Citrus Sinensis ID: 040592
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 350 | ||||||
| 224130880 | 590 | predicted protein [Populus trichocarpa] | 0.957 | 0.567 | 0.663 | 1e-121 | |
| 224125440 | 543 | predicted protein [Populus trichocarpa] | 0.957 | 0.616 | 0.622 | 1e-112 | |
| 359478663 | 522 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.954 | 0.639 | 0.607 | 1e-112 | |
| 297746155 | 576 | unnamed protein product [Vitis vinifera] | 0.928 | 0.564 | 0.634 | 1e-112 | |
| 359479013 | 609 | PREDICTED: putative leucine-rich repeat | 0.928 | 0.533 | 0.634 | 1e-112 | |
| 224125430 | 372 | predicted protein [Populus trichocarpa] | 0.891 | 0.838 | 0.612 | 1e-108 | |
| 356561859 | 549 | PREDICTED: probable LRR receptor-like se | 0.945 | 0.602 | 0.561 | 2e-98 | |
| 224147524 | 305 | predicted protein [Populus trichocarpa] | 0.828 | 0.950 | 0.554 | 9e-92 | |
| 147816691 | 361 | hypothetical protein VITISV_009236 [Viti | 0.822 | 0.797 | 0.534 | 1e-91 | |
| 255578743 | 511 | serine-threonine protein kinase, plant-t | 0.722 | 0.495 | 0.608 | 2e-83 |
| >gi|224130880|ref|XP_002328399.1| predicted protein [Populus trichocarpa] gi|222838114|gb|EEE76479.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/339 (66%), Positives = 258/339 (76%), Gaps = 4/339 (1%)
Query: 5 SFNLFVSIDCGASGSYTDENSIAWIGDDDLIQNGESKVVQSGNALSDDHVMSTLRVFSTR 64
S N VS+DCGAS SY DENSI WIGDDDL +NG+S+VVQ N S HVMSTLRVF+T
Sbjct: 17 SGNADVSVDCGASDSYADENSIVWIGDDDLFKNGQSEVVQPSNPAS--HVMSTLRVFTTL 74
Query: 65 KKNCYTILASKGGQVLVRASFNYGNYDKKSSPPSFDLHFDGNLWATVKTSSEGLVYYEAI 124
KKNCY+I A KG VLVRASF YGNYDK+SSPPSFDL FDGN WATVKTS + LVYYE +
Sbjct: 75 KKNCYSITADKGSLVLVRASFFYGNYDKRSSPPSFDLLFDGNNWATVKTSLDQLVYYEVM 134
Query: 125 YVVKGDSISVCVAQTNPNQLPFISAIEVRSLGSHMYSHVDAAYALFLRSRTAYGANGTIR 184
YVVK D+ S+C+AQT PNQ PFISA+EVR+L S MY VD YALFLRSR AYGAN T+R
Sbjct: 135 YVVKSDTTSICLAQTQPNQFPFISALEVRNLDSKMYGDVDPNYALFLRSRIAYGANTTVR 194
Query: 185 YSDDGYDRIWNPAVIGSGLNMVTSDALFIDV-NVEDEPPQAVMQNAITASTASQSIALGT 243
+ DDGYDRIW P +GSGL V SDA+ IDV N D PP V+QNAIT S S SI L
Sbjct: 195 FPDDGYDRIWVPERVGSGLVSVASDAILIDVANAPDNPPPEVLQNAITTSNTSASITLNP 254
Query: 244 NFPTEKVPIYITMYFSEVTELDSTQKRAFQFRINNKPDSDTIVPPYGKVTELYVSNMTAS 303
FP + V +Y+ +YFSEVTELD+TQKR+F I+N S+ I+PPY E+ +N TAS
Sbjct: 255 GFPDQDVSVYMNLYFSEVTELDATQKRSFNAYIDNIKSSEPIIPPYEAAKEVS-ANFTAS 313
Query: 304 SNTSFSLVPTADSTLPPLINAMEVFTVSDQLADGTNTKD 342
+NTS SLV T DSTLPPLINAMEVF VSD+L DGTN+KD
Sbjct: 314 ANTSISLVSTTDSTLPPLINAMEVFFVSDRLTDGTNSKD 352
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125440|ref|XP_002319587.1| predicted protein [Populus trichocarpa] gi|222857963|gb|EEE95510.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359478663|ref|XP_003632155.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g05700-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297746155|emb|CBI16211.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359479013|ref|XP_002281598.2| PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224125430|ref|XP_002319584.1| predicted protein [Populus trichocarpa] gi|222857960|gb|EEE95507.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356561859|ref|XP_003549194.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g59680-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224147524|ref|XP_002336492.1| predicted protein [Populus trichocarpa] gi|222835550|gb|EEE73985.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147816691|emb|CAN77768.1| hypothetical protein VITISV_009236 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255578743|ref|XP_002530229.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223530233|gb|EEF32135.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 350 | ||||||
| TAIR|locus:4515102579 | 574 | AT1G24485 "AT1G24485" [Arabido | 0.922 | 0.562 | 0.372 | 3.8e-53 | |
| TAIR|locus:2075326 | 471 | AT3G46280 "AT3G46280" [Arabido | 0.908 | 0.675 | 0.374 | 6.3e-53 | |
| TAIR|locus:2075301 | 434 | AT3G46260 "AT3G46260" [Arabido | 0.945 | 0.762 | 0.369 | 2.4e-51 | |
| TAIR|locus:2075316 | 470 | AT3G46270 "AT3G46270" [Arabido | 0.934 | 0.695 | 0.356 | 8.3e-51 | |
| TAIR|locus:2017572 | 882 | AT1G51790 [Arabidopsis thalian | 0.948 | 0.376 | 0.323 | 2.8e-38 | |
| TAIR|locus:2195850 | 890 | AT1G51860 [Arabidopsis thalian | 0.942 | 0.370 | 0.312 | 6e-38 | |
| TAIR|locus:2017557 | 894 | IOS1 "IMPAIRED OOMYCETE SUSCEP | 0.911 | 0.356 | 0.303 | 7.7e-38 | |
| TAIR|locus:2059093 | 876 | FRK1 "FLG22-induced receptor-l | 0.934 | 0.373 | 0.320 | 3.2e-37 | |
| TAIR|locus:2118344 | 863 | AT4G29450 [Arabidopsis thalian | 0.945 | 0.383 | 0.323 | 8.4e-37 | |
| TAIR|locus:2024987 | 864 | AT1G07550 [Arabidopsis thalian | 0.937 | 0.379 | 0.293 | 2.3e-36 |
| TAIR|locus:4515102579 AT1G24485 "AT1G24485" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 125/336 (37%), Positives = 188/336 (55%)
Query: 10 VSIDCGASGSYTDENSIAWIGDDDLIQNG-ESKVVQSGNALSDDHVMSTLRVFSTRKKNC 68
+SIDCG+S S+ D ++ W+GD D + G SK V ++ ++TLR F T + NC
Sbjct: 29 ISIDCGSSSSHIDADNRTWVGDTDFVATGLTSKFVPFSKFPAE---LTTLRYFPTGETNC 85
Query: 69 YT-ILASKGGQVLVRASFNYGNYDKKSSPPSFDLHFDG-NLWATVKTSSEGLVYYEAIYV 126
YT I KGG+VLVR F YG+YD++S+ P+FD+ +DG + ++ V T+ E + EAI++
Sbjct: 86 YTNIPVEKGGKVLVRTRFLYGDYDEESTYPTFDVVYDGKHRYSVVTTTFETVTESEAIFI 145
Query: 127 VKGDSISVCVAQTNPNQLPFISAIEVRSLGSHMYSHVDAAYALFLRSRTAYGANGTIRYS 186
+ +ISVC +T ++ PF+S IEVR L MY+ + L+ R AYGA +R+
Sbjct: 146 PENGNISVCFFRTLSSKTPFVSTIEVRRLDDSMYTDLGPKEGFILQQRIAYGAQELVRFP 205
Query: 187 DDGYDRIWNPAVIGSGLNMVTSDALFIDVN-VEDEPPQAVMQNXXXXXXXXXXXXLGTNF 245
D YDRIW PA + + + +TS A ID ++ PP+ +++
Sbjct: 206 YDPYDRIWMPASVFA--SHLTSSATSIDTTGADNRPPEIILRTSWSQKDMAFYDI---KL 260
Query: 246 PTEKVPIYITMYFSEVTELDSTQKRAFQFRINNKP-DSDTIVPPYGKVTELYVSNMTASS 304
P V YI +YFSE L S QKR+F +K SD IVPP+G VT+ + ++ +
Sbjct: 261 PFSGVTFYIVIYFSEPLSLGSDQKRSFNVYYEDKQVGSDLIVPPFGAVTQASLRDVVKTE 320
Query: 305 NTSFSLVPTADSTLPPLINAMEVFTVSDQLADGTNT 340
+ T DSTL PLINA+E++ +S+ G T
Sbjct: 321 LAYLTFEATPDSTLDPLINALELYVISNSGGSGNGT 356
|
|
| TAIR|locus:2075326 AT3G46280 "AT3G46280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075301 AT3G46260 "AT3G46260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075316 AT3G46270 "AT3G46270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2017572 AT1G51790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2195850 AT1G51860 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2017557 IOS1 "IMPAIRED OOMYCETE SUSCEPTIBILITY 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2059093 FRK1 "FLG22-induced receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2118344 AT4G29450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024987 AT1G07550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 350 | |||
| pfam12819 | 335 | pfam12819, Malectin_like, Carbohydrate-binding pro | 1e-92 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-10 |
| >gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 1e-92
Identities = 124/339 (36%), Positives = 170/339 (50%), Gaps = 24/339 (7%)
Query: 12 IDCGASG--SYTDE-NSIAWIGDDDLIQNGESKVVQSGN-ALSDDHVMSTLRVFSTRKKN 67
IDCG SYTD I W+ D I G+S + N + TLR F K+N
Sbjct: 1 IDCGLPSNESYTDPSTGITWVSDAGFIDTGKSGNISKENSSSFLSKPYKTLRSFPDGKRN 60
Query: 68 CYTI--LASKGGQVLVRASFNYGNYDKK---SSPPSFDLHFDGNLWATVKT---SSEGLV 119
CYT+ KG + L+RA+F YGNYD SSPPSFDL+ NLW TV S + +V
Sbjct: 61 CYTLPVTPGKGTKYLIRATFLYGNYDGLNSVSSPPSFDLYLGVNLWTTVNLSNDSGDSVV 120
Query: 120 YYEAIYVVKGDSISVCVAQTNPNQLPFISAIEVRSLGSHMYSHVDAAYALFLRSRTAYGA 179
I+V K D++SVC+ T PFISA+E+R L +Y + AL L +R +G
Sbjct: 121 KEYIIHVTKSDTLSVCLVNTGTGT-PFISALELRPLPDSLYPSSGGSQALKLVARLNFGG 179
Query: 180 NG-TIRYSDDGYDRIWNP--AVIGSGLNMVTSDALFIDVNVEDEPPQAVMQNAITASTAS 236
+ TIRY DD YDRIW P + G + N PP AV+Q A+T + AS
Sbjct: 180 SEGTIRYPDDVYDRIWEPFFSSPGWSQISTSLSVDISSNNAPYIPPSAVLQTAVTPTNAS 239
Query: 237 QSIALGTNFPTEKVPIYITMYFSEVTELDSTQKRAFQFRINNKPDSDTIVPPY-----GK 291
+ + Y+ ++F+E + S + R F IN K + P Y G
Sbjct: 240 APLNFTWDLVDPNFEYYVYLHFAE---IQSLETREFDIYINGKTVYGDVSPKYLGTDTGA 296
Query: 292 VTELYVSNMTASSNTSFSLVPTADSTLPPLINAMEVFTV 330
+ + N++ + SLVPT+ STLPPL+NA+E+F V
Sbjct: 297 LYLDFPVNVSGGGLLNISLVPTSGSTLPPLLNALEIFKV 335
|
Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 350 | |||
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 100.0 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 100.0 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.23 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.07 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.02 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 98.16 |
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=605.75 Aligned_cols=318 Identities=37% Similarity=0.653 Sum_probs=261.7
Q ss_pred EccCCCCC---CcC-CCCceeecCCCcccCCCceeeecCC---CCCccccceeeEeecCCCCcEEEEeec--CCceEEEE
Q 040592 12 IDCGASGS---YTD-ENSIAWIGDDDLIQNGESKVVQSGN---ALSDDHVMSTLRVFSTRKKNCYTILAS--KGGQVLVR 82 (350)
Q Consensus 12 IdCG~~~~---~~d-~~g~~w~~D~~fi~~g~~~~v~~~~---~~~~~~~~~t~R~Fp~g~r~cY~l~v~--~g~~ylvR 82 (350)
||||++++ |+| .+||+|++|.+|+++|+++++++.. .....++|+|||+||+|+|+||+|++. +|+|||||
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~yliR 80 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDDFIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGKYLIR 80 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCCcccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCceEEEE
Confidence 79999744 677 4699999999999999988884321 123468999999999999999999997 46699999
Q ss_pred EEEecCCCCCCC-----CCCeeEEEeCCcEEEEEEeCCC--CcEEEEEEEEec-CCeEEEEEEecCCCCcceEEEEEeEE
Q 040592 83 ASFNYGNYDKKS-----SPPSFDLHFDGNLWATVKTSSE--GLVYYEAIYVVK-GDSISVCVAQTNPNQLPFISAIEVRS 154 (350)
Q Consensus 83 ~~F~ygnyd~~~-----~~p~Fdl~~g~~~w~~v~~~~~--~~~~~E~i~~~~-~~~l~vcf~~~~~~~~pFIs~iEl~~ 154 (350)
|||+|||||+++ .+|.|||++|++.|.+|+.+.+ ..++||+++.+. ++.|+|||+|++++.+||||+|||||
T Consensus 81 l~F~~gnyd~~~fs~~~~~~~FdL~~~~n~~~tV~~~~~~~~~~~~E~ii~v~~~~~l~vclv~~~~g~~pFIsaiEl~~ 160 (347)
T PF12819_consen 81 LHFYYGNYDGLNFSVSSSPPTFDLLLGFNFWSTVNLSNSPSSPVVKEFIINVTWSDTLSVCLVPTGSGTFPFISAIELRP 160 (347)
T ss_pred EEeccccccccccccccCCcceEEEECCceeEEEEecCCCcceEEEEEEEEEcCCCcEEEEEEeCCCCCCCceeEEEEEE
Confidence 999999999874 2577999999999999986533 358999777777 79999999999863449999999999
Q ss_pred cCCCcccc--cccceeEEEEEeeecCCCC-cccCCCCCCCccccCCCCCCCceeeecccEEec---cCCCCCchHHHHHH
Q 040592 155 LGSHMYSH--VDAAYALFLRSRTAYGANG-TIRYSDDGYDRIWNPAVIGSGLNMVTSDALFID---VNVEDEPPQAVMQN 228 (350)
Q Consensus 155 l~~~~y~~--~~~~~aL~~~~R~n~G~~~-~vrypdD~~dR~W~~d~~~~~~~~~~s~~~~i~---~~~~~~~P~~V~~T 228 (350)
||+++|+. ...+.+|++++|+|||+.. .+|||+|+|||+|.++.....|..+. ++..|+ ..++|.||++||||
T Consensus 161 lp~~ly~~~~~~~s~~L~~~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~is-t~~~i~~~~~~~~~~~P~~V~~T 239 (347)
T PF12819_consen 161 LPDSLYPDTDANSSQALETVYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNIS-TTSNININSSNNPYDAPSAVYQT 239 (347)
T ss_pred CCccceeccccCCCceeEEEEeecCCCcccccCCCCCcceeeccccccCccccccc-cceeeecccCCccCcChHHHHHh
Confidence 99999953 3567899999999999863 59999999999999864333455553 334453 45689999999999
Q ss_pred hhccCCCCcceEEEEecCCCCccEEEEEEEeeeeecC-CCCeEEEEEEECCeecCCCCcCccCeeeeE-----EEeeecC
Q 040592 229 AITASTASQSIALGTNFPTEKVPIYITMYFSEVTELD-STQKRAFQFRINNKPDSDTIVPPYGKVTEL-----YVSNMTA 302 (350)
Q Consensus 229 A~~~~n~s~~~~~~~~~~~~~~~y~v~lhFaEi~~~~-~~~~R~F~I~iNg~~~~~~~~p~y~~~~~~-----~~~~~~~ 302 (350)
|+++.+.+.+++++|.++..+.+||||||||||+.+. ..++|+|+|||||+.+.++++|.+.....+ +++.+..
T Consensus 240 A~~~~~~s~~~nltw~~~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 319 (347)
T PF12819_consen 240 ARTPSNSSDPLNLTWSFVDPGFSYYVRLHFAEIQSLSPNNNQREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNVPD 319 (347)
T ss_pred hhcccccccceEEEeccCCCCccEEEEEEEeecccccCCCCeEEEEEEECCeEccCccCcccccCcceEeecceEEEecC
Confidence 9999988777999999943488999999999999764 455899999999999877888766544332 2344455
Q ss_pred CccEEEEEecCCCCCCCccceeEEEEEe
Q 040592 303 SSNTSFSLVPTADSTLPPLINAMEVFTV 330 (350)
Q Consensus 303 ~~~~~isl~~t~~S~lppiLNalEI~~~ 330 (350)
++.++|+|+|+++|+|||||||||||+|
T Consensus 320 ~~~~~isL~~t~~S~lppiLNalEIy~v 347 (347)
T PF12819_consen 320 SGFLNISLGPTPDSTLPPILNALEIYKV 347 (347)
T ss_pred CCEEEEEEEeCCCCCcCceeEeeeeEeC
Confidence 5689999999999999999999999996
|
This entry represents a malectin-like domain found in a number of plant receptor kinases. |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 350 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 48/324 (14%), Positives = 98/324 (30%), Gaps = 93/324 (28%)
Query: 23 ENSIAWIG------DDDLI---QNGESKVVQSGNALSD---------DHVMSTLRVF--S 62
+ I W+ + ++ Q ++ + + SD + + LR S
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 63 TRKKNCYTIL----------ASKGG-QVLV--RASFNYGNYDKKSSPPSFDLHFDGNLWA 109
+NC +L A ++L+ R D S+ + + D +
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR---FKQVTDFLSAATTTHISLDHHSMT 297
Query: 110 TVKTSSEGLVYYEAIYV-VKGDSISVCVAQTNPNQLPFISAIEVRSLGSHMYSHVDAAYA 168
+ L+ Y+ + + V TNP +L I+ +R + D
Sbjct: 298 LTPDEVKSLL---LKYLDCRPQDLPREVLTTNPRRLSIIAE-SIR----DGLATWD---- 345
Query: 169 LFLRSRTAYGANGTIRYSDDGYDRIWNPAVIGSGLNMVTSD-------ALFI---DVNV- 217
+ D++ +I S LN++ L + ++
Sbjct: 346 ---------------NWKHVNCDKLTT--IIESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388
Query: 218 --------EDEPPQAVMQNAITASTASQSIALGTNFPTEKVPIYITMYFSEVTELDSTQK 269
D VM + S+ + I ++Y +L++
Sbjct: 389 TILLSLIWFDVIKSDVMV--VVNKLHKYSLVEK-QPKESTISIP-SIYLELKVKLENEYA 444
Query: 270 --RAF--QFRINNKPDSDTIVPPY 289
R+ + I DSD ++PPY
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPY 468
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 350 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 99.86 | |
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 99.79 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-22 Score=177.17 Aligned_cols=145 Identities=12% Similarity=0.121 Sum_probs=99.6
Q ss_pred EEEEeeecCCCCcccCCCCCCCccccCCCCCCCceeeecccEEeccCCCCCchHHHHHHhhccCCCCcceEEEEecCCC-
Q 040592 170 FLRSRTAYGANGTIRYSDDGYDRIWNPAVIGSGLNMVTSDALFIDVNVEDEPPQAVMQNAITASTASQSIALGTNFPTE- 248 (350)
Q Consensus 170 ~~~~R~n~G~~~~vrypdD~~dR~W~~d~~~~~~~~~~s~~~~i~~~~~~~~P~~V~~TA~~~~n~s~~~~~~~~~~~~- 248 (350)
++++|+||||+.. . |..+|.|.+|..+............+.......+|..||||||.... +++|.+++.
T Consensus 5 ~~~~~INcGg~~~-~---d~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~-----~~tY~f~v~~ 75 (174)
T 2jwp_A 5 KVIWAVNAGGESH-V---DVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED-----SFGYDIPIKE 75 (174)
T ss_dssp HEEEEEEETSSSE-E---ETTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS-----CEEEEEECCS
T ss_pred cEEEEEECCCCCc-c---CCCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC-----CeEEEEEeCC
Confidence 4789999999873 2 56899999996642111110000011111235678999999998643 478999887
Q ss_pred CccEEEEEEEeeeeecCCCCeEEEEEEECCeecCCCCc---------CccCeeeeEEEeee------------cCCccEE
Q 040592 249 KVPIYITMYFSEVTELDSTQKRAFQFRINNKPDSDTIV---------PPYGKVTELYVSNM------------TASSNTS 307 (350)
Q Consensus 249 ~~~y~v~lhFaEi~~~~~~~~R~F~I~iNg~~~~~~~~---------p~y~~~~~~~~~~~------------~~~~~~~ 307 (350)
+..|+|||||||+.. +..++|+|+|+|||+.+.+++. |.+++ +...+ ...+.|+
T Consensus 76 ~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~----~~~~v~~~~l~i~~~~~~~~g~L~ 150 (174)
T 2jwp_A 76 EGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEI----IPISIKKGKLSVQGEVSTFTGKLS 150 (174)
T ss_dssp CEEEEEEEEEECCSC-CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEE----EEEEEETTEEEETTEEEECCSEEE
T ss_pred CeEEEEEEEEecccc-CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEE----EEEEEecCceeeeeeecccCCeEE
Confidence 689999999999984 5578999999999998765432 22221 21121 2457899
Q ss_pred EEEecCCCCCCCccceeEEEEEe
Q 040592 308 FSLVPTADSTLPPLINAMEVFTV 330 (350)
Q Consensus 308 isl~~t~~S~lppiLNalEI~~~ 330 (350)
|+++|.. .-.|+|||+||++-
T Consensus 151 I~f~p~~--~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 151 VEFVKGY--YDNPKVCALFIMKG 171 (174)
T ss_dssp EEEECSS--SCSSSEEEEEEESS
T ss_pred EEEeccC--CCCcEEEEEEEEeC
Confidence 9999753 34699999999975
|
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 350 | |||
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 95.68 | |
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 94.65 |
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: YxiM N-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=95.68 E-value=0.021 Score=45.86 Aligned_cols=81 Identities=6% Similarity=-0.018 Sum_probs=51.3
Q ss_pred EEEecCCCCccEEEEEEEeeeeecCCCCeEEEEEEECCeecCCCCcCccCeeeeEEEeeecCCccEEEEEecCCCCCCCc
Q 040592 241 LGTNFPTEKVPIYITMYFSEVTELDSTQKRAFQFRINNKPDSDTIVPPYGKVTELYVSNMTASSNTSFSLVPTADSTLPP 320 (350)
Q Consensus 241 ~~~~~~~~~~~y~v~lhFaEi~~~~~~~~R~F~I~iNg~~~~~~~~p~y~~~~~~~~~~~~~~~~~~isl~~t~~S~lpp 320 (350)
..|.+++++..|-|.++|.|.. ..++.+.|........+.+... .+.+.+ ..|+|+|.+.... ....|
T Consensus 65 ~~f~v~vPnG~Y~Vtv~~Gd~~--------~~~~~~eg~~~~~~~~g~~~~~--~~~V~V-tDG~L~l~ft~~~-~G~~~ 132 (146)
T d2o14a1 65 NTFNVDLPNGLYEVKVTLGNTA--------RASVAAEGVFQVINMTGDGAED--TFQIPV-TDGQLNLLVTEGK-AGTAF 132 (146)
T ss_dssp CCEEEECCSEEEEEEEEESSCS--------EEEEEETTEEEEEEEESTTCEE--EEEEEE-CSSEEEEEEEESS-TTSCC
T ss_pred ceEEEECCCCeEEEEEEEecCC--------CccEEEeeEEeccccCCccEEE--EEEEEE-ECCeEEEEEecCC-CCCcc
Confidence 3577777788999999999833 2456667765433332333221 133344 3578888775432 23358
Q ss_pred cceeEEEEEeecC
Q 040592 321 LINAMEVFTVSDQ 333 (350)
Q Consensus 321 iLNalEI~~~~~~ 333 (350)
.||+|||-++.+.
T Consensus 133 ~in~l~I~~~~d~ 145 (146)
T d2o14a1 133 TLSALKIKKLSDQ 145 (146)
T ss_dssp EEEEEEEEEEESS
T ss_pred EEEEEEEEecccC
Confidence 9999999999764
|
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|