Query 040598
Match_columns 264
No_of_seqs 150 out of 1100
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 15:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040598.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040598hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 6.5E-54 2.2E-58 395.9 25.9 258 1-264 6-288 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 1.4E-51 5E-56 378.4 22.6 256 1-264 3-275 (421)
3 2xr7_A Malonyltransferase; xen 100.0 7.7E-48 2.6E-52 356.6 13.7 260 2-264 1-303 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 1.8E-45 6E-50 340.9 18.6 254 2-264 6-301 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 8.1E-40 2.8E-44 302.5 19.0 239 24-264 5-292 (451)
6 1q9j_A PAPA5, polyketide synth 97.0 0.0062 2.1E-07 54.2 11.4 205 22-250 6-252 (422)
7 2jgp_A Tyrocidine synthetase 3 94.5 0.95 3.2E-05 41.2 14.6 208 22-252 95-346 (520)
8 1l5a_A Amide synthase, VIBH; n 93.3 0.042 1.4E-06 49.0 2.9 180 56-252 34-251 (436)
9 4hvm_A Tlmii; PSI-biology, mid 92.7 0.18 6.2E-06 45.8 6.3 205 22-250 12-258 (493)
10 2vsq_A Surfactin synthetase su 91.1 1.6 5.6E-05 44.8 11.9 182 56-251 48-270 (1304)
11 2xhg_A Tyrocidine synthetase A 88.1 5.6 0.00019 35.3 11.8 212 22-251 16-276 (466)
12 2xl1_A Arginine attenuator pep 71.0 2.6 8.8E-05 21.2 1.8 19 231-249 6-24 (26)
13 3fot_A 15-O-acetyltransferase; 66.0 16 0.00055 33.6 7.5 45 206-250 277-321 (519)
14 1x93_A Hypothetical protein HP 64.9 9 0.00031 23.1 3.6 40 207-253 2-41 (55)
15 2k1o_A Putative; repressor, tr 62.2 22 0.00076 22.2 5.2 43 205-254 14-56 (66)
16 3cla_A Type III chloramphenico 27.1 19 0.00066 28.8 1.0 24 56-79 50-73 (213)
17 2i9d_A Chloramphenicol acetylt 26.0 21 0.00071 28.8 1.0 23 57-79 53-75 (217)
18 1q23_A Chloramphenicol acetylt 24.8 23 0.00077 28.6 1.0 23 57-79 56-78 (219)
19 2kke_A Uncharacterized protein 23.8 1.1E+02 0.0039 17.7 4.0 32 209-248 16-47 (53)
20 4hhu_A OR280; engineered prote 23.1 49 0.0017 23.9 2.4 47 31-85 76-127 (170)
21 2kl8_A OR15; structural genomi 21.2 52 0.0018 21.0 1.9 31 56-86 11-46 (85)
22 3b8k_A PDCE2;, dihydrolipoylly 21.2 29 0.001 28.3 1.0 24 56-79 68-91 (239)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=6.5e-54 Score=395.91 Aligned_cols=258 Identities=21% Similarity=0.299 Sum_probs=210.5
Q ss_pred CeEEEEeeEEeeCCCCCCCCCccccCCcccccCCCCCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec-
Q 040598 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR- 79 (264)
Q Consensus 1 ~~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~~~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~- 79 (264)
|+|+|.++++|+|+.|||.+ .++||+||+++++.|++.+|||+.++. +....+++||+||+++|++||||||||+
T Consensus 6 ~~V~i~~~~~V~P~~~tp~~--~~~LS~lD~~~~~~~~~~~~~y~~~~~--~~~~~~~~Lk~sLs~~L~~f~plAGRl~~ 81 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPGR--NLWNSNVDLVVPNFHTPSVYFYRPTGS--SNFFDAKVLKDALSRALVPFYPMAGRLKR 81 (439)
T ss_dssp CCEEEEEEEEECCSSCCCCC--EECCCHHHHSCCTTCCCEEEEECCCSC--TTTTCHHHHHHHHHHHTTTTGGGGCEEEE
T ss_pred eEEEEeeeEEEeCCCCCCCC--eecCChhHhCccccceeeEEEEcCCCC--ccccHHHHHHHHHHHHHhhccccceeeee
Confidence 68999999999999999864 599999999988899999999997543 2345789999999999999999999997
Q ss_pred ---CceEEecCCCCcceEEEEeeeehhhhcCCCChhhhcccCCCCCCCCCCCCCCCCeeEEEEeEeecCcEEEEEeeeee
Q 040598 80 ---ENLIINDYDEGVPYIETRVNTHLFEFLQNPPMELLDQCLPYAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHK 156 (264)
Q Consensus 80 ---~~~~i~c~~~Gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~ 156 (264)
|+++|+||++||.|+||+++.+++|+.+......+++|+|..+.. ....+.|++.||||+|+|||++||+++||.
T Consensus 82 ~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~--~~~~~~pll~vQvT~f~cGG~~lg~~~~H~ 159 (439)
T 4g22_A 82 DEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYS--QGISSYALLVLQVTYFKCGGVSLGVGMRHH 159 (439)
T ss_dssp CTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTT--SCTTSSCSEEEEEEECTTSCEEEEEEECTT
T ss_pred CCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc--cccccCceeEEEEEEecCCCEEEEEEeeec
Confidence 589999999999999999999999997632233456788865431 224568999999999999999999999999
Q ss_pred ecccccccc---------cCCCCccCCccCccccCCCCCC--CCCCCCCccccc----c----ccc-CceeEEEEEeCHH
Q 040598 157 FIDGATASA---------CHEAVTSKNLSEASIIFPPQNP--SPNHHLSVMEKI----W----FRE-AKSKTRRFVFDAK 216 (264)
Q Consensus 157 v~Dg~~~~~---------rg~~~~~~P~~dr~~l~~~~~~--~~~~p~~~~~~~----~----~~~-~~~~~~~f~fs~~ 216 (264)
++||.|+++ ||.+....|++||+.+.+...+ ..+|.+|..+.. . ... .+++.++|+|+++
T Consensus 160 v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~ 239 (439)
T 4g22_A 160 AADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTRE 239 (439)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHH
Confidence 999999998 8876677899999877532111 113444431110 0 112 5789999999999
Q ss_pred HHHHHHHhccCCC-CCCCChhHHHHHHHHHHHHHHhCCCCCCCceeecC
Q 040598 217 AIASLRSECKGER-VPNPTRIEALSAFILKSAMLASRSTANSRFVLHQA 264 (264)
Q Consensus 217 ~i~~LK~~~~~~~-~~~~St~dal~A~iW~~~~rAr~~~~~~~~~~~~~ 264 (264)
+|++||+.+.++. ..++||||+|+||+|||++|||++++++.+.|.+|
T Consensus 240 ~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~ 288 (439)
T 4g22_A 240 QISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIA 288 (439)
T ss_dssp HHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred HHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEE
Confidence 9999999998653 46899999999999999999999998998888764
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.4e-51 Score=378.35 Aligned_cols=256 Identities=36% Similarity=0.510 Sum_probs=207.8
Q ss_pred CeEEEEeeEEeeCCCCCCCCCccccCCcccccCCCCCccEEEEecCCCCC-CCchhhHHHHHHHHHhhccccCCccceec
Q 040598 1 MGISIVSKEVVRPSSLDVHLLKPFKISLLDQLTPTTFSPLILFYPMRNTH-LKGTQISTQLKESLSKTLDPLYPFAARVR 79 (264)
Q Consensus 1 ~~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~~~y~~~i~~f~~~~~~-~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~ 79 (264)
|+|++.++++|+|+.|||.+.+.++||+||+++++.|++.+|||+.++.. .+...++++||+||+++|++||||||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 68999999999999999876578999999998878999999999975432 13457899999999999999999999999
Q ss_pred CceEEecCCCCcceEEEEeeeehhhhcCC-CChhhhcccCCCCCCCCC-CCCCCCCeeEEEEeEeecCcEEEEEeeeeee
Q 040598 80 ENLIINDYDEGVPYIETRVNTHLFEFLQN-PPMELLDQCLPYAPFSYQ-PNPDQVPHAAVQLNTFDCGGIALGLCLSHKF 157 (264)
Q Consensus 80 ~~~~i~c~~~Gv~f~~a~~~~~l~~l~~~-p~~~~~~~l~p~~~~~~~-~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~v 157 (264)
++++|+||++||.|+||+++.+++|+.+. |....++.|+|....... ....+.|++.+|||+|+|||++||+++||.+
T Consensus 83 ~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v 162 (421)
T 2bgh_A 83 VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKI 162 (421)
T ss_dssp TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEe
Confidence 88999999999999999999999999875 655556788886521000 0034689999999999999999999999999
Q ss_pred cccccccc---------cCCCCccCCccCc-cccCCC-CCCCCCCCCCcccccccccCceeEEEEEeCHHHHHHHHHhcc
Q 040598 158 IDGATASA---------CHEAVTSKNLSEA-SIIFPP-QNPSPNHHLSVMEKIWFREAKSKTRRFVFDAKAIASLRSECK 226 (264)
Q Consensus 158 ~Dg~~~~~---------rg~~~~~~P~~dr-~~l~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~~~ 226 (264)
+||.|+++ ||......|++|| +.+.++ ++. |. + .+....+++.++|+|++++|++||+.+.
T Consensus 163 ~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~----~~---~-~~~~~~~~~~~~f~f~~~~i~~LK~~a~ 234 (421)
T 2bgh_A 163 ADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNT----PS---P-ELVPDENVVMKRFVFDKEKIGALRAQAS 234 (421)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTC----CC---C-CCCCCSSEEEEEEEECHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccC----CC---C-ccCCccceEEEEEEECHHHHHHHHHHhh
Confidence 99999999 7764346799999 777765 332 11 1 1223467889999999999999999998
Q ss_pred CCCC-CCCChhHHHHHHHHHHHHHHhCCC--CCCCceeecC
Q 040598 227 GERV-PNPTRIEALSAFILKSAMLASRST--ANSRFVLHQA 264 (264)
Q Consensus 227 ~~~~-~~~St~dal~A~iW~~~~rAr~~~--~~~~~~~~~~ 264 (264)
++.. .++||||+|+||+|+|++|||+.. +++.+.|.++
T Consensus 235 ~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~ 275 (421)
T 2bgh_A 235 SASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQA 275 (421)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEE
T ss_pred ccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEE
Confidence 6543 689999999999999999999753 5667777653
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=7.7e-48 Score=356.57 Aligned_cols=260 Identities=18% Similarity=0.161 Sum_probs=199.2
Q ss_pred eEEEEeeEEeeCCCCCCCCCccccCCcccccCC-CCCccEEEEecCCCCCCC--chhhHHHHHHHHHhhccccCCcccee
Q 040598 2 GISIVSKEVVRPSSLDVHLLKPFKISLLDQLTP-TTFSPLILFYPMRNTHLK--GTQISTQLKESLSKTLDPLYPFAARV 78 (264)
Q Consensus 2 ~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~-~~y~~~i~~f~~~~~~~~--~~~~~~~Lk~sL~~~L~~~p~lAGrl 78 (264)
+|+|.++++|+|+.+++.+ +.++||+||+++. ..|++.+|||+.++.. + .++++++||+||+++|++||||||||
T Consensus 1 ~v~v~~~~~V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 78 (453)
T 2xr7_A 1 MASVIEQCQVVPSPGSATE-LTLPLTYFDHVWLAFHRMRRILFYKLPISR-PDFVQTIIPTLKDSLSLTLKYYLPLAGNV 78 (453)
T ss_dssp -CEEEEESCCCCCTTCCSE-EEEECCHHHHGGGGSCCEEEEEEEECCCCS-HHHHHTHHHHHHHHHHHHHTTSGGGGSCC
T ss_pred CeEEEEEEEecCCCCCCCC-ceECCCHHHhhhhhcCCccEEEEEeCCCCC-chhHHHHHHHHHHHHHHHhhhccccCeeE
Confidence 3899999999999875433 6799999999744 4699999999975431 2 34679999999999999999999999
Q ss_pred c------CceEEecC-CCCcceEEEEeeeehhhhcC-C-CChhhhcccCCCCCCCCCC--CCCCCCeeEEEEeEeecCcE
Q 040598 79 R------ENLIINDY-DEGVPYIETRVNTHLFEFLQ-N-PPMELLDQCLPYAPFSYQP--NPDQVPHAAVQLNTFDCGGI 147 (264)
Q Consensus 79 ~------~~~~i~c~-~~Gv~f~~a~~~~~l~~l~~-~-p~~~~~~~l~p~~~~~~~~--~~~~~Pll~vQvt~f~cGG~ 147 (264)
+ |+++|+|| ++||.|+||+++.+++++.. . +....+..|+|..+... . ...+.|++.+|||+|+|||+
T Consensus 79 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~-~~~~~~~~pll~vQvT~f~cGG~ 157 (453)
T 2xr7_A 79 ACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPK-DAPGVQLAPVLAIQVTLFPNHGI 157 (453)
T ss_dssp EEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCE-EETTEEECCCEEEEEEEETTTEE
T ss_pred EccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcc-cccccccCCeEEEEEEEccCCcE
Confidence 4 48999999 49999999999999999975 2 23445567888653210 0 01128999999999999999
Q ss_pred EEEEeeeeeecccccccc---------c-CC-C----CccCCccCccccCCCCCCCCCC-CCCcc-ccc-c----cccCc
Q 040598 148 ALGLCLSHKFIDGATASA---------C-HE-A----VTSKNLSEASIIFPPQNPSPNH-HLSVM-EKI-W----FREAK 205 (264)
Q Consensus 148 ~lg~~~~H~v~Dg~~~~~---------r-g~-~----~~~~P~~dr~~l~~~~~~~~~~-p~~~~-~~~-~----~~~~~ 205 (264)
+||+++||.++||.|+++ | |. . ....|++||+.+.+|......+ ..+.. +.. . ....+
T Consensus 158 ~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (453)
T 2xr7_A 158 SIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPD 237 (453)
T ss_dssp EEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCS
T ss_pred EEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCC
Confidence 999999999999999999 7 76 2 2456999999877543210000 01100 100 0 12346
Q ss_pred eeEEEEEeCHHHHHHHHHhccCCCC--CCCChhHHHHHHHHHHHHHHhCC-----CCCCCceeecC
Q 040598 206 SKTRRFVFDAKAIASLRSECKGERV--PNPTRIEALSAFILKSAMLASRS-----TANSRFVLHQA 264 (264)
Q Consensus 206 ~~~~~f~fs~~~i~~LK~~~~~~~~--~~~St~dal~A~iW~~~~rAr~~-----~~~~~~~~~~~ 264 (264)
++.++|+|++++|++||+.+.++.. .++||||+|+||+|||++|||++ ++++.+.|.++
T Consensus 238 ~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~ 303 (453)
T 2xr7_A 238 KVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCA 303 (453)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEE
T ss_pred ceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEE
Confidence 7789999999999999999975432 68999999999999999999986 67777877653
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.8e-45 Score=340.90 Aligned_cols=254 Identities=17% Similarity=0.218 Sum_probs=194.0
Q ss_pred eEEEEeeEEeeCCCCCCCCCccccCCcccccCC-CCCccEEEEecCCCCCCC--chhhHHHHHHHHHhhccccCCcccee
Q 040598 2 GISIVSKEVVRPSSLDVHLLKPFKISLLDQLTP-TTFSPLILFYPMRNTHLK--GTQISTQLKESLSKTLDPLYPFAARV 78 (264)
Q Consensus 2 ~v~i~~~~~V~P~~~~p~~~~~~~LS~lD~~~~-~~y~~~i~~f~~~~~~~~--~~~~~~~Lk~sL~~~L~~~p~lAGrl 78 (264)
+|+|.++++|+|+.+++.+ +.++||+||+.+. ..|++.+|||+.++.. + .++++++||+||+++|++||||||||
T Consensus 6 ~v~v~~~~~V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 83 (454)
T 2e1v_A 6 ILTVLEQSQVSPPPDTLGD-KSLQLTFFDFFWLRSPPINNLFFYELPITR-SQFTETVVPNIKHSLSITLKHFYPFVGKL 83 (454)
T ss_dssp CEEEEEEEEECCCTTSCCC-EEEECCHHHHTTTTCCCEEEEEEEECCCCH-HHHHHTHHHHHHHHHHHHHTTCGGGGSEE
T ss_pred eEEEEEEEEEeCCCCCCCC-ceecCchHHhhhhccCCccEEEEEeCCCCc-chhhHHHHHHHHHHHHHHhhhccccceee
Confidence 6999999999999875433 6799999999854 4699999999975421 1 34679999999999999999999999
Q ss_pred c--C----ceEEecC-CCCcceEEEEeeeehhhhcC-CC-ChhhhcccCCCCCCCCC-CCCCCCCeeEEEEeEeecCcEE
Q 040598 79 R--E----NLIINDY-DEGVPYIETRVNTHLFEFLQ-NP-PMELLDQCLPYAPFSYQ-PNPDQVPHAAVQLNTFDCGGIA 148 (264)
Q Consensus 79 ~--~----~~~i~c~-~~Gv~f~~a~~~~~l~~l~~-~p-~~~~~~~l~p~~~~~~~-~~~~~~Pll~vQvt~f~cGG~~ 148 (264)
+ + +++|+|| ++||.|+||+++.+++++.. .+ ....+..|+|..+.... ....+.|++.||||+|+|||++
T Consensus 84 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~ 163 (454)
T 2e1v_A 84 VVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIA 163 (454)
T ss_dssp EECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEE
T ss_pred eeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEE
Confidence 6 2 7999999 49999999999999999965 22 23345678886532100 0113459999999999999999
Q ss_pred EEEeeeeeecccccccc---------c-CCC-C-----ccCCccCccccCCCCCCCCCCC---CCcc--------ccccc
Q 040598 149 LGLCLSHKFIDGATASA---------C-HEA-V-----TSKNLSEASIIFPPQNPSPNHH---LSVM--------EKIWF 201 (264)
Q Consensus 149 lg~~~~H~v~Dg~~~~~---------r-g~~-~-----~~~P~~dr~~l~~~~~~~~~~p---~~~~--------~~~~~ 201 (264)
||+++||.++||.|+++ | |.. . ...|++|| .+..|. + .++ .+.. +....
T Consensus 164 lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~--~-~~~~~~~~~~~~~~~~~~~~~~~ 239 (454)
T 2e1v_A 164 IGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPM--L-DEAYLKRAKVESFNEDYVTQSLA 239 (454)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHH--H-HHHHHHHTTCTTHHHHCCCCCCC
T ss_pred EEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCC--c-chHHHHhhhccccccccCcccCC
Confidence 99999999999999999 7 753 1 45689999 553211 0 000 0000 00000
Q ss_pred ccCceeEEEEEeCHHHHHHHHHhccCCCC--CCCChhHHHHHHHHHHHHHHhCCCCCCCceeecC
Q 040598 202 REAKSKTRRFVFDAKAIASLRSECKGERV--PNPTRIEALSAFILKSAMLASRSTANSRFVLHQA 264 (264)
Q Consensus 202 ~~~~~~~~~f~fs~~~i~~LK~~~~~~~~--~~~St~dal~A~iW~~~~rAr~~~~~~~~~~~~~ 264 (264)
...+.+.++|+|++++|++||+.+.++.. .++||||+|+||+|||++||| +++.+.|.++
T Consensus 240 ~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~ 301 (454)
T 2e1v_A 240 GPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFP 301 (454)
T ss_dssp CCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEE
T ss_pred CCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEE
Confidence 23467899999999999999999975432 689999999999999999999 6777777653
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=8.1e-40 Score=302.54 Aligned_cols=239 Identities=18% Similarity=0.235 Sum_probs=174.5
Q ss_pred ccCCcccccC--CCCCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec---------CceEEecCCCCcc
Q 040598 24 FKISLLDQLT--PTTFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR---------ENLIINDYDEGVP 92 (264)
Q Consensus 24 ~~LS~lD~~~--~~~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~---------~~~~i~c~~~Gv~ 92 (264)
++||+|||++ ++.|++.+|||+.++.. +..+++++||+||+++|++||||||||+ |+++|+|++.++.
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~-~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSS-QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGG-GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred ccCChhhcCccccccceeEEEEEECCCCC-CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 6899999997 68999999999964321 3457899999999999999999999985 2689998877766
Q ss_pred eEEEEeee-----ehhhhcC--CCChhhh-cccCCCCCCCC---CCCCCCCCeeEEEEeEeecCcEEEEEeeeeeecccc
Q 040598 93 YIETRVNT-----HLFEFLQ--NPPMELL-DQCLPYAPFSY---QPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGA 161 (264)
Q Consensus 93 f~~a~~~~-----~l~~l~~--~p~~~~~-~~l~p~~~~~~---~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~ 161 (264)
|++++++. +++++.. .|..... ..+.|....+. .....+.|++.|||| |.|||++||+++||.++||.
T Consensus 84 ~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~Dg~ 162 (451)
T 2rkv_A 84 VVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAMDMV 162 (451)
T ss_dssp EEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTCCHH
T ss_pred EEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhccccHH
Confidence 99988764 6777764 3422111 12334321100 011345899999999 66999999999999999999
Q ss_pred cccc---------cCCCCc----cCCccCccccCCCCC---CC--CCCCCCcccc----cccccCceeEEEEEeCHHHHH
Q 040598 162 TASA---------CHEAVT----SKNLSEASIIFPPQN---PS--PNHHLSVMEK----IWFREAKSKTRRFVFDAKAIA 219 (264)
Q Consensus 162 ~~~~---------rg~~~~----~~P~~dr~~l~~~~~---~~--~~~p~~~~~~----~~~~~~~~~~~~f~fs~~~i~ 219 (264)
|+++ ||.+.. ..|++||+.+.+..+ +. .+|+++..+. ......+++.++|+|++++|+
T Consensus 163 g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~ 242 (451)
T 2rkv_A 163 GQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMS 242 (451)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHHHH
Confidence 9999 786532 268999986654321 10 1233332111 112345688999999999999
Q ss_pred HHHHhccCCC---CCCCChhHHHHHHHHHHHHHHh-C-CCCCCCceeecC
Q 040598 220 SLRSECKGER---VPNPTRIEALSAFILKSAMLAS-R-STANSRFVLHQA 264 (264)
Q Consensus 220 ~LK~~~~~~~---~~~~St~dal~A~iW~~~~rAr-~-~~~~~~~~~~~~ 264 (264)
+||+.+.++. +.++||||+|+||+|||++||| . +++++.+.|.+|
T Consensus 243 ~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~ 292 (451)
T 2rkv_A 243 ELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRA 292 (451)
T ss_dssp HHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEE
T ss_pred HHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEE
Confidence 9999997653 3679999999999999999998 3 677888888764
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=96.97 E-value=0.0062 Score=54.19 Aligned_cols=205 Identities=12% Similarity=0.007 Sum_probs=108.3
Q ss_pred ccccCCcccccCC--CCCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec---Cc-eEEecCCCCcceEE
Q 040598 22 KPFKISLLDQLTP--TTFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR---EN-LIINDYDEGVPYIE 95 (264)
Q Consensus 22 ~~~~LS~lD~~~~--~~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~---~~-~~i~c~~~Gv~f~~ 95 (264)
..++||++++.+. .+.+...+-++.+ ...+.|++++.+++..+|.|--++. +. ..+........
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~-------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~--- 75 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGV-------IDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHS--- 75 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESC-------CCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSC---
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecC-------CCHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCC---
Confidence 4588998886432 2333444444432 2378999999999999999988874 11 11111111111
Q ss_pred EEeeeehhhhcCCCChhhhcccCCCCCCCCCCCCCCCCeeEEEEeEeecCcEEEEEeeeeeecccccccc---------c
Q 040598 96 TRVNTHLFEFLQNPPMELLDQCLPYAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASA---------C 166 (264)
Q Consensus 96 a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~---------r 166 (264)
.....++........... . ..++ + ...|++.+.+.. ..++..|.+.+||.++||.|+.. +
T Consensus 76 ---~~~~~d~~~~~~~~~~~~-~-~~~~---d--~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 76 ---GICVIDGTAATNGSPSGN-A-ELRL---D--QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp ---CCEEEC-------------C-CCCC---C--TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred ---ceEEEECCCCCcchhhhc-c-cCcc---C--CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 011112211100000100 0 0111 1 457888888877 77889999999999999999887 2
Q ss_pred -----CCCCccCC-cc-C--------ccccC---CC--CC--CCC--CCC-CCccccc--ccccCceeEEEEEeCHHHHH
Q 040598 167 -----HEAVTSKN-LS-E--------ASIIF---PP--QN--PSP--NHH-LSVMEKI--WFREAKSKTRRFVFDAKAIA 219 (264)
Q Consensus 167 -----g~~~~~~P-~~-d--------r~~l~---~~--~~--~~~--~~p-~~~~~~~--~~~~~~~~~~~f~fs~~~i~ 219 (264)
|.+...+| .+ + +.... .. +. .+. ..+ ....|.. ...........+.++.+..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~ 224 (422)
T 1q9j_A 145 DAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTS 224 (422)
T ss_dssp HHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHH
T ss_pred HhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHH
Confidence 32221111 11 1 00000 00 00 000 000 1111110 01122245678899999999
Q ss_pred HHHHhccCCCCCCCChhHHHHHHHHHHHHHH
Q 040598 220 SLRSECKGERVPNPTRIEALSAFILKSAMLA 250 (264)
Q Consensus 220 ~LK~~~~~~~~~~~St~dal~A~iW~~~~rA 250 (264)
+||+.|.. ..+|.+.++.|.+...+.|-
T Consensus 225 ~l~~~a~~---~~~t~~~~l~aa~~~~l~r~ 252 (422)
T 1q9j_A 225 DLMAFGRE---HRLSLNAVVAAAILLTEWQL 252 (422)
T ss_dssp HHHHHHTT---TTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---hCCCHHHHHHHHHHHHHHhc
Confidence 99999875 35889999988877777765
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=94.48 E-value=0.95 Score=41.25 Aligned_cols=208 Identities=9% Similarity=0.006 Sum_probs=109.9
Q ss_pred ccccCCcccccC-------C--CCC-ccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec---Cce-EEecC
Q 040598 22 KPFKISLLDQLT-------P--TTF-SPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR---ENL-IINDY 87 (264)
Q Consensus 22 ~~~~LS~lD~~~-------~--~~y-~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~---~~~-~i~c~ 87 (264)
..++||+.-+.+ + ..| +...+-++.. ...+.|++++.+++..++.|--++. |++ .+...
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~-------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~ 167 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK-------LERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHE 167 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC-------CCHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECS
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC-------CCHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECC
Confidence 458888765421 1 233 4445545432 2388999999999999999988774 221 11111
Q ss_pred CCCcceEEEEeeeehhhhcCCCChhhhcccCCCCCCCCCCCCCCCCeeEEEEeEeecCcEEEEEeeeeeecccccccc--
Q 040598 88 DEGVPYIETRVNTHLFEFLQNPPMELLDQCLPYAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASA-- 165 (264)
Q Consensus 88 ~~Gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~-- 165 (264)
+....+... +.+-+++.. .....-.+ + + ....|++.+.+-....+...|-+.+||.++||.|+..
T Consensus 168 ~~~~~~~~~--~~~~~~~~~------~~~~~~~~-f---d-l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~ 234 (520)
T 2jgp_A 168 DVPFALAYS--EVTEEEARE------LVSSLVQP-F---D-LEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILL 234 (520)
T ss_dssp CCCCCCEEE--ECCHHHHHH------HHHHTCCC-C---C-TTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHH
T ss_pred CCCCceEEE--eCCHHHHHH------HHHHhcCC-C---C-CCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHH
Confidence 111111111 111111110 10111111 1 1 3356888887766666789999999999999999887
Q ss_pred -------cCCCCccCC-cc-C-----ccccCCCC---------CCCCCC-CCCccc----ccccccCceeEEEEEeCHHH
Q 040598 166 -------CHEAVTSKN-LS-E-----ASIIFPPQ---------NPSPNH-HLSVME----KIWFREAKSKTRRFVFDAKA 217 (264)
Q Consensus 166 -------rg~~~~~~P-~~-d-----r~~l~~~~---------~~~~~~-p~~~~~----~~~~~~~~~~~~~f~fs~~~ 217 (264)
+|......| .+ | +....... +.+... +....| .+...........+.++.+.
T Consensus 235 ~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~ 314 (520)
T 2jgp_A 235 AEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKAL 314 (520)
T ss_dssp HHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHH
T ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHH
Confidence 343211111 11 0 10000000 000000 111111 11111223456788999999
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHHHHHHHHHHhC
Q 040598 218 IASLRSECKGERVPNPTRIEALSAFILKSAMLASR 252 (264)
Q Consensus 218 i~~LK~~~~~~~~~~~St~dal~A~iW~~~~rAr~ 252 (264)
.++||+.+.. ..+|.+.++.|.+-..+.|-.+
T Consensus 315 ~~~l~~~a~~---~~~T~~~~l~aa~a~~L~~~~~ 346 (520)
T 2jgp_A 315 TEGLHQLAQA---TGTTLYMVLLAAYNVLLAKYAG 346 (520)
T ss_dssp HHHHHHHHHH---HTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC
Confidence 9999998864 3578888888876666665543
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=93.26 E-value=0.042 Score=49.02 Aligned_cols=180 Identities=12% Similarity=0.016 Sum_probs=97.1
Q ss_pred hHHHHHHHHHhhccccCCccceec--CceEEecCCCCcceEEEEeeeehhhhcCCCCh-h----hhcccCCCCCCCCCCC
Q 040598 56 ISTQLKESLSKTLDPLYPFAARVR--ENLIINDYDEGVPYIETRVNTHLFEFLQNPPM-E----LLDQCLPYAPFSYQPN 128 (264)
Q Consensus 56 ~~~~Lk~sL~~~L~~~p~lAGrl~--~~~~i~c~~~Gv~f~~a~~~~~l~~l~~~p~~-~----~~~~l~p~~~~~~~~~ 128 (264)
..+.|++++.+++..++.|--++. +. .+. ......+ .+.++...+.. . ......-.+ + +
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v~-~~~~~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~-f---d- 99 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARFSAQGE-LYW-HPFSPPI-------DYQDLSIHLEAEPLAWRQIEQDLQRS-S---T- 99 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTTCC-EEE-CSSCCCC-------EEEECTTCTTHHHHHHHHHHHHHTSC-C---C-
T ss_pred CHHHHHHHHHHHHHHhheeEEEEEecCC-eEC-CCcCCCc-------cEEeCCCCCCHHHHHHHHHHHHhcCC-C---C-
Confidence 378999999999999999988875 22 111 1111111 11122211110 0 011111111 1 1
Q ss_pred CCCCCeeEEEEeEeecCcEEEEEeeeeeecccccccc---------c----CCCCccC-CccC------ccccCCCC---
Q 040598 129 PDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASA---------C----HEAVTSK-NLSE------ASIIFPPQ--- 185 (264)
Q Consensus 129 ~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~---------r----g~~~~~~-P~~d------r~~l~~~~--- 185 (264)
....|++.+.+-....+...|.+.+||.++||.|+.. + |.....+ +.+. +..+....
T Consensus 100 l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (436)
T 1l5a_A 100 LIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQ 179 (436)
T ss_dssp CBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHHH
T ss_pred cCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHHH
Confidence 3356888887766667889999999999999999887 1 4332111 1110 00000000
Q ss_pred ------CCCCCCCC-Cccccc-ccccCceeEEEEEeCHHHHHHHHHhccCCCCCCCChhHHHHHHHHHHHHHHhC
Q 040598 186 ------NPSPNHHL-SVMEKI-WFREAKSKTRRFVFDAKAIASLRSECKGERVPNPTRIEALSAFILKSAMLASR 252 (264)
Q Consensus 186 ------~~~~~~p~-~~~~~~-~~~~~~~~~~~f~fs~~~i~~LK~~~~~~~~~~~St~dal~A~iW~~~~rAr~ 252 (264)
+.+...|. ...|.. ...........+.++.+..++|++.+... .+|.+.++.|.+-..+.|--+
T Consensus 180 ~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~L~~~~g 251 (436)
T 1l5a_A 180 DKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN---QIGWPDALVALCALYLESAEP 251 (436)
T ss_dssp HHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHhhC
Confidence 00000000 001111 11122345678899999999999998753 578888888876666655543
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=92.69 E-value=0.18 Score=45.81 Aligned_cols=205 Identities=10% Similarity=-0.011 Sum_probs=104.0
Q ss_pred ccccCCcccccC-------CCCCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec---CceEEecCCCCc
Q 040598 22 KPFKISLLDQLT-------PTTFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR---ENLIINDYDEGV 91 (264)
Q Consensus 22 ~~~~LS~lD~~~-------~~~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~---~~~~i~c~~~Gv 91 (264)
..++||++-+.+ +.......+.|+.... ...+.|++++.+++..++.|--++. +.+.+...+. +
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~~-~ 85 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR-----IDDDRLAAAADEVLDAFPLLRVNFVDDDGLWMRTRENA-D 85 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS-----CCHHHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSCC-C
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC-----CCHHHHHHHHHHHHHhchhceeEEEccCCEEEEecCCC-C
Confidence 458888876421 2111233334444332 3489999999999999999988875 2222111122 3
Q ss_pred ceEEEEeeeehhhhcCCCCh-hh----hcccCCCCCCCCCCCCCCCCeeEEEEeEeecCcEEEEEeeeeeecccccccc-
Q 040598 92 PYIETRVNTHLFEFLQNPPM-EL----LDQCLPYAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASA- 165 (264)
Q Consensus 92 ~f~~a~~~~~l~~l~~~p~~-~~----~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~- 165 (264)
.+.+. ++...+.. .. .......+ + + ....|++.+.+-....|...|.+.+||.++||.|+..
T Consensus 86 ~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~-f---d-l~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l 153 (493)
T 4hvm_A 86 ALVRS-------DLRGHPDPQARCVELLRADRDRP-T---D-PERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMV 153 (493)
T ss_dssp CEEEE-------ECTTSSSHHHHHHHHHHHHHSSC-C---C-TTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHH
T ss_pred CceEE-------ECCCCCchHHHHHHHHHHHhcCC-C---C-CCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHH
Confidence 33222 11111110 11 11111111 1 1 3356888887766666778999999999999999988
Q ss_pred --------cCCCCccCCccC-----cc--ccCCCC---------CCCCCCCCCcccccccccCceeEEEEEeCHHHHHHH
Q 040598 166 --------CHEAVTSKNLSE-----AS--IIFPPQ---------NPSPNHHLSVMEKIWFREAKSKTRRFVFDAKAIASL 221 (264)
Q Consensus 166 --------rg~~~~~~P~~d-----r~--~l~~~~---------~~~~~~p~~~~~~~~~~~~~~~~~~f~fs~~~i~~L 221 (264)
.|.... .+..| +. .+.... ..+...+.. ...+ .+........+.++.+..++|
T Consensus 154 ~~~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l-~~~~-~~~~~~~~~~~~l~~~~~~~l 230 (493)
T 4hvm_A 154 LGAVWQAYYGRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVR-GGDG-GPVGPPETSRLRVPGSRWQAL 230 (493)
T ss_dssp HHHHHHHHTTCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCC-C--------CCEEEEEEEEHHHHHHH
T ss_pred HHHHHHHhCCCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCC-CCCC-CCCCCCeeEEEEcCHHHHHHH
Confidence 343321 11111 11 010000 000000110 0000 011125667889999999999
Q ss_pred HHhccCCCCCCCC--hhHHHHHHHHHHHHHH
Q 040598 222 RSECKGERVPNPT--RIEALSAFILKSAMLA 250 (264)
Q Consensus 222 K~~~~~~~~~~~S--t~dal~A~iW~~~~rA 250 (264)
++.|.. ..+| .+.++.|.+-..+.+-
T Consensus 231 ~~~a~~---~~vt~~~~~~l~aa~a~~L~~~ 258 (493)
T 4hvm_A 231 TEPGGP---LGGNGSLAMAALTAWWLWTQGA 258 (493)
T ss_dssp HCC---------CHHHHHHHHHHHHHHHC--
T ss_pred HHHHHH---cCCCchHHHHHHHHHHHHHHHh
Confidence 998875 3577 8888888766666555
No 10
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=91.10 E-value=1.6 Score=44.77 Aligned_cols=182 Identities=9% Similarity=-0.047 Sum_probs=95.8
Q ss_pred hHHHHHHHHHhhccccCCccceec--C---ceEEecCCCCcceEEEEeeeehhhhcCCCCh---hhhcccCC---CCCCC
Q 040598 56 ISTQLKESLSKTLDPLYPFAARVR--E---NLIINDYDEGVPYIETRVNTHLFEFLQNPPM---ELLDQCLP---YAPFS 124 (264)
Q Consensus 56 ~~~~Lk~sL~~~L~~~p~lAGrl~--~---~~~i~c~~~Gv~f~~a~~~~~l~~l~~~p~~---~~~~~l~p---~~~~~ 124 (264)
..+.|++++.+++..++.|--++. + -..+...+....+ ...|+...+.. .....++- ..++
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~~~f- 119 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHI-------EEIDLTHLTGSEQTAKINEYKEQDKIRGF- 119 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCE-------EEEECTTSCHHHHHHHHHHHHHHHHHHCC-
T ss_pred CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCce-------EEEECCCCCchhHHHHHHHHHHHHhcCCC-
Confidence 488999999999999999877764 1 1122111111111 11122211110 00111110 0111
Q ss_pred CCCCCCCCCeeEEEEeEeecCcEEEEEeeeeeecccccccc-------------cCCCCccCC--cc-Ccc-ccCCCC--
Q 040598 125 YQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASA-------------CHEAVTSKN--LS-EAS-IIFPPQ-- 185 (264)
Q Consensus 125 ~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~-------------rg~~~~~~P--~~-dr~-~l~~~~-- 185 (264)
+ ....|++.+.+-+...+...|-+.+||.++||.|+.. .|.+...+| .+ |-. -+....
T Consensus 120 --d-l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~ 196 (1304)
T 2vsq_A 120 --D-LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQ 196 (1304)
T ss_dssp --C-TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHH
T ss_pred --C-CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhh
Confidence 1 3356899888877777889999999999999999887 132211111 11 100 000000
Q ss_pred -------CCCCCCCC-Ccccc---cccccCceeEEEEEeCHHHHHHHHHhccCCCCCCCChhHHHHHHHHHHHHHHh
Q 040598 186 -------NPSPNHHL-SVMEK---IWFREAKSKTRRFVFDAKAIASLRSECKGERVPNPTRIEALSAFILKSAMLAS 251 (264)
Q Consensus 186 -------~~~~~~p~-~~~~~---~~~~~~~~~~~~f~fs~~~i~~LK~~~~~~~~~~~St~dal~A~iW~~~~rAr 251 (264)
+.+...+. ...|. +...........|.++++..++||+.+... .+|.+.++.|-+-..+.|--
T Consensus 197 ~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~t 270 (1304)
T 2vsq_A 197 ASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRYQ 270 (1304)
T ss_dssp HHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhc
Confidence 00000000 00010 111122345667889999999999999753 57888888776665555543
No 11
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=88.05 E-value=5.6 Score=35.26 Aligned_cols=212 Identities=11% Similarity=0.031 Sum_probs=105.8
Q ss_pred ccccCCcccccC-----CC-CCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec---Cce-EEecCCCCc
Q 040598 22 KPFKISLLDQLT-----PT-TFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR---ENL-IINDYDEGV 91 (264)
Q Consensus 22 ~~~~LS~lD~~~-----~~-~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~---~~~-~i~c~~~Gv 91 (264)
..++||+..+++ +. ......+.|+.... ...+.|+++|.+++..++.|--++. +.+ .+.......
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~ 90 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG-----FDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQ 90 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC-----CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC-----CCHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccc
Confidence 468888876521 11 12233344444332 3488999999999999999988875 221 121111111
Q ss_pred ceEEEEeeeehhhhcCCCCh-hhhc---ccCCCCCCCCCCCCCCCCeeEEEEeEeecCcEEEEEeeeeeecccccccc--
Q 040598 92 PYIETRVNTHLFEFLQNPPM-ELLD---QCLPYAPFSYQPNPDQVPHAAVQLNTFDCGGIALGLCLSHKFIDGATASA-- 165 (264)
Q Consensus 92 ~f~~a~~~~~l~~l~~~p~~-~~~~---~l~p~~~~~~~~~~~~~Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~-- 165 (264)
.+..... ++...... .... ...-. ++ + ....|++.+.+-....+.. |-+.+||.++||.|+..
T Consensus 91 ~~~~~~~-----d~~~~~~~~~~~~~~~~~~~~-~f---d-l~~~pl~r~~l~~~~~~~~-l~l~~HH~i~Dg~S~~~l~ 159 (466)
T 2xhg_A 91 LYDFFSY-----NLTAQPDVQQAIEAETQRLHS-SM---N-LQEGPLVKVALFQTLHGDH-LFLAIHHLVVDGISWRILF 159 (466)
T ss_dssp CCEEEEE-----ECTTCSCHHHHHHHHHHHHHT-TC---C-TTTCCCEEEEEEEETTEEE-EEEEEEGGGCCHHHHHHHH
T ss_pred cceeEEE-----ecCCcccHHHHHHHHHHHHHh-cc---C-CCCCCeEEEEEEEcCCCCE-EEEEeeeeeechhhHHHHH
Confidence 1111111 11110100 0000 00101 11 1 3356888887766654444 67999999999999887
Q ss_pred -----------cCCCCccCC---cc-C-----ccccCCCC--CC-------CCCCCCCcccc----cccccCceeEEEEE
Q 040598 166 -----------CHEAVTSKN---LS-E-----ASIIFPPQ--NP-------SPNHHLSVMEK----IWFREAKSKTRRFV 212 (264)
Q Consensus 166 -----------rg~~~~~~P---~~-d-----r~~l~~~~--~~-------~~~~p~~~~~~----~~~~~~~~~~~~f~ 212 (264)
.|.....+| .+ | +..+.... .. +...+...+|. +...........+.
T Consensus 160 ~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~~ 239 (466)
T 2xhg_A 160 EDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRNMRIR 239 (466)
T ss_dssp HHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccccccccccccceEEEEE
Confidence 233211111 11 0 00000000 00 00000000110 01112234567889
Q ss_pred eCHHHHHHHHHhccCCCCCCCChhHHHHHHHHHHHHHHh
Q 040598 213 FDAKAIASLRSECKGERVPNPTRIEALSAFILKSAMLAS 251 (264)
Q Consensus 213 fs~~~i~~LK~~~~~~~~~~~St~dal~A~iW~~~~rAr 251 (264)
++.+..++|++.+... ..+|.++++.|-+-..+.+-.
T Consensus 240 l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~ 276 (466)
T 2xhg_A 240 LHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWS 276 (466)
T ss_dssp CCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999877532 257888888887766666654
No 12
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=71.04 E-value=2.6 Score=21.15 Aligned_cols=19 Identities=16% Similarity=0.045 Sum_probs=15.7
Q ss_pred CCCChhHHHHHHHHHHHHH
Q 040598 231 PNPTRIEALSAFILKSAML 249 (264)
Q Consensus 231 ~~~St~dal~A~iW~~~~r 249 (264)
+-+|+.|-|+-|+|++++.
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3467889999999999864
No 13
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=66.02 E-value=16 Score=33.60 Aligned_cols=45 Identities=13% Similarity=0.002 Sum_probs=34.6
Q ss_pred eeEEEEEeCHHHHHHHHHhccCCCCCCCChhHHHHHHHHHHHHHH
Q 040598 206 SKTRRFVFDAKAIASLRSECKGERVPNPTRIEALSAFILKSAMLA 250 (264)
Q Consensus 206 ~~~~~f~fs~~~i~~LK~~~~~~~~~~~St~dal~A~iW~~~~rA 250 (264)
-....+.|++++.++|++.|.+..+..+|-..+|.|.+=.++.+.
T Consensus 277 ~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~ 321 (519)
T 3fot_A 277 PRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDH 321 (519)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhh
Confidence 345678899999999999998654446888899977766666553
No 14
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=64.95 E-value=9 Score=23.09 Aligned_cols=40 Identities=18% Similarity=0.286 Sum_probs=30.0
Q ss_pred eEEEEEeCHHHHHHHHHhccCCCCCCCChhHHHHHHHHHHHHHHhCC
Q 040598 207 KTRRFVFDAKAIASLRSECKGERVPNPTRIEALSAFILKSAMLASRS 253 (264)
Q Consensus 207 ~~~~f~fs~~~i~~LK~~~~~~~~~~~St~dal~A~iW~~~~rAr~~ 253 (264)
....|+||.|+-+.|++.|.++ -|.+..+|=|.|.++...
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~lr~ 41 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE-------EESVGSYIKRYILKALRK 41 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT-------TSCTTHHHHHHHHHHHTC
T ss_pred ceEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 3567999999999999999865 344556777777777543
No 15
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=62.24 E-value=22 Score=22.19 Aligned_cols=43 Identities=14% Similarity=0.245 Sum_probs=34.9
Q ss_pred ceeEEEEEeCHHHHHHHHHhccCCCCCCCChhHHHHHHHHHHHHHHhCCC
Q 040598 205 KSKTRRFVFDAKAIASLRSECKGERVPNPTRIEALSAFILKSAMLASRST 254 (264)
Q Consensus 205 ~~~~~~f~fs~~~i~~LK~~~~~~~~~~~St~dal~A~iW~~~~rAr~~~ 254 (264)
......|+||.|+-+.|.+.|.++ -|.+..+|=|.|.++....
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~yk 56 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTIIYK 56 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHCSS
T ss_pred cceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHh
Confidence 345678999999999999999865 4668888999999987544
No 16
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=27.15 E-value=19 Score=28.84 Aligned_cols=24 Identities=0% Similarity=0.113 Sum_probs=20.1
Q ss_pred hHHHHHHHHHhhccccCCccceec
Q 040598 56 ISTQLKESLSKTLDPLYPFAARVR 79 (264)
Q Consensus 56 ~~~~Lk~sL~~~L~~~p~lAGrl~ 79 (264)
...-+-.+++++|..+|.+-.++.
T Consensus 50 ~~~~~ikAv~~Al~~~P~~Na~~~ 73 (213)
T 3cla_A 50 FYPVMIYLIAQAVNQFDELRMAIK 73 (213)
T ss_dssp HHHHHHHHHHHHHTTCGGGSEEEE
T ss_pred HHHHHHHHHHHHHhhCHHhhEEEE
Confidence 355677899999999999988886
No 17
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=26.04 E-value=21 Score=28.78 Aligned_cols=23 Identities=9% Similarity=0.115 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhccccCCccceec
Q 040598 57 STQLKESLSKTLDPLYPFAARVR 79 (264)
Q Consensus 57 ~~~Lk~sL~~~L~~~p~lAGrl~ 79 (264)
...+-.+++++|..+|.+-.++.
T Consensus 53 ~~~~ikAv~~Al~~~P~~n~~~~ 75 (217)
T 2i9d_A 53 FLHYLYAVLRAANEIPEFRYRID 75 (217)
T ss_dssp HHHHHHHHHHHHHHSGGGGEEEC
T ss_pred HHHHHHHHHHHHHhCHHhheEEc
Confidence 44567789999999999988876
No 18
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=24.80 E-value=23 Score=28.58 Aligned_cols=23 Identities=9% Similarity=0.179 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhccccCCccceec
Q 040598 57 STQLKESLSKTLDPLYPFAARVR 79 (264)
Q Consensus 57 ~~~Lk~sL~~~L~~~p~lAGrl~ 79 (264)
..-+-.+++++|..+|.+-.++.
T Consensus 56 ~~~~ikAv~~Al~~~P~~Na~~~ 78 (219)
T 1q23_A 56 YPAFIHILARLMNAHPEFRMAMK 78 (219)
T ss_dssp HHHHHHHHHHHHTTCGGGSEEEE
T ss_pred HHHHHHHHHHHHHhChHhhEEEE
Confidence 44567799999999999998886
No 19
>2kke_A Uncharacterized protein; protein northeast structural genomics consortium (NESG), target TR5, PSI-2; NMR {Methanothermobacter thermautotrophicusstr}
Probab=23.82 E-value=1.1e+02 Score=17.68 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=23.0
Q ss_pred EEEEeCHHHHHHHHHhccCCCCCCCChhHHHHHHHHHHHH
Q 040598 209 RRFVFDAKAIASLRSECKGERVPNPTRIEALSAFILKSAM 248 (264)
Q Consensus 209 ~~f~fs~~~i~~LK~~~~~~~~~~~St~dal~A~iW~~~~ 248 (264)
...++-+++|++||..+.+ +...+|+|-+.|.
T Consensus 16 vvvrlypdeiealksrvpa--------ntsmsayirriil 47 (53)
T 2kke_A 16 VVVRLYPDEIEALKSRVPA--------NTSMSAYIRRIIL 47 (53)
T ss_dssp EEEEECHHHHHHHHTTCCS--------SSCHHHHHHHHHH
T ss_pred eEEEeChhHHHHHHhcCCC--------cccHHHHHHHHHH
Confidence 4556779999999998764 3346777777654
No 20
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=23.14 E-value=49 Score=23.94 Aligned_cols=47 Identities=17% Similarity=0.263 Sum_probs=31.9
Q ss_pred ccCCCCCccEEEEecCCCCCCCchhhHHHHHHHHHhhccccCCccceec-----CceEEe
Q 040598 31 QLTPTTFSPLILFYPMRNTHLKGTQISTQLKESLSKTLDPLYPFAARVR-----ENLIIN 85 (264)
Q Consensus 31 ~~~~~~y~~~i~~f~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~lAGrl~-----~~~~i~ 85 (264)
++|...---+...|+.+ ..+.|+++|.+.+.+-.-+||.+. ++++|.
T Consensus 76 ~imgsgsgvm~i~f~gd--------dlea~ekalkemirqarkfagtvtytl~gn~l~i~ 127 (170)
T 4hhu_A 76 QIMGSGSGVMVIVFEGD--------DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIV 127 (170)
T ss_dssp EEECTTCCEEEEEEECS--------CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEE
T ss_pred EEEeCCceEEEEEEecC--------cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEE
Confidence 34443334455666643 378899999999999889999976 355554
No 21
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=21.24 E-value=52 Score=21.03 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=24.4
Q ss_pred hHHHHHHHHHhhccccCCccceec-----CceEEec
Q 040598 56 ISTQLKESLSKTLDPLYPFAARVR-----ENLIIND 86 (264)
Q Consensus 56 ~~~~Lk~sL~~~L~~~p~lAGrl~-----~~~~i~c 86 (264)
..+.++++|.+.+.+-.-+||.+. +.++|+.
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleiri 46 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRI 46 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEE
Confidence 478888999999999999999986 3566643
No 22
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=21.16 E-value=29 Score=28.28 Aligned_cols=24 Identities=0% Similarity=-0.164 Sum_probs=19.2
Q ss_pred hHHHHHHHHHhhccccCCccceec
Q 040598 56 ISTQLKESLSKTLDPLYPFAARVR 79 (264)
Q Consensus 56 ~~~~Lk~sL~~~L~~~p~lAGrl~ 79 (264)
....+-.+++++|..||.+-.++.
T Consensus 68 ~~~~~ikAv~~Al~~~P~~Na~~~ 91 (239)
T 3b8k_A 68 VNDFIIKASALACLKVPEANSSWM 91 (239)
T ss_dssp HHHHHHHHHHHHHHHCCCSCTTSC
T ss_pred HHHHHHHHHHHHHHhChHhhEEEE
Confidence 344567788999999999988876
Done!