~~l~~~~~l~~~~-----------------~~~~l~~~~~~~~~~~~~~~ 61 (82)
..+.++.|++.||.|||... .++++|+||+|.||+++.. ..+++.|||++........
T Consensus 119 ~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~- 197 (1021)
T PTZ00266 119 AIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM- 197 (1021)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc-
Confidence 46778999999999999321 1459999999999999642 2479999999865433221
Q ss_pred ccCCCccccccCccCccee
Q 040586 62 VNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 62 ~~~~~~~~~~~~~~~pe~~ 80 (82)
.....|++.|+|||++
T Consensus 198 ---~~s~vGTp~YmAPEvL 213 (1021)
T PTZ00266 198 ---AHSCVGTPYYWSPELL 213 (1021)
T ss_pred ---ccccCCCccccCHHHH
Confidence 1134689999999986
No 325
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.53 E-value=1.2e-14 Score=78.83 Aligned_cols=73 Identities=27% Similarity=0.428 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++......... .....+++.|++||.+
T Consensus 103 ~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~~PE~~ 175 (280)
T cd06611 103 PQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK---RDTFIGTPYWMAPEVV 175 (280)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc---cceeecchhhcCHHHH
Confidence 356778999999999999 899999999999999999999999999987543322111 1134678899999975
No 326
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.53 E-value=1.8e-14 Score=77.60 Aligned_cols=76 Identities=25% Similarity=0.425 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccc---cCCCccccccCccCcce
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHV---NDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pe~ 79 (82)
....++.|++.++.++| +.+++|+|++|.|++++.++.+++.|||.+.......... .......|+..|+|||.
T Consensus 107 ~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~ 183 (267)
T cd06628 107 LVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEV 183 (267)
T ss_pred HHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhH
Confidence 45678899999999999 8999999999999999999999999999886654211111 11113357788999997
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 184 ~~ 185 (267)
T cd06628 184 VK 185 (267)
T ss_pred hc
Confidence 64
No 327
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.53 E-value=2.8e-14 Score=78.55 Aligned_cols=71 Identities=27% Similarity=0.534 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| + .+++|+|+++.|++++.++.+++.|||++........ ....++..|+|||.+.
T Consensus 100 ~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~aPE~~~ 171 (308)
T cd06615 100 ILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSPERLQ 171 (308)
T ss_pred HHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCccccccccc-----ccCCCCcCccChhHhc
Confidence 45678899999999999 6 5899999999999999999999999998754432211 1346788999999753
No 328
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.53 E-value=2.8e-14 Score=76.42 Aligned_cols=75 Identities=19% Similarity=0.354 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.+++.++.++| +.+++|+|+++.|++++.+..+++.|||.+.......... .....++..|+|||.+.
T Consensus 100 ~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~~aPe~~~ 174 (256)
T cd05112 100 ETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS--STGTKFPVKWSSPEVFS 174 (256)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcccc--cCCCccchhhcCHhHhc
Confidence 356778899999999999 8899999999999999999999999999886554322211 11223456899999764
No 329
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.53 E-value=2.2e-14 Score=78.47 Aligned_cols=74 Identities=20% Similarity=0.279 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.|++.++.|+| +.+++|+|++|+|++++.++.+++.|||.+........... .....+++.|++||..
T Consensus 131 ~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~ 204 (296)
T cd05095 131 TLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRI-QGRAVLPIRWMSWESI 204 (296)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceec-cCcCcCccccCCHHHH
Confidence 56788999999999999 89999999999999999999999999998865433221111 1122335678999853
No 330
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.53 E-value=2.6e-14 Score=78.93 Aligned_cols=69 Identities=26% Similarity=0.456 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.++..++.+++.++.|+| +.+++|+|+++.|++++.++.+++.|||++...... ....+++.|+|||.+
T Consensus 125 ~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~ 193 (317)
T cd06635 125 VEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-------NSFVGTPYWMAPEVI 193 (317)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc-------ccccCCccccChhhh
Confidence 356678899999999999 899999999999999999999999999987533211 133578889999976
No 331
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.53 E-value=3.6e-14 Score=76.53 Aligned_cols=72 Identities=29% Similarity=0.475 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-CCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.|++.++.|+| .++++|+|+++.|++++. ...+++.|||.+.......... ....+++.|+|||.+
T Consensus 109 ~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~aPE~~ 181 (268)
T cd06624 109 TIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT---ETFTGTLQYMAPEVI 181 (268)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc---ccCCCCccccChhhh
Confidence 35567889999999999 899999999999999976 6689999999886543222111 123568899999975
No 332
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.53 E-value=2.5e-14 Score=77.24 Aligned_cols=74 Identities=19% Similarity=0.288 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.++.|+| +++++|+|++|.|++++.+..+++.|||++........... .....+++.|++||.+
T Consensus 114 ~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~ 187 (273)
T cd05074 114 TLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQ-GCASKLPVKWLALESL 187 (273)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcccccccccCCcceec-CCCccCchhhcCHhHH
Confidence 45778999999999999 88999999999999999999999999998865433221111 1122345678899865
No 333
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.52 E-value=1.6e-14 Score=80.47 Aligned_cols=75 Identities=19% Similarity=0.316 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-CCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.|++.|+.|+| ..+++|+|+++.|++++. +..+++.|||.+.................++..|+|||.+
T Consensus 115 ~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 190 (342)
T cd07854 115 HARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLL 190 (342)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHH
Confidence 56678899999999999 899999999999999974 5578999999886653322111111123567889999965
No 334
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.52 E-value=2.6e-14 Score=76.64 Aligned_cols=71 Identities=24% Similarity=0.438 Sum_probs=57.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||.+........ ....+..|+|||.+.
T Consensus 102 ~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~------~~~~~~~~~ape~~~ 172 (256)
T cd05039 102 AQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD------SGKLPVKWTAPEALR 172 (256)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc------cCCCcccccCchhhc
Confidence 456788899999999999 99999999999999999999999999998865432211 123356799999764
No 335
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.52 E-value=1.9e-14 Score=77.12 Aligned_cols=73 Identities=23% Similarity=0.361 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.++.++| +++++|+|+++.|++++.+..+++.|||.+.......... ....|++.|+|||.+.
T Consensus 102 ~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~~~pe~~~ 174 (256)
T cd08218 102 QILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA---RTCIGTPYYLSPEICE 174 (256)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh---hhccCCccccCHHHhC
Confidence 56788999999999999 8999999999999999999999999999886554322111 1335778899999754
No 336
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.52 E-value=3.5e-14 Score=76.09 Aligned_cols=77 Identities=18% Similarity=0.369 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCC--CCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcce
Q 040586 2 KHRLKVAMEIANAVAYLHVRF--SRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~--~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 79 (82)
.+.+.++.|++.++.++|..+ +.+++|+|+++.|++++.++.+++.|||++.......... ....+++.|++||.
T Consensus 105 ~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~---~~~~~~~~~~~pE~ 181 (265)
T cd08217 105 EFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA---KTYVGTPYYMSPEQ 181 (265)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccc---cccccCCCccChhh
Confidence 356778899999999999554 6789999999999999999999999999886654332211 13467889999997
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 182 ~~ 183 (265)
T cd08217 182 LN 183 (265)
T ss_pred hc
Confidence 64
No 337
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.52 E-value=3e-14 Score=76.88 Aligned_cols=77 Identities=22% Similarity=0.298 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccc--cccCccCcce
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLI--GTLGFIAPEC 79 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pe~ 79 (82)
.+.+.++.|++.++.|+| ..+++|+|+++.|++++.+..+++.|||++................. .+..|++||.
T Consensus 106 ~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~ 182 (269)
T cd05065 106 IQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA 182 (269)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhH
Confidence 356788899999999999 89999999999999999999999999998765433222111111111 2356999997
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 183 ~~ 184 (269)
T cd05065 183 IA 184 (269)
T ss_pred hc
Confidence 64
No 338
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.52 E-value=2.7e-14 Score=76.71 Aligned_cols=69 Identities=33% Similarity=0.505 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.|||++...... ....++..|++||.+.
T Consensus 98 ~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-------~~~~~~~~y~~pe~~~ 166 (260)
T cd05611 98 WAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN-------KKFVGTPDYLAPETIL 166 (260)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceecccc-------ccCCCCcCccChhhhc
Confidence 46678899999999999 899999999999999999999999999987643321 1335678899999764
No 339
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.52 E-value=2.9e-14 Score=76.65 Aligned_cols=72 Identities=29% Similarity=0.510 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+........ .....++..|++||.+.
T Consensus 94 ~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~PE~~~ 165 (262)
T cd05572 94 TARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK----TWTFCGTPEYVAPEIIL 165 (262)
T ss_pred HHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc----cccccCCcCccChhHhc
Confidence 45667889999999999 89999999999999999999999999998866543321 11346788899999753
No 340
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.52 E-value=1.9e-14 Score=78.75 Aligned_cols=74 Identities=23% Similarity=0.463 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||++......... .....+++.|++||.+.
T Consensus 116 ~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~~pE~~~ 189 (292)
T cd06657 116 EQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKSLVGTPYWMAPELIS 189 (292)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccccc---ccccccCccccCHHHhc
Confidence 345678899999999999 889999999999999999999999999987654332211 11346788999999763
No 341
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.52 E-value=2.4e-14 Score=77.93 Aligned_cols=74 Identities=24% Similarity=0.367 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| ..+++|+|+++.|++++.++.+++.|||++.......... .....|+..|++||.+.
T Consensus 106 ~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~ 179 (288)
T cd05583 106 EVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEER--AYSFCGTIEYMAPEVIR 179 (288)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccccccccc--cccccCCccccCHHHhc
Confidence 45667889999999999 8999999999999999999999999999886544322111 11345788999999753
No 342
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.52 E-value=5.8e-14 Score=77.22 Aligned_cols=76 Identities=18% Similarity=0.332 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc----ccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH----VNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~pe 78 (82)
....++.|++.|+.|+| +.+++|+|+++.|++++.++.+++.+|+.+......... ........++..|+|||
T Consensus 102 ~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 178 (314)
T cd08216 102 AIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPE 178 (314)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHH
Confidence 34567899999999999 899999999999999999999999999977544321110 00111335677899999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 179 ~~~ 181 (314)
T cd08216 179 VLQ 181 (314)
T ss_pred Hhc
Confidence 763
No 343
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.52 E-value=2.9e-14 Score=78.53 Aligned_cols=50 Identities=32% Similarity=0.442 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
....++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||++...
T Consensus 104 ~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 104 VARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQS 153 (316)
T ss_pred HHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence 45667899999999999 899999999999999999999999999987543
No 344
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.52 E-value=4.2e-14 Score=76.67 Aligned_cols=73 Identities=27% Similarity=0.483 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++......... .....++..|+|||.+.
T Consensus 102 ~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~apE~~~ 174 (277)
T cd06640 102 QIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---RNTFVGTPFWMAPEVIQ 174 (277)
T ss_pred HHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc---cccccCcccccCHhHhc
Confidence 45677899999999999 899999999999999999999999999998665432211 11345678899999763
No 345
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.51 E-value=3.5e-14 Score=77.67 Aligned_cols=73 Identities=27% Similarity=0.466 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.......... ....+++.|++||.+.
T Consensus 116 ~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~---~~~~~~~~y~~PE~~~ 188 (293)
T cd06647 116 QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVT 188 (293)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc---ccccCChhhcCchhhc
Confidence 45678899999999999 8999999999999999999999999999876544322211 1346788899999763
No 346
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.51 E-value=3.1e-14 Score=77.52 Aligned_cols=75 Identities=25% Similarity=0.372 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.++.++| ..+++|+|+++.|++++.++.+++.|||.+........... ......+..|+|||.+.
T Consensus 131 ~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~ 205 (288)
T cd05050 131 EQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA-SENDAIPIRWMPPESIF 205 (288)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecccccHhheEecCCCceEECccccceecccCccccc-cCCCccChhhcCHHHHh
Confidence 45788999999999999 89999999999999999999999999998865433221111 11223356799999653
No 347
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.51 E-value=3.8e-14 Score=75.61 Aligned_cols=74 Identities=24% Similarity=0.456 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+..++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+......... .....++..|++||.+.
T Consensus 99 ~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~ 172 (254)
T cd06627 99 SLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD---DASVVGTPYWMAPEVIE 172 (254)
T ss_pred HHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc---ccccccchhhcCHhhhc
Confidence 345678899999999999 899999999999999999999999999988765543321 11345688899999753
No 348
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=3e-14 Score=82.88 Aligned_cols=72 Identities=29% Similarity=0.506 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEE-ccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLF-QERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
...++.||+.++.||| +.-++|||++|+|+++ ..-+.+|+.|||++..+..+.... ..+|++-|-|||++.+
T Consensus 120 a~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~----TsCGSLAYSAPEILLG 192 (864)
T KOG4717|consen 120 AKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT----TSCGSLAYSAPEILLG 192 (864)
T ss_pred HHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh----cccchhhccCchhhhc
Confidence 4578899999999999 8889999999999876 567889999999987665544332 5689999999998753
No 349
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.51 E-value=3.1e-14 Score=76.49 Aligned_cols=76 Identities=32% Similarity=0.503 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccc-cCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHV-NDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++.......... .......|+..|++||.+.
T Consensus 103 ~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~ 179 (267)
T cd06610 103 IIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179 (267)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHc
Confidence 45677899999999999 8999999999999999999999999999886554332211 1112346788999999753
No 350
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.50 E-value=6.4e-14 Score=77.29 Aligned_cols=69 Identities=26% Similarity=0.461 Sum_probs=57.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+++.++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||.+..... .....|+..|+|||.+
T Consensus 121 ~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-------~~~~~~~~~y~aPE~~ 189 (313)
T cd06633 121 VEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-------ANSFVGTPYWMAPEVI 189 (313)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-------CCCccccccccChhhc
Confidence 356678899999999999 89999999999999999999999999998743211 1134678899999986
No 351
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.50 E-value=6.7e-14 Score=74.80 Aligned_cols=75 Identities=25% Similarity=0.376 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+.++.+++.++.++| +++++|+|+++.|++++.++.+++.|||.+........... .....++..|+|||.+.
T Consensus 94 ~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~ 168 (251)
T cd05041 94 KLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS-DGLKQIPIKWTAPEALN 168 (251)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec-cccCcceeccCChHhhc
Confidence 45678889999999999 89999999999999999999999999998865432221111 01122355699999753
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.50 E-value=6.4e-14 Score=77.78 Aligned_cols=76 Identities=18% Similarity=0.316 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc-----------ccCCCccccc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH-----------VNDTDKLIGT 71 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 71 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+......... ........++
T Consensus 120 ~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (335)
T PTZ00024 120 QVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVT 196 (335)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccc
Confidence 46678899999999999 899999999999999999999999999988765421110 0111123457
Q ss_pred cCccCcceec
Q 040586 72 LGFIAPECMT 81 (82)
Q Consensus 72 ~~~~~pe~~~ 81 (82)
+.|+|||.+.
T Consensus 197 ~~y~aPE~~~ 206 (335)
T PTZ00024 197 LWYRAPELLM 206 (335)
T ss_pred cCCCCChhcc
Confidence 8899999764
No 353
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.50 E-value=3.8e-14 Score=76.31 Aligned_cols=76 Identities=28% Similarity=0.409 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCc---cccCCCccccccCccCcce
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKT---HVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~pe~ 79 (82)
....++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+........ .........++..|+|||.
T Consensus 103 ~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 179 (265)
T cd06631 103 VFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV 179 (265)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhh
Confidence 45667899999999999 88999999999999999999999999998765432111 1111123467889999997
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
+.
T Consensus 180 ~~ 181 (265)
T cd06631 180 IN 181 (265)
T ss_pred hc
Confidence 64
No 354
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.50 E-value=4.3e-14 Score=75.77 Aligned_cols=76 Identities=29% Similarity=0.445 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc-----ccCCCccccccCccCc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH-----VNDTDKLIGTLGFIAP 77 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~p 77 (82)
.+..++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++......... ........++..|++|
T Consensus 94 ~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 170 (265)
T cd05579 94 VARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAP 170 (265)
T ss_pred HHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCH
Confidence 56678999999999999 899999999999999999999999999987643322110 0011234567889999
Q ss_pred ceec
Q 040586 78 ECMT 81 (82)
Q Consensus 78 e~~~ 81 (82)
|...
T Consensus 171 e~~~ 174 (265)
T cd05579 171 EVIL 174 (265)
T ss_pred HHhc
Confidence 9653
No 355
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.50 E-value=6e-14 Score=76.08 Aligned_cols=74 Identities=27% Similarity=0.475 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.+++.++.++| ..+++|+|+++.|++++.++.+++.|||++.......... ....++..|++||.+.
T Consensus 101 ~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~y~~PE~~~ 174 (277)
T cd06641 101 TQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR---NTFVGTPFWMAPEVIK 174 (277)
T ss_pred HHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhh---ccccCCccccChhhhc
Confidence 356778899999999999 8999999999999999999999999999886554322111 1345688899999764
No 356
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.50 E-value=3.3e-14 Score=83.16 Aligned_cols=70 Identities=24% Similarity=0.455 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceecC
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 82 (82)
--+..|++.|+.+|| +.+++|||++-+|++++.++-+|+.|||.+....++. ...++||..|.|||++.+
T Consensus 673 k~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgp-----fd~f~gtv~~aapevl~g 742 (772)
T KOG1152|consen 673 KLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP-----FDVFVGTVDYAAPEVLGG 742 (772)
T ss_pred HHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeeccchhhhcCCC-----cceeeeeccccchhhhCC
Confidence 346799999999999 9999999999999999999999999999774332222 236799999999999864
No 357
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.50 E-value=5.5e-14 Score=82.19 Aligned_cols=70 Identities=27% Similarity=0.436 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEE-ccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLF-QERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++..|+.+++.++.||| .++++|||++|.||++ +..+.+++.+||.++....... ..+-|..|.|||++.
T Consensus 416 e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~------tp~~t~~y~APEvl~ 486 (612)
T KOG0603|consen 416 EASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD------TPALTLQYVAPEVLA 486 (612)
T ss_pred HHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhc------ccchhhcccChhhhc
Confidence 35578999999999999 9999999999999999 5888899999998866554411 224478899999864
No 358
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.50 E-value=5.2e-14 Score=75.12 Aligned_cols=73 Identities=27% Similarity=0.491 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.+++.++.++| +.+++|+|+++.|++++.++.+++.|||.+......... .....|++.|++||.+.
T Consensus 104 ~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~ 176 (258)
T cd08215 104 QILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL---AKTVVGTPYYLSPELCQ 176 (258)
T ss_pred HHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCcce---ecceeeeecccChhHhc
Confidence 56778899999999999 889999999999999999999999999988665443311 11346788899999653
No 359
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.50 E-value=5.4e-14 Score=74.74 Aligned_cols=73 Identities=29% Similarity=0.545 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.....++.|++.++.++| ..+++|+|+++.|++++.++.+++.|||.+........ .....++..|++||.+.
T Consensus 98 ~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~PE~~~ 170 (253)
T cd05122 98 SQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----RNTMVGTPYWMAPEVIN 170 (253)
T ss_pred HHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc----ccceecCCcccCHHHHc
Confidence 356678899999999999 89999999999999999999999999998865543321 11446788899999764
No 360
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.49 E-value=5.6e-14 Score=77.86 Aligned_cols=76 Identities=16% Similarity=0.244 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc----ccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH----VNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~pe 78 (82)
....++.|++.|+.|+| +++++|+|+++.|++++.++.+++.+|+........... ........++..|+|||
T Consensus 102 ~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 178 (327)
T cd08227 102 AIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPE 178 (327)
T ss_pred HHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChH
Confidence 45678899999999999 899999999999999999999999998754332211110 00011234567799999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 179 ~~~ 181 (327)
T cd08227 179 VLQ 181 (327)
T ss_pred Hhh
Confidence 764
No 361
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.49 E-value=3.7e-14 Score=76.90 Aligned_cols=72 Identities=28% Similarity=0.556 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+........ .....++..|++||.+.
T Consensus 96 ~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~y~~PE~~~ 167 (277)
T cd05577 96 RAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK----IKGRAGTPGYMAPEVLQ 167 (277)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc----cccccCCCCcCCHHHhc
Confidence 45677899999999999 89999999999999999999999999998765432111 11335678899999753
No 362
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.49 E-value=3.1e-14 Score=79.41 Aligned_cols=70 Identities=27% Similarity=0.440 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++...... .....++..|+|||.+
T Consensus 118 ~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~ 187 (343)
T cd07851 118 DHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------MTGYVATRWYRAPEIM 187 (343)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccccccccccc------ccCCcccccccCHHHH
Confidence 356778899999999999 899999999999999999999999999988654322 1133567889999975
No 363
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.49 E-value=2.5e-14 Score=83.82 Aligned_cols=74 Identities=22% Similarity=0.305 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
..++++.||++|+.||. +.+++|+|+.+.|++++.++.+|++|||+++.+-++.+...+. ..+-+++|||+|.|
T Consensus 638 ~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqg-r~vlpiRwmawEsi 711 (807)
T KOG1094|consen 638 PGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQG-RAVLPIRWMAWESI 711 (807)
T ss_pred hhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceeeec-ceeeeeeehhHHHH
Confidence 35779999999999999 9999999999999999999999999999998776655543322 33557899999976
No 364
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.49 E-value=1.1e-13 Score=74.74 Aligned_cols=72 Identities=21% Similarity=0.451 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+++.++.|++.++.++| . .+++|+|+++.|++++.++.+++.|||.+........ .....++..|++||.+.
T Consensus 114 ~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~Pe~~~ 186 (269)
T cd08528 114 RIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK----LTSVVGTILYSCPEIVK 186 (269)
T ss_pred HHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEecccceeecccccc----cccccCcccCcChhhhc
Confidence 46778899999999999 5 5799999999999999999999999999866443321 12346788899999764
No 365
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=1.4e-13 Score=79.15 Aligned_cols=77 Identities=27% Similarity=0.487 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc---CCceEEeecceeeecCCCCcc----ccCCCccccccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE---RNVAKFFNFSVSISIPEGKTH----VNDTDKLIGTLGFI 75 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~---~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 75 (82)
++..++.||+.+|.||... +.++||-|++|.||++.. .+.+|+.|||++......... -...+...||.||+
T Consensus 569 EARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYL 647 (775)
T KOG1151|consen 569 EARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYL 647 (775)
T ss_pred HHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeec
Confidence 5678899999999999965 778999999999999964 457899999999876543222 11234668999999
Q ss_pred Cccee
Q 040586 76 APECM 80 (82)
Q Consensus 76 ~pe~~ 80 (82)
+||.+
T Consensus 648 PPEcF 652 (775)
T KOG1151|consen 648 PPECF 652 (775)
T ss_pred Cccee
Confidence 99976
No 366
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.49 E-value=5.8e-15 Score=79.73 Aligned_cols=65 Identities=25% Similarity=0.453 Sum_probs=50.9
Q ss_pred HHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 11 IANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 11 i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
++.||.||-. ...+||||++|+||+++..+.+|++|||.+..+..+.... .-.|...|||||-+.
T Consensus 176 tV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT----~daGCrpYmAPERi~ 240 (361)
T KOG1006|consen 176 TVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT----VDAGCRPYMAPERID 240 (361)
T ss_pred ehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh----hccCCccccChhccC
Confidence 3568888874 5589999999999999999999999999886554433222 236788999999764
No 367
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.49 E-value=6.8e-14 Score=75.08 Aligned_cols=73 Identities=30% Similarity=0.566 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| + .+++|+|+++.|++++.++.+++.|||.+.......... ....++..|+|||.+.
T Consensus 100 ~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~~pE~~~ 173 (264)
T cd06623 100 VLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC---NTFVGTVTYMSPERIQ 173 (264)
T ss_pred HHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc---cceeecccccCHhhhC
Confidence 46788999999999999 8 999999999999999999999999999886654332221 1335678899999754
No 368
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.49 E-value=5.4e-14 Score=75.24 Aligned_cols=71 Identities=27% Similarity=0.387 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++........ .....++..|++||.+
T Consensus 103 ~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~----~~~~~~~~~y~~pe~~ 173 (258)
T cd06632 103 VIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF----AKSFKGSPYWMAPEVI 173 (258)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecccccc----ccccCCCcceeCHHHh
Confidence 45677899999999999 89999999999999999999999999998865443221 1134578889999965
No 369
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.49 E-value=1.1e-13 Score=74.76 Aligned_cols=75 Identities=24% Similarity=0.410 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| +++++|+|+++.|++++.++.+++.|||++......... .......++..|++||.+.
T Consensus 109 ~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~ 183 (272)
T cd06629 109 LVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDN-DQNMSMQGSVFWMAPEVIH 183 (272)
T ss_pred HHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccccccccccccc-cccccccCCccccCHHHhc
Confidence 45567899999999999 899999999999999999999999999988653321111 1111345788899999753
No 370
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.48 E-value=2e-13 Score=77.05 Aligned_cols=47 Identities=34% Similarity=0.523 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++.+++.||+||| -.++++||+||+||++..++.+.++||.++.
T Consensus 181 aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~ 227 (459)
T KOG0610|consen 181 ARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSL 227 (459)
T ss_pred HHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccc
Confidence 4567899999999999 9999999999999999999999999997764
No 371
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.48 E-value=9.7e-14 Score=74.25 Aligned_cols=72 Identities=25% Similarity=0.407 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..++.+++.++.++| +++++|+|+++.|++++.+ ..+++.|||.+.......... ...++..|+|||.+.
T Consensus 102 ~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~ 174 (256)
T cd08220 102 TILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY----TVVGTPCYISPELCE 174 (256)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc----ccccCCcccCchhcc
Confidence 45678899999999999 8999999999999999854 457999999887654332211 346788999999764
No 372
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.48 E-value=6.2e-14 Score=77.15 Aligned_cols=68 Identities=26% Similarity=0.476 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
++..++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||++....... ...+++.|+|||.+
T Consensus 116 ~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~y~aPE~~ 183 (308)
T cd06634 116 EIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-------XFVGTPYWMAPEVI 183 (308)
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc-------cccCCccccCHHHH
Confidence 45677899999999999 8899999999999999999999999999876543211 33567889999975
No 373
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.48 E-value=7.4e-14 Score=82.61 Aligned_cols=72 Identities=24% Similarity=0.444 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC----ceEEeecceeeecCCCCccccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN----VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 78 (82)
+.+.+...+..|+.||| .++++|||+||.||++..+. ..|+.|||.|+...+.... ..++||.-|.+||
T Consensus 121 e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~----~S~vGT~~YLhPe 193 (732)
T KOG4250|consen 121 EFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLF----TSLVGTEEYLHPE 193 (732)
T ss_pred HHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCee----eeecCchhhcChH
Confidence 45777888999999999 99999999999999995433 4589999999877655532 2679999999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
+..
T Consensus 194 l~E 196 (732)
T KOG4250|consen 194 LYE 196 (732)
T ss_pred HHh
Confidence 753
No 374
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.48 E-value=9.1e-14 Score=75.64 Aligned_cols=74 Identities=26% Similarity=0.512 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.+++.++.++| +.+++|+|+++.|++++.++.+++.|||.+......... .....++..|++||.+.
T Consensus 116 ~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~ 189 (286)
T cd06614 116 PQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK---RNSVVGTPYWMAPEVIK 189 (286)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh---hccccCCcccCCHhHhc
Confidence 356778999999999999 899999999999999999999999999987543322111 11335678899999754
No 375
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.47 E-value=9.5e-14 Score=75.05 Aligned_cols=77 Identities=27% Similarity=0.451 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc-----------------ccC
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH-----------------VND 64 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~-----------------~~~ 64 (82)
.+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||++......... ...
T Consensus 102 ~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (280)
T cd05581 102 KCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRR 178 (280)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccc
Confidence 467788999999999999 899999999999999999999999999988765432211 011
Q ss_pred CCccccccCccCcceec
Q 040586 65 TDKLIGTLGFIAPECMT 81 (82)
Q Consensus 65 ~~~~~~~~~~~~pe~~~ 81 (82)
.....++..|++||...
T Consensus 179 ~~~~~~~~~~~~Pe~~~ 195 (280)
T cd05581 179 FASFVGTAEYVSPELLN 195 (280)
T ss_pred cccccCCccccCHHHhC
Confidence 22345678899999653
No 376
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.47 E-value=1.4e-13 Score=75.62 Aligned_cols=76 Identities=30% Similarity=0.328 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc------------ccCCCcccc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH------------VNDTDKLIG 70 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~~~~~~ 70 (82)
....++.|++.|+.|+| +.+++|+|++|.|++++..+.+++.|||++......... ........+
T Consensus 102 ~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (305)
T cd05609 102 MARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCG 178 (305)
T ss_pred HHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCcc
Confidence 35667889999999999 899999999999999999999999999987532110000 000012356
Q ss_pred ccCccCcceec
Q 040586 71 TLGFIAPECMT 81 (82)
Q Consensus 71 ~~~~~~pe~~~ 81 (82)
+..|+|||.+.
T Consensus 179 ~~~y~aPE~~~ 189 (305)
T cd05609 179 TPEYIAPEVIL 189 (305)
T ss_pred CccccCchhcc
Confidence 78899999763
No 377
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.47 E-value=9.3e-14 Score=74.81 Aligned_cols=76 Identities=24% Similarity=0.472 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-ceEEeecceeeecCCCCcccc-CCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-VAKFFNFSVSISIPEGKTHVN-DTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~ 80 (82)
....++.|++.|+.++| +++++|+|+++.|++++.++ .++++|||.+........... ......++..|+|||.+
T Consensus 104 ~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~ 180 (268)
T cd06630 104 VIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVL 180 (268)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHh
Confidence 45678899999999999 89999999999999998765 689999998866543321111 11234678899999976
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 181 ~ 181 (268)
T cd06630 181 R 181 (268)
T ss_pred c
Confidence 4
No 378
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.47 E-value=9.4e-14 Score=74.54 Aligned_cols=72 Identities=31% Similarity=0.526 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.|++.++.|+| +++++|+|+++.|++++.++.+++.|||.+......... ....|+..|++||.+.
T Consensus 101 ~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~ 172 (258)
T cd05578 101 QVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT----TSTSGTPGYMAPEVLC 172 (258)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccc----cccCCChhhcCHHHHc
Confidence 45678899999999999 899999999999999999999999999987654433211 1345678899999764
No 379
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.47 E-value=2.5e-13 Score=72.48 Aligned_cols=74 Identities=30% Similarity=0.524 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+...++.|++.++.++| +.+++|+|+++.|++++.++.+++.|||.+......... .....++..|++||.+.
T Consensus 93 ~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~Pe~~~ 166 (250)
T cd05123 93 ERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR---TNTFCGTPEYLAPEVLL 166 (250)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCc---ccCCcCCccccChHHhC
Confidence 356678899999999999 899999999999999999999999999988654432211 11345678899999753
No 380
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.47 E-value=2.7e-13 Score=75.84 Aligned_cols=72 Identities=24% Similarity=0.434 Sum_probs=56.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc--------------------CCceEEeecceeeecCCCCcc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE--------------------RNVAKFFNFSVSISIPEGKTH 61 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~--------------------~~~~~l~~~~~~~~~~~~~~~ 61 (82)
++...++.|++.++.+|| +.+++|.|++|+||++.+ +..+++.|||.+........
T Consensus 192 ~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs- 267 (415)
T KOG0671|consen 192 DHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHS- 267 (415)
T ss_pred HHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcc-
Confidence 356778999999999999 999999999999999852 22457888988865544432
Q ss_pred ccCCCccccccCccCcceecC
Q 040586 62 VNDTDKLIGTLGFIAPECMTT 82 (82)
Q Consensus 62 ~~~~~~~~~~~~~~~pe~~~~ 82 (82)
..+.|.-|+|||++.+
T Consensus 268 -----~iVsTRHYRAPEViLg 283 (415)
T KOG0671|consen 268 -----TIVSTRHYRAPEVILG 283 (415)
T ss_pred -----eeeeccccCCchheec
Confidence 4567889999998853
No 381
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.46 E-value=1.7e-13 Score=76.10 Aligned_cols=69 Identities=28% Similarity=0.371 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...++.|++.++.++| ..+++|+|+++.|++++.++.+++.|||.+....... ....++..|++||.+.
T Consensus 110 ~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~ 178 (328)
T cd07856 110 IQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM------TGYVSTRYYRAPEIML 178 (328)
T ss_pred HHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc------CCCcccccccCceeee
Confidence 4567899999999999 8999999999999999999999999999875432111 1335678899999753
No 382
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.46 E-value=5.3e-14 Score=75.63 Aligned_cols=71 Identities=31% Similarity=0.562 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.++| + .+++|+|+++.|++++.++.+++.|||.+......... ...++..|++||.+.
T Consensus 101 ~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~-----~~~~~~~y~~PE~~~ 172 (265)
T cd06605 101 ILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK-----TFVGTSSYMAPERIQ 172 (265)
T ss_pred HHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh-----cccCChhccCHHHHc
Confidence 34578899999999999 7 89999999999999999999999999987543221111 245678899999764
No 383
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.45 E-value=1.7e-13 Score=73.24 Aligned_cols=71 Identities=21% Similarity=0.425 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+...++.+++.|+.++| +.+++|+|+++.|++++.+..+++.|||++........ ....+++.|++||.+.
T Consensus 104 ~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~Pe~~~ 174 (256)
T cd08530 104 EIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA-----KTQIGTPHYMAPEVWK 174 (256)
T ss_pred HHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCc-----ccccCCccccCHHHHC
Confidence 45678899999999999 89999999999999999999999999998865543311 1235678899999753
No 384
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.44 E-value=6.4e-14 Score=83.14 Aligned_cols=72 Identities=24% Similarity=0.390 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
++.++.||.+++.||. ++.+||||+...|+++..+..+|++|||+++......+..-.... -++.|+|||.+
T Consensus 367 LlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAK--FPIKWTAPEsL 438 (1157)
T KOG4278|consen 367 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAK--FPIKWTAPESL 438 (1157)
T ss_pred HHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCcc--CcccccCcccc
Confidence 5678899999999999 999999999999999999999999999999876654433221112 26789999976
No 385
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.44 E-value=2.5e-13 Score=74.02 Aligned_cols=71 Identities=34% Similarity=0.537 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.|++.++.|+| ..+++|+|+++.|++++.++.+++.|||++........ ....++..|++||.+.
T Consensus 106 ~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~y~~pE~~~ 176 (287)
T cd06621 106 VLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA-----GTFTGTSFYMAPERIQ 176 (287)
T ss_pred HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccccccccc-----ccccCCccccCHHHhc
Confidence 35578899999999999 89999999999999999999999999998754332211 1234678899999753
No 386
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.43 E-value=3.2e-13 Score=72.59 Aligned_cols=71 Identities=24% Similarity=0.417 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+.+.++.|++.++.++| +.+++|+|+++.|++++. ..+++.|||++.......... ....+++.|++||.+
T Consensus 107 ~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~---~~~~~~~~~~~pe~~ 177 (260)
T cd08222 107 QVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLA---TTFTGTPYYMSPEAL 177 (260)
T ss_pred HHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecCCCcccc---cCCCCCcCccCHHHH
Confidence 45678899999999999 899999999999999976 458999999886553322211 134567889999965
No 387
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.43 E-value=3.1e-13 Score=72.06 Aligned_cols=76 Identities=32% Similarity=0.423 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.++..++.+++.++.|+| +.+++|+|+++.|++++.++.+++.|||.+.......... ......++..|++||.+.
T Consensus 101 ~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~ 176 (260)
T cd06606 101 PVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE-GTGSVRGTPYWMAPEVIR 176 (260)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccc-cccCCCCCccccCHhhhc
Confidence 456788999999999999 8999999999999999999999999999887665443210 011345678899999764
No 388
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.43 E-value=1.8e-13 Score=73.27 Aligned_cols=74 Identities=23% Similarity=0.399 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-ceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-VAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
..++.++.|++.++.|+| ..+++|+|+++.|++++.+. .+++.|||.+.......... ....|++.|+|||.+
T Consensus 101 ~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~~ape~~ 174 (257)
T cd08225 101 DQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA---YTCVGTPYYLSPEIC 174 (257)
T ss_pred HHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc---cccCCCccccCHHHH
Confidence 356788899999999999 88999999999999998875 46999999876544322111 133578889999975
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 175 ~ 175 (257)
T cd08225 175 Q 175 (257)
T ss_pred c
Confidence 3
No 389
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.42 E-value=3.1e-13 Score=72.37 Aligned_cols=78 Identities=21% Similarity=0.355 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccc------cCCCccccccCccC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHV------NDTDKLIGTLGFIA 76 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 76 (82)
+.+.++.++++|+.++|.. ..+..|+|++|.|+++++.+.+.+.|||.+.......... .+-.....|..|+|
T Consensus 128 ~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRA 206 (302)
T KOG2345|consen 128 QILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRA 206 (302)
T ss_pred HHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccC
Confidence 5678899999999999933 2249999999999999999999999999775433211110 01112245889999
Q ss_pred cceec
Q 040586 77 PECMT 81 (82)
Q Consensus 77 pe~~~ 81 (82)
||++.
T Consensus 207 PELf~ 211 (302)
T KOG2345|consen 207 PELFN 211 (302)
T ss_pred chhee
Confidence 99874
No 390
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.42 E-value=5.3e-13 Score=82.31 Aligned_cols=73 Identities=23% Similarity=0.413 Sum_probs=55.6
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 1 MKHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 1 ~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
|.++..++.|++.|+.|+|+.++.+++|+|+++.|++++.+...++. ++....... .....+++.|+|||++
T Consensus 779 ~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-------~~~~~~t~~y~aPE~~ 850 (968)
T PLN00113 779 WERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-------DTKCFISSAYVAPETR 850 (968)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-------CCCccccccccCcccc
Confidence 46788899999999999997767799999999999999988777664 443322111 1123568899999986
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 851 ~ 851 (968)
T PLN00113 851 E 851 (968)
T ss_pred c
Confidence 4
No 391
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.42 E-value=2.2e-13 Score=74.14 Aligned_cols=72 Identities=31% Similarity=0.505 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
....++.+++.++.|+|+ ..+++|+|+++.|++++.++.+++.|||++........ ....|+..|+|||.+.
T Consensus 104 ~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~-----~~~~~~~~~~aPE~~~ 175 (284)
T cd06620 104 ILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA-----DTFVGTSTYMSPERIQ 175 (284)
T ss_pred HHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc-----CccccCcccCCHHHHc
Confidence 456788999999999993 25799999999999999999999999998754322111 1346788999999753
No 392
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.41 E-value=7.8e-13 Score=67.65 Aligned_cols=61 Identities=18% Similarity=0.176 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.++.|++.|+.|+| +.+ ++.|++++.++.+++ ||.+...... ...|++.|+|||.+.
T Consensus 17 ~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~--------~~~g~~~y~aPE~~~ 77 (176)
T smart00750 17 EEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE--------QSRVDPYFMAPEVIQ 77 (176)
T ss_pred HHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc--------cCCCcccccChHHhc
Confidence 467889999999999999 555 999999999999988 8887654321 125789999999874
No 393
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.40 E-value=6.4e-13 Score=73.72 Aligned_cols=76 Identities=17% Similarity=0.249 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc----ccCCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH----VNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~pe 78 (82)
....++.|++.||.|+| +++++|+|+++.|++++.++.+++.+|+........... ........++..|++||
T Consensus 102 ~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 178 (328)
T cd08226 102 LIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPE 178 (328)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChh
Confidence 34578899999999999 899999999999999999999999998744222111000 00011123456799999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 179 ~~~ 181 (328)
T cd08226 179 LLR 181 (328)
T ss_pred hhc
Confidence 864
No 394
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.37 E-value=1.4e-12 Score=72.40 Aligned_cols=75 Identities=28% Similarity=0.505 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC---ceEEeecceeeecCCCCcc----ccCCCccccccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN---VAKFFNFSVSISIPEGKTH----VNDTDKLIGTLGFI 75 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~---~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 75 (82)
+.-.+..+|++||.|+| ++++.|||++|+||+-.... .+|++||.++......... ..+....+|+.-||
T Consensus 177 EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfM 253 (463)
T KOG0607|consen 177 EASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFM 253 (463)
T ss_pred HHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhc
Confidence 34567789999999999 99999999999999986543 5699999877543221111 11223557888999
Q ss_pred Cccee
Q 040586 76 APECM 80 (82)
Q Consensus 76 ~pe~~ 80 (82)
|||+.
T Consensus 254 APEVV 258 (463)
T KOG0607|consen 254 APEVV 258 (463)
T ss_pred chhHH
Confidence 99975
No 395
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.36 E-value=1.6e-12 Score=75.75 Aligned_cols=72 Identities=22% Similarity=0.290 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+..|+.|+..+|..|- ..+++|.|++|.|||+... ..+|++|||.|......... .+..+.+|.|||+|.
T Consensus 537 aVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit-----PYLVSRFYRaPEIiL 608 (752)
T KOG0670|consen 537 AVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEIT-----PYLVSRFYRAPEIIL 608 (752)
T ss_pred HHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCcccccccccccc-----HHHHHHhccCcceee
Confidence 46678999999999999 9999999999999999765 46799999998765543322 345567899999985
Q ss_pred C
Q 040586 82 T 82 (82)
Q Consensus 82 ~ 82 (82)
+
T Consensus 609 G 609 (752)
T KOG0670|consen 609 G 609 (752)
T ss_pred c
Confidence 4
No 396
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.36 E-value=7.3e-13 Score=79.26 Aligned_cols=76 Identities=25% Similarity=0.378 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+-+|+.||+.|+.||. .+++||||+...|+++.+...+|++|||+.+.++............-.++-|-|||.|+
T Consensus 213 ~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLr 288 (1039)
T KOG0199|consen 213 RLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLR 288 (1039)
T ss_pred HHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhc
Confidence 45678999999999999 99999999999999999999999999999988765433322211222345678999775
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.35 E-value=1.1e-12 Score=71.34 Aligned_cols=47 Identities=26% Similarity=0.520 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEc--cCCceEEeecceeeec
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQ--ERNVAKFFNFSVSISI 55 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~--~~~~~~l~~~~~~~~~ 55 (82)
.++.|+++++.|+| +++++|||++.+||++- +..++|++|||.....
T Consensus 125 ~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 125 KVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred HHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 46789999999999 99999999999999994 3458999999987543
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.35 E-value=1.7e-12 Score=69.30 Aligned_cols=70 Identities=21% Similarity=0.352 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.-++.|++.|+.||| +.+++|||++|.|++++.. ...++.|+|++.+........ -.+.+.+|-.||++.
T Consensus 135 ryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn----VRVASRyfKGPELLV 205 (338)
T KOG0668|consen 135 RYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN----VRVASRYFKGPELLV 205 (338)
T ss_pred HHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceee----eeeehhhcCCchhee
Confidence 456789999999999 9999999999999999854 578999999998776544332 234566788899874
No 399
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=3.9e-12 Score=75.61 Aligned_cols=75 Identities=24% Similarity=0.414 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc-ccCCCccccccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH-VNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~ 81 (82)
+-.+..|+..|+.|+| ..++-|+|++++|+++..++.+|+.|||.+..+..+... .......+|+..|+|||.+.
T Consensus 422 ~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~ 497 (601)
T KOG0590|consen 422 ADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLT 497 (601)
T ss_pred hhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccccc
Confidence 4456799999999999 999999999999999999999999999998765533222 12223568899999999875
No 400
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.32 E-value=5.8e-12 Score=65.56 Aligned_cols=51 Identities=10% Similarity=0.216 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecCC
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPE 57 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~ 57 (82)
+...++.|++.++.++| . .+++|+|++|.|++++ ++.+++.|||++.....
T Consensus 118 ~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 118 EAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred HHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 45678899999999999 7 8999999999999998 78899999999876544
No 401
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.32 E-value=6.3e-12 Score=70.01 Aligned_cols=73 Identities=25% Similarity=0.507 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-----CceEEeecceeeecCCCCcc----ccCCCcccccc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-----NVAKFFNFSVSISIPEGKTH----VNDTDKLIGTL 72 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-----~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (82)
+++..++.|++..++++| .+.+|.||++|+|++++.. ..+.+.|||+++.+.++.+. ..+.....||.
T Consensus 124 KTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTA 200 (449)
T KOG1165|consen 124 KTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTA 200 (449)
T ss_pred HhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccce
Confidence 456778899999999999 9999999999999999753 35789999999987765443 24556778999
Q ss_pred CccCc
Q 040586 73 GFIAP 77 (82)
Q Consensus 73 ~~~~p 77 (82)
+||+-
T Consensus 201 RYMSI 205 (449)
T KOG1165|consen 201 RYMSI 205 (449)
T ss_pred eeeEe
Confidence 99863
No 402
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.32 E-value=3.4e-12 Score=67.41 Aligned_cols=72 Identities=31% Similarity=0.546 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.++..++.+++.++.++| +.+++|+|+++.|++++.++.+++.|||.+........ .....++..|++||..
T Consensus 87 ~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~pE~~ 158 (244)
T smart00220 87 DEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL----LTTFVGTPEYMAPEVL 158 (244)
T ss_pred HHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccc----cccccCCcCCCCHHHH
Confidence 356778899999999999 88999999999999999999999999998876544321 1134567889999965
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.32 E-value=1.2e-12 Score=77.69 Aligned_cols=68 Identities=32% Similarity=0.486 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcce
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 79 (82)
.++.+.+.|+.|+| ..+-+|||++-.|+++++.+.+|+.|||.+....... .....+.||++|||||+
T Consensus 116 yvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati---~KrksfiGtpywmapEv 183 (829)
T KOG0576|consen 116 YVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI---AKRKSFIGTPYWMAPEV 183 (829)
T ss_pred HHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhhh---hhhhcccCCccccchhH
Confidence 34678889999999 8899999999999999999999999999885544222 22336799999999995
No 404
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.29 E-value=2.6e-12 Score=78.03 Aligned_cols=76 Identities=18% Similarity=0.310 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.++.|+.||++||.||| .++++|||+.+.|+++.+...+|+.|||++............. ..-..+.|||-|.++
T Consensus 798 q~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~-~gK~pikwmale~i~ 873 (1177)
T KOG1025|consen 798 QDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP-GGKVPIKWMALESIR 873 (1177)
T ss_pred HHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc-ccccCcHHHHHHHhh
Confidence 357889999999999999 9999999999999999999999999999998765443332211 111256788877653
No 405
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.28 E-value=8.7e-12 Score=65.02 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHh-hcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 3 HRLKVAMEIANAVAYL-HVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~l-h~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
+...++.|++.++.++ | ..+++|+|++|.|++++. +.+++.|||++...
T Consensus 118 ~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~~-~~v~LiDFG~a~~~ 167 (190)
T cd05147 118 KARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYHD-GKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEEC-CcEEEEEccccccC
Confidence 4667889999999999 7 789999999999999984 67999999998543
No 406
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.26 E-value=2.1e-11 Score=63.02 Aligned_cols=74 Identities=28% Similarity=0.584 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-CCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
.++..++.+++.++.++| ..+++|+|+++.|++++. ...+++.||+.+......... .....+...|++||.+
T Consensus 92 ~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~pe~~ 165 (215)
T cd00180 92 DEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSL---LKTIVGTPAYMAPEVL 165 (215)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcch---hhcccCCCCccChhHh
Confidence 356778899999999999 889999999999999999 889999999988665443211 1123456788999865
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 166 ~ 166 (215)
T cd00180 166 L 166 (215)
T ss_pred c
Confidence 3
No 407
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.25 E-value=2.1e-11 Score=66.24 Aligned_cols=76 Identities=32% Similarity=0.605 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-ceEEeecceeeecCCCCcccc---CCCccccccCccCcc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-VAKFFNFSVSISIPEGKTHVN---DTDKLIGTLGFIAPE 78 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pe 78 (82)
....+..|++.++.++| ..+++|+|++|+|++++... .+++.|||.+........... ......|+..|++||
T Consensus 102 ~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe 178 (384)
T COG0515 102 EALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE 178 (384)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHH
Confidence 45677899999999999 88999999999999999988 799999999875543332211 123567899999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
.+.
T Consensus 179 ~~~ 181 (384)
T COG0515 179 VLL 181 (384)
T ss_pred Hhc
Confidence 764
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.22 E-value=3.4e-11 Score=63.18 Aligned_cols=73 Identities=29% Similarity=0.399 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
+...++.+++.++.++| +.+++|+|+++.|++++.+..+++.|||.+......... ......++..|++||.+
T Consensus 99 ~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~~pe~~ 171 (225)
T smart00221 99 EARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA--LLKTVKGTPFYLAPEVL 171 (225)
T ss_pred HHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc--cccceeccCCcCCHhHh
Confidence 46678899999999999 889999999999999999999999999988766543210 11234567789999975
No 409
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.22 E-value=1.5e-11 Score=69.81 Aligned_cols=74 Identities=18% Similarity=0.301 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc-ccCCCccccccCccCcceec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH-VNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~ 81 (82)
+.+.++.|++.|+.|+| +.+++|.|+.+.|+++++...+|+.|-++++.+-...+. ... ..--+..||+||.+.
T Consensus 397 qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGD--nEnRPvkWMslEal~ 471 (563)
T KOG1024|consen 397 QLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGD--NENRPVKWMSLEALQ 471 (563)
T ss_pred HHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccchhccccCcccccccCC--CCCCcccccCHHHHh
Confidence 57788999999999999 999999999999999999999999999998764332221 111 112267899999764
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.21 E-value=3.3e-11 Score=67.10 Aligned_cols=74 Identities=23% Similarity=0.388 Sum_probs=56.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-----CceEEeecceeeecC--CCCc---cccC--CCccc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-----NVAKFFNFSVSISIP--EGKT---HVND--TDKLI 69 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-----~~~~l~~~~~~~~~~--~~~~---~~~~--~~~~~ 69 (82)
.+.+.++.|++.+|.++| +.+.+|||++|.|+.++.. ..+.+.|||+++.+. .... ...+ .....
T Consensus 122 ~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~r 198 (322)
T KOG1164|consen 122 KTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFR 198 (322)
T ss_pred hHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCC
Confidence 357889999999999999 9999999999999999865 468999999998332 2111 1111 12456
Q ss_pred cccCccCcc
Q 040586 70 GTLGFIAPE 78 (82)
Q Consensus 70 ~~~~~~~pe 78 (82)
||..|.++.
T Consensus 199 GT~ry~S~~ 207 (322)
T KOG1164|consen 199 GTLRYASIN 207 (322)
T ss_pred CccccccHH
Confidence 899998875
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.20 E-value=5.4e-11 Score=64.07 Aligned_cols=72 Identities=25% Similarity=0.432 Sum_probs=56.1
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC---CceEEeecceeeecCCCCcc----ccCCCccccccCc
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER---NVAKFFNFSVSISIPEGKTH----VNDTDKLIGTLGF 74 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~---~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 74 (82)
++.+-++.|++..++|+| .++.+|||++|+|++..-+ ..+.+.|||+++.+.+.... ..+.....||..|
T Consensus 111 kTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRY 187 (341)
T KOG1163|consen 111 KTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARY 187 (341)
T ss_pred HhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeee
Confidence 456777899999999999 9999999999999999754 35689999999877653322 2344466788888
Q ss_pred cC
Q 040586 75 IA 76 (82)
Q Consensus 75 ~~ 76 (82)
.+
T Consensus 188 AS 189 (341)
T KOG1163|consen 188 AS 189 (341)
T ss_pred hh
Confidence 65
No 412
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.17 E-value=9.1e-11 Score=62.05 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecC-CCCCEEEccCCceEEeecceeeecC
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDI-KPSTLLFQERNVAKFFNFSVSISIP 56 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l-~~~~~l~~~~~~~~l~~~~~~~~~~ 56 (82)
..+..|+..++.++| ..+++|+|+ ++.|++++.++.+++.|||++....
T Consensus 94 ~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 94 LAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred HHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 346788899999999 999999999 7899999999999999999997543
No 413
>smart00090 RIO RIO-like kinase.
Probab=99.13 E-value=1.9e-10 Score=61.84 Aligned_cols=50 Identities=14% Similarity=0.234 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCC-eEeecCCCCCEEEccCCceEEeecceeeecCC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRP-IVFRDIKPSTLLFQERNVAKFFNFSVSISIPE 57 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~-~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~ 57 (82)
...++.|++.++.++| ..+ ++|+|++|.|++++ .+.+++.|||.+.....
T Consensus 150 ~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 150 EFELYDDILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred HHHHHHHHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 4578899999999999 889 99999999999999 78899999998865443
No 414
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.12 E-value=1.1e-10 Score=66.06 Aligned_cols=48 Identities=31% Similarity=0.460 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSI 53 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~ 53 (82)
+...++..+..+|.++| +++++|||+||.|++.+.. +.-.+.|||++.
T Consensus 133 ~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 133 EIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred HHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHH
Confidence 45667888999999999 9999999999999999854 466799999987
No 415
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.07 E-value=4.5e-10 Score=58.75 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIP 56 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~ 56 (82)
...++.+++.++.++| ..+++|+|++|.|++++.++.+++.|||.+..+.
T Consensus 127 ~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 127 PEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred HHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 3457788999999999 8999999999999999999999999999885544
No 416
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.99 E-value=7.9e-10 Score=59.55 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecC
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIP 56 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~ 56 (82)
.+.+++.++.++| ..+++|+|++|.|++++.++.+++.|||.+....
T Consensus 147 ~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 147 QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence 3578899999999 9999999999999999988899999999886543
No 417
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.98 E-value=1.6e-09 Score=56.05 Aligned_cols=50 Identities=12% Similarity=0.155 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCC-CCeEeecCCCCCEEEccCCceEEeecceeeecC
Q 040586 3 HRLKVAMEIANAVAYLHVRFS-RPIVFRDIKPSTLLFQERNVAKFFNFSVSISIP 56 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~-~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~ 56 (82)
+...++.+++.++.++| . .+++|+|++|.|++++ ++.+++.|||.+....
T Consensus 115 ~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 115 DPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred cHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence 45678889999999999 7 8999999999999999 8889999999885443
No 418
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.98 E-value=9.6e-11 Score=67.91 Aligned_cols=73 Identities=27% Similarity=0.500 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCC---ccccCCCccccccCccCcce
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGK---THVNDTDKLIGTLGFIAPEC 79 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~pe~ 79 (82)
..++++.|++.++.| ++.+|+|+++.||+...+..+++.|||+........ ........-+||.+||+||.
T Consensus 360 ~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQ 433 (516)
T KOG1033|consen 360 LMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQ 433 (516)
T ss_pred HHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHH
Confidence 355677788888777 578999999999999999999999999875543322 11122335589999999998
Q ss_pred ec
Q 040586 80 MT 81 (82)
Q Consensus 80 ~~ 81 (82)
|.
T Consensus 434 i~ 435 (516)
T KOG1033|consen 434 IR 435 (516)
T ss_pred Hh
Confidence 76
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=98.91 E-value=2.2e-09 Score=59.10 Aligned_cols=68 Identities=26% Similarity=0.323 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
++.+..|+...+.++| ..+++|+|++++|++++.++.+.+.+|+.....+..... ...+..|.+||..
T Consensus 147 rl~lT~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~------~~~~~~~~PPe~~ 214 (288)
T PF14531_consen 147 RLSLTVQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC------SEFPVAFTPPELE 214 (288)
T ss_dssp HHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG------GGS-TTTS-HHHH
T ss_pred HHHHHHHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec------cCCCcccCChhhh
Confidence 4555688889999999 899999999999999999999999999866543322211 1224668888753
No 420
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.90 E-value=4.4e-09 Score=55.32 Aligned_cols=47 Identities=23% Similarity=0.390 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
+..++.+++.++.++| ..+++|+|+++.|++++ ++.+++.|||.+..
T Consensus 97 ~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 97 ELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 4577889999999999 89999999999999999 77889999998754
No 421
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.90 E-value=2.5e-09 Score=63.22 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
...++.+++.++.++| ..+++|+|++|.|+++ .+..+++.|||++...
T Consensus 430 ~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 430 NPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred HHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 4567899999999999 8999999999999999 5778999999998653
No 422
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.89 E-value=9.8e-10 Score=68.35 Aligned_cols=68 Identities=37% Similarity=0.501 Sum_probs=53.2
Q ss_pred HHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCC------------CccccCCCccccccCccCcc
Q 040586 11 IANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEG------------KTHVNDTDKLIGTLGFIAPE 78 (82)
Q Consensus 11 i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~pe 78 (82)
.+.+++|+| ..+++|+|++++|.++...+.+|+.|||+.+.-... ....-..++.+||+.|.|||
T Consensus 152 mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe 228 (1205)
T KOG0606|consen 152 MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE 228 (1205)
T ss_pred hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence 357899999 999999999999999999999999999988643211 11111234668999999999
Q ss_pred eec
Q 040586 79 CMT 81 (82)
Q Consensus 79 ~~~ 81 (82)
++.
T Consensus 229 Vil 231 (1205)
T KOG0606|consen 229 VIL 231 (1205)
T ss_pred hhh
Confidence 863
No 423
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=9.3e-09 Score=59.11 Aligned_cols=75 Identities=21% Similarity=0.324 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEc--cCC--ceEEeecceeeecCCCCcc---ccCCCccccccCccC
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQ--ERN--VAKFFNFSVSISIPEGKTH---VNDTDKLIGTLGFIA 76 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~--~~~--~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 76 (82)
..-++.|+++++.|+| ++++-|||+|++||++. ++. ...++|||++-.......+ .+......|....||
T Consensus 343 ~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmA 419 (598)
T KOG4158|consen 343 GRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMA 419 (598)
T ss_pred HHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecc
Confidence 3446789999999999 99999999999999994 333 4579999976433322221 122223456777899
Q ss_pred cceec
Q 040586 77 PECMT 81 (82)
Q Consensus 77 pe~~~ 81 (82)
||+..
T Consensus 420 PEi~t 424 (598)
T KOG4158|consen 420 PEIAT 424 (598)
T ss_pred hhhhh
Confidence 99754
No 424
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.86 E-value=7.2e-09 Score=54.09 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
.++.+++.++.++| ..+++|+|+++.|++++ ++.+++.|||++..
T Consensus 94 ~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 94 ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 57889999999999 89999999999999999 78899999998754
No 425
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.81 E-value=7.8e-10 Score=65.36 Aligned_cols=65 Identities=29% Similarity=0.358 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
+..+++.++.++| +.+++++|+|++|++++..+.+++.|||+++..-... ..+|+.-|||||+++
T Consensus 102 ~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-------~~cgt~eymApEI~~ 166 (612)
T KOG0603|consen 102 YLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-------IACGTYEYRAPEIIN 166 (612)
T ss_pred HHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhh-------hcccchhhhhhHhhh
Confidence 4567788999999 9999999999999999999999999999886543322 227899999999875
No 426
>PRK10345 hypothetical protein; Provisional
Probab=98.75 E-value=2.4e-08 Score=53.01 Aligned_cols=45 Identities=20% Similarity=0.292 Sum_probs=35.9
Q ss_pred HHHHHHHHHH-HHhhcCCCCCeEeecCCCCCEEEccC----CceEEee-cceee
Q 040586 6 KVAMEIANAV-AYLHVRFSRPIVFRDIKPSTLLFQER----NVAKFFN-FSVSI 53 (82)
Q Consensus 6 ~~~~~i~~~l-~~lh~~~~~~~~h~~l~~~~~l~~~~----~~~~l~~-~~~~~ 53 (82)
.++.+++.++ .|+| +++++|+|++|+||+++.. ..+++.| ||...
T Consensus 108 ~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~ 158 (210)
T PRK10345 108 AQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIGEST 158 (210)
T ss_pred HHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence 3467777777 8999 9999999999999999743 3789999 45443
No 427
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.73 E-value=1.3e-08 Score=64.06 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
.=++-|++.|+..+| +.++.|+|+|++||++.+=+++.+.||+-.
T Consensus 123 kWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 123 KWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred HHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhccccc
Confidence 346789999999999 999999999999999999999999999754
No 428
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.67 E-value=4e-08 Score=52.80 Aligned_cols=45 Identities=16% Similarity=0.255 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
...+++.++..+| ..+++|+|++|.|++++.++ +++.|||.....
T Consensus 140 ~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~ 184 (232)
T PRK10359 140 VKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCT 184 (232)
T ss_pred HHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCcccc
Confidence 3568889999999 99999999999999999888 999999876543
No 429
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.67 E-value=1.1e-07 Score=47.06 Aligned_cols=51 Identities=16% Similarity=0.278 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
....++.+++.++..+|.....+++|+|+++.|++++....+++.||+.+.
T Consensus 87 ~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 87 EKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 345667888999999994333579999999999999998899999999774
No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.63 E-value=7.1e-08 Score=60.26 Aligned_cols=50 Identities=24% Similarity=0.385 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-------CCceEEeecceeeec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-------RNVAKFFNFSVSISI 55 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-------~~~~~l~~~~~~~~~ 55 (82)
-.+.++.|++.-|..+| +.+|||+|+||+|+++.. ...+++.|||.+...
T Consensus 795 lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 795 LVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred hhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 35677899999999999 999999999999999963 345799999987543
No 431
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.46 E-value=2e-07 Score=54.69 Aligned_cols=74 Identities=24% Similarity=0.307 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
..+..+++.|+.|+|.. ....|+.+++.|++++....+|+.+||+.......... .......-..-|.|||+++
T Consensus 51 ~s~~rdi~~Gl~ylh~s--~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~-~~~~~~~~~~lw~aPellr 124 (484)
T KOG1023|consen 51 LSFIRDISKGLAYLHNS--PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEP-EAHHPIRKALLWTAPELLR 124 (484)
T ss_pred HHHHHHHHHHHHHHhcC--cceeeeeeccccceeeeeEEEEechhhhcccccccccc-cccchhHHHHhccCHHHhc
Confidence 44578899999999953 22389999999999999999999999988655320000 0000111235688999876
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.41 E-value=1.1e-07 Score=57.21 Aligned_cols=76 Identities=22% Similarity=0.373 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC-ceEEeecceeeecCCCCccccCCCcccc-ccCccCcceec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN-VAKFFNFSVSISIPEGKTHVNDTDKLIG-TLGFIAPECMT 81 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pe~~~ 81 (82)
.-.+..|+..++.|+|. ..++.|++++|+|.+++..+ ..+..|||++..+..............| ++.|+|||...
T Consensus 125 ~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~ 202 (601)
T KOG0590|consen 125 ASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLS 202 (601)
T ss_pred hhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCccccc
Confidence 34567889999999995 45789999999999999988 9999999999776652222222224466 89999999764
No 433
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.40 E-value=3.6e-07 Score=53.60 Aligned_cols=37 Identities=22% Similarity=0.426 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER 41 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~ 41 (82)
.+..++.|++.||.|||. ..++||.|+||+|+|+..+
T Consensus 188 ~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 188 CVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeecc
Confidence 456789999999999997 4589999999999999765
No 434
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.34 E-value=2e-06 Score=45.40 Aligned_cols=47 Identities=15% Similarity=0.258 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHh-hcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 5 LKVAMEIANAVAYL-HVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 5 ~~~~~~i~~~l~~l-h~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
..+..+++..+..+ | ..+++|+|+++.|+++.. +.+.+.||+-+...
T Consensus 127 ~~i~~~i~~~l~~l~H---~~glVHGDLs~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 127 KNAYYQVLSMMKQLYK---ECNLVHADLSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred HHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEC-CcEEEEECCCceeC
Confidence 45567888888887 8 889999999999999974 56899999966443
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.32 E-value=1.3e-06 Score=49.52 Aligned_cols=47 Identities=23% Similarity=0.364 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecc
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFS 50 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~ 50 (82)
.+-+|+.||.+|+.|||++ +..++|+++.+..+++..++.+|+....
T Consensus 177 ~wkkw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~a 223 (458)
T KOG1266|consen 177 AWKKWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVA 223 (458)
T ss_pred HHHHHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccC
Confidence 3567899999999999977 8899999999999999999988876544
No 436
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.32 E-value=2.1e-06 Score=45.03 Aligned_cols=45 Identities=22% Similarity=0.370 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 6 KVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
+++..+-.-+.-+| ..+++|+|+.++|+++.... +.+.|||++..
T Consensus 96 ~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 96 DLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred HHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 45666777788999 99999999999999998876 88999999864
No 437
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.32 E-value=2.4e-06 Score=43.50 Aligned_cols=44 Identities=20% Similarity=0.306 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhhcCCCCC-----eEeecCCCCCEEEccCCceEEeecceee
Q 040586 6 KVAMEIANAVAYLHVRFSRP-----IVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 6 ~~~~~i~~~l~~lh~~~~~~-----~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
....+++..+..+| ... ++|+|+++.|++++ +..+++.||+.+.
T Consensus 87 ~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 87 ENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred HHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 34578889999999 555 59999999999999 5678999999874
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.21 E-value=7.2e-06 Score=47.98 Aligned_cols=48 Identities=10% Similarity=0.213 Sum_probs=38.9
Q ss_pred HHHHHHHH-HHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecC
Q 040586 6 KVAMEIAN-AVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIP 56 (82)
Q Consensus 6 ~~~~~i~~-~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~ 56 (82)
.++..++. .+..+| ..+++|+|++|.|++++.++.+++.|||++....
T Consensus 260 ~ia~~~~~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 260 ALAENLARSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 34444444 366788 8899999999999999999999999999987654
No 439
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.15 E-value=7.1e-06 Score=43.49 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCC---ceEEeecceeeec
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERN---VAKFFNFSVSISI 55 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~---~~~l~~~~~~~~~ 55 (82)
...++.+++..+.-+| ..+++|+|+++.||+++.+. .+.+.||..+...
T Consensus 120 ~~~ll~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 120 RRELLRALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 4567788889999999 99999999999999999887 7889999876543
No 440
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.13 E-value=7e-06 Score=45.26 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEcc-------CCceEEeecceee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQE-------RNVAKFFNFSVSI 53 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~-------~~~~~l~~~~~~~ 53 (82)
+..++.+++..+.-+| ..+++|+|+.+.||+++. +..+.+.||+.+.
T Consensus 140 ~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 140 KRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 3467778899999999 999999999999999975 4577899998764
No 441
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.09 E-value=1.2e-05 Score=42.49 Aligned_cols=47 Identities=21% Similarity=0.395 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCc---eEEeecceeee
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNV---AKFFNFSVSIS 54 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~---~~l~~~~~~~~ 54 (82)
..++..+-..+.-+| .+.++|+|+.++|+++.+++. +.+.|||++..
T Consensus 116 ~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 116 AELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred HHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 466777888899999 999999999999999976553 36899998754
No 442
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=97.92 E-value=5.7e-05 Score=44.57 Aligned_cols=74 Identities=22% Similarity=0.209 Sum_probs=56.0
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCccee
Q 040586 1 MKHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECM 80 (82)
Q Consensus 1 ~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~ 80 (82)
|+-+++.+..++.+..-+| ..+..-+|++.+++++++.+.+.+.|-.-...-.. ...+.+.+|..-|++||+.
T Consensus 116 w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n----g~~~~cpVg~~eftPPElQ 188 (637)
T COG4248 116 WDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN----GTLHLCPVGVSEFTPPELQ 188 (637)
T ss_pred cHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeeccC----CceEecccCccccCCHHHh
Confidence 6678889999999999999 88999999999999999999988776432211111 1122356788899999975
Q ss_pred c
Q 040586 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 189 ~ 189 (637)
T COG4248 189 T 189 (637)
T ss_pred c
Confidence 3
No 443
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.90 E-value=0.00014 Score=38.23 Aligned_cols=47 Identities=19% Similarity=0.313 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHH-hhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 5 LKVAMEIANAVAY-LHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 5 ~~~~~~i~~~l~~-lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
..++.+++..+.. +| ..+++|+|+++.||+++.+ .+.+.||+-+...
T Consensus 109 ~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 109 KELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp HHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred HHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence 3455666664444 67 8899999999999999988 8999999876543
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.68 E-value=2.2e-05 Score=46.76 Aligned_cols=66 Identities=24% Similarity=0.388 Sum_probs=49.6
Q ss_pred HHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceeeecCCCCccc-cC-CCccccccCccCcceec
Q 040586 13 NAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSISIPEGKTHV-ND-TDKLIGTLGFIAPECMT 81 (82)
Q Consensus 13 ~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~pe~~~ 81 (82)
.|+.++| ...++|.+++++|+++..+ ..+++.+|++........... .. .....|...|++||++.
T Consensus 233 ~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~ 301 (524)
T KOG0601|consen 233 TALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN 301 (524)
T ss_pred ccccccC---CCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc
Confidence 3999999 9999999999999999988 888999999876665443221 11 11225567799998765
No 445
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.67 E-value=0.00022 Score=37.50 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=45.2
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 1 MKHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 1 ~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
|+.+.+++.+++..+.++++.....+.-.|+++.|+.++.++.+++.|....
T Consensus 58 w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v 109 (188)
T PF12260_consen 58 WEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDV 109 (188)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhc
Confidence 7789999999999999998654566788999999999999999999998644
No 446
>PRK09902 hypothetical protein; Provisional
Probab=97.59 E-value=0.00019 Score=38.54 Aligned_cols=47 Identities=17% Similarity=0.107 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCc--eEEeecceee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNV--AKFFNFSVSI 53 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~--~~l~~~~~~~ 53 (82)
+..++.+++..+.-+| ..++.|+|+.+.||+++..+. +.+.||.-++
T Consensus 130 k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 130 RQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred HHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 3567788999999999 999999999999999986666 7788876553
No 447
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.57 E-value=0.00012 Score=41.04 Aligned_cols=71 Identities=18% Similarity=0.254 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 2 KHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 2 ~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
.|.++++..++.|+.|+|+- ..-+..--+++..++++++...+++--...-.+... ...-.|-||+||.+.
T Consensus 289 sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~--------gr~y~pawmspealq 359 (448)
T KOG0195|consen 289 SQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEV--------GRAYSPAWMSPEALQ 359 (448)
T ss_pred chHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeecc--------ccccCcccCCHHHHh
Confidence 47889999999999999954 333445567788899988776654421111011100 112357799999764
No 448
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.56 E-value=0.00012 Score=44.85 Aligned_cols=71 Identities=24% Similarity=0.338 Sum_probs=48.3
Q ss_pred HHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeecCCCCcc------ccCCCccccccCccCcceec
Q 040586 9 MEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIPEGKTH------VNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 9 ~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~ 81 (82)
.+++.|+.|+|. ..+++|+++.|+++.+..++..|+..|+........... ........-..-|.+||++.
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 445678999995 567999999999999999999999999865433221111 11111112345688999764
No 449
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.27 E-value=0.0008 Score=40.71 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=30.5
Q ss_pred CCCeEeecCCCCCEEEccCC----ceEEeecceeeecC
Q 040586 23 SRPIVFRDIKPSTLLFQERN----VAKFFNFSVSISIP 56 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~----~~~l~~~~~~~~~~ 56 (82)
..+++|+|.+|.|++++.++ .+++.|||+.....
T Consensus 278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 67999999999999999887 89999999987653
No 450
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.22 E-value=0.0011 Score=35.95 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=34.4
Q ss_pred HHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 8 AMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 8 ~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
...+...+..+| +.++.|+|..|.|++++.++ +++.|++..
T Consensus 141 ~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i~iID~~~k 181 (229)
T PF06176_consen 141 AEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-IRIIDTQGK 181 (229)
T ss_pred HHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc-EEEEECccc
Confidence 355777899999 99999999999999998655 888998754
No 451
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=96.83 E-value=0.0034 Score=38.89 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 8 AMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 8 ~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
+.||+.||.|||. +.+++|+|+.-..++++..+..++.+|.+...
T Consensus 110 l~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~ 154 (690)
T KOG1243|consen 110 LFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSK 154 (690)
T ss_pred HHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEec
Confidence 4789999999974 66899999999999999999999999876643
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=96.77 E-value=0.0043 Score=34.87 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecc
Q 040586 9 MEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFS 50 (82)
Q Consensus 9 ~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~ 50 (82)
..++.-+.-.- ..+++|+|++.-||+++.++.+.+.||-
T Consensus 209 ~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~~~vIDwP 247 (304)
T COG0478 209 DKILEEVRKAY---RRGIVHGDLSEFNILVTEDGDIVVIDWP 247 (304)
T ss_pred HHHHHHHHHHH---HcCccccCCchheEEEecCCCEEEEeCc
Confidence 34444445445 5789999999999999999999999985
No 453
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.31 E-value=0.017 Score=34.17 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=39.0
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 1 MKHRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 1 ~~~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
|.+.+.++++.+.-+.-+.. +-..-|+++.-.|++++ .+.+.+.||.+++.
T Consensus 320 ~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 320 SEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred HHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeeeec
Confidence 35666777776654444442 45778999999999999 89999999999873
No 454
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.16 E-value=0.0027 Score=38.33 Aligned_cols=47 Identities=30% Similarity=0.484 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccC-CceEEeecceee
Q 040586 4 RLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQER-NVAKFFNFSVSI 53 (82)
Q Consensus 4 ~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~-~~~~l~~~~~~~ 53 (82)
++++..|++.++-++| .+..+|.|+++.||++..+ +..++.+++++.
T Consensus 368 ~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 368 RLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred hhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccc
Confidence 5667788999999999 8999999999999999886 677788887764
No 455
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.06 E-value=0.0093 Score=31.48 Aligned_cols=30 Identities=17% Similarity=0.387 Sum_probs=25.6
Q ss_pred CCCeEeecCCCCCEEEcc--CCceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQE--RNVAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~--~~~~~l~~~~~~ 52 (82)
...++|+|+.+.|++++. ...+.+.||+.+
T Consensus 173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~ 204 (223)
T cd05154 173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELA 204 (223)
T ss_pred CcEEEECCCCcccEEEcCCCCcEEEEEecccc
Confidence 567899999999999988 566789998866
No 456
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=95.98 E-value=0.012 Score=31.88 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=25.9
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++.+....+.||+.+.
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 4568999999999999877666799998663
No 457
>PRK05231 homoserine kinase; Provisional
Probab=95.59 E-value=0.013 Score=32.98 Aligned_cols=31 Identities=19% Similarity=0.476 Sum_probs=26.1
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
..+++|+|+.+.|++++.+....+.||+.+.
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 5579999999999999977666899998663
No 458
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=95.29 E-value=0.017 Score=30.58 Aligned_cols=31 Identities=13% Similarity=0.307 Sum_probs=21.4
Q ss_pred CCCeEeecCCCCCEEEc-cCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQ-ERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~-~~~~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++ .++.+.+.||+.+.
T Consensus 165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred CcEEEEeccccccceeeeccceeEEEecccce
Confidence 56799999999999999 55666899997664
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=95.24 E-value=0.024 Score=30.71 Aligned_cols=31 Identities=6% Similarity=0.090 Sum_probs=26.5
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++.+....+.||+.+.
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 4568999999999999988777899998663
No 460
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.23 E-value=0.032 Score=32.02 Aligned_cols=31 Identities=13% Similarity=0.363 Sum_probs=27.5
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++......|.||+++.
T Consensus 197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~ 227 (321)
T COG3173 197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELAT 227 (321)
T ss_pred CceeeeCCcccCCEEEeCCCeeEEEeccccc
Confidence 4578999999999999999989999998774
No 461
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=95.18 E-value=0.074 Score=29.74 Aligned_cols=46 Identities=11% Similarity=0.148 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 5 LKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 5 ~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
..+..+++..+.-+.. ..+++|+|++.=|+++. .+.+.+.|++=+.
T Consensus 169 ~~~~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV 214 (268)
T COG1718 169 EGLYEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAV 214 (268)
T ss_pred HHHHHHHHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECcccc
Confidence 3445566666666651 37899999999999999 7788899987553
No 462
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=94.96 E-value=0.14 Score=31.76 Aligned_cols=50 Identities=8% Similarity=0.112 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeeec
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSISI 55 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~ 55 (82)
..+.++.|+..+|.++| +.++-.+-+.+.+|+++.+.+++++.-|.....
T Consensus 394 ~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 394 VLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 46778999999999999 788888999999999988878887766655443
No 463
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.93 E-value=0.083 Score=29.43 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=30.8
Q ss_pred HHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecc
Q 040586 13 NAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFS 50 (82)
Q Consensus 13 ~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~ 50 (82)
+.+.-.|++ ....+|+|..|+|++-+..+.+|+.|=+
T Consensus 152 ~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~ 188 (308)
T PF07387_consen 152 KDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV 188 (308)
T ss_pred HHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence 456667755 6789999999999999999999988844
No 464
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=94.92 E-value=0.031 Score=31.50 Aligned_cols=30 Identities=23% Similarity=0.521 Sum_probs=26.3
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
..+++|+|+.+.|++++.+....+.||+.+
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~ 215 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFA 215 (307)
T ss_pred CCccCCCCCCcCcEEEECCceEEEeecccc
Confidence 568999999999999998876789999866
No 465
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=94.89 E-value=0.017 Score=36.03 Aligned_cols=46 Identities=22% Similarity=0.403 Sum_probs=28.2
Q ss_pred CEEEccCCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 35 TLLFQERNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 35 ~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
|++.......++.+|+.+.......... .....+||+.|+|||++.
T Consensus 508 ~~~~~p~~~~~~~~~~~~~~~~~g~~~~-~~~~~vGT~~Y~APE~l~ 553 (669)
T cd05610 508 NLYQTPKQVKIGTPYRTPKSVRRGAAPV-EGERILGTPDYLAPELLL 553 (669)
T ss_pred ceeECCccccccccCCCchhhhcccccc-cCCceeeCccccCHHHcC
Confidence 4555555556677787765543322211 122458899999999875
No 466
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=94.85 E-value=0.029 Score=31.25 Aligned_cols=31 Identities=16% Similarity=0.400 Sum_probs=26.2
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++.+....+.||..+.
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 4578999999999999988777899997653
No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=94.72 E-value=0.12 Score=27.82 Aligned_cols=31 Identities=16% Similarity=0.419 Sum_probs=25.9
Q ss_pred CCCeEeecCCCCCEEEcc-CCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++. +..+.+.||..+.
T Consensus 169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred CEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 456899999999999997 5778999987653
No 468
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=94.63 E-value=0.056 Score=29.34 Aligned_cols=30 Identities=7% Similarity=0.125 Sum_probs=25.3
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++..+ +.+.||+.+.
T Consensus 152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 34578999999999999877 8899998663
No 469
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.63 E-value=0.017 Score=34.96 Aligned_cols=35 Identities=20% Similarity=0.141 Sum_probs=25.7
Q ss_pred CCceEEeecceeeecCCCCccccCCCccccccCccCcceec
Q 040586 41 RNVAKFFNFSVSISIPEGKTHVNDTDKLIGTLGFIAPECMT 81 (82)
Q Consensus 41 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~ 81 (82)
...+|++|||-+++.....+.. .-|.-|+|||++-
T Consensus 390 di~vKIaDlGNACW~~khFT~D------IQTRQYRapEVll 424 (590)
T KOG1290|consen 390 DIRVKIADLGNACWVHKHFTED------IQTRQYRAPEVLL 424 (590)
T ss_pred ceeEEEeeccchhhhhhhhchh------hhhhhccCcceee
Confidence 4578999999998766544432 3377899999875
No 470
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=94.47 E-value=0.29 Score=27.47 Aligned_cols=31 Identities=10% Similarity=0.230 Sum_probs=26.3
Q ss_pred CCCeEeecCCCCCEEEccC----CceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQER----NVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~----~~~~l~~~~~~~ 53 (82)
...+.|+|+.+.|++++.+ ..+.+.||..+.
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 5578999999999999874 778999997664
No 471
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=94.37 E-value=0.061 Score=30.12 Aligned_cols=31 Identities=19% Similarity=0.439 Sum_probs=24.8
Q ss_pred CCCeEeecCCCCCEEEccCC-ceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERN-VAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~-~~~l~~~~~~~ 53 (82)
...++|+|+.+.|++++.++ ...+.||+.+.
T Consensus 184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~ 215 (276)
T cd05152 184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAK 215 (276)
T ss_pred CCeeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence 34689999999999998744 45789998764
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=94.01 E-value=0.074 Score=29.15 Aligned_cols=28 Identities=11% Similarity=0.253 Sum_probs=23.8
Q ss_pred CCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 24 RPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 24 ~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
..+.|+|+.+.|++++.++ +.+.||..+
T Consensus 146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a 173 (256)
T TIGR02721 146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYA 173 (256)
T ss_pred CeeecCCCCcCcEEEeCCC-CEEEecccc
Confidence 4689999999999998766 689998765
No 473
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=93.77 E-value=0.29 Score=28.40 Aligned_cols=27 Identities=26% Similarity=0.646 Sum_probs=23.7
Q ss_pred eEeecCCCCCEEEccCCc-eEEeeccee
Q 040586 26 IVFRDIKPSTLLFQERNV-AKFFNFSVS 52 (82)
Q Consensus 26 ~~h~~l~~~~~l~~~~~~-~~l~~~~~~ 52 (82)
+||.|+.+.|++++.... ..+.||+-+
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa 226 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA 226 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEcccc
Confidence 899999999999998874 788898755
No 474
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=93.72 E-value=0.21 Score=29.52 Aligned_cols=35 Identities=9% Similarity=0.292 Sum_probs=29.5
Q ss_pred HHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecc
Q 040586 13 NAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFS 50 (82)
Q Consensus 13 ~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~ 50 (82)
.-+.-+. ..++||+|++-=|+++..+..+.+.||-
T Consensus 213 ~~Iv~la---~~GlIHgDFNEFNimv~dd~~i~vIDFP 247 (465)
T KOG2268|consen 213 GLIVRLA---NHGLIHGDFNEFNIMVKDDDKIVVIDFP 247 (465)
T ss_pred HHHHHHH---HcCceecccchheeEEecCCCEEEeech
Confidence 3345566 7899999999999999999989999984
No 475
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=93.59 E-value=0.1 Score=34.67 Aligned_cols=40 Identities=28% Similarity=0.400 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecc
Q 040586 8 AMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFS 50 (82)
Q Consensus 8 ~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~ 50 (82)
...+.....++| .....|+++++.+.+....+..++.+|+
T Consensus 910 i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~ 949 (1205)
T KOG0606|consen 910 ILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFG 949 (1205)
T ss_pred hHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccc
Confidence 345566788999 6668999999999999888888888876
No 476
>PRK10271 thiK thiamine kinase; Provisional
Probab=93.41 E-value=0.11 Score=27.63 Aligned_cols=29 Identities=7% Similarity=0.200 Sum_probs=24.2
Q ss_pred CCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 24 RPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 24 ~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
....|+|+.+.|++++.++ +++.|++.+.
T Consensus 77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~ 105 (188)
T PRK10271 77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAG 105 (188)
T ss_pred eeeecCCCCCccEEEECCC-EEEEeCCccc
Confidence 3568999999999988776 8899998663
No 477
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=93.24 E-value=0.13 Score=28.93 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=24.1
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
..+++|+|+.+.|++++. ..+.+.||..+
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~ 214 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC 214 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence 457899999999999987 55789998754
No 478
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=92.95 E-value=0.29 Score=27.72 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=26.5
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
..+++|+|+...|++++.++...+.||-.+.
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 4579999999999999988888888986553
No 479
>PRK06149 hypothetical protein; Provisional
Probab=92.22 E-value=0.5 Score=31.25 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=24.0
Q ss_pred CCCeEeecCCCCCEEEccCC-----ceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQERN-----VAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~-----~~~l~~~~~~ 52 (82)
..++||.|+...|++++.+. ...+.|||-+
T Consensus 207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~ 241 (972)
T PRK06149 207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDL 241 (972)
T ss_pred cccccCCCCCcccEEEcCCCCCCcceeEEEEcccc
Confidence 56799999999999998642 2478899855
No 480
>PRK06148 hypothetical protein; Provisional
Probab=91.98 E-value=0.84 Score=30.47 Aligned_cols=31 Identities=10% Similarity=0.381 Sum_probs=24.9
Q ss_pred CCCeEeecCCCCCEEEccCC---ceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERN---VAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~---~~~l~~~~~~~ 53 (82)
...+||.|+...|++++.+. ...+.|||-+.
T Consensus 202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred CcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 56799999999999998764 34689998553
No 481
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=91.67 E-value=0.92 Score=25.53 Aligned_cols=29 Identities=14% Similarity=0.316 Sum_probs=25.7
Q ss_pred CCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 24 RPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 24 ~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
..+.|.|+.+.|++.+..+.+.+.||.-+
T Consensus 153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyA 181 (269)
T COG0510 153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYA 181 (269)
T ss_pred eeeecCCCCccceEEcCCCcEEEEecccC
Confidence 35889999999999999999999998655
No 482
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=91.07 E-value=1 Score=26.97 Aligned_cols=29 Identities=10% Similarity=0.313 Sum_probs=24.3
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
...++|+|+.+.|+++..+ .+++.|+..+
T Consensus 222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a 250 (401)
T PRK09550 222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFA 250 (401)
T ss_pred CCceeeccCCcccEEeeCC-CcEEEecccc
Confidence 6679999999999999776 4788888655
No 483
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=91.02 E-value=0.21 Score=26.61 Aligned_cols=30 Identities=17% Similarity=0.369 Sum_probs=20.4
Q ss_pred CCeEeecCCCCCEEE-ccCCceEEeecceee
Q 040586 24 RPIVFRDIKPSTLLF-QERNVAKFFNFSVSI 53 (82)
Q Consensus 24 ~~~~h~~l~~~~~l~-~~~~~~~l~~~~~~~ 53 (82)
..+.|.|+.+.|+++ ..+..+++.||..+.
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 467899999999999 788899999997664
No 484
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=90.78 E-value=0.33 Score=25.76 Aligned_cols=31 Identities=13% Similarity=0.273 Sum_probs=24.2
Q ss_pred CCCeEeecCCCCCEEEccCC-----ceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERN-----VAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~-----~~~l~~~~~~~ 53 (82)
...+.|+|+.+.|+++..+. .+.+.||..+.
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~ 154 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH 154 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence 34689999999999997543 57788887653
No 485
>PLN02236 choline kinase
Probab=90.12 E-value=0.46 Score=27.55 Aligned_cols=31 Identities=6% Similarity=0.244 Sum_probs=25.3
Q ss_pred CCCeEeecCCCCCEEEcc-CCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQE-RNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~ 53 (82)
...+.|+|+.+.|++++. +..+.+.||..+.
T Consensus 199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 447899999999999976 4678999987664
No 486
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=89.43 E-value=0.61 Score=28.79 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=30.1
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceeeecC
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSISIP 56 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~~~ 56 (82)
..+.+|.|.-|.|+++..++..-..|||+.....
T Consensus 283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred hcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 5689999999999999999999999999876543
No 487
>PRK11768 serine/threonine protein kinase; Provisional
Probab=87.75 E-value=2.4 Score=24.42 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=23.3
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecceee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVSI 53 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~ 53 (82)
..+++|+|+.+.|++++ + ...+.||+-+.
T Consensus 195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~ 223 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDAR 223 (325)
T ss_pred CccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence 45689999999999995 3 57789987553
No 488
>PHA03111 Ser/Thr kinase; Provisional
Probab=87.35 E-value=4.5 Score=24.34 Aligned_cols=34 Identities=18% Similarity=0.321 Sum_probs=21.8
Q ss_pred HHHHHHHHH-HHhhcCCCCCeEeecCCCCCEEEcc
Q 040586 7 VAMEIANAV-AYLHVRFSRPIVFRDIKPSTLLFQE 40 (82)
Q Consensus 7 ~~~~i~~~l-~~lh~~~~~~~~h~~l~~~~~l~~~ 40 (82)
+..|++.-. ......+....+|-|+||.||++-+
T Consensus 284 ifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd 318 (444)
T PHA03111 284 IFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFD 318 (444)
T ss_pred HHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEec
Confidence 446665433 2223333457899999999999843
No 489
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=85.19 E-value=3.7 Score=24.51 Aligned_cols=29 Identities=10% Similarity=0.351 Sum_probs=23.6
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
...++|+|+.+.|+++..+. .++.|+..+
T Consensus 191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~ 219 (370)
T TIGR01767 191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFA 219 (370)
T ss_pred cceeeeccCCcccEEEcCCC-CEEEcCccc
Confidence 67899999999999997654 568887654
No 490
>PLN02876 acyl-CoA dehydrogenase
Probab=85.18 E-value=1.3 Score=28.88 Aligned_cols=30 Identities=23% Similarity=0.432 Sum_probs=23.1
Q ss_pred CCeEeecCCCCCEEEccC--CceEEeecceee
Q 040586 24 RPIVFRDIKPSTLLFQER--NVAKFFNFSVSI 53 (82)
Q Consensus 24 ~~~~h~~l~~~~~l~~~~--~~~~l~~~~~~~ 53 (82)
..++|+|+++.|++++.. ....|.|+.++.
T Consensus 225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~ 256 (822)
T PLN02876 225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELST 256 (822)
T ss_pred cceEecCcccccEEEcCCCCeEEEEEeeeccc
Confidence 359999999999999752 335688887664
No 491
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=84.69 E-value=1.5 Score=25.34 Aligned_cols=30 Identities=17% Similarity=0.313 Sum_probs=24.4
Q ss_pred CCeEeecCCCCCEEEcc-CCceEEeecceee
Q 040586 24 RPIVFRDIKPSTLLFQE-RNVAKFFNFSVSI 53 (82)
Q Consensus 24 ~~~~h~~l~~~~~l~~~-~~~~~l~~~~~~~ 53 (82)
....|.|+.+.|++++. +..+++.||..+.
T Consensus 182 ~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 182 VVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred eEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 35789999999999974 4679999987663
No 492
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=84.40 E-value=5.2 Score=23.53 Aligned_cols=28 Identities=18% Similarity=0.476 Sum_probs=22.6
Q ss_pred CCCeEeecCCCCCEEEccC----CceEEeecc
Q 040586 23 SRPIVFRDIKPSTLLFQER----NVAKFFNFS 50 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~----~~~~l~~~~ 50 (82)
.+..+|||+-+.|+++... ..+.+.||-
T Consensus 199 ~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDFQ 230 (351)
T COG3178 199 PKVLVHRDFHSRNLMWTADRAGADRVGVLDFQ 230 (351)
T ss_pred CceeeeccccCccceecCCccCCCCCceeehh
Confidence 6789999999999999765 366777773
No 493
>PRK12396 5-methylribose kinase; Reviewed
Probab=84.09 E-value=4.3 Score=24.59 Aligned_cols=29 Identities=7% Similarity=0.339 Sum_probs=22.8
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~ 52 (82)
...++|+|+.+.||+++.+. .++.|...+
T Consensus 226 ~~aLlHGDlHtGSI~v~~~~-~kvIDpEFA 254 (409)
T PRK12396 226 AQALIHGDLHTGSVFVKNDS-TKVIDPEFA 254 (409)
T ss_pred chhhccCcCCCCCEEecCCc-eEEEccccc
Confidence 67899999999999998763 667764433
No 494
>PLN02756 S-methyl-5-thioribose kinase
Probab=81.48 E-value=7.7 Score=23.66 Aligned_cols=27 Identities=7% Similarity=0.306 Sum_probs=21.6
Q ss_pred CCCeEeecCCCCCEEEccCCceEEeecc
Q 040586 23 SRPIVFRDIKPSTLLFQERNVAKFFNFS 50 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~~~~l~~~~ 50 (82)
...++|+|+.+.||++..+. .++.|-.
T Consensus 229 ~~~L~HGDl~~g~i~~~~~~-~~~id~e 255 (418)
T PLN02756 229 AQALVHGDLHTGSVMVTPDS-TQVIDPE 255 (418)
T ss_pred ccceeecCCCCCcEEEcCCC-ceEecch
Confidence 67899999999999998765 5555533
No 495
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=79.73 E-value=5.3 Score=21.88 Aligned_cols=37 Identities=30% Similarity=0.378 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecce
Q 040586 7 VAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSV 51 (82)
Q Consensus 7 ~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~ 51 (82)
-+.++.+-+..+| +.+++-+|++..|.. .-++.|||.
T Consensus 169 ~~~~~~~dl~~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~ 205 (207)
T PF13095_consen 169 DIPQMLRDLKILH---KLGIVPRDVKPRNYR-----GGKLVDFSS 205 (207)
T ss_pred HHHHHHHHHHHHH---HCCeeeccCcccccc-----CCEEEeccc
Confidence 3567778888999 999999999998876 235677764
No 496
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=77.79 E-value=11 Score=23.87 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=27.1
Q ss_pred CCCeEeecCCCCCEEEcc----CCceEEeecceeeec
Q 040586 23 SRPIVFRDIKPSTLLFQE----RNVAKFFNFSVSISI 55 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~----~~~~~l~~~~~~~~~ 55 (82)
..+.+|.|--|.|+++.+ +..+.+.|+|+....
T Consensus 319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 557999999999999984 567789999987543
No 497
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=77.53 E-value=1.7 Score=24.36 Aligned_cols=30 Identities=13% Similarity=0.295 Sum_probs=23.0
Q ss_pred CCCeEeecCCCCCEEEccCC-----ceEEeeccee
Q 040586 23 SRPIVFRDIKPSTLLFQERN-----VAKFFNFSVS 52 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~~~~-----~~~l~~~~~~ 52 (82)
...++|+|+...|+++..+. .+.+.||-++
T Consensus 214 ~~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~ 248 (294)
T PF02958_consen 214 FNVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLA 248 (294)
T ss_pred ceEEEcCccCHHhEeEccccccccccceeeccccc
Confidence 34689999999999996542 4678887655
No 498
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=76.56 E-value=4.4 Score=24.42 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=14.6
Q ss_pred CCCeEeecCCCCCEEEc
Q 040586 23 SRPIVFRDIKPSTLLFQ 39 (82)
Q Consensus 23 ~~~~~h~~l~~~~~l~~ 39 (82)
-...+|-|++|.|+++-
T Consensus 297 c~nF~H~DLKPdNILiF 313 (434)
T PF05445_consen 297 CTNFLHVDLKPDNILIF 313 (434)
T ss_pred cceeeecccCcCcEEEe
Confidence 45689999999999984
No 499
>PF10140 YukC: WXG100 protein secretion system (Wss), protein YukC; InterPro: IPR018778 Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This protein is designated YukC in Bacillus subtilis and EssB is Staphylococcus aureus. ; PDB: 4ANN_A.
Probab=72.81 E-value=3.9 Score=24.31 Aligned_cols=47 Identities=17% Similarity=0.282 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCeEeecCCCCCEEEccCCceEEeecceeee
Q 040586 3 HRLKVAMEIANAVAYLHVRFSRPIVFRDIKPSTLLFQERNVAKFFNFSVSIS 54 (82)
Q Consensus 3 ~~~~~~~~i~~~l~~lh~~~~~~~~h~~l~~~~~l~~~~~~~~l~~~~~~~~ 54 (82)
.+++++.++.. +.. | ...-.|.-+.|+|++++.+..+++...|+-..
T Consensus 60 eklr~~~ni~~-l~~-~---~~~~~~f~l~P~Nl~fd~~~~p~i~hrGi~~~ 106 (359)
T PF10140_consen 60 EKLRLLINIAA-LKE-H---LNSRYTFILHPENLVFDKNLMPKILHRGIKEI 106 (359)
T ss_dssp HHHHHHHHGGG-GGG-G---GGSSEE---SGGGEEE-TTS-EEES--EETTT
T ss_pred HHHHHHHHHHH-HHH-H---hcCceeEEEechheEEcCCCCEEEEEcCCcCC
Confidence 45566665332 221 1 22457888999999999999999998886543
No 500
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=71.82 E-value=12 Score=20.23 Aligned_cols=24 Identities=38% Similarity=0.686 Sum_probs=19.6
Q ss_pred HHHhhcCCCCCeEeecCCCCCEEEccC
Q 040586 15 VAYLHVRFSRPIVFRDIKPSTLLFQER 41 (82)
Q Consensus 15 l~~lh~~~~~~~~h~~l~~~~~l~~~~ 41 (82)
..++. ...++..|+++.||++...
T Consensus 131 ~~~l~---~~~Iv~~dl~~~NIv~~~~ 154 (199)
T PF10707_consen 131 KRYLL---DHHIVIRDLNPHNIVVQRR 154 (199)
T ss_pred HHHHH---HcCCeecCCCcccEEEEec
Confidence 45666 7789999999999999754
Done!